BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780384|ref|YP_003064797.1| serralysin [Candidatus
Liberibacter asiaticus str. psy62]
(665 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780384|ref|YP_003064797.1| serralysin [Candidatus Liberibacter asiaticus str. psy62]
gi|254040061|gb|ACT56857.1| serralysin [Candidatus Liberibacter asiaticus str. psy62]
Length = 665
Score = 1370 bits (3545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/665 (100%), Positives = 665/665 (100%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG
Sbjct: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
Query: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL
Sbjct: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC
Sbjct: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK
Sbjct: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG
Sbjct: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS
Sbjct: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG
Sbjct: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF
Sbjct: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF
Sbjct: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK
Sbjct: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
Query: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI
Sbjct: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
Query: 661 NHDFS 665
NHDFS
Sbjct: 661 NHDFS 665
>gi|315122203|ref|YP_004062692.1| serralysin [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495605|gb|ADR52204.1| serralysin [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 493
Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust.
Identities = 293/438 (66%), Positives = 345/438 (78%), Gaps = 1/438 (0%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
M +IKPVYTTE IAD+LLRD YW+NYF++Y+P V T HRLSFD+TELN N QE+ RWA
Sbjct: 1 MDDIKPVYTTESIADYLLRDSYWANYFLKYQPTVYTDHRLSFDVTELNANGQEIVRWAFR 60
Query: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
EWSKVV++TFEETS SDI+F S++ GY+C P+ + RYFMEIN D DV YGI KGTIL
Sbjct: 61 EWSKVVNITFEETSNLSDIQFKSNDFGYICIPKNNFRYFMEINLDARDVDFYGIDKGTIL 120
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGY 179
SHNA+HEIGHALGL+H G YNGG P YGVDN Y NDSFLTSVMSYF ++ DASFGY
Sbjct: 121 SHNAIHEIGHALGLLHAGPYNGGSPTYGVDNQYANDSFLTSVMSYFDQNENRTTDASFGY 180
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
CATPMV+DIVAVQKIYGAPK +G+ I+KIEV+Q SPFIQTIYDSGG DLLD+ +G
Sbjct: 181 CATPMVADIVAVQKIYGAPKTLVGDTIHKIEVKQGYSPFIQTIYDSGGSDLLDVQSVGTF 240
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
NYIDLN ESWSSIGGY+KN+TIA+ T+IESV+G +GND +IGNSANN F+S GND F
Sbjct: 241 DNYIDLNPESWSSIGGYKKNVTIARDTIIESVIGGAGNDTIIGNSANNTLFKSGGNDTFY 300
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G+ G D Y YKIYRF+N I+YD ++ D + DVE LRF++ ID ++KQ+
Sbjct: 301 GADGWDVMVYSMLKNDYKIYRFKNEAIIYDMFRNEVDDIIDVESLRFSNDQIDLADIKQQ 360
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
SILEYTASY DL+Q IG DV S KHF +FGL EGRDITF+ YLYLGSYDDLR VFGSD+
Sbjct: 361 SILEYTASYGDLVQCIGNDVNASKKHFVDFGLREGRDITFNPYLYLGSYDDLRQVFGSDK 420
Query: 420 GAAARHYITHGVKEGRNP 437
+A RHYITHG +EGRNP
Sbjct: 421 DSATRHYITHGFREGRNP 438
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
LEY AS+ DL+ + V K HF +FG EGR +TF+ YLYLGSYDDLR VFGSD
Sbjct: 363 LEYTASYGDLVQCIGND---VNASKKHFVDFGLREGRDITFNPYLYLGSYDDLRQVFGSD 419
Query: 503 RGAAARHYITHGVKEGRNP 521
+ +A RHYITHG +EGRNP
Sbjct: 420 KDSATRHYITHGFREGRNP 438
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 74/122 (60%), Gaps = 10/122 (8%)
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
LEY AS+ DL+ + V A K HF +FG EGR ITFNP LYL SYDDL VFGSD
Sbjct: 363 LEYTASYGDLVQCIGND---VNASKKHFVDFGLREGRDITFNPYLYLGSYDDLRQVFGSD 419
Query: 587 RSAAAQHYITHGMKEGRALGI----SGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTD 642
+ +A +HYITHG +EGR G MQ +LSEKS++ S FD K+ DL +
Sbjct: 420 KDSATRHYITHGFREGRNPGFMYRDDSMQHS--FSLSEKSQEHKYTSTFFDPKE-DLSEN 476
Query: 643 YF 644
+F
Sbjct: 477 FF 478
>gi|328541869|ref|YP_004301978.1| peptidase M10, serralysin-like protein [polymorphum gilvum
SL003B-26A1]
gi|326411620|gb|ADZ68683.1| Peptidase M10, serralysin-like protein [Polymorphum gilvum
SL003B-26A1]
Length = 789
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 227/652 (34%), Positives = 324/652 (49%), Gaps = 72/652 (11%)
Query: 6 PVYTTERIADHLLRDQYWS-NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
PVY+ ++IA H L D YW+ N + R+ +V ++ DIT L + +A AL W+
Sbjct: 30 PVYSNDQIA-HQLTDGYWNHNGYGRHSFNVAPGGSITVDITGLTSAGRSLATQALQAWTD 88
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSH 122
V + F + + + I F +N+G + + + + + + W YG +
Sbjct: 89 VTGINFAQVTGGAQITFDDNNSGAYASTWWSGTTITQASVNISTAWLSAYGTSIDSYSFQ 148
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCA 181
+HEIGHALGL H G+Y+G YGV N Y NDS+ S+MSYF +++ + AS+ Y
Sbjct: 149 TYVHEIGHALGLGHAGNYDGS-ATYGVHNHYANDSWQASIMSYFDQVENTSIAASYAYAI 207
Query: 182 TPMVSDIVAVQKIYGAPKG-SLGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLL 231
TPMV+DI+A+Q +YG P GN +Y + P TIYD+GG D L
Sbjct: 208 TPMVADIIAIQNLYGTPTTIRAGNTVYGDGSTAGGYLDSLTSFSRPVAVTIYDNGGFDTL 267
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ + IDL E SS+ G N+ IA+ TVIE+ +G SGND +IGN+ANN+
Sbjct: 268 NFGTVS-ANQTIDLRAEHVSSVRGLTGNLIIARGTVIENAIGGSGNDTLIGNAANNIL-- 324
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
DG +G DT A ++ F + + A+ D L ++E + F+D
Sbjct: 325 -------DGGAGFDTAHIGASLAGTRVTVFFEGMTL--ASSQGNDVLVNIEMVAFSDTTR 375
Query: 352 DSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + SI Y ASY DLI IG + + H+ F +EGR ITF+ Y+ S+ D
Sbjct: 376 STASFGSSGSIYAYGASYADLITGIGGNALGLLNHYANFAAAEGRSITFNGLSYIASHVD 435
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA--------------- 455
L G++ A HYI+HG EGR F L YIASH DLI A
Sbjct: 436 LIQAHGANATIGALHYISHGYGEGRTI-TFDGLAYIASHADLIQAHGANATIGALHYVSH 494
Query: 456 ---------------FADAPDLV-------QVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
A DL +G +H+ N G EGR + FD+ LYLG+Y
Sbjct: 495 GYGEGRTTSFNGLEYIAAYADLRAAYGTNGSIGAEHYINHGFGEGRGLRFDTRLYLGAYA 554
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA-DAPDLVQAGKD 552
DLR +G+D A H+I HG EGR+ D F AL+YIAS+ DLI + + +Q
Sbjct: 555 DLRAAYGTDINQAVTHFIQHGAAEGRSTDRFSALDYIASYGDLIAVYGTNTAGALQ---- 610
Query: 553 HFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
H+ G+ EGR F+ Y+ SY DL +GSD + H+I HG EGR+
Sbjct: 611 HYYAHGFTEGRGDNFDGLRYIASYADLILAYGSDATQGTTHFIMHGFGEGRS 662
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
LEY A+Y DL G + +H+ G EGR + FD+ LYLG+Y DLR +G+D
Sbjct: 507 LEYIAAYADLRAAYGTNGSIGAEHYINHGFGEGRGLRFDTRLYLGAYADLRAAYGTDINQ 566
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA-DAPDLVQVGKDHFSNFGCEEGRF 480
A H+I HG EGR+ D F AL+YIAS+ DLI + + +Q H+ G EGR
Sbjct: 567 AVTHFIQHGAAEGRSTDRFSALDYIASYGDLIAVYGTNTAGALQ----HYYAHGFTEGRG 622
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLIN 538
FD Y+ SY DL +GSD H+I HG EGR+ F A YI + + DL+
Sbjct: 623 DNFDGLRYIASYADLILAYGSDATQGTTHFIMHGFGEGRST-LFDAAAYINASGNADLLA 681
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ D H+ GY EGR+++
Sbjct: 682 VYGSNLD---GAVLHYVRHGYFEGRNLS 706
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 74/172 (43%), Gaps = 42/172 (24%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
S L+Y ASY DLI V G + +++H+Y G +EGR FD Y+ SY DL +GSD
Sbjct: 586 SALDYIASYGDLIAVYGTNTAGALQHYYAHGFTEGRGDNFDGLRYIASYADLILAYGSDA 645
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
H+I HG EGR+ F A Y INA +A
Sbjct: 646 TQGTTHFIMHGFGEGRST-LFDAAAY-------INASGNA-------------------- 677
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
DL V+GS+ A HY+ HG EGRN + E IA
Sbjct: 678 --------------DLLAVYGSNLDGAVLHYVRHGYFEGRNLSGGGSQEAIA 715
>gi|254501291|ref|ZP_05113442.1| Peptidase M10 serralysin C terminal domain family [Labrenzia
alexandrii DFL-11]
gi|222437362|gb|EEE44041.1| Peptidase M10 serralysin C terminal domain family [Labrenzia
alexandrii DFL-11]
Length = 506
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 217/430 (50%), Gaps = 41/430 (9%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFMEINFD 105
N ++AR AL WS V D+TF+E+ S + I+F +S+ + Y +
Sbjct: 79 FNSQQMDMARLALETWSDVADITFQESNSYFAPIRFANSDT--LADYSAAHAYLPGFSSW 136
Query: 106 KADVW---RYGIGKGTILSHNA----LHEIGHALGLMHPGSYN--GGYPVYGVDNDYEND 156
DVW Y + + +HEIGHA+G HPG YN GG Y + Y D
Sbjct: 137 AGDVWVNSDYAYNTSPEIGNYGYKVLVHEIGHAIGQPHPGDYNASGGKLSYQNNAAYAED 196
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
S S+MSY+ + D + TPM+ DI+A+Q YG + ++ +S
Sbjct: 197 SAQYSIMSYWDESHTGADFGDAFAQTPMLHDILAIQAKYGVNMSTRTDDTVYGFNSNTES 256
Query: 217 PF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
P + +I+D+GG D +D + V I+LN +SS G N++IA V
Sbjct: 257 PIYDFSQNTAPVFSIWDAGGIDTIDFSGYF-VDTVINLNEGGFSSAAGLTNNISIAYGAV 315
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVF---DGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ +G +G+DVVIGN +N+ +G+DVF SS DT Y F+N
Sbjct: 316 IENAIGGAGDDVVIGNQWDNLVDAGAGSDVFVLNQSSSSADT------------YVFDNG 363
Query: 325 -IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
IV+ ++H D L++VE + +AD +D + Q SILEY ASYED+ + G D
Sbjct: 364 ETIVF--SDHGTDRLTNVEIIFYADAELDVIAQTQVSILEYAASYEDVEEAFGTDEEALF 421
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
HF EFGL+EGR I F + Y+ S++DL VFG+D A ARHYI G E R F +
Sbjct: 422 DHFVEFGLTEGRTIDFSALDYIASHEDLIEVFGADAEAGARHYIEFGRAENREI-TFDSA 480
Query: 444 EYIASHEDLI 453
++ ++ +L+
Sbjct: 481 AFLEANPELV 490
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-ADAPDL 546
Y SY+D+ FG+D A H++ G+ EGR D F AL+YIASHEDLI F ADA
Sbjct: 402 YAASYEDVEEAFGTDEEALFDHFVEFGLTEGRTID-FSALDYIASHEDLIEVFGADA--- 457
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
+AG H+ FG E R ITF+ +L + +L + G + +AA
Sbjct: 458 -EAGARHYIEFGRAENREITFDSAAFLEANPELVPLQGQEINAA 500
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
LEY AS+ED+ AF + + DHF FG EGR + F + Y+ S++DL VFG+D
Sbjct: 400 LEYAASYEDVEEAFGTDEEAL---FDHFVEFGLTEGRTIDFSALDYIASHEDLIEVFGAD 456
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
A ARHYI G E R F + ++ ++ +L+
Sbjct: 457 AEAGARHYIEFGRAENREI-TFDSAAFLEANPELV 490
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
LEY AS+ED+ AF +A DHF FG EGR+I F+ Y+ S++DL VFG+D
Sbjct: 400 LEYAASYEDVEEAFGTDE---EALFDHFVEFGLTEGRTIDFSALDYIASHEDLIEVFGAD 456
Query: 587 RSAAAQHYITHGMKEGRALGISGMQF 612
A A+HYI G E R + F
Sbjct: 457 AEAGARHYIEFGRAENREITFDSAAF 482
>gi|330937697|gb|EGH41595.1| serralysin [Pseudomonas syringae pv. pisi str. 1704B]
Length = 785
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 198/388 (51%), Gaps = 51/388 (13%)
Query: 5 KPVYTTERIADHLLRDQ--------YWSNYF--IRYKPDVLTTHRLSFDITELNPNAQEV 54
K T + HL DQ YW + + ++ DV L+ ++ L+ +AQ V
Sbjct: 23 KQTATNQAALGHLTLDQQANYLTDGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVV 82
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-RYG 113
AR+AL W+ V L F ET+ + I F +G Y + + + A W +YG
Sbjct: 83 ARYALQTWTNVSGLNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDWVKYG 142
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSM 172
+ +HEIGHALGL H G+YNG + + Y+ DS+ SVMSYF +++
Sbjct: 143 L----YYQQTYIHEIGHALGLGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTY 197
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS------PFIQTIYDSG 226
+ASFGY ATPM++DIVA+Q +YG G+N Y ++ + TIYDSG
Sbjct: 198 SNASFGYVATPMLADIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPSLVATIYDSG 257
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D ++++ G + +DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++
Sbjct: 258 GNDTINVSTYAGAQT-VDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASD 316
Query: 287 NVFFESSGN------------------DVFDGSSGLDTFFY------YAPSYLYKIYRFE 322
N ++GN DV +G +G+DT Y Y +Y + R
Sbjct: 317 NFLNANAGNDQLQGGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVR-- 374
Query: 323 NAII-VYDANEHKQDFLSDVERLRFADQ 349
NA + V+DA D LS VERL F+D+
Sbjct: 375 NATLSVHDAQTSDVDTLSSVERLSFSDR 402
>gi|289677888|ref|ZP_06498778.1| serralysin [Pseudomonas syringae pv. syringae FF5]
Length = 691
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 198/388 (51%), Gaps = 51/388 (13%)
Query: 5 KPVYTTERIADHLLRDQ--------YWSNYF--IRYKPDVLTTHRLSFDITELNPNAQEV 54
K T + HL DQ YW + + ++ DV L+ ++ L+ +AQ V
Sbjct: 23 KQTATNQAALGHLTLDQQANYLTNGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVV 82
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-RYG 113
AR+AL W+ V L F ET+ + I F +G Y + + + A W +YG
Sbjct: 83 ARYALQTWTNVSGLNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDWVKYG 142
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSM 172
+ +HEIGHALGL H G+YNG + + Y+ DS+ SVMSYF +++
Sbjct: 143 L----YYQQTYIHEIGHALGLGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTY 197
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP------FIQTIYDSG 226
+ASFGY ATPM++DIVA+Q +YG G+N Y ++ + TIYDSG
Sbjct: 198 SNASFGYVATPMLADIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSG 257
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D ++++ G + +DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++
Sbjct: 258 GNDTINVSTYVGAQT-VDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASD 316
Query: 287 NVFFESSGN------------------DVFDGSSGLDTFFY------YAPSYLYKIYRFE 322
N ++GN DV +G +G+DT Y Y +Y + R
Sbjct: 317 NFLNANAGNDQLQGGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVR-- 374
Query: 323 NAII-VYDANEHKQDFLSDVERLRFADQ 349
NA + V+DA D LS VERL F+D+
Sbjct: 375 NATLSVHDAQTSDVDTLSSVERLSFSDR 402
>gi|66047210|ref|YP_237051.1| serralysin [Pseudomonas syringae pv. syringae B728a]
gi|63257917|gb|AAY39013.1| Serralysin [Pseudomonas syringae pv. syringae B728a]
Length = 785
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 195/387 (50%), Gaps = 49/387 (12%)
Query: 5 KPVYTTERIADHLLRDQ--------YWSNYF--IRYKPDVLTTHRLSFDITELNPNAQEV 54
K T + HL DQ YW + + ++ DV L+ ++ L+ +AQ V
Sbjct: 23 KQTATNQAALGHLTLDQQAYYLTDGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVV 82
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-RYG 113
AR+AL W+ V L F ET+ + I F +G Y + + + A W +YG
Sbjct: 83 ARYALQTWTNVSGLNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDWVKYG 142
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSM 172
+ +HEIGHALGL H G+YNG + + Y+ DS+ SVMSYF +++
Sbjct: 143 L----YYQQTYIHEIGHALGLGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTY 197
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP------FIQTIYDSG 226
ASFGY ATPM++DIVA+Q +YG G+N Y ++ + TIYDSG
Sbjct: 198 SSASFGYVATPMLADIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSG 257
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D ++++ G + +DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++
Sbjct: 258 GNDTINVSTYVGAQT-VDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASD 316
Query: 287 NVFFESSGN------------------DVFDGSSGLDTFFY------YAPSYLYKIYRFE 322
N ++GN DV +G +G+DT Y Y +Y + R
Sbjct: 317 NFLNANAGNDQLQGGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVR-N 375
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQ 349
+ V+DA D LS VERL F+D+
Sbjct: 376 GTLSVHDAQTSDVDTLSSVERLSFSDR 402
>gi|330981485|gb|EGH79588.1| serralysin [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 785
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 198/388 (51%), Gaps = 51/388 (13%)
Query: 5 KPVYTTERIADHLLRDQ--------YWSNYF--IRYKPDVLTTHRLSFDITELNPNAQEV 54
K T + HL DQ YW + + ++ DV L+ ++ L+ +AQ V
Sbjct: 23 KQTATNQAALGHLTLDQQANYLTNGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVV 82
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-RYG 113
AR+AL W+ V L F ET+ + I F +G Y + + + A W +YG
Sbjct: 83 ARYALQTWTNVSGLNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDWVKYG 142
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSM 172
+ +HEIGHALGL H G+YNG + + Y+ DS+ SVMSYF +++
Sbjct: 143 L----YYQQTYIHEIGHALGLGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTY 197
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP------FIQTIYDSG 226
+ASFGY ATPM++DIVA+Q +YG G+N Y ++ + TIYDSG
Sbjct: 198 SNASFGYVATPMLADIVAIQSLYGPAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSG 257
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D ++++ G + +DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++
Sbjct: 258 GNDTINVSTYVGAQT-VDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASD 316
Query: 287 NVFFESSGN------------------DVFDGSSGLDTFFY------YAPSYLYKIYRFE 322
N ++GN DV +G +G+DT Y Y +Y + R
Sbjct: 317 NFLNANAGNDQLQGGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVR-- 374
Query: 323 NAII-VYDANEHKQDFLSDVERLRFADQ 349
NA + V+DA D LS VERL F+D+
Sbjct: 375 NATLSVHDAQTSDVDTLSSVERLSFSDR 402
>gi|288958036|ref|YP_003448377.1| secreted protease [Azospirillum sp. B510]
gi|288910344|dbj|BAI71833.1| secreted protease [Azospirillum sp. B510]
Length = 526
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 234/495 (47%), Gaps = 54/495 (10%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETS--IHSDIKFISSNNG--------YVCTPRYDS 96
+N + R AL WS V +++F E S ++I F ++ Y T
Sbjct: 61 MNTAQRTAVRQALAAWSAVANISFVEISDAASAEIAFGTNRQSGRSAAYAYYPSTGSQGG 120
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY--- 153
+ F+ D A G + ++ +HEIGHALGL HPG+Y+ G G + Y
Sbjct: 121 QVFLA--NDSAGNTNPTTGSYSYMT--VIHEIGHALGLKHPGNYDAGSGS-GTEGPYLPA 175
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D++ S+MSY +S + S GY P + DI A+Q +YGA + G+ Y +
Sbjct: 176 ATDNYAYSIMSY--NANSRLP-SGGYLTGPSLYDIAAIQYLYGANMSAAPGDTSYTLNTA 232
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---IDLNTESWSSIGGYEKNMTIAQHTVIE 269
T++D G + L+ G + +DL +SS GG + +A T I+
Sbjct: 233 S-----FTTLWDPNGRNSLN----GSAQTTSLSLDLRGGQFSSAGG-TTFLALAYGTRIQ 282
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVY 328
+ G SGND N+ DV DG +G DT + Y++ +F+ + IV
Sbjct: 283 AATGGSGNDTFTVNTLG---------DVLDGGAGTDTVVFSGSRAQYRVQQFDGSRYIVS 333
Query: 329 DANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
A+ + L+++E LRF+D + S + L Y AS DLI +G + +H
Sbjct: 334 GADGNA--LLTNIEFLRFSDGTTALSSASSGSFDALRYIASSADLIGALGANAAAGTQHL 391
Query: 387 YEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
GL EGR +T FD Y Y+ Y DL N FG+D AA H+I +G +EGR F L Y
Sbjct: 392 ISSGLYEGRSLTGFDPYNYIAGYVDLMNAFGADTTAATSHFIAYGYREGRGSTLFDTLSY 451
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLRNVFGSDRG 504
AS+ DLI AF + + V++ H+ G EGR +T F++ YL + D+ G
Sbjct: 452 EASNPDLIVAFGNNREAVEL---HYIVSGRFEGRSLTRFNAAAYLAANPDVNAAVGGSLA 508
Query: 505 AAARHYITHGVKEGR 519
A +HY++ G EGR
Sbjct: 509 GARQHYVSSGFAEGR 523
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 91/170 (53%), Gaps = 8/170 (4%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLRN 497
+F AL YIAS DLI A G H + G EGR +T FD Y Y+ Y DL N
Sbjct: 363 SFDALRYIASSADLIGALGAN---AAAGTQHLISSGLYEGRSLTGFDPYNYIAGYVDLMN 419
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
FG+D AA H+I +G +EGR F L Y AS+ DLI AF + + V+ H+
Sbjct: 420 AFGADTTAATSHFIAYGYREGRGSTLFDTLSYEASNPDLIVAFGNNREAVEL---HYIVS 476
Query: 558 GYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
G EGRS+T FN YL + D+ G + A QHY++ G EGRALG
Sbjct: 477 GRFEGRSLTRFNAAAYLAANPDVNAAVGGSLAGARQHYVSSGFAEGRALG 526
>gi|294675715|ref|YP_003576330.1| M10 family peptidase [Rhodobacter capsulatus SB 1003]
gi|294474535|gb|ADE83923.1| peptidase, M10 family [Rhodobacter capsulatus SB 1003]
Length = 586
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 165/322 (51%), Gaps = 30/322 (9%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T + +AD+L+ + SN D + + ++ D+ L + Q++ARWAL WS V +L
Sbjct: 139 TIDDLADYLVNGYWESNGGQARSFDTTSDNVITVDLHNLTADGQQLARWALQAWSAVANL 198
Query: 69 TFEETSIHSDIKFISSNNGYVCT-----PRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
F ET+ +DI+F S++G T R +S + +N D A + YG
Sbjct: 199 VFVETTGTADIEFDDSDDGAYSTSNTTGTRINSSF---VNIDTAWIANYGTTMDGYSLQT 255
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD-ASFGYCAT 182
+HEIGHALGL H G+YNG Y D + NDS+ SVMSYF D+ ASF + +
Sbjct: 256 YIHEIGHALGLGHQGAYNGS-ATYPDDATFPNDSWHLSVMSYFSQDDNTTSGASFAWVMS 314
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYK-------------------IEVQQKDSPFIQTIY 223
M+SDI+A+Q +YGA +LG+ +Y P TIY
Sbjct: 315 AMMSDIIAMQSMYGASTTTLGSTVYGRNSNVGGYLETLFDSLVAGTSATYGGDPVTMTIY 374
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+GG D +D + V ++L S+S++ G N+ IA+ TVIE V +GND+++GN
Sbjct: 375 DAGGRDTIDFSF-SNVNQTLNLAPGSFSNLAGLVGNLGIARGTVIEIGVTGNGNDLIMGN 433
Query: 284 SANNVFFESSGNDVFDGSSGLD 305
+A+N GND G +G D
Sbjct: 434 NASNTLMSRGGNDTLRGGAGND 455
>gi|259414780|ref|ZP_05738703.1| rb139 [Silicibacter sp. TrichCH4B]
gi|259349231|gb|EEW60978.1| rb139 [Silicibacter sp. TrichCH4B]
Length = 660
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 161/330 (48%), Gaps = 31/330 (9%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKP-DVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
V + + +AD L D YW F + D ++++ +IT L Q++ARWA W +V
Sbjct: 151 VASLDEMAD-FLTDGYWQGTFRSGRNFDTSADNQITVNITGLTAAGQQLARWAFEAWERV 209
Query: 66 VDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSH 122
+L F ET +DI F + +G + + + W YG T
Sbjct: 210 ANLEFVETGTGFADITFDDAASGAYAQSVVSGGTILSSVVNVSTSWLSNYGTDIDTYSFQ 269
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD-SMMDASFGYCA 181
+HEIGHALGL H G+YNG YG D + NDS+ SVMSYF D + +ASFGY
Sbjct: 270 TYVHEIGHALGLGHQGAYNG-NATYGTDETFINDSWQLSVMSYFDQVDNTTTNASFGYIV 328
Query: 182 TPMVSDIVAVQKIYGAP---KGSLGNNIYKIEVQQKDS--------------------PF 218
+ M++DIVA+Q +YGAP + G+ + DS F
Sbjct: 329 STMMADIVAIQNLYGAPDEDSETAGDTTWGANTTLTDSYLSEVFGALEGDFSFNMTGNDF 388
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
TIYD G D +DL+ + IDLN ES+S + G N+ IA+ TVIE+V+ SGND
Sbjct: 389 ALTIYDVSGTDTIDLSP-NTTNDRIDLNDESFSDVAGRIGNLGIARDTVIENVIAGSGND 447
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ GN N +G D+ G +G DT F
Sbjct: 448 TITGNEVGNEIHAGNGTDIISGGAGDDTIF 477
>gi|254471210|ref|ZP_05084612.1| secreted alkaline metalloproteinase [Pseudovibrio sp. JE062]
gi|211959356|gb|EEA94554.1| secreted alkaline metalloproteinase [Pseudovibrio sp. JE062]
Length = 530
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 163/314 (51%), Gaps = 16/314 (5%)
Query: 7 VYTTERIADHLLRDQYW-SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
+T ++IA L D YW S R DV L+ ++ LN + +E+A AL W+ V
Sbjct: 142 AFTNDQIAAQL-TDGYWNSTGRGRRAFDVSPGESLTVNLNGLNSSGRELATKALEAWTMV 200
Query: 66 VDLTFEETSIHSDIKFISSNNGYVC--TPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+ F S ++ I F +++G T R + +N V RYG
Sbjct: 201 TGIEFRTVSSNAQITFDDNDSGAYANSTTRGSTILSSTVNVSTDWVARYGTDLDGYAFQT 260
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCAT 182
+HEIGHALGL H G+YNG YGVDN Y NDS+ ++MSYF +++ +DAS Y T
Sbjct: 261 YVHEIGHALGLGHAGNYNGA-ATYGVDNHYSNDSWQATIMSYFDQVENTNVDASRAYVVT 319
Query: 183 PMVSDIVAVQKIYG-APKGSLGNNIYKIEVQQKD--------SPFIQTIYDSGGDDLLDL 233
PM++DI+A+Q +YG A G+ +Y +P TI D+GG+D ++
Sbjct: 320 PMIADILAMQDLYGTATDLRTGSTVYGENSTAGGYYDDIADLNPATFTIMDNGGNDSINF 379
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ + I L E++S + G NMTI + TVIE+ SGND +IGN A+N + ++
Sbjct: 380 SSVR-ADQKISLVAETYSDVNGLTGNMTIMRDTVIENAYSGSGNDELIGNDADNGLYANA 438
Query: 294 GNDVFDGSSGLDTF 307
GND +G G DT
Sbjct: 439 GNDTLEGGLGDDTL 452
>gi|254464133|ref|ZP_05077544.1| serralysin [Rhodobacterales bacterium Y4I]
gi|206685041|gb|EDZ45523.1| serralysin [Rhodobacterales bacterium Y4I]
Length = 1158
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 41/326 (12%)
Query: 5 KPVYTTERIADHLLRDQYWSNYFIRYKP-DVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP YT ++IA +L + +W + + DV T +L+ +++ LN +E AR AL W+
Sbjct: 33 KPTYTVDQIAQYLYK-GFWEDTGRTQRSFDVQTGGQLTVNLSGLNATGKETARKALESWT 91
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+ + F ET+ + I F +N+G + + + + + D W G
Sbjct: 92 ALTGIEFAETTGSAKITFDDNNSGAYASSTVSNGTILSSHINVDDGWSA---YGNYYLQT 148
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCAT 182
+HEIGHALGL H G+YNG YG D + NDS+ S+MSYF +++ +DASF Y AT
Sbjct: 149 FIHEIGHALGLGHTGNYNG-SASYGSDAHFANDSWQMSIMSYFSQSENTAVDASFAYLAT 207
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI--QT---------------IYDS 225
++DI AV +YG P + V+ D+ + QT I DS
Sbjct: 208 AQLADIAAVHHLYGTP----------VNVETGDTTYGDGQTTGRFGMDLNGGWAVAIVDS 257
Query: 226 GGDDLLDLTLIGGVKNY---IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
GG D+++L G ++Y ++LN ++SS+ G N +IA TVIE+ + SG D + G
Sbjct: 258 GGTDVINL----GSRSYNQTLNLNAGTFSSLNGKTGNFSIASGTVIENAITGSGIDSITG 313
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFF 308
N+A+NV +GND G DT
Sbjct: 314 NAADNVLDSGAGNDQISAGGGNDTLI 339
>gi|32456012|ref|NP_862014.1| rb139 [Ruegeria sp. PR1b]
gi|22726364|gb|AAN05160.1| RB139 [Ruegeria sp. PR1b]
Length = 643
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 160/326 (49%), Gaps = 29/326 (8%)
Query: 9 TTERIADHLLRDQYWSNYF-IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
T + +A++L D YW + F R+ D + ++ +++ L+ AQ++ARWA W V D
Sbjct: 164 TLDEMAEYL-TDGYWEDSFDSRHSFDTSDSTEITVNLSALSSGAQQLARWAFEAWELVAD 222
Query: 68 LTFEETSIHS-DIKFISSNNGYVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNA 124
L F ETS + DI F +++G T E+N + V YG +
Sbjct: 223 LEFVETSSSNVDILFRDNDSGAYATSSTSGGTIQSSEVNISQNWVSTYGSTISSYTFSTY 282
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM-MDASFGYCATP 183
+HEIGHALGL H G YNG +YGVD + DS+ SVMSYF +D+ +DAS+ A+
Sbjct: 283 IHEIGHALGLGHQGDYNG-NAIYGVDETFALDSYQLSVMSYFSQEDNTEVDASYAEPASA 341
Query: 184 MVSDIVAVQKIYGAP---KGSLGNNIYKIE------------------VQQKDSPFIQTI 222
M++DI+A+Q++YGA S GN I+ D P TI
Sbjct: 342 MMTDIIAIQELYGAAGRNSASAGNTIWGANGTLDGYLADVFDGWGGSNANLGDEPVTITI 401
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
YD G D+LDL+ + + S I G N+ IA+ TVIE GND VIG
Sbjct: 402 YDRDGIDMLDLSNNNSNNRLDLNDATA-SDINGLIGNLLIARDTVIEKAKMGRGNDTVIG 460
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFF 308
N ANN GND G +G D F
Sbjct: 461 NEANNRLLGGGGNDALSGGAGQDKMF 486
>gi|32456013|ref|NP_862015.1| rb140 [Ruegeria sp. PR1b]
gi|22726365|gb|AAN05161.1| RB140 [Ruegeria sp. PR1b]
Length = 509
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 150/293 (51%), Gaps = 24/293 (8%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRY 94
++ H ++ D+T L Q +ARWAL W +V DL F E + DI F S++G T +
Sbjct: 94 ISAHVITVDLTALTSTGQRLARWALDSWEQVADLHFTEVTRGGDITFDDSDSGAYSTSSF 153
Query: 95 D---SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
D + +N + + YG + +HEIGHALGL H G+YNG
Sbjct: 154 DEDGNTLAATVNISQDWLATYGTTLASYSMTTFVHEIGHALGLGHLGNYNGSTGT----Q 209
Query: 152 DYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-----------K 199
Y NDS+ SVMSY ++S + A + + + PM++DIVA+Q +YG P +
Sbjct: 210 IYANDSWQLSVMSYIAQSENSNVSADYAFPSGPMMADIVAIQSLYGTPIESDDGDSTWGQ 269
Query: 200 GSLGNNIYKIEVQQKDSPFIQ----TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + + P I+ TIYD GG D+LDL+ + ++LN +S++ G
Sbjct: 270 GGTYSRYFTTLFASITDPTIEPIAFTIYDVGGTDMLDLSG-SRTADVVNLNAGGFSNVAG 328
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N+ IA TVIE++ GND V GN+A+NV +G D+ G SG D F
Sbjct: 329 HIGNLAIASGTVIENIKVGRGNDTVYGNAADNVIRGQTGWDLLHGGSGRDRIF 381
>gi|296533245|ref|ZP_06895863.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266431|gb|EFH12438.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 636
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 156/520 (30%), Positives = 228/520 (43%), Gaps = 76/520 (14%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVY-GVDNDYENDSF-----LTSVMSYFM-----PQDSMM 173
+HEIGH LGL HP GG V+ GV++ +E F + ++MSY P +
Sbjct: 148 IHEIGHGLGLAHPHDDGGGSTVFPGVEDSWETGEFDLNQGVWTMMSYVRGWATGPDGPPV 207
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+G+ TPM DI +Q YGA + G++IY++ I+D+GGDD +
Sbjct: 208 LPEYGHSMTPMAFDIAVLQARYGANTTYATGDDIYELWDTDGPGTGYAAIWDAGGDDAIR 267
Query: 233 LTLIGGVKNYIDLN--TESWSSIGG--------YEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ G +DL T W+ GG TIA VIE + +GND + G
Sbjct: 268 YS--GARDAVVDLRAATLEWAPGGGGFVSYVSGVHGGYTIAHGVVIEVALLGAGNDRITG 325
Query: 283 NSANNVFFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
N A+N+FF SGND+ DG G + F + + L R+ N +I+ D E QD L ++
Sbjct: 326 NDADNLFFGGSGNDMIDGGGGRNAAGFTTSFTELASFGRYGNTVIL-DGPE-GQDTLVNI 383
Query: 342 ERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
RL FAD I+ L Y D + + G + E HF +G EGRD F
Sbjct: 384 HRLMFADGTIELDRGSPLVDPLHYYFDNRD-VWLAGMNAEE---HFASYGWREGRDPNF- 438
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
Y + SY + + HY+ +G +EGR+P A F Y+A + D+ A +
Sbjct: 439 -YFSVSSYLAVNQDVAAAGLNPLEHYLDYGWREGRDPSAWFDTDLYLARNPDVAAAGLN- 496
Query: 460 PDLVQVGKDHFSNFGCEEGRFV----------TFDSYLYLGSYDDLRNVFGSDRGAAARH 509
P L H+ +G E R FD+ YL + D+ G D A +H
Sbjct: 497 PLL------HYLTYGQNEQRSSFQALGKEIRDGFDAEFYLLANPDVARA-GID---ARQH 546
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAP------DLVQAGKDHFSNFGYEEGR 563
Y G +E R+P+ + + EY + A P D + G+D F E GR
Sbjct: 547 YEEFGWREERSPNGWFSTEYYLDMNPDVAAAGINPLAHYHTDGWREGRDPSPLF--ETGR 604
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ NPD+ D L +HY+ G+ EGR
Sbjct: 605 YLANNPDVAAAGIDPL------------EHYLRFGLAEGR 632
>gi|288963038|ref|YP_003453317.1| hypothetical protein AZL_f00130 [Azospirillum sp. B510]
gi|288915290|dbj|BAI76773.1| hypothetical protein AZL_f00130 [Azospirillum sp. B510]
Length = 905
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 133/246 (54%), Gaps = 8/246 (3%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
S L Y ASY DL V G D H+ G +EGR ++FD Y+ SY DL N FG++
Sbjct: 641 SPLAYIASYADLSAVFGTDAAAGAAHYIANGRAEGRTVSFDPLAYIASYGDLANAFGANG 700
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
A A HYI +G +EGR +F L YIAS+ DL N F G H+ G EGR
Sbjct: 701 DAGAAHYIANGRREGRTV-SFDPLAYIASYGDLANVFGAN---GGAGAAHYIANGRAEGR 756
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
V+FD YL SY DL FG+DR +A HYIT+G EGR F L Y+A++ DL A
Sbjct: 757 TVSFDPLAYLASYGDLAAAFGADRRSAEIHYITNGRVEGRTV-TFNPLAYLAANADLAAA 815
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
F D +A + H+ G EGR TF+ YL + D+ G D +AA +HYI +G
Sbjct: 816 F--GADSGRA-ELHYLGTGRTEGRRTTFDAGAYLAANGDVAAATGGDLNAAMRHYILYGR 872
Query: 600 KEGRAL 605
EGR L
Sbjct: 873 LEGRML 878
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 116/206 (56%), Gaps = 10/206 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F Y+ SY DL VFG+D A A HYI +G EGR +F L YIAS+ DL NAF
Sbjct: 640 FSPLAYIASYADLSAVFGTDAAAGAAHYIANGRAEGRTV-SFDPLAYIASYGDLANAFGA 698
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
D G H+ G EGR V+FD Y+ SY DL NVFG++ GA A HYI +G EG
Sbjct: 699 NGD---AGAAHYIANGRREGRTVSFDPLAYIASYGDLANVFGANGGAGAAHYIANGRAEG 755
Query: 519 RNPDAFKALEYIASHEDLINAF-ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
R +F L Y+AS+ DL AF AD ++ + H+ G EGR++TFNP YL +
Sbjct: 756 RTV-SFDPLAYLASYGDLAAAFGADR----RSAEIHYITNGRVEGRTVTFNPLAYLAANA 810
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGR 603
DL FG+D A HY+ G EGR
Sbjct: 811 DLAAAFGADSGRAELHYLGTGRTEGR 836
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
F L YIAS+ DL F D + +N G EGR V+FD Y+ SY DL N F
Sbjct: 640 FSPLAYIASYADLSAVFGT--DAAAGAAHYIAN-GRAEGRTVSFDPLAYIASYGDLANAF 696
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G++ A A HYI +G +EGR +F L YIAS+ DL N F AG H+ G
Sbjct: 697 GANGDAGAAHYIANGRREGRTV-SFDPLAYIASYGDLANVFGAN---GGAGAAHYIANGR 752
Query: 560 EEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
EGR+++F+P YL SY DL FG+DR +A HYIT+G EGR +
Sbjct: 753 AEGRTVSFDPLAYLASYGDLAAAFGADRRSAEIHYITNGRVEGRTV 798
>gi|296535274|ref|ZP_06897481.1| peptidase [Roseomonas cervicalis ATCC 49957]
gi|296264395|gb|EFH10813.1| peptidase [Roseomonas cervicalis ATCC 49957]
Length = 646
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 184/682 (26%), Positives = 290/682 (42%), Gaps = 140/682 (20%)
Query: 9 TTERIADHLLRDQYWSNYFIRYK----PDVLTTHRLSFDITELNPNAQEVA---RWAL-G 60
T +R D +L W + Y D + + D+ E P ++A R+ L
Sbjct: 10 TGDRNIDAVLWGVRWKATELTYSFPEDADGYSGEEPNIDLAEFQPVTADLADAIRFILET 69
Query: 61 EWSKVVDLTFEETSIHSDI-----KFISSNNGYVCTPRYDSR------YFMEINFDKADV 109
++ V LTF E + SD S + PR+ +F + F+ A +
Sbjct: 70 QFPAVAQLTFREVAPGSDSMLTFGTLTSEETAHANIPRFSPDSYAGDIWFNQQQFNLAPI 129
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV-YGVDN---DYENDSFLTSVMSY 165
G+ A+HEIGH+LGL H ++GG PV YGV + DS S+M+Y
Sbjct: 130 -------GSYAYFTAMHEIGHSLGLKH--GHDGGSPVEYGVSTLPLTADRDSVEFSIMTY 180
Query: 166 FMPQD-------SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
P ++ D S Y TPM+ DI A+Q +YGA + + G+ +Y+ +
Sbjct: 181 -RPYTAANFEYYTIPDGS--YPQTPMMYDIAALQYLYGANYETNAGDTVYRFDRDTGEMS 237
Query: 214 -----KDSP----FIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYEK- 258
+ +P ++TI+D GG+D D + NY IDL+ W+ +G ++
Sbjct: 238 VNGVGQGAPSANVILRTIWDGGGNDTYDFS------NYEADLRIDLSPGGWTVLGTEQRA 291
Query: 259 ---NMTIAQ-------------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
M +AQ ++IE+ +G SG+D + GN A+N G ++ DG
Sbjct: 292 TMGQMEVAQAHLYNALLYQDDPRSLIENAIGGSGDDTIFGNGADNRLEGGLGTNILDGRG 351
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRS 360
G DT A + Y FE + ++ + K D +E F+D + D
Sbjct: 352 GFDTAV-IAAALTDITYSFEGRYLAFERPDEKGDLAIRIEAFAFSDGTVIRDDGFALLDD 410
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSD 418
+ YT +++ I + G D + H+ G EGRD F + +YL D+ G D
Sbjct: 411 LYYYTQNHD--IWLAGAD---AEAHYAASGWREGRDPNAFFSTAVYLAMNPDVAAA-GID 464
Query: 419 RGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+HY G KE R+P AF Y+A + D+ A + +H+ +G E
Sbjct: 465 ---PLQHYREFGWKELRDPSAAFDTGAYLARYTDVAAAGINP-------LEHYLAYGQAE 514
Query: 478 GRF----------VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKA 526
GR + FD+ YL S D+ S G HY T G +EGR+P+A F
Sbjct: 515 GRLPLPVVGELNVIGFDASYYLLSNLDVLQAGLSAWG----HYSTQGWREGRDPNAYFDT 570
Query: 527 LEYIASHEDLINAFADAPDLVQAGKD---HFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
Y+ S+ PD+ AG D H+ G+ EGR+ + F+ YL +Y D+
Sbjct: 571 SLYLESN----------PDVAAAGMDPLQHYHESGWREGRTPSERFDGAAYLAAYADI-- 618
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
+ H++ +G EGR
Sbjct: 619 --AEGQYDPLLHFLKYGRDEGR 638
>gi|330898466|gb|EGH29885.1| serralysin [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 440
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 159/304 (52%), Gaps = 41/304 (13%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVW-RYGIGKGTILSHNALHEIGHALGLMHP 137
I F +G Y + + + A W +YG+ +HEIGHALGL H
Sbjct: 10 INFSEQKSGAYSNSNYAGSIISDSSVNIASDWVKYGL----YYQQTYIHEIGHALGLGHA 65
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G+YNG + + Y+ DS+ SVMSYF +++ +ASFGY ATPM++DIVA+Q +YG
Sbjct: 66 GNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPMLADIVAIQSLYG 124
Query: 197 APKGSLGNNIYKIEVQQKDSP------FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+N Y ++ + TIYDSGG+D ++++ G + +DL +E++
Sbjct: 125 TAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGAQT-VDLRSEAF 183
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--------------- 295
SS+ G N+ IA+ TVIE+ + +G D +IGN+++N ++GN
Sbjct: 184 SSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQGGDGNDRLMGG 243
Query: 296 ---DVFDGSSGLDTFFY------YAPSYLYKIYRFENAII-VYDANEHKQDFLSDVERLR 345
DV +G +G+DT Y Y +Y + R NA + V+DA D LS VERL
Sbjct: 244 AGSDVLNGGNGIDTALYTEAGARYFATYDTALVR--NATLSVHDAQTSDVDTLSSVERLS 301
Query: 346 FADQ 349
F+D+
Sbjct: 302 FSDR 305
>gi|77463798|ref|YP_353302.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides 2.4.1]
gi|77388216|gb|ABA79401.1| Neutral zinc metallopeptidase [Rhodobacter sphaeroides 2.4.1]
Length = 531
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 175/396 (44%), Gaps = 31/396 (7%)
Query: 7 VYTTERIADHLLRDQYWSN--YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
V + IAD L+ YW + + IR + DV L+ +++ L + Q +AR AL W+
Sbjct: 45 VASMREIADQLV-SGYWRSEGHSIR-RFDVEPGDTLNVNLSGLTADGQRLARAALDTWAD 102
Query: 65 VVDLTFEET-----SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR--YGIGKG 117
V L F ++H I NG T ++ N + W YG
Sbjct: 103 VTGLKFNTAPRFGATVH--IVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLN 160
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDAS 176
+ +HEIGHALGL H G+YNG Y D + NDS+ SVMSYF ++S +DA
Sbjct: 161 SYSLQTFIHEIGHALGLGHAGNYNGSAD-YASDALFLNDSWQASVMSYFSQTENSYIDAD 219
Query: 177 FGYCATPMVSDIVAVQKIYGAP-----------KGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ TPM++DI+A+Q +YG P GS +Y P TI+D
Sbjct: 220 KAFVVTPMIADILAIQTLYGTPGGLRADNTVYGTGSTAGGMYDRAATMTADPVAWTIFDQ 279
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D LDL IDL + S I G + N++IA TVIE+ G SGND +IGN
Sbjct: 280 GGWDRLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGV 338
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NV G+D+ G +G D Y L +I I + ++VE L
Sbjct: 339 ANVLNGGGGSDIMRGGAGND---IYHSDGLDRIVELPGQGIDRVISTASCTLAANVENLT 395
Query: 346 FA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A + I +++ A+ L G D F
Sbjct: 396 LAGGRSISGTGNGLANVIAGNAAANRLTGGAGADSF 431
>gi|332558673|ref|ZP_08412995.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides WS8N]
gi|332276385|gb|EGJ21700.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides WS8N]
Length = 531
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 175/396 (44%), Gaps = 31/396 (7%)
Query: 7 VYTTERIADHLLRDQYWSN--YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
V + IAD L+ YW + + IR + DV L+ +++ L + Q +AR AL W+
Sbjct: 45 VASMREIADQLV-SGYWRSEGHSIR-RFDVEPGDTLNVNLSGLTADGQRLARAALDTWAD 102
Query: 65 VVDLTFEET-----SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR--YGIGKG 117
V L F ++H I NG T ++ N + W YG
Sbjct: 103 VTGLKFNTAPRFGATVH--IVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLN 160
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDAS 176
+ +HEIGHALGL H G+YNG Y D + NDS+ SVMSYF ++S +DA
Sbjct: 161 SYSLQTFIHEIGHALGLGHAGNYNGSAD-YASDALFLNDSWQASVMSYFSQTENSYIDAD 219
Query: 177 FGYCATPMVSDIVAVQKIYGAP-----------KGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ TPM++DI+A+Q +YG P GS +Y P TI+D
Sbjct: 220 KAFVVTPMIADILAIQTLYGTPGGLRADSTVYGTGSTAGGMYDRAATMTADPVSWTIFDQ 279
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D LDL IDL + S I G + N++IA TVIE+ G SGND +IGN
Sbjct: 280 GGWDRLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGV 338
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NV G+D+ G +G D Y L +I I + ++VE L
Sbjct: 339 ANVLNGGGGSDIMRGGAGND---IYHSDGLDRIVELPGQGIDRVISTASCTLAANVENLT 395
Query: 346 FA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A + I +++ A+ L G D F
Sbjct: 396 LAGGRAISGTGNGLANVITGNAAANRLTGGAGADSF 431
>gi|288958308|ref|YP_003448649.1| hypothetical protein AZL_014670 [Azospirillum sp. B510]
gi|288910616|dbj|BAI72105.1| hypothetical protein AZL_014670 [Azospirillum sp. B510]
Length = 394
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 7/252 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G SGND + G +++ +GN+ DG SG DT ++ + + + ++ VY
Sbjct: 120 DTIRGYSGNDTIFGGGGSDLLDGGAGNNYIDGGSGDDTVQRHSTAASSTTFSYGGSVYVY 179
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D+N + Q L+ VE +RF D+ + + V + Y A+ DL G + ++ H+
Sbjct: 180 DSNGYDQ--LTGVEYIRFTDRTVATSGVSAFDPMSYLAANSDLAAAFGANRTAALNHYLN 237
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G+ E R +TFD+ YL + DL FG++ AA +HYIT+G E RN F A+ YIA+
Sbjct: 238 SGIRERRSVTFDAASYLAANQDLAAAFGANTEAATQHYITNGRLENRNT-TFNAMSYIAA 296
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS-DRGAAA 507
+ DLI AF + H++ G E R V F++ YL Y DLR+ GS + AA
Sbjct: 297 NPDLIQAFGTNTTAAAL---HYATVGRLENRSVNFNATAYLARYSDLRSALGSQNEAAAT 353
Query: 508 RHYITHGVKEGR 519
HYI G +EGR
Sbjct: 354 THYILSGFREGR 365
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
R T GV AF + Y+A++ DL AF +H+ N G E R VTF
Sbjct: 198 RTVATSGVS------AFDPMSYLAANSDLAAAFGANR---TAALNHYLNSGIRERRSVTF 248
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D+ YL + DL FG++ AA +HYIT+G E RN F A+ YIA++ DLI AF
Sbjct: 249 DAASYLAANQDLAAAFGANTEAATQHYITNGRLENRNT-TFNAMSYIAANPDLIQAFGTN 307
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEG 602
A H++ G E RS+ FN YL Y DL + GS AAA HYI G +EG
Sbjct: 308 ---TTAAALHYATVGRLENRSVNFNATAYLARYSDLRSALGSQNEAAATTHYILSGFREG 364
Query: 603 RA 604
R+
Sbjct: 365 RS 366
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD YL + DL FG++R AA HY+ G++E R F A Y+A+++DL AF
Sbjct: 208 FDPMSYLAANSDLAAAFGANRTAALNHYLNSGIRE-RRSVTFDAASYLAANQDLAAAFGA 266
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
+A H+ G E R+ TFN Y+ + DL FG++ +AAA HY T G E
Sbjct: 267 N---TEAATQHYITNGRLENRNTTFNAMSYIAANPDLIQAFGTNTTAAALHYATVGRLEN 323
Query: 603 RAL 605
R++
Sbjct: 324 RSV 326
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
R T GV AF + Y+A++ DL AF A +H+ N G E RS+TF
Sbjct: 198 RTVATSGVS------AFDPMSYLAANSDLAAAFGANR---TAALNHYLNSGIRERRSVTF 248
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
+ YL + DL FG++ AA QHYIT+G E R + M +
Sbjct: 249 DAASYLAANQDLAAAFGANTEAATQHYITNGRLENRNTTFNAMSY 293
>gi|126462634|ref|YP_001043748.1| serralysin [Rhodobacter sphaeroides ATCC 17029]
gi|126104298|gb|ABN76976.1| Serralysin [Rhodobacter sphaeroides ATCC 17029]
Length = 531
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 175/396 (44%), Gaps = 31/396 (7%)
Query: 7 VYTTERIADHLLRDQYWSN--YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
V + IAD L+ YW + + IR + DV L+ +++ L + Q +AR AL W+
Sbjct: 45 VASMREIADQLV-SGYWRSEGHSIR-RFDVEPGDTLNVNLSGLTADGQRLARAALDTWAD 102
Query: 65 VVDLTFEET-----SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR--YGIGKG 117
V L F ++H I NG T ++ N + W YG
Sbjct: 103 VTGLKFNTAPRFGATVH--IVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLN 160
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDAS 176
+ +HEIGHALGL H G+YNG Y D + NDS+ SVMSYF ++S +DA
Sbjct: 161 SYSLQTFIHEIGHALGLGHAGNYNGSAD-YASDALFLNDSWQASVMSYFSQTENSYIDAD 219
Query: 177 FGYCATPMVSDIVAVQKIYGAP-----------KGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ TPM++DI+A+Q +YG P GS +Y P TI+D
Sbjct: 220 KAFVVTPMIADILAIQTLYGTPGGLRADSTVYGTGSTAGGMYDRAATLTAEPVAWTIFDQ 279
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D LDL IDL + S I G + N++IA TVIE+ G SGND +IGN
Sbjct: 280 GGWDRLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGV 338
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NV G+D+ G +G D Y L +I I + ++VE L
Sbjct: 339 ANVLNGGGGSDIMRGGAGND---IYHSDGLDRIVELPGQGIDRVISTASCTLAANVENLT 395
Query: 346 FA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A + I +++ A+ L G D F
Sbjct: 396 LAGGRAITGTGNGLANVITGNAAANRLTGGAGADSF 431
>gi|146277440|ref|YP_001167599.1| peptidase M10, serralysin-like protein [Rhodobacter sphaeroides
ATCC 17025]
gi|145555681|gb|ABP70294.1| Peptidase M10, serralysin-like protein [Rhodobacter sphaeroides
ATCC 17025]
Length = 614
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 152/317 (47%), Gaps = 21/317 (6%)
Query: 9 TTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+ ++IA L+ + W R DV L+ D + L + + +A AL WS V
Sbjct: 130 SVQQIATQLVSGYWQWKGAPARAY-DVKPGDTLNVDFSGLTADGKRLATLALQSWSDVTG 188
Query: 68 LTFEETSIHSDIKFISSNN---GYVCTPRYDSRYFMEINFDKADVWR--YGIGKGTILSH 122
+ F I+ ++ G + Y ++ + + W YG +
Sbjct: 189 IRFNTNPARLATVHITMDDVEPGASTSTTYMGSKILKSHVNIGTKWLSDYGTDVNSYSLQ 248
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCA 181
+HE+GHALGL HPG+YNG + YG DN + NDS+ +VMSYF +++ + A +
Sbjct: 249 TYIHELGHALGLGHPGNYNG-WANYGTDNLFLNDSWQATVMSYFSQTENTTIKADRAFVV 307
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNN-----------IYKIEVQQKDSPFIQTIYDSGGDDL 230
TPM++DIVAVQ IYG P G N +Y TIYD GG D+
Sbjct: 308 TPMIADIVAVQMIYGTPSGLRAGNTTYGDNSNAGGMYDRIASLPGREVAWTIYDQGGRDI 367
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LDL + IDL S S++ G N++IAQ TVIE G GNDV+IGNSA+N
Sbjct: 368 LDLRSATAAQ-VIDLRPGSVSNVYGAVGNLSIAQGTVIEVARGGKGNDVIIGNSAHNDLS 426
Query: 291 ESSGNDVFDGSSGLDTF 307
G+D G +G D +
Sbjct: 427 GGGGSDTLRGGAGNDIY 443
>gi|221639650|ref|YP_002525912.1| Serralysin [Rhodobacter sphaeroides KD131]
gi|221160431|gb|ACM01411.1| Serralysin [Rhodobacter sphaeroides KD131]
Length = 531
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 153/324 (47%), Gaps = 27/324 (8%)
Query: 5 KPVYTTERIADHLLRDQYWSN--YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
+ V + IAD L+ YW + + IR + DV L+ +++ L + Q +AR AL W
Sbjct: 43 REVASMREIADQLV-SGYWRSEGHSIR-RFDVEPGDTLNVNLSGLTADGQRLARAALDTW 100
Query: 63 SKVVDLTFEET-----SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR--YGIG 115
+ V L F ++H I NG T ++ N + W YG
Sbjct: 101 ADVTGLKFNTAPRFGATVH--IVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTD 158
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMD 174
+ +HEIGHALGL H G+YNG Y D + NDS+ SVMSYF ++S +D
Sbjct: 159 LNSYSLQTFIHEIGHALGLGHAGNYNGSAD-YASDALFLNDSWQASVMSYFSQTENSYID 217
Query: 175 ASFGYCATPMVSDIVAVQKIYGAP-----------KGSLGNNIYKIEVQQKDSPFIQTIY 223
A + TPM++DI+A+Q +YG P GS +Y P TI
Sbjct: 218 ADKAFVVTPMIADILAIQTLYGTPGGLRADNTVYGTGSTAGGMYDRAATMTADPVAWTIL 277
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D GG D LDL IDL + S I G + N++IA TVIE+ G SGND +IGN
Sbjct: 278 DQGGWDRLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIASGTVIEAARGGSGNDRLIGN 336
Query: 284 SANNVFFESSGNDVFDGSSGLDTF 307
NV G+D+ G +G D +
Sbjct: 337 GVANVLNGGGGSDIMRGGAGNDIY 360
>gi|126741360|ref|ZP_01757036.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
gi|126717565|gb|EBA14291.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
Length = 644
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 156/319 (48%), Gaps = 31/319 (9%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L YW + +++++ +I+ L Q++ARWA W V ++ F ET
Sbjct: 57 NFLTHGYWGGSSRSFNTS--GSNQITVNISGLTAAGQQLARWAFEAWEAVANIDFVETLG 114
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA---LHEIGHAL 132
+ I F +++G + + + + W G TI S++ +HEIGHAL
Sbjct: 115 SAQITFDDNDSGAYASSSTSGTTILSSEVNVSTAWLANSGT-TIDSYSFSTYVHEIGHAL 173
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVAV 191
GL H G YN G YGVD + NDS+ S+MSYF +++ +AS + M+SDIVA+
Sbjct: 174 GLGHQGDYN-GNATYGVDETFSNDSWQVSIMSYFDQSENTTTNASRAALISTMMSDIVAI 232
Query: 192 QKIYGAP---KGSLGNNIYKIEV--------------QQKDSPFIQ-----TIYDSGGDD 229
Q +YGAP + GN + ++S TIYD G D
Sbjct: 233 QNLYGAPGTSSATAGNTTWGANTTLSGYMADAMNALASSRNSSVNGNSVAFTIYDVDGYD 292
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+LDL+ + +DLN E++S + G N+ IA+ T+IE SGND ++GN A N
Sbjct: 293 ILDLSY-NSTNDRVDLNGEAFSDVSGLIGNLGIARGTLIEEFRAGSGNDTIVGNDAANRI 351
Query: 290 FESSGNDVFDGSSGLDTFF 308
+ + G D +G +G DT +
Sbjct: 352 YGNGGTDTIEGGTGYDTLY 370
>gi|254487953|ref|ZP_05101158.1| Ig family protein [Roseobacter sp. GAI101]
gi|214044822|gb|EEB85460.1| Ig family protein [Roseobacter sp. GAI101]
Length = 1075
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 161/312 (51%), Gaps = 16/312 (5%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
PVY+ ++IAD+L + N + DV T L+ D+ L A+ A AL W+ V
Sbjct: 40 PVYSIDQIADYLTVGFWQDNNMSQRSFDVQTGDTLTVDLRALGTVAETTALRALDAWTAV 99
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
L F + S +DI F S+N+G + +E + +D W+ G G +
Sbjct: 100 SGLKFVQGS-SADIVFSSANSGAYNSSTTMGTRIIESRVNISDSWQ---GYGDYYLQTFI 155
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPM 184
HEIGHALGL H G YNG + D + NDS+ T+VMSYF ++ +A+ + A+
Sbjct: 156 HEIGHALGLGHSGMYNG-SASFASDAHFANDSWQTTVMSYFDQNENPNTNATRLFLASAQ 214
Query: 185 VSDIVAVQKIYGAPKG-SLGNNIYKIEVQ------QKDSPFIQTIYDSGGDDLLDLTLIG 237
+ DI A+QK+YGAP + G++IY + + + I D+GG D+++LT
Sbjct: 215 LGDIAAIQKLYGAPTSVATGDSIYGDSANTGQWGMELGTNWSVAIVDNGGTDVINLTSR- 273
Query: 238 GVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
N +DL E++S+I G N++I ++TVIE+ SG+D + GN A N +GND
Sbjct: 274 -THNQMLDLRAETYSNINGRTGNLSIGRNTVIENATTGSGHDYIFGNDAGNRISSGAGND 332
Query: 297 VFDGSSGLDTFF 308
G+ G D
Sbjct: 333 TILGNGGDDVLI 344
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 178 GYCATPMVSDIVAVQKIYGAP------KGSLGNNIYKIE-----VQQKDSPFIQTIYDSG 226
G AT V DI+ P GS+ N Y I +D FI I G
Sbjct: 437 GVAATSSVYDIIDASGAPTGPGTGPIPNGSVDTN-YTISNTTMTTWSRDGGFI--IDTDG 493
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+LDL+L+ IDLN+ IG + I T+IE+++ S ND GN ++
Sbjct: 494 GTDVLDLSLVT-YAATIDLNSGVTGRIG--SNKLIIDAGTIIENLILGSKNDRGTGNGSD 550
Query: 287 NVFFESSGNDVFDGSSGLDTFF 308
N+ + GND G +G D
Sbjct: 551 NLIYGMGGNDRLYGMAGNDALI 572
>gi|296532745|ref|ZP_06895427.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266938|gb|EFH12881.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 371
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 171/349 (48%), Gaps = 20/349 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G +G+D + ++ GND +G G DT ++YR+ N ++
Sbjct: 22 DSIAGDAGDDFIEARGGDDRITPGPGNDRVEGGDGRDTVIVSGDISQTEVYRYNNEGVLR 81
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT--ASYEDLIQVIGQDVFESMKHF 386
+ D L DVE ++F S L Y+ ASY DL + G D +HF
Sbjct: 82 GPD--GVDTLLDVEAVQFTGVGGTLEMSDANSFLSYSYIASYGDLTEAYGADAGAGWRHF 139
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDAFKALEY 445
+FG EGR+ITF+ YL + D+ + G++ + ARHY+ +G EGR + F AL Y
Sbjct: 140 RDFGAVEGREITFNGNAYLAANTDVLSALGANADESGARHYLEYGRFEGRTTE-FAALSY 198
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS---- 501
AS+ +LI++F D + HF G EGR ++F+ Y+ SY DL + +G
Sbjct: 199 TASYGELIDSF--GTDTIAA-TAHFVQEGFNEGRGISFNGLEYVASYGDLIDAYGDAERP 255
Query: 502 -DRGA-AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV---QAGKDHFSN 556
D G A HYI +G EGR F L+Y+AS+ D+I AF D+ D G H+
Sbjct: 256 FDLGEDGAGHYIQYGRGEGRET-TFDGLQYMASYGDVIEAFRDSTDAGAYDTIGALHYIR 314
Query: 557 FGYEEGR-SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
G+ E R + FN Y + DL + A A H+I +G ++GRA
Sbjct: 315 DGFGEERVADRFNEQSYAAANGDLAEAGITSADALALHWIQYGYEKGRA 363
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 17/207 (8%)
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAF-ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G E + ++F + YIAS+ DL A+ ADA G HF +FG EGR +TF+ Y
Sbjct: 102 GTLEMSDANSFLSYSYIASYGDLTEAYGADAG----AGWRHFRDFGAVEGREITFNGNAY 157
Query: 489 LGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
L + D+ + G++ + ARHY+ +G EGR + F AL Y AS+ +LI++F D +
Sbjct: 158 LAANTDVLSALGANADESGARHYLEYGRFEGRTTE-FAALSYTASYGELIDSFG--TDTI 214
Query: 548 QAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA------AAQHYITHGMKE 601
A HF G+ EGR I+FN Y+ SY DL + +G A HYI +G E
Sbjct: 215 AA-TAHFVQEGFNEGRGISFNGLEYVASYGDLIDAYGDAERPFDLGEDGAGHYIQYGRGE 273
Query: 602 GRALGISGMQF-KSVMNLSEKSRDKAD 627
GR G+Q+ S ++ E RD D
Sbjct: 274 GRETTFDGLQYMASYGDVIEAFRDSTD 300
>gi|119383574|ref|YP_914630.1| peptidase domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119373341|gb|ABL68934.1| peptidase domain protein [Paracoccus denitrificans PD1222]
Length = 820
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 160/325 (49%), Gaps = 31/325 (9%)
Query: 8 YTTERIADHLLRDQYW-SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+T IA L D YW + R DV L+ D++ L +++A AL W++V
Sbjct: 150 FTMAEIALQL-TDGYWEATGRSRRAFDVGQGDVLNVDLSGLTQEGRQLAGMALSAWAQVT 208
Query: 67 DLTFEE-----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTI 119
+ F +IH I F S+ G + + + + W YG G +
Sbjct: 209 GIVFNRNPGTNATIH--ITFDDSDWGAWSSSMTSGDRIVSSHVNIGLDWLISYGTGYNSY 266
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFG 178
+HEIGHALGL H G+YNG V GV+N Y NDS+ SVMSYF ++ +DASF
Sbjct: 267 SYQTYIHEIGHALGLGHAGNYNG-SAVLGVNNHYLNDSWQASVMSYFDQAENVWVDASFA 325
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS-----PFIQ----------TIY 223
Y A+PM +DI+A+Q++YG GNN Y S ++ TI+
Sbjct: 326 YIASPMTADILAIQRLYGPTAIRTGNNTYGETTNAGPSYATIAALLRNADTRDDIAFTIF 385
Query: 224 DSGGDDLLDL-TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D GG D+LDL T G + I L + S+ G N++I T+IE+ GND+VIG
Sbjct: 386 DQGGVDMLDLGTDTRGQR--ISLVAGTSSNAYGLVGNISIMPGTLIENAQAGRGNDLVIG 443
Query: 283 NSANNVFFESSGNDVFDGSSGLDTF 307
N A+N+ +GND G++G DT
Sbjct: 444 NWADNILRGGAGNDTLRGAAGNDTL 468
>gi|159045942|ref|YP_001534736.1| neutral zinc metallopeptidase [Dinoroseobacter shibae DFL 12]
gi|157913702|gb|ABV95135.1| neutral zinc metallopeptidase [Dinoroseobacter shibae DFL 12]
Length = 451
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 152/337 (45%), Gaps = 48/337 (14%)
Query: 6 PVYTTERIADHLL------RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWAL 59
P +T +++AD L R+ W +P + DI+ L Q A AL
Sbjct: 36 PTFTVDQVADQLKSGFFKSREASWD-----VEPG---GEAIDVDISRLTEKGQFYAELAL 87
Query: 60 GEWSKVVDLTFEETSIH--------SDIKFISSNNGYVCTPRYDSR---YFMEINFDKAD 108
W+ + F T + S I F +++G P +S Y IN +
Sbjct: 88 DAWTMTTGIEFNITELEIFAFGFTRSGIIFDDTDSGAYAQPIVNSENEIYTARINISQDW 147
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+ G +HEIGHALGL H G+YNG Y D Y NDS+ S+MSYF
Sbjct: 148 IRNDGETIDNYSFQTFIHEIGHALGLEHAGNYNGNAK-YSTDALYTNDSWQMSIMSYFSQ 206
Query: 169 QD-SMMDASFGYCATPMVSDIVAVQKIYGAPKGSL--GNNIYKIEVQQKDS--------- 216
D + +DASF Y TPM++DI AVQ++YG G L GN IY Q S
Sbjct: 207 TDNASIDASFAYVVTPMIADITAVQQLYGV-AGDLRPGNTIYGQPTTQGGSLMSMADGYY 265
Query: 217 --------PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
P TI D GG D ++ + + +N I+LN + S + G + N+ I TVI
Sbjct: 266 EDFGDTSRPITYTIIDDGGFDAINFSDVTADQN-INLNGGAVSDVNGLKGNLVIFSTTVI 324
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E VV SGND + GN ANN FF G D G G D
Sbjct: 325 EYVVSGSGNDTLTGNGANNHFFAGDGRDTIFGGDGDD 361
>gi|149186450|ref|ZP_01864763.1| Serralysin [Erythrobacter sp. SD-21]
gi|148830039|gb|EDL48477.1| Serralysin [Erythrobacter sp. SD-21]
Length = 767
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 157/314 (50%), Gaps = 28/314 (8%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+Y+ ++IA+ L YW + T + ++ L+ + +A A+ W+ V
Sbjct: 147 LYSLDQIANQLTS-GYWGGNERAF------TQPIFYEFVGLSQGEERLALEAMQYWATVA 199
Query: 67 DLTFEETSIHS---DIKFISSNNGYVC--TPRYDSRYFMEINFDKADVW--RYGIGKGTI 119
D+ F S S ++ F +S G + ++ + + + + W +YG G+
Sbjct: 200 DIDFSPASSGSSPANLIFQNSEEGAFAQSSVQFGNGGIVSSTVNVSAAWYAQYGSTLGSY 259
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG- 178
LHEIGHALGL H G+YNG Y D Y NDS+ T+VMSYF ++ + G
Sbjct: 260 TFQTYLHEIGHALGLGHAGNYNG-AASYANDATYLNDSWATTVMSYFDQSENTYFSQQGF 318
Query: 179 ---YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF--------IQTIYDSGG 227
Y TPM++DIVA+Q +YGAP G++IY D+ F TIYDSGG
Sbjct: 319 NSVYVGTPMLADIVAIQNLYGAPSTRTGDDIYGFNSVGIDAVFNATLYPDIAYTIYDSGG 378
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D LD + IDL E +SS+GG N+ IA+ ++E +G SG D +IGN N
Sbjct: 379 HDTLDYSGFA-ADQVIDLRPEMYSSVGGNIGNVAIARGVILEDAIGGSGADQLIGNDVTN 437
Query: 288 VFFESSGNDVFDGS 301
V + + G+DV DG
Sbjct: 438 VLWGNGGDDVIDGG 451
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 222 IYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ +GGDD++D ++ GG N + + ++ G N TI + + G G
Sbjct: 439 LWGNGGDDVIDGGILADILWGGDGNDTLVGSAGNDTLRGEAGNDTIDGGASWDYLFGGPG 498
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLD 305
ND + G + N+ F +G+D DG +G D
Sbjct: 499 NDTLTGGNGNDGLFGDAGDDTLDGGAGAD 527
>gi|229589310|ref|YP_002871429.1| putative metalloprotease [Pseudomonas fluorescens SBW25]
gi|229361176|emb|CAY48040.1| putative metalloprotease [Pseudomonas fluorescens SBW25]
Length = 510
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 147/325 (45%), Gaps = 31/325 (9%)
Query: 5 KPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
KP YTT++ A L R+ + R + H + D + P Q V R AL W
Sbjct: 30 KPAYTTDQAAKQLSRENL--RFHDRNDDSTVDVH-YTVDNSFTQPQQQRV-RQALQSWQD 85
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN----FDKADVWRYG----IGK 116
V ++ F E S SD NN PR D N A + G
Sbjct: 86 VANINFREQSGDSDGTLNVRNN-----PRSDRGVATSPNRTTPHTTATLGTQGGNSSAAL 140
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM-MDA 175
G+ S A+HEIGHA+GL HPG YNGG P Y Y D+ +VMSYF ++ D
Sbjct: 141 GSHFSLTAIHEIGHAIGLHHPGDYNGGNPNYQTGATYAGDTHARTVMSYFSEKNQKGHDF 200
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGS--------LGNNIYKIEVQQK---DSPFIQTIYD 224
+ PM+ DI A Q++YGA + +N + K D P ++D
Sbjct: 201 KNQSPSAPMMDDIAAAQRLYGANHQTRNTDTTYGFNSNTEREAFSLKSATDKPVF-CVWD 259
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG D +D + +N IDLN ES+S +GG + N++IA+ IE+ +G +G D + GN
Sbjct: 260 GGGIDTMDFSGFAQDQN-IDLNAESFSDVGGLKGNVSIAKGCTIENAMGGAGRDTLSGND 318
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFY 309
A N G D G G DTF Y
Sbjct: 319 AANRLKGGGGADTLRGGGGADTFVY 343
>gi|222087758|ref|YP_002546295.1| metallopeptidase protein [Agrobacterium radiobacter K84]
gi|221725206|gb|ACM28362.1| metallopeptidase protein [Agrobacterium radiobacter K84]
Length = 640
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 179/689 (25%), Positives = 282/689 (40%), Gaps = 157/689 (22%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFD-----ITELNPNAQEVARWALG 60
P +T D L+ +YW++ + + S+ LN Q AL
Sbjct: 9 PWPSTSNDVDGLIYGRYWASSALDFSFTTSGAQYGSYSGEQLTFQPLNATMQAAVHSALA 68
Query: 61 EWSKVVDLTF-EETSI--HSDIKFISS----NNGYVCTPRYDSRYFMEINFDKADVW--- 110
++S + +LTF EETS+ ++ ++F S N+ Y YF + DVW
Sbjct: 69 QYSSISNLTFMEETSVPGNATLRFGMSDEAQNSAYT--------YFPSESAQGGDVWFGT 120
Query: 111 RYGIG------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+ G+ KG + LHEIGHALGL HP ++ V +DS +VMS
Sbjct: 121 QSGLSAMTNPVKGNYAWISTLHEIGHALGLKHPHEFSN---TNFVTTSLAHDSMEFTVMS 177
Query: 165 YFMPQDSMM-----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI--------- 209
Y + + + FG+ + M+ DI A+QK+YGA GN Y
Sbjct: 178 YRSYTGASLYTGYTNEDFGFAQSLMMYDIAAIQKLYGADFSAHAGNTTYTFSSTTGEMFI 237
Query: 210 ----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----GYEKNMT 261
+ + D+ T++D GG D D + ++ I+L WS++ Y +
Sbjct: 238 DGVGQGKPGDNRVFLTVWDGGGVDTYDFSNYTSAQS-INLAPGGWSAMSRSQLAYLGDGH 296
Query: 262 IAQ-------------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
A ++IE+ +G SG+D +IGN+ANN GND G +G+DT
Sbjct: 297 FAHGNVYNALQYNGDNRSLIENAIGGSGSDTIIGNAANNSLTGGGGNDWLSGGAGVDTAV 356
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTA 366
+ S + N ++ + +E D L +E+L+F+D+ I D + + YT
Sbjct: 357 FNF-SLKQATVDYGNRAMLLNGSE-GHDSLVWIEKLQFSDRTIVQDDGSALVDDMFYYTH 414
Query: 367 SYEDLIQVIGQDVFESM----KHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
++ DVF++ +H+ G EG D FD+ YL Y D+
Sbjct: 415 NH---------DVFDAGADADQHYSNVGWREGLDPNKFFDTSEYLAKYHDV--------- 456
Query: 421 AAA-----RHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
AAA +HY G KEGR+P + F EY+ + D+ A D +H+ FG
Sbjct: 457 AAAGINPLQHYDQFGWKEGRDPSSLFHTSEYLRLNPDVAAAKIDP-------LEHYLKFG 509
Query: 475 CEEGRFVT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 528
EGR V D Y + D+ +HY G EGR+P+ F
Sbjct: 510 IYEGRNVNAKDLLIDDTFYFKNNPDVETAHADPE----QHYNQFGWHEGRDPNPFFDTSG 565
Query: 529 YIASHEDL----INAFADAPDLVQAGKDHFSNFGYEEGRS----------ITFNPDLYLT 574
Y+A++ D+ +N F H+ +G+ EGR + NPD+
Sbjct: 566 YLAAYHDVAAAGVNPFT-----------HYLQYGWHEGRDPSRNFDAAGYLKLNPDVAAA 614
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ L +HY+ G+ EGR
Sbjct: 615 GINPL------------EHYLEFGVFEGR 631
>gi|194335832|ref|YP_002017626.1| Cadherin [Pelodictyon phaeoclathratiforme BU-1]
gi|194308309|gb|ACF43009.1| Cadherin [Pelodictyon phaeoclathratiforme BU-1]
Length = 1134
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 125/227 (55%), Gaps = 28/227 (12%)
Query: 401 SYLYLGSYDDLRN------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
S+ YL S+ DL V +D A RHYI HG+ EGR F A EY+AS+ DL+N
Sbjct: 8 SWEYLASHTDLMTWLRADGVTDADSATATRHYIEHGISEGRTI-TFNAWEYLASNPDLMN 66
Query: 455 -----AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN------VFGSDR 503
DA D + K HF +G E R +TF+++ YL S DL N V +D
Sbjct: 67 WLRADGVTDA-DAITAAK-HFIGYGYNEERTITFNAWEYLASNPDLMNWLRADGVTDADA 124
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN-----AFADAPDLVQAGKDHFSNFG 558
AA+H+I +G E R F EY+AS+ DL+N DA D + A K HF +G
Sbjct: 125 ITAAKHFIGYGYDEERTI-TFDVWEYLASNPDLMNWLGADGITDA-DAITAAK-HFIAYG 181
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
Y EGR++ F+ YL SY+DL N FG+D AA HY+T+G +EGRA+
Sbjct: 182 YNEGRTMIFDAAAYLASYEDLRNAFGNDTLAATIHYVTYGYREGRAV 228
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 125/235 (53%), Gaps = 31/235 (13%)
Query: 363 EYTASYEDLIQ------VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN--- 413
EY AS+ DL+ V D + +H+ E G+SEGR ITF+++ YL S DL N
Sbjct: 10 EYLASHTDLMTWLRADGVTDADSATATRHYIEHGISEGRTITFNAWEYLASNPDLMNWLR 69
Query: 414 ---VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN-----AFADAPDLVQV 465
V +D AA+H+I +G E R F A EY+AS+ DL+N DA D +
Sbjct: 70 ADGVTDADAITAAKHFIGYGYNEERTI-TFNAWEYLASNPDLMNWLRADGVTDA-DAITA 127
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG------SDRGAAARHYITHGVKEGR 519
K HF +G +E R +TFD + YL S DL N G +D AA+H+I +G EGR
Sbjct: 128 AK-HFIGYGYDEERTITFDVWEYLASNPDLMNWLGADGITDADAITAAKHFIAYGYNEGR 186
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI-TFNPDLYL 573
F A Y+AS+EDL NAF + A H+ +GY EGR++ ++P L +
Sbjct: 187 TM-IFDAAAYLASYEDLRNAFGND---TLAATIHYVTYGYREGRAVNNYHPTLTV 237
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSIL----EYTASYEDLIQVIGQD------VF 380
N + D ++D + + A I ++R+I EY AS DL+ +G D
Sbjct: 112 NWLRADGVTDADAITAAKHFIGYGYDEERTITFDVWEYLASNPDLMNWLGADGITDADAI 171
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+ KHF +G +EGR + FD+ YL SY+DLRN FG+D AA HY+T+G +EGR
Sbjct: 172 TAAKHFIAYGYNEGRTMIFDAAAYLASYEDLRNAFGNDTLAATIHYVTYGYREGR 226
>gi|114571037|ref|YP_757717.1| serralysin [Maricaulis maris MCS10]
gi|114341499|gb|ABI66779.1| Serralysin [Maricaulis maris MCS10]
Length = 1631
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 162/333 (48%), Gaps = 34/333 (10%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+ I D+L + + + R D +T + IT L Q +AR AL W + ++F
Sbjct: 1095 QEIGDYLDSNGFGGLQWDRSAGDTITVN-----ITALTVAGQTLARAALQLWEDITGISF 1149
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFM---EINFDKADVWRYGIGKGTILSHNALHE 127
E + +I F G P S F+ +N A + YG +HE
Sbjct: 1150 TEVATGGEITFDDDEEGAFAGPDATSGGFITAASVNVGTAWLDTYGTNIDGYSFQTYIHE 1209
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVS 186
IGHALGL H G Y+G Y VD Y NDS+ SVMSYF +++ +DA FGY P V+
Sbjct: 1210 IGHALGLGHGGPYDGSAD-YAVDAIYLNDSWQASVMSYFSQNENTFIDADFGYVIGPQVA 1268
Query: 187 DIVAVQKIYGAPKGS------------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
DI+AV +YG + GN I+ P TI+D+GG D +D +
Sbjct: 1269 DIIAVLDMYGGSTSTRGGDTTYGYNSTAGNVIFDATAHSN--PVSFTIFDTGGTDTMDYS 1326
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV------ 288
+ + DL +++S + G E N+ IA+ TVIE+ +G +GND+ IGN ANNV
Sbjct: 1327 GSSANQTF-DLREQAYSDLMGREGNVGIARGTVIENAIGGAGNDIFIGNDANNVLTGGGG 1385
Query: 289 ---FFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
F+ S G+DVFDG SG DT + S Y +
Sbjct: 1386 GDRFYASGGSDVFDGGSGSDTVVFSGASTDYSL 1418
>gi|126729145|ref|ZP_01744959.1| Serralysin [Sagittula stellata E-37]
gi|126710135|gb|EBA09187.1| Serralysin [Sagittula stellata E-37]
Length = 858
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 177/387 (45%), Gaps = 34/387 (8%)
Query: 6 PVYTTERIADHLLRDQYW-SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
P Y+ +++A L D YW S R D L+F++++L+ + A A WS
Sbjct: 39 PSYSLDQVAAQLT-DGYWHSTGRARRSFDAEAGDTLTFNVSQLDSTGRATAIEAFEAWSA 97
Query: 65 VVDLTFE-ETSIHSDIKFISSNNG-----YVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
V L F+ TS +D F ++G Y+ Y +N + W+ G G
Sbjct: 98 VSGLNFQITTSTGADFVFTDDSSGAYSYSYIAGQTITQSY---VNVNTG--WQ---GYGD 149
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASF 177
+HEIGHALGL H G+YNG +G D Y+ DS+ S+MSYF ++ +AS
Sbjct: 150 YYLQTYIHEIGHALGLGHAGNYNGSAD-FGTDAHYQQDSWQYSIMSYFGQWENPHTNASS 208
Query: 178 GYCATPMVSDIVAVQKIYGAPKG-SLGNNIY--KIEVQQK----DSPFIQTIYDSGGDDL 230
Y AT ++DI+A+Q +YG P + GN +Y + QK + + I+DS G D
Sbjct: 209 NYLATTQLADILAIQNLYGTPTNVNTGNTVYGDNTNLAQKGMGLSTQWAVAIFDSAGTDT 268
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++L +DL ++S + G N IA+ VIE+ SG D + NSANN
Sbjct: 269 INLGSRS-ANQRLDLRDGTFSDLNGEVGNFAIARGAVIENATTGSGRDSITTNSANNNIH 327
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKI------YRFE-NAIIVYDANEHKQDFLSDVER 343
SGND GS G DT A S L + Y F N N + F + +E
Sbjct: 328 SGSGNDTIFGSDGNDTINGGAGSDLLAMGGAFTEYTFGCNGAATLTVNGNTTRF-TGIET 386
Query: 344 LRFADQCIDSVNVKQRSILEYTASYED 370
L FAD + + +TA+ D
Sbjct: 387 LTFADGTAVVGSSANGQTITFTATGAD 413
>gi|307131038|ref|YP_003883054.1| secreted protease C [Dickeya dadantii 3937]
gi|306528567|gb|ADM98497.1| Secreted protease C precursor [Dickeya dadantii 3937]
Length = 479
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 166/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 43 NGKTSYSVDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 102
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 103 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 162
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T HEIGHALGL HPG YN G P Y D Y
Sbjct: 163 SSWYNYNQSNIRNPGSEEYGRQTFT-----HEIGHALGLAHPGEYNAGEGDPSYN-DAVY 216
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 217 AEDSYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 276
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG+D D + G N I+LN S+S +GG + N++
Sbjct: 277 TDRDFYTATDSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 333
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 334 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 380
>gi|251789713|ref|YP_003004434.1| Serralysin [Dickeya zeae Ech1591]
gi|247538334|gb|ACT06955.1| Serralysin [Dickeya zeae Ech1591]
Length = 481
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 166/346 (47%), Gaps = 50/346 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLT-------THRLSFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT T + D + NA+++
Sbjct: 45 NGKTSYSADQAAAQITRENVSWNGTNVFGKSANLTFKFLQSATSTPAGDKGFVKFNAEQI 104
Query: 55 A--RWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A + AL W+ V +LTF E + + N Y P Y
Sbjct: 105 AQTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 164
Query: 99 FMEINFDKADVWRYGI---GKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T+ HEIGHALGL HPG YN G P Y D Y
Sbjct: 165 SSWYNYNQSNIRSPGTEEYGRQTLT-----HEIGHALGLAHPGEYNAGEGDPSYN-DAVY 218
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+MSY+ ++ D Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 219 AEDSYQFSIMSYWGENETGADYKGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFHSN 278
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG+D D + G N I+LN S+S +GG + N++
Sbjct: 279 TDRDFYTANDSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 335
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IA IE+ +G SGND+++GN+A+NV +GND+ G++G DT
Sbjct: 336 IAHGVTIENAIGGSGNDLLVGNAADNVLQGGAGNDILYGAAGADTL 381
>gi|23452667|gb|AAN33118.1| extracellular metalloprotease EprC [Erwinia chrysanthemi]
Length = 479
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 166/346 (47%), Gaps = 50/346 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLT-------THRLSFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT T + D + NA+++
Sbjct: 43 NGKTSYSADQAAAQITRENVSWNGTNVFGKSANLTFKFLQSATSTPAGDKGFVKFNAEQI 102
Query: 55 A--RWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A + AL W+ V +LTF E + + N Y P Y
Sbjct: 103 AQTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 162
Query: 99 FMEINFDKADVWRYGI---GKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T+ HEIGHALGL HPG YN G P Y D Y
Sbjct: 163 SSWYNYNQSNIRSPGTEEYGRQTLT-----HEIGHALGLAHPGEYNAGEGDPSYN-DAVY 216
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 217 AEDSYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFHSN 276
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG+D D + G N I+LN S+S +GG + N++
Sbjct: 277 TDRDFYTANDSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 333
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IA IE+ +G SGND+++GN A+NV +GND+ G++G DT
Sbjct: 334 IAHGVTIENAIGGSGNDLLVGNGADNVLQGGAGNDILYGAAGADTL 379
>gi|131066|sp|P16317|PRTC_ERWCH RecName: Full=Secreted protease C; Short=ProC; Flags: Precursor
gi|24987447|pdb|1K7G|A Chain A, Prtc From Erwinia Chrysanthemi
gi|148488|gb|AAA63638.1| neutral protease large subunit [Erwinia chrysanthemi]
gi|148492|gb|AAA24860.1| metalloprotease C [Erwinia chrysanthemi]
Length = 479
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 165/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 43 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 102
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 103 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 162
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T HEIGHALGL HPG YN G P Y D Y
Sbjct: 163 SSWYNYNQSNIRNPGSEEYGRQTFT-----HEIGHALGLAHPGEYNAGEGDPSYN-DAVY 216
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 217 AEDSYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 276
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG D D + G N I+LN S+S +GG + N++
Sbjct: 277 TDRDFYTATDSSKALIFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 333
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 334 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 380
>gi|50121709|ref|YP_050876.1| metalloprotease [Pectobacterium atrosepticum SCRI1043]
gi|49612235|emb|CAG75685.1| metalloprotease [Pectobacterium atrosepticum SCRI1043]
Length = 469
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 162/344 (47%), Gaps = 39/344 (11%)
Query: 5 KPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFD--ITELNPNAQEV 54
KP +T+E+ ++RD W+ + K LT L S D + + ++
Sbjct: 44 KPSFTSEQAGWQIVRDGLTWNGTNVFGKSADLTYSFLQNVKSIPSGDQGFVKFSAAQEQQ 103
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR--YDSRYF--MEINFDKADVW 110
A+ +L WS V +LTF + S N + R YD++ + M N A
Sbjct: 104 AKLSLQSWSDVANLTFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSAAGSA 163
Query: 111 RYGIGKGTILS-------HNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTS 161
+ T+ + HEIGHALGL HPG YN G P Y D Y D+ S
Sbjct: 164 WFNYNADTVRNPATEYGKQTLTHEIGHALGLNHPGDYNAGEGNPTY-RDVTYAEDTRQYS 222
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE---------V 211
+MSY+ Q++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 223 LMSYWSEQNTGGDFKGHYAAGPLIDDIAAIQLLYGANMDTRTGDTVYGFNSNTGRDFYTT 282
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I +++D+GG+D D + G K+ IDLN +S +GG + N++IA IE
Sbjct: 283 NSNSQKLIFSVWDAGGNDTFDFS---GYKDNQIIDLNEGRFSDVGGLKGNVSIAHGVTIE 339
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ +G SGND++IGNSA+N+ +G D G +G D F Y + S
Sbjct: 340 NAIGGSGNDIIIGNSADNILQGGAGADTLTGGAGKDIFVYASAS 383
>gi|227326952|ref|ZP_03830976.1| metalloprotease [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 476
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 161/340 (47%), Gaps = 39/340 (11%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFD--ITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L S D + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR--YDSRYF--MEINFDKAD 108
+ A+ +L WS V ++TF + S N + R YD++ + M N A
Sbjct: 100 QQAKLSLQSWSDVANITFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSAAG 159
Query: 109 VWRYGIGKGTILS-------HNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFL 159
+ T+ + HEIGHALGL HPGSYN G P Y D Y D+
Sbjct: 160 SAWFNYNSDTVRNPATEYGKQTLTHEIGHALGLNHPGSYNAGEGNPTY-RDVTYAEDTRQ 218
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-------- 210
S+MSY+ Q++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 219 FSLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDFY 278
Query: 211 -VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTV 267
I +++D+GG+D D + G +N I+LN +S +GG + N++IA
Sbjct: 279 TTTSNSQKLIFSVWDAGGNDTFDFS---GYRNDQRINLNEGGFSDVGGLKGNVSIAHGVT 335
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +G SGND++IGN ANN+ +G+DV G G DT
Sbjct: 336 IENAIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTL 375
>gi|24987448|pdb|1K7I|A Chain A, Prtc From Erwinia Chrysanthemi: Y228f Mutant
Length = 479
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 165/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 43 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 102
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 103 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 162
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T HEIGHALGL HPG YN G P Y D Y
Sbjct: 163 SSWYNYNQSNIRNPGSEEYGRQTFT-----HEIGHALGLAHPGEYNAGEGDPSYN-DAVY 216
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+MS++ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 217 AEDSYQFSIMSFWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 276
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG D D + G N I+LN S+S +GG + N++
Sbjct: 277 TDRDFYTATDSSKALIFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 333
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 334 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 380
>gi|541038|pir||JN0892 metalloproteinase (EC 3.4.24.-) B - Erwinia chrysanthemi
Length = 478
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 146/291 (50%), Gaps = 42/291 (14%)
Query: 50 NAQEVA--RWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-R 93
NA+++A + AL W+ V +LTF E + + N Y P
Sbjct: 97 NAEQIAQTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYPGN 156
Query: 94 YDSRYFMEINFDKADVWRYGI---GKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYG 148
Y N++++++ G G+ T+ HEIGHALGL HPG YN G P Y
Sbjct: 157 YQGAGSSWYNYNQSNIRSPGTEEYGRQTLT-----HEIGHALGLAHPGEYNAGEGDPSYN 211
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIY 207
D Y DS+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 212 -DAVYAEDSYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVY 270
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGY 256
I +++D+GG+D D + G N I+LN S+S +GG
Sbjct: 271 GFHSNTDRDFYTANDSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGSFSDVGGL 327
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ N++IA IE+ +G SGND+++GN A+NV +GND+ G++G DT
Sbjct: 328 KGNVSIAHGVTIENAIGGSGNDLLVGNGADNVLQGGAGNDILYGAAGADTL 378
>gi|24987255|pdb|1GO8|P Chain P, The Metzincin's Methionine: Prtc M226l Mutant
Length = 462
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 165/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 145
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T HEIGHALGL HPG YN G P Y D Y
Sbjct: 146 SSWYNYNQSNIRNPGSEEYGRQTFT-----HEIGHALGLAHPGEYNAGEGDPSYN-DAVY 199
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S++SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 200 AEDSYQFSILSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 259
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG D D + G N I+LN S+S +GG + N++
Sbjct: 260 TDRDFYTATDSSKALIFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 316
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 317 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 363
>gi|253687942|ref|YP_003017132.1| Serralysin [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754520|gb|ACT12596.1| Serralysin [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 476
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 160/340 (47%), Gaps = 39/340 (11%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFD--ITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L S D + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR--YDSRYF--MEINFDKAD 108
+ A+ +L WS V ++TF + S N + R YD++ + M N A
Sbjct: 100 QQAKLSLQSWSDVANVTFTQVSPTQKATITFGNYTRDSSGRLDYDTQAYAYMPGNHSAAG 159
Query: 109 VWRYGIGKGTILS-------HNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFL 159
+ T+ + HEIGHALGL HPGSYN G P Y D Y D+
Sbjct: 160 SAWFNYNSDTVRNPATEYGKQTLTHEIGHALGLNHPGSYNAGEGNPTY-RDVTYAEDTRQ 218
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI--------- 209
S+MSY+ Q++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 219 FSLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDFY 278
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTV 267
I +++D+GG D D + G +N I+LN +S +GG + N++IA
Sbjct: 279 SANSSSDKLIFSVWDAGGTDTFDFS---GYRNDQRINLNEGGFSDVGGLKGNVSIAHGVT 335
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +G SGND++IGN ANN+ +G+DV G G DT
Sbjct: 336 IENAIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTL 375
>gi|24987449|pdb|1K7Q|A Chain A, Prtc From Erwinia Chrysanthemi: E189a Mutant
Length = 479
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 164/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 43 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 102
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 103 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 162
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T H IGHALGL HPG YN G P Y D Y
Sbjct: 163 SSWYNYNQSNIRNPGSEEYGRQTFT-----HAIGHALGLAHPGEYNAGEGDPSYN-DAVY 216
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 217 AEDSYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 276
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG D D + G N I+LN S+S +GG + N++
Sbjct: 277 TDRDFYTATDSSKALIFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 333
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 334 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 380
>gi|131125|sp|P23694|PRZN_SERMA RecName: Full=Serralysin; AltName: Full=Extracellular
metalloproteinase; AltName: Full=Zinc proteinase; Flags:
Precursor
gi|47239|emb|CAA39137.1| metalloprotease [Serratia marcescens]
Length = 487
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 158
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 159 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYN- 216
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA P G+ +Y
Sbjct: 217 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYG 276
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 277 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 334
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 335 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 384
>gi|302184989|ref|ZP_07261662.1| serralysin [Pseudomonas syringae pv. syringae 642]
Length = 476
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 178/382 (46%), Gaps = 60/382 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ AD+LLRD W+ N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAADYLLRDDASWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTPRYDSR------Y 98
A ++ W+ V ++F + + D + F + +NG + P +SR Y
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSWY 158
Query: 99 FMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
++ ++ D YG HEIGH LGL HPG YN G P Y D Y
Sbjct: 159 LVDNSYKVNTTPDNGNYG-------RQTLTHEIGHTLGLSHPGDYNAGEGNPSY-KDATY 210
Query: 154 ENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 211 AEDTRGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANMSTRAGDTVYG 270
Query: 209 I---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 271 FNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGMVG 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IA+ V+E+ VG SGND++IGN+A N +GND+ G G+D+ A + I
Sbjct: 329 NVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGVDSLTGGAGA---DI 385
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ F + D+N QD + D
Sbjct: 386 FVFGAS---SDSNRAGQDTIRD 404
>gi|242556628|pdb|3HBV|P Chain P, Prtc Methionine Mutants: M226a In-House
gi|242556638|pdb|3HDA|P Chain P, Prtc Methionine Mutants: M226a_desy
Length = 462
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 164/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 145
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T HEIGHALGL HPG YN G P Y D Y
Sbjct: 146 SSWYNYNQSNIRNPGSEEYGRQTFT-----HEIGHALGLAHPGEYNAGEGDPSYN-DAVY 199
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+ SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 200 AEDSYQFSIASYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 259
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG D D + G N I+LN S+S +GG + N++
Sbjct: 260 TDRDFYTATDSSKALIFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 316
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 317 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 363
>gi|251789714|ref|YP_003004435.1| Serralysin [Dickeya zeae Ech1591]
gi|247538335|gb|ACT06956.1| Serralysin [Dickeya zeae Ech1591]
Length = 478
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 157/363 (43%), Gaps = 63/363 (17%)
Query: 3 NIKPVYTTERIADHLLRDQY-W---------SNYFIRYKPDVLTTHRLSFDITELNPNAQ 52
N KP Y+ E D + RD W +N ++ +T + N
Sbjct: 42 NGKPSYSIEEAGDQITRDNVSWNGANVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQI 101
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR--YDSRYFMEI-------- 102
A+ AL W+ V ++TF E + + N + R Y S+ + +
Sbjct: 102 SQAKLALQSWADVANVTFTEVTGNQSANVTFGNYTRDSSGRLDYGSQAYAYLPGSGSASG 161
Query: 103 ---------NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
N D YG HEIGHALGL HPG YN G P Y D
Sbjct: 162 TTWYNYNVDNIRSPDTMEYG-------RQTLTHEIGHALGLNHPGDYNAGEGNPSY-SDV 213
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y D+ S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+ +Y
Sbjct: 214 TYAEDTRQFSIMSYWSEKNTGGDFKGHYAAGPMLDDIAAIQRLYGANMTTRTGDTVYGFN 273
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKN 259
I + +D+GG+D D + G N I+LN S S +GG + N
Sbjct: 274 SNTDRDFYTATSSSKALIFSAWDAGGNDTFDFS---GYSNNQRINLNEGSLSDVGGLKGN 330
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANN---------VFFESSGNDVFDGSSGLDTFFYY 310
++IA+ IE+ +G SGND++IGN+A+N V F SG D G SG DTF Y
Sbjct: 331 VSIAEGVTIENAIGGSGNDLLIGNNADNTLRGGAGDDVLFGGSGADRLYGGSGRDTFVYS 390
Query: 311 APS 313
A S
Sbjct: 391 ATS 393
>gi|227113041|ref|ZP_03826697.1| metalloprotease [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 476
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 158/340 (46%), Gaps = 39/340 (11%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS---------FDITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR--YDSRYF--MEINFDKAD 108
+ A+ +L WS V ++TF + S N + R YD++ + M N A
Sbjct: 100 QQAKLSLQSWSDVANITFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSAAG 159
Query: 109 VWRYGIGKGTILS-------HNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFL 159
+ T+ + HEIGHALGL HPG YN G P Y D Y D+
Sbjct: 160 SAWFNYNSDTVRNPATEYGKQTLTHEIGHALGLNHPGDYNAGEGNPTY-RDVTYAEDTRQ 218
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-------- 210
S+MSY+ Q++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 219 FSLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDFY 278
Query: 211 -VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTV 267
I +++D+GG+D D + G +N I+LN +S +GG + N++IA
Sbjct: 279 TTTSNSQKLIFSVWDAGGNDTFDFS---GYRNDQRINLNEGGFSDVGGLKGNVSIAHGVT 335
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +G SGND++IGN ANN+ +G+DV G G DT
Sbjct: 336 IENAIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTL 375
>gi|47240|emb|CAA39138.1| metalloprotease [Serratia marcescens]
Length = 493
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 47 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 106
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 107 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 164
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 165 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYN- 222
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA P G+ +Y
Sbjct: 223 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYG 282
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 283 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 340
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 341 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 390
>gi|237801166|ref|ZP_04589627.1| serralysin [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024023|gb|EGI04080.1| serralysin [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 476
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 178/384 (46%), Gaps = 64/384 (16%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN-----------YFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD+LLRD W++ F+ KP +F
Sbjct: 39 NGKPSYSVDQAADYLLRDDAAWADRDGNGTINLTYTFLTAKPAGFNNSLGTFSAFNAQQK 98
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTPRYDSR----- 97
AQ V ++ W+ V ++F + + D + F + ++G + P +SR
Sbjct: 99 AQAV--LSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGNAGGAAFAYLPSGNSRTDGQS 156
Query: 98 -YFMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
Y ++ ++ D YG H HEIGH LGL HPG YN G P Y D
Sbjct: 157 WYLVDNSYKLNTTPDNGNYG-------RHTLTHEIGHTLGLSHPGDYNAGEGNPAY-KDA 208
Query: 152 DYENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNI 206
Y D+ SVMSY+ Q+ + + Y + P + DI AVQ++YGA + G+ +
Sbjct: 209 SYAEDTLGYSVMSYWSESNTDQNFVKGGAPAYSSGPQLDDIAAVQQLYGANMSTRAGDTV 268
Query: 207 YKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGY 256
Y S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 269 YGFNSTAGRDFYSATSAASKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGM 326
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N++IA+ V+E+ VG SGND++IGN+A N +GND+ G +G D+ A +
Sbjct: 327 VGNVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGAGADSLTGGAGA--- 383
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
++ F + D+N QD + D
Sbjct: 384 DVFVFGAS---SDSNRAAQDTIRD 404
>gi|47241|emb|CAA39139.1| metalloprotease [Serratia marcescens]
gi|227601|prf||1707277A metalloprotease
Length = 504
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 58 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 117
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 118 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 175
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 176 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYN- 233
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA P G+ +Y
Sbjct: 234 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYG 293
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 294 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 351
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 352 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 401
>gi|331010762|gb|EGH90818.1| serralysin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 476
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 178/384 (46%), Gaps = 64/384 (16%)
Query: 3 NIKPVYTTERIADHLLRDQY-WS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ AD++LRD W+ N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAADYILRDNAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTPRYDSR------Y 98
A ++ W+ V ++F + + D + F + +NG + P +SR Y
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSWY 158
Query: 99 FMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
++ ++ D YG HEIGH LGL HPG YN G P Y D Y
Sbjct: 159 LVDNSYKVNTTPDNGNYG-------RQTLTHEIGHTLGLSHPGDYNAGEGNPTY-KDASY 210
Query: 154 ENDSFLTSVMSYFMPQDSMMDASF------GYCATPMVSDIVAVQKIYGAPKGS-LGNNI 206
D+ SVMSY+ +S D +F Y + P++ DI AVQ++YGA + G+ +
Sbjct: 211 AEDTRGYSVMSYW--SESNTDQNFVKGGVAAYSSAPLLDDIAAVQQLYGANMSTRAGDTV 268
Query: 207 YKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGY 256
Y S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 269 YGFNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGM 326
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N++IA+ V+E+ VG SGND++IGN+A N +GND+ G G D+ A +
Sbjct: 327 VGNVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA--- 383
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
I+ F + D+N QD + D
Sbjct: 384 DIFVFGAS---SDSNRAAQDTIRD 404
>gi|254574998|pdb|3HBU|P Chain P, Prtc Methionine Mutants: M226h Desy
Length = 462
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 164/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 145
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T HEIGHALGL HPG YN G P Y D Y
Sbjct: 146 SSWYNYNQSNIRNPGSEEYGRQTFT-----HEIGHALGLAHPGEYNAGEGDPSYN-DAVY 199
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+ SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 200 AEDSYQFSIHSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 259
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG D D + G N I+LN S+S +GG + N++
Sbjct: 260 TDRDFYTATDSSKALIFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 316
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 317 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 363
>gi|330900592|gb|EGH32011.1| serralysin [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 476
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 177/382 (46%), Gaps = 60/382 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ AD++LRD W+ N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAADYILRDDAAWTDRDGNGIINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTPRYDSR------Y 98
A ++ W+ V ++F + + D + F + +NG + P +SR Y
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSWY 158
Query: 99 FMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
++ ++ D YG HEIGH LGL HPG YN G P Y D Y
Sbjct: 159 LVDNSYKVNTTPDNGNYG-------RQTLTHEIGHTLGLSHPGDYNAGEGNPSY-KDATY 210
Query: 154 ENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 211 AEDTRGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYG 270
Query: 209 I---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 271 FNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGMVG 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IA+ V+E+ VG SGND++IGN+A N +GND+ G G D+ A + I
Sbjct: 329 NVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA---DI 385
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ F + D+N QD + D
Sbjct: 386 FVFGAS---SDSNRAGQDTIRD 404
>gi|124518424|gb|ABN13866.1| metalloprotease precursor [Serratia sp. KCK]
Length = 493
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 166/348 (47%), Gaps = 46/348 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++TE+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 47 NGKDSFSTEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 106
Query: 51 AQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSNNGYVCTPRYDSRYFM-------E 101
Q+ A+ +L WS V ++TF E ++I F + + YD++ + +
Sbjct: 107 QQQQAKLSLQSWSDVANITFTEVGAGQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIYQ 166
Query: 102 INFDKADVWRYGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGVD 150
W Y + + + H A HEIGHALGL HPG YN G P Y D
Sbjct: 167 GQNLGGQTW-YNVNQSNV-KHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTY-RD 223
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK- 208
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + + G+ +Y
Sbjct: 224 ASYAEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANQTTRTGDTVYGF 283
Query: 209 --------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ I +D+GG+D D + I+LN +S+S +GG + N+
Sbjct: 284 NSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGY-TANQRINLNEKSFSDVGGLKGNV 342
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 343 SIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 390
>gi|131089|sp|P19144|PRTX_ERWCH RecName: Full=Secreted protease C; Short=ProC; Flags: Precursor
gi|148490|gb|AAA24859.1| metalloprotease C [Erwinia chrysanthemi]
Length = 478
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 157/363 (43%), Gaps = 63/363 (17%)
Query: 3 NIKPVYTTERIADHLLRDQY-W---------SNYFIRYKPDVLTTHRLSFDITELNPNAQ 52
N KP Y+ E D + RD W +N ++ +T + N
Sbjct: 42 NGKPSYSIEDAGDQITRDNVSWNGANVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQI 101
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYD----------------- 95
A+ AL W+ V ++TF E + + N + R D
Sbjct: 102 SQAKLALQSWADVANVTFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSASG 161
Query: 96 -SRYFMEI-NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
+ Y + N D YG HEIGHALGL HPG YN G P Y D
Sbjct: 162 TTWYNYNVDNIRSPDTMEYG-------RQTLTHEIGHALGLNHPGDYNAGEGNPSY-SDV 213
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y D+ S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+++Y
Sbjct: 214 TYAEDTRQFSIMSYWSEKNTGGDFKGHYAAGPMLDDIAAIQRLYGANMTTRTGDSVYGFN 273
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKN 259
I + +D+GG+D D + G N I+LN S S +GG + N
Sbjct: 274 SNTDRDFYTATSSSKALIFSAWDAGGNDTFDFS---GYSNNQRINLNDGSLSDVGGLKGN 330
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANN---------VFFESSGNDVFDGSSGLDTFFYY 310
++IA+ IE+ +G SGND++IGN+A+N V F SG D G SG DTF Y
Sbjct: 331 VSIAEGVTIENAIGGSGNDLLIGNNADNTLRGGAGDDVLFGGSGADRLYGGSGRDTFVYT 390
Query: 311 APS 313
A S
Sbjct: 391 AAS 393
>gi|330954598|gb|EGH54858.1| serralysin [Pseudomonas syringae Cit 7]
Length = 476
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 177/382 (46%), Gaps = 60/382 (15%)
Query: 3 NIKPVYTTERIADHLLRDQY-WS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ AD++LRD W+ N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAADYILRDNAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTPRYDSR------Y 98
A ++ W+ V ++F + + D + F + +NG + P +SR Y
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSWY 158
Query: 99 FMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
++ ++ D YG HEIGH LGL HPG YN G P Y D Y
Sbjct: 159 LVDNSYKVNTTPDNGNYG-------RQTLTHEIGHTLGLSHPGDYNAGEGNPSY-KDATY 210
Query: 154 ENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 211 AEDTRGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYG 270
Query: 209 I---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
S + +++D GG D LD + G +N I+LN S+S IGG
Sbjct: 271 FNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDIGGMVG 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IA+ V+E+ VG SGND++IGN+A N +GND+ G G D+ A + I
Sbjct: 329 NVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA---DI 385
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ F + D+N QD + D
Sbjct: 386 FVFGAS---SDSNRAGQDTIRD 404
>gi|270264281|ref|ZP_06192548.1| serralysin, precursor [Serratia odorifera 4Rx13]
gi|270041930|gb|EFA15027.1| serralysin, precursor [Serratia odorifera 4Rx13]
Length = 504
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 169/349 (48%), Gaps = 48/349 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++TE+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 58 NGKDSFSTEQAGLFITRENQTWNGYKVFGQPAKLTFSFPDYKFSSTNVAGDTGLSKFSAE 117
Query: 51 AQEVARWALGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCTPRYDSRYFMEINFD--- 105
Q+ A+ +L WS V ++TF E S ++I F + + YD++ + +
Sbjct: 118 QQQQAKLSLQSWSDVANITFTEVAPSQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIYQ 177
Query: 106 ----KADVWRYGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGVD 150
W Y + + + H A HEIGHALGL HPG YN G P Y D
Sbjct: 178 GQNLGGQTW-YNVNQSNV-QHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYN-D 234
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK- 208
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 235 ASYAEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANLSTRTGDTVYGF 294
Query: 209 --------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKN 259
+ I +D+GG+D D + G N I+LN +S+S +GG + N
Sbjct: 295 NSNTGRDFLSTSGNAQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKGN 352
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IA IE+ +G SGNDV++GN+ANNV +GND+ G +G D +
Sbjct: 353 VSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDILFGGAGADELW 401
>gi|60461914|gb|AAX21094.1| ProA [Serratia proteamaculans]
Length = 504
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 168/349 (48%), Gaps = 48/349 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++TE+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 58 NGKDSFSTEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 117
Query: 51 AQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSNNGYVCTPRYDSRYFMEINFD--- 105
Q+ A+ +L WS V ++TF E ++I F + + YD++ + +
Sbjct: 118 QQQQAKLSLQSWSDVANITFTEVGAGQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIYQ 177
Query: 106 ----KADVWRYGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGVD 150
W Y + + + H A HEIGHALGL HPG YN G P Y D
Sbjct: 178 GQNLGGQTW-YNVNQSNV-KHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTY-RD 234
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK- 208
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + + G+ +Y
Sbjct: 235 ASYAEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANQTTRTGDTVYGF 294
Query: 209 --------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKN 259
+ I +D+GG+D D + G N I+LN +S+S +GG + N
Sbjct: 295 NSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKGN 352
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 353 VSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 401
>gi|238791577|ref|ZP_04635215.1| Serralysin [Yersinia intermedia ATCC 29909]
gi|238729193|gb|EEQ20709.1| Serralysin [Yersinia intermedia ATCC 29909]
Length = 479
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 164/383 (42%), Gaps = 59/383 (15%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSF---------DITELNPNAQ 52
N KP Y+ E + R DQ W+ ++ +P LT L + NP
Sbjct: 40 NGKPSYSNEDAGLQITRTDQTWNGKYVFDQPVKLTYSFLDSVTRIPGGDKGFVKFNPAQI 99
Query: 53 EVARWALGEWSKVVDLTFEE--TSIHSDIKF----------ISSNNGYVCTPRYDSRYFM 100
A+ +L WS ++TF E S +++ F ++ + Y P S
Sbjct: 100 ATAKLSLQSWSDAANITFTEITPSQKANVTFGNFTLSHDGSLADSQAYALLPGSGSSSGS 159
Query: 101 EI------NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG--YPVYGVDND 152
N D YG HEIGHALGL HPG+YN G P Y D
Sbjct: 160 TWYNYNVDNIRHPDTMEYG-------RQTLTHEIGHALGLSHPGNYNAGEGTPTY-KDVT 211
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ +++ D Y A PM+ DI A+Q +YGA + G+ IY
Sbjct: 212 YAEDTRQFSIMSYWNEKNTGGDNKGHYAAAPMLDDIAAIQHLYGANMTTRTGDTIYGFHS 271
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNM 260
I +++D+ G+D D + G N I+L+ S++ +GG + N+
Sbjct: 272 NTHRDYYTAADSSKALIFSVWDADGNDTFDFS---GYSNDQRINLHEGSFTDVGGLKGNV 328
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+IA IE+ +G SGND+++GN A N GND+ G G D + ++ +
Sbjct: 329 SIAAGVTIENAIGGSGNDIIVGNDARNTLMGGDGNDILFGDGGADVLWGGGGKDIFVFGK 388
Query: 321 FENAIIVYDANEHKQDFLSDVER 343
V D+ D++ D ER
Sbjct: 389 ------VSDSTPQVADWIMDFER 405
>gi|261822160|ref|YP_003260266.1| Serralysin [Pectobacterium wasabiae WPP163]
gi|261606173|gb|ACX88659.1| Serralysin [Pectobacterium wasabiae WPP163]
Length = 474
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 157/338 (46%), Gaps = 39/338 (11%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS---------FDITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L + + +
Sbjct: 38 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVKSIPSGDQGFVKFSAAQE 97
Query: 53 EVARWALGEWSKVVDLTFEETSI--HSDIKFISSNNGYVCTPRYDSRYF--MEINFDKAD 108
A+ +L WS V +LTF E S + I F + YD++ + M N A
Sbjct: 98 HQAKLSLQSWSDVANLTFTEVSPTQKATITFGNYTRDSSGKMDYDTQAYAYMPGNHSAAG 157
Query: 109 VWRYGIGKGTIL-------SHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFL 159
+ T+ HEIGHALGL HPGSYN G P Y D Y D+
Sbjct: 158 SAWFNYNAETVRDPTTEYGKQTLTHEIGHALGLNHPGSYNAGEGDPTY-RDVTYAEDTRQ 216
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI--------- 209
S+MSY+ Q++ D + Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 217 FSLMSYWSEQNTGGDFQWHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNADRDFY 276
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTV 267
I +++D+GG+D D + G ++ I+L +S +GG + N++IA
Sbjct: 277 SAHSNSDKLIFSVWDAGGNDTFDFS---GYRDDQRINLTEGGFSDVGGLKGNVSIAHGVT 333
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
IE+ +G SGND++IGN ANN+ +GNDV G G D
Sbjct: 334 IENAIGGSGNDIIIGNDANNILQGGAGNDVIYGGGGAD 371
>gi|5733435|gb|AAD49575.1|AF141295_1 metalloprotease [Pectobacterium carotovorum subsp. carotovorum]
Length = 473
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 39/338 (11%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFD--ITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L S D + + +
Sbjct: 38 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVKSIPSGDQGFVKFSAAQE 97
Query: 53 EVARWALGEWSKVVDLTFEETSI--HSDIKFISSNNGYVCTPRYDSRYF--MEINFDKAD 108
A+ +L WS V +LTF E S + I F + YD++ + M N A
Sbjct: 98 HQAKLSLQSWSDVANLTFTEVSPTQKATITFGNYTRDSSGKMDYDTQAYAYMPGNHSAAG 157
Query: 109 VWRYGIGKGTIL-------SHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFL 159
+ T+ HEIGHALGL HPGSYN G P Y D Y D+
Sbjct: 158 SAWFNYNAETVRDPTTEYGKQTLTHEIGHALGLNHPGSYNAGEGDPTY-RDVTYAEDTRQ 216
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI--------- 209
S+MSY+ Q++ D + Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 217 FSLMSYWSEQNTGGDFQWHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNADRDFY 276
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTV 267
I +++D+GG+D D + G ++ I+L +S +GG + N++IA
Sbjct: 277 SAHSNSDKLIFSVWDAGGNDTFDFS---GYRDDQRINLTEGGFSDVGGLKGNVSIAHGVT 333
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
IE+ +G SGND++IGN ANN+ +GNDV G G D
Sbjct: 334 IENAIGGSGNDIIIGNDANNILQGGAGNDVIYGGGGAD 371
>gi|293393921|ref|ZP_06638228.1| alkaline metalloproteinase [Serratia odorifera DSM 4582]
gi|291423748|gb|EFE96970.1| alkaline metalloproteinase [Serratia odorifera DSM 4582]
Length = 489
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 173/380 (45%), Gaps = 50/380 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDITELNPNA---------- 51
N K +TTE+ ++ R +Q W+ + P LT + N
Sbjct: 47 NGKDSFTTEQAGLYITRSNQTWNGKGVFDTPVKLTYAFPDYAFNSANAGGDRGLSKFSVE 106
Query: 52 -QEVARWALGEWSKVVDLTFEETS--IHSDIKFISSNNGYVCTPRYDSRYFMEINFD--- 105
Q+ A+ +L W+ V ++TF E S ++I F + + YD++ + +
Sbjct: 107 QQQQAKLSLQSWADVANITFTEVSGSQKANITFGNYSQDQYGNTDYDTQAYAWLPGSGNV 166
Query: 106 KADVWRYGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGVDNDYE 154
W Y I + I H A HEIGHALGL HPG YN G P Y D Y
Sbjct: 167 SGQSW-YNINQSNI-QHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPSY-KDVSYA 223
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK----- 208
D+ + S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 224 EDTRMFSLMSYWSETNTGGDNGGHYSAAPLLDDISAIQHLYGANMSTRTGDTVYGFNSNT 283
Query: 209 ----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIA 263
+ I +D GG D D + G N I+LN +S+S +GG + N++IA
Sbjct: 284 GRDFLSTSSNAQKVIFAAWDGGGKDTFDFS--GYTANQRINLNEKSFSDVGGLKGNVSIA 341
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN ANN+ +GNDV G G D + A S I+ F
Sbjct: 342 AGVTIENAIGGSGNDVLVGNQANNLLKGGAGNDVLFGGGGADELWGGAGS---DIFVFAA 398
Query: 324 AIIVYDANEHKQDFLSDVER 343
A D+ D++ D ++
Sbjct: 399 A---SDSKSGAADWIRDFQK 415
>gi|255311883|pdb|3HB2|P Chain P, Prtc Methionine Mutants: M226i
Length = 462
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 145
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T H IGHALGL HPG YN G P Y D Y
Sbjct: 146 SSWYNYNQSNIRNPGSEEYGRQTFT-----HAIGHALGLAHPGEYNAGEGDPSYN-DAVY 199
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S++SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 200 AEDSYQFSIISYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 259
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG D D + G N I+LN S+S +GG + N++
Sbjct: 260 TDRDFYTATDSSKALIFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 316
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 317 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 363
>gi|24987254|pdb|1GO7|P Chain P, The Metzincin's Methionine: Prtc M226c-E189k Double Mutant
Length = 462
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ A + R+ W+ + K LT L S D + NA+++
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 55 --ARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSRY 98
A+ +L WS V +LTF E + + N Y P Y
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGAG 145
Query: 99 FMEINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
N++++++ G G+ T H+IGHALGL HPG YN G P Y D Y
Sbjct: 146 SSWYNYNQSNIRNPGSEEYGRQTFT-----HKIGHALGLAHPGEYNAGEGDPSYN-DAVY 199
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS+ S+ SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 200 AEDSYQFSICSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSN 259
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG D D + G N I+LN S+S +GG + N++
Sbjct: 260 TDRDFYTATDSSKALIFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKGNVS 316
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 317 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY 363
>gi|218198433|gb|EEC80860.1| hypothetical protein OsI_23479 [Oryza sativa Indica Group]
Length = 487
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 164/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 158
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 159 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTY-R 216
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 217 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 276
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I ++D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 277 FNSNTGRDFLSTTSNAQKLIFAVWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 334
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 335 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 384
>gi|289679140|ref|ZP_06500030.1| serralysin [Pseudomonas syringae pv. syringae FF5]
Length = 476
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 177/382 (46%), Gaps = 60/382 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ AD++LRD W+ N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAADYILRDDAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTPRYDSR------Y 98
A ++ W+ V ++F + + D + F + +NG + P +SR Y
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSWY 158
Query: 99 FMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
++ ++ D YG HEIGH LGL HPG YN G P Y D Y
Sbjct: 159 LVDNSYKVNTTPDNGNYG-------RQTLTHEIGHTLGLSHPGDYNAGEGNPSY-KDATY 210
Query: 154 ENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 211 AEDTRGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYG 270
Query: 209 I---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 271 FNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGMVG 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IA+ V+E+ VG SGND++IGN+A N +GND+ G G D+ A + I
Sbjct: 329 NVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA---DI 385
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ F + D+N QD + D
Sbjct: 386 FVFGAS---SDSNRAGQDTIRD 404
>gi|296283662|ref|ZP_06861660.1| serralysin [Citromicrobium bathyomarinum JL354]
Length = 972
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 172/369 (46%), Gaps = 33/369 (8%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P++T ++I+D L YW R+ +V ++ ++T L Q +AR AL W+ V
Sbjct: 123 PIFTNDQISDQLTS-GYWGGSTRRW--NVAPGGTITVNLTGLTTEGQFLAREALNLWTDV 179
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFM---EINFDKADVWRYGIGKGTILSH 122
+ F E + + I F + +G + +F +N + YG T
Sbjct: 180 TGINFSEITTSAQITFDDNESGAFAGGSTSNGFFTGNSRVNVSTDWLTNYGTTLNTYSFQ 239
Query: 123 NALHEIGHALGLMHPGSYNGG--YPVYGVDNDYENDSFLTSVMSYFMPQD----SMMDAS 176
+HEIGHALGL H G+YNG YP D Y+NDS+ T++MSYF P + S +
Sbjct: 240 TYIHEIGHALGLGHGGNYNGSADYPA---DALYQNDSWNTTIMSYFSPGENTYFSQQGFT 296
Query: 177 FGYCATPMVSDIVAVQK-IYGAPKGSL------------GNNIYKIEVQQKDSPFIQTIY 223
+ Y TPMV+DI++ +Y + G+ G +Y V + I
Sbjct: 297 YQYTITPMVADIISTNGGLYASYSGTRTGDTTYGFNNTSGRAVYDASVNANAT---VAII 353
Query: 224 DSGGDDLLDLTLIGGV-KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D GG D LD + I+LN E + + G N+ IA+ TVIE+ +G +G+D +IG
Sbjct: 354 DHGGIDTLDYSFTNASYTQLINLNPEVFGNTRGRVGNLVIARGTVIENAIGGAGSDTLIG 413
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N A+N+ ++GND DG G DT + Y I + + D LS +E
Sbjct: 414 NIADNILRGNAGNDTIDGGVGTDTAVFSGNRADYTITNLSGGRVQV-SGPDGTDTLSSIE 472
Query: 343 RLRFADQCI 351
RL F D +
Sbjct: 473 RLMFNDMVL 481
>gi|157833779|pdb|1SAT|A Chain A, Crystal Structure Of The 50 Kda Metallo Protease From S.
Marcescens
Length = 471
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 161/349 (46%), Gaps = 48/349 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 25 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 84
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 85 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 142
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 143 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGDPTY-A 200
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 201 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 260
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ I +D+GG+D D + I+LN +S+S +GG + N
Sbjct: 261 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGY-TANQRINLNEKSFSDVGGLKGN 319
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 320 VSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 368
>gi|66046392|ref|YP_236233.1| serralysin [Pseudomonas syringae pv. syringae B728a]
gi|63257099|gb|AAY38195.1| Serralysin [Pseudomonas syringae pv. syringae B728a]
gi|330972872|gb|EGH72938.1| serralysin [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 476
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 177/382 (46%), Gaps = 60/382 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ AD++LRD W+ N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAADYILRDDASWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTPRYDSR------Y 98
A ++ W+ V ++F + + D + F + +NG + P +SR Y
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSWY 158
Query: 99 FMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
++ ++ D YG HEIGH LGL HPG YN G P Y D Y
Sbjct: 159 LVDNSYKVNTTPDNGNYG-------RQTLTHEIGHTLGLSHPGDYNAGEGNPSY-KDATY 210
Query: 154 ENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 211 AEDTRGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYG 270
Query: 209 I---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 271 FNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGMVG 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IA+ V+E+ +G SGND++IGN+A N +GND+ G G D+ A + I
Sbjct: 329 NVSIAKGVVVENALGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA---DI 385
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ F + D+N QD + D
Sbjct: 386 FVFGAS---SDSNRAGQDTIRD 404
>gi|167487383|gb|ABZ81090.1| metalloprotease [Serratia nematodiphila]
Length = 473
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 158
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 159 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYN- 216
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 217 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 276
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 277 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 334
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 335 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 384
>gi|330981411|gb|EGH79514.1| serralysin [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 476
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 180/382 (47%), Gaps = 60/382 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ AD++LRD W+ N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAADYILRDDAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTPRYDSR------Y 98
A ++ W+ V ++F + + D + F + +NG + P +SR Y
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSWY 158
Query: 99 FMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
++ N+ D YG + T+ +EIGH LGL HPG YN G P Y D Y
Sbjct: 159 LVDNNYKVNTTPDNGNYG--RPTLT-----NEIGHTLGLSHPGDYNAGEGNPSY-KDATY 210
Query: 154 ENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 211 AEDTHGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYG 270
Query: 209 I---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 271 FNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGMVG 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IA+ V+E+ VG SGND++IGN+A N +GND+ G G D+ A + I
Sbjct: 329 NVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA---DI 385
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ F + D+N QD + D
Sbjct: 386 FVFGAS---SDSNRAGQDTIRD 404
>gi|271500594|ref|YP_003333619.1| Serralysin [Dickeya dadantii Ech586]
gi|270344149|gb|ACZ76914.1| Serralysin [Dickeya dadantii Ech586]
Length = 480
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 167/346 (48%), Gaps = 49/346 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRL-------SFDITELNPNAQEV 54
N K Y+ ++ + R+ W+ I K LT L + D + NA+++
Sbjct: 43 NDKASYSVDQAVSQITRENTTWNGSNILGKSASLTFKFLQSASSTPAGDTGFVKFNAEQI 102
Query: 55 A--RWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYFM---------- 100
A + AL W+ V +LTF E + + ++I F + YD++ +
Sbjct: 103 AQAKLALQSWADVANLTFTEVTGNKSANITFGNYTRDASGNLDYDTQAYAYYPGQYQGAG 162
Query: 101 --EINFDKADVWRYGI---GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND--Y 153
N++++++ G G+ T+ HEIGHALGL HP YN G N Y
Sbjct: 163 SSWYNYNQSNIRSPGTEDYGRQTLT-----HEIGHALGLSHPAEYNAGEGDISYKNSAAY 217
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-- 210
DS S+MSY+ +D+ D Y A P++ DI A+QK+YGA + G+ +Y
Sbjct: 218 AEDSRQFSIMSYWDVEDTGGDFRGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFHSN 277
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
I +++D+GG+D D + G N I+LN ++S +GG + N++
Sbjct: 278 TDRDFYTATDSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGAFSDVGGLKGNVS 334
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IA IE+ +G SGND+++GNSA+N+ +GNDV G +G DT
Sbjct: 335 IAHGVTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTL 380
>gi|292490040|ref|YP_003532934.1| zinc-binding metalloprotease PrtA [Erwinia amylovora CFBP1430]
gi|292901057|ref|YP_003540426.1| zinc-binding metalloprotease [Erwinia amylovora ATCC 49946]
gi|4826415|emb|CAB42873.1| zinc-binding metalloprotease [Erwinia amylovora]
gi|291200905|emb|CBJ48042.1| zinc-binding metalloprotease [Erwinia amylovora ATCC 49946]
gi|291555481|emb|CBA23978.1| zinc-binding metalloprotease PrtA [Erwinia amylovora CFBP1430]
Length = 478
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 158/348 (45%), Gaps = 45/348 (12%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDI-----------TELNPN 50
N K Y ++ + R +Q W+ + K +T S++ + NP
Sbjct: 31 NNKTSYDIDQAGKEIARGEQSWNGVHVTDKGATVTYSFPSWEPGKKNFNGDTIHSAFNPE 90
Query: 51 AQEVARWALGEWSKVVDLTFEETS--IHSDIKF----ISSNNGYVCTPR--------YDS 96
Q + +L WS V ++ F E S +S+I F Y P+ YD
Sbjct: 91 QQAQTKLSLQSWSDVANIKFVEVSGDQYSNITFGNIVAPDTQAYAMLPQSTDNGKIIYDD 150
Query: 97 RYF---MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
R F + + +D G HEIGH LGL HPG YN G P Y D
Sbjct: 151 RSFDISGQSWYSTSDPENLAPELGNYGRLTLTHEIGHTLGLNHPGDYNAGEGNPSY-ADA 209
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y DS S MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 210 TYAEDSRQFSDMSYWNEPNTGGDNGGNYSAAPLIDDIAAIQHLYGANMTTRTGDTVYGFH 269
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNM 260
+ + I ++D+GG+D LD + G +N I+LN S+S +GG + N+
Sbjct: 270 SNTDRDFYTAKDSNQKLIFAVWDAGGNDTLDFS--GYSQNQRINLNEGSFSDVGGLKGNI 327
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+IA IE+ +G +GNDV++GN+A+NV +GNDV G G D +
Sbjct: 328 SIAAGATIENAIGGAGNDVIVGNAADNVIKGGAGNDVIYGGGGQDQLW 375
>gi|157833854|pdb|1SRP|A Chain A, Structural Analysis Of Serratia Protease
Length = 471
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 25 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 84
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 85 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 142
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 143 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTY-R 200
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 201 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 260
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 261 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 318
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 319 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 368
>gi|199583196|gb|ACH90152.1| insecticidal protein [Serratia marcescens]
Length = 487
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 158
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 159 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTY-R 216
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 217 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 276
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 277 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 334
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 335 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 384
>gi|32172419|sp|P07268|PRZN_SERME RecName: Full=Serralysin; AltName: Full=Extracellular
metalloproteinase; AltName: Full=Serratiopeptidase;
Short=Serrapeptase; Short=Serrapeptidase; AltName:
Full=Zinc proteinase; Flags: Precursor
Length = 487
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 158
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 159 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTY-R 216
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 217 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 276
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 277 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 334
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 335 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 384
>gi|1431808|pdb|1SMP|A Chain A, Crystal Structure Of A Complex Between Serratia Marcescens
Metallo-Protease And An Inhibitor From Erwinia
Chrysanthemi
Length = 471
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 25 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 84
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 85 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 142
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 143 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYN- 200
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 201 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 260
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 261 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 318
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 319 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 368
>gi|3114529|pdb|1AF0|A Chain A, Serratia Protease In Complex With Inhibitor
Length = 471
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 25 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 84
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 85 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 142
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 143 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGDPTYN- 200
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 201 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 260
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 261 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 318
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 319 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 368
>gi|117655427|gb|ABK55613.1| insecticidal protein [Serratia marcescens]
Length = 487
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 158
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 159 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTY-R 216
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 217 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 276
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 277 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 334
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G SGNDV++GN+ANNV +GNDV G G D +
Sbjct: 335 NVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELW 384
>gi|271500595|ref|YP_003333620.1| Serralysin [Dickeya dadantii Ech586]
gi|270344150|gb|ACZ76915.1| Serralysin [Dickeya dadantii Ech586]
Length = 478
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 159/363 (43%), Gaps = 63/363 (17%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLT-----THRLSFD----ITELNPNAQ 52
N KP Y+ E + RD W+ + K LT + R + D + N
Sbjct: 42 NGKPSYSLEEAGAQITRDNVSWNGANVFGKSANLTFKFLQSARATPDGDTGFVKFNAAQI 101
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR--YDSRYFMEI-------- 102
A+ AL W+ V ++TF E + + N + R Y S+ + +
Sbjct: 102 SQAKLALQSWADVANITFTEVTGNQSANVTFGNYTRDSSGRLDYGSQAYAYLPGSGSASG 161
Query: 103 ---------NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
N D YG HEIGHALGL HPG YN G P Y D
Sbjct: 162 STWYNYNVDNIRSPDTMEYG-------RQTLTHEIGHALGLNHPGDYNAGVGNPSY-SDV 213
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y D+ S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+ IY
Sbjct: 214 TYAEDTRQFSIMSYWSEKNTGGDFKGHYAAGPMLDDIEAIQRLYGANMSTRTGDTIYGFH 273
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKN 259
I +++D+GG+D D + G N I+LN ++S +GG + N
Sbjct: 274 SNTDRDFYTATSSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGAFSDVGGLKGN 330
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYY 310
++IA IE+ +G SGND++IGN ANN +G+D+ G SG DTF Y
Sbjct: 331 ISIAHGVTIENAIGGSGNDLLIGNDANNTLQGGAGDDILYGGGGADRLYGGSGKDTFVYT 390
Query: 311 APS 313
A S
Sbjct: 391 AVS 393
>gi|307131039|ref|YP_003883055.1| secreted protease B [Dickeya dadantii 3937]
gi|306528568|gb|ADM98498.1| Secreted protease B precursor [Dickeya dadantii 3937]
Length = 481
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 163/349 (46%), Gaps = 54/349 (15%)
Query: 3 NIKPVYTTER-IADHLLRDQY-WSNYFIRYKPDVLTTHRL-SFDIT--------ELNPNA 51
N KP YTT++ +++ L R W+ + K LT L +F T + P
Sbjct: 43 NGKPSYTTDKAVSEGLTRPHTTWNGDNVFGKAANLTYSFLNTFSSTPNGHTGPVKFTPVQ 102
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-----NGYVCT------------PRY 94
+ A+ +L W+ +LTF E S + +N +G + T P
Sbjct: 103 MQQAKLSLQSWADAANLTFTEVSPNQKANITFANYTRNADGSLNTDTQAYAAYPGTHPVS 162
Query: 95 DSRYFM--EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S +F + + D YG H+ HEIGHALGL HP YN G N
Sbjct: 163 GSAWFNYNQSSIRNPDTDEYG-------RHSFTHEIGHALGLSHPAEYNAGEGDISYKNS 215
Query: 153 --YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI 209
Y DS S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+ +Y
Sbjct: 216 AAYAEDSRQFSIMSYWEVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGF 275
Query: 210 E---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEK 258
+ +++D+GG+D D + G N I+LN S+S +GG +
Sbjct: 276 NSNTDRDFYTATNSSKALVFSVWDAGGNDTFDFS---GYSNNQRINLNEGSFSDVGGLKG 332
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
N++IA IE+ +G SGND++IGN A+N+ +G+DV GS+G DT
Sbjct: 333 NVSIAHGVTIENAIGGSGNDILIGNGADNILQGGAGDDVLYGSTGADTL 381
>gi|28948368|pdb|1H71|P Chain P, Psychrophilic Protease From Pseudoalteromonas 'tac Ii 18'
Length = 463
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 48/349 (13%)
Query: 1 MHNIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNP 49
+ N KP +T +++AD L R W + Y P V R ++ +
Sbjct: 24 LVNGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLGTFSQFSA 83
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNGYVC-------TPRYDS 96
+E A+ +L W+ V +TF E H S++NG + + +S
Sbjct: 84 LQKEQAKLSLESWADVAKVTFTEGPAARGDDGHQTFANFSASNGGAAFAYLPNSSRKGES 143
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYE 154
Y + ++ G+G HEIGH LGL HPG YN G P Y D Y
Sbjct: 144 WYLINKDYQVNKT----PGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYA 198
Query: 155 NDSFLTSVMSYFMPQDS----MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKI 209
D+ SVMSY+ +++ Y + P++ DI AVQK+YGA + ++ +Y
Sbjct: 199 EDTRAYSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGF 258
Query: 210 ---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKN 259
I +++D GG+D LD + G +N I+L S+S +GG N
Sbjct: 259 NSTADRDFYSATSSTDKLIFSVWDGGGNDTLDFS--GFSQNQKINLTAGSFSDVGGMTGN 316
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IAQ IE+ +G SGND++IGN A NV +GND+ G G D +
Sbjct: 317 VSIAQGVTIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGADVLW 365
>gi|238791578|ref|ZP_04635216.1| Serralysin [Yersinia intermedia ATCC 29909]
gi|238729194|gb|EEQ20710.1| Serralysin [Yersinia intermedia ATCC 29909]
Length = 485
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 153/336 (45%), Gaps = 37/336 (11%)
Query: 27 FIRYKPDVLTTHRLSFD---------ITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
FI++ P+ +T + S TE+ P E A LG +S D ++
Sbjct: 94 FIKFNPEQVTQTKFSLQSWSDVANIHFTEVGPT--EKANITLGNYSLTADGQLAGGQAYT 151
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+ S NG + Y M+ N + + YG HE+GHALGL HP
Sbjct: 152 SSSYTSGPNGRIADTSTWYNYNMD-NIREPEKMEYG-------RLTLAHELGHALGLSHP 203
Query: 138 GSYNGGYP-VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+YN G + D Y D+ S+MSY+ S D Y +TP+V DI A+Q++YG
Sbjct: 204 ANYNAGQGNTFAKDAVYGEDTRQFSIMSYWDAWQSGADHQGHYASTPLVDDIFAIQRLYG 263
Query: 197 APKGS-LGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYIDLN 246
A + +NIY + F T ++D+GG D D + V I+L
Sbjct: 264 ANMDTRTEDNIYGFNSNTQRDSFTLTDSSDQKVFSVWDAGGIDTFDFSGYS-VDQRINLE 322
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++S +GG + N++IA + IE+ +G SGNDV++GN A+N +GNDV G G D
Sbjct: 323 EAAFSDVGGLKANVSIAANVTIENAIGGSGNDVLVGNGADNELHGGAGNDVLFGGGGADK 382
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + S ++ R D++ D++ D E
Sbjct: 383 LWGGSGSDIFVFGR------TTDSSPSAPDWIMDFE 412
>gi|3169102|emb|CAA76737.1| serralysin [Pseudomonas sp. 'TAC II 18']
Length = 480
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 48/349 (13%)
Query: 1 MHNIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNP 49
+ N KP +T +++AD L R W + Y P V R ++ +
Sbjct: 41 LVNGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLGTFSQFSA 100
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNGYVC-------TPRYDS 96
+E A+ +L W+ V +TF E H S++NG + + +S
Sbjct: 101 LQKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGES 160
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYE 154
Y + ++ G+G HEIGH LGL HPG YN G P Y D Y
Sbjct: 161 WYLINKDYQVNKT----PGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYA 215
Query: 155 NDSFLTSVMSYFMPQDS----MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKI 209
D+ SVMSY+ +++ Y + P++ DI AVQK+YGA + ++ +Y
Sbjct: 216 EDTRAYSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGF 275
Query: 210 ---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKN 259
I +++D GG+D LD + G +N I+L S+S +GG N
Sbjct: 276 NSTADRDFYSATSSTDKLIFSVWDGGGNDTLDFS--GFSQNQKINLTAGSFSDVGGMTGN 333
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IAQ IE+ +G SGND++IGN A NV +GND+ G G D +
Sbjct: 334 VSIAQGVTIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGADVLW 382
>gi|312174231|emb|CBX82484.1| zinc-binding metalloprotease PrtA [Erwinia amylovora ATCC BAA-2158]
Length = 478
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 158/348 (45%), Gaps = 45/348 (12%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDI-----------TELNPN 50
N K Y ++ + R +Q W+ + K +T S++ + NP
Sbjct: 31 NNKTSYDIDQAGKEIARGEQSWNGVHVTDKGATVTYSFPSWEPGKKNFNGDTIHSAFNPE 90
Query: 51 AQEVARWALGEWSKVVDLTFEETS--IHSDIKF----ISSNNGYVCTPR--------YDS 96
Q + +L WS V ++ F E S +S+I F Y P+ YD
Sbjct: 91 QQAQTKLSLQSWSDVANIKFVEVSGDQYSNITFGNIVAPDTQAYAMLPQSTDNGKIIYDD 150
Query: 97 RYF---MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
R + + + +D G HEIGH LGL HPG YN G P Y D
Sbjct: 151 RSYDISGQSWYSTSDPENLAPELGNYGRLTLTHEIGHTLGLNHPGDYNAGEGNPSY-ADA 209
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y DS S MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 210 TYAEDSRQFSDMSYWNEPNTGGDNGGNYSAAPLIDDIAAIQHLYGANMTTRTGDTVYGFH 269
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNM 260
+ + I ++D+GG+D LD + G +N I+LN S+S +GG + N+
Sbjct: 270 SNTDRDFYTAKDSNQKLIFAVWDAGGNDTLDFS--GYSQNQRINLNEGSFSDVGGLKGNI 327
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+IA IE+ +G +GNDV++GN+A+NV +GNDV G G D +
Sbjct: 328 SIAAGATIENAIGGAGNDVIVGNAADNVIKGGAGNDVIYGGGGQDQLW 375
>gi|28948337|pdb|1G9K|A Chain A, Crystal Structure Of A Psychrophilic Alkaline Protease
From Pseudomonas Tac Ii 18
gi|34811434|pdb|1O0Q|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 1 Mm Edta
gi|34811435|pdb|1O0T|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 5 Mm Edta (5
Days)
gi|34811441|pdb|1OM6|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 5mm Edta (2
Months)
gi|34811442|pdb|1OM7|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Soaked In 85 Mm Edta
gi|34811443|pdb|1OM8|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallyzed With 10 Mm Edta
gi|34811444|pdb|1OMJ|A Chain A, Crystal Structure Of A Psychrophilic Alkaline Protease
From Pseudomonas Tac Ii 18
Length = 463
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 48/349 (13%)
Query: 1 MHNIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNP 49
+ N KP +T +++AD L R W + Y P V R ++ +
Sbjct: 24 LVNGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLGTFSQFSA 83
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNGYVC-------TPRYDS 96
+E A+ +L W+ V +TF E H S++NG + + +S
Sbjct: 84 LQKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGES 143
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYE 154
Y + ++ G+G HEIGH LGL HPG YN G P Y D Y
Sbjct: 144 WYLINKDYQVNKT----PGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYA 198
Query: 155 NDSFLTSVMSYFMPQDS----MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKI 209
D+ SVMSY+ +++ Y + P++ DI AVQK+YGA + ++ +Y
Sbjct: 199 EDTRAYSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGF 258
Query: 210 ---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKN 259
I +++D GG+D LD + G +N I+L S+S +GG N
Sbjct: 259 NSTADRDFYSATSSTDKLIFSVWDGGGNDTLDFS--GFSQNQKINLTAGSFSDVGGMTGN 316
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IAQ IE+ +G SGND++IGN A NV +GND+ G G D +
Sbjct: 317 VSIAQGVTIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGADVLW 365
>gi|4063015|gb|AAD09851.1| protease PrtA [Pseudomonas fluorescens]
Length = 477
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 154/354 (43%), Gaps = 60/354 (16%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP Y+ +++A LLRD + L H +S ++ N
Sbjct: 38 NGKPSYSVDQVATQLLRDGAAYRDVNGNGKIDLTYTFLTSASSSTLNKHGIS-GFSQFNA 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
++ A A+ WS V ++TF E + D N GY T
Sbjct: 97 QQKDQAVLAMQSWSDVANVTFTEKATGGDTHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 156
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGV 149
Y + N D+ YG HEIGH LGL HPG YN G P Y
Sbjct: 157 SWYLTNSSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN- 207
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGN 204
D Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 208 DATYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLLDDIAAIQKLYGANYNTRAGD 267
Query: 205 NIYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIG 254
Y + +++D GG+D LD + G +N I+LN S+S +G
Sbjct: 268 TTYGFNSNTGRDFYSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLNEASFSDVG 325
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G N++IA+ IE+ G +GND++IGN+A NV +GND+ G G D +
Sbjct: 326 GLVGNVSIAKGVTIENAFGGAGNDLIIGNNAANVIKGGAGNDIIYGGGGADQLW 379
>gi|131060|sp|P16316|PRTB_ERWCH RecName: Full=Secreted protease B; Short=ProB; Flags: Precursor
gi|148487|gb|AAA63637.1| neutral protease large subunit [Erwinia chrysanthemi]
gi|148494|gb|AAA24861.1| protease B precursor [Erwinia chrysanthemi]
Length = 481
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 162/349 (46%), Gaps = 54/349 (15%)
Query: 3 NIKPVYTTER-IADHLLRDQY-WSNYFIRYKPDVLTTHRL-SFDIT--------ELNPNA 51
N KP YTT++ +++ L R W+ + K LT L +F T + P
Sbjct: 43 NGKPSYTTDKAVSEGLTRPHTTWNGDNVFGKAANLTYSFLNTFSSTPNGHTGPVKFTPVQ 102
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-----NGYVCT------------PRY 94
+ A+ +L W+ +LTF E S + +N +G + T P
Sbjct: 103 MQQAKLSLQSWADAANLTFTEVSPNQKANITFANYTRNADGSLNTDTQAYAAYPGTHPVS 162
Query: 95 DSRYFM--EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S +F + + D YG H+ HEIGHALGL HP YN G N
Sbjct: 163 GSAWFNYNQSSIRNPDTDEYG-------RHSFTHEIGHALGLSHPAEYNAGEGDISYKNS 215
Query: 153 --YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI 209
Y DS S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+ +Y
Sbjct: 216 AAYAEDSRQFSIMSYWEVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGF 275
Query: 210 E---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEK 258
+ +++D+GG D D + G N I+LN S+S +GG +
Sbjct: 276 NSNTDRDFYTATNSSKALVFSVWDAGGTDTFDFS---GYSNNQRINLNEGSFSDVGGLKG 332
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
N++IA IE+ +G SGND++IGN A+N+ +G+DV GS+G DT
Sbjct: 333 NVSIAHGVTIENAIGGSGNDILIGNGADNILQGGAGDDVLYGSTGADTL 381
>gi|54038901|sp|P82115|PRTA_PHOAZ RecName: Full=Protease prtA; AltName: Full=Secreted alkaline
metalloproteinase
gi|42541022|gb|AAS19409.1| secreted alkaline metalloprotease [Photorhabdus sp. Az29]
Length = 483
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 150/309 (48%), Gaps = 35/309 (11%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKF--- 81
F+ +PD + H F + N + A+ ++ W+ V ++ F ET S + I F
Sbjct: 78 FLESEPDNMPWHITGF--SAFNEEQRTAAKLSIQSWTDVANINFTETTDSDKAHITFGFF 135
Query: 82 ---ISSNNGYVCTPRYDSRY------FMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ + + P +S+ F + D+ G G+ T HEIGH L
Sbjct: 136 DASLTGSYAFAYLPSPESKQSGTWYNLKSRTFSENDIGVNGYGRQTFT-----HEIGHTL 190
Query: 133 GLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
GL HP +YN P Y Y DS +VMSYF +++ D Y + P+++DI
Sbjct: 191 GLEHPAAYNASDKERPTYKKSATYFEDSRAYTVMSYFGEKNTRTDFKGIYSSAPLLNDIS 250
Query: 190 AVQKIYGAPKGSLGNN-IYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
A+Q++YGA + ++ +Y + ++S + T +D+GG+D D +
Sbjct: 251 AIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDENSKLLFTAWDAGGNDTFDFSGFT-Q 309
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I+LN S+S +GG + N++IA+ IE+ +G SGND++IGN A N+ +G+D+
Sbjct: 310 DQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDILIGNDAENILKGGAGDDIIY 369
Query: 300 GSSGLDTFF 308
G G D +
Sbjct: 370 GGLGADQLW 378
>gi|4115623|dbj|BAA36461.1| alkaline protease [Pseudomonas fluorescens]
Length = 482
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 161/358 (44%), Gaps = 53/358 (14%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP +T ++ ADHLLR+ + + H ++ ++ N
Sbjct: 38 NGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASNATMNKHGIT-GFSQFNT 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P +++Y E
Sbjct: 97 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNAKY-NE 155
Query: 102 INFDKADVW-----RYGIGKGTILS----HNALHEIGHALGLMHPGSYNGGY--PVYGVD 150
D W Y K L+ HEIGH LGL HPG YN G P Y D
Sbjct: 156 SGLDGTS-WYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-KD 213
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
DY D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 214 ADYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGANYNTRAGDT 273
Query: 206 IYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
Y + + +++D GG+D LD + G +N I+LN S+S +GG
Sbjct: 274 TYGFNSNTGRDFLSATSSADKLVFSVWDGGGNDTLDFS--GFTQNQKINLNETSFSDVGG 331
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N++IA+ +E+ G SGND++IGN+A N+ +GND+ G G D + A S
Sbjct: 332 LVGNVSIAKGVTVENAFGGSGNDLLIGNAAANILKGGAGNDIIYGGGGADQLWGGAGS 389
>gi|262093149|gb|ACY25898.1| alkaline metalloprotease [Flavobacterium sp. YS-80-122]
Length = 480
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 171/382 (44%), Gaps = 56/382 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ AD L R W S F+ P + L + +
Sbjct: 43 NGKPSFTVDQAADQLTRSGASWYDLNGDGVINLSYTFLTSPPPGYASRGLG-TFSSFSGL 101
Query: 51 AQEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNGYVC-------TPRYDSR 97
+E A+ +L W+ V +TF E H S++NG + + +S
Sbjct: 102 QKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGESW 161
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYEN 155
Y + ++D G+G HEIGH LGL HPG YN G P Y D Y
Sbjct: 162 YLINKDYDVNKT----PGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPSY-RDAVYGE 216
Query: 156 DSFLTSVMSYFMPQDS----MMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI- 209
D+ SVMSY+ +++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 217 DTRAYSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANMETRAGDTVYGFN 276
Query: 210 --------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNM 260
I +++D GG+D LD + G +N I+L S+S +GG N+
Sbjct: 277 STADRDYYSATSATDKLIFSVWDGGGNDTLDFS--GFSQNQKINLAAGSFSDVGGMTGNV 334
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+IAQ IE+ +G SGND+++GN+A+N+ +GND+ G G D + + S + +YR
Sbjct: 335 SIAQGVTIENAIGGSGNDLLLGNAASNILKGGAGNDIIYGGGGADKLWGGSGSDTF-VYR 393
Query: 321 FENAIIVYDANEHKQDFLSDVE 342
V D+ D L D +
Sbjct: 394 -----EVSDSTPKAADTLMDFQ 410
>gi|157368459|ref|YP_001476448.1| serralysin [Serratia proteamaculans 568]
gi|157320223|gb|ABV39320.1| Serralysin [Serratia proteamaculans 568]
Length = 504
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 161/349 (46%), Gaps = 48/349 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 58 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPAKLTFSFPDYKFSSTNVAGDTGLSKFSAE 117
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYD-----SRYFMEINFD 105
Q+ A+ +L WS V +LTF E + N YD + +
Sbjct: 118 QQQQAKLSLQSWSDVANLTFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIYQ 177
Query: 106 KADV----WRYGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGVD 150
D+ W Y + + + H A HEIGHALGL HPG YN G P Y D
Sbjct: 178 GQDLGGQTW-YNVNQSNV-KHPASEDYGRQTFTHEIGHALGLSHPGEYNAGEGNPTYN-D 234
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK- 208
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+++Y
Sbjct: 235 VTYAEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDSVYGF 294
Query: 209 --------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKN 259
+ I +D+GG+D D + G N I+LN S+S +GG + N
Sbjct: 295 NSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNETSFSDVGGLKGN 352
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IA IE+ +G SGNDV++GN+ NNV +GNDV G G D +
Sbjct: 353 VSIAAGVTIENAIGGSGNDVIVGNAVNNVLKGGAGNDVLFGGGGADELW 401
>gi|288963034|ref|YP_003453313.1| hypothetical protein AZL_f00090 [Azospirillum sp. B510]
gi|288915286|dbj|BAI76769.1| hypothetical protein AZL_f00090 [Azospirillum sp. B510]
Length = 827
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 107/207 (51%), Gaps = 10/207 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-A 457
FD+ YL + DL FG + AAA HY G EGR+ F AL Y+ ++ DL+ A
Sbjct: 208 FDARGYLAANRDLAVAFGDNVVAAAAHYAWSGRNEGRSLGGFDALGYLGANPDLLGVVGA 267
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
DA + H+ G EGR FD Y YL S D+ V+G D AA HY G++E
Sbjct: 268 DANAALH----HYLVSGAREGRTAGFDPYGYLASNPDVLAVYGLDPVAALIHYGQSGLRE 323
Query: 518 GRNPDAFKALEYIASHEDLINAFA-DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
GR F AL YIAS+ DLI AF D V+ H+ G EGR ITF+ YL +
Sbjct: 324 GRTATGFDALGYIASYPDLITAFGTDGKAAVR----HYLTSGLAEGRGITFDAAAYLAAN 379
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ G + +AA HYI G +EGR
Sbjct: 380 PDVAAATGGNPAAAEAHYIIAGRREGR 406
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 126/275 (45%), Gaps = 24/275 (8%)
Query: 304 LDTFFYYAPSYLYKI----YRFENAIIV-YDANEHK--------QDFLSDVERLRFADQC 350
+D Y Y + +R E ++V D + D L+DVE + D
Sbjct: 141 IDRAIYGTDPRRYALQDGSHRAETPVVVALDGGGRRYAVVSSRSADVLTDVEMVTI-DGR 199
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYD 409
++ Y A+ DL G +V + H+ G +EGR + FD+ YLG+
Sbjct: 200 TAALVAFAFDARGYLAANRDLAVAFGDNVVAAAAHYAWSGRNEGRSLGGFDALGYLGANP 259
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
DL V G+D AA HY+ G +EGR F Y+AS+ D++ + P + H
Sbjct: 260 DLLGVVGADANAALHHYLVSGAREGRTA-GFDPYGYLASNPDVLAVYGLDPVAALI---H 315
Query: 470 FSNFGCEEGRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ G EGR T FD+ Y+ SY DL FG+D AA RHY+T G+ EGR F A
Sbjct: 316 YGQSGLREGRTATGFDALGYIASYPDLITAFGTDGKAAVRHYLTSGLAEGRGI-TFDAAA 374
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
Y+A++ D+ A P +A H+ G EGR
Sbjct: 375 YLAANPDVAAATGGNPAAAEA---HYIIAGRREGR 406
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLRN 497
AF A Y+A++ DL AF D V H++ G EGR + FD+ YLG+ DL
Sbjct: 207 AFDARGYLAANRDLAVAFGDN---VVAAAAHYAWSGRNEGRSLGGFDALGYLGANPDLLG 263
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
V G+D AA HY+ G +EGR F Y+AS+ D++ + P A H+
Sbjct: 264 VVGADANAALHHYLVSGAREGRTA-GFDPYGYLASNPDVLAVYGLDP---VAALIHYGQS 319
Query: 558 GYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
G EGR+ T F+ Y+ SY DL FG+D AA +HY+T G+ EGR +
Sbjct: 320 GLREGRTATGFDALGYIASYPDLITAFGTDGKAAVRHYLTSGLAEGRGI 368
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSYDDLWN 581
AF A Y+A++ DL AF D V A H++ G EGRS+ F+ YL + DL
Sbjct: 207 AFDARGYLAANRDLAVAFGDN---VVAAAAHYAWSGRNEGRSLGGFDALGYLGANPDLLG 263
Query: 582 VFGSDRSAAAQHYITHGMKEGRALG 606
V G+D +AA HY+ G +EGR G
Sbjct: 264 VVGADANAALHHYLVSGAREGRTAG 288
>gi|253988086|ref|YP_003039442.1| hypothetical protein PAU_00605 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779536|emb|CAQ82697.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 484
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 149/309 (48%), Gaps = 35/309 (11%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDIKF--- 81
F+ KPD + H F + N + A+ ++ W+ V ++ F ETS ++I F
Sbjct: 79 FLESKPDDMPWHISEF--SAFNEEQKAAAKLSIQSWADVANINFVETSDVKEANITFGFF 136
Query: 82 ---ISSNNGYVCTPRYDSRYF------MEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ + + PR + F D+ G G+ T HEIGH L
Sbjct: 137 DVSLTGSYAFAYLPRPEKTQLGTWYNAKSRTFTNNDIDVNGYGRQTFT-----HEIGHTL 191
Query: 133 GLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
GL HP YN P Y Y DS +VMSYF +++ D Y + P+++DI
Sbjct: 192 GLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFSEKNTGQDFKGIYSSAPLLNDIS 251
Query: 190 AVQKIYGAPKGSLGNN-IYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
A+Q++YGA + ++ IY + ++S + T +D+GG+D D +
Sbjct: 252 AIQEVYGANNTTRTDDTIYGFNSNTERDFYTAKDENSKLLFTAWDAGGNDTFDFSGFTQD 311
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A+N +G+D+
Sbjct: 312 QR-INLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDADNTLKGGAGDDIIY 370
Query: 300 GSSGLDTFF 308
G G D +
Sbjct: 371 GGLGADNLW 379
>gi|330958198|gb|EGH58458.1| alkaline metalloendoprotease [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 476
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 172/384 (44%), Gaps = 64/384 (16%)
Query: 3 NIKPVYTTERIADHLLRD-QYWS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ A+++LRD W+ N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAANYILRDDASWADRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFI--------SSNNGYVCTPRYDSR------Y 98
A ++ W+ V ++F + + D S + P +SR Y
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYTDGSSGGAAFAYLPSGNSRTDGQSWY 158
Query: 99 FMEINFDK---ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDY 153
+ ++ + D YG HEIGH LGL HPG YN G P Y D Y
Sbjct: 159 LINSSYQQNVSPDNGNYG-------RQTLTHEIGHTLGLSHPGDYNAGEGNPTYN-DVSY 210
Query: 154 ENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP----------- 198
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA
Sbjct: 211 AEDTRGYSVMSYWSESNTDQNFVKGGAASYSSAPLLDDIAAVQQLYGANMSTRATDTVYG 270
Query: 199 -KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGY 256
+ G + Y S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 271 FNSTAGRDFY--SATSAASKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGM 326
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N++IA++ V+E+ +G SGND++IGNSA N +GND+ G G D+ A +
Sbjct: 327 VGNVSIAKNVVVENAIGGSGNDLLIGNSAANDLKGGAGNDIIYGGGGADSLTGGAGA--- 383
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
I+ F + D+N QD + D
Sbjct: 384 DIFVFGAS---SDSNRAAQDTIRD 404
>gi|3646411|emb|CAA07697.1| metalloprotease [Pseudomonas tolaasii]
Length = 477
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 159/353 (45%), Gaps = 58/353 (16%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP +T ++ ADHLLRD + K D+ T S +N NAQ
Sbjct: 38 NGKPSWTVDQAADHLLRDGASYKELNHNGKIDLTYTFLTSATTATMNKHGISGFSQFNAQ 97
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V +++F E++ D +N GY T
Sbjct: 98 QKAQAVLAMQSWADVANVSFTESASGGDTHMTFANYSGGQAGAAAFAYLPGTGAGYDGTS 157
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVD 150
Y + +N DV YG HEIGH LGL HPG YN G P Y D
Sbjct: 158 WYLTNSSYTVN-KTPDVNNYG-------RQTLTHEIGHTLGLAHPGDYNAGTGNPTY-KD 208
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
DY D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 209 ADYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDT 268
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
Y + +++D GG+D LD + G +N I+L S+ +GG
Sbjct: 269 TYGFNSNTGRDFYSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLTEGSFFDVGG 326
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++I + +E+ G SGND++IGN+A N+ +GND+ G G D +
Sbjct: 327 LVGNVSIGKGVTVENAFGGSGNDLIIGNNAVNIIKGGAGNDIIYGGGGADQLW 379
>gi|157370627|ref|YP_001478616.1| serralysin [Serratia proteamaculans 568]
gi|157322391|gb|ABV41488.1| Serralysin [Serratia proteamaculans 568]
Length = 490
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 163/361 (45%), Gaps = 59/361 (16%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDITELNPN----------- 50
N KP + E + R +Q W+ + K +T +D + N N
Sbjct: 31 NNKPSFGVEEAGKQIARSEQTWNGIHVTGKGATVTYSFPDWDYNQSNLNFRFGSNNQDTG 90
Query: 51 -------AQEVARWALGEWSKVVDLTFEETSI--HSDIKFIS---SNNGYVCTP------ 92
+ A+ +L W+ V +LTF E + S+I F + S Y P
Sbjct: 91 LSAFTAEQKAQAKLSLQSWADVANLTFVEVAPDQKSNITFGNYEGSGQAYAIKPFSGAGN 150
Query: 93 -----RYDSRYFMEINFDKADVWRYGI------GKGTILSHNALHEIGHALGLMHPGSYN 141
D + + IN+D AD R G+ G + HE+GH LGL HPG YN
Sbjct: 151 DYRGHNTDGQSWFNINYDYADP-RDGVYANLHPELGNYGRLSITHELGHTLGLDHPGKYN 209
Query: 142 G---GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
P Y + N Y D+ SVMSY+ + D + A P+V DI A+Q +YGA
Sbjct: 210 ADENNPPNYSMAN-YAEDTRQFSVMSYWDESLTGGDNGGHFAAAPLVDDIAAIQYLYGAN 268
Query: 199 KGS-LGNNIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNT 247
+ G+ +Y + + + +++D+GG+D LD + G +N I+L
Sbjct: 269 TTTRTGDTVYGFNSNTGRDFYTLTDSNQKLVFSVWDAGGNDTLDFS--GYTQNQRINLTE 326
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+S +GG + N++IA VIE+ +G SGNDV++GN A N+ +GNDV G G D
Sbjct: 327 GSFSDVGGLKGNVSIAVGAVIENAIGGSGNDVIVGNDAANIIHGGAGNDVIYGGGGQDQL 386
Query: 308 F 308
F
Sbjct: 387 F 387
>gi|28395571|gb|AAO39136.1| secreted alkaline metalloproteinase [Photorhabdus luminescens]
Length = 483
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 150/309 (48%), Gaps = 35/309 (11%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKF--- 81
F+ +PD + H F + N + A+ ++ W+ V ++ F ET S + I F
Sbjct: 78 FLESEPDNMPWHIAGF--SAFNEEQRTAAKLSIQSWTDVANINFTETTDSDKAHITFGFF 135
Query: 82 ---ISSNNGYVCTPRYDSRY------FMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ + + P +S+ F + D+ G G+ T HEIGH L
Sbjct: 136 DASLTGSYAFAYLPSPESKQSGTWYNLKSRTFSENDIGVNGYGRQTFT-----HEIGHTL 190
Query: 133 GLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
GL HP +YN P Y Y DS +VMSYF +++ D Y + P+++DI
Sbjct: 191 GLEHPAAYNASDKERPTYKKSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDIS 250
Query: 190 AVQKIYGAPKGSLGNN-IYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
A+Q++YGA + ++ +Y + ++S + T +D+GG+D D +
Sbjct: 251 AIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDENSKLLFTAWDAGGNDTFDFSGFT-Q 309
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I+LN S+S +GG + N++IA+ IE+ +G SGND++IGN A+N +G+D+
Sbjct: 310 DQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDILIGNDADNTLKGGAGDDIIY 369
Query: 300 GSSGLDTFF 308
G G D +
Sbjct: 370 GGLGADQLW 378
>gi|70729851|ref|YP_259590.1| protease PrtA [Pseudomonas fluorescens Pf-5]
gi|68344150|gb|AAY91756.1| protease PrtA [Pseudomonas fluorescens Pf-5]
Length = 515
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 174/395 (44%), Gaps = 76/395 (19%)
Query: 3 NIKPVYTTERIADHLLRDQY-W-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ AD +LR W S F+ KP SF +E +
Sbjct: 76 NGKPSFTADQAADSILRKGLSWHDQNGDGKIDLSYSFLTEKPANYNPALGSF--SEFSAL 133
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCT-----------PRYDSRYF 99
+ A +L W+ V ++TF E + D +S N V T YD + +
Sbjct: 134 QKAQALLSLQSWADVANVTFTEAAKGGD-GHMSFGNYNVSTGGAAFAYLPSGSSYDGQSW 192
Query: 100 MEINFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYEN 155
IN D +R G G HEIGH+LGL HPG YN G P Y D Y
Sbjct: 193 YLIN----DQYRVNETPGNGNYGRQTLTHEIGHSLGLSHPGVYNAGSGSPTYN-DVTYAQ 247
Query: 156 DSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP------------K 199
D+ S+MSY+ QD D Y + P++ DIVAVQK+YGA
Sbjct: 248 DTRGYSLMSYWSESNTGQDFSKDGGGAYASAPLLDDIVAVQKLYGANLETRADDTVYGFN 307
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ G + Y + ++D GG+D LD + G +N I+LN +S +GG
Sbjct: 308 SNTGRDFYS--AHSASDKLVFAVWDGGGNDTLDFS--GFTQNQKINLNEGGFSDVGGLVG 363
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFY 309
N++IA +E+ +G SGND++IGN+A N+ +GND+ G +G DTF Y
Sbjct: 364 NVSIAHGVTVENAIGGSGNDLLIGNAAANILEGGAGNDIIYGGGGGDTLWGGAGADTFVY 423
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A A +DA + DF+S +++
Sbjct: 424 GAA-----------ADSTFDAPDWIMDFVSGEDKI 447
>gi|330875816|gb|EGH09965.1| alkaline metalloendoprotease [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 475
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 170/380 (44%), Gaps = 57/380 (15%)
Query: 3 NIKPVYTTERIADHLLRDQY-WS----NYFIRYKPDVLTTHRLSFD-----ITELNPNAQ 52
N KP Y+ ++ A+ +LRD WS N I LT FD + N +
Sbjct: 39 NGKPSYSVDQAANFILRDHAAWSDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQK 98
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFI--------SSNNGYVCTP---RYDSRYFME 101
A ++ W+ V ++F + + D S + P R D + +
Sbjct: 99 AQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSSGGAAFAYLPSGGRTDGQSWYL 158
Query: 102 INFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDS 157
I+ D +R + G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 159 ID----DSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-KDATYAEDT 213
Query: 158 FLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP------------KGS 201
SVMSY+ Q+ + + Y + P++ DI AVQ++YGA +
Sbjct: 214 RGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFNST 273
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNM 260
G + Y S + +++D GG D LD + G +N I+LN S+S +GG N+
Sbjct: 274 AGRDFY--SATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGMVGNV 329
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+IA+ V+E+ +G SGND++IGN+A N +GND+ G G D+ A + I+
Sbjct: 330 SIAKGVVVENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA---DIFV 386
Query: 321 FENAIIVYDANEHKQDFLSD 340
F + D+N QD + D
Sbjct: 387 FGAS---SDSNRAAQDTIRD 403
>gi|229590602|ref|YP_002872721.1| metalloprotease [Pseudomonas fluorescens SBW25]
gi|229362468|emb|CAY49374.1| metalloprotease [Pseudomonas fluorescens SBW25]
Length = 477
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 160/353 (45%), Gaps = 58/353 (16%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N NAQ
Sbjct: 38 NGKPSYTVDQAATQLLRDGATYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 97
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V ++TF E + D N GY T
Sbjct: 98 QKAQAVLAMQSWADVANITFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG--YPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 158 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGEGAPTYN-D 208
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 209 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDT 268
Query: 206 IYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
Y + + +++D GG+D LD + G +N I+LN S+S +GG
Sbjct: 269 TYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLNEASFSDVGG 326
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA+ IE+ G +GND++IGN+A N+ +GND+ G G D +
Sbjct: 327 LVGNVSIAKGVTIENAFGGAGNDLIIGNNAANIIKGGAGNDLIYGGGGADQLW 379
>gi|164665001|gb|ABY65932.1| AprX [Pseudomonas fluorescens]
Length = 477
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 160/353 (45%), Gaps = 58/353 (16%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N NAQ
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 97
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V ++TF E + D N GY T
Sbjct: 98 QKAQAVLAMQSWADVANITFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG--YPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 158 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGEGAPTYN-D 208
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 209 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDT 268
Query: 206 IYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
Y + + +++D GG+D LD + G +N I+LN S+S +GG
Sbjct: 269 TYGFNSNTGRGFLSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLNEASFSDVGG 326
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA+ IE+ G +GND++IGN+A N+ +GND+ G G D +
Sbjct: 327 LVGNVSIAKGVTIENAFGGAGNDLIIGNNAANIIKGGAGNDLIYGGGGADQLW 379
>gi|307131037|ref|YP_003883053.1| secreted protease A [Dickeya dadantii 3937]
gi|306528566|gb|ADM98496.1| Secreted protease A precursor [Dickeya dadantii 3937]
Length = 477
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 161/357 (45%), Gaps = 51/357 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSF-------DITELNPNAQEV 54
N KP Y+ E + + RD W+ + K LT L D + NA +V
Sbjct: 41 NGKPSYSIEDAGEQITRDNVSWNGSNVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQV 100
Query: 55 A--RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS-----RYFMEINFDKA 107
A + AL W+ + ++TF E + + N + R D Y
Sbjct: 101 AQAKLALQSWADLANITFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSASG 160
Query: 108 DVWRYGIGKGTILSHNAL--------HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDS 157
W Y I S + + HEIGHALGL HPG YN G P Y D Y D+
Sbjct: 161 TTW-YNYNVDNIRSPDKMEYGRQTLTHEIGHALGLNHPGDYNAGEGNPTY-SDVTYAEDT 218
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE------ 210
S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+ +Y
Sbjct: 219 RQFSIMSYWSEKNTGGDFKGHYAAGPMLDDIDAIQRLYGANMTTRTGDTVYGFNSNTDRD 278
Query: 211 ---VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQH 265
I +++D+GG+D D + G N I+LN S S +GG + N++IA
Sbjct: 279 FYTATSSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGSLSDVGGLKGNVSIAHG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPS 313
IE+ +G SGND++IGN+A+N+ +G+D+ G SG DTF Y A S
Sbjct: 336 VTIENAIGGSGNDLLIGNNADNILRGGAGDDILYGGGGADRLYGGSGRDTFVYTAVS 392
>gi|251789712|ref|YP_003004433.1| Serralysin [Dickeya zeae Ech1591]
gi|247538333|gb|ACT06954.1| Serralysin [Dickeya zeae Ech1591]
Length = 480
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 156/349 (44%), Gaps = 54/349 (15%)
Query: 3 NIKPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRL-SFDIT--------ELNPNA 51
N KP Y+T++ + L + W+ + K LT L +F T + P
Sbjct: 42 NGKPSYSTDKAVEEGLTRPHTTWNGDNVYGKAANLTYSFLNTFSSTPNGHTGPVKFTPVQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTPRY---- 94
+ + +L WS V +LTF E S + +N Y P
Sbjct: 102 MQQVKLSLQSWSDVANLTFTEVSPNQKANLTFANYTRNADGSIENDTQAYAAYPGQHPLS 161
Query: 95 DSRYFM--EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S +F + + D YG H HEIGH LGL HP YN G N
Sbjct: 162 GSAWFNYNQPSIRNPDTDEYG-------RHTFTHEIGHTLGLSHPAEYNAGEGDISYKNS 214
Query: 153 --YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI 209
Y DS S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+++Y
Sbjct: 215 AAYAEDSRQFSIMSYWDVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDSVYGF 274
Query: 210 E---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEK 258
I +++D+GG+D D + G N I+LN S S +GG +
Sbjct: 275 HSNTDRDFYTANNSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGSLSDVGGLKG 331
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
N++IA IE+ +G SGND+++GN ANNV +G+DV GS+G DT
Sbjct: 332 NVSIAHGVTIENAIGGSGNDLLVGNGANNVLQGGAGDDVLYGSTGADTL 380
>gi|104780724|ref|YP_607222.1| alkaline metalloprotease precursor AprA [Pseudomonas entomophila
L48]
gi|95109711|emb|CAK14412.1| Alkaline metalloprotease precursor AprA [Pseudomonas entomophila
L48]
Length = 485
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 159/354 (44%), Gaps = 61/354 (17%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNY-----------FIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A++LLRD W + F+ P + L ++ +
Sbjct: 43 NGKPSYTVDQAANYLLRDGAAWKDLNKDGTISLSYTFLTKAPSDFYSRGLG-TFSQFSDL 101
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDI-----KFISSNNGYVCTPRYDSRYFMEINFD 105
+ A+ A+ W+ V +TF E + D F +SN G F + FD
Sbjct: 102 QKGQAKLAMQSWADVAKVTFTEAASGGDGHMTFGNFSASNGGAA---------FAYLPFD 152
Query: 106 -----KADVW-----RYGI----GKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGV 149
K + W Y + G G HEIGH LGL HPG YN G P Y
Sbjct: 153 MPGSHKGESWYLINSSYQVNTTPGTGNYGRQTLTHEIGHVLGLSHPGDYNAGEGNPTY-R 211
Query: 150 DNDYENDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GN 204
D Y D+ SVMSY+ Q+ + Y + P++ DI A+QK+YGA + G+
Sbjct: 212 DATYAQDTRGYSVMSYWSESNTGQNFVKAGGQYYASAPLMDDIAAIQKLYGANYATRSGD 271
Query: 205 NIYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIG 254
+Y S + +++D GG+D D + G +N I+LN S+S +G
Sbjct: 272 TVYGFNSNADRDFYSATSSSSKLVFSVWDGGGNDTFDFS--GFTQNQKINLNETSFSDVG 329
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G N++IA+ IE+ G SGND++IGN+ NV +GND+ G G D +
Sbjct: 330 GMIGNVSIAKGVTIENAFGGSGNDLLIGNALANVLKGGAGNDIIYGGGGADQLW 383
>gi|271500593|ref|YP_003333618.1| Serralysin [Dickeya dadantii Ech586]
gi|270344148|gb|ACZ76913.1| Serralysin [Dickeya dadantii Ech586]
Length = 480
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 159/347 (45%), Gaps = 50/347 (14%)
Query: 3 NIKPVYTTER-IADHLLRDQY-WSNYFIRYKPDVLTTHRL-SFDIT--------ELNPNA 51
N KP Y+T++ +++ L R W+ + K LT L +F T + P
Sbjct: 42 NGKPSYSTDKAVSEGLTRPHTTWNGDNVYGKAANLTYSFLDTFTSTPNGHTGPVKFTPVQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-----NGYVCT------------PRY 94
+ + +L W+ V +LTF E S +N +G + T P
Sbjct: 102 MDQVKLSLQSWADVANLTFTEVSPSQKANITFANYTRNADGSLNTDTQAYAAYPGTHPLS 161
Query: 95 DSRYFM--EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S +F + D YG H HEIGHALGL HP YN G N
Sbjct: 162 GSAWFNYNQSTVRNPDTEEYG-------RHTFTHEIGHALGLSHPAEYNAGEGDISYKNS 214
Query: 153 --YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI 209
Y DS S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+ +Y
Sbjct: 215 AAYAEDSRQFSIMSYWDVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGF 274
Query: 210 E---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ +++D+GG+D D + + I+LN ++S +GG + N+
Sbjct: 275 HSNTDRDFYTATDSSKALVFSVWDAGGNDTFDFSGYSDNQR-INLNEGAFSDVGGLKGNV 333
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+IA IE+ +G SGND+++GNSA+NV +GNDV GS G DT
Sbjct: 334 SIAHGVTIENAIGGSGNDILVGNSADNVLQGGAGNDVLFGSVGADTL 380
>gi|28870496|ref|NP_793115.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28853744|gb|AAO56810.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 475
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 172/382 (45%), Gaps = 61/382 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN-----------YFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A+ +LRD W++ F+ KP +F
Sbjct: 39 NGKPSYSVDQAANFILRDDAAWADRDGNGTINLTYTFLTAKPAGFNNALGTFSAFNAQQK 98
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFI------SSNNG--YVCTP---RYDSRYF 99
AQ V ++ W+ V ++F + + D SN G + P R D + +
Sbjct: 99 AQAV--LSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSNGGSAFAYLPSGGRTDGQSW 156
Query: 100 MEINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYEN 155
I +D +R + G HEIGH LGL HPG YN G P Y D Y
Sbjct: 157 YLI----SDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAVDGNPTY-KDATYAE 211
Query: 156 DSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP------------K 199
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA
Sbjct: 212 DTRGYSVMSYWSESNTDQNFVKGGASSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFN 271
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ G + Y S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 272 STAGRDFY--SATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGMVG 327
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IA+ V+E+ +G SGND++IGN+A N +GND+ G G D+ A + I
Sbjct: 328 NVSIAKGVVVENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA---DI 384
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ F + D+N QD + D
Sbjct: 385 FVFGAS---SDSNRAAQDTIRD 403
>gi|62754165|gb|AAX99100.1| secreted alkaline metalloprotease [Photorhabdus temperata subsp.
khanii NC19]
Length = 483
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 148/309 (47%), Gaps = 35/309 (11%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKF--- 81
F+ +PD + H F + N + A+ ++ W+ V ++ F ET S + I F
Sbjct: 78 FLESEPDNMPWHIAGF--SAFNEEQKAAAKLSIQSWTDVANINFTETTDSDKAHITFGFF 135
Query: 82 ---ISSNNGYVCTPRYDSRY------FMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + P +S+ F + D+ G G+ T HEIGH L
Sbjct: 136 DVSLRGSYAFAYLPSPESKQSGTWYNLKSHTFSENDIGVNGYGRQTFT-----HEIGHTL 190
Query: 133 GLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
GL HP YN P Y Y DS +VMSYF +++ D Y + P+++DI
Sbjct: 191 GLEHPADYNASDKERPTYKKSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDIS 250
Query: 190 AVQKIYGAPKGSLGNN-IYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
A+Q++YGA + ++ +Y + ++S + T +D+GG+D D +
Sbjct: 251 AIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDENSKLLFTAWDAGGNDTFDFSGFT-Q 309
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I+LN S+S +GG + N++IA+ IE+ +G SGND++IGN A N+ +G+D+
Sbjct: 310 DQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDILIGNDAENILKGGAGDDIIY 369
Query: 300 GSSGLDTFF 308
G G D +
Sbjct: 370 GGLGADQLW 378
>gi|213970068|ref|ZP_03398200.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato T1]
gi|301381424|ref|ZP_07229842.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato
Max13]
gi|302058422|ref|ZP_07249963.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato K40]
gi|302130329|ref|ZP_07256319.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213925172|gb|EEB58735.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato T1]
gi|331017237|gb|EGH97293.1| alkaline metalloendoprotease [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 475
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 172/382 (45%), Gaps = 61/382 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN-----------YFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A+ +LRD W++ F+ KP +F
Sbjct: 39 NGKPSYSVDQAANFILRDDAAWADRDGNGTINLTYTFLTAKPAGFNNALGTFSAFNAQQK 98
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFI------SSNNG--YVCTP---RYDSRYF 99
AQ V ++ W+ V ++F + + D SN G + P R D + +
Sbjct: 99 AQAV--LSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSNGGSAFAYLPSGGRTDGQSW 156
Query: 100 MEINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGG--YPVYGVDNDYEN 155
I +D +R + G HEIGH LGL HPG YN G P Y D Y
Sbjct: 157 YLI----SDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGDGNPTY-KDATYAE 211
Query: 156 DSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP------------K 199
D+ SVMSY+ Q+ + + Y + P++ DI AVQ++YGA
Sbjct: 212 DTRGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFN 271
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ G + Y S + +++D GG D LD + G +N I+LN S+S +GG
Sbjct: 272 STAGRDFY--SATSASSKVVFSVWDGGGKDTLDFS--GFTQNQKINLNAASFSDVGGMVG 327
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IA+ V+E+ +G SGND++IGN+A N +GND+ G G D+ A + I
Sbjct: 328 NVSIAKGVVVENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGA---DI 384
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ F + D+N QD + D
Sbjct: 385 FVFGAS---SDSNRAAQDTIRD 403
>gi|54038903|sp|Q84F70|PRTA1_PHOLU RecName: Full=Secreted alkaline metalloproteinase
gi|28395574|gb|AAO39138.1| secreted alkaline metalloproteinase [Photorhabdus luminescens]
Length = 486
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 47/315 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDIKF--- 81
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ ++I F
Sbjct: 81 FLESKPDDMPWHISEF--SAFNEKQKAAAKLSIQSWADVANINFVETTDAKEANITFGFF 138
Query: 82 ---ISSNNGYVCTPRYDSRYF------MEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ + + PR + F D+ G G+ T HEIGH L
Sbjct: 139 DVSLTGSYAFAYLPRPEKTQLGTWYNAKSRTFSNNDIDVNGYGRQTFT-----HEIGHTL 193
Query: 133 GLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
GL HP YN P Y Y DS +VMSYF +++ D Y + P+++DI
Sbjct: 194 GLQHPADYNASDEVSPTYKNSATYFEDSRAYTVMSYFSEKNTGQDFKGIYSSAPLLNDIS 253
Query: 190 AVQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDL 233
A+Q +YGA NN + + + ++S + T +D+GG+D D
Sbjct: 254 AIQAVYGA------NNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDF 307
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ + I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +
Sbjct: 308 SGFTQDQR-INLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGA 366
Query: 294 GNDVFDGSSGLDTFF 308
G+D+ G G D +
Sbjct: 367 GDDIIYGGLGADNLW 381
>gi|300724813|ref|YP_003714138.1| Secreted alkaline metalloproteinase [Xenorhabdus nematophila ATCC
19061]
gi|297631355|emb|CBJ92050.1| Secreted alkaline metalloproteinase [Xenorhabdus nematophila ATCC
19061]
gi|310894056|gb|ADP37931.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894060|gb|ADP37933.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894062|gb|ADP37934.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894064|gb|ADP37935.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894066|gb|ADP37936.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894068|gb|ADP37937.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894070|gb|ADP37938.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894072|gb|ADP37939.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894074|gb|ADP37940.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894076|gb|ADP37941.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
Length = 478
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 38/332 (11%)
Query: 10 TERIADHLLRDQY-WSN-------------YFIRYKPDVLTTHRLSFDITELNPNAQEVA 55
+ D L+R Y W+N +F++ D L + N ++ A
Sbjct: 44 ADEAPDELVRGHYKWANKYVNSSGTLELSYHFLKSASDPLMRIFKVSGFSAFNEEQKDAA 103
Query: 56 RWALGEWSKVVDLTFEETS--IHSDIKF------ISSNNGYVCTPRYDSRYFMEINFDKA 107
+ +L WS V ++ F E S ++I F ++ + + P+ + N
Sbjct: 104 KLSLQSWSDVANIKFTEVSSIYKANITFGFFDKSVNKDYAFANLPQGQKMVYTWYNAKSH 163
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMS 164
I + HEIGH LGL HP Y+ P Y +Y D +VMS
Sbjct: 164 TFVDNDIDVNGYIRQTFTHEIGHTLGLEHPADYDASDEIRPNYINSAEYFEDCRAYTVMS 223
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK---------IEVQQK 214
YF + + D +GY + P+++DI A+Q++YGA + G+ +Y +
Sbjct: 224 YFSEKFTGQDFKYGYSSAPLLNDISAIQELYGANMETRKGDTVYGFNSNTDRDFMTATDA 283
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+S I +++D+GG+D D + G +N I+LN S+S +GG + N++IA+ VIE+ +G
Sbjct: 284 NSKLIFSVWDAGGEDTFDFS--GFTQNQRINLNAGSFSDVGGLKGNVSIARGVVIENAIG 341
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
SG+D+++GNSA+N+ +G+D+ G G D
Sbjct: 342 GSGDDILVGNSADNILKGGAGDDIIYGGLGGD 373
>gi|312960983|ref|ZP_07775488.1| serralysin [Pseudomonas fluorescens WH6]
gi|311284641|gb|EFQ63217.1| serralysin [Pseudomonas fluorescens WH6]
Length = 477
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 166/364 (45%), Gaps = 70/364 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S LN NAQ
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSATLNKHGISGFSQFNAQ 97
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
+ A+ A+ W+ V ++ F E + S +G++ Y S D A +
Sbjct: 98 QKAQAVLAMQSWADVANVAFTEKA--------SGGDGHMTFGNYSSGQ------DGAAAF 143
Query: 111 RYGIGKGT-------ILSHNA-----------------LHEIGHALGLMHPGSYNGG--Y 144
Y G G L++N+ HEIGH LGL HPG YN G
Sbjct: 144 AYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGA 203
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG 200
P Y D Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 204 PTYN-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYN 262
Query: 201 S-LGNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTES 249
+ G+ Y + + +++D GG+D LD + G +N I+LN S
Sbjct: 263 TRAGDTTYGFNSNTGRDFLSAGSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLNETS 320
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S +GG N++IA+ +E+ G +GND++IGN+A NV +GND+ G G D +
Sbjct: 321 FSDVGGLVGNVSIAKGVTVENAFGGAGNDLIIGNNAANVIKGGAGNDLIYGGGGADQLWG 380
Query: 310 YAPS 313
A S
Sbjct: 381 GAGS 384
>gi|60101756|gb|AAX13994.1| EprB [Erwinia chrysanthemi]
Length = 480
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 161/358 (44%), Gaps = 54/358 (15%)
Query: 3 NIKPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRL-SFDIT--------ELNPNA 51
N KP Y+T++ + L + W+ + K LT L +F T + P
Sbjct: 42 NGKPSYSTDKAVEEGLTRPHTTWNGDNVYGKAANLTYSFLNTFSSTPNGHTGPVKFTPVQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTPRY---- 94
+ + +L WS V +LTF E S + +N Y P
Sbjct: 102 MQQVKLSLQSWSDVANLTFTEVSPNQKANLTFANYTRNADGSIENDTQAYAAYPGQHPLS 161
Query: 95 DSRYFM--EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S +F + + D YG HEIGHALGL HP YN G N
Sbjct: 162 GSAWFNYNQPSIRNPDTEEYG-------RQTFTHEIGHALGLSHPAEYNAGEGDISYKNS 214
Query: 153 --YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI 209
Y DS S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+++Y
Sbjct: 215 AVYAEDSRQFSIMSYWDIENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDSVYGF 274
Query: 210 E---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEK 258
I +++D+GG+D D + G N I+LN S+S +GG +
Sbjct: 275 HSNTDRDFYTANDSSKALIFSVWDAGGNDTFDFS---GYSNNQRINLNEGSFSDVGGLKG 331
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N++IA IE+ +G SGND+++GN A+NV +G+DV GS+G DT A +++
Sbjct: 332 NVSIAHGVTIENAIGGSGNDLLVGNGADNVLQGGAGDDVLYGSTGADTLVGGAGRHIF 389
>gi|238755251|ref|ZP_04616595.1| Serralysin [Yersinia ruckeri ATCC 29473]
gi|14161134|emb|CAC39217.1| metalloprotease p1 [Yersinia ruckeri]
gi|238706485|gb|EEP98858.1| Serralysin [Yersinia ruckeri ATCC 29473]
Length = 477
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 159/346 (45%), Gaps = 53/346 (15%)
Query: 5 KPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRL-------SFD--ITELNPNAQEV 54
KP YT E + R +Q W+ + +P LT L S D + NP EV
Sbjct: 42 KPSYTPEEAGLQITRTNQTWNGKNVFDQPVKLTYSFLDQVSRIPSGDKGFVKFNPAQIEV 101
Query: 55 ARWALGEWSKVVDLTFEE--TSIHSDIKF---ISSNNGYVC------------TPRYDSR 97
A+ +L W+ ++ F E +S ++I F S NG +P +
Sbjct: 102 AKLSLQSWADAANIAFTEITSSQSANITFGNYTLSWNGKPADSQAYAYLPGSGSPSGSTW 161
Query: 98 YFMEI-NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYE 154
Y + N DV YG HEIGHALGL HPG+YN G P Y D Y
Sbjct: 162 YNYNVDNIRNPDVMEYG-------RQTFTHEIGHALGLSHPGNYNAGQGDPSY-KDVTYA 213
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ 213
D+ S+MSY+ +++ D Y + P++ DI A+Q +YGA + G+ IY
Sbjct: 214 EDTRQFSIMSYWSEKNTGGDNKGHYASAPLLDDISAIQHLYGANMTTRTGDTIYGFNSNT 273
Query: 214 K---------DSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTI 262
+ I +++D+ G+D D + G N I+L +S+S +GG + N++I
Sbjct: 274 ERDYYTAINSSKALIFSVWDADGNDTFDFS---GYSNNQRINLYEQSFSDVGGLKGNVSI 330
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
A IE+ +G SGNDV++GN N ++GNDV G G D +
Sbjct: 331 AAGVTIENAIGGSGNDVLVGNDIANELHGAAGNDVLFGCGGADKLW 376
>gi|62754183|gb|AAX99109.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 144/308 (46%), Gaps = 33/308 (10%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNN-IYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+Q +YGA K ++ +Y + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGANKTIRADDPVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFSGFT-QD 311
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G+D+ G
Sbjct: 312 QRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAGDDIIYG 371
Query: 301 SSGLDTFF 308
G D +
Sbjct: 372 GLGADNLW 379
>gi|60265600|gb|AAX15945.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894058|gb|ADP37932.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
Length = 478
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 156/332 (46%), Gaps = 38/332 (11%)
Query: 10 TERIADHLLRDQY-WSN-------------YFIRYKPDVLTTHRLSFDITELNPNAQEVA 55
+ D L+R Y W+N +F++ D L + N ++ A
Sbjct: 44 ADEAPDELVRGHYKWANKYVNSSGTLELSYHFLKSASDPLMRIFKVSGFSAFNEEQKDAA 103
Query: 56 RWALGEWSKVVDLTFEETS--IHSDIKF------ISSNNGYVCTPRYDSRYFMEINFDKA 107
+ +L WS V ++ F E S ++I F ++ + + P+ + N
Sbjct: 104 KLSLQSWSDVANIKFTEVSSIYKANITFGFFDKSVNKDYAFANLPQGQKMVYTWYNAKSH 163
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMS 164
I + HEIGH LGL HP Y+ P Y +Y D +VMS
Sbjct: 164 TFVDNDIDVNGYIRQTFTHEIGHTLGLEHPADYDASDEIRPNYINSAEYFEDCRAYTVMS 223
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK---------IEVQQK 214
YF + + D +GY + P+++DI A+Q++YGA + G+ +Y +
Sbjct: 224 YFSEKFTGQDFKYGYSSAPLLNDISAIQELYGANMETRKGDTVYGFNSNTDRDFMTATDA 283
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+S I +++D+GG+D D + G +N I+LN S+S +GG + N++IA+ VIE+ +G
Sbjct: 284 NSKLIFSVWDAGGEDTFDFS--GFTQNQRINLNAGSFSDVGGLKGNVSIARGVVIENAIG 341
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
SG+D+++GNSA+N+ G+D+ G G D
Sbjct: 342 GSGDDILVGNSADNILKGGVGDDIIYGGLGGD 373
>gi|307945601|ref|ZP_07660937.1| serralysin [Roseibium sp. TrichSKD4]
gi|307771474|gb|EFO30699.1| serralysin [Roseibium sp. TrichSKD4]
Length = 951
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 154/327 (47%), Gaps = 26/327 (7%)
Query: 18 LRDQYW-SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
L + YW SN +V ++++ L + +A AL W V L F+ TS
Sbjct: 581 LTNGYWESNGRTERSFNVAPGAVITYNHDGLASGVRHLATTALELWGDVTGLQFQYTSGS 640
Query: 77 SDIKFISSNNG-----YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ I F + +G Y+ S Y IN A YG + +HE+GHA
Sbjct: 641 AQITFDDNYSGAYAYSYLSGTTITSSY---INVSTAWTDYYGTALNSYSFQTYIHEVGHA 697
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVA 190
LGL H G+YNG + + NDS+ S+MSYF +++ +DAS+ TP ++D++A
Sbjct: 698 LGLGHAGNYNG-SASFDPNVHLANDSWQASLMSYFSQTENTNVDASWALAVTPQMADVLA 756
Query: 191 VQKIYGAP------------KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
V+ +YG S G+ + +S TI D GG D L+ +
Sbjct: 757 VRNLYGTTGTTRTDDTTYGDNASSGDTFASLTAM--NSSITYTIVDDGGIDTLNFSNTS- 813
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
IDLN E+ S++ G N+ IA+ TVIE+ + +GND +IGNSANN G D
Sbjct: 814 ANQLIDLNAEATSNVRGLTGNVIIARGTVIENAISGNGNDTLIGNSANNHLDGGLGADTL 873
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAI 325
G+ G DTF + A S + FEN I
Sbjct: 874 TGNYGYDTFVFAAGSGNDTVTDFENGI 900
>gi|271500588|ref|YP_003333613.1| Serralysin [Dickeya dadantii Ech586]
gi|270344143|gb|ACZ76908.1| Serralysin [Dickeya dadantii Ech586]
Length = 477
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 172/378 (45%), Gaps = 63/378 (16%)
Query: 5 KPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNP----------NAQE 53
KP YT E+ D + R W+ + KP LT L +++ N NA +
Sbjct: 41 KPSYTLEQARDQITRGNVTWNGDHVFGKPVALTYAFLQ-SVSDANMPDNYKGFVKFNAAQ 99
Query: 54 V--ARWALGEWSKVVDLTFEETS--IHSDIKFIS--------SNNGYVCTPRYDSRYFME 101
+ AR AL W+ V ++TF E + IKF + ++N Y +
Sbjct: 100 IQQARLALQSWADVANVTFTEVKNPQQATIKFGNYTLTSDGHTDNNSQAFGFYPGNWKWA 159
Query: 102 ----INFDKADVWRYGIGKGTILSHNAL-HEIGHALGLMHPGSYNG--GYPVYGVDNDYE 154
N+++AD R I + N L HEIGH LGL HPG Y+ G P Y D Y
Sbjct: 160 GSAWFNYNQADNQRPDINE---FGRNTLAHEIGHTLGLYHPGDYDASDGNPGY-KDVTYA 215
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE--- 210
D+ S+MSY+ + D + A P++ DI A+QK+YGA + G+ +Y
Sbjct: 216 EDTRQFSIMSYWNEGYTGGDFHGYHAAAPLMDDIAAIQKLYGANMTTRTGDTVYGFHSNA 275
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+P I +++D+GG+D D + + I L + ++S +GG + N++IA
Sbjct: 276 GRDFYTATDSKTPLIFSVWDAGGNDTFDFSGYSSNQR-ISLISGTFSDVGGLKGNVSIAA 334
Query: 265 HTVIESVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGSSGLDTFFYY----- 310
VIE+ +G SGNDV++GN + N+V + G D+ G +G D F Y
Sbjct: 335 GAVIENAIGGSGNDVIVGNLSDNRIDGGAGNDVLYGDGGADILTGGAGKDIFVYAWEKDS 394
Query: 311 ---APSYLYKIYRFENAI 325
AP + R E+ I
Sbjct: 395 LASAPDTITDFQRGEDKI 412
>gi|50236481|gb|AAT71322.1| metalloprotease [Pseudomonas fluorescens]
Length = 482
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 154/356 (43%), Gaps = 64/356 (17%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ A LLRD + + H +S ++ +
Sbjct: 45 NGKPSFSVDQAATQLLRDGAAYKDLNGNGKIDLTYTFLTSASSSTMYKHGIS-GFSQFSA 103
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
+ A A+ W+ V ++ F E + D N GY T
Sbjct: 104 QQKAQAVLAMQSWADVANVVFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 163
Query: 92 PRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVY 147
Y +S Y N D + R HEIGH LGL HPG YN G P Y
Sbjct: 164 SWYLINSSYTQNKNPDLNNYGR----------QTLTHEIGHTLGLAHPGDYNAGEGNPSY 213
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-L 202
D Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 214 -KDASYGQDTRGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANYSTRA 272
Query: 203 GNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSS 252
G+ Y + +++D GG+D LD + G +N I+LN S+S
Sbjct: 273 GDTTYGFNSNTGRDFYSASSSSDKLVFSVWDGGGNDTLDFS--GFTQNQKINLNEASFSD 330
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+GG N++IAQ +E+ +G SGND++IGN+A NV +GND+ G+ G D +
Sbjct: 331 VGGMVGNVSIAQGVTVENAIGGSGNDLLIGNNAANVLKGGAGNDIIFGAGGADQLW 386
>gi|70730574|ref|YP_260315.1| protease PrtA [Pseudomonas fluorescens Pf-5]
gi|68344873|gb|AAY92479.1| protease PrtA [Pseudomonas fluorescens Pf-5]
Length = 482
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 154/356 (43%), Gaps = 64/356 (17%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ A LLRD + + H +S ++ +
Sbjct: 45 NGKPSFSVDQAATQLLRDGAAYKDLNGNGKIDLTYTFLTSASSSTMYKHGIS-GFSQFSA 103
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
+ A A+ W+ V ++ F E + D N GY T
Sbjct: 104 QQKAQAVLAMQSWADVANVVFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 163
Query: 92 PRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVY 147
Y +S Y N D + R HEIGH LGL HPG YN G P Y
Sbjct: 164 SWYLINSSYTQNKNPDLNNYGR----------QTLTHEIGHTLGLAHPGDYNAGEGNPSY 213
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-L 202
D Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 214 -KDASYGQDTRGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANYSTRA 272
Query: 203 GNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSS 252
G+ Y + +++D GG+D LD + G +N I+LN S+S
Sbjct: 273 GDTTYGFNSNTGRDFYSASSSSDKLVFSVWDGGGNDTLDFS--GFTQNQKINLNEASFSD 330
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+GG N++IAQ +E+ +G SGND++IGN+A NV +GND+ G+ G D +
Sbjct: 331 VGGMVGNVSIAQGVTVENAIGGSGNDLLIGNNAANVLKGGAGNDIIYGAGGADQLW 386
>gi|62754175|gb|AAX99105.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 143/308 (46%), Gaps = 33/308 (10%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGA--------PKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+Q +YGA P +N + + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGANNTIRADDPVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFSGFT-QD 311
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G+D+ G
Sbjct: 312 QRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAGDDIIYG 371
Query: 301 SSGLDTFF 308
G D +
Sbjct: 372 GLGADNLW 379
>gi|62754181|gb|AAX99108.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKSSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDLT 234
+Q +YGA NN + + + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGA------NNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFS 306
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G
Sbjct: 307 GFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAG 365
Query: 295 NDVFDGSSGLDTFF 308
+D+ G G D +
Sbjct: 366 DDIIYGGLGADNLW 379
>gi|77459585|ref|YP_349092.1| epralysin. metallo peptidase. MEROPS family M10B [Pseudomonas
fluorescens Pf0-1]
gi|77383588|gb|ABA75101.1| putative metalloprotease [Pseudomonas fluorescens Pf0-1]
Length = 468
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 158/362 (43%), Gaps = 62/362 (17%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN-----------YFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ AD +LR W + F+ KP +F +E +
Sbjct: 30 NGKPSFTADQAADEILRKGMSWQDKNADGKIDLTYTFLTDKPSNYNAKLGNF--SEFSAQ 87
Query: 51 AQEVARWALGEWSKVVDLTFEETS------IHSDIKFISSNNGYVCTPR---YDSRYFME 101
+ A ++ WS V +TF E + + + P+ YD + +
Sbjct: 88 QKAQAVLSMQSWSDVAKVTFTEGKGGDGHMTFGNYDVSTGGAAFAYLPQGSSYDGQSWYL 147
Query: 102 IN-----FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYE 154
IN D YG HEIGH LGL HPG+YN G P YG D Y
Sbjct: 148 INDQYQVNKTPDANNYG-------RQTLTHEIGHTLGLSHPGAYNAGNGNPTYG-DAKYA 199
Query: 155 NDSFLTSVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ S+MSY+ Q+ D S Y + P++ DIVAVQK+YGA + N +Y
Sbjct: 200 EDTRGYSLMSYWSEANTDQNFSKDGSGAYASAPLMDDIVAVQKLYGANFETRADNTVYGF 259
Query: 210 ---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
S + +++D GG+D LD + I+LN S+S +GG N+
Sbjct: 260 NSNADRDFYSATSNTSKVVFSVWDGGGNDTLDFSGFN-QNQKINLNEGSFSDVGGLVGNV 318
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYA 311
+IA +E+ +G SG+D++IGN+A N +GND+ G G DTF + A
Sbjct: 319 SIAHGVTVENAIGGSGSDLLIGNAAANDLIGGAGNDIIYGGGGGDSLWGGEGADTFVFGA 378
Query: 312 PS 313
S
Sbjct: 379 AS 380
>gi|3493596|gb|AAC33449.1| ZapA [Proteus mirabilis]
Length = 491
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 54/353 (15%)
Query: 4 IKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDIT----------ELNPNAQ 52
+ P + + H+ R D W+ ++ +P +T ++ E N +
Sbjct: 32 VLPSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQK 91
Query: 53 EVARWALGEWSKVVDLTFEETSI-----------HSDIKF--ISSNNG----YVCTPRY- 94
E AR +L WS + ++ F E ++ +DI F I NG Y P
Sbjct: 92 EHARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTY 151
Query: 95 -------DSRYFMEINFDKADVWRYG-IGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+F + ++ G G+ TI+ HEIGH LGLMHPG YN G V
Sbjct: 152 AYGKDLSGQAWFSDYHYAGNTTPELGNYGRLTII-----HEIGHTLGLMHPGDYNAGQNV 206
Query: 147 YG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGN 204
G + +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+
Sbjct: 207 PGYLKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGD 266
Query: 205 NIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
++Y + I +++DSGG+D D + IDL ++S +GG
Sbjct: 267 DVYGFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFH-QDQLIDLRAGNFSDVGG 325
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+KN++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 326 LQKNVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY 378
>gi|62754169|gb|AAX99102.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 33/308 (10%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNN-IYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+Q +YGA ++ +Y + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGAKNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFSGFT-QD 311
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G+D+ G
Sbjct: 312 QRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAGDDIIYG 371
Query: 301 SSGLDTFF 308
G D +
Sbjct: 372 GLGADNLW 379
>gi|290473566|ref|YP_003466436.1| Secreted alkaline metalloproteinase [Xenorhabdus bovienii SS-2004]
gi|289172869|emb|CBJ79640.1| Secreted alkaline metalloproteinase [Xenorhabdus bovienii SS-2004]
Length = 476
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 201/441 (45%), Gaps = 84/441 (19%)
Query: 12 RIADHLLRDQY-WSN------------YFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
+ D L+R Y W+N +F+ P V+ ++ + N +E A +
Sbjct: 46 KAPDELVRTNYHWTNKVGSSGAVELSYHFLESAPSVMPRFGIA-GFSSFNDEQKEAALLS 104
Query: 59 LGEWSKVVDLTFEETSIHS--DIKF------ISSNNGYVCTPR----------YDSRYFM 100
L WS V ++ F E S S +I F I+ + + P+ +SR F+
Sbjct: 105 LQSWSDVANVKFNEVSSLSKANITFGFFDYSITDDYAFATLPKGQNTTYSWYSAESRTFI 164
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDS 157
+ D+ G G+ T HEIGH LGL HP Y+ P Y +Y DS
Sbjct: 165 D-----NDIGVNGYGRQTFT-----HEIGHTLGLDHPAEYDASDAVRPTYISVGEYFEDS 214
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYK-------- 208
+VMSYF + + D + + P+++DI A+Q++YGA + G+ +Y
Sbjct: 215 RAYTVMSYFSEKYTGQDYKGAFSSAPLLNDISAIQQLYGANTETRTGDTVYGFNSNTDRD 274
Query: 209 -IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHT 266
+ S + +++D+ G+D D + G +N I+LN ++S +GG + N++IA+
Sbjct: 275 FMTATNAKSKLVFSVWDADGNDTFDFS--GFTQNQRINLNEGAFSDVGGLKGNVSIARGV 332
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYY------- 310
IE+ +G SG+D+++GNSA+NV G+D+ G +G DTF Y
Sbjct: 333 TIENAIGGSGDDILVGNSADNVLKGGDGDDIIYGGLGGDDLWGGAGKDTFVYLNGKESLK 392
Query: 311 -APSYLYKIYRFENAIIVYDANEHKQDFLSDV--------ERLRFADQCIDSVNVKQRSI 361
P +++ E+ I + D N + + V E L D+ D ++ S+
Sbjct: 393 GNPDWIHDFISGEDKIDLSDFNFGGKGDIKFVDSFSGRAGEVLLTYDKVTDITDM-SISL 451
Query: 362 LEYTASYEDLIQVIGQDVFES 382
AS++ L+++IGQ V E+
Sbjct: 452 GGDLASHDFLVKIIGQPVAEA 472
>gi|62754177|gb|AAX99106.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDLT 234
+Q +YGA NN + + + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGA------NNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFS 306
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G
Sbjct: 307 GFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAG 365
Query: 295 NDVFDGSSGLDTFF 308
+D+ G G D +
Sbjct: 366 DDIIYGGLGADNLW 379
>gi|152986695|ref|YP_001349497.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PA7]
gi|150961853|gb|ABR83878.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PA7]
Length = 479
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 168/365 (46%), Gaps = 61/365 (16%)
Query: 1 MHNIKPVYTTERIADHLLRDQY-WS----------NYFIRYKPDVLTTHRLSF--DITEL 47
+ N P YT ++ AD +LR+ W +Y KP+ + DI L
Sbjct: 32 LVNGHPSYTVDQAADQILRENAAWQKAPGDSVLTLSYSFLTKPNDFFNSPWKYVSDIYSL 91
Query: 48 NP----NAQEVA--RWALGEWSKVVDLTFEETSI--HSDIKF--ISSNNG---YVCTP-- 92
+AQ+ A + +L WS V + F + D+ F SS+ G + P
Sbjct: 92 GKFSAFSAQQQAQTKLSLQSWSDVAKINFVDAGQGEQGDLVFGNFSSSVGGAAFAFLPDV 151
Query: 93 ----RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PV 146
+ S Y + ++ A+V G HEIGH LGL HPG YN G P
Sbjct: 152 QDALKGQSWYLINSSY-SANV---NPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPT 207
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D Y D+ SVMSY+ Q++ D Y + P++ DI A+Q++YGA + G+
Sbjct: 208 Y-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQQLYGANLTTRTGDT 266
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
+Y S + +++D+GG+D LD + G +N I+LN ++ S +GG
Sbjct: 267 VYGFNSNTERDFYSATSSTSKLVFSVWDAGGNDTLDFS--GFSQNQKINLNEKALSDVGG 324
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDT 306
+ N++IA +E+ +G SG+D+++GN NV +GND+ G SG DT
Sbjct: 325 LKGNVSIAAGATVENAIGGSGSDLLVGNQVANVLKGGAGNDILYGGLGADQLWGGSGADT 384
Query: 307 FFYYA 311
F Y A
Sbjct: 385 FVYGA 389
>gi|62754171|gb|AAX99103.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDLT 234
+Q +YGA NN + + + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGA------NNTIRADDPVYGFNSNPDRDFYTAKDENSKLLFTAWDTGGNDTFDFS 306
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G
Sbjct: 307 GFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAG 365
Query: 295 NDVFDGSSGLDTFF 308
+D+ G G D +
Sbjct: 366 DDIIYGGLGADNLW 379
>gi|330809663|ref|YP_004354125.1| Alkaline metalloproteinase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377771|gb|AEA69121.1| Alkaline metalloproteinase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 485
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 161/370 (43%), Gaps = 73/370 (19%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP Y+ + A LLRD + + + H +S ++ +
Sbjct: 48 NGKPSYSVDEAATQLLRDGAAYQDRDGSGKIELTYTFLTSASSSTMNKHGIS-GFSQFSA 106
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
+ A A+ W+ V ++TF E + D N GY T
Sbjct: 107 QQKGQAALAMQSWADVANVTFAEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 166
Query: 92 PRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVY 147
Y +S Y N D + R HEIGH LGL HPG YN G P Y
Sbjct: 167 SWYLINSSYTQNKNPDLNNYGR----------QTLTHEIGHTLGLAHPGDYNAGEGSPTY 216
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-L 202
D Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 217 -DDATYGQDTRGYSVMSYWSESNTDQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRT 275
Query: 203 GNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSS 252
G++ Y + + +++D+GG D LD + G +N I+LN S+S
Sbjct: 276 GDSTYGFNSNTGRDFLSASSSSDKVVFSVWDAGGRDTLDFS--GFTQNQKINLNDASFSD 333
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---------SG 303
+GG N++IA+ VIE+ +G +G+D++IGNS N +GND+ G+ SG
Sbjct: 334 VGGMVGNVSIAKGAVIENAIGGAGSDLLIGNSVANELKGGAGNDILWGAGGADKLWGGSG 393
Query: 304 LDTFFYYAPS 313
DTF + A S
Sbjct: 394 SDTFVFAASS 403
>gi|62754167|gb|AAX99101.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
gi|62754173|gb|AAX99104.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
gi|62754187|gb|AAX99111.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDLT 234
+Q +YGA NN + + + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGA------NNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFS 306
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G
Sbjct: 307 GFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAG 365
Query: 295 NDVFDGSSGLDTFF 308
+D+ G G D +
Sbjct: 366 DDIIYGGLGADNLW 379
>gi|9438187|gb|AAF87588.1|AF286062_1 AprA [Pseudomonas brassicacearum]
Length = 487
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 161/370 (43%), Gaps = 73/370 (19%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP Y+ + A LLRD + + + H +S ++ +
Sbjct: 50 NGKPSYSVDEAATQLLRDGAAYQDRDGSGKIELTYTFLTSASSSTMNKHGIS-GFSQFSA 108
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
+ A A+ W+ V ++TF E + D N GY T
Sbjct: 109 QQKGQAALAMQSWADVANVTFAEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 168
Query: 92 PRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVY 147
Y +S Y N D + R HEIGH LGL HPG YN G P Y
Sbjct: 169 SWYLINSSYTQNKNPDLNNYGR----------QTLTHEIGHTLGLAHPGDYNAGEGSPTY 218
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-L 202
D Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 219 -DDATYGQDTRGYSVMSYWSESNTDQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRT 277
Query: 203 GNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSS 252
G++ Y + + +++D+GG D LD + G +N I+LN S+S
Sbjct: 278 GDSTYGFNSNTGRDFLSASSSSDKVVFSVWDAGGRDTLDFS--GFTQNQKINLNDASFSD 335
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---------SG 303
+GG N++IA+ VIE+ +G +G+D++IGNS N +GND+ G+ SG
Sbjct: 336 VGGMVGNVSIAKGAVIENAIGGAGSDLLIGNSVANELKGGAGNDILWGAGGADKLWGGSG 395
Query: 304 LDTFFYYAPS 313
DTF + A S
Sbjct: 396 SDTFVFAASS 405
>gi|197284187|ref|YP_002150059.1| metalloprotease [Proteus mirabilis HI4320]
gi|227357937|ref|ZP_03842280.1| serralysin [Proteus mirabilis ATCC 29906]
gi|194681674|emb|CAR40753.1| metalloprotease [Proteus mirabilis HI4320]
gi|227161846|gb|EEI46875.1| serralysin [Proteus mirabilis ATCC 29906]
Length = 491
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 54/353 (15%)
Query: 4 IKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDIT----------ELNPNAQ 52
+ P + + H+ R D W+ ++ +P +T ++ E N +
Sbjct: 32 VLPSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQK 91
Query: 53 EVARWALGEWSKVVDLTFEETSI-----------HSDIKF--ISSNNG----YVCTPRY- 94
E AR +L WS + ++ F E ++ +DI F I NG Y P
Sbjct: 92 EHARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTY 151
Query: 95 -------DSRYFMEINFDKADVWRYG-IGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+F + ++ G G+ TI+ HEIGH LGLMHPG YN G V
Sbjct: 152 AYGKDLSGQAWFSDYHYAGNTTPELGNYGRLTII-----HEIGHTLGLMHPGDYNAGQNV 206
Query: 147 YG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGN 204
G + +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+
Sbjct: 207 PGYLKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGD 266
Query: 205 NIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
++Y + I +++DSGG+D D + IDL ++S +GG
Sbjct: 267 DVYGFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFY-QDQLIDLRAGNFSDVGG 325
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+KN++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 326 LQKNVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY 378
>gi|62754189|gb|AAX99112.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 144/314 (45%), Gaps = 45/314 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDLT 234
+Q +YGA NN + + + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGA------NNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFS 306
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G
Sbjct: 307 GFTQDQR-INLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAG 365
Query: 295 NDVFDGSSGLDTFF 308
+D+ G G D +
Sbjct: 366 DDIIYGGLGADNLW 379
>gi|37524656|ref|NP_928000.1| alkaline metalloprotease precursor PrtA [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|54038902|sp|Q7N8R3|PRTA_PHOLL RecName: Full=Secreted alkaline metalloproteinase
gi|36784081|emb|CAE12950.1| Alkaline metalloprotease precursor PrtA [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 480
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 75 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 129
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 130 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 188
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 189 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 248
Query: 191 VQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDLT 234
+Q +YGA NN + + + ++S + T +D+GG+D D +
Sbjct: 249 IQAVYGA------NNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFS 302
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G
Sbjct: 303 GFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAG 361
Query: 295 NDVFDGSSGLDTFF 308
+D+ G G D +
Sbjct: 362 DDIIYGGLGADNLW 375
>gi|270261821|ref|ZP_06190093.1| serralysin [Serratia odorifera 4Rx13]
gi|270043697|gb|EFA16789.1| serralysin [Serratia odorifera 4Rx13]
Length = 490
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 190/458 (41%), Gaps = 90/458 (19%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDITELNPNA---------- 51
N KP + + R +Q W+ I + +T +D + N N+
Sbjct: 31 NNKPSFDVGEAGQQIARSEQTWNGVHITGQGATVTYSFPDWDYNQTNLNSVFFRADDRET 90
Query: 52 ---------QEVARWALGEWSKVVDLTFEETSI--HSDIKFIS---SNNGYVCTP----- 92
Q A+ +L W+ V ++TF E + SDI F + + Y P
Sbjct: 91 GLSAFTAEQQAQAKLSLQSWADVANITFVEVAPGHKSDITFGNYEGAGQAYAIKPFTQAG 150
Query: 93 ------RYDSRYFMEINFDKADVWRYGIGKGTILS-HNAL---------HEIGHALGLMH 136
+ + +N+D AD G G + H L HEIGH LGL H
Sbjct: 151 NDYSGQHVAGQSWYNVNYDVADT-----GDGVYANLHPDLGNYGRLTFTHEIGHTLGLDH 205
Query: 137 PGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
PG YN G Y Y D+ SVMSY+ + D Y A P+V DI A+Q +Y
Sbjct: 206 PGDYNAGDGATYKSVPTYAEDTRQFSVMSYWNESYTGGDNGGHYAAAPLVDDIAAIQYLY 265
Query: 196 GAPKGS-LGNNIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
GA + G+++Y + +++D GG D LD + I+L
Sbjct: 266 GANTSTRAGDSVYGFHSNTGRDFYTANDSSQKLVFSVWDGGGKDTLDFSGYS-QDQRINL 324
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-------- 297
S+S +GG + N++IA IE+ +G SGNDV++GN+A N+ +GNDV
Sbjct: 325 TAGSFSDVGGLKGNISIAAGVTIENAIGGSGNDVIVGNNAANIIKGGAGNDVIYGGGGQD 384
Query: 298 -FDGSSGLDTFFYYAPS---YLY--KIYRFENAI-----IVYDANEHKQDFLSDVERLRF 346
G SG D F + A S Y KI FE I ++ + DF+ VE L
Sbjct: 385 QLSGGSGKDIFVFAAVSDSPYTSPDKILDFETGIDKIDLSFFNHGDKGNDFIHFVENLSG 444
Query: 347 -ADQCIDSVNVKQRSILEYT------ASYEDLIQVIGQ 377
A + + S N Q + E A + L+Q++GQ
Sbjct: 445 QAGEALLSYNA-QTHLSELALNIHGNAGPDFLVQIVGQ 481
>gi|62754185|gb|AAX99110.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNIPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDLT 234
+Q +YGA NN + + + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGA------NNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFS 306
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
I+LN S+S +GG + N++IA+ IE+ +G SGNDV+IGN A N +G
Sbjct: 307 GFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAG 365
Query: 295 NDVFDGSSGLDTFF 308
+D+ G G D +
Sbjct: 366 DDIIYGGLGADNLW 379
>gi|829594|gb|AAA86729.1| metalloprotease [Proteus mirabilis]
Length = 495
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 54/353 (15%)
Query: 4 IKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDIT----------ELNPNAQ 52
+ P + + H+ R D W+ ++ +P +T ++ E N +
Sbjct: 36 VLPSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQK 95
Query: 53 EVARWALGEWSKVVDLTFEETSI-----------HSDIKF--ISSNNG----YVCTPRY- 94
E AR +L WS + ++ F E ++ +DI F I NG Y P
Sbjct: 96 EHARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTY 155
Query: 95 -------DSRYFMEINFDKADVWRYG-IGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+F + ++ G G+ TI+ HEIGH LGLMHPG YN G V
Sbjct: 156 AYGKDLSGQAWFSDYHYAGNTTPELGNYGRLTII-----HEIGHTLGLMHPGDYNAGQNV 210
Query: 147 YG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGN 204
G + +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+
Sbjct: 211 PGYLKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGD 270
Query: 205 NIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
++Y + I +++DSGG+D D + IDL ++S +GG
Sbjct: 271 DVYGFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFY-QDQLIDLRAGNFSDVGG 329
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+KN++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 330 LQKNVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY 382
>gi|77458903|ref|YP_348409.1| epralysin. metallo peptidase. MEROPS family M10B [Pseudomonas
fluorescens Pf0-1]
gi|77382906|gb|ABA74419.1| metalloprotease [Pseudomonas fluorescens Pf0-1]
Length = 486
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 157/361 (43%), Gaps = 64/361 (17%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ A LLRD + + + H +S ++ +
Sbjct: 49 NGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMYKHGIS-GFSQFST 107
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
+ A A+ W+ V ++TF E + D N GY T
Sbjct: 108 QQKAQAVLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 167
Query: 92 PRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVY 147
Y +S Y N D + R HEIGH LGL HPG YN G P Y
Sbjct: 168 SWYLINSGYTQNKNPDLNNYGR----------QTLTHEIGHTLGLAHPGDYNAGNGNPTY 217
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-L 202
D Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 218 N-DATYGQDTRGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANLTTRT 276
Query: 203 GNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSS 252
G+ Y + + +++D+GG D D + G +N I+LN S+S
Sbjct: 277 GDTTYGFNSNAGRDFLSASSSADKLVFSVWDAGGKDTFDFS--GFTQNQKINLNEASFSD 334
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG N++IA+ IE+ +G SGND++IGNSA N +GND+ G+ G D + A
Sbjct: 335 VGGLVGNVSIAKGVTIENAIGGSGNDLLIGNSAANELKGGAGNDIIWGAGGADKLWGGAG 394
Query: 313 S 313
S
Sbjct: 395 S 395
>gi|1731424|sp|Q11137|ZAPA_PROMI RecName: Full=Extracellular metalloprotease; Flags: Precursor
Length = 491
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 54/353 (15%)
Query: 4 IKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDIT----------ELNPNAQ 52
+ P + + H+ R D W+ ++ +P +T ++ E N +
Sbjct: 32 VLPSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQK 91
Query: 53 EVARWALGEWSKVVDLTFEETSI-----------HSDIKF--ISSNNG----YVCTPRY- 94
E AR +L WS + ++ F E ++ +DI F I NG Y P
Sbjct: 92 EHARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTY 151
Query: 95 -------DSRYFMEINFDKADVWRYG-IGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+F + ++ G G+ TI+ HEIGH LGLMHPG YN G V
Sbjct: 152 AYGKDLSGQAWFSDYHYAGNTTPELGNYGRLTII-----HEIGHTLGLMHPGDYNAGQNV 206
Query: 147 YG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGN 204
G + +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+
Sbjct: 207 PGYLKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGD 266
Query: 205 NIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
++Y + I +++DSGG+D D + IDL ++S +GG
Sbjct: 267 DVYGFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFY-QDQLIDLRAGNFSDVGG 325
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+KN++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 326 LQKNVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY 378
>gi|730410|sp|Q07295|PRTA_ERWCH RecName: Full=Secreted protease A; Short=ProA; Flags: Precursor
gi|297898|emb|CAA49611.1| protease A [Erwinia chrysanthemi]
Length = 472
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 157/355 (44%), Gaps = 52/355 (14%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSF-------DITELNPNAQEV 54
N KP Y+ E D + RD W+ + K LT L D + NA +V
Sbjct: 41 NGKPSYSIEDAGDQITRDNVSWNGSNVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQV 100
Query: 55 A--RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS-----RYFMEINFDKA 107
A + AL W+ + ++TF E + + N + R D Y
Sbjct: 101 AQAKLALQSWADLANITFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSASG 160
Query: 108 DVWRYGIGKGTILSHNAL--------HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
W Y I S + + HEIGHALGL HPG YN G + Y D+
Sbjct: 161 TTW-YNYNVDNIRSPDKMEYGRQTLTHEIGHALGLNHPGDYNAGEG----NPTYREDTRQ 215
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-------- 210
S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+ +Y
Sbjct: 216 FSIMSYWSEKNTGGDFKGHYAAGPMLDDIDAIQRLYGANMTTRTGDTVYGFNSNTDRDFY 275
Query: 211 -VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTV 267
I +++D+GG D + G N I+LN S S +GG + N++IA
Sbjct: 276 TATSSSKALIFSVWDAGGKHTFDFS---GYSNNQRINLNEGSLSDVGGLKGNVSIAHGVT 332
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPS 313
IE+ +G SGND++IGN+A+N+ +G+D+ G SG DTF Y A S
Sbjct: 333 IENAIGGSGNDLLIGNNADNILRGGAGDDILYGGGGADRLYGGSGRDTFVYTAVS 387
>gi|17978658|gb|AAL47190.1| S-layer editing metalloprotease SapA [Caulobacter vibrioides]
Length = 658
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 181/439 (41%), Gaps = 68/439 (15%)
Query: 5 KPVYTTERIADHLLRDQY-WSNYF-----IRYKPDVLTTHRLSFDITELNP-NAQEV--A 55
K T A LLR + WSN F + Y + D + NA ++ A
Sbjct: 43 KKSLTVPEAALQLLRSEPGWSNQFLVPATVTYAFRATAPASMPSDTGGFSQFNAAQILQA 102
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFD---------- 105
AL WS V ++TF + + S+N + + + F
Sbjct: 103 EKALQAWSDVANITFVRVGQGTSGEAAYSDNASILFANFSTGSEGSAGFAYYPGNPAASS 162
Query: 106 -KADVW--------------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VY 147
DVW YG G +L +HE+GHA+G+ HP YN Y
Sbjct: 163 RSGDVWIKSTAGYNTNPTGSNYG---GMVL----VHELGHAIGIAHPSEYNASADDTLTY 215
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG--YCATPMVSDIVAVQKIYGAPKGS-LGN 204
V+ Y DS +VMSYF ++ SFG Y ++P++ DI A Q YGA + G+
Sbjct: 216 AVNATYYQDSRQYTVMSYF--SEANTGGSFGGAYASSPLLDDIAAAQLAYGANMTTRTGD 273
Query: 205 NIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+Y F T ++D+GG D LD + V IDL +SS+GG
Sbjct: 274 TVYGFNSTAGREWFAATSSSTRLVFAVWDAGGVDTLDFSGYR-VAQTIDLRAGYFSSVGG 332
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N+TIA + VIE+ +G S D + GN+ +N +G D+ DG G+DT +
Sbjct: 333 LKGNVTIAMNAVIENAIGGSAADTINGNAVDNRLTGGAGADILDGGRGVDTAVFSGAYGN 392
Query: 316 YKIYRFENAI--IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-------YTA 366
Y + N ++ D L+++E L F D+ + V+ + + + ++A
Sbjct: 393 YTLTAATNGAWSVLDRVGTDATDTLANIEFLAFTDRTVTLVDSRVATAISNILRLQTFSA 452
Query: 367 SYEDLIQVIGQDVFESMKH 385
S E L + + + H
Sbjct: 453 SAEPLSKSLAASMAAGASH 471
>gi|15596446|ref|NP_249940.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAO1]
gi|254234376|ref|ZP_04927699.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa C3719]
gi|254239625|ref|ZP_04932947.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 2192]
gi|416632|sp|Q03023|APRA_PSEAE RecName: Full=Alkaline metalloproteinase; Short=AP; Flags:
Precursor
gi|1311334|pdb|1KAP|P Chain P, Three-Dimensional Structure Of The Alkaline Protease Of
Pseudomonas Aeruginosa: A Two-Domain Protein With A
Calcium Binding Parallel Beta Roll Motif
gi|9947180|gb|AAG04638.1|AE004554_6 alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAO1]
gi|45283|emb|CAA45858.1| alkaline protease [Pseudomonas aeruginosa PAO1]
gi|126166307|gb|EAZ51818.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa C3719]
gi|126193003|gb|EAZ57066.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 2192]
Length = 479
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 164/353 (46%), Gaps = 52/353 (14%)
Query: 1 MHNIKPVYTTERIADHLLRDQY-WS----------NYFIRYKPDVL--TTHRLSFDITEL 47
+ N P YT ++ A+ +LR+Q W +Y KP+ T + DI L
Sbjct: 32 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 91
Query: 48 NP------NAQEVARWALGEWSKVVDLTFEETSI--HSDIKF--ISSNNG---YVCTP-- 92
Q A+ +L WS V ++ F + D+ F SS+ G + P
Sbjct: 92 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 151
Query: 93 ----RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PV 146
+ S Y + ++ A+V G HEIGH LGL HPG YN G P
Sbjct: 152 PDALKGQSWYLINSSY-SANV---NPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPT 207
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA + G+
Sbjct: 208 Y-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDT 266
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
+Y S + +++D+GG+D LD + G +N I+LN ++ S +GG
Sbjct: 267 VYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFS--GFSQNQKINLNEKALSDVGG 324
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N++IA +E+ +G SG+D++IGN NV +GND+ G G D +
Sbjct: 325 LKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLW 377
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 25/206 (12%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ Q++ D Y + P
Sbjct: 185 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAP 243
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
++ DI A+QK+YGA + G+ +Y S + +++D+GG+D LD
Sbjct: 244 LLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDF 303
Query: 234 TLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G +N I+LN ++ S +GG + N++IA +E+ +G SG+D++IGN NV
Sbjct: 304 S--GFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGG 361
Query: 293 SGNDVF---------DGSSGLDTFFY 309
+GND+ G +G DTF Y
Sbjct: 362 AGNDILYGGLGADQLWGGAGADTFVY 387
>gi|218892777|ref|YP_002441646.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
LESB58]
gi|62467844|gb|AAX84042.1| alkaline protease [Pseudomonas aeruginosa]
gi|218773005|emb|CAW28817.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
LESB58]
Length = 479
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 25/206 (12%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ Q++ D Y + P
Sbjct: 185 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAP 243
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
++ DI A+QK+YGA + G+ +Y S + +++D+GG+D LD
Sbjct: 244 LLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDF 303
Query: 234 TLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G +N I+LN ++ S +GG + N++IA +E+ +G SG+D++IGN NV
Sbjct: 304 S--GFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGG 361
Query: 293 SGNDVF---------DGSSGLDTFFY 309
+GND+ G +G DTF Y
Sbjct: 362 AGNDILYGGLGADQLWGGAGADTFVY 387
>gi|34559722|gb|AAQ75527.1| organic solvent-tolerant protease [Pseudomonas aeruginosa]
Length = 479
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 164/353 (46%), Gaps = 52/353 (14%)
Query: 1 MHNIKPVYTTERIADHLLRDQY-WS----------NYFIRYKPDVL--TTHRLSFDITEL 47
+ N P YT ++ A+ +LR+Q W +Y KP+ T + DI L
Sbjct: 32 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 91
Query: 48 NP------NAQEVARWALGEWSKVVDLTFEETSI--HSDIKF--ISSNNG---YVCTP-- 92
Q A+ +L WS V ++ F + D+ F SS+ G + P
Sbjct: 92 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 151
Query: 93 ----RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PV 146
+ S Y + ++ A+V G HEIGH LGL HPG YN G P
Sbjct: 152 PDALKGQSWYLINSSY-SANV---NPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPT 207
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA + G+
Sbjct: 208 Y-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDT 266
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
+Y S + +++D+GG+D LD + G +N I+LN ++ S +GG
Sbjct: 267 VYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFS--GFSQNQKINLNEKALSDVGG 324
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N++IA +E+ +G SG+D++IGN NV +GND+ G G D +
Sbjct: 325 LKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLW 377
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 25/206 (12%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ Q++ D Y + P
Sbjct: 185 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAP 243
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
++ DI A+QK+YGA + G+ +Y S + +++D+GG+D LD
Sbjct: 244 LLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDF 303
Query: 234 TLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G +N I+LN ++ S +GG + N++IA +E+ +G SG+D++IGN NV
Sbjct: 304 S--GFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGG 361
Query: 293 SGNDVF---------DGSSGLDTFFY 309
+GND+ G +G DTF Y
Sbjct: 362 AGNDILYGGLGADQLWGGAGTDTFVY 387
>gi|116049201|ref|YP_791996.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|313106233|ref|ZP_07792483.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 39016]
gi|115584422|gb|ABJ10437.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310878985|gb|EFQ37579.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 39016]
Length = 479
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 25/206 (12%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ Q++ D Y + P
Sbjct: 185 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAP 243
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
++ DI A+QK+YGA + G+ +Y S + +++D+GG+D LD
Sbjct: 244 LLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDF 303
Query: 234 TLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G +N I+LN ++ S +GG + N++IA +E+ +G SG+D++IGN NV
Sbjct: 304 S--GFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGG 361
Query: 293 SGNDVF---------DGSSGLDTFFY 309
+GND+ G +G DTF Y
Sbjct: 362 AGNDILYGGLGADQLWGGAGADTFVY 387
>gi|15825671|pdb|1JIW|P Chain P, Crystal Structure Of The Apr-Aprin Complex
gi|157829926|pdb|1AKL|A Chain A, Alkaline Protease From Pseudomonas Aeruginosa Ifo3080
Length = 470
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 164/353 (46%), Gaps = 52/353 (14%)
Query: 1 MHNIKPVYTTERIADHLLRDQY-WS----------NYFIRYKPDVL--TTHRLSFDITEL 47
+ N P YT ++ A+ +LR+Q W +Y KP+ T + DI L
Sbjct: 23 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 82
Query: 48 NP------NAQEVARWALGEWSKVVDLTFEETSI--HSDIKF--ISSNNG---YVCTP-- 92
Q A+ +L WS V ++ F + D+ F SS+ G + P
Sbjct: 83 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 142
Query: 93 ----RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PV 146
+ S Y + ++ A+V G HEIGH LGL HPG YN G P
Sbjct: 143 PDALKGQSWYLINSSY-SANV---NPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPT 198
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA + G+
Sbjct: 199 Y-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDT 257
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
+Y S + +++D+GG+D LD + G +N I+LN ++ S +GG
Sbjct: 258 VYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFS--GFSQNQKINLNEKALSDVGG 315
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N++IA +E+ +G SG+D++IGN NV +GND+ G G D +
Sbjct: 316 LKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLW 368
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 25/206 (12%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ Q++ D Y + P
Sbjct: 176 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAP 234
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
++ DI A+QK+YGA + G+ +Y S + +++D+GG+D LD
Sbjct: 235 LLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDF 294
Query: 234 TLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G +N I+LN ++ S +GG + N++IA +E+ +G SG+D++IGN NV
Sbjct: 295 S--GFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGG 352
Query: 293 SGNDVF---------DGSSGLDTFFY 309
+GND+ G +G DTF Y
Sbjct: 353 AGNDILYGGLGADQLWGGAGADTFVY 378
>gi|299818421|gb|ADJ53339.1| metalloprotease zapA [Proteus mirabilis]
Length = 491
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 163/356 (45%), Gaps = 60/356 (16%)
Query: 4 IKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDIT----------ELNPNAQ 52
+ P + + H+ R D W+ ++ +P +T ++ E N +
Sbjct: 32 VLPSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQK 91
Query: 53 EVARWALGEWSKVVDLTFEETSI-----------HSDIKF--ISSNNG----YVCTPR-- 93
E AR +L WS + ++ F E ++ +DI F I NG Y P
Sbjct: 92 EHARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTY 151
Query: 94 ----------YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ S Y+ N ++ YG + TI+ HEIGH LGLMHPG YN G
Sbjct: 152 AYGKDLSGQAWFSDYYYAGN-TTPELGNYG--RLTII-----HEIGHTLGLMHPGDYNAG 203
Query: 144 YPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS- 201
V G + +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA +
Sbjct: 204 QNVPGYLKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTR 263
Query: 202 LGNNIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G+++Y + I +++DSGG+D D + IDL ++S
Sbjct: 264 TGDDVYGFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFY-QDQLIDLRAGNFSD 322
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+GG +KN++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 323 VGGLQKNVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY 378
>gi|62754179|gb|AAX99107.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 145/315 (46%), Gaps = 47/315 (14%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN 86
F+ KPD + H F + N + A+ ++ W+ V ++ F ET+ D K +
Sbjct: 79 FLESKPDNMPWHISEF--SAFNEAQKAAAKLSIQSWADVANINFVETT---DAKEANVTF 133
Query: 87 GYV---CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------LHEIGHALG 133
G+ T Y Y + W Y T L+++ HEIGH LG
Sbjct: 134 GFFDVSLTGSYAFAYLPTPEKTQVGTW-YNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLG 192
Query: 134 LMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP YN P Y Y DS +VMSYF +++ D Y + P+++DI A
Sbjct: 193 LQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDFKGIYSSAPLLNDISA 252
Query: 191 VQKIYGAPKGSLGNNIYKIE----------------VQQKDSPFIQTIYDSGGDDLLDLT 234
+Q +YGA NN + + + ++S + T +D+GG+D D +
Sbjct: 253 IQAVYGA------NNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFS 306
Query: 235 -LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
G + I+LN S+S +GG + +++IA+ IE+ +G SGNDV+IGN A N +
Sbjct: 307 GFTQGQR--INLNEASFSDVGGLKGDVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGA 364
Query: 294 GNDVFDGSSGLDTFF 308
G+D+ G G D +
Sbjct: 365 GDDIIYGGLGADNLW 379
>gi|107100698|ref|ZP_01364616.1| hypothetical protein PaerPA_01001725 [Pseudomonas aeruginosa PACS2]
Length = 472
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 164/353 (46%), Gaps = 52/353 (14%)
Query: 1 MHNIKPVYTTERIADHLLRDQY-WS----------NYFIRYKPDVL--TTHRLSFDITEL 47
+ N P YT ++ A+ +LR+Q W +Y KP+ T + DI L
Sbjct: 25 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 84
Query: 48 NP------NAQEVARWALGEWSKVVDLTFEETSI--HSDIKF--ISSNNG---YVCTP-- 92
Q A+ +L WS V ++ F + D+ F SS+ G + P
Sbjct: 85 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 144
Query: 93 ----RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PV 146
+ S Y + ++ A+V G HEIGH LGL HPG YN G P
Sbjct: 145 PDALKGQSWYLINSSY-SANV---NPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPT 200
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA + G+
Sbjct: 201 Y-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDT 259
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
+Y S + +++D+GG+D LD + G +N I+LN ++ S +GG
Sbjct: 260 VYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFS--GFSQNQKINLNEKALSDVGG 317
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N++IA +E+ +G SG+D++IGN NV +GND+ G G D +
Sbjct: 318 LKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLW 370
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 25/206 (12%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ Q++ D Y + P
Sbjct: 178 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAP 236
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
++ DI A+QK+YGA + G+ +Y S + +++D+GG+D LD
Sbjct: 237 LLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDF 296
Query: 234 TLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G +N I+LN ++ S +GG + N++IA +E+ +G SG+D++IGN NV
Sbjct: 297 S--GFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGG 354
Query: 293 SGNDVF---------DGSSGLDTFFY 309
+GND+ G +G DTF Y
Sbjct: 355 AGNDILYGGLGADQLWGGAGADTFVY 380
>gi|296390372|ref|ZP_06879847.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAb1]
Length = 472
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 25/206 (12%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ Q++ D Y + P
Sbjct: 178 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAP 236
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
++ DI A+QK+YGA + G+ +Y S + +++D+GG+D LD
Sbjct: 237 LLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDF 296
Query: 234 TLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G +N I+LN ++ S +GG + N++IA +E+ +G SG+D++IGN NV
Sbjct: 297 S--GFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGG 354
Query: 293 SGNDVF---------DGSSGLDTFFY 309
+GND+ G +G DTF Y
Sbjct: 355 AGNDILYGGLGADQLWGGAGADTFVY 380
>gi|8895497|gb|AAF80994.1| metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 165/379 (43%), Gaps = 70/379 (18%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP ++ ++ ADHLLRD + + K D+ T S LN NAQ
Sbjct: 38 NGKPSFSVDQAADHLLRDGASYKDVNHNGKIDLTYTFLTSASSATLNKHGISGFSQFNAQ 97
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ WS V +++F E++ D N GY T
Sbjct: 98 QKAQAVLAMQSWSDVANVSFTESASGGDTHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DN 151
Y + N DV YG EIGH LGL HPG YN G D
Sbjct: 158 WYLTNSSYTPN-KTPDVNNYG-------RQTLTQEIGHTLGLAHPGDYNAGTGNPSCKDA 209
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNNI 206
D+ D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YG + G+
Sbjct: 210 DHGQDTRGYSVMSYWSESNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGGVYSTRAGDTT 269
Query: 207 YKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGY 256
Y + +++D GG+D LD + G +N I+ N S+S +GG
Sbjct: 270 YGFNSNTGRDFYSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINPNEASFSDVGGL 327
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTF 307
N++IA+ +E+ G SGND++IGN+A N+ +GND+ G +G DTF
Sbjct: 328 VGNVSIAKGVTVENAFGGSGNDLIIGNNAANLIKGGAGNDIIYGGGGADQLWGGAGKDTF 387
Query: 308 FYYA-----PSYLYKIYRF 321
Y A P KI+ F
Sbjct: 388 VYGASSDSKPGAADKIFDF 406
>gi|294677599|ref|YP_003578214.1| M10 family peptidase [Rhodobacter capsulatus SB 1003]
gi|3128317|gb|AAC16169.1| potential outer membrane secretion protein [Rhodobacter capsulatus
SB 1003]
gi|294476419|gb|ADE85807.1| peptidase, M10 family/hemolysin-type calcium-binding repeat family
protein [Rhodobacter capsulatus SB 1003]
Length = 1028
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 136/317 (42%), Gaps = 19/317 (5%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
+T ++ L+R Y+ Y + D T SF + + + AL WS V
Sbjct: 4 STFTEDQAVQQLIR-GYFGGYTYGWALDASRTLTYSF-AAAVTTAERALIETALDSWSAV 61
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHN 123
+TF + I F +S G C + + A W YG G+
Sbjct: 62 AGITFVRVASGGQIGFQNSAAGAYCAMSGTGTNMVSATVNVASSWFSNYGGTLGSYSYQT 121
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-MMDASFGYCAT 182
+HEIGHALGL H G+YNG + D Y NDS+ TSVMSYF D+ A+ Y T
Sbjct: 122 YVHEIGHALGLGHTGNYNG-SARFATDALYANDSWQTSVMSYFAQTDNPNTGATHAYLLT 180
Query: 183 PMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKD-----------SPFIQTIYDSGGDDL 230
PM DI A++ +YGAP GN Y D + T+ D+ G D
Sbjct: 181 PMAFDIAAMRALYGAPAAVHGGNTTYGSGSTAGDGLDYLATASHRANVAFTLMDTDGIDT 240
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LD + IDL + S + G NM I TVIE V +G D + GN+A N
Sbjct: 241 LDFSARA-EAARIDLTPGAISDLFGQRGNMVIYAGTVIEHVRSGAGADRITGNTAANRLA 299
Query: 291 ESSGNDVFDGSSGLDTF 307
+GND G +G DT
Sbjct: 300 AGAGNDTLAGGAGDDTL 316
>gi|226328853|ref|ZP_03804371.1| hypothetical protein PROPEN_02754 [Proteus penneri ATCC 35198]
gi|225202039|gb|EEG84393.1| hypothetical protein PROPEN_02754 [Proteus penneri ATCC 35198]
Length = 390
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 154/324 (47%), Gaps = 40/324 (12%)
Query: 55 ARWALGEWSKVVDLTFEETS--IHSDIKFISSNN------GYVCTPRYDS--------RY 98
AR +L WS + ++ F E + SDI F + + Y P S +
Sbjct: 11 ARQSLDAWSDIANIKFTEVAPGTKSDITFGNITDPYGQFQAYATLPNTYSYGRDLSGQAW 70
Query: 99 FMEINFDKADVWRYG-IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
F + + G G+ TI+ HEIGH LGLMHPG YN G V G + +DY D
Sbjct: 71 FSDYYYAGNTTPELGNYGRLTII-----HEIGHTLGLMHPGDYNAGQNVPGYLKSDYAED 125
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S +VMSY+ ++ Y P++ DI A+Q +YGA + G+++Y
Sbjct: 126 SRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVYGFNSNTGI 185
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ I +++DS G+D D + IDL +S +GG +KN++IAQ
Sbjct: 186 DYYTATSSNDKLIFSVWDSSGNDTFDFSGFY-QDQIIDLREGHFSDVGGLQKNVSIAQGV 244
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF--YYAPSYLYKIYRFENA 324
IE+ +G SGND++ GN A+N+ GND+ G G D + + +++YK E +
Sbjct: 245 TIENAIGGSGNDIIYGNDADNILIGGGGNDILYGGGGQDILWGDTGSNTFVYK----EIS 300
Query: 325 IIVYDANEHKQDFLSDVERLRFAD 348
+ A + DF S ++++ ++
Sbjct: 301 DSLASAADKIMDFKSGIDKIDLSE 324
>gi|31335337|gb|AAP44489.1| extracellular alkaline metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 170/386 (44%), Gaps = 84/386 (21%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 97
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
+ A+ AL W+ V ++TF E + S +G++ Y S D A +
Sbjct: 98 QKAQAALAMQSWADVANVTFTEKA--------SGGDGHMTFGNYSSGQ------DGAAAF 143
Query: 111 RYGIGKGT-------ILSHNA-----------------LHEIGHALGLMHPGSYNGGY-- 144
Y G G L++N+ HEIGH LGL HPG YN G
Sbjct: 144 AYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGN 203
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG 200
P Y D Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 204 PTYN-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLS 262
Query: 201 S--------LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTES 249
+ +N + + + +++D GG+D LD + G +N I+L S
Sbjct: 263 TRATDTTYGFNSNTGRDFLSASSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLTATS 320
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDG 300
+S +GG N++IA+ IE+ G SGND++IGN N +GND+ G
Sbjct: 321 FSDVGGLVGNVSIAKGVTIENAFGGSGNDLIIGNQVANTIKGGAGNDLIYGGGGADQLWG 380
Query: 301 SSGLDTFFYYA-----PSYLYKIYRF 321
+G DTF Y A P KI+ F
Sbjct: 381 GTGSDTFVYGASSDSRPGAADKIFDF 406
>gi|164665003|gb|ABY65933.1| AprX [Pseudomonas fluorescens]
Length = 482
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 159/361 (44%), Gaps = 59/361 (16%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 38 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 97 LQKGQAVLAMQSWADVANVTFTERASGGDFHMTFGNYSSGQDGAAAFAYLPGTNEKYHTS 156
Query: 102 ---------INFDKADVWRYGI---GKGTILSHNALHEIGHALGLMHPGSYNGGY--PVY 147
IN G+ G+ T+ HEIGH LGL HPG YN G P Y
Sbjct: 157 GTDGTSWYLINNSYTANINPGLNNYGRQTLT-----HEIGHTLGLDHPGDYNAGTGNPSY 211
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-L 202
D DY D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA +
Sbjct: 212 -RDADYGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRA 270
Query: 203 GNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSS 252
G+ Y + + +++D GG+D LD + G +N I+LN S+S
Sbjct: 271 GDTTYGFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLNETSFSD 328
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG N++IAQ +E+ G SGND++IGN+ N +GND+ G G D + A
Sbjct: 329 VGGLVGNVSIAQGVTVENAFGGSGNDLLIGNAVANTLKGGAGNDLIYGGGGADKLWGGAG 388
Query: 313 S 313
S
Sbjct: 389 S 389
>gi|312959818|ref|ZP_07774334.1| alkaline metalloprotease precursor AprA [Pseudomonas fluorescens
WH6]
gi|311285984|gb|EFQ64549.1| alkaline metalloprotease precursor AprA [Pseudomonas fluorescens
WH6]
Length = 552
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 152/333 (45%), Gaps = 57/333 (17%)
Query: 5 KPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP Y+T++ A HL R WS+ K D+ T F E + R L W+
Sbjct: 27 KPSYSTDKAAKHLTRSGSRWSDRNKDKKIDLSYTLAPGFTSAE-----KHRIREGLKSWA 81
Query: 64 KVVDLTFEETSIHSD----IKFISS-NNGYVCTPRYDSRYFMEINFDKADVWRY-GIGKG 117
+V ++TF E + D IK + G+ P + YF E + + + + G
Sbjct: 82 EVTNVTFTENATGRDGVLKIKGLPDYPGGWATLP---NPYFEEGSVNVGTSRTHTKLEHG 138
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T +HE+GHA+GL HP +G Y D+ +VMSY DASF
Sbjct: 139 TQFDKTFVHEVGHAIGLKHP---------HGDVEPYREDTSAYTVMSYH-------DASF 182
Query: 178 G-------YCATPMVSDIVAVQKIYGAP------------KGSLGNNIYKIEVQQKDSPF 218
G + PM+ DI AVQ++YGA + G + Y ++ +D P
Sbjct: 183 GDHPYERKKVSAPMLHDIAAVQRLYGANTETRKTDTTYGFNANAGRDFYTLK-SARDKPV 241
Query: 219 IQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++D+GG D LD + G + I L ES+S +GG N++IA+ +E+ VG G
Sbjct: 242 F-CVWDAGGTDTLDFS---GFRQDQKISLKAESFSDVGGMIGNVSIAKGVTVENAVGGFG 297
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+D +IGN+ANN G D +G+ G + F Y
Sbjct: 298 HDTLIGNTANNRLTGGPGADTLEGNGGRNVFAY 330
>gi|16124999|ref|NP_419563.1| alkaline metalloproteinase [Caulobacter crescentus CB15]
gi|221233720|ref|YP_002516156.1| secreted protease precursor sapA [Caulobacter crescentus NA1000]
gi|13421979|gb|AAK22731.1| alkaline metalloproteinase, putative [Caulobacter crescentus CB15]
gi|220962892|gb|ACL94248.1| secreted protease precursor sapA [Caulobacter crescentus NA1000]
Length = 658
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 180/439 (41%), Gaps = 68/439 (15%)
Query: 5 KPVYTTERIADHLLRDQY-WSNYF-----IRYKPDVLTTHRLSFDITELNP-NAQEV--A 55
K T A LLR + WSN F + Y + D + NA ++ A
Sbjct: 43 KKSLTVPEAALQLLRSEPGWSNQFLVPATVTYAFRATAPASMPSDTGGFSQFNAAQILQA 102
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFD---------- 105
AL WS V ++TF + + S+N + + + F
Sbjct: 103 EKALQAWSDVANITFVRVGQGTSGEAAYSDNASILFANFSTGSEGSAGFAYYPGNPAASS 162
Query: 106 -KADVW--------------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VY 147
DVW YG G +L +HE+GHA+G+ HP YN Y
Sbjct: 163 RSGDVWIKSTAGYNTNPTGSNYG---GMVL----VHELGHAIGIAHPSEYNASADDTLTY 215
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG--YCATPMVSDIVAVQKIYGAPKGS-LGN 204
+ Y DS +VMSYF ++ SFG Y ++P++ DI A Q YGA + G+
Sbjct: 216 AANATYYQDSRQYTVMSYF--SEANTGGSFGGAYASSPLLDDIAAAQLAYGANMTTRTGD 273
Query: 205 NIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+Y F T ++D+GG D LD + V IDL +SS+GG
Sbjct: 274 TVYGFNSTAGREWFAATSSSTRLVFAVWDAGGVDTLDFSGYR-VAQTIDLRAGYFSSVGG 332
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N+TIA + VIE+ +G S D + GN+ +N +G D+ DG G+DT +
Sbjct: 333 LKGNVTIAMNAVIENAIGGSAADTINGNAVDNRLTGGAGADILDGGRGVDTAVFSGAYGN 392
Query: 316 YKIYRFENAI--IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-------YTA 366
Y + N ++ D L+++E L F D+ + V+ + + + ++A
Sbjct: 393 YTLTAATNGAWSVLDRVGTDATDTLANIEFLAFTDRTVTLVDSRVATAISNILRLQTFSA 452
Query: 367 SYEDLIQVIGQDVFESMKH 385
S E L + + + H
Sbjct: 453 SAEPLSKSLAASMAAGASH 471
>gi|73533607|gb|AAZ76880.1| protease [Pseudomonas fluorescens]
Length = 477
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 170/386 (44%), Gaps = 84/386 (21%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 97
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
+ A+ AL W+ V ++TF E + S +G++ Y S D A +
Sbjct: 98 QKAQAALAMQSWADVANVTFTEKA--------SGGDGHMTFGNYSSGQ------DGAAAF 143
Query: 111 RYGIGKGT-------ILSHNA-----------------LHEIGHALGLMHPGSYNGGY-- 144
Y G G L++N+ HEIGH LGL HPG YN G
Sbjct: 144 AYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGN 203
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG 200
P Y D Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 204 PTYN-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLS 262
Query: 201 S--------LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTES 249
+ +N + + + +++D GG+D LD + G +N I+L S
Sbjct: 263 TRATDTTYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLTATS 320
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDG 300
+S +GG N++IA+ IE+ G SGND++IGN N +GND+ G
Sbjct: 321 FSDVGGLVGNVSIAKGVTIENAFGGSGNDLIIGNQVANTIKGGAGNDLIYGGGGADQLWG 380
Query: 301 SSGLDTFFYYA-----PSYLYKIYRF 321
+G DTF Y A P KI+ F
Sbjct: 381 GTGSDTFVYGASSDSRPGAADKIFDF 406
>gi|295690966|ref|YP_003594659.1| serralysin [Caulobacter segnis ATCC 21756]
gi|295432869|gb|ADG12041.1| Serralysin [Caulobacter segnis ATCC 21756]
Length = 662
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 175/431 (40%), Gaps = 65/431 (15%)
Query: 5 KPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPN---------AQEVA 55
K T + A LLR + ++ ++ V +R S PN A ++A
Sbjct: 38 KTSLTIPQAASQLLRGEPGWSFQLQQAATVSYAYRAS---ASTMPNDTGGFSTFSAAQIA 94
Query: 56 RW--ALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR-------YFMEINFDK 106
+ AL WS V ++F + SN + Y S F N+
Sbjct: 95 QTEKALAAWSDVARISFVRVGEGTSGSAAYSNEAAILFGNYSSGEDGAAAFAFYPGNYAT 154
Query: 107 A----DVWRYGIGKGTILSHNA------------LHEIGHALGLMHPGSYNG---GYPVY 147
+ DVW + LS+NA +HE+GHA+GL HPG Y+ Y
Sbjct: 155 SNRSGDVW-----INSTLSYNANPTGTNYGGMVLIHELGHAIGLAHPGDYDADANTTLTY 209
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNI 206
+ Y DS +VMSYF ++ S Y ++P++ DI A Q YGA + G+ +
Sbjct: 210 AANAGYYEDSRQYTVMSYFSESNTGGSFSGAYASSPLLDDIAAAQLAYGANMSTRTGDTV 269
Query: 207 YKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
Y + I ++D+GG D LD + V IDL +SS+GG
Sbjct: 270 YGFNSNAGRDWFSATSTSTRLIFAVWDAGGTDTLDFSGYR-VAQTIDLRAGYFSSVGGLT 328
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N++IA IE+ +G + D++ GNSA N GND DG G DT + Y
Sbjct: 329 GNVSIAIGATIENALGGTAADIINGNSAANRIVGGQGNDTLDGGQGADTAVFSGKVASYA 388
Query: 318 IYRFENA--IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-------EYTASY 368
I + +A D + ++E L FAD + V+ + + + +A
Sbjct: 389 ITPLSTGGWQVKDNAGTDGTDVVVNIESLVFADGAVSLVDSRVATAMGGLLRLKPLSAGA 448
Query: 369 EDLIQVIGQDV 379
E L + + D+
Sbjct: 449 ETLAKSLAADM 459
>gi|302384379|ref|YP_003820202.1| serralysin [Brevundimonas subvibrioides ATCC 15264]
gi|302195007|gb|ADL02579.1| Serralysin [Brevundimonas subvibrioides ATCC 15264]
Length = 1576
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 115/246 (46%), Gaps = 17/246 (6%)
Query: 122 HNALHEIGHALGLMHPGSYNGGYPV---YGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
H HE+GHA+GL HP +YN V YG D Y DS +VMSYF ++ + G
Sbjct: 222 HTLTHEVGHAIGLSHPAAYNASEGVSITYGNDATYYEDSRQYTVMSYFSESNTGANFRRG 281
Query: 179 ---YCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQT---------IYDS 225
Y A P++ DI A Q++YGA + G+ Y + F T I+D+
Sbjct: 282 NAQYSAVPLLDDIAAAQRLYGANMSTRTGDTTYGFNSTADRAWFSATSSSSSLIFAIWDA 341
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D LD + IDL ++S++GG N+ IA IE+ +G SGND + GNSA
Sbjct: 342 GGIDTLDFSGFN-QSQVIDLRQGAFSNVGGLIGNVAIAAGAAIENAIGGSGNDTIYGNSA 400
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NN G+D DG G+DT + Y + V + + +VE L
Sbjct: 401 NNRIDGGGGSDTIDGGLGVDTVVFGGARSAYSVSWNGQVGSVLTIGTGQTTTVRNVEFLA 460
Query: 346 FADQCI 351
F D I
Sbjct: 461 FTDMAI 466
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 280 VIGN-SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V GN +A +VF +S D DG +G+DT +Y + S+ + + + V + N + D L
Sbjct: 806 VAGNITATSVFGSAS--DRIDGGAGVDTVYYNSYSFPFTVTTSDGVTTVRNNNTGETDTL 863
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++VE ++F D +V + Q + + TA+ E L
Sbjct: 864 TNVEFIQFIDM---TVQLGQVAPISGTAAGETL 893
>gi|30410775|gb|AAC38255.2| alkaline protease [Pseudomonas fluorescens]
Length = 477
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 163/359 (45%), Gaps = 70/359 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNPNA---------- 51
N KP YT ++ A LLRD + ++ K D+ T S + +N +
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 97
Query: 52 -QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
+ A A+ WS V ++TF E + D G++ Y S D A +
Sbjct: 98 QKAQAALAMQSWSDVANVTFTEKATGGD--------GHMTFGNYSSGQ------DGAAAF 143
Query: 111 RYGIGKGT-------ILSHNA-----------------LHEIGHALGLMHPGSYNGG--Y 144
Y G G L++N+ HEIGH+LGL HPG YN G
Sbjct: 144 AYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGEGA 203
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG 200
P Y D Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 204 PTYN-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYN 262
Query: 201 S-LGNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTES 249
+ G+ Y + + +++D GG+D LD + G +N I+LN S
Sbjct: 263 TRAGDTTYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLNEAS 320
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+S +GG N++IA+ +E+ G +GND++IGN+A NV +GND+ G G D +
Sbjct: 321 FSDVGGLVGNVSIAKGVTVENAFGGAGNDLIIGNNAANVIKGGAGNDLIYGGGGADQLW 379
>gi|251826356|gb|ACT21086.1| extracellular metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 170/386 (44%), Gaps = 84/386 (21%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 97
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
+ A+ AL W+ V ++TF E + S +G++ Y S D A +
Sbjct: 98 QKAQAALAMQSWADVANVTFTEKA--------SGGDGHMTFGNYSSGQ------DGAAAF 143
Query: 111 RYGIGKGT-------ILSHNA-----------------LHEIGHALGLMHPGSYNGGY-- 144
Y G G L++N+ HEIGH LGL HPG YN G
Sbjct: 144 AYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGN 203
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG 200
P Y D Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 204 PTYN-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFN 262
Query: 201 S--------LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTES 249
+ +N + + + +++D GG+D LD + G +N I+L S
Sbjct: 263 TRATDTTYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLTATS 320
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDG 300
+S +GG N++IA+ IE+ G +GND++IGN N +GND+ G
Sbjct: 321 FSDVGGLVGNVSIAKGVTIENAFGGAGNDLIIGNQVANTIKGGAGNDLIYGGGGADQLWG 380
Query: 301 SSGLDTFFYYA-----PSYLYKIYRF 321
+G DTF Y A P KI+ F
Sbjct: 381 GAGSDTFVYGASSDSKPGAADKIFDF 406
>gi|209966645|ref|YP_002299560.1| Serralysin precursor, putative [Rhodospirillum centenum SW]
gi|209960111|gb|ACJ00748.1| Serralysin precursor, putative [Rhodospirillum centenum SW]
Length = 650
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 187/436 (42%), Gaps = 83/436 (19%)
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM-- 173
GT + +HE+GHALGL HP G P V DS +VMSY P +S +
Sbjct: 235 PGTDAFNTVIHELGHALGLKHPFE---GVPSVSV----AEDSVRYTVMSYTYPDNSEIWV 287
Query: 174 ------DASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSG 226
++ T M+ DI+AVQ +YG + G+ +Y + ++ F +TI+D G
Sbjct: 288 EYPDRWGSALVSPRTLMLYDILAVQYLYGVNTATRAGDTVYSWQPNER---FFETIWDGG 344
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIG------------------------GYEKNMTI 262
G D +D + + IDL +SSI N+ I
Sbjct: 345 GTDTVDAS-AQTLDCVIDLRDGHFSSIAIRATEAQKRMDLPADADYLTTPTYDGRDNLAI 403
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A VIE+ G +GND +IGN+A N+ +G+D G +G DT + + +I
Sbjct: 404 AYGAVIENARGGAGNDTLIGNAAANLLEGGAGDDRLSGGTGDDTIDGGSGVDVIRIEAAR 463
Query: 323 NAIIV---------YDANEHKQDFLSDVERLRFADQCI-DSVNVKQRSILE--------- 363
+A+ + D S VE +RF DQ + ++ V+ ++
Sbjct: 464 SAVTLEATGPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEA 523
Query: 364 -YTASYEDLIQVI--GQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSD 418
Y A + D+ + GQ V ++H+ FG +EGRD T FD YL + D+R +
Sbjct: 524 FYLARWADVRAAVNAGQ-VMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRAAVEAG 582
Query: 419 RGAAA-RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFG 474
+ + HY+ G +E R+P A+ DL PD+ G D H+ +G
Sbjct: 583 QVRSGYEHYLNSGWREDRDPSAWF---------DLSAYLQRNPDVADAGIDPLRHWLVWG 633
Query: 475 CEEGRFVT-FDSYLYL 489
E R T D+ L+L
Sbjct: 634 IGENRIATAADTGLWL 649
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAA-RHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL + D+R + + + HY+ G EGR+P F Y+A D + A
Sbjct: 520 FDEAFYLARWADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWAD-VRAA 578
Query: 541 ADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+A V++G +H+ N G+ E R S F+ YL D+ + G D +H++ G
Sbjct: 579 VEA-GQVRSGYEHYLNSGWREDRDPSAWFDLSAYLQRNPDVADA-GID---PLRHWLVWG 633
Query: 599 MKEGR 603
+ E R
Sbjct: 634 IGENR 638
>gi|30014084|emb|CAD89200.1| metalloprotease [Pseudomonas fluorescens]
Length = 481
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 160/360 (44%), Gaps = 62/360 (17%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNPNA---------- 51
N KP ++ ++ A LLRD + + K ++ T S + +N +
Sbjct: 44 NGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGITGFSQFSAQ 103
Query: 52 -QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
Q A+ A+ W+ V ++TF E + D N GY T
Sbjct: 104 QQAQAKLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 163
Query: 93 RY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYG 148
Y +S Y N D + R HEIGH+LGL HPG YN G P Y
Sbjct: 164 WYLINSGYTQNKNPDLNNYGR----------QTLTHEIGHSLGLAHPGDYNAGNGNPTYN 213
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG---- 200
D Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 214 -DASYGQDTRGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANTTTRTG 272
Query: 201 ----SLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSI 253
+N + + + +++D+GG D LD + G +N I+LN S+S +
Sbjct: 273 DTTYGFNSNTGRDFLSASSSSDKVVFSVWDAGGKDTLDFS--GFTQNQKINLNDASFSDV 330
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG N++IA+ +IE+ +G SGND++IGNS N +GND+ G G D + A S
Sbjct: 331 GGMVGNVSIAKGAIIENAIGGSGNDLLIGNSVANELKGGAGNDILWGGGGADKLWGGAGS 390
>gi|307131044|ref|YP_003883060.1| secreted protease C [Dickeya dadantii 3937]
gi|306528573|gb|ADM98503.1| Secreted protease C precursor [Dickeya dadantii 3937]
Length = 477
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 170/382 (44%), Gaps = 58/382 (15%)
Query: 5 KPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSF-----------DITELNPNAQ 52
KP YT E+ D + R W+ + K LT L + N
Sbjct: 41 KPSYTLEQARDQITRGNITWNGEKVFGKSAALTYSFLQSVADSDMPDNFKGFVKFNAAQI 100
Query: 53 EVARWALGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCTPR----YDSRYF------- 99
+ + AL W+ V ++TF E + I+F Y TP +S+ F
Sbjct: 101 QQTKLALQSWADVANVTFSEAKDGERATIQF----GNYTLTPDGNTDNNSQAFGFYPGNW 156
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNAL-HEIGHALGLMHPGSYNG--GYPVYGVDN 151
N+++AD R I + N L HEIGH LGL HPG Y+ G P Y D
Sbjct: 157 KWAGSAWFNYNQADNQRPDINE---FGRNTLTHEIGHTLGLYHPGDYDASDGNPGY-KDV 212
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y D+ S+MSY+ + D + A P++ DI A+QK+YGA + G+ +Y
Sbjct: 213 TYAEDTRQFSIMSYWNEGYTGGDFHGYHAAAPLMDDIAAIQKLYGANMSTRTGDTVYGFH 272
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+P I +++D+GG+D D + I L + ++S +GG + N++
Sbjct: 273 SNSGRDFYTATDSKTPLIFSVWDAGGNDTFDFSGYS-ANQRISLISGTFSDVGGLKGNVS 331
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA V+E+ +G SG+DV++GN ++N +GNDV G G D A ++ +Y +
Sbjct: 332 IAAGAVMENAIGGSGHDVIVGNLSDNRIDGGAGNDVLYGDGGADILTGGAGKDIF-VYAW 390
Query: 322 ENAIIVYDANEHKQDFLSDVER 343
E D+ D ++D +R
Sbjct: 391 EK-----DSLSSAPDTITDFQR 407
>gi|254471059|ref|ZP_05084462.1| secreted protease C [Pseudovibrio sp. JE062]
gi|211960201|gb|EEA95398.1| secreted protease C [Pseudovibrio sp. JE062]
Length = 592
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 107/198 (54%), Gaps = 16/198 (8%)
Query: 125 LHEIGHALGLMHPGSYNGGYPV---YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+HE+GHA+GL HPG YN G V Y + D+ SVMSYF +S D++ GY
Sbjct: 275 MHEVGHAVGLAHPGDYNAGPGVRITYDDHAQFRQDTQQYSVMSYF--DESNADSNLGYGG 332
Query: 182 TP---MVSDIVAVQKIYGAPKGSLGNN-IYKIEVQ-------QKDSPFIQTIYDSGGDDL 230
P M DI+A+Q++YG + ++ +Y + P TI+D+GG+D
Sbjct: 333 FPDTLMPLDILALQQLYGVNTTTRADDTVYGYNSNAGGVYDFSEGMPSALTIWDAGGNDT 392
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D++ G V I L S+S++GG N+ IA + VIE+ +GS GND +IGN+A N
Sbjct: 393 IDMSGAGKVNQMISLIDGSFSNVGGGLSNLAIAYNAVIENAIGSGGNDTIIGNAAGNTLT 452
Query: 291 ESSGNDVFDGSSGLDTFF 308
+GND G+ G D
Sbjct: 453 GKAGNDTLIGNGGKDKLI 470
>gi|110681245|ref|YP_684252.1| VBCS repeat-containing protein [Roseobacter denitrificans OCh 114]
gi|109457361|gb|ABG33566.1| VCBS repeat domain protein [Roseobacter denitrificans OCh 114]
Length = 1301
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 126/269 (46%), Gaps = 38/269 (14%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATP 183
HE+GHALGL H G YNG G D D++NDS+ ++MSYF +++ + ASF + TP
Sbjct: 260 FHEVGHALGLGHQGLYNGSGSFPG-DADFDNDSWQATMMSYFSQNENTTIPASFAFLQTP 318
Query: 184 MVSDIVAVQKIYG----------APKGSLGNNIYKIEVQQKDSP-------------FIQ 220
M D +A+Q IYG LG+ +Y S
Sbjct: 319 MAVDWIALQDIYGDQSFGGTNFGITNAFLGDTVYGFNTNISASTSNIWAEFATYANRTAS 378
Query: 221 TIYDSGGDDLLDLT------LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
TI D+GG D LD + +I S S+IGG N+T+A+ T+IE+ +G
Sbjct: 379 TIVDAGGIDTLDFSGYSANQVINLTPTSQFATAPSISNIGGLTGNLTLAEGTIIENAIGG 438
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYRFENAIIVY 328
SG+D GN A+NVF + GND F+ S G DT++ A + L+ Y F +
Sbjct: 439 SGSDTFFGNDASNVFRGNGGNDTFNDSLGDDTYYGGAGTDTVDFLGLFSNYSFSISGTFL 498
Query: 329 DANEHKQDFLSD-VERLRFADQCIDSVNV 356
D + + VE L F DQ N+
Sbjct: 499 SVINVAMDLVENTVEFLSFDDQTFSFQNI 527
>gi|47591|emb|CAA27738.1| unnamed protein product [Serratia sp.]
Length = 486
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 159/350 (45%), Gaps = 51/350 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLT---------THRLSFD--ITELNPN 50
N K ++ E+ + R+ Q W+ Y + +P LT + ++ D +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADV 109
Q+ A+ +L W+ V ++TF E + N YD Y + F +
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYD--YGTQAYAFLPNTI 158
Query: 110 WR---------YGIGKGTILSHNA---------LHEIGHALGLMHPGSYNGGY--PVYGV 149
W+ Y + + + H A HEIGHALGL HPG YN G P Y
Sbjct: 159 WQGQDLGGQTWYNVNQSNV-KHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTY-R 216
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 217 DVTYAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYG 276
Query: 209 ---------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ I +D+GG+D D + G N I+LN +S+S +GG +
Sbjct: 277 FNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFS--GYTANQRINLNEKSFSDVGGLKG 334
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N++IA IE+ +G +++GN+ANNV +GNDV G G D +
Sbjct: 335 NVSIAAGVTIENAIGFR-QRLIVGNAANNVLKGGAGNDVLFGGGGADELW 383
>gi|284006975|emb|CBA72251.1| metalloprotease [Arsenophonus nasoniae]
Length = 508
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 145/300 (48%), Gaps = 43/300 (14%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIHS-DIKFIS----SNNGYVCTPRYDSR--- 97
+L Q+ AR AL W+ V ++TF E + + +I F + + P+ ++
Sbjct: 62 QLTEKQQQQARIALDSWADVANITFTEDATQTTNINFGNFHSMQGQAFAYLPQSGAQAGQ 121
Query: 98 --YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG------------ 143
+ E + + D G+ ++ HEIGHA+GL HPG YN
Sbjct: 122 CWFNAEDHPENLDPQPGNYGRLVLV-----HEIGHAIGLSHPGDYNWASIDQQTQTLKWT 176
Query: 144 -----YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
Y + YE DS SVMSY+ + + Y + P++ DI AVQ +YGA
Sbjct: 177 RNTDSALSYSANAPYEEDSRQFSVMSYWSEYHTGGNFHGHYASAPLIDDIAAVQALYGAN 236
Query: 199 -KGSLGNNIYKI-EVQQKD-----SPFIQTI---YDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ G+++Y KD P I I +D+GG+D LD + ++ I+LN
Sbjct: 237 MRTRTGDDVYGFNSTTNKDWYTISDPRIGCIFSVWDAGGNDTLDFSGYSKLQ-LINLNAG 295
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++S++GG+ KN++IA++TVIE+ G G D +IGNS +N+ +G D+ G G D +
Sbjct: 296 TFSNVGGWIKNVSIAKNTVIENAFGGYGQDTIIGNSVDNIIKGGAGEDIIYGGLGQDILW 355
>gi|3135220|dbj|BAA28268.1| metalloprotease [Pseudomonas fluorescens]
Length = 476
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 159/367 (43%), Gaps = 68/367 (18%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNPNA---------- 51
N KP Y+ ++ A LLRD + + K D+ T S + +N +
Sbjct: 38 NGKPSYSVDQAATQLLRDGAAYRDVDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 97
Query: 52 -QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A A+ WS V ++TF E + D N GY T
Sbjct: 98 QKAQAALAMQSWSDVANVTFTEKATGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 158 WYLTNSSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 208
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 209 ATYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDT 268
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGG 255
Y + +++D GG+D LD + G +N I+LN S+S +GG
Sbjct: 269 TYGFNSNTGRDFYSATSNADKLVFSVWDGGGNDTLDFS--GFTQNQKINLNEASFSDVGG 326
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---------DT 306
N++IA+ IE+ G SGND++IGN+A NV +GND+ G G DT
Sbjct: 327 LVGNVSIAKGVTIENF-GGSGNDLIIGNNAANVIKGGAGNDIIYGGGGADQLWGGAGNDT 385
Query: 307 FFYYAPS 313
F Y A S
Sbjct: 386 FVYGASS 392
>gi|288959793|ref|YP_003450133.1| hypothetical protein AZL_a00580 [Azospirillum sp. B510]
gi|288962617|ref|YP_003452911.1| hemolysin-type calcium-binding protein [Azospirillum sp. B510]
gi|288912101|dbj|BAI73589.1| hypothetical protein AZL_a00580 [Azospirillum sp. B510]
gi|288914883|dbj|BAI76367.1| hemolysin-type calcium-binding protein [Azospirillum sp. B510]
Length = 427
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-A 457
FD YL DL V G+D AA HYI G +EGR+ AF +Y+A + DL+ AF +
Sbjct: 184 FDPLRYLAGNADLARVIGTDSAAARSHYIQSGAREGRSTTAFNPYQYLAGYGDLMAAFGS 243
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
DA Q H+ G EGR T F++ YL S DL FGSDR AA+RHYI G
Sbjct: 244 DA----QAAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGSDRNAASRHYIDSGRA 299
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
E R D F A Y ++ D+ AF DL A + H+ +GY E R P
Sbjct: 300 EQRRLDGFDATAYERANPDIAAAFGA--DLTAATR-HYVEYGYREHRRTAVQP 349
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRG 420
L Y A DL +VIG D + H+ + G EGR T F+ Y YL Y DL FGSD
Sbjct: 187 LRYLAGNADLARVIGTDSAAARSHYIQSGAREGRSTTAFNPYQYLAGYGDLMAAFGSDAQ 246
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AA HYI G++EGR+ AF A Y+AS+ DL+ AF D + + + E+ R
Sbjct: 247 AAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGS--DRNAASRHYIDSGRAEQRRL 304
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
FD+ Y + D+ FG+D AA RHY+ +G +E R
Sbjct: 305 DGFDATAYERANPDIAAAFGADLTAATRHYVEYGYREHR 343
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLR 496
D F L Y+A + DL + H+ G EGR T F+ Y YL Y DL
Sbjct: 182 DGFDPLRYLAGNADLARVIGTD---SAAARSHYIQSGAREGRSTTAFNPYQYLAGYGDLM 238
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
FGSD AA HYI G++EGR+ AF A Y+AS+ DL+ AF + A H+ +
Sbjct: 239 AAFGSDAQAAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGSDRN---AASRHYID 295
Query: 557 FGYEEGRSI-TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
G E R + F+ Y + D+ FG+D +AA +HY+ +G +E R
Sbjct: 296 SGRAEQRRLDGFDATAYERANPDIAAAFGADLTAATRHYVEYGYREHR 343
>gi|110597459|ref|ZP_01385746.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
gi|110341003|gb|EAT59474.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
Length = 549
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 153/337 (45%), Gaps = 48/337 (14%)
Query: 62 WSKVVDLTFEETSIHSD------IKFISSNNGYVCTPRYDSRYFMEINFDKADVW---RY 112
W+ V +L+F + + + + F S+ +G Y Y+ ADVW Y
Sbjct: 89 WAAVANLSFTQVADTAGSVGDFRLAFSSAVSGSWGWCYYPDDYWAS----AADVWINPAY 144
Query: 113 GIGKGTILS----HNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
G S ++ +HEIGH LGL HPG+Y+G P + DY L SVMSY
Sbjct: 145 ATGSSWTNSSFNYYSLIHEIGHGLGLKHPGNYSGTSSSGPYLPANLDYR----LYSVMSY 200
Query: 166 FMPQDSMMDASFGYCA---TPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
+DAS TPMV DI A+Q +YGA GNN Y + PF +T
Sbjct: 201 NDWHKWYVDASQTIAVLPETPMVYDIAAIQYLYGANNSYQTGNNTYTFDPAV---PFYKT 257
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--------GGYE--KNMTIAQHTVIESV 271
I+D+GG D +D++ +DL S+SS+ Y+ N+ IA +E+V
Sbjct: 258 IWDAGGTDTIDISNFT-TDCTVDLRAGSYSSLHYVNRGNSSNYDGSNNLGIAFGVTLENV 316
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +G+D + GNSA N GND +G G DT + S Y I ++ + VY
Sbjct: 317 KGGTGSDTITGNSAANTITGGGGNDTINGGDGSDTAIFSGNSSDYTI-TYDASSGVYTIT 375
Query: 332 EHK-----QDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + D LS VE +FAD + N+ ++
Sbjct: 376 DKRAGGEGSDHLSGVEHFQFADTTQINTNIPTVTLFS 412
>gi|149185554|ref|ZP_01863870.1| hypothetical protein ED21_21054 [Erythrobacter sp. SD-21]
gi|148830774|gb|EDL49209.1| hypothetical protein ED21_21054 [Erythrobacter sp. SD-21]
Length = 960
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 135/284 (47%), Gaps = 18/284 (6%)
Query: 37 THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS 96
+ ++FD++ L+ + + R +L W +TF E + + ++F++ R
Sbjct: 363 SRTITFDLSGLDTSLHDTVRVSLAAWGDAAGITFVEAAGGA-MQFVTGAENDASVTRVGG 421
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGV-DNDYE 154
F+E D G T + E+G ALGL H G YN G Y Y D Y
Sbjct: 422 --FIESATVTIDPATPGFASETRAYQVVMQEVGFALGLGHAGQYNNGQYVSYRAHDLVYL 479
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCA----TPMVSDIVAVQKIYGAPKGS-LGNNIYKI 209
NDS + +VMS F +++ AS GY + TPM++D+ A+Q IYGAP + G++ Y
Sbjct: 480 NDSNMLTVMSGFDNSSNVLLASQGYSSFDAITPMMADVAAIQAIYGAPTETRTGDDTYGF 539
Query: 210 EVQQKD-------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
D + T+ DS G D LD + I+L + ++GG N++I
Sbjct: 540 NSTAGDLYDAAVTTNAAYTVVDSAGVDTLDYSQHA-QSQVINLVSGRLMNVGGMTGNVSI 598
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
A TVIE+ +G SGND V GN N+ +GND G G DT
Sbjct: 599 AAGTVIENAIGGSGNDFVRGNDVANLIQGLAGNDTIRGLGGNDT 642
>gi|88809389|ref|ZP_01124897.1| hypothetical protein WH7805_09564 [Synechococcus sp. WH 7805]
gi|88786608|gb|EAR17767.1| hypothetical protein WH7805_09564 [Synechococcus sp. WH 7805]
Length = 1961
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 149/319 (46%), Gaps = 49/319 (15%)
Query: 39 RLSFDITE-------LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG---Y 88
+L+++IT L+ Q + R + + + F E + D +F +++G Y
Sbjct: 182 QLTYNITGWADDSNGLSAERQNLTREVFNVYEAITGIEFVEVATEGDFRFTDNDSGAYAY 241
Query: 89 VCTPRYDS-RYFMEINFDKADV----------WRYGIGK-GTILSHNALHEIGHALGLMH 136
+ YD I+++ A + W YG + HEIGHALGL H
Sbjct: 242 LGGGWYDQDPNTGTIDYNAAIIDYSVINVASSWFYGDSSYNSYTPQTIFHEIGHALGLGH 301
Query: 137 PGSYNGGY--PVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVAVQK 193
G YN G P Y Y ND++LT++MSY+ ++ ++AS Y TPM D +A+ K
Sbjct: 302 QGQYNAGNGNPTYENSAQYGNDTWLTTMMSYWSQTTNTNVNASRAYLQTPMTVDWIALDK 361
Query: 194 IYGAP-----KGSLGNNIYKI---------EVQQKDSPFIQ----TIYDSGGDDLLDLT- 234
+YG+ K GN +Y + E+ + I T+ D G D+L+++
Sbjct: 362 LYGSQGYGSFKAFNGNTVYGVGTNISSGTSEIMNNFATMISDTAYTLVDGSGYDILNVSN 421
Query: 235 -----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
I + ++ S SSIGG N+TI T++E +G SGND +GN A+NVF
Sbjct: 422 YSDDQFINLAPSELNGTLPSSSSIGGLVNNLTIGVGTILEEAIGGSGNDTFLGNIADNVF 481
Query: 290 FESSGNDVFDGSSGLDTFF 308
+G D F S G DT++
Sbjct: 482 RGGNGGDRFYDSFGSDTYY 500
>gi|1616941|dbj|BAA13503.1| alkaline proteinase [Pseudomonas aeruginosa]
Length = 476
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL P YN G P Y D Y D+ SVMSY+ Q++ D Y + P
Sbjct: 185 HEIGHTLGLSTP-DYNAGEGDPTY-ADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAP 242
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
++ DI A+QK+YGA + G+ +Y S + +++D+GG+D LD
Sbjct: 243 LLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDF 302
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ I+LN ++ S +GG + N++IA +E+ +G SG+D++ GN NV +
Sbjct: 303 SRF-SQNQKINLNEKALSDVGGLKGNLSIAAGVTVENAIGGSGSDLLYGNDVANVLKGGA 361
Query: 294 GNDVFDGSSGLDTFF--YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--- 348
GND+ G G D + A +++Y I + A + +DF+S +++ +
Sbjct: 362 GNDILYGGLGADQLWGGAGADTFVYAI-----SPSPPRAPDRVRDFVSGQDKIDLSGLHA 416
Query: 349 --------QCIDSVNVKQRSILEYTAS 367
Q +D+ + IL Y A+
Sbjct: 417 FVNGGLVLQYVDAFAGNAQGILSYDAA 443
>gi|260428691|ref|ZP_05782669.1| serralysin (Extracellular metalloproteinase) [Citreicella sp. SE45]
gi|260420285|gb|EEX13537.1| serralysin (Extracellular metalloproteinase) [Citreicella sp. SE45]
Length = 772
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 106/204 (51%), Gaps = 24/204 (11%)
Query: 125 LHEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
LHE+GHA+GL HPG YN GG YG Y DS+ SVMSYF + + + GY
Sbjct: 269 LHELGHAVGLSHPGDYNATAGGVITYGDQAAYLEDSYQYSVMSYF-DESNTTSSIGGYPD 327
Query: 182 TPMVSDIVAVQKIYGAPKG-SLGNNIYKI--------EVQQKDSPFIQTIYDSGGDDLLD 232
T ++ DI A+Q++YG G G+++Y + Q PF+ +I+D GG D LD
Sbjct: 328 TLLLHDIQALQQLYGVNYGYHAGDSVYGFNSTLGGAYDFSQNSDPFL-SIWDGGGRDRLD 386
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ GG +I L +S IGGY N++IA IE VG SG+D + GN+ +N
Sbjct: 387 VSGFGG-NQFITLVEGEFSDIGGYRGNVSIAYGAGIEEAVGGSGDDTLQGNALDNTLLGG 445
Query: 293 S---------GNDVFDGSSGLDTF 307
GND DG G D+
Sbjct: 446 GHDDLIRGGDGNDTIDGEGGADSI 469
>gi|163732799|ref|ZP_02140244.1| VCBS repeat domain protein [Roseobacter litoralis Och 149]
gi|161394159|gb|EDQ18483.1| VCBS repeat domain protein [Roseobacter litoralis Och 149]
Length = 1301
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 31/213 (14%)
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPM 184
HE+GHALGL H G YNG + D D++NDS+ ++MSYF +++ + ASF + TPM
Sbjct: 261 HEVGHALGLGHQGLYNGSGS-FPSDADFDNDSWQATMMSYFSQNENTTIPASFAFLQTPM 319
Query: 185 VSDIVAVQKIYG--APKGS--------LGNNIYKI-------------EVQQKDSPFIQT 221
D +A+Q +YG + G+ LG+ +Y E + T
Sbjct: 320 AVDWIALQDMYGDQSSGGTNFGISNAFLGDTVYGFNTNISANTSNIWAEFATYANRTAST 379
Query: 222 IYDSGGDDLLDLT------LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
I D+ G D LD + LI S S+IGG N+T+A+ T+IE+ +G S
Sbjct: 380 IVDAAGIDTLDFSGYSANQLINLTPTSQFATAPSISNIGGLTGNLTLAEGTIIENAIGGS 439
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G+D GN A+NVF + GND F+ S G DT++
Sbjct: 440 GSDTFFGNDASNVFRGNGGNDTFNDSLGDDTYY 472
>gi|153948040|ref|YP_001402983.1| metalloprotease [Yersinia pseudotuberculosis IP 31758]
gi|152959535|gb|ABS46996.1| metalloprotease [Yersinia pseudotuberculosis IP 31758]
Length = 442
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
++ NP A+ A+ W+ V +++F E S S + N GY P S
Sbjct: 77 VSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGS 136
Query: 97 RYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ IN+ D R G G + HEIGHALGL H + +G Y
Sbjct: 137 FSPIWINYSFSDNQHPSRLNYGGGVLT-----HEIGHALGLGHSHAPHG----------Y 181
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY QDS + Y +TP + DI A+Q +YGA G+ +Y
Sbjct: 182 TQQ---MSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNST 238
Query: 213 QKDSPFIQT---------IYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
F T ++D+GG+D D + G K I+LN +S +GG + N++
Sbjct: 239 SYRDHFTATHASDALIFCVWDAGGNDTFDFS---GYKQNQMINLNELCFSDVGGLKGNVS 295
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IA IE+ +G SG+D +IGN NN+ + G+D G+ G +TF Y
Sbjct: 296 IAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRY 343
>gi|186897322|ref|YP_001874434.1| peptidase M10 serralysin [Yersinia pseudotuberculosis PB1/+]
gi|186700348|gb|ACC90977.1| Peptidase M10 serralysin [Yersinia pseudotuberculosis PB1/+]
Length = 444
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
++ NP A+ A+ W+ V +++F E S S + N GY P S
Sbjct: 79 VSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGS 138
Query: 97 RYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ IN+ D R G G + HEIGHALGL H + +G Y
Sbjct: 139 FSPIWINYSFSDNQHPSRLNYGGGVLT-----HEIGHALGLGHSHAPHG----------Y 183
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY QDS + Y +TP + DI A+Q +YGA G+ +Y
Sbjct: 184 TQQ---MSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNST 240
Query: 213 QKDSPFIQT---------IYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
F T ++D+GG+D D + G K I+LN +S +GG + N++
Sbjct: 241 SYRDHFTATHASDALIFCVWDAGGNDTFDFS---GYKQNQMINLNELCFSDVGGLKGNVS 297
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IA IE+ +G SG+D +IGN NN+ + G+D G+ G +TF Y
Sbjct: 298 IAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRY 345
>gi|51598104|ref|YP_072295.1| metalloprotease [Yersinia pseudotuberculosis IP 32953]
gi|51591386|emb|CAH23052.1| metalloprotease [Yersinia pseudotuberculosis IP 32953]
Length = 445
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
++ NP A+ A+ W+ V +++F E S S + N GY P S
Sbjct: 80 VSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGS 139
Query: 97 RYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ IN+ D R G G + HEIGHALGL H + +G Y
Sbjct: 140 FSPIWINYSFSDNQHPSRLNYGGGVLT-----HEIGHALGLGHSHAPHG----------Y 184
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY QDS + Y +TP + DI A+Q +YGA G+ +Y
Sbjct: 185 TQQ---MSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNST 241
Query: 213 QKDSPFIQT---------IYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
F T ++D+GG+D D + G K I+LN +S +GG + N++
Sbjct: 242 SYRDHFTATHASDALIFCVWDAGGNDTFDFS---GYKQNQMINLNELCFSDVGGLKGNVS 298
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IA IE+ +G SG+D +IGN NN+ + G+D G+ G +TF Y
Sbjct: 299 IAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRY 346
>gi|730411|sp|Q07162|PRTG_ERWCH RecName: Full=Secreted protease G; Short=ProG; Flags: Precursor
gi|297861|emb|CAA50501.1| protease G [Erwinia chrysanthemi]
Length = 475
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 167/382 (43%), Gaps = 60/382 (15%)
Query: 5 KPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSF-----------DITELNPNAQ 52
KP YT E+ D + R W+ + K LT L + N
Sbjct: 41 KPSYTLEQARDQITRGNITWNGEKVFGKSAALTYSFLQSVADSDMPDNFKGFVKFNAAQI 100
Query: 53 EVARWALGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCTPR----YDSRYF------- 99
+ + AL W+ V ++TF E + I+F Y TP +S+ F
Sbjct: 101 QQTKLALQSWADVANVTFSEAKDGERATIQF----GNYTLTPDGNTDNNSQAFGFYPGNW 156
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNAL-HEIGHALGLMHPGSYNG--GYPVYGVDN 151
N+++AD R I + N L HEIGH LGL HPG Y+ G P Y D
Sbjct: 157 KWAGSAWFNYNQADNQRPDINE---FGRNTLTHEIGHTLGLYHPGDYDASDGNPGY-KDV 212
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y D+ S+MSY+ + D + A P DI A+QK+YGA + G+ +Y
Sbjct: 213 TYAEDTRQFSIMSYWNEGYTGGDFHGYHAAAPH--DIAAIQKLYGANMSTRTGDTVYGFH 270
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+P I +++D+GG+D D + I L + ++S +GG + ++
Sbjct: 271 SNSGRDFYTATDSKTPLIFSVWDAGGNDTFDFSGYS-ANQRISLISGTFSDVGGLKAMVS 329
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA VIE+ +G SG+DV++GN ++N +GNDV G G D A ++ +Y +
Sbjct: 330 IAAGAVIENAIGGSGHDVIVGNLSDNRIDGGAGNDVLYGDGGADILTGGAGKDIF-VYAW 388
Query: 322 ENAIIVYDANEHKQDFLSDVER 343
E D+ D ++D +R
Sbjct: 389 EK-----DSLSSAPDTITDFQR 405
>gi|170022379|ref|YP_001718884.1| serralysin [Yersinia pseudotuberculosis YPIII]
gi|169748913|gb|ACA66431.1| Serralysin [Yersinia pseudotuberculosis YPIII]
Length = 444
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
++ NP A+ A+ W+ V +++F E S S + N GY P S
Sbjct: 79 VSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNPGS 138
Query: 97 RYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ IN+ D R G G + HEIGHALGL H + +G Y
Sbjct: 139 FSPIWINYSFSDNQHPSRLNYGGGVLT-----HEIGHALGLGHSHAPHG----------Y 183
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY QDS + Y +TP + DI A+Q +YGA G+ +Y
Sbjct: 184 TQQ---MSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNST 240
Query: 213 QKDSPFIQT---------IYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
F T ++D+GG+D D + G K I+LN +S +GG + N++
Sbjct: 241 SYRDHFTATHASDALIFCVWDAGGNDTFDFS---GYKQNQMINLNELCFSDVGGLKGNVS 297
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IA IE+ +G SG+D +IGN NN+ + G+D G+ G +TF Y
Sbjct: 298 IAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRY 345
>gi|260577026|ref|ZP_05845006.1| Serralysin [Rhodobacter sp. SW2]
gi|259020782|gb|EEW24098.1| Serralysin [Rhodobacter sp. SW2]
Length = 841
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 44/340 (12%)
Query: 7 VYTTERIADHLLR--DQYWSNYFIRYKP----DVLTTHRLSFDITELNPNAQEVARWALG 60
V T + +A L ++Y+S P D+ ++S+++T L +A+ AL
Sbjct: 142 VLTADEVAWQLTNNFERYFSGAGSANIPATAYDLSGGRQISYNVTGLTAPGAALAQQALQ 201
Query: 61 EWSKVVDLTFEETSIHSDIKF------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
WS V +TF++TS + I F + + N V +P + + W
Sbjct: 202 MWSDVTGITFQQTSGAAQITFQNDSVDVEAFNSNVTSPD---GTIISSTLQVSTGWLTTF 258
Query: 115 GKGTILSHNA---LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY------ 165
G T+ S++ +HE+GH+LGL H G+YNG YGVDN Y NDS S+MSY
Sbjct: 259 GT-TMDSYSFETYVHELGHSLGLGHGGNYNG-SATYGVDNYYLNDSPHLSIMSYMQAVND 316
Query: 166 -FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP------------KGSLGNNIYKIEVQ 212
F ++ ++A F Y TPM++DI+A++ +YG + GN V
Sbjct: 317 EFDDANTFVNAQFRYVLTPMIADILAMRNLYGLSTTTRTGNTTYGYNSNTGNAALDAAVT 376
Query: 213 QKDSP----FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
D T++D+GG D ++L+ G + IDLN + S + G NM IA TV+
Sbjct: 377 LNDPANNNYVAFTVFDNGGTDTINLSGYSGSQ-RIDLNQGASSDVLGGRLNMGIAYGTVV 435
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
E+ +G S D + GNSA N GND +G++G+DT
Sbjct: 436 ENAIGGSAADSMTGNSAANSLSGLGGNDTLNGNTGVDTLI 475
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+N+T+ I + G++ N+V+ GNSANNV GND +G++G DT
Sbjct: 515 ENLTLTGAAAINAY-GNALNNVITGNSANNVLSGGGGNDTLNGTTGTDTMI 564
>gi|257485399|ref|ZP_05639440.1| serralysin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 214
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 100/181 (55%), Gaps = 24/181 (13%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF------ 177
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ +S D +F
Sbjct: 33 HEIGHTLGLSHPGDYNAGEGNPTY-KDASYAEDTRGYSVMSYW--SESNTDQNFVKGGVA 89
Query: 178 GYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGG 227
Y + P++ DI AVQ++YGA + G+ +Y S + +++D GG
Sbjct: 90 AYSSAPLLDDIAAVQQLYGANMSTRAGDTVYGFNSTAGRDFYSATSASSKVVFSVWDGGG 149
Query: 228 DDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D LD + G +N I+LN S+S +GG N++IA+ V+E+ VG SGND++IGN+A
Sbjct: 150 KDTLDFS--GFTQNQKINLNAASFSDVGGMVGNVSIAKGVVVENAVGGSGNDLLIGNAAA 207
Query: 287 N 287
N
Sbjct: 208 N 208
>gi|197106755|ref|YP_002132132.1| alkaline metalloproteinase [Phenylobacterium zucineum HLK1]
gi|196480175|gb|ACG79703.1| alkaline metalloproteinase [Phenylobacterium zucineum HLK1]
Length = 551
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 129/289 (44%), Gaps = 37/289 (12%)
Query: 50 NAQEVAR--WALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS--------RYF 99
NA ++A+ AL WS V ++ F + + S+N + Y F
Sbjct: 92 NAAQIAQTELALQAWSDVANIRFVRSGFGLSGEGAYSDNAQMLFSNYSGGQDGASAFATF 151
Query: 100 MEINFDKADVW-------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGV 149
+ DVW G +H +HEIGHA+GLMHPG Y+ +
Sbjct: 152 PGRSAAAGDVWINITARDNSAPASGNYGAHVLVHEIGHAIGLMHPGDYDADATSNFTWSQ 211
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG--YCATPMVSDIVAVQKIYGAPKGSL--GNN 205
+Y DS +VMSYF +S AS+G Y ATP + DI A Q YG P + G+
Sbjct: 212 HAEYFEDSRQYTVMSYF--SESNTGASYGLRYPATPQLDDIAAAQIEYG-PNWTTRTGDT 268
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+Y E S + ++D+GG D LD + G IDL +S++GG
Sbjct: 269 VYGFNSTAERPWFEAGSASSRVVFAVWDAGGTDTLDFSGYG-QNQLIDLREGFFSNVGGL 327
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N+ IA+ VIE+ G SG D++ GN+ N F G D +G +G D
Sbjct: 328 TGNVAIAKGAVIENARGGSGGDLINGNAQANALFGGVGGDTLNGEAGQD 376
>gi|296532125|ref|ZP_06894892.1| metallophosphoesterase [Roseomonas cervicalis ATCC 49957]
gi|296267549|gb|EFH13407.1| metallophosphoesterase [Roseomonas cervicalis ATCC 49957]
Length = 2039
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 160/365 (43%), Gaps = 67/365 (18%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+ G V+G + ++V SGN + DG +G DT Y++ R ++
Sbjct: 1710 VVRLEAAPGGVRQVLGGAGDDVLQAGSGNVLVDGGAGHDTVVLTGGIGGYQMLRSGAELL 1769
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKH 385
+ A+ L ++E +RFAD ++ + L Y + D++ + H
Sbjct: 1770 LSAADGAVT--LRNIEAVRFADGLVELAHANTLFDPLHYMRANADVLA----SGMTAEAH 1823
Query: 386 FYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAA----RHYITHGVKEGRNPDA 439
+ ++G EGRD F + YL + D+ AA +HY+ HG EGR+P A
Sbjct: 1824 YDQYGWREGRDPNAVFSTGGYLSANGDVE--------AAGLNPLQHYLQHGAAEGRDPSA 1875
Query: 440 -FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT----------FDSYLY 488
F A Y+A + D+ A A +H+ N+G EGR FD+ Y
Sbjct: 1876 QFDAQFYLARNADVARAGLGA-------LEHYLNYGMAEGRVTGPAIGQRVEAGFDAEYY 1928
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLV 547
L + D+ RG H++ HG EGRNP+A F Y+A++ D+ A D
Sbjct: 1929 LLANADVGAAGVDARG----HWLQHGQVEGRNPNAYFDTRFYLAANTDVAAAGMDP---- 1980
Query: 548 QAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAA-----QHYITHGMK 600
+H+S FG++EGR S F+ YL D+ AAA +HY+T G
Sbjct: 1981 ---LEHYSRFGWQEGRQPSAAFDAGAYLRINPDV---------AAAGVNPLEHYLTFGHL 2028
Query: 601 EGRAL 605
EGR L
Sbjct: 2029 EGRVL 2033
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 506 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR- 563
A HY +G +EGR+P+A F Y++++ D+ A + H+ G EGR
Sbjct: 1820 AEAHYDQYGWREGRDPNAVFSTGGYLSANGDVEAAGLNP-------LQHYLQHGAAEGRD 1872
Query: 564 -SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
S F+ YL D+ A +HY+ +GM EGR G
Sbjct: 1873 PSAQFDAQFYLARNADVARA----GLGALEHYLNYGMAEGRVTG 1912
>gi|108809791|ref|YP_653707.1| metalloprotease [Yersinia pestis Antiqua]
gi|108813781|ref|YP_649548.1| metalloprotease [Yersinia pestis Nepal516]
gi|145600589|ref|YP_001164665.1| metalloprotease [Yersinia pestis Pestoides F]
gi|270488101|ref|ZP_06205175.1| hypothetical protein YPD27_1615 [Yersinia pestis KIM D27]
gi|108777429|gb|ABG19948.1| metalloprotease [Yersinia pestis Nepal516]
gi|108781704|gb|ABG15762.1| metalloprotease [Yersinia pestis Antiqua]
gi|145212285|gb|ABP41692.1| metalloprotease [Yersinia pestis Pestoides F]
gi|262367608|gb|ACY64165.1| metalloprotease [Yersinia pestis D182038]
gi|270336605|gb|EFA47382.1| hypothetical protein YPD27_1615 [Yersinia pestis KIM D27]
Length = 442
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 133/288 (46%), Gaps = 43/288 (14%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIKFI-----SSNNGYVCTPRYDS 96
I+ NP A+ A+ W+ V +++F E S S +I F+ S+ GY P S
Sbjct: 77 ISLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPSNVAGYAYYPNPGS 136
Query: 97 RYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ IN+ D R G G + HEIGHALGL H + +G Y
Sbjct: 137 FSPIWINYSFSDNQHPSRLNDGGGVLT-----HEIGHALGLGHSHAPHG----------Y 181
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY Q S + Y +TP + DI A+Q +YGA G+ +Y
Sbjct: 182 TQQ---MSVMSYLSEQGSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNST 238
Query: 213 QKDSPFIQT---------IYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
F T ++D+GG+D D + G K I+LN +S +GG + N++
Sbjct: 239 SYRDHFTATHASDALIFCVWDAGGNDTFDFS---GYKQNQMINLNELCFSDVGGLKGNVS 295
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IA IE+ +G SG+D +IGN NN+ + G+D G+ G +TF Y
Sbjct: 296 IAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRY 343
>gi|162419360|ref|YP_001608372.1| metalloprotease [Yersinia pestis Angola]
gi|165926981|ref|ZP_02222813.1| metalloprotease [Yersinia pestis biovar Orientalis str. F1991016]
gi|165936949|ref|ZP_02225515.1| metalloprotease [Yersinia pestis biovar Orientalis str. IP275]
gi|166009505|ref|ZP_02230403.1| metalloprotease [Yersinia pestis biovar Antiqua str. E1979001]
gi|167400502|ref|ZP_02306011.1| metalloprotease [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420863|ref|ZP_02312616.1| metalloprotease [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167426616|ref|ZP_02318369.1| metalloprotease [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167468060|ref|ZP_02332764.1| metalloprotease [Yersinia pestis FV-1]
gi|294504302|ref|YP_003568364.1| metalloprotease [Yersinia pestis Z176003]
gi|162352175|gb|ABX86123.1| metalloprotease [Yersinia pestis Angola]
gi|165915191|gb|EDR33802.1| metalloprotease [Yersinia pestis biovar Orientalis str. IP275]
gi|165921087|gb|EDR38311.1| metalloprotease [Yersinia pestis biovar Orientalis str. F1991016]
gi|165991427|gb|EDR43728.1| metalloprotease [Yersinia pestis biovar Antiqua str. E1979001]
gi|166960992|gb|EDR57013.1| metalloprotease [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167049870|gb|EDR61278.1| metalloprotease [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054391|gb|EDR64207.1| metalloprotease [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|262363677|gb|ACY60398.1| metalloprotease [Yersinia pestis D106004]
gi|294354761|gb|ADE65102.1| metalloprotease [Yersinia pestis Z176003]
Length = 444
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 133/288 (46%), Gaps = 43/288 (14%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIKFI-----SSNNGYVCTPRYDS 96
I+ NP A+ A+ W+ V +++F E S S +I F+ S+ GY P S
Sbjct: 79 ISLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPSNVAGYAYYPNPGS 138
Query: 97 RYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ IN+ D R G G + HEIGHALGL H + +G Y
Sbjct: 139 FSPIWINYSFSDNQHPSRLNDGGGVLT-----HEIGHALGLGHSHAPHG----------Y 183
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY Q S + Y +TP + DI A+Q +YGA G+ +Y
Sbjct: 184 TQQ---MSVMSYLSEQGSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNST 240
Query: 213 QKDSPFIQT---------IYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
F T ++D+GG+D D + G K I+LN +S +GG + N++
Sbjct: 241 SYRDHFTATHASDALIFCVWDAGGNDTFDFS---GYKQNQMINLNELCFSDVGGLKGNVS 297
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IA IE+ +G SG+D +IGN NN+ + G+D G+ G +TF Y
Sbjct: 298 IAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRY 345
>gi|22127728|ref|NP_671151.1| metalloprotease [Yersinia pestis KIM 10]
gi|45443084|ref|NP_994623.1| metalloprotease [Yersinia pestis biovar Microtus str. 91001]
gi|150261071|ref|ZP_01917799.1| metalloprotease [Yersinia pestis CA88-4125]
gi|218930968|ref|YP_002348843.1| metalloprotease [Yersinia pestis CO92]
gi|229836449|ref|ZP_04456616.1| metalloprotease [Yersinia pestis Pestoides A]
gi|229839671|ref|ZP_04459830.1| metalloprotease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841754|ref|ZP_04461910.1| metalloprotease [Yersinia pestis biovar Orientalis str. India 195]
gi|229904292|ref|ZP_04519403.1| metalloprotease [Yersinia pestis Nepal516]
gi|21960850|gb|AAM87402.1|AE013989_9 putative secreted metalloprotease [Yersinia pestis KIM 10]
gi|45437951|gb|AAS63500.1| metalloprotease [Yersinia pestis biovar Microtus str. 91001]
gi|115349579|emb|CAL22553.1| metalloprotease [Yersinia pestis CO92]
gi|149290479|gb|EDM40556.1| metalloprotease [Yersinia pestis CA88-4125]
gi|229678410|gb|EEO74515.1| metalloprotease [Yersinia pestis Nepal516]
gi|229691093|gb|EEO83146.1| metalloprotease [Yersinia pestis biovar Orientalis str. India 195]
gi|229696037|gb|EEO86084.1| metalloprotease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229706517|gb|EEO92524.1| metalloprotease [Yersinia pestis Pestoides A]
gi|320017299|gb|ADW00871.1| metalloprotease [Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 445
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 133/288 (46%), Gaps = 43/288 (14%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIKFI-----SSNNGYVCTPRYDS 96
I+ NP A+ A+ W+ V +++F E S S +I F+ S+ GY P S
Sbjct: 80 ISLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPSNVAGYAYYPNPGS 139
Query: 97 RYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ IN+ D R G G + HEIGHALGL H + +G Y
Sbjct: 140 FSPIWINYSFSDNQHPSRLNDGGGVLT-----HEIGHALGLGHSHAPHG----------Y 184
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY Q S + Y +TP + DI A+Q +YGA G+ +Y
Sbjct: 185 TQQ---MSVMSYLSEQGSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNST 241
Query: 213 QKDSPFIQT---------IYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
F T ++D+GG+D D + G K I+LN +S +GG + N++
Sbjct: 242 SYRDHFTATHASDALIFCVWDAGGNDTFDFS---GYKQNQMINLNELCFSDVGGLKGNVS 298
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IA IE+ +G SG+D +IGN NN+ + G+D G+ G +TF Y
Sbjct: 299 IAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRY 346
>gi|255263135|ref|ZP_05342477.1| serralysin [Thalassiobium sp. R2A62]
gi|255105470|gb|EET48144.1| serralysin [Thalassiobium sp. R2A62]
Length = 365
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 101/189 (53%), Gaps = 17/189 (8%)
Query: 125 LHEIGHALGLMHPGSYNGG--YPVY-GVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYC 180
+HEIGHALGL H G YNG Y + G D + NDS+ SVMSYF +++ +DA+F Y
Sbjct: 78 IHEIGHALGLGHAGPYNGSADYTQFEGGDAAFINDSWQMSVMSYFSQTENTFIDATFAYV 137
Query: 181 ATPMVSDIVAVQKIYGAPK-----------GSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
TPM++DI A+ ++Y GS Y V +P T+ D GG D
Sbjct: 138 VTPMLADIQAIHQLYNTSGNIRDTDTIYGVGSTAGGYYD-TVLGLANPVTFTVVDDGGVD 196
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+D+++ G I+LN S SSI G NM+I T IE+VV SG+DVV N N
Sbjct: 197 TIDVSVFG-SDQMINLNGNSISSIAGNVGNMSIMDGTEIENVVMGSGDDVVYANDVGNDN 255
Query: 290 FESSGNDVF 298
+ +G D+
Sbjct: 256 YGGAGTDIV 264
>gi|254413957|ref|ZP_05027725.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179093|gb|EDX74089.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 665
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 134/301 (44%), Gaps = 54/301 (17%)
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFIS-SNNGYVCTPRYDSRYFMEINF--DKADVW 110
+ R A+ +W V ++ F +++F S G + + +Y+ +++ ++ DK +
Sbjct: 1 MVREAINQWKYVANIDFHRVDKGGNLRFSGESGKGGLASYKYNRKWWNPFSWGSDKLNHV 60
Query: 111 RYGIGK------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+GK G A+HEIGHALGL HPG+YNG Y D+ +VMS
Sbjct: 61 NIKLGKQSENGIGARFLDVAIHEIGHALGLKHPGNYNGDKKGKSPFLSYSQDNNTNTVMS 120
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV-----------QQ 213
Y + Y ATPM DI AVQ +YGA + GN YK +
Sbjct: 121 Y--------NDVGSYAATPMPYDIRAVQYLYGARSFNSGNTTYKFSSVNSYWDGSRHRGR 172
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNT------------------------ 247
+ P ++DS G D +L+ +G +N +ID+N
Sbjct: 173 SNKPMKLAVWDSAGVDTFNLSKLGYSRNGYHIDINQGGIITYQDEYNQRTYKAQDNSKDR 232
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ W + + TIA IE+VVGSS +D +IGNS+ NV G+D G+S DT
Sbjct: 233 KDWETHKTSPRGTTIAYGARIENVVGSSSDDKIIGNSSANVLRGGRGDDDIKGNSNNDTL 292
Query: 308 F 308
+
Sbjct: 293 Y 293
>gi|197284189|ref|YP_002150061.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681676|emb|CAR40761.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 654
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 104/206 (50%), Gaps = 25/206 (12%)
Query: 117 GTILSHNALHEIGHALGLMHPGSY--NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G+ + H +HE+GH+LGL H Y N + V DS SVMSY P + D
Sbjct: 280 GSFVYHTFIHELGHSLGLFHIWEYILNEKHKVL--------DSIKYSVMSYKCPD--IKD 329
Query: 175 ASFG--YCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE---------VQQKDSPFIQTI 222
A FG Y T M+ DI+ +Q +YG + L NN Y + + + I
Sbjct: 330 ADFGGLYPMTFMLVDILLLQYLYGENMTTRLENNTYGFNSNTGRAAYSLNSIEDKLVSCI 389
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D+GG D LD +L V I+LN +S IGG N++IA T+IE+ +G G+D +IG
Sbjct: 390 WDAGGIDTLDFSLYT-VNQVINLNEGCFSDIGGLRSNISIAYKTIIENAIGGKGDDTLIG 448
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFF 308
N +N GND+F G G D F+
Sbjct: 449 NPFDNNLIGGDGNDLFYGGDGNDLFY 474
>gi|260436045|ref|ZP_05790015.1| glycosyl hydrolase, BNR repeat [Synechococcus sp. WH 8109]
gi|260413919|gb|EEX07215.1| glycosyl hydrolase, BNR repeat [Synechococcus sp. WH 8109]
Length = 1782
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 120/254 (47%), Gaps = 40/254 (15%)
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD-SMMDASFGYC 180
LHEIGHALGL H G+YN Y D D+ NDS+ +S+MSYF D + +DAS Y
Sbjct: 168 QTTLHEIGHALGLGHLGNYNFSAN-YSYDADFINDSWQSSMMSYFDQTDNTSIDASKVYL 226
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGN-----NIYKIEVQQKDSPFIQ-------------TI 222
+TPMV+D +A+ +YG + N IY + ++ + TI
Sbjct: 227 STPMVADWIALDDLYGQYGFGINNAFTEDTIYGFDTNIGETTSLVFNKLKDLIPTTAYTI 286
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTES-------WSSIGGYEKNMTIAQHTVIESVVGSS 275
D GG D LDL+ + IDL S+IGG N++ A T IESV+G S
Sbjct: 287 VDGGGSDTLDLSGFAATQ-LIDLRPSDKYATNIYASNIGGKIGNLSFAPGTFIESVIGGS 345
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY---DANE 332
G D GN+ANN FDG G DT + Y +I+V D +
Sbjct: 346 GADTFRGNNANN---------NFDGRDGDDTALFNGELSDYSFNLDGQSIVVSDLRDGSP 396
Query: 333 HKQDFLSDVERLRF 346
QD L+++E + F
Sbjct: 397 DGQDTLTNIENIDF 410
>gi|166213401|ref|ZP_02239436.1| metalloprotease [Yersinia pestis biovar Antiqua str. B42003004]
gi|166205342|gb|EDR49822.1| metalloprotease [Yersinia pestis biovar Antiqua str. B42003004]
Length = 444
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIKFI-----SSNNGYVCTPRYDS 96
I+ NP A+ A+ W+ V +++F E S S +I F+ S+ GY P S
Sbjct: 79 ISLFNPAQIHQAKIAMQSWADVANISFTEASADSSANILFLNFQRPSNVAGYAYYPNPGS 138
Query: 97 RYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ IN+ D R G G + HEIGHALGL H + +G Y
Sbjct: 139 FSPIWINYSFSDNQHPSRLNDGGGVLT-----HEIGHALGLGHSHAPHG----------Y 183
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY Q S + Y +TP + DI A+Q +YGA G+ +Y
Sbjct: 184 TQQ---MSVMSYLSEQGSGANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNST 240
Query: 213 QKDSPFIQT---------IYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT 261
F T ++D+GG+D D + G K I+LN +S +GG + N++
Sbjct: 241 SYRDHFTATHASDALIFCVWDAGGNDTFDFS---GYKQNQMINLNELCFSDVGGLKGNVS 297
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IA IE+ + SG+D +IGN NN+ + G+D G+ G +TF Y
Sbjct: 298 IAADVTIENAISGSGHDDIIGNHTNNILTGNGGSDQLWGNGGNNTFRY 345
>gi|146309556|ref|YP_001190021.1| serralysin [Pseudomonas mendocina ymp]
gi|145577757|gb|ABP87289.1| Serralysin [Pseudomonas mendocina ymp]
Length = 1134
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 160/345 (46%), Gaps = 71/345 (20%)
Query: 6 PVYTTERIADHLLRDQYWSNY--FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
PV T A+ + QY ++Y F+ Y T S I L+ N + R AL +WS
Sbjct: 37 PVTLTYSFANPGVS-QYSTDYDDFVEY----WTGSNSSNFIYSLSSNQESAVRSALAQWS 91
Query: 64 KVVDLTFEETS-----IHSDIKFISSNNGYVCTPRYDSRYFMEINFDK---ADVWRYGIG 115
V +L+F E S D++F GY +D+ F + DVW +
Sbjct: 92 SVANLSFTEVSDTAGGTVGDLRF----GGYKLID-WDTAAFAFLPGASPLAGDVWIGPVT 146
Query: 116 KGTILSHNA------LHEIGHALGLMHP----GSYNGGYPVYGVDNDYENDSFLTSVMSY 165
S + LHEIGHALGL HP GS N Y + G +D +VMSY
Sbjct: 147 NEVNPSGGSYDYLTFLHEIGHALGLKHPFEASGSSN--YVLRGAYDDVR-----YTVMSY 199
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F+P PM+ DI A+Q IYG+ G+N+Y + +
Sbjct: 200 NDTYDFLPTG------------PMLYDIAAMQYIYGSNDTWQTGDNVYSWDANAR---IF 244
Query: 220 QTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIG--------GYEKN--MTIAQHTVI 268
+TI+D+GG+D +D + GV I+LN+ +SSIG G +N +TIA +VI
Sbjct: 245 ETIWDAGGNDTIDASNQSAGV--VINLNSGEFSSIGQSIYNYATGAGRNNFLTIAYGSVI 302
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
E+ +GS D +IGNSA+NV G DV G +G DT++ P+
Sbjct: 303 ENAIGSDYKDTLIGNSADNVLDGGKGEDVLRGGAGNDTYYVDLPT 347
>gi|332706690|ref|ZP_08426751.1| matrixin family protein [Lyngbya majuscula 3L]
gi|332354574|gb|EGJ34053.1| matrixin family protein [Lyngbya majuscula 3L]
Length = 1099
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 159/360 (44%), Gaps = 88/360 (24%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLT------THRLSFDITELNPNAQEVARWALGEWSKVVDL 68
D LL D YW + KP LT T D++E + + R AL WS+V ++
Sbjct: 12 DALLDDDYWVD---TGKPVSLTYSINYSTGSDGLDLSE-----RSMVREALTRWSEVANI 63
Query: 69 TFEETSIHSDIKFISSNNGY--VCTPRYDSRYFMEINF--DKADVWRYGIGKGTILSHN- 123
TF E S +++F S +G V + + +++ ++ DK D +GK +
Sbjct: 64 TFREVSNKGNLRF-SGQSGISGVASQKNARKWWKPRSWRSDKLDHVNIKLGKDSATGRGH 122
Query: 124 -----ALHEIGHALGLMHPGSYN-----GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
ALHEIGHALGL HPG YN G P Y D+ +VMSY D
Sbjct: 123 RFLDVALHEIGHALGLKHPGDYNGDTGKGSSPFL----PYYKDNNTNTVMSYNDVGD--- 175
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE----------VQQKDS---PFIQ 220
Y ATPM DI AVQ IYG+ + GN Y+ + + ++ S P
Sbjct: 176 -----YAATPMPYDIRAVQYIYGSNNFNSGNTYYRFDSVNGYSYDNGLARRGSEKLPMKL 230
Query: 221 TIYDSGGDDLLDLTLIGGV--------KNYIDL---------------------NTESWS 251
+I+DSGG D LD + +G V Y D+ NT + S
Sbjct: 231 SIWDSGGVDTLDFSKLGPVIFNISRSSGYYFDIRGGGILTSQHAYKSITYQPIDNTNNTS 290
Query: 252 SIGGYEK---NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S+ Y+ +IA VIE+V+GS +D +IGN + N +GND G+ G D+ F
Sbjct: 291 SL-RYKTTRYGTSIAYGVVIENVIGSLTSDTIIGNFSANHLKGGNGNDSLYGNGGSDSLF 349
>gi|78185015|ref|YP_377450.1| metalloprotease [Synechococcus sp. CC9902]
gi|78169309|gb|ABB26406.1| metalloprotease [Synechococcus sp. CC9902]
Length = 513
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 43/249 (17%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDY-----------------ENDSFLTSVMSYFM 167
LHEI HALGL HP + P + + +Y +++ + S ++ F
Sbjct: 235 LHEILHALGLEHPDNPKRVTPKFARNREYTLMADEFSHRAEFTQYFKDNGEIASSLAEFG 294
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+ D +G +TPM DI +Q +YGA K GN IYK PF +TI+D+
Sbjct: 295 RSEIRKD--YGVSSTPMTWDIAGLQYLYGANTKFQQGNTIYKYS---NTIPFYETIWDAS 349
Query: 227 GDDLLDLT---------LIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
G D ++L+ L GG + + D+ ++WS N+ IA +TVIE+ +G S
Sbjct: 350 GIDTINLSNFKKDLVVNLNGGQLSTLSFDVADQNWSD--KQHGNLGIAFNTVIENGIGGS 407
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND +IGNSANN ++GND G G+D + ++K+ + + I+ Q
Sbjct: 408 GNDSIIGNSANNTLKGNAGNDTLSGKDGIDVLIGGSGQDIFKLQQGKGHAII-------Q 460
Query: 336 DFLSDVERL 344
DF S ++++
Sbjct: 461 DFNSGIDKI 469
>gi|238787699|ref|ZP_04631496.1| Metalloprotease [Yersinia frederiksenii ATCC 33641]
gi|238724042|gb|EEQ15685.1| Metalloprotease [Yersinia frederiksenii ATCC 33641]
Length = 416
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 128/287 (44%), Gaps = 42/287 (14%)
Query: 50 NAQEV--ARWALGEWSKVVDLTFEETSIHSDIKFI--------SSNNGYVCTPRYDSRYF 99
N Q++ A+ A+ + V ++ F + S + I N GY P D+
Sbjct: 54 NRQQIRQAKIAMQSCADVANIQFIQASHNHSANLIFLNYGQPDGKNVGYAYYPSPDNFSP 113
Query: 100 MEINFDKADVWRYGIGKGTILSHNA---LHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ NF ++ I T+++ +HEIGHALGL H NG
Sbjct: 114 VWTNFAVSN-----ISSPTVINFGGYAFIHEIGHALGLGHSHGPNG-------------H 155
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKD 215
+ SVMSY QDS D S Y +TP + DI A+Q +YG + GN Y
Sbjct: 156 TQQVSVMSYLSEQDSGADYSGNYPSTPQMLDIAALQYLYGTNISTRTGNTTYGFNSNSNR 215
Query: 216 SPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
F I ++D+GG D D + +N I+LN S+S+IGG N++IA
Sbjct: 216 PYFTAYKARDVLIFCVWDAGGIDTFDFSGYWQNQN-INLNEGSFSNIGGLIGNVSIATGV 274
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
IE+ +G SGND + GNS NN G D G G +TF YY S
Sbjct: 275 CIENAIGGSGNDNIWGNSENNRIAGGLGADQLWGGGGSNTFVYYRVS 321
>gi|238797053|ref|ZP_04640556.1| Metalloprotease [Yersinia mollaretii ATCC 43969]
gi|238719098|gb|EEQ10911.1| Metalloprotease [Yersinia mollaretii ATCC 43969]
Length = 433
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 160/358 (44%), Gaps = 51/358 (14%)
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKF-------ISSNNGYVCTPRYDSRYFMEINFD-- 105
A+ ++ W+ + +++F E ++ S +G+ P Y + IN
Sbjct: 81 AKKSMQAWADIANISFTEAVDFDNVNIGFYNFSEKSIRSGFAFHPNYSRFSGVYINHSFG 140
Query: 106 ---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
K YG G L+H EIGH+LGL HP +N G + + ++ S+
Sbjct: 141 ENTKPTKSNYG---GFTLTH----EIGHSLGLKHP--HNAGDTIKDQKHTHQ-----VSI 186
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK------D 215
MSY+ S D +TP + D+ AVQ +YGA K G+ IY + +
Sbjct: 187 MSYYSESSSNADYCDDNVSTPQLYDVAAVQYLYGANMKTRTGDTIYGFNSNSERDFFTAN 246
Query: 216 SP---FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+P I ++D+GG D D + +N I+L S+S +GG N++IA VIE+ +
Sbjct: 247 APTDKLIFCVWDAGGMDTFDFSGYSEDQN-INLKELSFSDVGGLTANISIAADVVIENAI 305
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G SGND + GN ANN+ +G D G +G + F Y PS I +A ++D N
Sbjct: 306 GGSGNDTLYGNDANNILSGGAGADQLWGINGHNVFRYDKPSDSTSI----SADTIHDFNA 361
Query: 333 HK-----QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-----LIQVIGQDVF 380
K FLS + Q D ++ ++++ S +I++IG+ F
Sbjct: 362 EKDKIDLSPFLSGNRNIPLIVQNYDDISEITSLMIDFGISNRQYECNMMIKLIGKHQF 419
>gi|167648839|ref|YP_001686502.1| serralysin [Caulobacter sp. K31]
gi|167351269|gb|ABZ74004.1| Serralysin [Caulobacter sp. K31]
Length = 727
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 139/343 (40%), Gaps = 80/343 (23%)
Query: 42 FDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFM 100
F E + AR A+ W ++ T E++ +DI F + Y P + ++
Sbjct: 118 FGFAEFTEPQKAAAREAMASWDDLIAPTLVESAPEVADITFAN----YTNRPGTQAYAYL 173
Query: 101 EINFDK-------ADVW-------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
++ DVW + + +G H HE GHALGL HPG YN V
Sbjct: 174 PYDYTPDNADLIAGDVWVSANQPSNFQLDEGLYGIHTLTHESGHALGLEHPGDYNAAPGV 233
Query: 147 ---YGVDNDYENDSFLTSVMSYFMPQDSMMD------ASFGYCATPMVSDIVAVQKIYGA 197
Y + +Y DS S+MSYF ++ ++ Y +TP+V DI A+Q IYGA
Sbjct: 234 TITYADNAEYYQDSRAYSIMSYFAASETGARHFDFNISTTVYASTPLVHDIAAIQAIYGA 293
Query: 198 PKGS-LGNNIYKIEVQ--------QKDSPFIQTIYDSGGDDLLD---------------- 232
+ G+ Y K + I+D+GG+D LD
Sbjct: 294 DMTTRTGDTTYGFNSNAGRDSYDFTKTPAPVMAIWDAGGNDTLDASGYHTDQIIDLTPGS 353
Query: 233 LTLIGGV-----------------KNYIDLNTESWSS----------IGGYEKNMTIAQH 265
L+ IGGV Y + +++S +G N+ IA
Sbjct: 354 LSSIGGVTYDTAPSFEQVNANRAAAGYAPVALATYTSNMALLASNPVVGRLTDNVAIAYG 413
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+ +G SG+D +IGN+ N ++GND DG +G D +
Sbjct: 414 ATIENGIGGSGSDRLIGNAVGNTLTGNAGNDTLDGKAGADILY 456
>gi|119486279|ref|ZP_01620338.1| hypothetical protein L8106_16534 [Lyngbya sp. PCC 8106]
gi|119456492|gb|EAW37622.1| hypothetical protein L8106_16534 [Lyngbya sp. PCC 8106]
Length = 507
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
G FV FD YL S DL VFG D AA +HY+ G+ E R D F + Y+AS++DLI
Sbjct: 383 GDFV-FDPAQYLASNLDLAGVFGFDLAAANQHYLQFGINENRPVDTFDEVRYLASNQDLI 441
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
F P+ +H+ FG EGRS +FNP YL + DL FG+D AA QHY+
Sbjct: 442 GVFGFNPEFA---TEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLDAATQHYVQ 498
Query: 597 HGMKEGR 603
G EGR
Sbjct: 499 FGFSEGR 505
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D FD YL S DL VFG D AA +HY+ G+ E R D F + Y+AS++DLI
Sbjct: 384 DFVFDPAQYLASNLDLAGVFGFDLAAANQHYLQFGINENRPVDTFDEVRYLASNQDLIGV 443
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
F P+ +H+ FG EGR +F+ YL + DL+ FG+D AA +HY+ G
Sbjct: 444 FGFNPEFA---TEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLDAATQHYVQFG 500
Query: 515 VKEGR 519
EGR
Sbjct: 501 FSEGR 505
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGA 421
+Y AS DL V G D+ + +H+ +FG++E R + TFD YL S DL VFG +
Sbjct: 391 QYLASNLDLAGVFGFDLAAANQHYLQFGINENRPVDTFDEVRYLASNQDLIGVFGFNPEF 450
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
A HY+ G EGR+ ++F + Y+ ++ DL F + D H+ FG EGR V
Sbjct: 451 ATEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLD---AATQHYVQFGFSEGRIV 507
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDLRNV 498
F +Y+AS+ DL F DL + H+ FG E R V TFD YL S DL V
Sbjct: 387 FDPAQYLASNLDLAGVFGF--DLAAANQ-HYLQFGINENRPVDTFDEVRYLASNQDLIGV 443
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
FG + A HY+ G EGR+ ++F + Y+ ++ DL F + D A H+ FG
Sbjct: 444 FGFNPEFATEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLD---AATQHYVQFG 500
Query: 559 YEEGRSI 565
+ EGR +
Sbjct: 501 FSEGRIV 507
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRG 420
+ Y AS +DLI V G + + +H+ FG +EGR +F+ YL + DL+ FG+D
Sbjct: 431 VRYLASNQDLIGVFGFNPEFATEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLD 490
Query: 421 AAARHYITHGVKEGR 435
AA +HY+ G EGR
Sbjct: 491 AATQHYVQFGFSEGR 505
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSYDDLWNV 582
F +Y+AS+ DL F DL A + H+ FG E R + TF+ YL S DL V
Sbjct: 387 FDPAQYLASNLDLAGVFGF--DLAAANQ-HYLQFGINENRPVDTFDEVRYLASNQDLIGV 443
Query: 583 FGSDRSAAAQHYITHGMKEGRA 604
FG + A +HY+ G EGR+
Sbjct: 444 FGFNPEFATEHYVRFGAAEGRS 465
>gi|254470269|ref|ZP_05083673.1| hypothetical protein PJE062_4814 [Pseudovibrio sp. JE062]
gi|211960580|gb|EEA95776.1| hypothetical protein PJE062_4814 [Pseudovibrio sp. JE062]
Length = 1364
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-MMDASFGYC 180
H LHEIGHALGL H G YNG P Y + NDS SVMSY + + AS Y
Sbjct: 86 HTVLHEIGHALGLGHQGPYNGARPNYPNGVRFLNDSRHVSVMSYLAQEKNYTSGASNAYP 145
Query: 181 ATPMVSDIVAVQKIYGAPK------GS----LGNNIYKIEVQQKDSPFIQ---------- 220
T +D++A+ KIYG G+ LG+ +Y D +
Sbjct: 146 QTFAAADLLALDKIYGDQSYNGKTFGTHNAFLGDTVYGFNTNISDENNFRMVNLAKYGDN 205
Query: 221 ---TIYDSGGDDLLDLTLIGGVKNYIDLNTESW-------SSIGGYEKNMTIAQHTVIES 270
T+ D GG+D LDL+ G K IDL SS+ G KN++IA TVIE+
Sbjct: 206 NSYTLVDGGGNDTLDLS--GFRKATIDLRVTQADDTMPYSSSVDGERKNISIAVGTVIEN 263
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
VG+ GND + GN A+N + GN+ G G D F+ A +
Sbjct: 264 AVGTRGNDKITGNHADNHLWGGRGNNKMYGLEGDDHFYLEAGN 306
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 258 KNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+N I Q ++ IE+V SSG D V GN A+N+ +G D +G +G D+ +
Sbjct: 951 RNTGIGQASITGIENVTTSSGRDRVTGNDADNIIKTHAGEDTLNGGAGNDSLW 1003
>gi|46241703|gb|AAS83088.1| putative protease-like protein [Azospirillum brasilense]
Length = 589
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 148/347 (42%), Gaps = 58/347 (16%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHS----DIKFISSN---NGYVCTPRYD- 95
+ L+ A+ R AL W+ V ++T E + ++ D++F SN Y P D
Sbjct: 69 VWTLSGTARAAIRQALNTWTAVANITCTEVADNALSCGDLRFGGSNAPATAYTVLPVADI 128
Query: 96 ----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV--YGV 149
+F + D + W G+ +HEIGHA GL H G +P+ G+
Sbjct: 129 PEAGDVWFGPLFADPSLSWA----SGSYTYQTIVHEIGHAFGLKHLHEEYGAFPIAPTGI 184
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG-------YCATPMVSDIVAVQKIYGAPKGS- 201
D S L S MSY S A G + TPMV DI A+Q +YGA +
Sbjct: 185 D------SQLYSTMSY----RSYPGAPPGMGYWQDRFPTTPMVDDIAAIQYLYGANMSTN 234
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GY 256
G+ +Y + Q +TI+D GG+D + IDL S+S +G G+
Sbjct: 235 AGDTVYSWQPGQA---IFETIWDGGGNDTISWANQT-TDARIDLRPGSYSDLGPAWRAGF 290
Query: 257 ---EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---------ESSGNDVFDGSSGL 304
+ + IA IE+ +G SGND++IGN +N + +GN++ DG G+
Sbjct: 291 YMESRTLGIAYDCWIENAIGGSGNDILIGNERDNALYGGAGDDTLIGGAGNNLLDGGDGV 350
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
DT + Y I R A V + L +E L F D +
Sbjct: 351 DTAVFEGAPTSYTI-RHSGAGEVTVDGPQGTNTLRSIEHLSFGDMTL 396
>gi|209966405|ref|YP_002299320.1| Alkaline Protease, putative [Rhodospirillum centenum SW]
gi|209959871|gb|ACJ00508.1| Alkaline Protease, putative [Rhodospirillum centenum SW]
Length = 674
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 177/406 (43%), Gaps = 64/406 (15%)
Query: 5 KPVYTTERIADHLLRD-QYWSNY-------FIRYKP-DVLTTHRLSFDITELNPNAQEVA 55
K ++ T+ IADHL+R W+ FI ++P + + + + + + +E A
Sbjct: 213 KAIWDTDTIADHLIRTGTAWAAPGGVVRYGFIDHRPAEGYSPNGEAEGFSPFSAAQREAA 272
Query: 56 RWALGEWSKVVDLTFEETSIH--SDIKFISSNNG------YVCTPRYDSRYFMEINFDKA 107
R A W V+ + F E + I+F ++ G Y R + + +N D+A
Sbjct: 273 RQAAALWDDVLAIRFVEDTRPDGGQIRFANTTTGPGQAWAYFPDARAAAGGDVWVNPDQA 332
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMS 164
+ G +HE+GHALGL HPG Y+ G Y +Y DS S+MS
Sbjct: 333 S--NLELAPGYYGLTTLVHEMGHALGLSHPGDYDAGDDGEISYAASAEYFQDSRQYSIMS 390
Query: 165 YFMPQDS------MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI---YKIEVQQKD 215
Y+ + + D F Y A+PM+ DI A Q++YGA + + + + D
Sbjct: 391 YWDARLTGADHVDWWDLRFVYAASPMLHDIAAAQRLYGADRTTRTGDTTYGFNASADLAD 450
Query: 216 SPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG----------- 255
P + ++D+GG D LD + + +DL ++SS GG
Sbjct: 451 RPSFDFTRNTQPVVALWDAGGTDTLDFSGFD-TPSVLDLRQGAFSSGGGRADVPADYAAQ 509
Query: 256 ----YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++N+ IA TVIE+ VG SG+D+VIGN N +G D G+ G DT
Sbjct: 510 GDSLLKQNIAIAFGTVIENAVGGSGDDLVIGNEVANRLDGGAGADTLVGAQGRDTLVGGG 569
Query: 312 PSYLYKI-------YRFENAIIVYDANEHKQDFLS-DVERLRFADQ 349
L+++ R + I+ +D + + D + D + R DQ
Sbjct: 570 GDDLFRLVRSGDSPVRAPDVIVDFDQGDDRIDLSAMDADLHRAGDQ 615
>gi|3493595|gb|AAC33448.1| ZapE [Proteus mirabilis]
Length = 687
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
LHE+GHALGL H Y + D ++ S SVM Y +P D Y T M
Sbjct: 288 LHEVGHALGLNHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTSEHADFGGLYPMTFM 342
Query: 185 VSDIVAVQKIYGAPKGS-LGNNIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLT 234
+ DI+ +Q +YG + L NNIY ++ + + I+DSGG D LD +
Sbjct: 343 LLDILLLQYLYGPNMTTRLENNIYGFHSNTGRAAYSLKSIEDKLVSCIWDSGGIDTLDFS 402
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L V I+LN +S IGG N++IA T+IE+ +G SG+D +IGNSANN G
Sbjct: 403 LYT-VNQVINLNEGCFSDIGGLRSNISIAYKTIIENAIGGSGHDTIIGNSANNELLGGDG 461
Query: 295 NDVFDGSSGLDTFF 308
ND DG G D +
Sbjct: 462 NDTIDGGLGNDHLY 475
>gi|254559808|ref|YP_003066903.1| Alkaline phosphatase [Methylobacterium extorquens DM4]
gi|254267086|emb|CAX22902.1| putative Alkaline phosphatase; Hemolysin-type calcium-binding domain
[Methylobacterium extorquens DM4]
Length = 1058
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 170/377 (45%), Gaps = 70/377 (18%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I T + +VG +GND++ G S ++ F +GNDV +G +GLD + S +
Sbjct: 707 IVGGTAKDFLVGGAGNDMLAGGSGDDTFIGGAGNDVINGGAGLDRVIFNFASSAASVGLS 766
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE---YTASYEDLIQVIGQD 378
+ + +E F +E+ F+D+ I+ N +++ Y S +D++ G+D
Sbjct: 767 ASGVTTITGSEGTDAFRG-IEQFTFSDRTIN--NADASPLVDDVFYLLSNKDVL-ASGKD 822
Query: 379 VFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGR 435
+ HF E+G EGRD F + YL + D+ + GA Y G KEGR
Sbjct: 823 ADD---HFAEYGAREGRDPNAYFSTKGYLAANSDV-----AQSGANPLTQYAQAGWKEGR 874
Query: 436 NPDA-FKALEYIASHEDL----INAFADAPDLVQVGKDHFSNFGCEEGRFV--------- 481
+P A F Y+A + D+ +N A H+ +G EGR
Sbjct: 875 DPSATFDNEFYLARNPDVKAAGLNPLA-----------HYIEYGQSEGRTTFAAVGRTAD 923
Query: 482 ---TFDSYLYLGSYDDLRNV---FGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASH 533
FD+ YL + D+ +V G D A AR H+ +G KEGR+P+A F Y+A++
Sbjct: 924 IKGGFDAEYYLLANGDVASVATAAGGDTFAFARQHFDNYGWKEGRDPNAIFDTKGYLAAY 983
Query: 534 EDLINAFADAPDLVQAGKD---HFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRS 588
D+ QAG + H+ +G++EGR + F+ YL + D+
Sbjct: 984 T----------DVAQAGVNPLGHYDTYGWKEGRDPATDFDTSAYLQANPDVAQA----GI 1029
Query: 589 AAAQHYITHGMKEGRAL 605
QH++ G+ E RA+
Sbjct: 1030 EPMQHFLQFGLVENRAV 1046
>gi|197284190|ref|YP_002150062.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681677|emb|CAR40763.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 654
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT---SVMSYFMPQDSMMDASFG--Y 179
+HE+GHALGLMH Y + +ND LT SVM+Y + DA F Y
Sbjct: 288 IHELGHALGLMHINVY---------LKNIKNDVILTYKYSVMAYQFAD--IKDADFAGLY 336
Query: 180 CATPMVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDD 229
T M+ DI+ +Q +YG + L NN Y + + + I+D+GG D
Sbjct: 337 PMTFMLVDILLLQYLYGPNMTTRLENNTYGFHSNTGRAAYSLNSIEDKLVSCIWDAGGID 396
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LD +L V I+LN +S IGG N++IA T+IE+ +G G+D +IGN +N
Sbjct: 397 TLDFSLYT-VNQVINLNEGCFSDIGGLRSNISIAYKTIIENAIGGKGDDTLIGNPFDNNL 455
Query: 290 FESSGNDVFDGSSGLDTFF 308
GND+F G G D F+
Sbjct: 456 IGGDGNDLFYGGDGNDLFY 474
>gi|197284188|ref|YP_002150060.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681675|emb|CAR40757.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 687
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 100/195 (51%), Gaps = 16/195 (8%)
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
LHE+GHALGL H Y + D ++ S SVM Y +P D Y T
Sbjct: 287 VLHEVGHALGLSHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTSEHADFGGLYPMTF 341
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDL 233
M+ DI+ +Q++YG + L NNIY ++ + + I+DSGG D LD
Sbjct: 342 MLLDILLLQQLYGENMTTRLENNIYGFHSNTGRVAYSLKSIEDKLVSCIWDSGGIDTLDF 401
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L V I+LN S+S IGG N++IA T+IE+ +G SG+D +IGNSANN
Sbjct: 402 SLYT-VNQVINLNEGSFSDIGGLRSNISIAYKTIIENAIGGSGHDTIIGNSANNELIGGD 460
Query: 294 GNDVFDGSSGLDTFF 308
GND G G D +
Sbjct: 461 GNDTIKGGLGNDHLY 475
>gi|67922217|ref|ZP_00515731.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Crocosphaera watsonii WH 8501]
gi|67855920|gb|EAM51165.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Crocosphaera watsonii WH 8501]
Length = 670
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 159/352 (45%), Gaps = 64/352 (18%)
Query: 45 TELNPNAQEVARW---ALGEWSKVVDLTFEET----------------SIHSDIKFISSN 85
T L P +++ ++ AL +S + ++ F+E + +D +S
Sbjct: 273 TLLQPFSEDTTKFIVDALKLYSDIANIQFQEVDETANGGEGGTLNFGYAFLTDQMGMSDA 332
Query: 86 NGYVCTPRYDSRYFMEINFDK--ADVW----RYGIGKGTILSHNALHEIGHALGLMHPGS 139
G TP + NFDK D+W GT + +HEIGHALGL HP
Sbjct: 333 AGLAYTPSSLLEFPYSPNFDKKIGDIWIDRNETNFKPGTDVFFTIIHEIGHALGLEHPHE 392
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+ G + G ++YE ++MSY +S ++ + TP + D+ A+Q +YG
Sbjct: 393 TSDGDQIVGFKDNYE-----YTIMSY---NESKLNPGV-FPRTPQILDVAAIQYLYGVNN 443
Query: 200 GSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLD---------LTLIGGVKNYIDLNTES 249
+ G++IY E + F+QTI+D+GG+D + + L G N I LN ++
Sbjct: 444 NTRSGDDIYSWE---DNENFMQTIWDTGGNDTISAAKQSNEVTIDLAAGYAN-IGLNNKT 499
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD---- 305
+ N+ I + +IE++ G G+D +IGN+ +N + GND +G+ G D
Sbjct: 500 YKPA---RSNLQIPVNVIIENIKGGQGDDTLIGNNIDNRLEGNGGNDTLEGNGGNDFIDG 556
Query: 306 ------TFFYYAP-SYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFAD 348
F AP +Y Y++ I++ + + D L ++E L F D
Sbjct: 557 GEGEDTAIFSDAPQNYDYEVIDNNQIKIIHARGSESVQTDILINIENLNFLD 608
>gi|240138687|ref|YP_002963159.1| hypothetical protein MexAM1_META1p2085 [Methylobacterium extorquens
AM1]
gi|240008656|gb|ACS39882.1| hypothetical protein, putative 5'-nucleotidase domain
[Methylobacterium extorquens AM1]
Length = 2794
Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 99/365 (27%), Positives = 165/365 (45%), Gaps = 60/365 (16%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
H V++ G+ D + G + +++ S+GND G G DT + + + E
Sbjct: 2452 HDVLQ---GTPFADRLFGGAGDDIIVNSAGNDFLSGGRGNDTLVF--NTSFASVTVTEAG 2506
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI--LEYTASYEDLIQVIGQDVFES 382
+ +D +S ER F+D I VN Q + L Y + +D+ Q GQD +
Sbjct: 2507 SLTAITGPDGRDLVSGFERYLFSDATI-VVNDGQPLVDDLFYLSRNKDVFQA-GQD---A 2561
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 439
H+ ++G EGRD F + YL + ++R + HY G KEGR+P
Sbjct: 2562 DAHYAQYGAREGRDPNAFFSTKGYLAANPEVR----ASGANPLDHYEQAGWKEGRDPGVR 2617
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFV------------TFD 484
F Y+A++ PD+ G + H+ G EGR + FD
Sbjct: 2618 FDNEFYLAAN----------PDVKAAGLNPLAHYLAEGRAEGRAIHDAVGRSGDIRGGFD 2667
Query: 485 SYLYLGSYDDLRNVFGSDR--GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
+ YL ++ D+ G+ AARH+ +G +EGRNP+A F Y+A++ D+ A
Sbjct: 2668 AEYYLLAHADVAQAAGTTDTFAFAARHFEQYGWQEGRNPNAVFDTKGYLAAYGDVKAAGL 2727
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ H+ +G++EGR S F+ YL++Y D+ + + QH++ +G+
Sbjct: 2728 NP-------LTHYDQYGWKEGRDPSADFDSSTYLSTYTDV----AAAKIDPMQHFLQYGL 2776
Query: 600 KEGRA 604
EGR+
Sbjct: 2777 YEGRS 2781
>gi|163796443|ref|ZP_02190403.1| type I secretion target repeat protein [alpha proteobacterium
BAL199]
gi|159178293|gb|EDP62837.1| type I secretion target repeat protein [alpha proteobacterium
BAL199]
Length = 565
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D F Y Y+ SY D+ + + + A H I G EGR F LEY+AS+ DL+ A
Sbjct: 264 DPEFSGYEYVASYGDIESAYAGNPAGARSHLINSGAYEGREV-TFDGLEYVASYSDLMAA 322
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
H+ N G EGR TFD YL +Y DLR VFG++ AA RHYI+ G
Sbjct: 323 LGTD---RAAAATHYMNSGRYEGRSTTFDGESYLAAYADLRGVFGNNVAAATRHYISSGY 379
Query: 516 KEGRNP 521
EGR+P
Sbjct: 380 AEGRSP 385
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Query: 478 GRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
GR++ F Y Y+ SY D+ + + + A H I G EGR F LEY+AS+ D
Sbjct: 260 GRYLDPEFSGYEYVASYGDIESAYAGNPAGARSHLINSGAYEGREV-TFDGLEYVASYSD 318
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
L+ A A H+ N G EGRS TF+ + YL +Y DL VFG++ +AA +HYI
Sbjct: 319 LMAALGTD---RAAAATHYMNSGRYEGRSTTFDGESYLAAYADLRGVFGNNVAAATRHYI 375
Query: 596 THGMKEGRA 604
+ G EGR+
Sbjct: 376 SSGYAEGRS 384
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
F EY+AS+ D+ +A+A P + H N G EGR VTFD Y+ SY DL
Sbjct: 267 FSGYEYVASYGDIESAYAGNP---AGARSHLINSGAYEGREVTFDGLEYVASYSDLMAAL 323
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G+DR AAA HY+ G EGR+ F Y+A++ DL F + V A H+ + GY
Sbjct: 324 GTDRAAAATHYMNSGRYEGRS-TTFDGESYLAAYADLRGVFGNN---VAAATRHYISSGY 379
Query: 560 EEGRS 564
EGRS
Sbjct: 380 AEGRS 384
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
LEY ASY DL+ +G D + H+ G EGR TFD YL +Y DLR VFG++ A
Sbjct: 310 LEYVASYSDLMAALGTDRAAAATHYMNSGRYEGRSTTFDGESYLAAYADLRGVFGNNVAA 369
Query: 422 AARHYITHGVKEGRNP 437
A RHYI+ G EGR+P
Sbjct: 370 ATRHYISSGYAEGRSP 385
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
EY ASY D+ + + H G EGR++TFD Y+ SY DL G+DR AA
Sbjct: 271 EYVASYGDIESAYAGNPAGARSHLINSGAYEGREVTFDGLEYVASYSDLMAALGTDRAAA 330
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
A HY+ G EGR+ F Y+A++ DL F + V H+ + G EGR
Sbjct: 331 ATHYMNSGRYEGRS-TTFDGESYLAAYADLRGVFGNN---VAAATRHYISSGYAEGR 383
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF 583
F EY+AS+ D+ +A+A P + H N G EGR +TF+ Y+ SY DL
Sbjct: 267 FSGYEYVASYGDIESAYAGNP---AGARSHLINSGAYEGREVTFDGLEYVASYSDLMAAL 323
Query: 584 GSDRSAAAQHYITHGMKEGRALGISGMQF 612
G+DR+AAA HY+ G EGR+ G +
Sbjct: 324 GTDRAAAATHYMNSGRYEGRSTTFDGESY 352
>gi|227357936|ref|ZP_03842279.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
gi|227161845|gb|EEI46874.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
Length = 400
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 16/194 (8%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HE+GHALGL H Y + D ++ S SVM Y +P D Y T M
Sbjct: 1 MHEVGHALGLSHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTSEHADFGGLYPMTFM 55
Query: 185 VSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDLT 234
+ DI+ +Q++YG + L NNIY ++ + + I+DSGG D LD +
Sbjct: 56 LLDILLLQQLYGENMTTRLENNIYGFHSNTGRAAYSLKSIEDKLVSCIWDSGGIDTLDFS 115
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L V I+LN S+S IGG N++IA T+IE+ +G SG+D +IGNSANN G
Sbjct: 116 LYT-VNQVINLNEGSFSDIGGLRSNISIAYKTIIENAIGGSGHDTIIGNSANNELIGGDG 174
Query: 295 NDVFDGSSGLDTFF 308
ND G G D +
Sbjct: 175 NDTIKGGLGNDHLY 188
>gi|110598386|ref|ZP_01386659.1| VCBS [Chlorobium ferrooxidans DSM 13031]
gi|110339995|gb|EAT58497.1| VCBS [Chlorobium ferrooxidans DSM 13031]
Length = 1656
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 27/188 (14%)
Query: 125 LHEIGHALGLMHPGSY---NGGYPVYGVDNDYENDSFLTSVMSYF---MP-----QDSMM 173
+HEIGHALGL HPG Y NGG Y + + D+ +VMSYF +P D
Sbjct: 1143 IHEIGHALGLSHPGVYDAGNGGTITYQNNAAFAEDNRKYTVMSYFGGYLPGYGWYPDGTY 1202
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIY----KIEVQQKDSPF---------I 219
+SF + TPM+ DI A+Q ++GA + G+ IY + + P I
Sbjct: 1203 -SSFIFPQTPMLYDIAAIQALHGADTVTRTGDTIYGFNCNLASTDAERPIYDFTSNATPI 1261
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI+D+GG D +D + + I+LN ++SS+GG +N+ IA IE VG SGNDV
Sbjct: 1262 FTIWDAGGMDTIDCSGYT-TQQIINLNPGTYSSLGGMTENVAIAFDCTIERAVGGSGNDV 1320
Query: 280 VIGNSANN 287
+IG++A N
Sbjct: 1321 LIGSAALN 1328
>gi|110598202|ref|ZP_01386479.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
gi|110340216|gb|EAT58714.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
Length = 557
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 148/341 (43%), Gaps = 61/341 (17%)
Query: 58 ALGEWSKVVDLTFEETSIHSD------IKFISSNNGYVCTPRYDSRYFMEINFDKA-DVW 110
AL W+ V L F E + D + F S+ +GY + YF + + A DVW
Sbjct: 85 ALQTWADVALLNFTEVADDPDSVGDFRLAFSSAVDGY-----WGWCYFPDSTWASAGDVW 139
Query: 111 ---RYGIGK----GTILSHNALHEIGHALGLMHPGSYNGGYPV----YGVDNDYENDSFL 159
+ G G+ ++ +HE GH LGL HPG+Y+ G + DY N
Sbjct: 140 INPLFATGSSWTSGSFNYYSLIHETGHGLGLKHPGNYSEGSSSTEIYFPASLDYRN---- 195
Query: 160 TSVMSYFMPQDSMMDASFG-YCA----TPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ 213
SVMSY Q D S Y A TPMV DI A+Q +YG GN Y +
Sbjct: 196 YSVMSYNDFQTWFFDTSLQEYIAVVPETPMVYDIEAIQYLYGTNNNYRTGNTTYTFD--- 252
Query: 214 KDSPFIQTIYDSGGDDLLDLT---------LIGGVKNYID-LNTESWSSIGGYEKNMTIA 263
+PF ++I+DSGG D +D++ L G + + +NT + S + N+ IA
Sbjct: 253 PATPFYKSIWDSGGTDTIDISNFSTDCTIDLTPGSYSTLHYINTGTRSDLYDGSNNLGIA 312
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYYAPSY 314
+E V G SGND + GN A N + SGN D+ +G G D Y
Sbjct: 313 FGVTLEMVNGGSGNDTIKGNRAGNSLYGGSGNDTVTGGAGDDILNGGDGTDKAVYSGNFS 372
Query: 315 LYKIYRFENAIIVY-----DANEHKQDFLSDVERLRFADQC 350
Y I ++ A Y A+ D +S E+ +FAD
Sbjct: 373 DYSI-SYDGATDTYTITDKSADRDGSDRVSGFEQFQFADAV 412
>gi|325981485|ref|YP_004293887.1| peptidase M10A and M12B matrixin and adamalysin [Nitrosomonas sp.
AL212]
gi|325531004|gb|ADZ25725.1| peptidase M10A and M12B matrixin and adamalysin [Nitrosomonas sp.
AL212]
Length = 511
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 140/327 (42%), Gaps = 54/327 (16%)
Query: 58 ALGEWSKVVDLTF----EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG 113
AL +W+ V +L F E S DI+ + + T + Y + D+W
Sbjct: 82 ALQQWANVANLNFVQVAETASEVGDIRAAYTEDPDESTLAW--TYLPSPSTLAGDIWINT 139
Query: 114 IG--------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
G G+I LHE+GHALGL HP + G+ D +N + ++MSY
Sbjct: 140 KGLLRFQDWNPGSISFETILHELGHALGLEHPFADPNDPSKVGLPRDLDNTRY--TIMSY 197
Query: 166 F---MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE----VQQKDSPF 218
+ D + SF + TPMV DI A+Q +YG+ NN Y + +
Sbjct: 198 TYSNLEGDEGTEFSF-HPTTPMVLDISAIQFLYGS------NNFYHAVNDTYTFDDANTY 250
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-------------SIGGYEKNMTIAQH 265
+TI+D+GG L G + + IDLN S S +IG N+ IA +
Sbjct: 251 HETIWDAGGSSDT-LWYAGAIPSLIDLNPASASQIGKPVYVQSNGVNIGSPIHNIWIADN 309
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA- 324
IE+ +G GND IGN+A+N DG G DT P + + + +
Sbjct: 310 VTIENAIGGQGNDTFIGNNASN---------SLDGGGGTDTVVIGFPRHQFTLGKSSGHY 360
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCI 351
I D N QD L ++ER+ F D +
Sbjct: 361 FIAADTNPANQDILLNIERVEFDDTGL 387
>gi|197284192|ref|YP_002150064.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681679|emb|CAR40769.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 649
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 21/196 (10%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG--YCAT 182
LHE+GHALGL H +Y ++ ++ +VM M + DA FG Y T
Sbjct: 283 LHELGHALGLEHIDAYLKNIKNSAIE------TYKYTVMG--MGFADIKDADFGGLYPMT 334
Query: 183 PMVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLD 232
M+ DI+ +Q +YG + L NN Y ++ + + I+D+GG D LD
Sbjct: 335 FMLVDILLLQYLYGPNMTTRLENNTYGFNSNTGRAAYSLKSIEDKLVSCIWDAGGIDTLD 394
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+L V I+LN +S IGG N++IA T+IE+ +G G+D +IGN +N
Sbjct: 395 FSLYT-VNQVINLNEGCFSDIGGLRSNISIAYKTIIENAIGGKGDDTLIGNPFDNNLIGG 453
Query: 293 SGNDVFDGSSGLDTFF 308
GND+F G G D F+
Sbjct: 454 DGNDLFYGGDGNDLFY 469
>gi|238751201|ref|ZP_04612696.1| Metalloprotease [Yersinia rohdei ATCC 43380]
gi|238710679|gb|EEQ02902.1| Metalloprotease [Yersinia rohdei ATCC 43380]
Length = 448
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 128/291 (43%), Gaps = 50/291 (17%)
Query: 50 NAQEV--ARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTPRYDSRYF 99
N Q++ A+ A+ + ++ F ETS + + N GY P
Sbjct: 86 NQQQIRQAKLAMQSCADAANIHFMETSQDNPANLLFLNYEQQDVTIAGYAYYPGQGDFSP 145
Query: 100 MEINFDKADVWRYGIGKGTILSHNAL---HEIGHALGLMH---PGSYNGGYPVYGVDNDY 153
+ INF D T S++AL HE+GH LGL H P SY
Sbjct: 146 LWINFAHCDA-----ANPTQTSYSALILTHELGHTLGLKHTHNPDSY------------- 187
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYK---- 208
+ SVMSY Q S D + +TP + DI A+Q +YGA P LGN Y
Sbjct: 188 ---TQQVSVMSYLSEQSSDADYLGHHPSTPQMLDIAALQYLYGANPHTRLGNTTYGFNSN 244
Query: 209 -----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTI 262
+ I ++D+GG D D + G +N I+LN S+S +GG + N++I
Sbjct: 245 SSREYLTANNASDILIFCVWDAGGIDTFDFS--GYKQNQTINLNQLSFSDVGGLKGNISI 302
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
A +IE+ +G G+D + GN A+N G D G+ G +TF Y + S
Sbjct: 303 AADVIIENAIGGDGDDNIKGNKADNRLTGGGGADQLWGNQGYNTFVYQSVS 353
>gi|254561286|ref|YP_003068381.1| hypothetical protein METDI2865 [Methylobacterium extorquens DM4]
gi|254268564|emb|CAX24521.1| hypothetical protein, putative 5'-nucleotidase domain
[Methylobacterium extorquens DM4]
Length = 2796
Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 98/365 (26%), Positives = 164/365 (44%), Gaps = 60/365 (16%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
H V++ G+ D + G + +++ S+G+DV G G DT + + + E
Sbjct: 2454 HDVLQ---GTPFADRLFGGAGDDIIVNSAGDDVLSGGRGNDTLVF--NTSFASVTVTEAG 2508
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI--LEYTASYEDLIQVIGQDVFES 382
+ +D +S ER F+D I VN Q + L Y + +D+ Q GQD +
Sbjct: 2509 SLTAITGPDGRDLVSGFERYLFSDATI-VVNDGQPLVDDLFYLSRNKDVFQA-GQD---A 2563
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 439
H+ ++G EGRD F + YL + ++R + Y G KEGR+P
Sbjct: 2564 DAHYAQYGAREGRDPNAFFSTKGYLAANPEVR----ASGANPLDQYEQAGWKEGRDPGVR 2619
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFV------------TFD 484
F Y+A++ PD+ G + H+ G EGR + FD
Sbjct: 2620 FDNEFYLAAN----------PDVKAAGLNPLAHYLANGQAEGRAIHDAVGRSGDIRGGFD 2669
Query: 485 SYLYLGSYDDLRNVFGSDR--GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
+ YL ++ D+ G+ AARH+ +G +EGRNP+A F Y+A++ D+ A
Sbjct: 2670 AEYYLLAHADVAQAAGTTDTFAFAARHFEQYGWQEGRNPNAVFDTKGYLAAYGDVKAAGL 2729
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ H+ +G++EGR S F+ YL++Y D+ + + QH++ G+
Sbjct: 2730 NP-------LTHYDQYGWKEGRDPSAGFDSSTYLSTYTDV----AAAKIDPMQHFLQDGL 2778
Query: 600 KEGRA 604
EGR+
Sbjct: 2779 YEGRS 2783
>gi|254500110|ref|ZP_05112262.1| Matrixin family [Labrenzia alexandrii DFL-11]
gi|222441408|gb|EEE48086.1| Matrixin family [Labrenzia alexandrii DFL-11]
Length = 526
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 142/325 (43%), Gaps = 49/325 (15%)
Query: 58 ALGEWSKVVDLTFEETSIHSD---IKFISSNNGYV--CTPRYDSRYFMEINFDKADVWRY 112
A EW V +++FE T++ + ++ +++++ Y T D I + +
Sbjct: 60 AFAEWQAVANISFELTTVREEANILQVLTNSDQYAGQTTAPADGVNPPTIEYSVLNGQFD 119
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD-------NDYENDSFLTSVMSY 165
I G +HEIGHA+GL HP S G GV D E + + +VMSY
Sbjct: 120 YIQPGGDTYLTMVHEIGHAIGLYHPHS---GTTFPGVTLNADQDTGDNELNQQIWTVMSY 176
Query: 166 FM-----PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
+ P+ ++ +G + M DI AVQ +YGA G+N Y + +
Sbjct: 177 AVGWTGQPRTTL---DYGTGSGAMTFDIAAVQYLYGARAAETGDNTYALPTVNQTGIGWD 233
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLN----TESWSSIGGY-------EKNMTIAQHTVIE 269
I+D+GG D + G + +N T ++ GGY E TIA VIE
Sbjct: 234 AIWDTGGTDTISG---AGATTSLTINLTAATLEGANAGGYVSWVTGIEGGFTIANGVVIE 290
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY---RFENAII 326
+ +G SG+D + GNSANN +G +G D+ Y Y ++ + + ++
Sbjct: 291 NAIGGSGDDSITGNSANN---------AINGGAGTDSVIYTGDQSGYLVFTGSQGQTMVV 341
Query: 327 VYDANEHKQDFLSDVERLRFADQCI 351
+ +D L++VE L F Q +
Sbjct: 342 DLTPSRDGKDSLTNVENLTFNGQSV 366
>gi|113954849|ref|YP_730469.1| type I secretion target GGXGXDXXX repeat-containing protein
[Synechococcus sp. CC9311]
gi|113882200|gb|ABI47158.1| type I secretion target GGXGXDXXX repeat protein [Synechococcus sp.
CC9311]
Length = 619
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 142/345 (41%), Gaps = 77/345 (22%)
Query: 30 YKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--- 86
+ P ++ FD LNP QE+ R S +D+TF E + +D I N+
Sbjct: 162 HNPQQQFGNKNDFDGLSLNPERQELLRSVFKYLSNTLDITFIEDNTFTDFDNILENDINP 221
Query: 87 ----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
Y + R F IN D G+G +ALHEIGH
Sbjct: 222 YSEYDGYISFGDVNEVNYASKRQMLERRFCIINIDNTINPSGGVGSNAWT--DALHEIGH 279
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN-------------DSFLTSVMSYFMPQDSMMDAS- 176
ALGL HPGSYN Y D + EN D+ + ++MSYF P +++
Sbjct: 280 ALGLSHPGSYN-----YDPDPESENHNVTFERMAEFYNDTNMLTLMSYFKPNNNLGGLGS 334
Query: 177 ------FG---YCATPMVSDIVAVQKIYGAPKGS-----------LGNNIY--------- 207
FG AT M +D +A++ Y K + +G N
Sbjct: 335 LENPNIFGPHMKQATLMPADFIALRGRYEIQKNNAAHGDWNEKKIIGVNTTITNEDPIWN 394
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-------WSSIGGYEKNM 260
++E Q S + T + +D +D + IDL + WS+IGG +KN+
Sbjct: 395 QVESQISTSRYFYTQVANHNEDTVDFSNTT-EDQKIDLRVTTGDNYDAFWSNIGGNKKNL 453
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ ++ E SG+D++IGN+ANN F + G+D G G D
Sbjct: 454 AFSEVSIFEVAKSGSGDDILIGNNANNALFGNDGDDHLIGWGGDD 498
>gi|257092498|ref|YP_003166139.1| Serralysin [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257045022|gb|ACV34210.1| Serralysin [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 1598
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 154/358 (43%), Gaps = 70/358 (19%)
Query: 47 LNPNAQEVARWALGEWSKVV--DLTFEETSIHSDIKFISSNNGYVCT----PRYDSRYFM 100
LN Q A AL W ++ D+ T+ S+I+F +S G P S +F
Sbjct: 28 LNAQQQAQAERALQTWDDLIAPDM-VRTTATTSNIEFGTSTTGVSYAHAYFPTTGSVWFS 86
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
AD+ +G+ + +++ +HEIGHALGL H G YNG + YE DS +
Sbjct: 87 R---SYADLMSPQVGQHSFMAY--VHEIGHALGLDHMGDYNGSGSW--TPSSYE-DSGVY 138
Query: 161 SVMSYFMPQDSMMDASFGYCA---------------TPMVSDIVAVQKIYGAPKGS-LGN 204
SVMSYF P M++ G A TPMV+D++A+Q IYGA + G+
Sbjct: 139 SVMSYFGPN---MNSGSGQVAWADWVGADGKLYSPQTPMVNDVMAIQAIYGAETTTRTGD 195
Query: 205 NIYKI--EVQQKDSPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+Y V +P I TIYDS G D L+L+ I+L S+SS
Sbjct: 196 TVYGFGSNVTGAMAPIFDFTLNANPIVTIYDSAGIDTLNLSGWN-TACTINLAPGSYSSG 254
Query: 254 GGYEKNMTIAQHTVIESVVGSS------------------GNDVVIGNSANNVFFESSGN 295
N+ IA IE+ VG S GND + G ++V +G+
Sbjct: 255 NSMTYNIAIAYTCDIENAVGGSAGDQITGNLLANRLDGGAGNDTLSGGGGDDVLVAGAGD 314
Query: 296 DVFDGSSGLDTFFYYAP--SYLY---KIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
DV DG G D+ + +Y Y +Y A Y A D L +E FAD
Sbjct: 315 DVLDGGEGTDSVVFSGTWGAYSYTCTNLYATTFAFTFYGA-ATGTDTLRGIETFVFAD 371
>gi|115373620|ref|ZP_01460915.1| interstitial collagenase (Matrixmetalloproteinase-1) (MMP-1)
(Fibroblast collagenase) [Stigmatella aurantiaca
DW4/3-1]
gi|310824941|ref|YP_003957299.1| peptidase [Stigmatella aurantiaca DW4/3-1]
gi|115369323|gb|EAU68263.1| interstitial collagenase (Matrixmetalloproteinase-1) (MMP-1)
(Fibroblast collagenase) [Stigmatella aurantiaca
DW4/3-1]
gi|309398013|gb|ADO75472.1| Peptidase [Stigmatella aurantiaca DW4/3-1]
Length = 477
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAF 456
TFD+ YL + DL FG D+GAA+RH+I G EGR F +Y+A + DL AF
Sbjct: 309 TFDASFYLSLHSDLSAAFGGDQGAASRHWIDAGRNEGRMGAPTFDVRDYLARYPDLQAAF 368
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ V H+ G EGR V F + YL Y DLRN FG++ AA H++T G
Sbjct: 369 GNN---YPVAISHWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNNYRAAMEHFLTAG 425
Query: 515 VKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ EGR +P+ F Y+A++ D+ + + + G H+ G EGR
Sbjct: 426 LHEGRRGSPE-FDPAYYLAANPDVAAVYGA--NNFRGGLIHWLQAGRAEGR 473
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAF 540
TFD+ YL + DL FG D+GAA+RH+I G EGR F +Y+A + DL AF
Sbjct: 309 TFDASFYLSLHSDLSAAFGGDQGAASRHWIDAGRNEGRMGAPTFDVRDYLARYPDLQAAF 368
Query: 541 ADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ H+ G EGR S+ F+ YL Y DL N FG++ AA +H++T G
Sbjct: 369 GNN---YPVAISHWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNNYRAAMEHFLTAG 425
Query: 599 MKEGR 603
+ EGR
Sbjct: 426 LHEGR 430
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
Y + + DL G D + +H+ + G +EGR TFD YL Y DL+ FG++
Sbjct: 315 YLSLHSDLSAAFGGDQGAASRHWIDAGRNEGRMGAPTFDVRDYLARYPDLQAAFGNNYPV 374
Query: 422 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A H++ G+ EGR AF A Y+A + DL NAF + + +HF G EGR
Sbjct: 375 AISHWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNN---YRAAMEHFLTAGLHEGRR 431
Query: 481 VT--FDSYLYLGSYDDLRNVFGSD--RGAAARHYITHGVKEGR 519
+ FD YL + D+ V+G++ RG H++ G EGR
Sbjct: 432 GSPEFDPAYYLAANPDVAAVYGANNFRGGLI-HWLQAGRAEGR 473
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSD 418
+ +Y A Y DL G + ++ H+ + G++EGR + F + YL Y DLRN FG++
Sbjct: 354 VRDYLARYPDLQAAFGNNYPVAISHWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNN 413
Query: 419 RGAAARHYITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
AA H++T G+ EGR +P+ F Y+A++ D+ + + + G H+ G
Sbjct: 414 YRAAMEHFLTAGLHEGRRGSPE-FDPAYYLAANPDVAAVYGA--NNFRGGLIHWLQAGRA 470
Query: 477 EGR 479
EGR
Sbjct: 471 EGR 473
>gi|229588355|ref|YP_002870474.1| putative protease [Pseudomonas fluorescens SBW25]
gi|229360221|emb|CAY47078.1| putative protease [Pseudomonas fluorescens SBW25]
Length = 495
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 95/209 (45%), Gaps = 32/209 (15%)
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHP--GSYNGGYPVYGVDNDYENDSFLTSVMSY 165
D+WR N +HEIGH +GL HP S G P DY+ + S+MSY
Sbjct: 190 DIWR----------ENLIHEIGHIVGLSHPHGDSEEEGLP------DYQENWKNYSIMSY 233
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----------VQQK 214
P S + S G + M+ DI A+QK YGA + G+ Y
Sbjct: 234 NTPLFSEAEDSGGPVSL-MIDDIAALQKTYGANHATRAGDTTYGFNSNSGREHSSLTSSD 292
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
D P ++D GG D LD + I+LN S SS+GG +N+ IA+ VIE G
Sbjct: 293 DKPLF-AVWDGGGWDTLDFSGFS-QNQVINLNAGSLSSVGGLSRNVGIAEGAVIEEARGG 350
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSG 303
G +++IGN NV G DV G SG
Sbjct: 351 KGRNILIGNEVFNVLRGGPGEDVMYGGSG 379
>gi|254470859|ref|ZP_05084262.1| hypothetical protein PJE062_2767 [Pseudovibrio sp. JE062]
gi|211960001|gb|EEA95198.1| hypothetical protein PJE062_2767 [Pseudovibrio sp. JE062]
Length = 1398
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 110/226 (48%), Gaps = 37/226 (16%)
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGY 179
+ LHEIGHALGL H G YNG Y + + NDS+ S+MSYF Q+ D S+
Sbjct: 136 AQTVLHEIGHALGLGHQGHYNGSANFY-KNATFLNDSWQNSIMSYFDQNQNPTDDGSYAV 194
Query: 180 CATPMVSDIVAVQKIYG----------APKGSLGNNIY--KIEVQQKDSPFI-------- 219
+ +D++A+ K+YG LG+ +Y + D+ +
Sbjct: 195 PQSFKAADLLALDKLYGDQSYDGKTFGTKNAFLGDTVYGWNTNLSGHDNTRMVNLARYSD 254
Query: 220 QTIY---DSGGDDLLDLTLIGGVK--NYIDLN------TESW-SSIGGYEKNMTIAQHTV 267
Q Y D GG+D LD++ G + N IDL TE++ SSIG KN+ IA TV
Sbjct: 255 QNSYALVDGGGNDTLDMS---GSRYNNRIDLRVTQADATEAYTSSIGPKHKNIAIAVGTV 311
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
IE+ VG GND + GN A+N GND G G D F+ A +
Sbjct: 312 IENAVGGRGNDHITGNYADNHLLGGVGNDKMFGLEGDDHFYLEAGN 357
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN---------VFFESS 293
IDLN ES SS G ++ ++I E++ SGND +IGN A N + +
Sbjct: 379 IDLNRESLSSSFGQDRLISI------ENIDSGSGNDRIIGNDAANTLEGNDGDDTLYGNG 432
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GND+ G +G D + A + + ++ I D N+
Sbjct: 433 GNDILKGGNGNDKLYGGAGDDRFYLDAGDDVIQGGDGND 471
>gi|238623400|emb|CAS06694.1| alkaline metalloprotease [Pseudomonas tolaasii]
Length = 286
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 118/278 (42%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP +T ++ ADHLLRD + + K D+ T S +N NAQ
Sbjct: 13 NGKPSWTVDQAADHLLRDGASYKDVNHNGKIDLTYTFLTSATTATMNKHGISGFSQFNAQ 72
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V +++F E++ D +N GY T
Sbjct: 73 QKAQAVLAMQSWADVANVSFTESASGGDTHMTFANYSGGQAGAAAFAYLPGTGAGYDGTS 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVD 150
Y + +N DV YG HEIGH LGL HPG YN G P Y D
Sbjct: 133 WYLTNSSYTVN-KTPDVNNYG-------RQTLTHEIGHTLGLAHPGDYNAGTGNPTY-KD 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
DY D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 184 ADYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDT 243
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + +++D GG+D LD +
Sbjct: 244 TYGFNSNTGRDFYSATSNADKLVFSVWDGGGNDTLDFS 281
>gi|218530329|ref|YP_002421145.1| 5'-nucleotidase domain protein [Methylobacterium chloromethanicum
CM4]
gi|218522632|gb|ACK83217.1| 5'-Nucleotidase domain protein [Methylobacterium chloromethanicum
CM4]
Length = 2796
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 96/365 (26%), Positives = 163/365 (44%), Gaps = 60/365 (16%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
H V++ G+ D + G + +++ S+G+D G G DT + + + E
Sbjct: 2454 HDVLQ---GTPFADRLFGGAGDDIIVNSAGDDFLSGGRGNDTLVF--NTSFASVTVTEAG 2508
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI--LEYTASYEDLIQVIGQDVFES 382
+ +D +S ER F+D I VN + + L Y + +D+ Q GQD +
Sbjct: 2509 SLTAITGPDGRDLVSGFERYLFSDATI-VVNDGKPLVDDLFYLSRNKDVFQA-GQD---A 2563
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 439
H+ ++G EGRD F + YL + ++R + Y G KEGR+P
Sbjct: 2564 DAHYAQYGAREGRDPNAFFSTKGYLAANPEVR----ASGANPLDQYEQAGWKEGRDPGVR 2619
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFV------------TFD 484
F Y+A++ PD+ G + H+ G EGR + FD
Sbjct: 2620 FDNEFYLAAN----------PDVKAAGLNPLAHYLANGQAEGRAIHDAVGRSGDIRGGFD 2669
Query: 485 SYLYLGSYDDLRNVFGSDR--GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
+ YL ++ D+ G+ AARH+ +G +EGRNP+A F Y+A++ D+ A
Sbjct: 2670 AEHYLLAHADVAQAAGTTDTFAFAARHFEQYGWQEGRNPNAVFDTKGYLAAYGDVKAAGL 2729
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ H+ +G++EGR S F+ YL++Y D+ + + QH++ G+
Sbjct: 2730 NP-------LTHYEQYGWKEGRDPSAGFDSSTYLSTYTDV----AAAKIDPMQHFLQDGL 2778
Query: 600 KEGRA 604
EGR+
Sbjct: 2779 YEGRS 2783
>gi|238897624|ref|YP_002923303.1| putative metalloprotease, Serralysin and RTX domains [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465381|gb|ACQ67155.1| putative metalloprotease, Serralysin and RTX domains [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 540
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 30/194 (15%)
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HEIGHALGL H + Y N SVMSY+ + Y + P +
Sbjct: 164 HEIGHALGLRHSH----------ISKSYTNK---ISVMSYYKE----FQYNGYYPSGPQM 206
Query: 186 SDIVAVQKIYGAP-KGSLGNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTL 235
DI +VQ +YGA + +GN IY + + D P I ++D+GG D D +
Sbjct: 207 YDIASVQYLYGANLETRIGNTIYGFNSNSGRPYLSAENADDPLIFCVWDAGGIDTFDFS- 265
Query: 236 IGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G +N I+L + +S +GG + N++IA +IE+ + SG+D +IGN +NV G
Sbjct: 266 -GYRQNQRINLKSSQFSDVGGLKNNVSIAYRVIIENAISGSGDDEIIGNEVDNVLRGGKG 324
Query: 295 NDVFDGSSGLDTFF 308
D+ G G D F
Sbjct: 325 ADLIYGEQGCDRLF 338
>gi|289609587|emb|CBI60417.1| unnamed protein product [Sordaria macrospora]
Length = 111
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 394 GRD-ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
GRD + FD Y +Y DLR FG+D AA RHYI G EGR F AL Y A++ DL
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQ-FDALGYTAAYNDL 61
Query: 453 INAF-ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
AF AD V G H+ FG EGR VTFD+ YL S +L FG+DR
Sbjct: 62 RAAFGAD----VDAGAAHYIRFGAAEGRSVTFDAIGYLASNPELITDFGTDR 109
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ FD Y +Y DLR FG+D AA RHYI G EGR F AL Y A++ DL AF
Sbjct: 7 LAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQ-FDALGYTAAYNDLRAAF 65
Query: 541 -ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
AD V AG H+ FG EGRS+TF+ YL S +L FG+DR+
Sbjct: 66 GAD----VDAGAAHYIRFGAAEGRSVTFDAIGYLASNPELITDFGTDRT 110
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L YTA+Y DL Q G D + +H+ +G +EGR FD+ Y +Y+DLR FG+D A
Sbjct: 12 LTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQFDALGYTAAYNDLRAAFGADVDA 71
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
A HYI G EGR+ F A+ Y+AS+ +LI F
Sbjct: 72 GAAHYIRFGAAEGRSV-TFDAIGYLASNPELITDF 105
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR+P AF L Y A++ DL AF H+ +G EGR FD+ Y +Y+
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTDS---AAATRHYILWGKNEGRTAQFDALGYTAAYN 59
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
DLR FG+D A A HYI G EGR+ F A+ Y+AS+ +LI F
Sbjct: 60 DLRAAFGADVDAGAAHYIRFGAAEGRSV-TFDAIGYLASNPELITDF 105
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
GR+P AF L Y A++ DL AF A H+ +G EGR+ F+ Y +Y+
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTDS---AAATRHYILWGKNEGRTAQFDALGYTAAYN 59
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRAL 605
DL FG+D A A HYI G EGR++
Sbjct: 60 DLRAAFGADVDAGAAHYIRFGAAEGRSV 87
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
Q L YTA+Y DL G DV H+ FG +EGR +TFD+ YL S +L
Sbjct: 45 RTAQFDALGYTAAYNDLRAAFGADVDAGAAHYIRFGAAEGRSVTFDAIGYLASNPELITD 104
Query: 415 FGSDR 419
FG+DR
Sbjct: 105 FGTDR 109
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMN 617
+ F+P Y +Y DL FG+D +AA +HYI G EGR + + + N
Sbjct: 7 LAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQFDALGYTAAYN 59
>gi|238757396|ref|ZP_04618582.1| Metalloprotease [Yersinia aldovae ATCC 35236]
gi|238704435|gb|EEP96966.1| Metalloprotease [Yersinia aldovae ATCC 35236]
Length = 422
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 19/188 (10%)
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
H +HEI HA+GL H +D + SVMSYF Q S + + +
Sbjct: 144 HVIVHEILHAVGLKH-------------THDTAGLTQRESVMSYFSEQYSGANYGGHHVS 190
Query: 182 TPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
TP + DI A+Q +YGA + G++IY +P I I+D+GG D+LD +
Sbjct: 191 TPQLYDIAALQYLYGANMHTRTGHDIY---TYSHHTP-ILCIWDAGGTDMLDYS-DQNQD 245
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
I+L S+S++GG N++IA VIE+ +G SGND ++GN + NV G+D G
Sbjct: 246 QVINLTAGSFSNVGGLAGNVSIAYGVVIENAIGGSGNDELLGNESVNVLASGGGDDKLSG 305
Query: 301 SSGLDTFF 308
G D +
Sbjct: 306 GGGADQLW 313
>gi|85372717|gb|ABC70165.1| cold adapted lipase [Janthinobacterium sp. PI12]
Length = 260
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 22/167 (13%)
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI---------EVQ 212
MSY+ Q++ D Y + P++ DI A+QK+YGA + G+ +Y
Sbjct: 1 MSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSAT 60
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESV 271
S + +++D+GG+D LD + G +N I+LN ++ S +GG + N++IA +E+
Sbjct: 61 SSSSKLVFSVWDAGGNDTLDFS--GFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENA 118
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFY 309
+G SG+D++IGN NV +GND+ G +G DTF Y
Sbjct: 119 IGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFVY 165
>gi|213969839|ref|ZP_03397973.1| metalloprotease [Pseudomonas syringae pv. tomato T1]
gi|213925387|gb|EEB58948.1| metalloprotease [Pseudomonas syringae pv. tomato T1]
Length = 535
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 126/281 (44%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-- 115
WS V D+TF E DI+F SNN + + + Y DVW IG
Sbjct: 82 WSAVADITFTEVKDTPENVGDIRFGGSNN--LQSTEFGQAYTAGTEGRSGDVW---IGPK 136
Query: 116 -------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT LHE GHALGL HP + G Y +D +E+ + ++MSY
Sbjct: 137 VNAADPAKGTDDYLTFLHETGHALGLKHP--FEGTQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA GN++YK D +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANNSYHTGNDVYK---WAPDQSVFET 237
Query: 222 IYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 238 IWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN NV G D+ G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTY 336
>gi|301384997|ref|ZP_07233415.1| metalloprotease, putative [Pseudomonas syringae pv. tomato Max13]
Length = 535
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 126/281 (44%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-- 115
WS V D+TF E DI+F SNN + + + Y DVW IG
Sbjct: 82 WSAVADITFTEVKDTPENVGDIRFGGSNN--LQSTEFGQAYTAGTEGRSGDVW---IGPK 136
Query: 116 -------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT LHE GHALGL HP + G Y +D +E+ + ++MSY
Sbjct: 137 VNAADPAKGTDDYLTFLHETGHALGLKHP--FEGTQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA GN++YK D +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANNSYHTGNDVYK---WAPDQSVFET 237
Query: 222 IYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 238 IWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN NV G D+ G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTY 336
>gi|302133296|ref|ZP_07259286.1| metalloprotease, putative [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|331016597|gb|EGH96653.1| metalloprotease, putative [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 535
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 126/281 (44%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-- 115
WS V D+TF E DI+F SNN + + + Y DVW IG
Sbjct: 82 WSAVADITFTEVKDTPENVGDIRFGGSNN--LQSTEFGQAYTAGTEGRSGDVW---IGPK 136
Query: 116 -------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT +HE GHALGL HP + G Y +D +E+ + ++MSY
Sbjct: 137 VNAADPAKGTDDYLTFMHETGHALGLKHP--FEGTQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA GN++YK D +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANNSYHTGNDVYK---WAPDQSVFET 237
Query: 222 IYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 238 IWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN NV G D+ G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTY 336
>gi|28870362|ref|NP_792981.1| metalloprotease [Pseudomonas syringae pv. tomato str. DC3000]
gi|28853609|gb|AAO56676.1| metalloprotease, putative [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 535
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 126/281 (44%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-- 115
WS V D+TF E DI+F SNN + + + Y DVW IG
Sbjct: 82 WSAVADITFTEVKDTPENVGDIRFGGSNN--LQSTEFGQAYTAGTEGRSGDVW---IGPK 136
Query: 116 -------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT +HE GHALGL HP + G Y +D +E+ + ++MSY
Sbjct: 137 VNAADPAKGTDDYLTFMHETGHALGLKHP--FEGTQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA GN++YK D +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANNSYHTGNDVYK---WAPDQSVFET 237
Query: 222 IYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 238 IWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN NV G D+ G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTY 336
>gi|238623358|emb|CAS06673.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 281
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 112/270 (41%), Gaps = 41/270 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 10 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 69
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + H S++NG Y+ + +
Sbjct: 70 KEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESWY 129
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 130 LINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 186
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI---- 209
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 187 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTA 246
Query: 210 -----EVQQKDSPFIQTIYDSGGDDLLDLT 234
S I +++D GG+D LD +
Sbjct: 247 DRDFYSATSASSKLIFSVWDGGGNDTLDFS 276
>gi|255590871|ref|XP_002535385.1| conserved hypothetical protein [Ricinus communis]
gi|223523278|gb|EEF26996.1| conserved hypothetical protein [Ricinus communis]
Length = 413
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 184 MVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVK 240
MV+DI A+Q +YGA G+N Y + +PF+ TI+D+GG+D + + +G V
Sbjct: 1 MVNDIAAIQYLYGANTSYQTGSNTYTFD---PTTPFLHTIWDAGGNDTISIANFTVGSV- 56
Query: 241 NYIDLNTESWSSI--------GGY-------------EKNMTIAQHTVIESVVGSSGNDV 279
IDL +SS+ G N+ IA IE+ +G SGND
Sbjct: 57 --IDLQAGHYSSLRMAPEQSPAGIVWNTAPPATTYDGTNNLGIAYGVTIENAIGGSGNDT 114
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVYDANEHKQDFL 338
+IGN+ N + G + DG +G+DT Y Y + N I+ N + D L
Sbjct: 115 LIGNAVANHLQGNGGANTLDGGAGIDTAVYTGNFSSYALATNGNGYIVTLQNNPSQTDTL 174
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+++ERL FAD + ++NV + A Y L +
Sbjct: 175 TNIERLSFADASM-ALNVGSLAEDPLQAQYTALAE 208
>gi|254000477|ref|YP_003052540.1| Serralysin [Methylovorus sp. SIP3-4]
gi|253987156|gb|ACT52013.1| Serralysin [Methylovorus sp. SIP3-4]
Length = 559
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 142/293 (48%), Gaps = 36/293 (12%)
Query: 35 LTTHRLSFDITELNPNAQE--VARWALGEWSKVVDLTFE-ETSIHSDIKFISSNN----G 87
L ++ + L N+Q+ AR AL W LTF TS +DI +I +++ G
Sbjct: 27 LGKTTITVSLAGLTDNSQQEAAARHALEAWEDATGLTFTIVTSGSADI-YIGNDDALGEG 85
Query: 88 YVCTPRYDSRY------FMEINFDKADVWR---YGIGKGTILSHNALHEIGHALGLMHPG 138
D+RY +M+ F + W YG+ +HEIGH LGL H G
Sbjct: 86 AYAYEENDARYINVSENWMD-GFPADEQWSVGSYGV-------QTFIHEIGHTLGLGHGG 137
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
YNG Y D + D+ S+MSYF Q + AS + +PM++DI A++ +YG
Sbjct: 138 PYNGN-GSYAKDAIFALDTNQYSIMSYF-DQSNYGGASNLFLLSPMMADIAAIRLLYGNL 195
Query: 199 KGSLGNNIYKI--EVQQKDS------PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ G+ +Y + V S + +TI DS G D +D + + + ID+ +
Sbjct: 196 ATNTGDTLYGLGETVLGGTSDMGSYAGYARTISDSDGTDTMDFSNVS-RGSVIDMRAGGF 254
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
SSI GY+KN IAQ T IE++ + G D V GN A+N+ + SGND +G
Sbjct: 255 SSINGYKKNFAIAQDTTIENLNATLGRDTVTGNDADNLIYGLSGNDKISSGAG 307
>gi|119489451|ref|ZP_01622231.1| Peptidase M10A and M12B, matrixin and adamalysin [Lyngbya sp. PCC
8106]
gi|119454724|gb|EAW35870.1| Peptidase M10A and M12B, matrixin and adamalysin [Lyngbya sp. PCC
8106]
Length = 594
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 100/196 (51%), Gaps = 25/196 (12%)
Query: 125 LHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+HEIGHA+GL HPG+Y+ G D+ +VM+Y S +++S TP
Sbjct: 94 IHEIGHAVGLKHPGNYDSTGNLPPPPFLPSSEDNKQYTVMAYPAHPGSGVESS-----TP 148
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL---TLIGGV 239
M+ DI A+Q +YGA + GN+ Y ++ F++TI+D+GG D +D TL
Sbjct: 149 MLYDIAAIQYLYGANTTTRTGNDTYSW---NPNTAFVETIWDAGGIDTIDAGNQTL---- 201
Query: 240 KNYIDLNTESWSSIGG--------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
IDL ++SSIG N+ IA IE+ VG SG+D + GN+A+N
Sbjct: 202 DAAIDLTAGAFSSIGPRSNGSNTPASNNLAIAYDVTIENAVGGSGDDELRGNTASNDLQG 261
Query: 292 SSGNDVFDGSSGLDTF 307
G+D G G DT
Sbjct: 262 GGGDDYLFGDDGTDTL 277
>gi|238623356|emb|CAS06672.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 113/272 (41%), Gaps = 45/272 (16%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 12 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 71
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNGYVC-------TPRYDSRY 98
+E A+ +L W+ V +TF E + H S++NG + + +S Y
Sbjct: 72 KEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESWY 131
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYEND 156
+ +++ G+G HEIGH LGL HPG YN G P Y D Y D
Sbjct: 132 LINKDYEVNKT----PGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGED 186
Query: 157 SFLTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI-- 209
+ SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 187 TRAYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNS 246
Query: 210 -------EVQQKDSPFIQTIYDSGGDDLLDLT 234
S I +++D GG+D LD +
Sbjct: 247 TADRDFYSATSASSKLIFSVWDGGGNDTLDFS 278
>gi|238783933|ref|ZP_04627950.1| Metalloprotease [Yersinia bercovieri ATCC 43970]
gi|238715172|gb|EEQ07167.1| Metalloprotease [Yersinia bercovieri ATCC 43970]
Length = 441
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDN--DYENDSFLTSVMSYFMPQDSMMDASFG 178
+H HEIGH LGL H +G N + + + S+MSY Q S D
Sbjct: 152 AHILTHEIGHTLGLKH---------THGAKNWPEEQQHTQQVSIMSYQSEQASGADYGGN 202
Query: 179 YCATPMVSDIVAVQKIYGAPKGS-LGNNIYK---------IEVQQKDSPFIQTIYDSGGD 228
+TP + DI AVQ +YG + GN Y + I ++D+GG
Sbjct: 203 SLSTPQLYDIAAVQYLYGPNLTTRTGNTAYGFNSNSDRDFLTANTPTDKLIFCVWDAGGI 262
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D + +N I LN S+S +GG N++IA VIE+ +G SGND ++GN +N+
Sbjct: 263 DTFDFSGYTENQN-IYLNELSFSDVGGLVANISIAADVVIENAIGGSGNDKLVGNDVDNI 321
Query: 289 FFESSGNDVFDGSSGLDTFFY 309
+G D G G + F Y
Sbjct: 322 LTGGAGADHLWGDEGNNIFRY 342
>gi|238623360|emb|CAS06674.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 283
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 12 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGFATRGLGTFSQFSSLQ 71
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E H S++NG Y+ + +
Sbjct: 72 KEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESWY 131
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 132 LINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 188
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI---- 209
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 189 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTA 248
Query: 210 -----EVQQKDSPFIQTIYDSGGDDLLDLT 234
S I +++D GG+D LD +
Sbjct: 249 DRDFYSATSASSKLIFSVWDGGGNDTLDFS 278
>gi|238623352|emb|CAS06670.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 279
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 114/272 (41%), Gaps = 45/272 (16%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 8 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 67
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG---YVCTP----RYDSRY 98
+E A+ +L W+ V +TF E + H S++NG + P + +S Y
Sbjct: 68 KEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSARKGESWY 127
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYEND 156
+ +++ G+G HEIGH LGL HPG YN G P Y D Y D
Sbjct: 128 LINKDYEVNKT----PGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGED 182
Query: 157 SFLTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI-- 209
+ SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 183 TRAYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNS 242
Query: 210 -------EVQQKDSPFIQTIYDSGGDDLLDLT 234
S I +++D GG+D LD +
Sbjct: 243 TADRDFYSATSASSKLIFSVWDGGGNDTLDFS 274
>gi|186684725|ref|YP_001867921.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
gi|186467177|gb|ACC82978.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
Length = 522
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 36/213 (16%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVY-GVDNDYEN------DSFLTSVMSY---FMPQDSMMD 174
+HE+GH LGL HP GG P+Y GV + + + + + + MSY F Q+ +
Sbjct: 154 IHELGHGLGLAHPHDNGGGSPIYPGVTSPFRSLGNLGLNQGIYTTMSYNSGFYSQNGNQE 213
Query: 175 A-SFGYCATPMVSDIVAVQKIYGAPKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
+G +TPM DI A+Q +YG P S GN+ Y + + I+D+GG D +
Sbjct: 214 KLGYGLESTPMAFDIAAIQYLYG-PNNSYKTGNDTYYLPSVNQSGTSYSCIWDAGGVDTI 272
Query: 232 DLTLIGGVKNY----IDLNTESWSSI------GGYEKN-------MTIAQHTVIESVVGS 274
+ G+ IDLN S ++ GGY + TIA VIE+ GS
Sbjct: 273 N-----GISAQSDVTIDLNDASLNTAQDGAGAGGYVSSAKGIFGGFTIANSVVIENATGS 327
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ND +IGN +N + GND DG +G DT
Sbjct: 328 NFNDQIIGNEFSNSLVGNDGNDTIDGGAGSDTI 360
>gi|317447661|emb|CBJ55062.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 284
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 12 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 71
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E H S++NG Y+ + +
Sbjct: 72 KEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESWY 131
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 132 LINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 188
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI---- 209
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 189 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTA 248
Query: 210 -----EVQQKDSPFIQTIYDSGGDDLLDLT 234
S I +++D GG+D LD +
Sbjct: 249 DRDYYSATSASSKLIFSVWDGGGNDTLDFS 278
>gi|325982056|ref|YP_004294458.1| Serralysin [Nitrosomonas sp. AL212]
gi|325531575|gb|ADZ26296.1| Serralysin [Nitrosomonas sp. AL212]
Length = 477
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 125 LHEIGHALGLMHPGSYNG-GYP-------VYGVDNDYENDSFLTSVMSYF--------MP 168
+HE+GHA+GL HP G G P +G D+ + L ++MSY P
Sbjct: 153 IHELGHAVGLKHPHDSGGDGRPNFPGVTAPFGDYGDFNLNQGLYTMMSYNDGWPAGPNGP 212
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQTIYDSGG 227
D + + +GY TPM DI A+Q +YG+ GNN+Y + F I+D+ G
Sbjct: 213 LDPVSISGYGYEGTPMAFDIAALQFLYGSNTNFQTGNNVYTLGSTNASGTFYSAIWDTKG 272
Query: 228 DDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSSGN 277
D + + + IDL + SS+ G TIA +E+ +G SG
Sbjct: 273 IDTIRNP--SAIDSTIDLRGATLLHAAGGGGYLSSVDGINGGFTIANGVTVENAIGGSGA 330
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
D +IGN N ++GND +G G DT
Sbjct: 331 DTIIGNRVANTLTGNAGNDRINGLGGADTII 361
>gi|163743491|ref|ZP_02150869.1| PaxA, putative [Phaeobacter gallaeciensis 2.10]
gi|161383194|gb|EDQ07585.1| PaxA, putative [Phaeobacter gallaeciensis 2.10]
Length = 483
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 134/316 (42%), Gaps = 71/316 (22%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTF-EETSIHSDIKFIS------------------SNNG 87
++P +++ A+ W++V +L +D+ F S S+ G
Sbjct: 61 MDPAERQMMLQAVAAWNEVANLNLIPARGGTADLTFASAHFADAGLFGFIADFPDPSDLG 120
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----LHEIGHALGLMHPGSYNGG 143
+P D + +N D + GIG IL H + LHE+GHALGL HP
Sbjct: 121 TRPSPAGD----LWLNNSNPDQYVPGIGP--ILGHTSWNTYLHELGHALGLHHPNEM--- 171
Query: 144 YPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASF-GYCATPMVSDIVAVQKIYGAPKGS 201
+N F +VMSY P ++ +D G+ TPM+ D+ A+Q +YGA +
Sbjct: 172 -----PENPTTPGQF--TVMSYLPHPGEADLDQDLQGWALTPMLWDMQALQALYGANTET 224
Query: 202 L-------------GNNIYK-----IEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVK 240
G+ Y+ + VQ D TI+D+GG DL+D + + G
Sbjct: 225 RTDATSYFGDGDGRGDQAYQYGADDMTVQGGDGVARNVSLTIWDAGGQDLIDASDVAG-N 283
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHT--------VIESVVGSSGNDVVIGNSANNVFFES 292
+ IDL +S+IG E N+ +A +IE G +GND + GN A N +
Sbjct: 284 SRIDLRPGQYSTIGALENNVAMAAAVRVDGRTLNLIEDAWGGAGNDHLTGNGAANELAGN 343
Query: 293 SGNDVFDGSSGLDTFF 308
+G D G+ D
Sbjct: 344 AGRDTLAGARNSDVLI 359
>gi|317447655|emb|CBJ55059.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 287
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 14 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 73
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E H S++NG Y+ + +
Sbjct: 74 KEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESWY 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 134 LINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 190
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI---- 209
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 191 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTA 250
Query: 210 -----EVQQKDSPFIQTIYDSGGDDLLDLT 234
S I +++D GG+D LD +
Sbjct: 251 DRDYYSATSASSKLIFSVWDGGGNDTLDFS 280
>gi|149186560|ref|ZP_01864872.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Erythrobacter sp. SD-21]
gi|148829787|gb|EDL48226.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Erythrobacter sp. SD-21]
Length = 1933
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 136/295 (46%), Gaps = 46/295 (15%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSD----IKFISS--NNGYVC---TPRYDSRYF 99
N+ ++ R A+ WS V ++TF+E S S+ ++I S N GY TP +
Sbjct: 55 TNSDDMFRLAIDRWSAVANITFQEASDPSENPDWTEYIVSGQNYGYGAYHYTPGGPGGAY 114
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD--NDYENDS 157
+ A G G T L HEIGHALGL H +G P GV ND +++
Sbjct: 115 NAYYVNTATNVEGGYGLYTFL-----HEIGHALGLNHTFETDGDGPFPGVSGSNDPGDNN 169
Query: 158 FLT---SVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV 211
T SVM+Y P + ++ GY ATPM DI A+Q IYGA + G+++Y +
Sbjct: 170 LSTGLYSVMAYVFQNPDYASGYSNIGYAATPMAFDIAAIQAIYGANMTTATGDDVYYLPP 229
Query: 212 QQKDSPFIQTIYDSGGDDLL-----------DL---TLI-----GGVKNYIDLNTESWSS 252
F + I+D G D + DL TL+ GG +Y D ++ +
Sbjct: 230 STGTQAF-ECIWDVSGTDTISAELSDGGTTIDLRAATLLNEVGGGGWLSYQDGSSGAGVV 288
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
GGY TIA VIE+ VGS+ D + GN NV SG+D G G D+
Sbjct: 289 YGGY----TIANGVVIENAVGSTYADTITGNDEANVLDGGSGDDTIFGLGGDDSI 339
>gi|163740056|ref|ZP_02147460.1| possible protease [Phaeobacter gallaeciensis BS107]
gi|161386687|gb|EDQ11052.1| possible protease [Phaeobacter gallaeciensis BS107]
Length = 483
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 131/311 (42%), Gaps = 63/311 (20%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTF-EETSIHSDIKFISS---NNGY----VCTPRYDSRY 98
++P +++ A+ W++V +L +D+ F S+ N G V P D
Sbjct: 61 MDPAERQMMLQAVAAWNEVANLNLIPARGGTADLTFASAHFANAGLFGFIVDFP--DPSD 118
Query: 99 FMEINFDKADVW-------RYGIGKGTILSHNA----LHEIGHALGLMHPGSYNGGYPVY 147
D+W +Y G G IL H + LHE+GHALGL HP
Sbjct: 119 LGTRPSPAGDLWLNNSNPDQYVPGIGPILGHTSWNTYLHELGHALGLHHPNEM------- 171
Query: 148 GVDNDYENDSFLTSVMSYFM-PQDSMMDASF-GYCATPMVSDIVAVQKIYGA-------- 197
+N F +VMSY P D+ + G+ TPM+ D+ AVQ +YGA
Sbjct: 172 -PENPTTPGQF--TVMSYLPHPGDADLGQDLQGWALTPMLWDMQAVQALYGANTETRTDA 228
Query: 198 -----PKGSLGNNIYK-----IEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKNYID 244
G Y+ + V+ D TI+D+GG DL+D + I + ID
Sbjct: 229 TVYLGAGDGRGGQAYQYGADGMTVRGGDGVARNVSLTIWDAGGQDLIDASDIE-TNSRID 287
Query: 245 LNTESWSSIGGYEKNMTIAQHT--------VIESVVGSSGNDVVIGNSANNVFFESSGND 296
L +SSIG E N+ +A +IE G +G+D +IGN A N ++G D
Sbjct: 288 LRPGQYSSIGTLENNVAMAAAVRLDGRTLNLIEDAWGGAGHDHLIGNGAANELLGNAGRD 347
Query: 297 VFDGSSGLDTF 307
G+ G D
Sbjct: 348 TLAGARGGDEL 358
>gi|38455763|gb|AAR20883.1| alkaline protease [Pseudomonas aeruginosa]
Length = 459
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HE+ H LGL HP Y+ G P Y D Y D+ S + Q++ D Y + P
Sbjct: 165 HELNHTLGLSHPEDYHAGERDPTY-ADATYAEDTRKASTNMSWEEQNTGQDFKGAYSSAP 223
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYK----------IEVQQKDSPFIQTIYDSGGDDLLDL 233
++ I ++QKIYGA + + Y S + +++D+ G+ LD
Sbjct: 224 LMGGIASLQKIYGANLTTRKGDTYVGFNSNTQRDFYSATSSSSKIVFSVWDAAGNQTLDF 283
Query: 234 TLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G +N I+ N ++ S + ++N+T+A +E+ +G SG+D++IGN NV
Sbjct: 284 S--GFTQNQKINANEKALSEVNNLKRNVTLAAEVTVENALGGSGSDLLIGNDVANVIKGG 341
Query: 293 SGNDVFDGSSGLDTFF 308
+ D+ G G + +
Sbjct: 342 ANGDILYGRLGANQLW 357
>gi|238623416|emb|CAS06702.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 288
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 11 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 70
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E H S++NG Y+ + +
Sbjct: 71 KEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESWY 130
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 131 LINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 187
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI---- 209
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 188 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTA 247
Query: 210 -----EVQQKDSPFIQTIYDSGGDDLLDLT 234
S I +++D GG+D L+ +
Sbjct: 248 DRDYYSATSASSKLIFSVWDGGGNDTLEFS 277
>gi|209967239|ref|YP_002300154.1| Alkaline protease, putative [Rhodospirillum centenum SW]
gi|209960705|gb|ACJ01342.1| Alkaline protease, putative [Rhodospirillum centenum SW]
Length = 1518
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 124/307 (40%), Gaps = 64/307 (20%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
+ L Q R AL WS+V L+F + T DI+ + +P + ++
Sbjct: 67 SALTAAQQTAVRAALNAWSEVSGLSFTQAATPAQGDIRLY-----WYLSPDNLTARIVDY 121
Query: 103 NFDKADVWRYGIGKGTILSH---------NALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + +G ++ LHE+GHALGL HP G+P D
Sbjct: 122 PSDQPEGGDLQLGSAAGVASWDPGSYAYFLLLHELGHALGLKHPHDSVNGFPAA----DS 177
Query: 154 ENDSFLTSVMSYFM----PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL--GNNIY 207
D SVMSY P + A+ Y PM++DI A+Q +YG P S G+ Y
Sbjct: 178 SQDWVGLSVMSYRSQAGGPVEGYSLAAGSYPFRPMLNDIAAIQALYG-PNWSTNAGDTTY 236
Query: 208 KIEVQQKDSPFI-QTIYDSGGDDL-------LDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ +P I T++D GGDD DLT + L W S+GG +
Sbjct: 237 SFD---PTAPVIFMTLWDGGGDDTYNFASYATDLT--------VSLLPGEWISLGGQQAI 285
Query: 260 MTIA------------------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ Q ++IE+ +G SG+D + GN A+N GND G
Sbjct: 286 LDTGSGVRAPGNIANPYLYQGDQRSLIENAIGGSGHDRITGNVADNRLEGRDGNDTLTGG 345
Query: 302 SGLDTFF 308
G DT
Sbjct: 346 DGNDTLI 352
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 24/234 (10%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND V G + +G+D DG SG+D A + +
Sbjct: 1291 GDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEATGPWGVRLSGAA 1350
Query: 333 HKQDFLSDVERLRFADQCI-DSVNVKQRSILE----------YTASYEDLIQVIGQDVFE 381
D S VE +RF DQ + ++ V+ ++ Y A + D+ + F+
Sbjct: 1351 TGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLAQWADVRAAVADGRFQ 1410
Query: 382 S-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNP 437
S ++H+ FG +EGRD T FD YL + D+R + + + HY+ G +E R+P
Sbjct: 1411 SGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDRDP 1470
Query: 438 DA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYL 489
A F Y+ + D+ +A D H+ +G E R T D+ L+L
Sbjct: 1471 SAWFDLSAYLQRNSDVADAGIDP-------LRHWLVWGIGEDRIATAADTGLWL 1517
>gi|238623398|emb|CAS06693.1| alkaline metalloprotease [Pseudomonas rhodesiae]
Length = 278
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 115/278 (41%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N NAQ
Sbjct: 7 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 66
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V ++TF E + D N GY T
Sbjct: 67 QKAQAVLAMQSWADVANVTFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 126
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 127 WYLTNSSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 177
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 178 ASYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDT 237
Query: 206 IYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 238 TYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 275
>gi|150377401|ref|YP_001313996.1| serralysin [Sinorhizobium medicae WSM419]
gi|150031948|gb|ABR64063.1| Serralysin [Sinorhizobium medicae WSM419]
Length = 648
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 127/315 (40%), Gaps = 73/315 (23%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTF----EETSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
LN Q AR ++S V ++F E + H+D++ SS+ P YF
Sbjct: 56 LNAAQQTTARAVFDQFSSVAKVSFTEIAESATKHADVRLASSD-----APSTAWAYFPST 110
Query: 103 NFDKADVWRYGIG-------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ D W KG LHEIGHALGL H N P
Sbjct: 111 AAEGGDAWFNSSSGYYSRPMKGNYAYLTFLHEIGHALGLEHAHEGNV-MPA-------NR 162
Query: 156 DSFLTSVMSY-----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK- 208
DS +VMSY ++ ++GY + M+ DI A+Q IYGA GN Y+
Sbjct: 163 DSMEYTVMSYRSYVGASTTTGYINETWGYAQSLMMYDIAALQHIYGADFTTQSGNTTYRW 222
Query: 209 --------IEVQQKDSP----FIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWS 251
I +++P + T++D GG D D + NY +DL W+
Sbjct: 223 SPTSGEMFINGVGQNAPGGNKILLTVWDGGGTDTYDFS------NYTTALKVDLRPGEWT 276
Query: 252 SIGGYE-------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + N+ A ++IE+ G +GNDV+ GN+A NV + +
Sbjct: 277 TTSAVQLAKLRYDDSKVAIGNIANALQYQSDARSLIENAKGGAGNDVITGNAAANVLWGN 336
Query: 293 SGNDVFDGSSGLDTF 307
GND G++G D
Sbjct: 337 GGNDRLIGANGNDNL 351
>gi|307318732|ref|ZP_07598165.1| Peptidase M10 serralysin [Sinorhizobium meliloti AK83]
gi|306895759|gb|EFN26512.1| Peptidase M10 serralysin [Sinorhizobium meliloti AK83]
Length = 1112
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 163/374 (43%), Gaps = 75/374 (20%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY-VCT 91
+ L ++ ELN P + A AL W+ V L FE I D F S+ + V +
Sbjct: 46 MAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFE---IVDDTPFDSTTDWMEVVS 102
Query: 92 P--------------RYDS--RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
P RY S + F + +K D+ Y + + +HE GH GL
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGY-------VFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HPG YN P GV +Y N++ T SVMSYF D + + S +TP+++DI
Sbjct: 156 HPGLYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSASTPLMADIE 213
Query: 190 AV------------QKIYGAPKGSLGNNIYKIEVQQ----KDSPFIQ-----TIYDSGGD 228
AV + Y + G+N+Y Q S +Q I+D+GG
Sbjct: 214 AVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGA 273
Query: 229 DLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-AQHTV------IESVVGSSGNDVV 280
D +D + G I DL +SS+ G+ N++I A H IE+ +GS +D++
Sbjct: 274 DTIDFS--GSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDIL 331
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----NAIIVYDANEHKQD 336
IGN N SG D G+ G DT+F + L I R E N ++ + K
Sbjct: 332 IGNDGANTLDGRSGGDRMAGNGGDDTYFVDS---LEDIVREEANGGNDTVILLSRNLKIR 388
Query: 337 FLSDVERLRFADQC 350
+++VE + +AD+
Sbjct: 389 KIANVENIIYADES 402
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 35/207 (16%)
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+ +V + +S G + P D I+G GN ++ D
Sbjct: 390 IANVENIIYADESTTQPGGGGASPPSAGDNTMTSIIFG------GNGNDTLDGGAGD--- 440
Query: 219 IQTIYDSGGDDLLDLTLIGG--------VKNYIDL-----NTESWSSIGGYEKNMTIAQH 265
TI+ GGDDL+ IGG + N ID+ TES + N T+
Sbjct: 441 -DTIFGRGGDDLI----IGGRDSLASRDINNTIDVEDLEDQTES------DDGNDTLYGG 489
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G GND++ G + +++ G D+F G +G+DT + S + A
Sbjct: 490 GGNDTILGGQGNDILDGGAGDDMLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNL--AT 547
Query: 326 IVYDANEHKQDFLSDVERLRFADQCID 352
V D +E L +D ID
Sbjct: 548 NVASGGTASGDTFYSIENLIGSDDRID 574
>gi|238623394|emb|CAS06691.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 287
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 113/278 (40%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP Y+ ++ A LLRD + ++ K D+ T S +N N Q
Sbjct: 13 NGKPSYSVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSATMNKHGISGFSQFNTQ 72
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ AL WS V ++TF E + D N GY T
Sbjct: 73 QKAQAALAMQSWSDVANVTFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 133 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 184 ATYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDT 243
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 244 TYGFNSNTGRDFYSAKSNADKLVFSVWDGGGNDTLDFS 281
>gi|163743675|ref|ZP_02151050.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
gi|161383042|gb|EDQ07436.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
Length = 1112
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 143/327 (43%), Gaps = 66/327 (20%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFE---ETSIHSDIKFI------- 82
+ L ++T LN P ++ A AL WS V L FE + +D+ ++
Sbjct: 46 IAAEPLVINLTGLNDHPAYKDAAIGALEMWSSVTPLQFEIVDDAPYDADLHWMEVVSPEI 105
Query: 83 --SSNNGYVCTPRYDS--RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
S+ + RY S + F + D D+ Y + +HE GH GL HPG
Sbjct: 106 GEQSDGSAFSSDRYVSVGQRFHDTEPDITDLGGY-------VFDTFVHEFGHEFGLNHPG 158
Query: 139 SYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
YN P GV +Y N++ T SVMSYF D D + TP++ DI A+
Sbjct: 159 LYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGIDVGEDTRW-SAVTPLMGDIEAII 216
Query: 193 KIYGAPKGSLGNNIYKI-----------------------EVQQKDSPFIQTIYDSGGDD 229
+ Y + G Y+ + Q D F+ I+D+GGDD
Sbjct: 217 RRYFSTVDDEGVRTYQTINLNTDDNTYGFNSTEYGYLLTEDGPQHDIGFV--IHDTGGDD 274
Query: 230 LLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-AQHTV------IESVVGSSGNDVVI 281
+D + G + I DL +SS+ G+ N++I A H +E+ +GSS +D++I
Sbjct: 275 TIDFS--GSTASTILDLRAGEFSSVNGHNNNVSIFAGHNADQTEYYVETGIGSSYDDILI 332
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFF 308
GN +NV +GND G+ G D +F
Sbjct: 333 GNDGDNVLDGRAGNDRMAGNGGDDVYF 359
>gi|163736817|ref|ZP_02144235.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
gi|161389421|gb|EDQ13772.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
Length = 1112
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 143/327 (43%), Gaps = 66/327 (20%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFE---ETSIHSDIKFI------- 82
+ L ++T LN P ++ A AL WS V L FE + +D+ ++
Sbjct: 46 IAAEPLVINLTGLNDHPAYKDAAIGALEMWSSVTPLQFEIVDDAPYDADLHWMEVVSPEI 105
Query: 83 --SSNNGYVCTPRYDS--RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
S+ + RY S + F + D D+ Y + +HE GH GL HPG
Sbjct: 106 GEQSDGSAFSSDRYVSVGQRFHDTEPDITDLGGY-------VFDTFVHEFGHEFGLNHPG 158
Query: 139 SYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
YN P GV +Y N++ T SVMSYF D D + TP++ DI A+
Sbjct: 159 LYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGIDVGEDTRW-SAVTPLMGDIEAII 216
Query: 193 KIYGAPKGSLGNNIYKI-----------------------EVQQKDSPFIQTIYDSGGDD 229
+ Y + G Y+ + Q D F+ I+D+GGDD
Sbjct: 217 RRYFSTVDDEGVRTYQTINLNTDDNTYGFNSSEYGYLLTEDGPQHDIGFV--IHDTGGDD 274
Query: 230 LLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-AQHTV------IESVVGSSGNDVVI 281
+D + G + I DL +SS+ G+ N++I A H +E+ +GSS +D++I
Sbjct: 275 TIDFS--GSTASTILDLRAGEFSSVNGHNNNVSIFAGHNADQTEYYVETGIGSSYDDILI 332
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFF 308
GN +NV +GND G+ G D +F
Sbjct: 333 GNDGDNVLDGRAGNDRMAGNGGDDVYF 359
>gi|226328851|ref|ZP_03804369.1| hypothetical protein PROPEN_02752 [Proteus penneri ATCC 35198]
gi|225202037|gb|EEG84391.1| hypothetical protein PROPEN_02752 [Proteus penneri ATCC 35198]
Length = 264
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 182 TPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQK---------DSPFIQTIYDSGGDDLL 231
TP + DI A+Q+ YG K + +GN IY K + + I+D+GG D L
Sbjct: 5 TPQLMDICAIQETYGQNKATRIGNTIYGFNSNTKKDYYSLKTSEDKIVACIWDTGGIDTL 64
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + V IDLN S+S +GG N++IA VIE+ +G S D++ GN ANN F
Sbjct: 65 DFSKYT-VDQKIDLNEGSFSDVGGLRANISIAYDAVIENAIGGSQTDIISGNDANNRLFG 123
Query: 292 SSGNDVFDGSSGLDTFF 308
G D G G D +
Sbjct: 124 KLGEDTLYGKGGNDILY 140
>gi|194337579|ref|YP_002019373.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310056|gb|ACF44756.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
Length = 1099
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 26/181 (14%)
Query: 363 EYTASYEDLIQVIGQDVFE------SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+Y ASY DL+ +G D + +H+ + SEGR ITF+++ YL S DL N G
Sbjct: 14 QYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEYLASNPDLMNWLG 73
Query: 417 ------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-ADA---PDLVQVG 466
+D A +HYI HG E R F A EY+AS+ DL+N AD D V
Sbjct: 74 ADGFTHADATTATKHYIEHGYHEDRTI-TFDAWEYLASNPDLMNWLGADGVTDADAVTAA 132
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGS--------YDDLRNVFGSDRGAAARHYITHGVKEG 518
K H+ +G E R +TFD+ YL + YD L + AA+HYIT+G E
Sbjct: 133 K-HYMQYGVHEDRTITFDAAAYLAANADLQHWIYDLLHLSGDAANDFAAQHYITNGRFEN 191
Query: 519 R 519
R
Sbjct: 192 R 192
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 95/182 (52%), Gaps = 25/182 (13%)
Query: 444 EYIASHEDLINAFADAPDLVQVGKD----HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+Y+AS+ DL++ + A L D H++N+ EGR +TF+++ YL S DL N
Sbjct: 14 QYLASYADLMD-WLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEYLASNPDLMNWL 72
Query: 500 G------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-ADA---PDLVQA 549
G +D A +HYI HG E R F A EY+AS+ DL+N AD D V A
Sbjct: 73 GADGFTHADATTATKHYIEHGYHEDRTI-TFDAWEYLASNPDLMNWLGADGVTDADAVTA 131
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSYD-------DLWNVFG-SDRSAAAQHYITHGMKE 601
K H+ +G E R+ITF+ YL + DL ++ G + AAQHYIT+G E
Sbjct: 132 AK-HYMQYGVHEDRTITFDAAAYLAANADLQHWIYDLLHLSGDAANDFAAQHYITNGRFE 190
Query: 602 GR 603
R
Sbjct: 191 NR 192
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 70/141 (49%), Gaps = 24/141 (17%)
Query: 398 TFDSYLYLGSYDDLRNVFG------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ DS+ YL SY DL + G +D AA+HY + EGR F A EY+AS+ D
Sbjct: 9 SLDSWQYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTI-TFNAWEYLASNPD 67
Query: 452 LINAF-------ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG---- 500
L+N ADA + H+ G E R +TFD++ YL S DL N G
Sbjct: 68 LMNWLGADGFTHADATTATK----HYIEHGYHEDRTITFDAWEYLASNPDLMNWLGADGV 123
Query: 501 --SDRGAAARHYITHGVKEGR 519
+D AA+HY+ +GV E R
Sbjct: 124 TDADAVTAAKHYMQYGVHEDR 144
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 528 EYIASHEDLINAFADAPDLVQAGKD----HFSNFGYEEGRSITFNPDLYLTSYDDLWNVF 583
+Y+AS+ DL++ + A L A D H++N+ EGR+ITFN YL S DL N
Sbjct: 14 QYLASYADLMD-WLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEYLASNPDLMNWL 72
Query: 584 G------SDRSAAAQHYITHGMKEGRAL 605
G +D + A +HYI HG E R +
Sbjct: 73 GADGFTHADATTATKHYIEHGYHEDRTI 100
>gi|307315398|ref|ZP_07594966.1| Peptidase M10 serralysin [Sinorhizobium meliloti BL225C]
gi|306898818|gb|EFN29473.1| Peptidase M10 serralysin [Sinorhizobium meliloti BL225C]
Length = 1112
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 163/374 (43%), Gaps = 75/374 (20%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY-VCT 91
+ L ++ ELN P + A AL W+ V L FE I D F S+ + V +
Sbjct: 46 MAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFE---IVDDTPFDSTTDWMEVVS 102
Query: 92 P--------------RYDS--RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
P RY S + F + +K D+ Y + + +HE GH GL
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGY-------VFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HPG YN P GV +Y N++ T SVMSYF D + + S +TP+++DI
Sbjct: 156 HPGLYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSASTPLMADIE 213
Query: 190 AV------------QKIYGAPKGSLGNNIYKIEVQQ----KDSPFIQ-----TIYDSGGD 228
AV + Y + G+N+Y Q S +Q I+D+GG
Sbjct: 214 AVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGV 273
Query: 229 DLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-AQHTV------IESVVGSSGNDVV 280
D +D + G I DL +SS+ G+ N++I A H IE+ +GS +D++
Sbjct: 274 DTIDFS--GSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDIL 331
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----NAIIVYDANEHKQD 336
IGN N SG D G+ G DT+F + L I R E N ++ + K
Sbjct: 332 IGNDGANTLDGRSGGDRMAGNGGDDTYFVDS---LEDIVREEANGGNDTVILLSRNLKIR 388
Query: 337 FLSDVERLRFADQC 350
+++VE + +AD+
Sbjct: 389 KIANVENIIYADES 402
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 35/207 (16%)
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+ +V + +S G + P+ D I+G GN ++ D
Sbjct: 390 IANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFG------GNGNDTLDGGAGD--- 440
Query: 219 IQTIYDSGGDDLLDLTLIGG--------VKNYIDL-----NTESWSSIGGYEKNMTIAQH 265
TI+ GGDDL+ IGG + N ID+ TES + N T+
Sbjct: 441 -DTIFGKGGDDLI----IGGRDSLASRDINNTIDVEDLEDQTES------DDGNDTLYGG 489
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G GND++ G + ++V G D+F G +G+DT + S + A
Sbjct: 490 GGNDTILGGQGNDILDGGAGDDVLSGQDGADIFRGGAGVDTVDFSKESPFQLLVNL--AT 547
Query: 326 IVYDANEHKQDFLSDVERLRFADQCID 352
V D +E L +D ID
Sbjct: 548 NVASGGTASGDTFHSIENLIGSDDRID 574
>gi|16264732|ref|NP_437524.1| putative outer membrane secretion protein [Sinorhizobium meliloti
1021]
gi|15140870|emb|CAC49384.1| putative hemolysin-adenlyate cyclase protein [Sinorhizobium
meliloti 1021]
Length = 1112
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 163/374 (43%), Gaps = 75/374 (20%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY-VCT 91
+ L ++ ELN P + A AL W+ V L FE I D F S+ + V +
Sbjct: 46 MAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFE---IVDDTPFDSTTDWMEVVS 102
Query: 92 P--------------RYDS--RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
P RY S + F + +K D+ Y + + +HE GH GL
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGY-------VFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HPG YN P GV +Y N++ T SVMSYF D + + S +TP+++DI
Sbjct: 156 HPGLYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSASTPLMADIE 213
Query: 190 AV------------QKIYGAPKGSLGNNIYKIEVQQ----KDSPFIQ-----TIYDSGGD 228
AV + Y + G+N+Y Q S +Q I+D+GG
Sbjct: 214 AVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGV 273
Query: 229 DLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-AQHTV------IESVVGSSGNDVV 280
D +D + G I DL +SS+ G+ N++I A H IE+ +GS +D++
Sbjct: 274 DTIDFS--GSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDIL 331
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----NAIIVYDANEHKQD 336
IGN N SG D G+ G DT+F + L I R E N ++ + K
Sbjct: 332 IGNDGANTLDGRSGGDRMAGNGGDDTYFVDS---LEDIVREEANGGNDTVILLSRNLKIR 388
Query: 337 FLSDVERLRFADQC 350
+++VE + +AD+
Sbjct: 389 KIANVENIIYADES 402
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 35/207 (16%)
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+ +V + +S G + P D I+G GN ++ D
Sbjct: 390 IANVENIIYADESTTQPGGGGASPPSAGDNTMTSIIFG------GNGNDTLDGGAGD--- 440
Query: 219 IQTIYDSGGDDLLDLTLIGG--------VKNYIDL-----NTESWSSIGGYEKNMTIAQH 265
TI+ GGDDL+ IGG + N ID+ TES + N T+
Sbjct: 441 -DTIFGKGGDDLI----IGGRDSLASRDINNTIDVEDLEDQTES------DDGNDTLYGG 489
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G GND++ G + ++V G D+F G +G+DT + S + A
Sbjct: 490 GGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNL--AT 547
Query: 326 IVYDANEHKQDFLSDVERLRFADQCID 352
V D +E L +D ID
Sbjct: 548 NVASGGTASGDTFHSIENLIGSDDRID 574
>gi|238623376|emb|CAS06682.1| alkaline metalloprotease [Pseudomonas sp. W38a]
Length = 290
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 48/277 (17%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP +T ++ ADHLLR+ + + H ++ ++ N
Sbjct: 13 NGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASQATMNKHGIT-GFSQFNT 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + +Y +
Sbjct: 72 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYH-Q 130
Query: 102 INFDKADVW----RYGIGKGTILS----HNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
D + Y K L+ HEIGH LGL HPG YN G P Y D
Sbjct: 131 SGLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-KDA 189
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNNI 206
DY D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 190 DYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGANYSTRAGDTT 249
Query: 207 YK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 250 YGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 286
>gi|84685857|ref|ZP_01013753.1| Possible Zn-dependent metalloprotease [Maritimibacter alkaliphilus
HTCC2654]
gi|84665950|gb|EAQ12424.1| Possible Zn-dependent metalloprotease [Rhodobacterales bacterium
HTCC2654]
Length = 622
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 44 ITELNPNAQEVAR--WALGEWSKVVDLTFEETSIHSDIKFI--------SSNN--GYVCT 91
IT +A ++ R A G V +LTF + F+ + +N GY
Sbjct: 153 ITSEGWSADQITRAMQAFGAIEAVTNLTFTRVDDPTSANFLFGLDDDELAVHNLLGYFHP 212
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY-GVD 150
P S +N ++ D R + GT+ +HE+ H LGL HP G V GV
Sbjct: 213 PGEASAGHGNLNGERWD--RSALVPGTLTQAILIHEVLHGLGLSHPHDTGGTSTVMDGVA 270
Query: 151 ---NDYENDSF---LTSVMSYFMPQD-------SMMDASFGYCATPMVSDIVAVQKIYGA 197
DY + + MSY + + + +GY PM DI A+Q +YGA
Sbjct: 271 VAFGDYGTAGLNQGIYTTMSYNFGWNEGDWGSFAALSGGWGYQTGPMALDIAALQSMYGA 330
Query: 198 PKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESW---SS 252
+ G++IY + + ++I+D+GG D + G+++ IDL +
Sbjct: 331 NLATADGDDIYDLPDLNQIGTGWRSIWDTGGTDTIRYA---GLRDAIIDLRPATLDYGPG 387
Query: 253 IGGY-------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
GG+ TIAQ +IE+ +GNDV+IGN ANN GND+ G G D
Sbjct: 388 GGGFLSAARSVAGGFTIAQGVLIENARTGTGNDVLIGNDANNALMSGRGNDLVRGGEGAD 447
Query: 306 TFFYY 310
+
Sbjct: 448 RIIAH 452
>gi|238623396|emb|CAS06692.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 284
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 115/278 (41%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N NAQ
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGIAGFSQFNAQ 72
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V ++TF E + D N GY T
Sbjct: 73 QKAQAVLAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 133 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 184 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDT 243
Query: 206 IYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 244 TYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 281
>gi|317447657|emb|CBJ55060.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 289
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 112/281 (39%), Gaps = 61/281 (21%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ A LLRD + + + H +S ++ +
Sbjct: 14 NGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGIS-GFSQFSA 72
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
Q A+ A+ W+ V ++TF E + D N GY T
Sbjct: 73 QQQNQAKLAMQSWADVANVTFTEKATGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 132
Query: 92 PRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVY 147
Y +S Y N D + R + HEIGH+LGL HPG YN G P Y
Sbjct: 133 SWYLINSGYTANKNPDLNNYGRQTL----------THEIGHSLGLAHPGDYNAGNGNPTY 182
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG--- 200
D Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 183 N-DASYGQDTRGYSIMSYWSENNTSQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRT 241
Query: 201 -----SLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+N + + + +++D+GG D LD +
Sbjct: 242 GDTTYGFNSNTGRDFLSASSSSDKVVFSVWDAGGKDTLDFS 282
>gi|238623372|emb|CAS06680.1| alkaline metalloprotease [Pseudomonas sp. Z57b]
Length = 282
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 113/277 (40%), Gaps = 48/277 (17%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H ++ ++ N
Sbjct: 6 NGKPSFSVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASSATMNKHGIT-GFSQFNT 64
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + +Y +
Sbjct: 65 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYH-Q 123
Query: 102 INFDKADVW----RYGIGKGTILS----HNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
D + Y K L+ HEIGH LGL HPG YN G P Y D
Sbjct: 124 SGLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-KDA 182
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNNI 206
DY D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 183 DYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTT 242
Query: 207 YK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 243 YGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 279
>gi|238761252|ref|ZP_04622229.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238761505|ref|ZP_04622481.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238700479|gb|EEP93220.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238700732|gb|EEP93472.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
Length = 436
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 125/288 (43%), Gaps = 42/288 (14%)
Query: 38 HRLSFD--ITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS-------SNN 86
+RL D I+ LN R A+ S V ++ F E S++++I ++ S
Sbjct: 65 YRLKNDGPISALNQWQISQTRIAMQSISDVANIRFIEVNESVNANIPIVNVHPEQPISAA 124
Query: 87 GYVCTPRYDSRYFMEINFDKADVW-----RYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
GY +P + + IN D + YG G + +H EI H LGL H
Sbjct: 125 GYAYSPNQRNLSPVCINADFPENLTPTHSNYG---GRVFTH----EIMHTLGLKHT---- 173
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+D + SVMSY+ S D Y TP + DI A+Q +YG +
Sbjct: 174 ---------HDTVRLTQQKSVMSYYSEWYSDADYGGHYAYTPQLYDIAALQYLYGPNMST 224
Query: 202 -LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
GN+IY I I+D+ G D LD + I+L S+S IGG + N+
Sbjct: 225 RTGNDIYTYSSHAP----ILCIWDADGIDTLDFSY-QTQDQVINLTAGSFSHIGGLKGNI 279
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+IA VIE+ +G GND + GN NV G+D G +G D +
Sbjct: 280 SIAYGVVIENAIGGCGNDQLWGNKEVNVLAGGDGDDKLSGGNGADHLW 327
>gi|238623374|emb|CAS06681.1| alkaline metalloprotease [Pseudomonas sp. W12b]
Length = 277
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 113/277 (40%), Gaps = 48/277 (17%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H ++ ++ N
Sbjct: 3 NGKPSFSVDQAADHLLRENAAYRDLDGNGKIDLTYTFLTSASSATMNKHGIT-GFSQFNT 61
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + +Y +
Sbjct: 62 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYH-Q 120
Query: 102 INFDKADVW----RYGIGKGTILS----HNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
D + Y K L+ HEIGH LGL HPG YN G P Y D
Sbjct: 121 SGLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-KDA 179
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNNI 206
DY D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 180 DYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTT 239
Query: 207 YK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 240 YGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 276
>gi|123444226|ref|YP_001008194.1| metalloprotease [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122091187|emb|CAL14070.1| metalloprotease [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 492
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 88/195 (45%), Gaps = 26/195 (13%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HE GHALGL H +D + TSVMSY +S + +TP
Sbjct: 159 MHEFGHALGLEHT-------------HDSVGLTQQTSVMSYLSEFNSGAIYGGNFASTPQ 205
Query: 185 VSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLT 234
+ DI A+Q +YG + +GN Y F T ++D+GG+D D +
Sbjct: 206 LHDISALQYLYGTNNRTRIGNTTYGFNSNSNRDYFTATHASDKLVFCVWDAGGNDTFDFS 265
Query: 235 LIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
G +N I L +S IGG N++IA VIE+ + SG+D + GN +NN
Sbjct: 266 --GYHQNQRITLTKRGFSDIGGLRGNVSIADKVVIENAITGSGDDEINGNRSNNTLNGGD 323
Query: 294 GNDVFDGSSGLDTFF 308
G+D G G D F
Sbjct: 324 GDDRLWGRVGNDRLF 338
>gi|89067540|ref|ZP_01155053.1| Possible Zn-dependent metalloprotease [Oceanicola granulosus
HTCC2516]
gi|89047109|gb|EAR53163.1| Possible Zn-dependent metalloprotease [Oceanicola granulosus
HTCC2516]
Length = 560
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 119/298 (39%), Gaps = 50/298 (16%)
Query: 52 QEVARWALGEWSKVVDLTFEET--SIHSDIKFISSNN-------------GYVCTPRYDS 96
++ R A W V D+ FEE +DI + + G P Y +
Sbjct: 68 KDAVRDAFAAWEAVADIRFEEVDDPERADIWYWIGDGSQMGSTLGWHEVPGEAVEPLYGA 127
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP--------VYG 148
+ +D + G G T+L HEIGH LGL HP ++GGY V
Sbjct: 128 FNWQGFGWDDRGLKPGGYGFITVL-----HEIGHGLGLAHP--HDGGYAEDATTFPGVSA 180
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMM-------DASFGYCATPMVSDIVAVQKIYGAPKG- 200
DY + + D + G+ ATPM DI A Q+IYGA
Sbjct: 181 PFADYGRHDLNQGIWTTMTYNDGWATKFPEAWSETHGWQATPMALDIAAAQEIYGANMDH 240
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSS--IGGYE 257
+ G ++Y + K I+D+GG D + + GG + IDL+ + GGY
Sbjct: 241 ATGRDVYTLPADNKRGTGYTCIWDAGGIDKI--SHRGGEEAAIIDLDDAPLTGRHAGGYV 298
Query: 258 K-------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+TIA VIE+ +G D + GN A+N+ G+D GS G D F
Sbjct: 299 SYVKGVIGGVTIANGVVIENAIGGRAGDRIRGNEAHNMLDGRGGDDHISGSRGDDRMF 356
>gi|302873081|ref|YP_003841714.1| hypothetical protein Clocel_0162 [Clostridium cellulovorans 743B]
gi|307688762|ref|ZP_07631208.1| hypothetical protein Ccel74_11408 [Clostridium cellulovorans 743B]
gi|302575938|gb|ADL49950.1| hypothetical protein Clocel_0162 [Clostridium cellulovorans 743B]
Length = 644
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 118/262 (45%), Gaps = 30/262 (11%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR-G 420
Y Y DL G D + KH+ G+ EGR + FD YL D+ G++
Sbjct: 127 YADKYPDLKTRFGYDRVKLFKHWKTSGIKEGRTFSCVFDPDYYLKHNSDVAKAVGANNYE 186
Query: 421 AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
A +H+IT G EGR + + Y + DL D L+ HF +G EGR
Sbjct: 187 GAYQHFITSGYNEGRRSSPIYDGIYYKNCYSDLKT--YDFYKLIY----HFLTYGIHEGR 240
Query: 480 --FVTFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRNPDAFKALEYIASH-ED 535
+ F+ +Y Y DL FG+ D HY+ G++EGR+ +I + E+
Sbjct: 241 SACLNFEPIVYAIRYPDLFKNFGNLDYKPYFTHYLISGIREGRS--GLYDYNFIPNPIEN 298
Query: 536 LI---NAFADA-PDL-VQAGKD------HFSNFGYEEGR--SITFNPDLYLTSYDDLWNV 582
LI +AD PDL G + H+ G +EGR S F+PD YL + D+
Sbjct: 299 LIFDEKFYADKYPDLKANLGYNKAKLFMHWKTTGIKEGRTSSYVFDPDYYLKNNSDVAKA 358
Query: 583 FGSDR-SAAAQHYITHGMKEGR 603
G++ A +H+IT G EGR
Sbjct: 359 VGANNYKGAYEHFITSGYNEGR 380
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFG-SDRG 420
Y Y DL D ++ + HF +G+ E R+ + F+ +Y Y DL G SD
Sbjct: 391 YQNCYSDLKT---HDFYKLIYHFITYGIHESRNACLNFEPIVYAIRYPDLFKALGNSDYK 447
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASH-EDLI---NAFADA-PDL-VQVGKD------ 468
HY+ G++EGR+ +I + E+LI +AD PDL + G D
Sbjct: 448 PYFTHYLISGIREGRS--GLYDYNFIPNPIENLIFDEKFYADKYPDLKAKFGYDRARLFM 505
Query: 469 HFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAA-RHYITHGVKEGRNPDAFK 525
H+ G +EGR + FD YL + D+ N G++ A +H+IT G EGR
Sbjct: 506 HWKVSGIKEGRTSSYVFDPVYYLKNNSDVSNAVGANNYEGAYQHFITSGYNEGRRSSPIY 565
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVF 583
Y ++ + + D L++ HF G EGR F +Y+ Y DL+ F
Sbjct: 566 DGSYYQNYNPELRVY-DFYKLIE----HFLVHGIHEGRRACSNFGAKVYVARYSDLFKNF 620
Query: 584 G-SDRSAAAQHYITHGMKEGR 603
G SD HY+ G+KEGR
Sbjct: 621 GTSDYKPYFTHYLISGIKEGR 641
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D+ FD Y Y DL+ FG DR +H+ T G+KEGR +Y H + A
Sbjct: 119 DLVFDEKFYADKYPDLKTRFGYDRVKLFKHWKTSGIKEGRTFSCVFDPDYYLKHNSDV-A 177
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
A + + HF G EGR + +D Y Y DL+ D H++T+
Sbjct: 178 KAVGANNYEGAYQHFITSGYNEGRRSSPIYDGIYYKNCYSDLKTY---DFYKLIYHFLTY 234
Query: 514 GVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF---GYEEGRS----- 564
G+ EGR+ F+ + Y + DL F + K +F+++ G EGRS
Sbjct: 235 GIHEGRSACLNFEPIVYAIRYPDLFKNFGNL-----DYKPYFTHYLISGIREGRSGLYDY 289
Query: 565 ---------ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+ F+ Y Y DL G +++ H+ T G+KEGR
Sbjct: 290 NFIPNPIENLIFDEKFYADKYPDLKANLGYNKAKLFMHWKTTGIKEGRT 338
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 362 LEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGR--------------DITFDSYLYLG 406
+ Y Y DL + G D H+ G+ EGR ++ FD Y
Sbjct: 249 IVYAIRYPDLFKNFGNLDYKPYFTHYLISGIREGRSGLYDYNFIPNPIENLIFDEKFYAD 308
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQV 465
Y DL+ G ++ H+ T G+KEGR F Y+ ++ D+ A A + +
Sbjct: 309 KYPDLKANLGYNKAKLFMHWKTTGIKEGRTSSYVFDPDYYLKNNSDV--AKAVGANNYKG 366
Query: 466 GKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+HF G EGR + + Y Y DL+ D H+IT+G+ E RN
Sbjct: 367 AYEHFITSGYNEGRKSSPIYHGSYYQNCYSDLKT---HDFYKLIYHFITYGIHESRNACL 423
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF---GYEEGRS--------------I 565
F+ + Y + DL A ++ K +F+++ G EGRS +
Sbjct: 424 NFEPIVYAIRYPDLFKALGNS-----DYKPYFTHYLISGIREGRSGLYDYNFIPNPIENL 478
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKS 622
F+ Y Y DL FG DR+ H+ G+KEGR S F V L S
Sbjct: 479 IFDEKFYADKYPDLKAKFGYDRARLFMHWKVSGIKEGRT---SSYVFDPVYYLKNNS 532
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 116/264 (43%), Gaps = 37/264 (14%)
Query: 364 YTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRD---ITFDSYLYLGSYDDLRNVFGSDR 419
Y + D+ + +G + ++ + +HF G +EGR I SY Y Y DL+ D
Sbjct: 348 YLKNNSDVAKAVGANNYKGAYEHFITSGYNEGRKSSPIYHGSY-YQNCYSDLKT---HDF 403
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF---GC 475
H+IT+G+ E RN F+ + Y + DL A ++ K +F+++ G
Sbjct: 404 YKLIYHFITYGIHESRNACLNFEPIVYAIRYPDLFKALGNSD-----YKPYFTHYLISGI 458
Query: 476 EEGR-------FVT-------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
EGR F+ FD Y Y DL+ FG DR H+ G+KEGR
Sbjct: 459 REGRSGLYDYNFIPNPIENLIFDEKFYADKYPDLKAKFGYDRARLFMHWKVSGIKEGRTS 518
Query: 522 D-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR-SITFNPDLYLTSYDDL 579
F + Y+ ++ D+ NA + + HF GY EGR S Y +Y+
Sbjct: 519 SYVFDPVYYLKNNSDVSNAVG--ANNYEGAYQHFITSGYNEGRRSSPIYDGSYYQNYNPE 576
Query: 580 WNVFGSDRSAAAQHYITHGMKEGR 603
V+ D +H++ HG+ EGR
Sbjct: 577 LRVY--DFYKLIEHFLVHGIHEGR 598
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGS-D 418
+ Y Y DL D ++ + HF +G+ EGR + F+ +Y Y DL FG+ D
Sbjct: 210 IYYKNCYSDLKTY---DFYKLIYHFLTYGIHEGRSACLNFEPIVYAIRYPDLFKNFGNLD 266
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASH-EDLI---NAFADA-PDL-VQVGKD---- 468
HY+ G++EGR+ +I + E+LI +AD PDL +G +
Sbjct: 267 YKPYFTHYLISGIREGRS--GLYDYNFIPNPIENLIFDEKFYADKYPDLKANLGYNKAKL 324
Query: 469 --HFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA 523
H+ G +EGR + FD YL + D+ G++ A H+IT G EGR
Sbjct: 325 FMHWKTTGIKEGRTSSYVFDPDYYLKNNSDVAKAVGANNYKGAYEHFITSGYNEGRKSSP 384
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYDDLW 580
+ Y + DL D L+ HF +G E R+ + F P +Y Y DL+
Sbjct: 385 IYHGSYYQNCYSDLKTH--DFYKLIY----HFITYGIHESRNACLNFEPIVYAIRYPDLF 438
Query: 581 NVFG-SDRSAAAQHYITHGMKEGRA 604
G SD HY+ G++EGR+
Sbjct: 439 KALGNSDYKPYFTHYLISGIREGRS 463
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 115/262 (43%), Gaps = 30/262 (11%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDR-G 420
Y Y DL +G + + H+ G+ EGR FD YL + D+ G++
Sbjct: 306 YADKYPDLKANLGYNKAKLFMHWKTTGIKEGRTSSYVFDPDYYLKNNSDVAKAVGANNYK 365
Query: 421 AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
A H+IT G EGR + Y + DL D L+ HF +G E R
Sbjct: 366 GAYEHFITSGYNEGRKSSPIYHGSYYQNCYSDLKTH--DFYKLIY----HFITYGIHESR 419
Query: 480 --FVTFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDAFKALEYIASH-ED 535
+ F+ +Y Y DL G SD HY+ G++EGR+ +I + E+
Sbjct: 420 NACLNFEPIVYAIRYPDLFKALGNSDYKPYFTHYLISGIREGRS--GLYDYNFIPNPIEN 477
Query: 536 LI---NAFADA-PDL-VQAGKD------HFSNFGYEEGR--SITFNPDLYLTSYDDLWNV 582
LI +AD PDL + G D H+ G +EGR S F+P YL + D+ N
Sbjct: 478 LIFDEKFYADKYPDLKAKFGYDRARLFMHWKVSGIKEGRTSSYVFDPVYYLKNNSDVSNA 537
Query: 583 FGSDR-SAAAQHYITHGMKEGR 603
G++ A QH+IT G EGR
Sbjct: 538 VGANNYEGAYQHFITSGYNEGR 559
>gi|238623423|emb|CAS06706.1| alkaline metalloprotease [Pseudomonas azotoformans]
gi|317447669|emb|CBJ55066.1| alkaline metalloprotease [Pseudomonas azotoformans]
Length = 282
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 114/278 (41%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP Y+ ++ A LLRD + ++ K D+ T S + +N NAQ
Sbjct: 13 NGKPSYSVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGIAGFSQFNAQ 72
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V ++TF E + D N GY T
Sbjct: 73 QKAQAVLAMQSWADVANVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 133 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 184 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASAPLIDDIAAIQKLYGANYNTRAGDT 243
Query: 206 IYKI---------EVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + +++D GG+D LD +
Sbjct: 244 TYGFNSNTGRDFYSATSNADKLVFSVWDGGGNDTLDFS 281
>gi|77460926|ref|YP_350433.1| peptidase M10A and M12B, matrixin and adamalysin [Pseudomonas
fluorescens Pf0-1]
gi|77384929|gb|ABA76442.1| putative metallopeptidase with Hemolysin-type calcium-binding
region [Pseudomonas fluorescens Pf0-1]
Length = 1133
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 131/284 (46%), Gaps = 61/284 (21%)
Query: 58 ALGEWSKVVDLTF----EETSIHSDIKFISSNNGYVCTPRYDSRY-FMEINFDKA-DVWR 111
AL WS V ++TF E + D++F GY + + ++ N K DVW
Sbjct: 80 ALSTWSAVANVTFTMVRESAASVGDLRF----GGYSGMDNKTAAWAYLPDNTPKGGDVW- 134
Query: 112 YGIG---------KGTILSHNALHEIGHALGLMHP---GSYNGGY--PVYGVDNDYENDS 157
IG KG+ +HEIGHA+GL HP G+ N P+ D
Sbjct: 135 --IGPSTDELFPSKGSYDYLTFVHEIGHAIGLKHPFSAGTLNPTVLQPLL--------DD 184
Query: 158 FLTSVMSYFMPQDSMMDASFGY-CATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKD 215
+VMSY + ++ Y TPMV DI+A+Q +YGA GN Y Q+
Sbjct: 185 VKYTVMSY--------NDNYSYQPTTPMVLDILAIQSLYGANGLWQSGNTTYSWAPNQQ- 235
Query: 216 SPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYEKNMT----------IAQ 264
+TI+D+GG+D +D + + V+ I+LN +S IG N+T IA
Sbjct: 236 --IFETIWDAGGNDTIDASNQLASVR--INLNEGQYSQIGKAFTNLTTNAAFNEGLGIAY 291
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+ VGS D +IGN+ +NV G D +G +G DT++
Sbjct: 292 GAKIENAVGSDFGDWLIGNALDNVLNGRGGADTMEGGAGNDTYY 335
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+V G++ N+ +IGN+ NNV +G D+ G +G DTF + A
Sbjct: 1001 TVTGNALNNTLIGNAGNNVLNGGAGADLLTGGAGADTFVFSA 1042
>gi|238623350|emb|CAS06669.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 254
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 12 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 71
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + H S++NG Y+ + +
Sbjct: 72 KEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESWY 131
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 132 LINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 188
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGA 197
SVMSY+ ++ Y + P++ DI AVQK+YGA
Sbjct: 189 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGA 231
>gi|238793278|ref|ZP_04636905.1| Metalloprotease [Yersinia intermedia ATCC 29909]
gi|238727446|gb|EEQ18973.1| Metalloprotease [Yersinia intermedia ATCC 29909]
Length = 404
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 88/195 (45%), Gaps = 26/195 (13%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HE GHALGL H +D + TSVMSY S + +TP
Sbjct: 72 MHEFGHALGLEHT-------------HDSMGLTQKTSVMSYLSEFYSGAIYGNNFASTPQ 118
Query: 185 VSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLT 234
+ DI+A+Q +YG + +GN Y F T ++D+GG+D D +
Sbjct: 119 LHDILALQYLYGTNNRTRIGNTTYGFNSNSNRDYFTATHASDKLVFCVWDAGGNDTFDFS 178
Query: 235 LIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
G +N I L +S IGG N++IA VIE+ + SG+D + GN +NN
Sbjct: 179 --GYHQNQRITLTKRGFSDIGGLRGNVSIADKVVIENAITGSGDDEINGNRSNNTLNGGD 236
Query: 294 GNDVFDGSSGLDTFF 308
G+D G G D F
Sbjct: 237 GDDRLWGREGNDRLF 251
>gi|317447671|emb|CBJ55067.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 283
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 113/278 (40%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N NAQ
Sbjct: 12 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 71
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V +TF E + D N GY T
Sbjct: 72 QKAQAVLAMQSWADVAKVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 131
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 132 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 182
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLGNNI 206
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + ++
Sbjct: 183 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRASDT 242
Query: 207 YK----------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ + +++D GG+D LD +
Sbjct: 243 TYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 280
>gi|238623354|emb|CAS06671.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 250
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E H S++NG Y+ + +
Sbjct: 37 KEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESWY 96
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 97 LINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 153
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI---- 209
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 154 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTA 213
Query: 210 -----EVQQKDSPFIQTIYDSGGDDLLDLT 234
S I +++D GG+D LD +
Sbjct: 214 DRDYYSATSASSKLIFSVWDGGGNDTLDFS 243
>gi|238623408|emb|CAS06698.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 289
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 56/281 (19%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDI-----------------KFISSNNGYVCTP 92
+ A A+ W+ V ++TF E + D ++ N T
Sbjct: 72 LQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYNTS 131
Query: 93 RYDSRYFMEINFDKADVWRYGI---GKGTILSHNALHEIGHALGLMHPGSYNGGY--PVY 147
D + IN D G+ G+ T+ HEIGH LGL HPG YN G P Y
Sbjct: 132 GTDGTSWYLINRGYTDNINPGLNNYGRQTLT-----HEIGHTLGLDHPGDYNAGTGNPSY 186
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-L 202
D DY D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA +
Sbjct: 187 -KDADYGQDTRGYSVMSYWSEFNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRA 245
Query: 203 GNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
G+ Y + + +++D GG+D LD +
Sbjct: 246 GDTTYGFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFS 286
>gi|218531476|ref|YP_002422292.1| hypothetical protein Mchl_3544 [Methylobacterium chloromethanicum
CM4]
gi|218523779|gb|ACK84364.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 713
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 116/282 (41%), Gaps = 58/282 (20%)
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSY-----------FMPQ 169
HEIGH+LGL HP G + GV +D + +S L +VMSY Q
Sbjct: 132 HEIGHSLGLAHPFEQPG--VIAGVRSDADLGTNFINSSLYTVMSYSSFVWGEDNPWTRAQ 189
Query: 170 D---SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
D + M+AS G + M DI A+Q +YGA + GN +Y + + TI+D+G
Sbjct: 190 DAGRTFMNASAG---SYMPIDIAALQHLYGAKAANTGNTVYTFGDDLRTNAGFNTIWDTG 246
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWS-SIGG---------YEKNMTIAQHTVIESVVGSS- 275
G+D + G + IDL + IGG IA IE+ +G S
Sbjct: 247 GNDTIRYA--GSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETAIGGSK 304
Query: 276 --------GNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKI 318
G++ +IG + N+ F +GNDV DG G+D + S Y I
Sbjct: 305 DDILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQSRDYAI 364
Query: 319 Y----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
A V D L+ +E L F D + S V
Sbjct: 365 VYDASTTAGAFAVKHIATGALDTLASIETLVFDDTALGSQGV 406
>gi|317447663|emb|CBJ55063.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 265
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 93/223 (41%), Gaps = 31/223 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 15 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 74
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E H S++NG Y+ + +
Sbjct: 75 KEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESWY 134
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 135 LINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 191
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGA 197
SVMSY+ ++ Y + P++ DI AVQK+YGA
Sbjct: 192 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGA 234
>gi|317447667|emb|CBJ55065.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 287
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 114/278 (41%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 72
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ AL W+ V ++TF E + D N GY T
Sbjct: 73 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 133 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS----- 201
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 184 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDT 243
Query: 202 ---LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+N + + + +++D GG+D LD +
Sbjct: 244 TYGFNSNTGRDFLSASSNADKLVFSVWDGGGNDTLDFS 281
>gi|238623378|emb|CAS06683.1| alkaline metalloprotease [Pseudomonas sp. W31b]
Length = 278
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP +T ++ ADHLLR+ + + H ++ ++ N
Sbjct: 11 NGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASNATMNKHGIT-GFSQFNT 69
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P +++Y E
Sbjct: 70 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNAKY-NE 128
Query: 102 INFDKADVW----RYGIGKGTILS----HNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
D + Y K L+ HEIGH LGL HPG YN G P Y D
Sbjct: 129 SGLDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-KDA 187
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGA 197
DY D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 188 DYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGA 237
>gi|238623390|emb|CAS06689.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 283
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 112/278 (40%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 12 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 71
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ AL W+ V ++TF E + D N GY T
Sbjct: 72 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 131
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 132 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 182
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLGNNI 206
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + +
Sbjct: 183 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDT 242
Query: 207 YK----------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ + +++D GG+D LD +
Sbjct: 243 TYGFNSNTGRDFLSASSNADKLVFSVWDGGGNDTLDFS 280
>gi|238623346|emb|CAS06667.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 240
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNY-----------FIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 10 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPAGYATRGLG-TFSQFSAL 68
Query: 51 AQEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYF 99
+E A+ +L W+ V +TF E H S++NG Y+ + +
Sbjct: 69 QKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESW 128
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDS 157
IN D A G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 129 YLINKDYAV--NKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDT 185
Query: 158 FLTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGA 197
SVMSY+ ++ Y + P++ DI AVQK+YGA
Sbjct: 186 RAYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGA 229
>gi|150377392|ref|YP_001313987.1| peptidase domain-containing protein [Sinorhizobium medicae WSM419]
gi|150031939|gb|ABR64054.1| peptidase domain protein [Sinorhizobium medicae WSM419]
Length = 1112
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 163/374 (43%), Gaps = 75/374 (20%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY-VCT 91
+ L ++ ELN P + A AL W+ V L FE + D F SS + V +
Sbjct: 46 MAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFE---VVDDTPFDSSTDWMEVVS 102
Query: 92 P--------------RYDS--RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
P RY S + F + +K D+ Y + + +HE GH GL
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGY-------VFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HPG YN P GV +Y N++ T SVMSYF D + + S +TP+++DI
Sbjct: 156 HPGLYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSASTPLMADIE 213
Query: 190 AV------------QKIYGAPKGSLGNNIYKIEVQQ----KDSPFIQ-----TIYDSGGD 228
AV + Y + + G+N+Y Q S +Q I+D+GG
Sbjct: 214 AVIRRFFSTVDENGVRTYQHIELNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGA 273
Query: 229 DLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-AQHTV------IESVVGSSGNDVV 280
D +D + G I DL +SS+ G+ N++I A H I++ +GS +D++
Sbjct: 274 DTIDFS--GSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADETDYYIDNGIGSRFDDIL 331
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----NAIIVYDANEHKQD 336
IGN N G D G+ G DT+F + + I R E N ++ + K
Sbjct: 332 IGNDGANTLDGRGGGDRMAGNGGDDTYFVDS---IDDIVREEANGGNDTVILLSRHLKIR 388
Query: 337 FLSDVERLRFADQC 350
+++VE + +AD+
Sbjct: 389 KIANVENIIYADET 402
>gi|163852635|ref|YP_001640678.1| hypothetical protein Mext_3220 [Methylobacterium extorquens PA1]
gi|163664240|gb|ABY31607.1| hypothetical protein Mext_3220 [Methylobacterium extorquens PA1]
Length = 713
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 116/282 (41%), Gaps = 58/282 (20%)
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSY-----------FMPQ 169
HEIGH+LGL HP G + GV +D + +S L +VMSY Q
Sbjct: 132 HEIGHSLGLAHPFEQPG--VIAGVRSDADLGTNFINSSLYTVMSYSSFVWGEDNPWTRAQ 189
Query: 170 D---SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
D + M+AS G + M DI A+Q +YGA + G+ +Y + + TI+D+G
Sbjct: 190 DAGRTFMNASAG---SYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTG 246
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWS-SIGG---------YEKNMTIAQHTVIESVVGSS- 275
G+D + +G + IDL + IGG + IA IE+ +G S
Sbjct: 247 GNDTI--RYVGSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGLLIANGVAIETAIGGSK 304
Query: 276 -----------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
GND + G + N+V +G+D DG G+D + S Y I
Sbjct: 305 DDILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQSRDYAI 364
Query: 319 Y----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
A V D L+ +E L F D + S V
Sbjct: 365 VYDASTTAGAFAVKHIATGALDTLASIETLVFDDTALGSQGV 406
>gi|238623386|emb|CAS06687.1| alkaline metalloprotease [Pseudomonas sp. W17a]
Length = 277
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 112/281 (39%), Gaps = 61/281 (21%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ A LLRD + + + H +S ++ +
Sbjct: 6 NGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGIS-GFSQFST 64
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
Q A+ A+ W+ V ++TF E + D N NGY T
Sbjct: 65 QQQTQAKLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGNGYDGT 124
Query: 92 PRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVY 147
Y +S Y N D + R HEIGH+LGL HPG YN G P Y
Sbjct: 125 SWYLINSGYTQNKNPDLNNYGR----------QTLTHEIGHSLGLAHPGDYNAGNGNPTY 174
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-L 202
D Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 175 N-DASYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLMDDIAAIQKLYGANMNTRT 233
Query: 203 GNNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
G+ Y + + +++D+GG D D +
Sbjct: 234 GDTTYGFNSNAGRDFLSASSSSDKLVFSVWDAGGKDTFDFS 274
>gi|170744798|ref|YP_001773453.1| peptidase metallopeptidase [Methylobacterium sp. 4-46]
gi|168199072|gb|ACA21019.1| peptidase metallopeptidase [Methylobacterium sp. 4-46]
Length = 641
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 125/294 (42%), Gaps = 66/294 (22%)
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------NGYVCTPR----- 93
AQ + AL WS + D+ F+E + + SN NGY R
Sbjct: 83 AQAAYKAALTLWSDIADIKFQEVAWSAAASIQISNTPEANGDTFVPSNGYSVPGRGVTDL 142
Query: 94 ------YDSRYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+ ++IN D A IG + + +HE GHALGL H G YNG Y
Sbjct: 143 PTQMAPHTRGGAVQINVSADDAAFKISSIGAPSQIG-TVVHETGHALGLGHAGRYNGSYD 201
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMD------------------ASF-GYCATPMVS 186
G + Y+ S+ S+MSY PQDS A F G +PM+
Sbjct: 202 ASGQFSAYDTQSW--SIMSYIDPQDSAAPYFDKYPVQGTQWTSYYKGAEFKGGAQSPMML 259
Query: 187 DIVAVQKIYGAPKGSL--GNNIYKIEVQQKDS------------PFIQTIYDSGGDDLLD 232
DI+A Q++YGA K S G +Y D+ P + T+Y+SG ++ LD
Sbjct: 260 DILASQRLYGASKSSTFSGGQVYGFNSNISDASRLLFDFSVNRVPIV-TLYNSGTNNTLD 318
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYE---KNMTIAQHTVIESVVGSSGNDVVIGN 283
L+ + I+LN S+SS N+ IA +T I+ VG +G+D I N
Sbjct: 319 LSGF-DTPSTINLNPGSFSSASASGLLVNNIGIAYNTRIDKAVGGAGDDTFILN 371
>gi|317447652|emb|CBJ55057.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 289
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 114/278 (41%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 14 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 73
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ AL W+ V ++TF E + D N GY T
Sbjct: 74 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 133
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 134 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 184
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS----- 201
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 185 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDT 244
Query: 202 ---LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+N + + + +++D GG+D LD +
Sbjct: 245 TYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 282
>gi|238623362|emb|CAS06675.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 286
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 114/278 (41%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 72
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ AL W+ V ++TF E + D N GY T
Sbjct: 73 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 133 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS----- 201
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 184 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDT 243
Query: 202 ---LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+N + + + +++D GG+D LD +
Sbjct: 244 TYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 281
>gi|240139968|ref|YP_002964445.1| hypothetical protein MexAM1_META1p3431 [Methylobacterium extorquens
AM1]
gi|240009942|gb|ACS41168.1| conserved hypothetical protein, putative protease-like protein
[Methylobacterium extorquens AM1]
Length = 713
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 116/282 (41%), Gaps = 58/282 (20%)
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSY-----------FMPQ 169
HEIGH+LGL HP G + GV +D + +S L +VMSY Q
Sbjct: 132 HEIGHSLGLAHPFEQPG--VIAGVRSDADLGTNFINSSLYTVMSYSSFVWGEDNPWTRTQ 189
Query: 170 D---SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
D + M+AS G + M DI A+Q +YGA + G+ +Y + + TI+D+G
Sbjct: 190 DAGRTFMNASAG---SYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTG 246
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWS-SIGG---------YEKNMTIAQHTVIESVVGSS- 275
G+D + +G + IDL + IGG IA IE+ +G S
Sbjct: 247 GNDTI--RYVGSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETAIGGSK 304
Query: 276 -----------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
GND + G + N+V +G+D DG G+D + S Y I
Sbjct: 305 DDILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQSRDYAI 364
Query: 319 Y----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
A V D L+ +E L F D ++S V
Sbjct: 365 VYDASTTAGAFAVKHIATGALDTLASIETLVFDDTALESQGV 406
>gi|238623388|emb|CAS06688.1| alkaline metalloprotease [Pseudomonas sp. W17c]
Length = 285
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 38/269 (14%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNY----FIRYKPDVLTTHRLSFD------ITELNPNA 51
N KP ++ ++ A LLRD +W++ I LT +F ++ +
Sbjct: 13 NGKPSFSVDQAATQLLRDGAHWNDLDHSGKIELTYTFLTAKTANFSGLGVTGFSQFSALQ 72
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNGYVCTPRYDSRYFMEINFDKADV 109
+ A A+ W+ V ++TF E + D + F + + G + E +D
Sbjct: 73 KAQAVLAMQSWADVANVTFTEAARGGDGHMTFGNYSGGQEGAAAFAFLPGTEPGYDGQSW 132
Query: 110 WRYGIG----KGTILS----HNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFL 159
+ G G K LS HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 133 YLTGSGYDVNKTPGLSNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTY-KDASYGQDTRG 191
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG--------SLGNNIY 207
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA +N
Sbjct: 192 YSLMSYWSESNTNQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNTG 251
Query: 208 K--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ + + +++D+GG D LD +
Sbjct: 252 RDFLSASSSSDKVVFSVWDAGGKDTLDFS 280
>gi|332163392|ref|YP_004299969.1| Peptidase M10 serralysin [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325667622|gb|ADZ44266.1| Peptidase M10 serralysin [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862188|emb|CBX72350.1| secreted protease C [Yersinia enterocolitica W22703]
Length = 413
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HEI HA+GL H +D + S+MSY + S + + Y + P
Sbjct: 147 VHEILHAIGLQHT-------------HDTAGLTQQESIMSYSSEKHSGGNYAEYYVSMPQ 193
Query: 185 VSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ DI A+Q +YG + GN+ Y D+P I I+D+GG D LD + I
Sbjct: 194 LYDIAALQYLYGPNMNTRTGNDTY---TYSSDTP-IFCIWDAGGIDTLDFSD-QTQDQVI 248
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L S+S +GG + N++IA IE+ +G SG+D +IGN+ +N+ G D G +G
Sbjct: 249 NLTAGSFSDVGGLKANISIAFGVSIENAIGGSGDDKIIGNNTDNILTGGFGADEIWGGNG 308
Query: 304 LDTFFYYAPS 313
+ F Y+ +
Sbjct: 309 SNIFRYHKTT 318
>gi|318607889|emb|CBY29387.1| metalloprotease [Yersinia enterocolitica subsp. palearctica Y11]
Length = 413
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HEI HA+GL H +D + S+MSY + S + + Y + P
Sbjct: 147 VHEILHAIGLQHT-------------HDTAGLTQQESIMSYSSEKHSGGNYAEYYVSMPQ 193
Query: 185 VSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ DI A+Q +YG + GN+ Y D+P I I+D+GG D LD + I
Sbjct: 194 LYDIAALQYLYGPNMNTRTGNDTY---TYSSDTP-IFCIWDAGGIDTLDFSD-QTQDQVI 248
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L S+S +GG + N++IA IE+ +G SG+D +IGN+ +N+ G D G +G
Sbjct: 249 NLTAGSFSDVGGLKANISIAFGVSIENAIGGSGDDKIIGNNTDNILTGGFGADEIWGGNG 308
Query: 304 LDTFFYYAPS 313
+ F Y+ +
Sbjct: 309 SNIFRYHKTT 318
>gi|304394845|ref|ZP_07376731.1| secreted protease C [Ahrensia sp. R2A130]
gi|303293036|gb|EFL87450.1| secreted protease C [Ahrensia sp. R2A130]
Length = 594
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 139/360 (38%), Gaps = 75/360 (20%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P +T D L+ N I Y + T +F E AQ A W ++V
Sbjct: 2 PNFTNNAYQDALIEGYRLGNTTIEYY--LADTAAGNFTQIERTAFAQATALW-----NEV 54
Query: 66 VDLTFEETSIHSDIKFI----------------------SSNNGYVCTPRYDSRYFMEIN 103
++ F ET++ +D +FI SN V T D + ++
Sbjct: 55 ANINFAETAVQADAEFIESLYVSGADGTSGNLGVHQNFIGSNTTVVDTITIDGTFATALS 114
Query: 104 ---------FDKAD----VWRYGIGKGTILSHNALHEIGHALGLMH--------PGSYNG 142
+D+ + + R GIG TI+ HE+GH LGL H P + G
Sbjct: 115 GSYNRSGFGWDETNANGGLQRGGIGFATIV-----HELGHGLGLDHTHITGSNDPHFFPG 169
Query: 143 GYPVYGVDNDYENDSFLTSVMSY-----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
Y N+ N S L S+MSY P ++G PM DI VQ +YGA
Sbjct: 170 APGEYDAGNNGLN-SELYSIMSYRSGPEIRPNFIGETQNYGTVGGPMAFDIATVQFLYGA 228
Query: 198 PKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESW----- 250
+ G+++Y + + I+D+GG D + + GG IDL +
Sbjct: 229 NMTTRTGDDVYTMPSANAPGTYWSAIWDAGGTDTI--SHAGGTAAVTIDLRAATLQDEVG 286
Query: 251 -----SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S +G TIA VIE+ G D ++GN+A N +G D G +G D
Sbjct: 287 GGGFISRVGTIYGGYTIANGVVIENATGGQAADTLVGNAAANALDGGAGADTMTGGAGDD 346
>gi|330875264|gb|EGH09413.1| metalloprotease [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 535
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 124/283 (43%), Gaps = 65/283 (22%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGY--VCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V D+TF E DI+F G+ + + Y Y DVW IG
Sbjct: 82 WSAVADITFTEVKDTPDNVGDIRF----GGFQGLQSLEYGQAYAPGTLGRSGDVW---IG 134
Query: 116 ---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
KGT +HE GHALGL H S+ G Y +D +E+ + ++MSY
Sbjct: 135 PKVNAADPAKGTDDYLTFMHETGHALGLKH--SFEGTQYNDVLLDAKFEDARY--TIMSY 190
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F P TPM+ D+ A+Q IYGA GN++YK D
Sbjct: 191 TNNYSFKP------------TTPMLLDVAAMQFIYGANNSYHTGNDVYK---WAPDQSVF 235
Query: 220 QTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQ 264
+TI+D+GG D +D + VK I+LN +S+IG Y N + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNDNPDAPTLMNSGLAIAY 293
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN NV G D+ G G DT+
Sbjct: 294 GAHIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTY 336
>gi|238623380|emb|CAS06684.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 290
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 52/279 (18%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFI------------------SSNNGYVCT 91
+ A A+ W+ V ++TF E + D +N Y +
Sbjct: 72 LQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTS 131
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGV 149
+ +++ N A++ G HEIGH LGL HPG YN G P Y
Sbjct: 132 GTDGTSWYLINNSYTANI---NPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-R 187
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGN 204
D DY D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA + G+
Sbjct: 188 DADYGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGD 247
Query: 205 NIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 248 TTYGFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFS 286
>gi|330965844|gb|EGH66104.1| metalloprotease [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 535
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 124/283 (43%), Gaps = 65/283 (22%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGY--VCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V D+TF E DI+F G+ + + Y Y DVW IG
Sbjct: 82 WSAVADITFTEVKDTPDNVGDIRF----GGFQGLQSLEYGQAYAPGTLGRSGDVW---IG 134
Query: 116 ---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
KGT +HE GHALGL H S+ G Y +D +E+ + ++MSY
Sbjct: 135 PKVNAADPAKGTDDYLTFMHETGHALGLKH--SFEGTQYNDVLLDAKFEDARY--TIMSY 190
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F P TPM+ D+ A+Q IYGA GN++YK D
Sbjct: 191 TNNYSFKP------------TTPMLLDVAAMQFIYGANNSYHTGNDVYK---WAPDQSVF 235
Query: 220 QTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQ 264
+TI+D+GG D +D + VK I+LN +S+IG Y N + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNDNPDAPTLMNSGLAIAY 293
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN NV G D+ G G DT+
Sbjct: 294 GAHIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTY 336
>gi|238623384|emb|CAS06686.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 291
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 52/279 (18%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFI------------------SSNNGYVCT 91
+ A A+ W+ V ++TF E + D +N Y +
Sbjct: 72 LQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTS 131
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGV 149
+ +++ N A++ G HEIGH LGL HPG YN G P Y
Sbjct: 132 GTDGTSWYLINNSYTANI---NPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-K 187
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGN 204
D DY D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA + G+
Sbjct: 188 DADYGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGD 247
Query: 205 NIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 248 TTYGFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFS 286
>gi|317447665|emb|CBJ55064.1| alkaline metalloprotease [Pseudomonas sp. R-38748]
Length = 292
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 52/279 (18%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFI------------------SSNNGYVCT 91
+ A A+ W+ V ++TF E + D +N Y +
Sbjct: 72 LQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTS 131
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGV 149
+ +++ N A++ G HEIGH LGL HPG YN G P Y
Sbjct: 132 GTDGTSWYLINNSYTANI---NPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-K 187
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGN 204
D DY D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA + G+
Sbjct: 188 DADYGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGD 247
Query: 205 NIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 248 TTYGFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFS 286
>gi|238623382|emb|CAS06685.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 285
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 52/279 (18%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 6 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 64
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFI------------------SSNNGYVCT 91
+ A A+ W+ V ++TF E + D +N Y +
Sbjct: 65 LQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTS 124
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGV 149
+ +++ N A++ G HEIGH LGL HPG YN G P Y
Sbjct: 125 GTDGTSWYLINNSYTANI---NPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-K 180
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGN 204
D DY D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA + G+
Sbjct: 181 DADYGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGD 240
Query: 205 NIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 241 TTYGFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFS 279
>gi|320328779|gb|EFW84778.1| metalloprotease, putative [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330881974|gb|EGH16123.1| metalloprotease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 535
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 124/283 (43%), Gaps = 65/283 (22%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGY--VCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V D+ F E DI+F G+ + + Y Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF----GGFKSLQSTEYGQAYAPGTLGRSGDVW---IG 134
Query: 116 ---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 135 PKVNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSY 190
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F P TPM+ D+ A+Q IYGA GN++YK D
Sbjct: 191 TNNYSFKP------------TTPMLLDVAAMQFIYGANTSYHTGNDVYK---WAPDQSVF 235
Query: 220 QTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQ 264
+TI+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAY 293
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGNS +NV G D G G DT+
Sbjct: 294 GAHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTY 336
>gi|330890304|gb|EGH22965.1| metalloprotease [Pseudomonas syringae pv. mori str. 301020]
Length = 535
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 124/283 (43%), Gaps = 65/283 (22%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGY--VCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V D+ F E DI+F G+ + + Y Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF----GGFKSLQSTEYGQAYAPGTLGRSGDVW---IG 134
Query: 116 ---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 135 PKVNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSY 190
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F P TPM+ D+ A+Q IYGA GN++YK D
Sbjct: 191 TNNYSFKP------------TTPMLLDVAAMQFIYGANTSYHTGNDVYK---WAPDQSVF 235
Query: 220 QTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQ 264
+TI+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAY 293
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGNS +NV G D G G DT+
Sbjct: 294 GAHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTY 336
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q + G D L + V IDLN ++ +
Sbjct: 329 GGLGNDTYVID-QAGELALVQEKANEGIDTLKITYDNTSPVATVIDLNAGPLANF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +++G+ N+ + GN ANNV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGEF-TLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + + ++ D N + D LS
Sbjct: 443 ---NDLAEMGKGHASDVITDFNSQQGDKLS 469
>gi|238623348|emb|CAS06668.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 251
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSN----------YFIRYKPDVLTTHRLSFDITELNPNA 51
N KP TT++ AD L R W + Y P V R ++ +
Sbjct: 10 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSSLQ 69
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A +L W+ V +TF E + H S++NG Y+ + +
Sbjct: 70 KEQAMLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESWY 129
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D +V + G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 130 LINKDY-EVNK-SPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 186
Query: 159 LTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGA 197
SVMSY+ ++ Y + P++ DI AVQK+YGA
Sbjct: 187 AYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGA 229
>gi|71733556|ref|YP_274399.1| metalloprotease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|289627442|ref|ZP_06460396.1| metalloprotease, putative [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|71554109|gb|AAZ33320.1| metalloprotease, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320324669|gb|EFW80743.1| metalloprotease, putative [Pseudomonas syringae pv. glycinea str.
B076]
gi|330866689|gb|EGH01398.1| metalloprotease [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 535
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 124/283 (43%), Gaps = 65/283 (22%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGY--VCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V D+ F E DI+F G+ + + Y Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF----GGFKSLQSTEYGQAYAPGTLGRSGDVW---IG 134
Query: 116 ---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 135 PKVNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSY 190
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F P TPM+ D+ A+Q IYGA GN++YK D
Sbjct: 191 TNNYSFKP------------TTPMLLDVAAMQFIYGANTSYHTGNDVYK---WAPDQSVF 235
Query: 220 QTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQ 264
+TI+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAY 293
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGNS +NV G D G G DT+
Sbjct: 294 GAHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTY 336
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q + G D L + V IDLN ++ +
Sbjct: 329 GGLGNDTYVID-QAGELALVQEKANEGIDTLKITYDNTSPVATVIDLNAGPLANF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +++G+ N+ + GN ANNV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGEF-TLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + + ++ D N + D LS
Sbjct: 443 ---NDLAEMGKGHASDVITDFNSQQGDKLS 469
>gi|298486731|ref|ZP_07004787.1| Ca2+-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298158598|gb|EFH99662.1| Ca2+-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 535
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 124/283 (43%), Gaps = 65/283 (22%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGY--VCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V D+ F E DI+F G+ + + Y Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF----GGFKSLQSTEYGQAYAPGTLGRSGDVW---IG 134
Query: 116 ---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 135 PKVNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSY 190
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F P TPM+ D+ A+Q IYGA GN++YK D
Sbjct: 191 TNNYSFKP------------TTPMLLDVAAMQFIYGANTSYHTGNDVYK---WAPDQSVF 235
Query: 220 QTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQ 264
+TI+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAY 293
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGNS +NV G D G G DT+
Sbjct: 294 GAHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTY 336
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q + G D L + V IDLN ++ +
Sbjct: 329 GGLGNDTYVID-QAGELALVQEKANEGIDTLKITYDNTSPVATVIDLNAGPLANF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +++G+ N+ +IGN ANNV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGEF-TLLGNDRNNTLIGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + + ++ D N + D LS
Sbjct: 443 ---NDLAEMGKGHASDVITDFNSQQGDKLS 469
>gi|257485207|ref|ZP_05639248.1| metalloprotease, putative [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|330987388|gb|EGH85491.1| metalloprotease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010894|gb|EGH90950.1| metalloprotease [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 535
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 124/283 (43%), Gaps = 65/283 (22%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGY--VCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V D+ F E DI+F G+ + + Y Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF----GGFKSLQSTEYGQAYAPGTLGRSGDVW---IG 134
Query: 116 ---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 135 PKVNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSY 190
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F P TPM+ D+ A+Q IYGA GN++YK D
Sbjct: 191 TNNYSFKP------------TTPMLLDVAAMQFIYGANTSYHTGNDVYK---WAPDQSVF 235
Query: 220 QTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQ 264
+TI+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAY 293
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGNS +NV G D G G DT+
Sbjct: 294 GAHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTY 336
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q + G D L + V IDLN E ++ +
Sbjct: 329 GGLGNDTYVID-QAGELALVQEKANEGIDTLKITYDNTSPVATVIDLNAEPLANF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +++G+ N+ + GN ANNV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGEF-TLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + + ++ D N + D LS
Sbjct: 443 ---NDLAEMGKGHASDVITDFNSQQGDKLS 469
>gi|237801271|ref|ZP_04589732.1| metalloprotease [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024130|gb|EGI04187.1| metalloprotease [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 535
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 122/302 (40%), Gaps = 65/302 (21%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKF------ISSNNGYVCTP 92
D L + AR ALG WS V D+ F E DI+F + G P
Sbjct: 63 DAYSLTTAQMDAARSALGAWSAVADIKFTEVQDTPDNVGDIRFGGFKGLKGTELGQAYAP 122
Query: 93 RYDSRYFMEINFDKADVW------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
R DVW GKGT +HE GHALGL H Y
Sbjct: 123 GTLGR--------SGDVWIGPDVDAAVPGKGTPDYLTFMHETGHALGLKHSFEET-QYND 173
Query: 147 YGVDNDYENDSFLTSVMSY-----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG- 200
+D +E+ + ++MSY F P TPM+ D+ A+Q IYGA
Sbjct: 174 VLLDAKFEDARY--TIMSYTNKYSFKP------------TTPMLLDVAAMQFIYGANTHY 219
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG---- 255
N++YK D +TI+D+GG D +D + VK I+LN +S+IG
Sbjct: 220 HTENDVYK---WAPDQSVFETIWDAGGKDTIDASNQAAFVK--INLNEGEFSTIGKAFLD 274
Query: 256 ----------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ IA T IE+ +GS+ +D +IGN NV G D G G D
Sbjct: 275 YNHTPDNPTQMNSGLAIAYGTHIENAIGSAFDDTLIGNELANVLDGRGGLDTMIGGLGND 334
Query: 306 TF 307
T+
Sbjct: 335 TY 336
>gi|238623421|emb|CAS06705.1| alkaline metalloprotease [Pseudomonas fluorescens bv. G]
Length = 277
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 97/231 (41%), Gaps = 45/231 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N NAQ
Sbjct: 12 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 71
Query: 53 EVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ A+ W+ V +TF E + D N GY T
Sbjct: 72 QKAQAVLAMQSWADVAKVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 131
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 132 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 182
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGA 197
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 183 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGA 233
>gi|227818410|ref|YP_002822381.1| outer membrane secretion protein [Sinorhizobium fredii NGR234]
gi|227337409|gb|ACP21628.1| putative outer membrane secretion protein [Sinorhizobium fredii
NGR234]
Length = 1113
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 158/369 (42%), Gaps = 65/369 (17%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY-VCT 91
+ L ++ ELN P + A AL W+ V L FE I D F S+ + V +
Sbjct: 46 IAAGTLRINVYELNDHPEYKAAAIGALEMWASVTPLKFE---IVDDAPFDSTTDWMEVVS 102
Query: 92 PR---------YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
P Y S ++ I D G + + +HE GH GL HPG YN
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNY 162
Query: 143 GYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCATPMVSDIVAV----- 191
P GV +Y N++ T SVMSYF D + + + +TP+++DI AV
Sbjct: 163 SGP-GGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETTRWSASTPLMADIEAVIRRFF 220
Query: 192 -------QKIYGAPKGSLGNNIYKI-----------EVQQKDSPFIQTIYDSGGDDLLDL 233
+ Y + + G+N+Y Q D F+ I+D+GG D +D
Sbjct: 221 STVDANGVRTYQHIELNTGDNVYGFGSTQYGYQLTSSGMQHDIGFV--IHDTGGTDTIDF 278
Query: 234 TLIGGVKNYI-DLNTESWSSIGGYEKNMTI-AQHTV------IESVVGSSGNDVVIGNSA 285
+ G I DL +SS+ G+ N++I A H +E+ +GSS +D++IGN
Sbjct: 279 S--GSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADQTDYYVENGIGSSYDDILIGNDG 336
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----NAIIVYDANEHKQDFLSDV 341
N G D G+ G D +F + I R E N ++ + K +++V
Sbjct: 337 ANTLDGRGGGDRMAGNGGDDIYFVDS---WDDIVREEANGGNDTVILLSRHLKIRKIANV 393
Query: 342 ERLRFADQC 350
E + +AD+
Sbjct: 394 ENIIYADES 402
>gi|227820120|ref|YP_002824091.1| protease [Sinorhizobium fredii NGR234]
gi|227339119|gb|ACP23338.1| putative protease [Sinorhizobium fredii NGR234]
Length = 509
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
H LHE+GHALGL H G + + + Y++ + ++ +G
Sbjct: 149 HTLLHELGHALGLKHGHEQEGAFEP--LPSQYDSIEYSIMTYRGYVGGYGYAYEQYGAPQ 206
Query: 182 TPMVSDIVAVQKIYGAP-KGSLGNNIYK-------------IEVQQKDSPFIQTIYDSGG 227
T M++DI A+Q++YGA + GN +YK + + + TI+D GG
Sbjct: 207 TFMMADIAALQEMYGADFSTNSGNTVYKWTPGSGATLVNGAVGIAPGANRIFATIWDGGG 266
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSS--------IGGYEKNMTIA------------QHTV 267
D DLT + IDL S+ +GG + A ++
Sbjct: 267 SDTYDLTAYK-IALKIDLRPGKVSTFSADQLAWLGGGSNDGYAAGNIFNALLYHGDTRSL 325
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+V+G SGND + GN A N + +GND+ +G +G DT +
Sbjct: 326 IENVLGGSGNDAITGNQAANKLYGYAGNDIMNGDTGHDTLY 366
>gi|254562393|ref|YP_003069488.1| hypothetical protein METDI4008 [Methylobacterium extorquens DM4]
gi|254269671|emb|CAX25643.1| conserved hypothetical protein, putative protease-like protein
[Methylobacterium extorquens DM4]
Length = 713
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 112/278 (40%), Gaps = 50/278 (17%)
Query: 126 HEIGHALGLMHP----GSYNGGYPVYGVDNDYENDSFLTSVMSYFM-------PQDSMMD 174
HEIGH+LGL HP G+ G + ++ N S T VMSY P + D
Sbjct: 132 HEIGHSLGLDHPFERPGAIAGVRSEADLGTNFLNSSLYT-VMSYSPFAWGEDNPWTTAKD 190
Query: 175 ASFGY----CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
A + + M DI A+Q +YGA + G+ +Y + + TI+D+GG+D
Sbjct: 191 AGKTFMNASVGSYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTGGNDT 250
Query: 231 LDLTLIGGVKNYIDLNTESWS-SIGG---------YEKNMTIAQHTVIESVVGSS----- 275
+ +G + IDL + IGG IA IE+ +G S
Sbjct: 251 I--RYVGSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETAIGGSKDDIL 308
Query: 276 -------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--- 319
GND + G + N+V +G+D DG G+D + S Y I
Sbjct: 309 HGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGDGIDAARFAGQSRDYAIVYDA 368
Query: 320 -RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+A V D L+ +E L F D ++S V
Sbjct: 369 STTASAFAVKHIATGALDTLASIETLVFDDTALESQGV 406
>gi|307309503|ref|ZP_07589159.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|306900088|gb|EFN30708.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 388
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 99/225 (44%), Gaps = 43/225 (19%)
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY--FMPQDSMMDAS--- 176
H LHE+GHALGL H + VYG + DS SV+SY ++ D+ S
Sbjct: 25 HTHLHELGHALGLKHGHESD----VYGA-TPAQYDSIEYSVLSYRAYVGADTGGSYSYEQ 79
Query: 177 FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK-------------IEVQQKDSPFIQTI 222
FG T M+ DI A+Q++YGA + GN +YK + + + TI
Sbjct: 80 FGAPQTFMMGDIAALQEMYGADFTTNSGNTVYKWTPGSGATFVNGAVGISPGANRIFATI 139
Query: 223 YDSGGDDLLDLT---------LIGGVKNYIDLNTESW---SSIGGYEKNMTIA------- 263
+D GG D DLT L G + ++ +W GG+
Sbjct: 140 WDGGGKDTYDLTAYTTALKVDLRPGKASTFSIDQLAWLDGGPNGGFAAGNVFNALLYRGD 199
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IE+V G S D + GN A NV + +GND +G +G D +
Sbjct: 200 TRSLIENVKGGSAGDAITGNQATNVLWGYAGNDTLNGDTGNDVLY 244
>gi|238623370|emb|CAS06679.1| alkaline metalloprotease [Pseudomonas sp. W15a]
Length = 263
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H ++ ++ N
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDLDGNGKIDLTYTFLTSASSATMNKHGIT-GFSQFNT 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + +Y +
Sbjct: 72 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYH-Q 130
Query: 102 INFDKADVW----RYGIGKGTILS----HNALHEIGHALGLMHPGSYNGGY--PVYGVDN 151
D + Y K L+ HEIGH LGL HPG YN G P Y D
Sbjct: 131 SGLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-KDA 189
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGA 197
DY D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 190 DYGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGA 239
>gi|238623392|emb|CAS06690.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 267
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 97/231 (41%), Gaps = 45/231 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 8 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 67
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ AL W+ V ++TF E + D N GY T
Sbjct: 68 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 127
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 128 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 178
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGA 197
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 179 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGA 229
>gi|307320589|ref|ZP_07600003.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306893739|gb|EFN24511.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 473
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 99/225 (44%), Gaps = 43/225 (19%)
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY--FMPQDSMMDAS--- 176
H LHE+GHALGL H + VYG + DS SV+SY ++ D+ S
Sbjct: 149 HTHLHELGHALGLKHGHESD----VYGA-TPAQYDSIEYSVLSYRAYVGADTGGSYSYEQ 203
Query: 177 FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK-------------IEVQQKDSPFIQTI 222
FG T M+ DI A+Q++YGA + GN +YK + + + TI
Sbjct: 204 FGAPQTFMMGDIAALQEMYGADFTTNSGNTVYKWTPGSGATFVNGAVGISPGANRIFATI 263
Query: 223 YDSGGDDLLDLT---------LIGGVKNYIDLNTESW---SSIGGYEKNMTIAQ------ 264
+D GG D DLT L G + ++ +W GG+
Sbjct: 264 WDGGGKDTYDLTAYTTALKVDLRPGKASTFSIDQLAWLDGGPNGGFAAGNVFNALLYRGD 323
Query: 265 -HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++IE+V G S D + GN A NV + +GND +G +G D +
Sbjct: 324 TRSLIENVKGGSAGDAITGNQATNVLWGYAGNDTLNGDTGNDVLY 368
>gi|289648029|ref|ZP_06479372.1| metalloprotease, putative [Pseudomonas syringae pv. aesculi str.
2250]
Length = 535
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 134/309 (43%), Gaps = 75/309 (24%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGY--VCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V D+ F E DI+F G+ + + Y Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF----GGFKSLQSTEYGQAYAPGTLGRSGDVW---IG 134
Query: 116 ---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 135 PKVNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSY 190
Query: 166 -----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFI 219
F P TPM+ D+ A+Q IYGA GN++YK D
Sbjct: 191 TNNYSFKP------------TTPMLLDVAAMQFIYGANTSYHTGNDVYK---WAPDQSVF 235
Query: 220 QTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGG----YEKN----------MTIAQ 264
+TI+D+GG D +D + VK I+LN +S+IG Y +N + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK--INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAY 293
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-EN 323
IE+ +GS+ ND +IGNS +N V DG GLDT + Y I + E
Sbjct: 294 GAHIENAIGSAFNDTLIGNSLDN---------VLDGRGGLDTMIGGLGNDSYVIDQAGEL 344
Query: 324 AIIVYDANE 332
A++ ANE
Sbjct: 345 ALVQEKANE 353
>gi|317447659|emb|CBJ55061.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 276
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 113/276 (40%), Gaps = 55/276 (19%)
Query: 5 KPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQEV 54
KP YT ++ A LLR+ + ++ K D+ T S + +N N Q+
Sbjct: 4 KPSYTVDQAATQLLREGAAYRDFBGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQK 63
Query: 55 ARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTPRY 94
A+ AL W+ V ++TF E + D N GY T Y
Sbjct: 64 AQAALAMQSWADVANVTFTEKTSGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWY 123
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDND 152
+ N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 124 LTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-DAT 174
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS------- 201
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 175 YGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTY 234
Query: 202 -LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+N + + + +++D GG+D LD +
Sbjct: 235 GFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 270
>gi|197105325|ref|YP_002130702.1| hypothetical protein PHZ_c1862 [Phenylobacterium zucineum HLK1]
gi|196478745|gb|ACG78273.1| hypothetical protein PHZ_c1862 [Phenylobacterium zucineum HLK1]
Length = 737
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 125 LHEIGHALGLMHPGSYNGGYPV-YGVDND-----YENDSFLTSVMSYFMPQDSMMDASF- 177
LHE GHA G+ HP GG + GV + Y+ + + +VMSY + D +
Sbjct: 421 LHEFGHAHGVAHPHDNGGGSEIMLGVSDSSSLGIYDLNQGVYTVMSYNDGWQTHPDGTLE 480
Query: 178 --------GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
G+ T DI +Q YG + G+++Y+IE Q+ S + QTI+D+GG D
Sbjct: 481 FSSKTWGSGWSGTLGAFDIAVLQARYGVHAHNAGDDVYQIESLQRWS-YYQTIWDTGGTD 539
Query: 230 LLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ + GG +IDL + S + G TIA VIE+ G G+D
Sbjct: 540 TIAYS--GGRDAHIDLLAATLDYTPTGGGVVSFVNGVFGGFTIAGGVVIENATGGQGDDA 597
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLD 305
++GN+ N+ +G+D G +G D
Sbjct: 598 LMGNAVGNLLKGGTGDDTLIGRAGDD 623
>gi|332561596|ref|ZP_08415909.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
gi|332274098|gb|EGJ19416.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
Length = 1100
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 137/338 (40%), Gaps = 76/338 (22%)
Query: 29 RYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFE--------------- 71
R + L ++T LN P+ + A AL W+ V L FE
Sbjct: 28 RSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVDDAPFDRATDWMQ 87
Query: 72 ----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
E SD SSN YV + F + DK + Y + + +HE
Sbjct: 88 VVSPEIGEPSDGSAFSSNR-YVSI----GQRFHDTEPDKTALGGY-------VFDSFVHE 135
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCA 181
GH GL HPG YN P GV +Y N++ T SVMSYF D + + S
Sbjct: 136 FGHEFGLNHPGLYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSAT 193
Query: 182 TPMVSDIVAV------------QKIYGAPKGSLGNNIYKI-----------EVQQKDSPF 218
TP+++DI AV + Y + G++IY E Q D F
Sbjct: 194 TPLMADIEAVIRRFFSTVDEDGVRTYQPIDLNTGDDIYGFNSTVFGYELMSEGLQHDIGF 253
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-------AQHTVIES 270
+ I+D+GG D +D + G I DL +SS+ G+ N++I A IE+
Sbjct: 254 V--IHDTGGMDTIDFS--GSTAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEA 309
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+GS D +IGN +NV G D G G DT+F
Sbjct: 310 GIGSRFADTIIGNDGDNVLDGRGGGDRMAGFGGDDTYF 347
>gi|317447648|emb|CBJ55055.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 276
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 97/231 (41%), Gaps = 45/231 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQ 52
N KP YT ++ A LLRD + ++ K D+ T S + +N N Q
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 72
Query: 53 EVARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A+ AL W+ V ++TF E + D N GY T
Sbjct: 73 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 133 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGA 197
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 184 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGA 234
>gi|218532711|ref|YP_002423527.1| heme peroxidase [Methylobacterium chloromethanicum CM4]
gi|218525014|gb|ACK85599.1| Animal heme peroxidase [Methylobacterium chloromethanicum CM4]
Length = 2342
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 154/365 (42%), Gaps = 82/365 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLD-TFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ +G + NN F ++ ND F+G SG D +A + A ++ D
Sbjct: 2006 IFVGGAENNTFTGTARNDSFNGGSGTDRAILNFAFGAALVSVAADGATVI--TGPDGSDT 2063
Query: 338 LSDVERLRFADQCIDSVNVKQRSILE---YTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+E +F+D+ ID N +++ Y + Y D+ ++ H+ E+G EG
Sbjct: 2064 FRGIEVYQFSDRTID--NADGSPLVDDLFYLSRYGDVAAA----GIDADTHYAEYGFREG 2117
Query: 395 RDIT--FDSYLYLGSYDDLRNVFGSDRGAAAR---HYITHGVKEGRNPDA-FKALEYIAS 448
RD F + YL + D+ RGA HY +G +EGR+P F Y A+
Sbjct: 2118 RDPNAFFSTTGYLAANSDV-------RGAGINPLTHYDQYGFREGRDPGVNFDNEAYYAA 2170
Query: 449 HEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFV--------------TFDSYLY-LG 490
+ PD+ G + H+ +G EGR FD+ Y LG
Sbjct: 2171 N----------PDVQAAGLNPLRHYLEYGQGEGRSADEAVGRVADLSAAQGFDAEFYLLG 2220
Query: 491 SYDDLRNVF--GSDRGA-AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ D G D A A HY +G+ EGR+P+A + + ++A+AD V
Sbjct: 2221 NLDVAEAAIAAGGDSFAFALNHYSRYGIAEGRDPNA------LFDTDGYLDAYAD----V 2270
Query: 548 QAGK----DHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQ---HYITHG 598
QA H+ +G EGR SI F+ YL++ D+ ++A HY+ +G
Sbjct: 2271 QAAGINPLTHYIQYGAREGRDPSIEFDTTAYLSANQDV-------QAAGLNPMLHYLQYG 2323
Query: 599 MKEGR 603
+ EGR
Sbjct: 2324 LYEGR 2328
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 32/163 (19%)
Query: 380 FESMKHFYEFGLSEGR----------DIT----FDSYLYL-GSYDDLRNVF--GSDRGA- 421
++H+ E+G EGR D++ FD+ YL G+ D G D A
Sbjct: 2179 LNPLRHYLEYGQGEGRSADEAVGRVADLSAAQGFDAEFYLLGNLDVAEAAIAAGGDSFAF 2238
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR- 479
A HY +G+ EGR+P+A F Y+ ++ D+ A + H+ +G EGR
Sbjct: 2239 ALNHYSRYGIAEGRDPNALFDTDGYLDAYADVQAAGINP-------LTHYIQYGAREGRD 2291
Query: 480 -FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ FD+ YL + D++ + HY+ +G+ EGR P
Sbjct: 2292 PSIEFDTTAYLSANQDVQAAGLN----PMLHYLQYGLYEGRLP 2330
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G++GND++ G N+ +G+D DG +G D + P + + ++V
Sbjct: 1602 DTLNGNAGNDILNGAGGNDTLNGGAGDDRLDGGTGTDVAVFAGPVGNFALGSSGTNLVVT 1661
Query: 329 D-ANEHKQDFLSDVERLRFA 347
D D LS +E LRFA
Sbjct: 1662 DLTGAEGTDTLSTIETLRFA 1681
>gi|218528172|ref|YP_002418988.1| heme peroxidase [Methylobacterium chloromethanicum CM4]
gi|218520475|gb|ACK81060.1| Animal heme peroxidase [Methylobacterium chloromethanicum CM4]
Length = 2342
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 153/365 (41%), Gaps = 82/365 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLD-TFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ +G + NN F ++ ND F+G G D +A + A ++ D
Sbjct: 2006 IFVGGAENNTFTGTARNDSFNGGGGTDRAILNFAFGAALVTVAADGATVI--TGPDGSDT 2063
Query: 338 LSDVERLRFADQCIDSVNVKQRSILE---YTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+E +F+D+ ID N +++ Y + Y D+ ++ H+ E+G EG
Sbjct: 2064 FRGIEAYQFSDRTID--NADGSPLVDDLFYLSRYGDVAAA----GIDADTHYAEYGFREG 2117
Query: 395 RDIT--FDSYLYLGSYDDLRNVFGSDRGAAAR---HYITHGVKEGRNPDA-FKALEYIAS 448
RD F + YL + D+ RGA HY +G +EGR+P F Y A+
Sbjct: 2118 RDPNAFFSTTGYLAANSDV-------RGAGINPLTHYDQYGFREGRDPGVNFDNEAYYAA 2170
Query: 449 HEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFV--------------TFDSYLY-LG 490
+ PD+ G + H+ +G EGR FD+ Y LG
Sbjct: 2171 N----------PDVQAAGLNPLRHYLEYGQGEGRSADEAVGRVADLGAAQGFDAEFYLLG 2220
Query: 491 SYDDLRNVF--GSDRGA-AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ D G D A A HY +G+ EGR+P+A + + ++A+AD V
Sbjct: 2221 NLDVAEAAIAAGGDSFAFALNHYSRYGIAEGRDPNA------LFDTDGYLDAYAD----V 2270
Query: 548 QAGK----DHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQ---HYITHG 598
QA H+ +G EGR SI F+ YL++ D+ ++A HY+ +G
Sbjct: 2271 QAAGINPLTHYIQYGAREGRDPSIEFDTTAYLSANQDV-------QAAGLNPMLHYLQYG 2323
Query: 599 MKEGR 603
+ EGR
Sbjct: 2324 LYEGR 2328
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 380 FESMKHFYEFGLSEGRDI--------------TFDSYLYL-GSYDDLRNVF--GSDRGA- 421
++H+ E+G EGR FD+ YL G+ D G D A
Sbjct: 2179 LNPLRHYLEYGQGEGRSADEAVGRVADLGAAQGFDAEFYLLGNLDVAEAAIAAGGDSFAF 2238
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR- 479
A HY +G+ EGR+P+A F Y+ ++ D+ A + H+ +G EGR
Sbjct: 2239 ALNHYSRYGIAEGRDPNALFDTDGYLDAYADVQAAGINP-------LTHYIQYGAREGRD 2291
Query: 480 -FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ FD+ YL + D++ + HY+ +G+ EGR P
Sbjct: 2292 PSIEFDTTAYLSANQDVQAAGLN----PMLHYLQYGLYEGRLP 2330
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G++GND++ G N+ +G+D DG +G D + P + + ++V
Sbjct: 1602 DTLNGNAGNDILNGAGGNDTLNGGAGDDRLDGGTGTDVAVFAGPVGNFALGSSGTNLVVT 1661
Query: 329 D-ANEHKQDFLSDVERLRFA 347
D D LS +E LRFA
Sbjct: 1662 DLTGAEGTDTLSTIETLRFA 1681
>gi|77404637|ref|YP_345211.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77390287|gb|ABA81470.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 1112
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 137/338 (40%), Gaps = 76/338 (22%)
Query: 29 RYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFE--------------- 71
R + L ++T LN P+ + A AL W+ V L FE
Sbjct: 40 RSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVDDAPFDRATDWME 99
Query: 72 ----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
E SD SSN YV + F + DK + Y + + +HE
Sbjct: 100 VVSPEIGEPSDGSAFSSNR-YVSI----GQRFHDTEPDKTALGGY-------VFDSFVHE 147
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCA 181
GH GL HPG YN P GV +Y N++ T SVMSYF D + + S
Sbjct: 148 FGHEFGLNHPGLYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSAT 205
Query: 182 TPMVSDIVAV------------QKIYGAPKGSLGNNIYKI-----------EVQQKDSPF 218
TP+++DI AV + Y + G++IY E Q D F
Sbjct: 206 TPLMADIEAVIRRFFSTVDEDGVRTYQTIDLNTGDDIYGFNSSVFGYELMSEGLQHDIGF 265
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-------AQHTVIES 270
+ I+D+GG D +D + G I DL +SS+ G+ N++I A IE+
Sbjct: 266 V--IHDTGGMDTIDFS--GSTAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEA 321
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+GS D +IGN +NV G D G G DT+F
Sbjct: 322 GIGSRFADTLIGNDGDNVLDGRGGGDRMAGFGGDDTYF 359
>gi|238623368|emb|CAS06678.1| alkaline metalloprotease [Pseudomonas sp. W30a]
Length = 284
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 112/278 (40%), Gaps = 55/278 (19%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNPNA---------- 51
N KP YT ++ A LLRD + ++ K D+ T S + +N +
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 72
Query: 52 -QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTP 92
+ A A+ WS V ++TF E + D N GY T
Sbjct: 73 QKAQAALAMQSWSDVANVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
Y + N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 133 WYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGEGAPTY-KD 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNN 205
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + G+
Sbjct: 184 ATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDT 243
Query: 206 IYK---------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
Y + + +++D GG+D LD +
Sbjct: 244 TYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 281
>gi|197105378|ref|YP_002130755.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
gi|196478798|gb|ACG78326.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
Length = 662
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 82/203 (40%), Gaps = 23/203 (11%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HEIGHALGL HP G+P D ++ ++ P + Y PM
Sbjct: 139 VHEIGHALGLKHPHDTPNGFPAADSAVDAVAETIMSYRSYVGGPMGGYSLQAGSYPVGPM 198
Query: 185 VSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
SDI A+Q +YG + G+ Y + S Q ++D GG D + +I
Sbjct: 199 PSDIAAIQHLYGPNWATNAGDTTYTFDPSA--SVIFQAVWDGGGTDTYNFASYA-ADLHI 255
Query: 244 DLNTESWSSIGGYEKNMTIAQHTV-------------------IESVVGSSGNDVVIGNS 284
DL WS +GG + ++ IE+ VG SG+D + GN
Sbjct: 256 DLRAGEWSDLGGQYAVLDTGDASIRPSGNVANPHLYQGDLRSLIENAVGGSGDDTLTGNQ 315
Query: 285 ANNVFFESSGNDVFDGSSGLDTF 307
A N +G+D G G DT
Sbjct: 316 AANTLTGGAGDDSLVGGDGADTL 338
>gi|221218286|ref|YP_002524313.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
gi|221163313|gb|ACM04279.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
Length = 1100
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 137/338 (40%), Gaps = 76/338 (22%)
Query: 29 RYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFE--------------- 71
R + L ++T LN P+ + A AL W+ V L FE
Sbjct: 28 RSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVDDAPFDRATDWME 87
Query: 72 ----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
E SD SSN YV + F + DK + Y + + +HE
Sbjct: 88 VVSPEIGEPSDGSAFSSNR-YVSI----GQRFHDTEPDKTALGGY-------VFDSFVHE 135
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFGYCA 181
GH GL HPG YN P GV +Y N++ T SVMSYF D + + S
Sbjct: 136 FGHEFGLNHPGLYNYSGP-GGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSAT 193
Query: 182 TPMVSDIVAV------------QKIYGAPKGSLGNNIYKI-----------EVQQKDSPF 218
TP+++DI AV + Y + G++IY E Q D F
Sbjct: 194 TPLMADIEAVIRRFFSTVDEDGVRTYQPIDLNTGDDIYGFNSSVFGYELMSEGLQHDIGF 253
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-------AQHTVIES 270
+ I+D+GG D +D + G I DL +SS+ G+ N++I A IE+
Sbjct: 254 V--IHDTGGMDTIDFS--GSTAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEA 309
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+GS D +IGN +NV G D G G DT+F
Sbjct: 310 GIGSRFADTLIGNDGDNVLDGRGGGDRMAGFGGDDTYF 347
>gi|307300794|ref|ZP_07580569.1| Serralysin [Sinorhizobium meliloti BL225C]
gi|306904328|gb|EFN34913.1| Serralysin [Sinorhizobium meliloti BL225C]
Length = 551
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 124/315 (39%), Gaps = 73/315 (23%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTF----EETSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
LN Q R +L ++S V ++TF E + H+D++ SS+ P YF
Sbjct: 56 LNAAQQAATRASLDQFSSVANVTFTEITESVTKHADLRLASSD-----APSTAWAYFPST 110
Query: 103 NFDKADVW-RYGIG------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ D W G KG LHE GHALGL H N PV
Sbjct: 111 AAEGGDAWFNKSSGHYSRPVKGNYAYVTFLHETGHALGLEHAHEGNV-MPV-------NR 162
Query: 156 DSFLTSVMSY-----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG-NNIYK- 208
DS +VMSY + ++GY + M+ DI A+Q +YGA + N Y+
Sbjct: 163 DSMEYTVMSYRSYVGASTTTGYTNETWGYAQSLMMYDIAALQHMYGADFTTHSENTTYRW 222
Query: 209 --------IEVQQKDSP----FIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWS 251
+ + +P + T++D GG D D + NY +DL W+
Sbjct: 223 SPTSGEMFVNGMGQGAPGGNKILLTVWDGGGTDTYDFS------NYTTALKVDLRPGEWT 276
Query: 252 SIGGYE-------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + N+ A ++IE+ G +GND + GN+A N + +
Sbjct: 277 TTSAAQLAKLHYDGSKVAIGNIANALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGN 336
Query: 293 SGNDVFDGSSGLDTF 307
GND G G D
Sbjct: 337 GGNDRLIGGDGNDNL 351
>gi|330969859|gb|EGH69925.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 535
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 128/294 (43%), Gaps = 62/294 (21%)
Query: 50 NAQEVA-RWALGEWSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINF 104
+AQ VA + AL WS V D+ F E DI+F G T + Y
Sbjct: 69 DAQAVAAKSALDAWSAVADIKFTEVQDTPDNVGDIRF-GGFKGLQGT-EFGQAYAPGTLG 126
Query: 105 DKADVWRYGIG---------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
DVW IG KGT +HE GHALGL H S+ Y +D +E
Sbjct: 127 RSGDVW---IGPNVNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFE 181
Query: 155 NDSFLTSVMSY-----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYK 208
+ + ++MSY F P TPM+ D+ A+Q IYGA G+++YK
Sbjct: 182 DARY--TIMSYTNNYSFKP------------TTPMLLDVAAMQFIYGANTHYHTGDDVYK 227
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGG----YEKN---- 259
Q +TI+D+GG D +D + VK I+LN +S+IG Y N
Sbjct: 228 WAPGQS---VFETIWDAGGKDTIDASNQEASVK--INLNEGEFSTIGKAFLDYNANPDAP 282
Query: 260 ------MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ IA IE+ +GS+ ND +IGN +NV G D G G DT+
Sbjct: 283 TSMNSGLAIAYGAHIENAIGSAFNDTLIGNDLDNVLNGRGGLDTMIGGLGNDTY 336
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q D G D L + + I+LN + ++ +
Sbjct: 329 GGLGNDTYVID-QAGELDLVQEKADQGVDTLKITYDNTSPIAQVINLNAGTLANF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +V+G+ N+ + GN A+NV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGAF-TVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + N+ ++ D N + D LS
Sbjct: 443 ---NDLSEMGKGHNSDVITDFNSQQGDKLS 469
>gi|317447646|emb|CBJ55054.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 273
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 110/276 (39%), Gaps = 55/276 (19%)
Query: 5 KPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQEV 54
+P YT ++ A LLR + ++ K D+ T S + +N N Q+
Sbjct: 3 QPSYTVDQAATQLLRXGAAYRDFXGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQK 62
Query: 55 ARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTPRY 94
A+ AL W+ V ++TF E + D N GY T Y
Sbjct: 63 AQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWY 122
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDND 152
+ N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 123 LTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-DAT 173
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + +
Sbjct: 174 YGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTY 233
Query: 209 ----------IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ + +++D GG+D LD +
Sbjct: 234 GFNSNTGRDFLSASSNADKLVFSVWDGGGNDTLDFS 269
>gi|296533583|ref|ZP_06896151.1| glycerophosphodiester phosphodiesterase [Roseomonas cervicalis ATCC
49957]
gi|296266091|gb|EFH12148.1| glycerophosphodiester phosphodiesterase [Roseomonas cervicalis ATCC
49957]
Length = 690
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 135/345 (39%), Gaps = 74/345 (21%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G G+DV+ G +++ GND DG G DT P Y + ++
Sbjct: 367 IEGGDGDDVLYGEQGDDMLIGGLGNDTLDGGEGRDTVVLSGPLASYSFDVVDG--LLQAV 424
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKHFYEF 389
L +E LRFAD + + Q L Y D+ Q G D+ H+ +F
Sbjct: 425 GPDGTTTLRAIELLRFADGTVALDAMAQGFDALSYALINADVWQA-GVDL---RAHYDQF 480
Query: 390 GLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAA-----RHYITHGVKEGR-NPDAFK 441
G EGRD + F + YL + D+ AAA +HY+ +G +EGR F
Sbjct: 481 GWREGRDPSGLFSTEAYLANNADV---------AAAGINPLQHYLQYGSQEGRLTSPWFD 531
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+Y+A + D+ A D P L H+ G EGR F V G
Sbjct: 532 GRDYLARNADVAEAGVD-PML------HYLTNGFLEGRVALF--------------VIGR 570
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D GA DAF A Y ++ D+ A DA + H+ +G E
Sbjct: 571 DIGA----------------DAFDATFYRLANADVARAGIDA-------RAHYEQYGRAE 607
Query: 562 GRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
GR F + YL D+ G D A HY+ G +EGR+
Sbjct: 608 GRDANAYFEGETYLALNADVAAA-GVDPLA---HYLADGWREGRS 648
>gi|317447643|emb|CBJ55052.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 275
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 113/276 (40%), Gaps = 55/276 (19%)
Query: 5 KPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLSFDITELNP---------NAQEV 54
+P YT ++ A LLR+ + ++ K D+ T S + +N N Q+
Sbjct: 3 QPSYTVDQAATQLLREGAAYRDFBGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQK 62
Query: 55 ARWALG--EWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCTPRY 94
A+ AL W+ V ++TF E + D N GY T Y
Sbjct: 63 AQAALAMQSWADVANVTFTEKTSGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWY 122
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDND 152
+ N D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 123 LTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-DAT 173
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS------- 201
Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 174 YGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTY 233
Query: 202 -LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+N + + + +++D GG+D LD +
Sbjct: 234 GFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFS 269
>gi|332705045|ref|ZP_08425130.1| matrixin [Lyngbya majuscula 3L]
gi|332356222|gb|EGJ35677.1| matrixin [Lyngbya majuscula 3L]
Length = 1485
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 106/230 (46%), Gaps = 62/230 (26%)
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDND------YENDSFLTSVMSYFMPQDSMMDASF 177
+HEIGH+LGL HP Y DND + D+ +VMSY S +
Sbjct: 140 VIHEIGHSLGLKHPNPYE--------DNDHGPFLPFNEDNTTNTVMSYNFAGKSAI---- 187
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI----------EVQQKDSPF---IQTIYD 224
TPM+ DI A+Q IYGA + + G+ Y E K P QT++D
Sbjct: 188 ----TPMIYDIQALQSIYGAREYNHGDTTYSFDSVNYYTDGSEYYGKTKPIEEIKQTLWD 243
Query: 225 SGGDDLLD---LTLI----------GGV----KNYIDLNTESWSSIGGYEK-----NMTI 262
SGG + LD LT + GG+ + Y D + ++ S G E I
Sbjct: 244 SGGVNTLDFSNLTFVEKGYHFDMNEGGILTTQEAYNDSSYKARSDDSGREYVTSEFGTAI 303
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVF--FE---SSGNDVFDGSSGLDTF 307
A TV E+++ S+ ND +I NSA N+F +E S+G+D+ G + LDT
Sbjct: 304 AFGTVFENLINSNSNDYIIANSAANIFSGYELEISTGDDLIKGWNYLDTL 353
>gi|84686282|ref|ZP_01014177.1| Hemolysin-type calcium-binding toxin [Maritimibacter alkaliphilus
HTCC2654]
gi|84665809|gb|EAQ12284.1| Hemolysin-type calcium-binding toxin [Rhodobacterales bacterium
HTCC2654]
Length = 463
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 124/271 (45%), Gaps = 24/271 (8%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLTFEETSIHSD-------IKFISSNNGYVCTPRYDSR 97
T +P+ + V R+ L +++ F E S + D + G + P+Y S
Sbjct: 52 TAFSPDEKSVVRFLLETVETFLNVDFVEVSGNRDPDLNLGKVTMFPGTAG-LGGPQYSSS 110
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
FD V+ I + + LHEIGHA+GL H ++ G +D Y+N
Sbjct: 111 GTRITAFDGFAVFNNTIDLSSGRQNLILHEIGHAMGLDH--TFEGAR----LDPAYDNLH 164
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+ S+MSY +DA+ M D++A+Q I+GA + G Y + +
Sbjct: 165 Y--SLMSYDADPTPGIDATIRM----MAYDMLALQDIWGAATYNDGATSYA--GPRLGAG 216
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ ++DSGG D +D + G ++DL +S G E +M +A +TVIE+ GS+
Sbjct: 217 KVDVVWDSGGTDWMDASAWG-RPVHLDLGEGMFSRWFGTE-DMVVAFNTVIENARGSAFA 274
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
D VIGN N F G D+ G G DT +
Sbjct: 275 DTVIGNDYANRLFGGGGGDLVRGRKGADTVY 305
>gi|16262469|ref|NP_435262.1| protease [Sinorhizobium meliloti 1021]
gi|14523072|gb|AAK64674.1| Serralysin-like metalloprotease [Sinorhizobium meliloti 1021]
Length = 551
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 124/315 (39%), Gaps = 73/315 (23%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTF----EETSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
L+ Q R AL ++S V ++TF E + H+D++ SS+ P YF
Sbjct: 56 LSGAQQAATRAALDQFSSVANVTFTEITESATKHADLRLASSD-----APSTAWAYFPST 110
Query: 103 NFDKADVW-RYGIG------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ D W G KG LHE GHALGL H N PV
Sbjct: 111 AAEGGDAWFNKSSGHYSRPVKGNYAYVTFLHETGHALGLEHAHEGNV-MPV-------NR 162
Query: 156 DSFLTSVMSY-----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG-NNIYK- 208
DS +VMSY + ++GY + M+ DI A+Q +YGA + N Y+
Sbjct: 163 DSMEYTVMSYRSYVGASTTTGYTNETWGYAQSLMMYDIAALQHMYGADFTTHSENTTYRW 222
Query: 209 --------IEVQQKDSP----FIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWS 251
+ + +P + T++D GG D D + NY +DL W+
Sbjct: 223 SPTSGEMFVNGMGQGAPGGNKILLTVWDGGGTDTYDFS------NYTTALKVDLRPGEWT 276
Query: 252 SIGGYE-------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + N+ A ++IE+ G +GND + GN+A N + +
Sbjct: 277 TTSAAQLAKLHYDGSKVAIGNIANALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGN 336
Query: 293 SGNDVFDGSSGLDTF 307
GND G G D
Sbjct: 337 GGNDRLIGGDGNDNL 351
>gi|238623410|emb|CAS06699.1| alkaline metalloprotease [Pseudomonas chlororaphis subsp.
chlororaphis]
Length = 284
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 108/281 (38%), Gaps = 61/281 (21%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP YT ++ A +LRD + + + H +S ++ +
Sbjct: 11 NGKPSYTVDQAATQILRDGAAYQDLNGSGKIELTYTFLTSASSSTMYKHGIS-GFSQFSA 69
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYVCT 91
+ A ++ W+ V ++TF E + D N GY T
Sbjct: 70 QQKAQAVLSMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 129
Query: 92 PRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVY 147
Y +S Y N D + R HEIGH LGL HPG YN G P Y
Sbjct: 130 SWYLINSSYTQNKNPDLNNYGR----------QTLTHEIGHTLGLAHPGDYNAGNGNPTY 179
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASF----GYCATPMVSDIVAVQKIYGAPKG--- 200
D Y D+ SVMSY+ ++ + S Y + P++ DI A+QK+YGA
Sbjct: 180 N-DATYGQDTRGYSVMSYWSESNTSQNFSKAGVEAYSSGPLMDDIAAIQKLYGANTTTRT 238
Query: 201 -----SLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+N + + + +++D+GG D LD +
Sbjct: 239 GDTTYGFNSNTGRDFLSATSSADKLVFSVWDAGGKDTLDFS 279
>gi|163737436|ref|ZP_02144853.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
BS107]
gi|161388962|gb|EDQ13314.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
BS107]
Length = 482
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY----FMPQDSMMDASFGYC 180
LHE+GHALGL H +++ P E DS L SVMSY QDS DA
Sbjct: 215 LHELGHALGLQH--THDSNLP-------EEYDSNLYSVMSYRENPLNGQDS--DAM---- 259
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
M+ D++A+Q I+GA + GN Y+ + + ++D+GG D + +
Sbjct: 260 ---MLFDVLALQDIWGAADFNTGNTTYR----GSRTDTVDVVWDTGGTDTFNASNRTNAV 312
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+DL +SS + ++TIAQ IE+ +G G D + GN +NN G D G
Sbjct: 313 -ALDLREMHFSSFDA-DSDVTIAQGVTIENAIGGRGRDRITGNDSNNRLVGGGGRDTLRG 370
Query: 301 SSGLDTF 307
G D
Sbjct: 371 DGGNDAL 377
>gi|260426907|ref|ZP_05780886.1| peptidase domain protein [Citreicella sp. SE45]
gi|260421399|gb|EEX14650.1| peptidase domain protein [Citreicella sp. SE45]
Length = 843
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVY-GVDNDYENDSF-----LTSVMSY---FM--PQDSMM 173
+HE+GH LGL HP G V GVD + +F + +VMSY F+ P +
Sbjct: 246 IHELGHGLGLAHPHDTGGTSEVMTGVDGSSDTGTFSLNQGIFTVMSYNSSFVEGPVGTPA 305
Query: 174 -DASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
D + G + M DI +Q+ YGA P GN +Y ++ D+ + IYD GG D
Sbjct: 306 PDTNSGSMGSFMAFDIALLQQKYGANPNTGSGNTVYTLD---DDTSYWLAIYDVGGTD-- 360
Query: 232 DLTLI--GGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T++ IDL S S+I G TIA TVIE+ G + D
Sbjct: 361 --TIVNDSNTAATIDLRAASLLFEAGGGGFASAIDGIAGGFTIANGTVIENATGGAAGDT 418
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ GN+ NV +GND G G DT
Sbjct: 419 LSGNAIANVLVGLAGNDTIFGRRGHDTI 446
>gi|254474734|ref|ZP_05088120.1| secreted protease B [Ruegeria sp. R11]
gi|214028977|gb|EEB69812.1| secreted protease B [Ruegeria sp. R11]
Length = 438
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
LHEIGHA+GL H N P ++EN+ L +VMSY + +D+ M
Sbjct: 142 LHEIGHAMGLQHSFEANPALPA-----EFENN--LYTVMSYSPNPINGLDSD-----AMM 189
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYI 243
+ D++A+Q I+GA + + GN Y + + I+D+GG D D + GV+ +
Sbjct: 190 LFDVIALQDIWGAAQYNSGNTTYS----GARTDTVDLIWDTGGVDTFDASDRSSGVR--L 243
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL ++SS + ++ I IE+ +G G D + GN +NN G D G +G
Sbjct: 244 DLRQMAFSSFDA-DSDVVIGHGVTIENAIGGLGRDRLTGNGSNNQLTGGRGRDTLLGQTG 302
Query: 304 LDTF 307
D+
Sbjct: 303 NDSL 306
>gi|238623404|emb|CAS06696.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 280
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 42/232 (18%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFI------------------SSNNGYVCT 91
+ A A+ W+ V ++TF E + D +N Y +
Sbjct: 72 LQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTS 131
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGV 149
+ +++ N A++ G HEIGH LGL HPG YN G P Y
Sbjct: 132 GTDGTSWYLINNSYTANI---NPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-K 187
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGA 197
D DY D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA
Sbjct: 188 DADYGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGA 239
>gi|302185690|ref|ZP_07262363.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae 642]
Length = 535
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 122/281 (43%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIHSD----IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-- 115
WS V D+ F E +D I+F G T + Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTADNVGDIRF-GGFKGLQGT-EFGQAYAPGTLGRSGDVW---IGPK 136
Query: 116 -------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 137 VNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA G+++YK Q +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFET 237
Query: 222 IYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + + VK I+LN +S+IG Y N + IA
Sbjct: 238 IWDAGGKDTIDASNQLASVK--INLNEGEFSTIGKAFLDYNANPDAPTLMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN +NV G D G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNDLDNVLNGRGGVDTMIGGLGNDTY 336
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q D G D L + + I+LN + + +
Sbjct: 329 GGLGNDTYVID-QAGELDLVQEKADQGTDTLKITYDNTSPIAQVINLNAGTLVNF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +++G+ N+ + GN A+NV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGAF-TLLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + N+ ++ D N + D LS
Sbjct: 443 ---NDLSEMGKGHNSDVITDFNSQQGDKLS 469
>gi|238623402|emb|CAS06695.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 274
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 17/125 (13%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----Y 179
HEIGH LGL HPG YN G P Y D DY D+ SVMSY+ ++ + + G Y
Sbjct: 147 HEIGHTLGLDHPGDYNAGTGNPSY-RDADYGQDTRGYSVMSYWGENNTNQNFTKGGVEAY 205
Query: 180 CATPMVSDIVAVQKIYGAPKGS-LGNNIY---------KIEVQQKDSPFIQTIYDSGGDD 229
+ P++ DI A+QK+YGA + G+ Y + + +++D GG+D
Sbjct: 206 ASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTGRDHLSATSNADKLVFSVWDGGGND 265
Query: 230 LLDLT 234
LD +
Sbjct: 266 TLDFS 270
>gi|163740883|ref|ZP_02148276.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
2.10]
gi|161385874|gb|EDQ10250.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
2.10]
Length = 409
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY----FMPQDSMMDASFGYC 180
LHE+GHALGL H +++ P E DS L SVMSY QDS DA
Sbjct: 142 LHELGHALGLQH--THDSNLP-------EEYDSNLYSVMSYRENPLNGQDS--DAM---- 186
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
M+ D++A+Q I+GA + N Y+ + + ++D+GG D + +
Sbjct: 187 ---MLFDVLALQDIWGAADFNTSNTTYR----GSRTDTVDVVWDTGGTDTFNASNRTNAV 239
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+DL +SS + ++TIAQ IE+ +G G D + GN ANN G D G
Sbjct: 240 T-LDLREMHFSSFDA-DSDVTIAQGVTIENAIGGRGRDRITGNDANNRLVGGGGRDTLRG 297
Query: 301 SSGLDTF 307
G D
Sbjct: 298 DGGNDAL 304
>gi|84686280|ref|ZP_01014175.1| protease PrtA [Maritimibacter alkaliphilus HTCC2654]
gi|84665807|gb|EAQ12282.1| protease PrtA [Rhodobacterales bacterium HTCC2654]
Length = 415
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 39/204 (19%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT---SVMSYFM 167
RYG+ LHEIGHALGL H D+D D F T S+M+Y
Sbjct: 142 RYGV---------VLHEIGHALGLRHT-----------FDSDLLPDRFDTNKWSLMAYDR 181
Query: 168 PQDSMMDASFGYCATPM-VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
S G + M V D++A+Q I+GA + + + Y V + + TI+D+G
Sbjct: 182 HPGS------GVASDAMGVFDVLALQDIWGAARYADDDTTY---VGSR-TATTDTIWDTG 231
Query: 227 GDDLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D D T G + + DL ++S G +++ +A TVIE+ G +GND + GN
Sbjct: 232 GIDTFDAT---GTPHRVKLDLREGAFSRFGPAYEDVVVAFGTVIENSRGGAGNDRLAGNP 288
Query: 285 ANNVFFESSGNDVFDGSSGLDTFF 308
A+N + G+D+ +G G D
Sbjct: 289 ASNRIEGNQGDDMLNGKQGDDILL 312
>gi|66046290|ref|YP_236131.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae B728a]
gi|63256997|gb|AAY38093.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae B728a]
Length = 535
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 120/281 (42%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-- 115
WS V D+ F E DI+F G T + Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF-GGFKGLQGT-EFGQAYAPGTLGRSGDVW---IGPN 136
Query: 116 -------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 137 VNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ DI A+Q IYGA G+++YK Q +T
Sbjct: 193 NYSFKP------------TTPMLLDIAAMQFIYGANTHYHTGDDVYKWAPGQS---VFET 237
Query: 222 IYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y N + IA
Sbjct: 238 IWDAGGKDTIDASNQEASVK--INLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN +NV G D G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNELDNVLNGRGGLDTMVGGLGNDTY 336
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q D G D L + + I+LN + ++ +
Sbjct: 329 GGLGNDTYVID-QAGELDLVQEKADQGIDTLKITYDNTSPIAQVINLNAGTLANF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +V+G+ N+ + GN A+NV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGAF-TVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + N+ ++ D N + D LS
Sbjct: 443 ---NNLSEMGKGHNSDVITDFNSQQGDKLS 469
>gi|254469098|ref|ZP_05082503.1| Bacterial pre-peptidase C-terminal domain family protein
[Pseudovibrio sp. JE062]
gi|211960933|gb|EEA96128.1| Bacterial pre-peptidase C-terminal domain family protein
[Pseudovibrio sp. JE062]
Length = 1111
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 142/344 (41%), Gaps = 80/344 (23%)
Query: 27 FIRYKPDVLT----THRLSFDITELN--PNAQEVARWALGEWSKVVDLTFE-------ET 73
+I P LT L ++T LN P + A AL WS V L FE +
Sbjct: 33 YISALPRSLTPEIAAQPLVINVTGLNDYPEYKAAAIGALEVWSAVTPLQFEIVDDAPYDP 92
Query: 74 SIH------------SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+H SD SSN + F + +K D+ Y +
Sbjct: 93 DLHWMEVVSPAIGEQSDGSAFSSNRKVSI-----GQKFHDTEPNKTDIGGY-------VF 140
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDA 175
+ +HE GH GL HPG YN P GV +Y N++ SVMSYF D + +
Sbjct: 141 DSFIHEFGHEFGLNHPGLYNYSGP-GGVQINYLNNATWIYDRQQYSVMSYFDGID-VGET 198
Query: 176 SFGYCATPMVSDIVAV------------QKIYGAPKGSLGNNIYKI-----------EVQ 212
+ +TP+++DI + + Y + G+NIY +
Sbjct: 199 TRWSASTPLMADIESTIRRFFSEVDEDGVRTYQKIDLNTGDNIYGFNSTEYGYELTSDGM 258
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTI-AQHTV--- 267
Q D F TI+D+GG D +D + G I DL +SS+ G+ N++I A H
Sbjct: 259 QHDIGF--TIHDTGGMDTIDFS--GSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNEDQT 314
Query: 268 ---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE +GS+ +D++IGN +NV G D G +G D +F
Sbjct: 315 EYYIEKGIGSNYDDIIIGNDGDNVLDGRGGADKMAGGAGDDIYF 358
>gi|289673120|ref|ZP_06494010.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae FF5]
Length = 419
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 121/281 (43%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIH----SDIKF------ISSNNGYVCTPRYDSR---YFMEINFDKAD 108
WS V D+ F E DI+F + G P R ++ N + AD
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD 141
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 142 P-----AKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA G+++YK Q +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFET 237
Query: 222 IYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y N + IA
Sbjct: 238 IWDAGGKDTIDASNQEASVK--INLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN +NV G D G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNELDNVLNGRGGLDTMIGGLGNDTY 336
>gi|124023792|ref|YP_001018099.1| hypothetical protein P9303_20991 [Prochlorococcus marinus str. MIT
9303]
gi|123964078|gb|ABM78834.1| Hypothetical protein P9303_20991 [Prochlorococcus marinus str. MIT
9303]
Length = 486
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 45/227 (19%)
Query: 125 LHEIGHALGLMHPGSYN-----GGYPVYGVDNDYENDSFLTSVMSYF------------- 166
+HEIGH+LGL H G+YN Y Y N S +S+MSYF
Sbjct: 167 IHEIGHSLGLGHDGNYNFDDSNPKASNYENAGPYLNSSQQSSMMSYFRVPSKDALRSWGV 226
Query: 167 -MPQDSMMDASFGYCATPMVSDIVAVQKIY-----GAPKGSLGNNIYKIE---------V 211
M ++ +A F + TPM D +A+ IY G G+ +Y + V
Sbjct: 227 EMINPNIANAHFEHTNTPMPIDWLALDNIYKQQGYGISNSFNGDTLYGADTSIPAEVSNV 286
Query: 212 QQKDSPFIQ----TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-------IGGYEKNM 260
+ + FI TI D G D++D++ G IDL +S + G + N+
Sbjct: 287 WNQFADFIHHNAFTIVDGSGHDIIDVSF-SGFDQTIDLRATDPNSDFLYPSDVNGLKGNL 345
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IA +T IE + SGND++IGN NN+ SG+D G G +T
Sbjct: 346 YIAANTEIEEAITGSGNDLLIGNKFNNILDGGSGSDELWGFKGANTL 392
>gi|330897915|gb|EGH29334.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 535
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 120/281 (42%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-- 115
WS V D+ F E DI+F G T + Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF-GGFKGLQGT-EFGQAYAPGTLGRSGDVW---IGPN 136
Query: 116 -------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 137 VNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA G+++YK Q +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFET 237
Query: 222 IYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y N + IA
Sbjct: 238 IWDAGGKDTIDASNQEASVK--INLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN +NV G D G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNELDNVLNGRGGLDTMIGGLGNDTY 336
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q D G D L + + I+LN + ++ +
Sbjct: 329 GGLGNDTYVID-QAGELDLVQEKADQGVDTLKITYDNTSPIAQVINLNAGTLANF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +V+G+ N+ + GN A+NV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGAF-TVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + N+ ++ D N + D LS
Sbjct: 443 ---NNLSEMGKGHNSDVITDFNSQQGDKLS 469
>gi|86140056|ref|ZP_01058620.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Roseobacter sp. MED193]
gi|85823306|gb|EAQ43517.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Roseobacter sp. MED193]
Length = 438
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 20/184 (10%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
LHE+GHA+GL HP + P+ YEN+ L S+MSY Q++ + + M
Sbjct: 142 LHELGHAMGLQHP--FEAETPIP---EQYENN--LYSLMSY---QENPYNGE--HSDALM 189
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-I 243
+ D++A+Q I+GA NN + + +I+DSGG D LD T G ++ +
Sbjct: 190 LFDVLALQDIWGAAV----NNEDDTRYTGSRTNTVDSIWDSGGIDTLDAT--GRTESVTV 243
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL ++SS + ++ + T IE+ G+ GND ++GN +N+ G D+ G +G
Sbjct: 244 DLRQGAFSSFD-SDHDVVVTFGTEIENAFGALGNDRIVGNYLDNLLRGHGGRDLLAGKAG 302
Query: 304 LDTF 307
D
Sbjct: 303 DDQL 306
>gi|330939111|gb|EGH42542.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330980802|gb|EGH78905.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 535
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 120/281 (42%), Gaps = 61/281 (21%)
Query: 62 WSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-- 115
WS V D+ F E DI+F G T + Y DVW IG
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRF-GGFKGLQGT-EFGQAYAPGTLGRSGDVW---IGPN 136
Query: 116 -------KGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT +HE GHALGL H S+ Y +D +E+ + ++MSY
Sbjct: 137 VNAADPAKGTDDYLTFMHETGHALGLKH--SFEASQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA G+++YK Q +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFET 237
Query: 222 IYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y N + IA
Sbjct: 238 IWDAGGKDTIDASNQEASVK--INLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGA 295
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IE+ +GS+ ND +IGN +NV G D G G DT+
Sbjct: 296 HIENAIGSAFNDTLIGNDLDNVLNGRGGLDTMIGGLGNDTY 336
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q D G D L + + I+LN + ++ +
Sbjct: 329 GGLGNDTYVID-QAGELDLVQEKADQGVDTLKITYDNTSPIAQVINLNAGTLANF----E 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +V+G+ N+ + GN A+NV F +GN D+ G SG D F +
Sbjct: 384 NVHLKGEGAF-TVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVF 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ L ++ + N+ ++ D N + D LS
Sbjct: 443 ---NNLSEMGKGHNSDVITDFNSQQGDKLS 469
>gi|291527344|emb|CBK92930.1| Listeria/Bacterioides repeat [Eubacterium rectale M104/1]
Length = 1081
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 389 FGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYI 446
FGL E + FD+ YL + D++N +G+ AA +H+I +G+ EGR + F Y
Sbjct: 413 FGLKQEDYHLIFDASYYLNNNPDVKNNWGNTAEAALQHFIKYGMAEGRRGNEIFDVHFYK 472
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRG 504
++ DL NAF D L H+ G EGR + FD Y Y DL++ FG D
Sbjct: 473 DNNIDLQNAFGDNWYLYY---QHYLENGIREGRQASENFDVISYKTRYRDLQSAFGDDYE 529
Query: 505 AAARHYITHGVKEGRNPDAFKAL-------EYIASHEDLINAFADAPDLVQAGKDHFSNF 557
HYI++G+ E R+ + + + S L A AP++ + G
Sbjct: 530 GYVDHYISYGINEERDASPLRYKVDFVDNGQIVESQNVLCMRGAKAPEITKTG------- 582
Query: 558 GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
Y+ S+D +N SD + A
Sbjct: 583 --------------YVLSWDKAYNKIASDTTVNA 602
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 445 YIASHEDLINAFADAPDLVQVG----KDHFSNFGCEEGRF-VTFDSYLYLGSYDDLRNVF 499
YI++ D N L ++G + + FG ++ + + FD+ YL + D++N +
Sbjct: 381 YISNQSDATNYLGSETALKKLGIADAQGIVNYFGLKQEDYHLIFDASYYLNNNPDVKNNW 440
Query: 500 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G+ AA +H+I +G+ EGR + F Y ++ DL NAF D L H+ G
Sbjct: 441 GNTAEAALQHFIKYGMAEGRRGNEIFDVHFYKDNNIDLQNAFGDNWYLYY---QHYLENG 497
Query: 559 YEEGRSITFNPDL--YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
EGR + N D+ Y T Y DL + FG D HYI++G+ E R
Sbjct: 498 IREGRQASENFDVISYKTRYRDLQSAFGDDYEGYVDHYISYGINEER 544
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 376 GQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G +++HF ++G++EGR + FD + Y + DL+N FG + +HY+ +G++E
Sbjct: 441 GNTAEAALQHFIKYGMAEGRRGNEIFDVHFYKDNNIDLQNAFGDNWYLYYQHYLENGIRE 500
Query: 434 GRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
GR + F + Y + DL +AF D + DH+ ++G E R
Sbjct: 501 GRQASENFDVISYKTRYRDLQSAFGDDYEGY---VDHYISYGINEER 544
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
DL G + + +H+ E G+ EGR + FD Y Y DL++ FG D HYI
Sbjct: 477 DLQNAFGDNWYLYYQHYLENGIREGRQASENFDVISYKTRYRDLQSAFGDDYEGYVDHYI 536
Query: 428 THGVKEGRNPDAFKAL-------EYIASHEDLINAFADAPDLVQVG 466
++G+ E R+ + + + S L A AP++ + G
Sbjct: 537 SYGINEERDASPLRYKVDFVDNGQIVESQNVLCMRGAKAPEITKTG 582
>gi|317447650|emb|CBJ55056.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 245
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 42/232 (18%)
Query: 3 NIKPVYTTERIADHLLRDQ-------------YWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFI------------------SSNNGYVCT 91
+ A A+ W+ V ++TF E + D +N Y +
Sbjct: 72 LQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTS 131
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGV 149
+ +++ N A++ G HEIGH LGL HPG YN G P Y
Sbjct: 132 GTDGTSWYLINNSYTANI---NPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSY-K 187
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGA 197
D DY D+ SVMSY+ ++ + + G Y + P++ DI A+Q +YG+
Sbjct: 188 DADYGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIXDIAAIQXLYGS 239
>gi|259414826|ref|ZP_05738749.1| alkaline metalloproteinase [Silicibacter sp. TrichCH4B]
gi|259349277|gb|EEW61024.1| alkaline metalloproteinase [Silicibacter sp. TrichCH4B]
Length = 692
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 146/371 (39%), Gaps = 74/371 (19%)
Query: 1 MHNIKPVYTTERIADHLLRD-QYWSNYFIRYK-PDVLTTHRLSFDITELNPNAQEVARWA 58
M + + + IA++L R+ ++W I + D L T +T L+ + A
Sbjct: 1 MPSYPSSFLPQSIANNLTREGRHWDKTTITFSFDDTLPTSGGVSSVT-LDTIQRSWINEA 59
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR--YFMEINFDKADVWRY---- 112
+ V+D+ F + + DI F NG T Y Y + +DV+
Sbjct: 60 IALLEDVIDVDFVQVTSGGDISF----NGVSGTSTYTQTFYYLSSGDITSSDVYLSQERD 115
Query: 113 -----GIGKGTILSHNALHEIGHALGLMHPGSY-NGGYPVYGVDNDYENDSFLTSVMSYF 166
+ G +HE+ H +GL+HP Y N G Y + D+ D+ S+MSYF
Sbjct: 116 ENLGENLSYGNQGFQTIIHELLHTVGLLHPSDYGNYGSDDYFLAADFREDTIRHSIMSYF 175
Query: 167 MPQ--------DSMMDASFGY--CATPMVSDIVAVQKIYGAPKG-----------SLGNN 205
P + ASF T MV DI+A+ + G+ G GN
Sbjct: 176 DPAYDGSGSTWAAFDGASFSKIDAQTMMVYDILALSE--GSHNGLFSGYGLNLTTRAGNT 233
Query: 206 IYK----------IEVQQKDSPFIQTIYDSGGDDLLDLT--------------------- 234
Y + +P + TIYD+GG D LDL+
Sbjct: 234 TYGYNATNGIRQVFNFDENGAPAL-TIYDAGGIDTLDLSGDDVSKQRTVTYAVDGSFTFG 292
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ V IDL + ++SS G N+ IA T+IE+ +G+ D + GN + N G
Sbjct: 293 MTDRVSAIIDLTSGAYSSTHGMTNNIGIAFGTIIENAIGTVFRDNIKGNGSQNQLHGGRG 352
Query: 295 NDVFDGSSGLD 305
+D G SG D
Sbjct: 353 DDTIFGMSGDD 363
>gi|27381138|ref|NP_772667.1| protease [Bradyrhizobium japonicum USDA 110]
gi|27354305|dbj|BAC51292.1| bll6027 [Bradyrhizobium japonicum USDA 110]
Length = 844
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 122/300 (40%), Gaps = 69/300 (23%)
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM----PQDSMMDASFGY 179
ALHE+GHALGL H GG V + +++ + +VMSY P + ++GY
Sbjct: 121 ALHELGHALGLKHS-QETGGVANVAVPSAHDDSEY--TVMSYRSYVGGPLTGYTNEAYGY 177
Query: 180 CATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV-----------QQKDSP--------FI 219
T M +DI+A+Q +YGA G +Y Q D+
Sbjct: 178 PQTYMANDILALQTMYGANYTTQSGTTVYTWSTATGQEFINGVGQPADNGGAGGSANRIF 237
Query: 220 QTIYDSGGDDLLDLTLIGGVKNY-----IDLN---TESWSSIG-GYEKNMTIAQHTV--- 267
+TI+D GG D DL+ NY I+LN + +SS+ Y N A V
Sbjct: 238 ETIWDGGGVDTYDLS------NYTTNLSINLNPGASSVFSSVQLAYLGNGHYASGNVYNA 291
Query: 268 ----------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS---- 313
I++ +G SGND ++GN+ N SGND G G DT A +
Sbjct: 292 YLYNNDARSYIDNAIGGSGNDTIVGNAIANTLNGGSGNDTITGGGGNDTILGGAGTDTAV 351
Query: 314 ----YLYKIYRFENAIIVYDANEHK------QDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ +A + + + D ++ VE +FADQ + S + LE
Sbjct: 352 YSGSRSSYSVSYNSATQTFTVTDLRGSLFDGTDTITGVEYFQFADQTVASETLTGPLTLE 411
>gi|238623414|emb|CAS06701.1| alkaline metalloprotease [Pseudomonas fluorescens bv. G]
Length = 215
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----Y 179
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ ++ + S G Y
Sbjct: 121 HEIGHTLGLAHPGDYNAGEGNPSY-KDASYGQDTRGYSVMSYWSESNTSQNFSKGGVEAY 179
Query: 180 CATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQK 214
+ P++ DI A+QK+YGA + G+ Y +++Q +
Sbjct: 180 SSGPLMDDIAAIQKLYGANYSTRAGDTTYGLQLQHR 215
>gi|307319197|ref|ZP_07598627.1| Serralysin [Sinorhizobium meliloti AK83]
gi|306895304|gb|EFN26060.1| Serralysin [Sinorhizobium meliloti AK83]
Length = 551
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 117/303 (38%), Gaps = 73/303 (24%)
Query: 59 LGEWSKVVDLTF----EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-RYG 113
L ++S V +++F E + H+D++ SS+ P YF + D W
Sbjct: 68 LDQFSSVANVSFTEITESATKHADLRLASSD-----APSTAWAYFPSTAGEGGDAWFNKS 122
Query: 114 IG------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY-- 165
G KG LHE GHALGL H N PV DS +VMSY
Sbjct: 123 SGHYSRPVKGNYAYVTFLHETGHALGLEHAHEGNV-MPV-------NRDSMEYTVMSYRS 174
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD------ 215
+ ++GY + M+ DI A+Q +YGA GN Y+ +
Sbjct: 175 YVGASTTTGYTNETWGYAQSLMMYDIAALQHMYGADFTTHSGNTTYRWSPTSGEMFTNGI 234
Query: 216 -------SPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYE------ 257
+ + T++D GG D D + NY +DL W++ +
Sbjct: 235 GQGAPGGNKILLTVWDGGGTDTYDFS------NYATALKVDLRPGEWTTTSAAQLAKLHY 288
Query: 258 -------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N+ A ++IE+ G +GND + GN+A N + + GND G G
Sbjct: 289 DGSKVAIGNIANALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGNGGNDRLIGGDGN 348
Query: 305 DTF 307
D
Sbjct: 349 DNL 351
>gi|254501672|ref|ZP_05113823.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222437743|gb|EEE44422.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 2061
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V ++GND + G + +++ F +GND+ +G + D Y S + +
Sbjct: 1786 DTVGSTTGNDQIFGEAGDDLLFGGAGNDLLNGGANRDAALYGVTSDGVTLSGTRGTVTAV 1845
Query: 329 DANEHKQDFLSDVERLRFADQCI---DSVNV---------KQRSILE--YTASYEDLIQV 374
DA D L+ VE + F + D V V Q E Y +++D+
Sbjct: 1846 DAG--GTDTLTGVELVVFTGENTTGKDRVTVLLQDNAPVAGQYGFNEAAYLGAHQDVAAA 1903
Query: 375 IGQDVFES-MKHFYEFGLSEGR--DITFDSYLYLGSYDDL-----RNVFGSDRGAAARHY 426
+ +F S +H+ FG EGR D+ FD+ YL D+ +F S A+ HY
Sbjct: 1904 VAAGIFASGAEHYALFGQGEGRVVDLLFDAQFYLADNPDVAAAVTEGIFAS----ASEHY 1959
Query: 427 ITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-- 482
HG E R NP F Y+ +ED+ NA + HF +G +EGR +
Sbjct: 1960 QLHGYAENRSLNP-LFDGEYYLTQNEDVANAVGSGG--LDSAYHHFVLYGDQEGRAASRF 2016
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
FD+ Y GSD +A H++ G+ +G
Sbjct: 2017 FDTAAYREEQG-----LGSDE-SALEHFLLVGLPQG 2046
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 483 FDSYLYLGSYDDLR-----NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 536
F+ YLG++ D+ +F S A HY G EGR D F A Y+A + D+
Sbjct: 1888 FNEAAYLGAHQDVAAAVAAGIFAS----GAEHYALFGQGEGRVVDLLFDAQFYLADNPDV 1943
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGS-DRSAAAQH 593
A + + + +H+ GY E RS+ F+ + YLT +D+ N GS +A H
Sbjct: 1944 AAAVTEG--IFASASEHYQLHGYAENRSLNPLFDGEYYLTQNEDVANAVGSGGLDSAYHH 2001
Query: 594 YITHGMKEGRA 604
++ +G +EGRA
Sbjct: 2002 FVLYGDQEGRA 2012
>gi|317447637|emb|CBJ55048.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 203
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 78/188 (41%), Gaps = 34/188 (18%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------- 85
+ H +S ++ N + A A+ W+ V ++TF E + D N
Sbjct: 11 TMNKHGIS-GFSQFNTQQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSXGQDGA 69
Query: 86 ----------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
GY T Y + N D+ YG HEIGH LGL
Sbjct: 70 AAFAYLPGTGAGYDGTSWYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLA 121
Query: 136 HPGSYNG--GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIV 189
HPG YN G P Y D Y D+ S+MSY+ ++ + S G Y + P++ DI
Sbjct: 122 HPGDYNAGNGNPTYN-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIA 180
Query: 190 AVQKIYGA 197
A+QK+YGA
Sbjct: 181 AIQKLYGA 188
>gi|227823260|ref|YP_002827232.1| hypothetical protein NGR_c27300 [Sinorhizobium fredii NGR234]
gi|227342261|gb|ACP26479.1| hypothetical protein NGR_c27300 [Sinorhizobium fredii NGR234]
Length = 607
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 99/226 (43%), Gaps = 32/226 (14%)
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFLTS---- 161
AD+ R G S LHEI H+LGL H G + GV D D + L S
Sbjct: 119 ADIIRLGT-----FSDVWLHEIAHSLGLKHTHDSIAGPTLPGVVDEDDKGTGLLNSSIYS 173
Query: 162 VMSY---FMPQDSMMDAS--FGYC--ATPM---VSDIVAVQKIYGAPKGSLGNNIYKIEV 211
VM Y F +D+ + FG A P DI A+Q +YGA + GN++Y+
Sbjct: 174 VMGYTYAFWGEDNPFTQARDFGTTLNAQPGSLGAIDIAALQHMYGAKAHNTGNDLYRFSD 233
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGG---------YEKNMT 261
+ T++D+GG+D + T G + IDL + + IGG T
Sbjct: 234 NVDFNRGYTTLWDTGGNDTIAYT--GTSRAKIDLRAATLKAEIGGGGWLSTSETLTGGFT 291
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IA VIE+ G D++IGN+ NV G D G +G D +
Sbjct: 292 IANGVVIENAKGGPAADILIGNAVGNVLDGGRGADQLHGLAGNDIY 337
>gi|238623366|emb|CAS06677.1| alkaline metalloprotease [Pseudomonas sp. Z22b]
Length = 199
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 50 NAQEVAR--WALGEWSKVVDLTFEETSIHSDIKFISSN------------------NGYV 89
NAQ+ A+ A+ W+ V +TF E + D N GY
Sbjct: 25 NAQQKAQAVLAMQSWADVAKVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYD 84
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVY 147
T Y + N D+ YG HEIGH LGL HPG YN G P Y
Sbjct: 85 GTSWYLTNNSYTPN-KTPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTY 136
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGA 197
D Y D+ S+MSY+ ++ + S G Y + P++ DI A+QK+YGA
Sbjct: 137 N-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGA 189
>gi|163851117|ref|YP_001639160.1| beta strand repeat-containing protein [Methylobacterium extorquens
PA1]
gi|163662722|gb|ABY30089.1| autotransporter-associated beta strand repeat protein
[Methylobacterium extorquens PA1]
Length = 1632
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 109/261 (41%), Gaps = 64/261 (24%)
Query: 377 QDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
Q ++ H+ +G EGRD TF + YL + ++ G D H+ G KEG
Sbjct: 1395 QAQIDAEAHYAAYGWREGRDPNATFSTGGYLAANPEVAAA-GLD---PLVHFAQAGWKEG 1450
Query: 435 RNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
R+P A F Y+A H P+ G D S++ +GR ++ +G
Sbjct: 1451 RDPAAGFDVELYLARH----------PEAQAAGLDPLSHY-LAQGRAEGLAAHTAIGRPA 1499
Query: 494 DLRNVFGSDRGA----------AAR------------HYITHGVKEGRNPDA-FKALEYI 530
DL G D A AAR HY T+G +EGRNP+A F Y+
Sbjct: 1500 DLAQQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNAVFDTKGYL 1559
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRS 588
A++ D+ A D H+ +G EGR S +F+ YL + D+
Sbjct: 1560 AAYGDVAAAGIDP-------LAHYVRYGAAEGRDPSASFDGKAYLAANSDV--------- 1603
Query: 589 AAAQ-----HYITHGMKEGRA 604
AAA HY+ +G EGR+
Sbjct: 1604 AAAGLNPMLHYLQYGAAEGRS 1624
>gi|209967145|ref|YP_002300060.1| hypothetical protein RC1_3906 [Rhodospirillum centenum SW]
gi|209960611|gb|ACJ01248.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 912
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 24/234 (10%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND V G + +G+D DG SG+D A + +
Sbjct: 685 GDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEAAGPWGVRLSGAA 744
Query: 333 HKQDFLSDVERLRFADQCI-DSVNVKQRSILE----------YTASYEDLIQVIGQDVFE 381
D S VE +RF DQ + ++ V+ ++ Y A + D+ + F+
Sbjct: 745 TGTDVASGVELIRFDDQVVYVTLPVRFAAVQPDGGGAFDEAFYLAQWADVRAAVADGRFQ 804
Query: 382 S-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNP 437
S ++H+ FG +EGRD T FD YL + D+R + + + HY+ G +E R+P
Sbjct: 805 SGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDRDP 864
Query: 438 DA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYL 489
A F Y+ + D+ +A D H+ +G E R T D+ L+L
Sbjct: 865 SAWFDLSAYLQRNPDVADAGIDP-------LRHWLVWGIGEDRIATAADTGLWL 911
>gi|296532986|ref|ZP_06895639.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266686|gb|EFH12658.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 921
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 120/286 (41%), Gaps = 61/286 (21%)
Query: 343 RLRFADQCI-DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
RL FAD + D + Y A+Y D I G D H+ FG EG+D + F
Sbjct: 665 RLVFADGVLRDQDGDALMDGIHYAATYRD-IYAAGVD---PAAHYRSFGWQEGKDPSAYF 720
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ Y + D+R G + H+ +G EGR+P A E+ + N
Sbjct: 721 STLGYRSANADVRQA-GVN---PLEHFRQNGSAEGRDPSA----EFDLRMYKVYN----- 767
Query: 460 PDLVQVGKD---HFSNFGCEEGRFV----------TFDSYLYLGSYDDLRNVFGSDRGAA 506
PD+ G + H+ FG EGR + D YL S D+ G D A
Sbjct: 768 PDVAAAGLEPLTHYLAFGAAEGRRIHAAVGDDIRGGLDLQYYLLSQPDV-GFAGVDPAA- 825
Query: 507 ARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR-- 563
H+ G +EGR+P+A F Y+A++ D+ A D H+ G+ EGR
Sbjct: 826 --HFRASGWREGRDPNAYFDTAGYLATYADVRAAGVDP-------LAHYMASGWREGRDP 876
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAA-----QHYITHGMKEGRA 604
S F+ YL + D+ AAA QH++T G+ EGR+
Sbjct: 877 STRFDTTAYLAANPDV---------AAAGVNPLQHFLTAGLFEGRS 913
>gi|238623364|emb|CAS06676.1| alkaline metalloprotease [Pseudomonas sp. W2a]
Length = 229
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 126 HEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----Y 179
HEIGH LGL HPG YN G P Y D Y D+ S+MSY+ ++ + S G Y
Sbjct: 113 HEIGHTLGLAHPGDYNAGNGNPTYN-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAY 171
Query: 180 CATPMVSDIVAVQKIYGA 197
+ P++ DI A+QK+YGA
Sbjct: 172 ASGPLIDDIAAIQKLYGA 189
>gi|317447641|emb|CBJ55051.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 243
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 126 HEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----Y 179
HEIGH LGL HPG YN G P Y D Y D+ S+MSY+ ++ + S G Y
Sbjct: 113 HEIGHTLGLAHPGDYNAGNGNPTYN-DATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAY 171
Query: 180 CATPMVSDIVAVQKIYGA 197
+ P++ DI A+QK+YGA
Sbjct: 172 ASGPLIDDIAAIQKLYGA 189
>gi|218438236|ref|YP_002376565.1| hypothetical protein PCC7424_1250 [Cyanothece sp. PCC 7424]
gi|218170964|gb|ACK69697.1| hypothetical protein PCC7424_1250 [Cyanothece sp. PCC 7424]
Length = 849
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 53/263 (20%)
Query: 378 DVFES----MKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
DV ES + + ++G EGR + FDS YL Y ++ + G + A HY+ G
Sbjct: 260 DVVESGVNPLADYLDYGAREGRKPNPLFDSSYYLLQYPNVAEM-GINPLA---HYLLSGA 315
Query: 432 KEGRNPD-----AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FD 484
+EGR P+ ++ L+Y E +N A H+ G EGR FD
Sbjct: 316 REGRKPNPLFDSSYYLLQYSDVAESGVNPLA-----------HYLLSGAREGRKPNPLFD 364
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 543
S YL Y D V S A Y+ +G +EGR P++ F + Y+ +
Sbjct: 365 SSYYLQQYPD---VVESGVNPLA-DYLDYGAREGRKPNSLFNSSYYLQQY---------- 410
Query: 544 PDLVQAGKD---HFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
PD+V++G + H+ ++G EGR F+ YL Y D+ G HY+ +G
Sbjct: 411 PDVVESGVNPLAHYLDYGALEGRKPNPWFDSGYYLQQYPDV----GEMGINPLAHYLDYG 466
Query: 599 MKEGRALGISGMQFKSVMNLSEK 621
EGR L K++M S++
Sbjct: 467 AYEGR-LAWPLPTIKAIMQESKQ 488
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 62/221 (28%)
Query: 425 HYITHGVKEGRNPDA-FKALEYIASHEDL----INAFADAPDLVQVGKDHFSNFGCEEGR 479
HY+ HG EGR P+ F + Y+ + D+ +N A H+ G EGR
Sbjct: 119 HYLDHGGLEGRKPNPLFDSSYYLQQYSDVAESGVNPLA-----------HYLLSGAREGR 167
Query: 480 FVT--FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHED 535
FDS YL Y D+ ++ G HY+ G +EGR P+ F + Y+ + D
Sbjct: 168 KPNPLFDSSYYLQQYPDV-----AESGVNPLAHYLLSGAREGRKPNPLFDSSYYLQQYPD 222
Query: 536 L----INAFAD------------------------APDLVQAGKDHFS---NFGYEEGRS 564
+ +N AD PD+V++G + + ++G EGR
Sbjct: 223 VAESGVNPLADYLDYGAREGRKPNPLFDSSYYLQQYPDVVESGVNPLADYLDYGAREGRK 282
Query: 565 IT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+ YL Y ++ + G + A HY+ G +EGR
Sbjct: 283 PNPLFDSSYYLLQYPNVAEM-GINPLA---HYLLSGAREGR 319
>gi|148553551|ref|YP_001261133.1| peptidase M10, serralysin-like protein [Sphingomonas wittichii RW1]
gi|148498741|gb|ABQ66995.1| Peptidase M10, serralysin-like protein [Sphingomonas wittichii RW1]
Length = 606
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 182 TPMVSDIVAVQKIYGAPKGSL--GNNIYKI------------EVQQKDSPFIQTIYDSGG 227
TPM DIVA+Q+IYG + G +Y + Q P + T+++ G
Sbjct: 232 TPMPLDIVAIQRIYGVAVDTPLSGGQVYGFNSNIAGPIAKYFDFTQNSRPIV-TLWNKGV 290
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ LD++ + IDL+ ++SS+ G + ++ IA T I+S + GND ++GN +N
Sbjct: 291 GNTLDVSGFT-SPSTIDLHDGAFSSVTGLKNDIAIAYGTRIDSAITGPGNDTIVGNDNSN 349
Query: 288 VFFESSGNDVFDGSSGLDTFFYYA 311
V +GND G SG D + A
Sbjct: 350 VIMAGAGNDSITGGSGNDHLYGAA 373
>gi|119487881|ref|ZP_01621378.1| hypothetical protein L8106_28496 [Lyngbya sp. PCC 8106]
gi|119455457|gb|EAW36595.1| hypothetical protein L8106_28496 [Lyngbya sp. PCC 8106]
Length = 2050
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDR 419
LE+ + + L++ GQ ++ HF EFG EGR+ +F+ Y D+ V R
Sbjct: 142 LEFNSDIKTLVEA-GQ--LDAKAHFMEFGKFEGREFSYSFNITEYAEKNVDVSQVVS--R 196
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ H++ G++EGR ++ F +Y+ + D+ N F V G HF FG E
Sbjct: 197 QSLLSHFLEFGLEEGREFNSLFSVKKYLEKNTDIDNVFQGQGKFVS-GFRHFLKFGQYEQ 255
Query: 479 R----FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASH 533
R F YL L S DL + + + +H+ G KE R + FK EY+ +
Sbjct: 256 RECGDFFKPSEYLSLNS--DLESFVQGGQFSLFKHFNKFGKKERREFSNFFKVSEYLQLN 313
Query: 534 EDLINAFADAPDLVQAGK----DHFSNFGYEEGRSITFN 568
++L+ D VQ+G+ DH+ FG E R +F+
Sbjct: 314 QELV-------DFVQSGQITAVDHWLQFGRLENREFSFS 345
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
D FD YL D++ + + + A H++ G EGR +F EY + D+
Sbjct: 133 DELFDVDAYLEFNSDIKTLVEAGQLDAKAHFMEFGKFEGREFSYSFNITEYAEKNVDVSQ 192
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL----YLGSYDDLRNVF-GSDRGAAA-R 508
+ L HF FG EEGR F+S YL D+ NVF G + + R
Sbjct: 193 VVSRQSLL-----SHFLEFGLEEGR--EFNSLFSVKKYLEKNTDIDNVFQGQGKFVSGFR 245
Query: 509 HYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGK----DHFSNFGYEEGR 563
H++ G E R D FK EY++ + DL VQ G+ HF+ FG +E R
Sbjct: 246 HFLKFGQYEQRECGDFFKPSEYLSLNSDL-------ESFVQGGQFSLFKHFNKFGKKERR 298
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
+ F YL +L + S + A H++ G E R S
Sbjct: 299 EFSNFFKVSEYLQLNQELVDFVQSGQITAVDHWLQFGRLENREFSFS 345
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF-G 416
+I EY D+ QV+ + + HF EFGL EGR+ F YL D+ NVF G
Sbjct: 179 NITEYAEKNVDVSQVVSRQSL--LSHFLEFGLEEGREFNSLFSVKKYLEKNTDIDNVFQG 236
Query: 417 SDRGAAA-RHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGK----DHF 470
+ + RH++ G E R D FK EY++ + DL VQ G+ HF
Sbjct: 237 QGKFVSGFRHFLKFGQYEQRECGDFFKPSEYLSLNSDL-------ESFVQGGQFSLFKHF 289
Query: 471 SNFGCEEGR----FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ FG +E R F YL L +L + S + A H++ G E R
Sbjct: 290 NKFGKKERREFSNFFKVSEYLQLNQ--ELVDFVQSGQITAVDHWLQFGRLENR 340
>gi|238623412|emb|CAS06700.1| alkaline metalloprotease [Pseudomonas chlororaphis subsp.
chlororaphis]
Length = 286
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 59/280 (21%)
Query: 3 NIKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP Y+ ++ A LLRD + + + H +S ++ N
Sbjct: 13 NGKPSYSVDQAATQLLRDGAAYQDLNGNGKIELTYTFLTSASSSTMYKHGIS-GFSQFNA 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNG------YVCTP----RYDSR 97
+ A A+ W+ V ++TF E + D + F + + G + P YD
Sbjct: 72 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 131
Query: 98 YFMEINF----DKA-DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVD 150
+ IN +KA D+ YG HEIGH LGL HPG YN G P Y D
Sbjct: 132 SWYLINSSYTQNKAPDLNNYG-------RQTLTHEIGHTLGLAHPGDYNAGNGNPTYN-D 183
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASF------GYCATPMVSDIVAVQKIYGAPKG---- 200
Y D+ S+MSY+ +S D +F Y + P++ DI A+QK+YGA
Sbjct: 184 ATYGEDTRGYSIMSYW--SESNTDQNFSKAGVEAYSSGPLMDDIAAIQKLYGANTTTRTG 241
Query: 201 ----SLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLT 234
+N + + + +++D+GG D LD +
Sbjct: 242 DTTYGFNSNTGRDFLSASSSADKLVFSVWDAGGKDTLDFS 281
>gi|332970464|gb|EGK09455.1| hypothetical protein HMPREF0476_0906 [Kingella kingae ATCC 23330]
Length = 773
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 104/243 (42%), Gaps = 30/243 (12%)
Query: 125 LHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+HEIGH+LG H G+YNG G D E +S SVMSY +DS +
Sbjct: 357 VHEIGHSLGFKHTGNYNGQNGKAEGPYLPDGEENSG-HSVMSYKDLRDSNQNV-IQTGQG 414
Query: 183 PMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT-IYDSGGDDLLDLTLIGGVK 240
+ D+ A+ YG K + GNN Y+ + KD I+D G D D + K
Sbjct: 415 LQIFDLAALHYRYGVNKAENSGNNTYRFKAYNKDKVGNDIYIWDGSGIDTFDASDAKD-K 473
Query: 241 NYIDLNTESWSSIGGYEKNMT-------------IAQHTVIESVVGSSGNDVVIGNSANN 287
+DL SW+ IG ++ I T IE+++GS+ ND + GN A+N
Sbjct: 474 VTVDLTPGSWNYIGSKTSHLITDTLGHKVTGQSFIGYGTQIENLIGSAFNDTLRGNDADN 533
Query: 288 V---------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ F GND DG G+D +Y I + + ANE K +
Sbjct: 534 IITGGKGNDTIFGDLGNDTLDGGEGVDQLSGGRGDDIY-IVDNTSDTVTEAANEGKDTVI 592
Query: 339 SDV 341
S V
Sbjct: 593 SSV 595
>gi|254503616|ref|ZP_05115767.1| von Willebrand factor type A domain protein [Labrenzia alexandrii
DFL-11]
gi|222439687|gb|EEE46366.1| von Willebrand factor type A domain protein [Labrenzia alexandrii
DFL-11]
Length = 609
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 26/186 (13%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRG--AAARHYITHGVKEGRNPDAFKALE--YIASHEDLI 453
+FD YL Y D+ + G+ G + HY+ G+ EGR AF E Y+ +ED++
Sbjct: 437 SFDEAFYLSLYSDVASAVGTSGGFESGLAHYLQLGIFEGR-LGAFPFNEEFYLNENEDIL 495
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
A GK+HF G EGR FD+ YL D+ + A +HY+
Sbjct: 496 AAVQAGS--FSSGKEHFILHGMFEGRDPVSLFDTEYYLDQNSDVEAAVTAGAITAYQHYL 553
Query: 512 THGVKEGRNP-DAFKALEYIASHEDL----INAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
G +EGR P + F +Y + ++D+ I+AF HF G EGRSI+
Sbjct: 554 LSGSQEGRRPSNLFSEGDYYSVNQDVAVVGIDAFI-----------HFYGMGVAEGRSIS 602
Query: 567 FNPDLY 572
+PDL
Sbjct: 603 -DPDLL 607
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRG--AAARHYITHGVKEGRNPDAFKALE--YIASHEDLI 537
+FD YL Y D+ + G+ G + HY+ G+ EGR AF E Y+ +ED++
Sbjct: 437 SFDEAFYLSLYSDVASAVGTSGGFESGLAHYLQLGIFEGR-LGAFPFNEEFYLNENEDIL 495
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
A +GK+HF G EGR F+ + YL D+ + A QHY+
Sbjct: 496 AAVQAGS--FSSGKEHFILHGMFEGRDPVSLFDTEYYLDQNSDVEAAVTAGAITAYQHYL 553
Query: 596 THGMKEGR 603
G +EGR
Sbjct: 554 LSGSQEGR 561
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 364 YTASYEDLIQVIGQDVFESMK-HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y ED++ + F S K HF G+ EGRD FD+ YL D+ +
Sbjct: 487 YLNENEDILAAVQAGSFSSGKEHFILHGMFEGRDPVSLFDTEYYLDQNSDVEAAVTAGAI 546
Query: 421 AAARHYITHGVKEGRNP-DAFKALEYIASHEDL----INAFADAPDLVQVGKDHFSNFGC 475
A +HY+ G +EGR P + F +Y + ++D+ I+AF HF G
Sbjct: 547 TAYQHYLLSGSQEGRRPSNLFSEGDYYSVNQDVAVVGIDAFI-----------HFYGMGV 595
Query: 476 EEGRFVTFDSYLYL 489
EGR ++ L L
Sbjct: 596 AEGRSISDPDLLGL 609
>gi|307826097|ref|ZP_07656309.1| glycosyl transferase family 2 [Methylobacter tundripaludum SV96]
gi|307732835|gb|EFO03700.1| glycosyl transferase family 2 [Methylobacter tundripaludum SV96]
Length = 1802
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 106/235 (45%), Gaps = 46/235 (19%)
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 439
+ H+ G +EGR+ FDS YL D V + A HY++ G EGRNP+
Sbjct: 622 LAHYLSKGAAEGRNPNPWFDSRWYLEQNPD---VAAAGLNPLA-HYLSRGAAEGRNPNPL 677
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F + Y+ + D+ A A+ LV H+ + G EGR + FDS YL D
Sbjct: 678 FDSRWYLEKNPDV--AEAEINPLV-----HYLSNGAIEGRNPSPLFDSRWYLEQNPD--- 727
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD---H 553
V + A HY++ G EGRNP+ F + Y+ + PD+ AG + H
Sbjct: 728 VAAAGLNPLA-HYLSRGAAEGRNPNPLFDSRWYLEQN----------PDVAAAGLNPLVH 776
Query: 554 FSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA-----QHYITHGMKEGR 603
+ + G EGR NP+ + +D W + + A A H+I G +EGR
Sbjct: 777 YLSKGAAEGR----NPNPW---FDSRWYLEQNPDVAEAGLNPLVHFIRSGAEEGR 824
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 58/242 (23%)
Query: 382 SMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPD 438
S+ H+ G EGR+ F+S YL D+ ++ G HY++ G EGRNP+
Sbjct: 469 SLAHYLSKGAVEGRNPNPLFNSRWYLEQNPDV-----AEAGINPLVHYLSKGAAEGRNPN 523
Query: 439 -AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F + Y+ + D+ A A+ LV H+ + EGR + FDS YL D+
Sbjct: 524 FLFDSRWYLEQNPDV--AEAEINPLV-----HYLSNAAIEGRNPSPLFDSRWYLEQNPDV 576
Query: 496 RNVFGSDRGAAA-----RHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQA 549
AAA HY++ G EGRNP+ F Y+ + PD+ A
Sbjct: 577 ---------AAAGLNPLTHYLSAGTVEGRNPNLWFDCCWYLEQN----------PDVAAA 617
Query: 550 GKD---HFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA-----QHYITHGMKE 601
G + H+ + G EGR NP+ + +D W + + AAA HY++ G E
Sbjct: 618 GVNPLAHYLSKGAAEGR----NPNPW---FDSRWYLEQNPDVAAAGLNPLAHYLSRGAAE 670
Query: 602 GR 603
GR
Sbjct: 671 GR 672
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 375 IGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ + + H+ G EGR+ + FDS YL D V + A HY++ G
Sbjct: 690 VAEAEINPLVHYLSNGAIEGRNPSPLFDSRWYLEQNPD---VAAAGLNPLA-HYLSRGAA 745
Query: 433 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
EGRNP+ F + Y+ + D+ A A LV H+ + G EGR FDS YL
Sbjct: 746 EGRNPNPLFDSRWYLEQNPDV--AAAGLNPLV-----HYLSKGAAEGRNPNPWFDSRWYL 798
Query: 490 GSYDDLRNVFGSDRGA-AARHYITHGVKEGRN--PDAFKALEYIASHEDLINAFADAPDL 546
D+ ++ G H+I G +EGR P F+ ++ + H L
Sbjct: 799 EQNPDV-----AEAGLNPLVHFIRSGAEEGRQPKPQPFRDMKILCEH------------L 841
Query: 547 VQAGKDHFSNFGYE 560
++ + F G+E
Sbjct: 842 LRINRKQFGLLGFE 855
>gi|303285997|ref|XP_003062288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455805|gb|EEH53107.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 902
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 64/153 (41%), Gaps = 41/153 (26%)
Query: 370 DLIQVIGQDVFESMKHFYEFGLSE-GRDITFD-SYLYLGSYDDLRNVFGSDRGAAARHYI 427
D +Q Q V E + H E L+ +DI+ D + YL Y DLR FG + A +H++
Sbjct: 199 DFVQKALQKV-EKLHHALEGSLANIDKDISDDQAKCYLHRYRDLRGAFGHNIARAKKHWV 257
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
HG E R D +YI + E +
Sbjct: 258 DHGRHEHRTLD----CDYITNEE----------------------------------AQC 279
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
YL Y DLR FG + GAA RH+ HG KEGR+
Sbjct: 280 YLNRYSDLRRAFGHNIGAAKRHWNKHGKKEGRD 312
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 327 VYDANEHKQDFLSDVERLRFADQC----IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++D + Q L VE+L A + ID ++ Y Y DL G ++ +
Sbjct: 194 IHDRTDFVQKALQKVEKLHHALEGSLANIDK-DISDDQAKCYLHRYRDLRGAFGHNIARA 252
Query: 383 MKHFYEFGLSEGRDITFD------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
KH+ + G E R + D + YL Y DLR FG + GAA RH+ HG KEGR+
Sbjct: 253 KKHWVDHGRHEHRTLDCDYITNEEAQCYLNRYSDLRRAFGHNIGAAKRHWNKHGKKEGRD 312
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 49/134 (36%), Gaps = 45/134 (33%)
Query: 477 EGRFVTFD-------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
EG D + YL Y DLR FG + A +H++ HG E R D
Sbjct: 216 EGSLANIDKDISDDQAKCYLHRYRDLRGAFGHNIARAKKHWVDHGRHEHRTLDC------ 269
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
D+ +N EE + YL Y DL FG + A
Sbjct: 270 ----------------------DYITN---EEAQ-------CYLNRYSDLRRAFGHNIGA 297
Query: 590 AAQHYITHGMKEGR 603
A +H+ HG KEGR
Sbjct: 298 AKRHWNKHGKKEGR 311
>gi|238623425|emb|CAS06707.1| alkaline metalloprotease [Pseudomonas fluorescens bv. F]
Length = 277
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 126 HEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF------ 177
HEIGH LGL HPG YN G P Y D Y D+ SVMSY+ +S D +F
Sbjct: 157 HEIGHTLGLAHPGDYNAGEGAPTYN-DATYGEDTRGYSVMSYW--SESNTDQNFSKSGVE 213
Query: 178 GYCATPMVSDIVAVQKIYGA 197
Y + P++ DI A+QK+YGA
Sbjct: 214 AYASGPLMDDIAAIQKLYGA 233
>gi|56698492|ref|YP_168868.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi
DSS-3]
gi|56680229|gb|AAV96895.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 2164
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 83/212 (39%), Gaps = 65/212 (30%)
Query: 362 LEYTASYEDLIQ-----------VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
L Y ASY+DLI IG+D H+ +G +E R++TF+ YL +
Sbjct: 1051 LNYVASYDDLIANDEVDNTSSNWTIGRD------HWVNYGQAENREVTFNPLQYLAANPS 1104
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ + G D AA RHYI G G + F A +Y+ ++ D
Sbjct: 1105 VYQLHGFDLTAATRHYIDTGHDAGLSRGDFDAEQYLKNYSD------------------- 1145
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+R+ FG+D AA RHYI HG GR DA
Sbjct: 1146 ------------------------MRSQFGADLSAATRHYIEHGRAAGRTDDAVSGAMTD 1181
Query: 531 ASHEDLINAFADAPDLV-----QAGKDHFSNF 557
A + + AD +++ AG+D+ + F
Sbjct: 1182 AEFAAWLTSLADQDEVIYLVEADAGEDNEATF 1213
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 58/191 (30%)
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ-------VGKDHFSN 472
G + + + +H E + +AF +L Y+AS++DLI A D V +G+DH+ N
Sbjct: 1031 GNSGKTFWSHKALE--DEEAF-SLNYVASYDDLI-----ANDEVDNTSSNWTIGRDHWVN 1082
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+G E R VTF+ YL + + + G D AA RHYI G G + F A +Y+ +
Sbjct: 1083 YGQAENREVTFNPLQYLAANPSVYQLHGFDLTAATRHYIDTGHDAGLSRGDFDAEQYLKN 1142
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
+ D+ + F G+D SAA +
Sbjct: 1143 YSDMRSQF-------------------------------------------GADLSAATR 1159
Query: 593 HYITHGMKEGR 603
HYI HG GR
Sbjct: 1160 HYIEHGRAAGR 1170
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA-------GKDHFSN 556
G + + + +H E + +AF +L Y+AS++DLI A D V G+DH+ N
Sbjct: 1031 GNSGKTFWSHKALE--DEEAF-SLNYVASYDDLI-----ANDEVDNTSSNWTIGRDHWVN 1082
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
+G E R +TFNP YL + ++ + G D +AA +HYI G G + G
Sbjct: 1083 YGQAENREVTFNPLQYLAANPSVYQLHGFDLTAATRHYIDTGHDAGLSRG 1132
>gi|209966394|ref|YP_002299309.1| hypothetical protein RC1_3132 [Rhodospirillum centenum SW]
gi|209959860|gb|ACJ00497.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 2485
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 97/237 (40%), Gaps = 28/237 (11%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND V G + +G+D DG SG+D A + +
Sbjct: 2258 GDEGNDSVFGGEGYDRLSGGTGDDTIDGGSGVDVVRIEAARSAVTLEATGPWGVRLSGAA 2317
Query: 333 HKQDFLSDVERLRFADQCID-SVNVKQRSILE----------YTASYEDLIQVIGQDVFE 381
D S VE +RF DQ + ++ V+ ++ Y A + D+ + F+
Sbjct: 2318 TGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLAQWADVRAAVADGRFQ 2377
Query: 382 S-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR-NVFGSDRGAAARHYITHGVKEGRNP 437
S ++H+ FG +EGRD T FD YL + D+R V + HY+ G +E R+P
Sbjct: 2378 SGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDRDP 2437
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFVT-FDSYLYLG 490
A+ DL PD+ G D H+ +G E R T D+ L+L
Sbjct: 2438 SAWF---------DLSAYLQRNPDVADAGIDPLRHWLVWGIGEDRIATAADTGLWLA 2485
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL + D+R R + HY+ G EGR+P F Y+A D+ A
Sbjct: 2355 FDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV 2414
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRS----------ITFNPDLYLTSYDDL--WNVF--GSD 586
+G +H+ FG+ E R + NPD+ D L W V+ G D
Sbjct: 2415 EAGQ--FHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDPLRHWLVWGIGED 2472
Query: 587 RSAAA 591
R A A
Sbjct: 2473 RIATA 2477
Score = 37.7 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 510 YITHGVK-EGRNPD---AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y+T V+ E PD AF Y+A D+ A AD Q+G +H+ FG EGR
Sbjct: 2337 YVTLPVRFEAVQPDGGGAFDEAFYLAQWADVRAAVADGR--FQSGLEHYLAFGQAEGRDP 2394
Query: 566 T--FNPDLYLTSYDDLW-NVFGSDRSAAAQHYITHGMKEGR 603
T F+ + YL + D+ V + +HY+ G +E R
Sbjct: 2395 TPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDR 2435
>gi|325981484|ref|YP_004293886.1| peptidase metallopeptidase [Nitrosomonas sp. AL212]
gi|325531003|gb|ADZ25724.1| peptidase metallopeptidase [Nitrosomonas sp. AL212]
Length = 588
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 152/382 (39%), Gaps = 100/382 (26%)
Query: 41 SFDITELNPNAQEVARWALGE----WSKVVDLTFEETSIHSDIKFISSNNG-------YV 89
S D+T PN ++V R + W D+ F S + F+ + G V
Sbjct: 104 SIDVT---PNPEDVGRVGASDINIGWIYRSDVNFAGISGGNSDNFLFNYTGGANDIFLNV 160
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP-GSYN--GGYPV 146
P+++ +++N T +HE+GH+LGL HP +YN G P+
Sbjct: 161 YAPKFNGDLTLDLN--------------TRARQTLVHELGHSLGLSHPHSTYNVSTGKPI 206
Query: 147 YGVDNDYENDSFLT-----------------SVMSY-----FMPQDSMMDASFGYCATPM 184
D D ++MSY +P S++ ++ TPM
Sbjct: 207 ITTDYAATKDLGFAQLGFRINSAEDMYKEYFTIMSYDNQHSLLPGSSVIFQAY----TPM 262
Query: 185 VSDIVAVQKIYGAPKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKN 241
+ D++A+Q+ YG G+ L N+ V +T +D+GG D +DL+ GG
Sbjct: 263 ILDVIALQQAYGEGTGTSGLSNDTITAGVAGY-----RTYFDTGGIDTIDLSEYAGGAYL 317
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTV------------------------IESVVGSS-- 275
+ +N S + + G + Q+T+ + ++G+S
Sbjct: 318 NMGVNITSAAHLVGVSVSTFDVQNTISLGKDPANLRWFYGEYEKASGSAAADRIIGNSLD 377
Query: 276 -------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIV 327
G+D++ G N+ S G+D +G G+D Y + + R + + V
Sbjct: 378 NRIDGEDGDDILTGGGGNDSLNGSGGDDNLNGQEGIDVAIYAGSHDAFTLTRNIISGVSV 437
Query: 328 YD-ANEHKQDFLSDVERLRFAD 348
+D A+ D L ++ER+ F+D
Sbjct: 438 HDNASIEGTDTLKEIERISFSD 459
>gi|89070671|ref|ZP_01157944.1| possible secreted protease [Oceanicola granulosus HTCC2516]
gi|89043751|gb|EAR49954.1| possible secreted protease [Oceanicola granulosus HTCC2516]
Length = 1409
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 177 FGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
+GY A PM DI A+Q YGA L +++Y + Q +I+D+GG D +
Sbjct: 728 YGYEAGPMALDIAALQHKYGANTTARLEDDVYVLPDQNAVGTTWTSIWDAGGIDAI--AY 785
Query: 236 IGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G +DL + S++ G TIA T+IE+ SG+D V GN+A
Sbjct: 786 EGASDAVVDLRAATLDYEHGGGGYLSAVEGIAGGYTIAAGTIIENASLGSGDDRVTGNAA 845
Query: 286 NNVFFESSGNDVFDGSSGLDTF 307
+N+F G+D G G DT
Sbjct: 846 DNIFSGGDGDDSLRGELGNDTI 867
>gi|254560811|ref|YP_003067906.1| amidase-like protein [Methylobacterium extorquens DM4]
gi|254268089|emb|CAX23964.1| putative amidase-related protein [Methylobacterium extorquens DM4]
Length = 1721
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 107/259 (41%), Gaps = 62/259 (23%)
Query: 377 QDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
Q ++ H+ +G EGRD F + YL + ++ G D H+ G KEG
Sbjct: 1484 QAQIDAEAHYAAYGWREGRDPNAAFSTGGYLAANPEVAAA-GLD---PLVHFAQAGWKEG 1539
Query: 435 RNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF---GCEEGRFV--------- 481
R+P A F Y+A H P+ G D S++ G EG
Sbjct: 1540 RDPAAGFDVERYLARH----------PEAQAAGLDPLSHYLAQGRAEGHVAHTAIGRPAD 1589
Query: 482 -----TFDSYLYLGSYDDLR---NVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIA 531
FD+ YL S D+ G D A AR HY T+G +EGRNP+A F Y+A
Sbjct: 1590 LAQQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNAVFDTKSYLA 1649
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSA 589
++ D+ A D H+ +G EEG S F+ YL + D+ A
Sbjct: 1650 AYGDVAAAGIDP-------LAHYVRYGAEEGHDPSAGFDGKAYLAANSDV---------A 1693
Query: 590 AAQ-----HYITHGMKEGR 603
AA HY+ +G EGR
Sbjct: 1694 AAGLNPMLHYLQYGAAEGR 1712
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 28/134 (20%)
Query: 399 FDSYLYLGSYDDLR---NVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLI 453
FD+ YL S D+ G D A AR HY T+G +EGRNP+A F Y+A++ D+
Sbjct: 1596 FDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNAVFDTKSYLAAYGDVA 1655
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAA---- 507
A D H+ +G EEG FD YL + D+ AAA
Sbjct: 1656 AAGIDP-------LAHYVRYGAEEGHDPSAGFDGKAYLAANSDV---------AAAGLNP 1699
Query: 508 -RHYITHGVKEGRN 520
HY+ +G EGR+
Sbjct: 1700 MLHYLQYGAAEGRS 1713
>gi|218529968|ref|YP_002420784.1| autotransporter-associated beta strand repeat protein
[Methylobacterium chloromethanicum CM4]
gi|218522271|gb|ACK82856.1| autotransporter-associated beta strand repeat protein
[Methylobacterium chloromethanicum CM4]
Length = 1806
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 107/259 (41%), Gaps = 62/259 (23%)
Query: 377 QDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
Q ++ H+ +G EGRD F + YL + ++ G D H+ G KEG
Sbjct: 1569 QAQIDAEAHYAAYGWREGRDPNAAFSTGGYLAANPEVAAA-GLD---PLVHFAQAGWKEG 1624
Query: 435 RNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF---GCEEGRFV--------- 481
R+P A F Y+A H P+ G D S++ G EG
Sbjct: 1625 RDPAAGFDVERYLARH----------PEARAAGLDPLSHYLAQGRAEGHVAHTAIGRPAD 1674
Query: 482 -----TFDSYLYLGSYDDLR---NVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIA 531
FD+ YL S D+ G D A AR HY T+G +EGRNP+A F Y+A
Sbjct: 1675 LAEQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNAVFDTKGYLA 1734
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSA 589
++ D+ A D H+ +G EGR S F+ YL + D+ A
Sbjct: 1735 AYGDVAAAGIDP-------LAHYVRYGAAEGRDPSAGFDGKAYLAANSDV---------A 1778
Query: 590 AAQ-----HYITHGMKEGR 603
AA HY+ +G EGR
Sbjct: 1779 AAGLNPMLHYLQYGAAEGR 1797
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 28/134 (20%)
Query: 399 FDSYLYLGSYDDLR---NVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLI 453
FD+ YL S D+ G D A AR HY T+G +EGRNP+A F Y+A++ D+
Sbjct: 1681 FDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNAVFDTKGYLAAYGDVA 1740
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAA---- 507
A D H+ +G EGR FD YL + D+ AAA
Sbjct: 1741 AAGIDP-------LAHYVRYGAAEGRDPSAGFDGKAYLAANSDV---------AAAGLNP 1784
Query: 508 -RHYITHGVKEGRN 520
HY+ +G EGR+
Sbjct: 1785 MLHYLQYGAAEGRS 1798
>gi|110632973|ref|YP_673181.1| peptidase, metallopeptidases [Mesorhizobium sp. BNC1]
gi|110283957|gb|ABG62016.1| peptidase, metallopeptidase [Chelativorans sp. BNC1]
Length = 745
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 125/312 (40%), Gaps = 65/312 (20%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
LN Q R A +S V ++TF E ++ H+D++ +S+ V T Y+
Sbjct: 56 LNSAQQAAGRAAFDIFSSVANITFSEIAETSNQHADLRLAASD--MVGTAW---AYYPST 110
Query: 103 NFDKADVWRYGIGKGTILSHNA--------LHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
+ DVW + G S A LHEIGHALGL H ++ G G
Sbjct: 111 RSEGGDVW-FNKSNGYYTSPQAGNYAFTTFLHEIGHALGLEH--AHEGHVMPAG------ 161
Query: 155 NDSFLTSVMSY-----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
DS +VMSY ++ +G+ + M+ DI A+Q +YGA + G Y
Sbjct: 162 RDSMEYTVMSYRSYVGASTTSGYVNEKWGFAQSLMMYDIAALQHMYGANYSTNSGATTYS 221
Query: 209 ---------IEVQQKDSP----FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
I +D P T++D GG D + + +DL +W++
Sbjct: 222 WSPTTGQMFINGTGQDMPGANRIFLTVWDGGGADTYNFSAYS-TSLKVDLRPGAWTTTSS 280
Query: 256 -------YEKNMTIAQH------------TVIESVVGSSGNDVVIGNSANNVFFESSGND 296
Y+ + A + ++IE+ G S +D + GN+A N + GND
Sbjct: 281 DQLARLHYDGSKLAAGNIANALLHGNDPRSLIENAKGGSASDRITGNTAVNKLCGNGGND 340
Query: 297 VFDGSSGLDTFF 308
+G G D
Sbjct: 341 TLNGMEGNDVLI 352
>gi|308801467|ref|XP_003078047.1| unnamed protein product [Ostreococcus tauri]
gi|116056498|emb|CAL52787.1| unnamed protein product [Ostreococcus tauri]
Length = 881
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 115/327 (35%), Gaps = 79/327 (24%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------------ 398
I ++ + Y A YEDL D HF++ G EGR +
Sbjct: 359 IAHCSISDADLKCYLARYEDLPWSQPND---GRTHFFKKGWMEGRTVKCAGDVDRYKYNF 415
Query: 399 --------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP--------DAFKA 442
+D+ Y+ +YDD+R FG D A HY G E R P D A
Sbjct: 416 DDAELMYDYDAVCYIDNYDDVRKAFGFDLTKAKTHYFIKGASEKRKPICTREPVIDNLDA 475
Query: 443 LEYIASHEDLINAFADAPDLVQVGKD--HFSNF--------------GCEEGRFVTFDSY 486
+ + ++ D+ F V D + F CE R D
Sbjct: 476 MCFASNFWDIHRYFGQYAGRVSQSTDIANIKTFMRVHHKQEARKKLSKCE--RVAPADFR 533
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD----------AFKALEYIASHEDL 536
YL Y ++ +D AA H++ G KEG+NP A K + +D
Sbjct: 534 CYLERYPEVPRSHANDIEAARTHWLHSGWKEGKNPKCDSRPHFYRHAMKDKHWPHIRDDD 593
Query: 537 INAFADA-PDLVQ-----AGK---DHFSNFGYEEGRSITFNP---------DLYLTSYDD 578
+ D PD+ + GK DH GR +P Y+ YDD
Sbjct: 594 AQCYLDRYPDIAKKYNHLTGKSKLDHAKIHYLRLGRRFRRDPTCAGPHEATKCYIARYDD 653
Query: 579 LWNVFGSDRS--AAAQHYITHGMKEGR 603
+ + +S AA+H T G++E R
Sbjct: 654 VRKAYMQHKSLAKAAEHMRTIGVQEER 680
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 91/267 (34%), Gaps = 54/267 (20%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSD 418
Y Y D+ + G D+ + KHF++ G EGR D YL Y+DL +D
Sbjct: 327 YLNRYADIFKKFGTDLEAAKKHFHDVGQHEGRIAHCSISDADLKCYLARYEDLPWSQPND 386
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
H+ G EGR ++ + D D
Sbjct: 387 ---GRTHFFKKGWMEGRTVKCAGDVDRYKYNFDDAELMYD-------------------- 423
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP--------DAFKALEYI 530
+D+ Y+ +YDD+R FG D A HY G E R P D A+ +
Sbjct: 424 ----YDAVCYIDNYDDVRKAFGFDLTKAKTHYFIKGASEKRKPICTREPVIDNLDAMCFA 479
Query: 531 ASHEDLINAFADAPDLVQAGKD-----------HFSNFGYEEGRSITFNP---DLYLTSY 576
++ D+ F V D H + + P YL Y
Sbjct: 480 SNFWDIHRYFGQYAGRVSQSTDIANIKTFMRVHHKQEARKKLSKCERVAPADFRCYLERY 539
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR 603
++ +D AA H++ G KEG+
Sbjct: 540 PEVPRSHANDIEAARTHWLHSGWKEGK 566
>gi|329847956|ref|ZP_08262984.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843019|gb|EGF92588.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 542
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G + ND + G++ +V +G+DV DG SGLDT Y Y I+R ++ +++
Sbjct: 219 DSLTGGTQNDTLSGDTGEDVLTGGAGDDVIDGGSGLDTAVYSGNKADYDIFRIDDGVVLR 278
Query: 329 D--ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
D N D L V+RL FAD + ++ R
Sbjct: 279 DLRPNGDGTDTLVLVDRLAFADGTVTMAHMLSRG 312
>gi|126741108|ref|ZP_01756790.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
gi|126717872|gb|EBA14592.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
Length = 284
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 37 THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS 96
+++++ +I+ L Q++ARWA W V ++ F ET + I F +++G +
Sbjct: 177 SNQITVNISGLTAAGQQLARWAFEAWEAVANIDFVETLGSAQITFDDNDSGAYASSSTSG 236
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHN---ALHEIGHALGLMHPGSYNG 142
+ + + W G TI S++ +HEIGHALGL H G YNG
Sbjct: 237 TTILSSEVNVSTAWLANSGT-TIDSYSFSTYVHEIGHALGLGHQGDYNG 284
>gi|209963360|ref|YP_002296275.1| hypothetical protein RC1_0011 [Rhodospirillum centenum SW]
gi|209956826|gb|ACI97462.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 1110
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 31/230 (13%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND V G + +G+D DG SG+D A + +
Sbjct: 883 GDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEAAGPWGVRLSGAA 942
Query: 333 HKQDFLSDVERLRFADQCI-DSVNVKQRSILE----------YTASYEDLIQVI--GQDV 379
D S VE +RF DQ + ++ V+ ++ Y A + D+ + GQ V
Sbjct: 943 TGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLARWADVRAAVNAGQ-V 1001
Query: 380 FESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRN 436
++H+ FG +EGRD T FD YL + D+R + + + HY+ G +E R+
Sbjct: 1002 MSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDRD 1061
Query: 437 PDA-FKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFVT 482
P A F Y+ + PD+ G D H+ +G E R T
Sbjct: 1062 PSAWFDLSAYLQRN----------PDVADAGIDPLRHWLVWGIGENRIAT 1101
>gi|195353242|ref|XP_002043114.1| GM11800 [Drosophila sechellia]
gi|194127202|gb|EDW49245.1| GM11800 [Drosophila sechellia]
Length = 610
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 166 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 224
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 225 DAHFDDAELWTIGTPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 284
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 285 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 326
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 327 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 375
>gi|23011040|ref|ZP_00051528.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 301
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTF------------FYYAPSYLYKIYRFENA 324
ND + G++ N+ F GND G SG+DT F +A + + +
Sbjct: 94 NDTLFGDAGNDTAFGDDGNDRMSGGSGIDTLDGALGVDTAVFDFAFAQAGVSSAGTL--S 151
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESM 383
+I A ++ D + + E F+D+ I + Q L Y + Y+D+ ++ ++
Sbjct: 152 VI---AGQNSTDTVKNTEIFEFSDRSIVQGDGNQSVDDLFYFSHYDDVY----KNGIDAE 204
Query: 384 KHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAA-----RHYITHGVKEGRN 436
H+ +G EGRD FD+ YL Y D+ AAA HY+T+G KEGR+
Sbjct: 205 AHYSTYGWKEGRDPNAFFDTKGYLTVYTDV---------AAAGINPLEHYLTYGWKEGRD 255
Query: 437 PDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
P A F +Y+A + D+ A + P L H+ G EGR T+D
Sbjct: 256 PSAQFDTKQYLAVNGDVAAAGIN-PLL------HYLENGAVEGR-ATYD 296
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 30/132 (22%)
Query: 482 TFDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
+ D Y YDD+ +N G D A HY T+G KEGR+P+A F Y+ + D+ A
Sbjct: 183 SVDDLFYFSHYDDVYKN--GID---AEAHYSTYGWKEGRDPNAFFDTKGYLTVYTDVAAA 237
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQ----- 592
+ +H+ +G++EGR S F+ YL D+ AAA
Sbjct: 238 GINP-------LEHYLTYGWKEGRDPSAQFDTKQYLAVNGDV---------AAAGINPLL 281
Query: 593 HYITHGMKEGRA 604
HY+ +G EGRA
Sbjct: 282 HYLENGAVEGRA 293
>gi|238757394|ref|ZP_04618580.1| Metalloprotease [Yersinia aldovae ATCC 35236]
gi|238704433|gb|EEP96964.1| Metalloprotease [Yersinia aldovae ATCC 35236]
Length = 206
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
++ + + I+D+ G+D LD + V IDL +S GG N++IA +T IE+
Sbjct: 1 MENEKQQIVHCIWDADGNDTLDFSGYS-VDQIIDLRPGHFSCTGGLYYNVSIAFNTFIEN 59
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+G SG+D + GN NN SGND +G +G D +
Sbjct: 60 AIGGSGDDYLKGNKGNNTLKGESGNDELEGGAGADDLW 97
>gi|172055141|ref|YP_001806468.1| hypothetical protein cce_5056 [Cyanothece sp. ATCC 51142]
gi|171701422|gb|ACB54402.1| hypothetical protein cce_5056 [Cyanothece sp. ATCC 51142]
Length = 284
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAA 422
Y ASY DLIQ G D ++ H+ G +EGRD F++ YL +Y D+R+ +G + A
Sbjct: 206 YIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFNAAQYLENYGDIRDTYGLNADLA 265
Query: 423 ARHYITHGVKEGR 435
+H+I +G EGR
Sbjct: 266 TKHFIANGFAEGR 278
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD +LY+ SY DL FG D AA HY+ G EGR+ F A +Y+ ++ D+ + +
Sbjct: 201 FDEHLYIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFNAAQYLENYGDIRDTYGL 260
Query: 543 APDLVQAGKDHFSNFGYEEGRS 564
DL HF G+ EGR+
Sbjct: 261 NADL---ATKHFIANGFAEGRT 279
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
FD +LY+ SY DL FG D AA HY+ G EGR+ F A +Y+ ++ D+ + +
Sbjct: 201 FDEHLYIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFNAAQYLENYGDIRDTYGL 260
Query: 459 APDLVQVGKDHFSNFGCEEGR 479
DL HF G EGR
Sbjct: 261 NADL---ATKHFIANGFAEGR 278
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 438 DAFKALEYIASHEDLINAFA-DAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDL 495
D F YIAS+ DLI AF D + DH+ G EGR F++ YL +Y D+
Sbjct: 199 DNFDEHLYIASYGDLIQAFGYDG----EAALDHYLMMGATEGRDQHRFNAAQYLENYGDI 254
Query: 496 RNVFGSDRGAAARHYITHGVKEGR 519
R+ +G + A +H+I +G EGR
Sbjct: 255 RDTYGLNADLATKHFIANGFAEGR 278
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 522 DAFKALEYIASHEDLINAFA-DAPDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSYDDL 579
D F YIAS+ DLI AF D +A DH+ G EGR FN YL +Y D+
Sbjct: 199 DNFDEHLYIASYGDLIQAFGYDG----EAALDHYLMMGATEGRDQHRFNAAQYLENYGDI 254
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRA 604
+ +G + A +H+I +G EGR
Sbjct: 255 RDTYGLNADLATKHFIANGFAEGRT 279
>gi|188581753|ref|YP_001925198.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
gi|179345251|gb|ACB80663.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
Length = 361
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND + G+ N+ + +G + DG++GLDT + + ++
Sbjct: 155 DTLYGDAGNDTLFGDFGNDQMWGGTGTNTLDGAAGLDTAVFDFSFAQAGVTSSGTLSVIT 214
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKHFY 387
AN D + + E F+D+ I + L Y + Y D+ Q+ ++ +HF
Sbjct: 215 GAN--SVDTVKNTEAFAFSDRTILQADGNAAVDDLFYLSQYRDVY----QNGNDAEQHFR 268
Query: 388 EFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 444
++G EGR+ FD+ YL + G D +HY+T+G KEGR+P F
Sbjct: 269 DYGWKEGRNPNAFFDTKGYL-AAYADVAAAGID---PLQHYLTYGWKEGRDPSTQFDTKA 324
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
Y+A++ D + A P L H+ +G EGR
Sbjct: 325 YLAAYGD-VAAEGINPLL------HYLQYGAVEGR 352
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 22/125 (17%)
Query: 484 DSYLYLGSYDDLRNVF--GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
D YL Y R+V+ G+D A +H+ +G KEGRNP+A F Y+A++ +
Sbjct: 245 DDLFYLSQY---RDVYQNGND---AEQHFRDYGWKEGRNPNAFFDTKGYLAAYA---DVA 295
Query: 541 ADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
A D +Q H+ +G++EGR S F+ YL +Y D+ ++ HY+ +G
Sbjct: 296 AAGIDPLQ----HYLTYGWKEGRDPSTQFDTKAYLAAYGDV----AAEGINPLLHYLQYG 347
Query: 599 MKEGR 603
EGR
Sbjct: 348 AVEGR 352
>gi|195586513|ref|XP_002083018.1| GD24926 [Drosophila simulans]
gi|194195027|gb|EDX08603.1| GD24926 [Drosophila simulans]
Length = 536
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 169 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 227
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 228 DAHFDDAELWTIGTPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 287
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 288 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 329
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 330 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 378
>gi|189220078|ref|YP_001940718.1| glycosyltransferase [Methylacidiphilum infernorum V4]
gi|189186936|gb|ACD84121.1| Glycosyltransferase [Methylacidiphilum infernorum V4]
Length = 1154
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
R FD YLG Y D++ G D HYI HG KEGRNP+ + Y +
Sbjct: 512 RSSLFDRAYYLGQYPDVQEA-GID---PLLHYIRHGWKEGRNPNPYFDSAYYLEKNPEVK 567
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A P L HF G +EGR FD LYL + +LR + G + +H++
Sbjct: 568 AAGVNPLL------HFIENGWKEGRNPHPDFDLDLYLETQPELR-LSGVN---PLKHFLE 617
Query: 513 H------GVKEGR-NPDAFKALEYIASHE-DLINAFADAPDLVQAGKD---HFSNFGYEE 561
G G+ P+ + L+ + S D PD+ +AG D H+ G++E
Sbjct: 618 SVKSLEGGTAPGQGTPERGQYLKILRSSLFDKAYYLGQYPDVQEAGIDPLLHYIRHGWKE 677
Query: 562 GRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQ---HYITHGMKEGR 603
GR+ FN YL D+ ++A H+I +G KEGR
Sbjct: 678 GRNPNPYFNSAYYLEKNPDV-------KAAGVNPLLHFIENGWKEGR 717
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
FD Y Y D++ G+D HY+ HG KEG+NP+ + Y + A
Sbjct: 385 FDPGYYWSCYPDVKKA-GAD---PLLHYVRHGWKEGKNPNPYFDSAYYLEKNPEVKAAGV 440
Query: 459 APDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH--- 513
P L HF G +EGR FD LYL + ++R + G + +H++
Sbjct: 441 NPLL------HFIENGWKEGRNPHPDFDLDLYLETQPEVR-LSGVN---PLKHFLESVKS 490
Query: 514 ---GVKEGR-NPDAFKALEYIASHE-DLINAFADAPDLVQAGKD---HFSNFGYEEGRSI 565
G G+ P+ + L+ + S D PD+ +AG D H+ G++EGR
Sbjct: 491 LEGGTAPGQGTPERGQYLKILRSSLFDRAYYLGQYPDVQEAGIDPLLHYIRHGWKEGR-- 548
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAA-----QHYITHGMKEGR 603
NP+ Y +D + + + AA H+I +G KEGR
Sbjct: 549 --NPNPY---FDSAYYLEKNPEVKAAGVNPLLHFIENGWKEGR 586
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 382 SMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITH------GVKE 433
+ HF E G EGR+ FD LYL + +LR + G + +H++ G
Sbjct: 573 PLLHFIENGWKEGRNPHPDFDLDLYLETQPELR-LSGVN---PLKHFLESVKSLEGGTAP 628
Query: 434 GR-NPDAFKALEYIASHE-DLINAFADAPDLVQVGKD---HFSNFGCEEGRFVT--FDSY 486
G+ P+ + L+ + S D PD+ + G D H+ G +EGR F+S
Sbjct: 629 GQGTPERGQYLKILRSSLFDKAYYLGQYPDVQEAGIDPLLHYIRHGWKEGRNPNPYFNSA 688
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
YL D++ G + H+I +G KEGRNP DL + PD+
Sbjct: 689 YYLEKNPDVKAA-GVN---PLLHFIENGWKEGRNPH---------PDFDLRSYLERYPDV 735
Query: 547 VQAGKD---HFSNFGYEEGR 563
QA + H+ ++G +E R
Sbjct: 736 KQAQVNPLWHYLHYGQKENR 755
>gi|320544342|ref|NP_001188999.1| matrix metalloproteinase 1, isoform E [Drosophila melanogaster]
gi|318068685|gb|ADV37245.1| matrix metalloproteinase 1, isoform E [Drosophila melanogaster]
Length = 542
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 258
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 259 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 300
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 301 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 349
>gi|218530744|ref|YP_002421560.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|254561713|ref|YP_003068808.1| hypothetical protein METDI3303 [Methylobacterium extorquens DM4]
gi|218523047|gb|ACK83632.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|254268991|emb|CAX24952.1| hypothetical protein METDI3303 [Methylobacterium extorquens DM4]
Length = 361
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 36/243 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSG 303
+ G E + T+ + V G GNDV+ G++ N+V F GND DG+ G
Sbjct: 130 VAGGEDDDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLFGDYGNDRMSGGTGTNTLDGALG 189
Query: 304 LDTF---FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR- 359
+DT F +A + + + A ++ D + + E FAD+ I + Q
Sbjct: 190 IDTAVFNFNFAQAGVTSAGTLSSI-----AGQNSLDTVKNTEVFAFADRSILQGDGNQAV 244
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
L Y + Y D+ ++ ++ +HF ++G EGR+ FD+ YL + G
Sbjct: 245 DDLFYLSQYGDVY----RNGNDAEQHFSDYGWKEGRNPNAFFDTKGYL-AAYADVAAAGI 299
Query: 418 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ HY+T+G KEGR+P A F +Y+A++ D+ A + P L H+ +G
Sbjct: 300 N---PLEHYLTYGWKEGRDPSAQFDTKQYLAANGDVAAAGLN-PLL------HYLEYGAV 349
Query: 477 EGR 479
EGR
Sbjct: 350 EGR 352
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 156/412 (37%), Gaps = 85/412 (20%)
Query: 219 IQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ TI + GD++L+ TL +G + N + + ++ I G + N TI ++ + G
Sbjct: 1 MATISGTNGDNVLNGTLQDDVILGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAG 60
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + G + ++ GND G G D YA + + E
Sbjct: 61 GPGNDTIYGGNGSDQLIGEIGNDTIYGQDGDD----YAAGNPGDDVLYGGRGNDFFVGEQ 116
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV-IGQDVFESMKHFYEFGLS 392
D L F ++ D V + Y DL+ +G DV FG
Sbjct: 117 GAD-------LVFGEEGNDFVAGGEDDDTVYGGDGNDLVDGDLGNDVL--------FG-D 160
Query: 393 EGRDITFDSY----LYLGS-YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D+ F Y + G+ + L G D ++ GV + L IA
Sbjct: 161 AGNDVLFGDYGNDRMSGGTGTNTLDGALGIDTAVFNFNFAQAGVT------SAGTLSSIA 214
Query: 448 SHEDL-------INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL-RNVF 499
L + AFAD L G D YL Y D+ RN
Sbjct: 215 GQNSLDTVKNTEVFAFADRSILQGDGNQ-------------AVDDLFYLSQYGDVYRN-- 259
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G+D A +H+ +G KEGRNP+AF + + + A P +H+ +G+
Sbjct: 260 GND---AEQHFSDYGWKEGRNPNAFFDTKGYLAAYADVAAAGINP------LEHYLTYGW 310
Query: 560 EEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQ-----HYITHGMKEGRA 604
+EGR S F+ YL + D+ AAA HY+ +G EGRA
Sbjct: 311 KEGRDPSAQFDTKQYLAANGDV---------AAAGLNPLLHYLEYGAVEGRA 353
>gi|148241799|ref|YP_001226956.1| hypothetical protein SynRCC307_0700 [Synechococcus sp. RCC307]
gi|147850109|emb|CAK27603.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 404
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 118/286 (41%), Gaps = 70/286 (24%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHS----DIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
Q VAR ++DL FE T +S D++ S G C ++E+
Sbjct: 52 QTVARL-----DNIIDLDFEYTGNYSQSVIDVRLNDS--GPFCGQAAAMDGYIEL----- 99
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
D+W G + +HE+GHALGL PG + ++ D + MSY
Sbjct: 100 DIWTNGS-NSNDRKNTFIHELGHALGLGEPG----------WNRRWDQDD---TAMSYNK 145
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAP----------KGSLGNNIYKIEVQQKDSP 217
GY SDI A+ I+G K +L NN+Y + K
Sbjct: 146 GN------VGGYATWYRSSDINALISIWGRENDHKNQTQRGKANLANNLYGGKGNDKLFG 199
Query: 218 FIQTIYDSGGD-------DLLDLTLIGGV----------KNYIDLNTESWSSIG-GYEKN 259
++ SGG+ L + T+ GG N I+LNT SW + G G ++
Sbjct: 200 GNKSDILSGGNGADSLFASLGNDTINGGSGRDTAQFSSRSNRINLNTTSWQNTGDGRDRL 259
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++I E+V SGNDVV GN N +G+DV +G++G D
Sbjct: 260 ISI------ENVNAGSGNDVVTGNRGANTLKGQNGHDVLNGAAGRD 299
>gi|227819048|ref|YP_002823019.1| protease [Sinorhizobium fredii NGR234]
gi|227338047|gb|ACP22266.1| possible protease [Sinorhizobium fredii NGR234]
Length = 551
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 114/301 (37%), Gaps = 73/301 (24%)
Query: 61 EWSKVVDLTF----EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-RYGIG 115
+++ V ++T E + H D++ SS+ P YF + D W G
Sbjct: 70 QFASVANVTLTEITESATKHGDLRLASSD-----APSTAWAYFPSTAAEGGDAWFDKSSG 124
Query: 116 ------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY---- 165
KG LHEIGHALGL H N P DS +VMSY
Sbjct: 125 YYSRPVKGNYAYTTFLHEIGHALGLEHAHEGNV-MPA-------NRDSMEYTVMSYRSYV 176
Query: 166 -FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI----------YKIEVQQK 214
+ ++G+ + M+ DI A+Q +YGA + N I +
Sbjct: 177 GASTTTGYTNETWGFAQSLMMYDIAAIQHMYGADFTTHSENTTYCWNQATGEMSINGVAQ 236
Query: 215 DSP----FIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYE-------- 257
+P + T++D GG D D + NY +DL W++ +
Sbjct: 237 GAPGGNKILLTVWDGGGIDTYDFS------NYATALKVDLRPGEWTTTSSAQLARLRYDG 290
Query: 258 -----KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
N+ A ++IE+ G +GND + GN+A N + ++G D G G D
Sbjct: 291 SKVAVGNIANALQYKGDARSLIENAKGGAGNDTITGNAAANTLWGNAGKDTLIGGDGNDN 350
Query: 307 F 307
Sbjct: 351 L 351
>gi|320544352|ref|NP_001189004.1| matrix metalloproteinase 1, isoform J [Drosophila melanogaster]
gi|318068690|gb|ADV37250.1| matrix metalloproteinase 1, isoform J [Drosophila melanogaster]
Length = 512
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 258
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 259 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 300
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 301 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 349
>gi|11228711|gb|AAG33131.1|AF271666_1 matrix metalloproteinase 1 [Drosophila melanogaster]
Length = 567
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 166 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 224
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 225 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 284
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 285 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 326
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 327 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 375
>gi|221468755|ref|NP_726473.2| matrix metalloproteinase 1, isoform C [Drosophila melanogaster]
gi|21392160|gb|AAM48434.1| RE62222p [Drosophila melanogaster]
gi|60677889|gb|AAX33451.1| RE19818p [Drosophila melanogaster]
gi|220902386|gb|AAF47255.3| matrix metalloproteinase 1, isoform C [Drosophila melanogaster]
Length = 584
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 258
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 259 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 300
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 301 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 349
>gi|291540389|emb|CBL13500.1| Uncharacterized vancomycin resistance protein [Roseburia
intestinalis XB6B4]
Length = 289
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 552 DHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
+HF N+G EGRS + FNP Y Y DL FG D +A +HY+T G EGR G +G
Sbjct: 68 NHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAAYCRHYVTCGKAEGRDGGGTG 127
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y ++Y D+ G + HF +GL EGR + F+ Y Y DL+ FG D A
Sbjct: 48 YRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAA 107
Query: 422 AARHYITHGVKEGRN 436
RHY+T G EGR+
Sbjct: 108 YCRHYVTCGKAEGRD 122
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 468 DHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+HF N+G EGR + F+ Y Y DL+ FG D A RHY+T G EGR+
Sbjct: 68 NHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAAYCRHYVTCGKAEGRD 122
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D D+ + H+ G EGR
Sbjct: 103 D--DMAAYCR-HYVTCGKAEGR 121
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 458 DAPDLVQVGKDHFSNFGCEEGR 479
D D+ + H+ G EGR
Sbjct: 103 D--DMAAYCR-HYVTCGKAEGR 121
>gi|206597316|gb|ACI15752.1| FI01410p [Drosophila melanogaster]
Length = 613
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 169 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 227
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 228 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 287
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 288 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 329
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 330 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 378
>gi|240143531|ref|ZP_04742132.1| VanW domain protein [Roseburia intestinalis L1-82]
gi|257204568|gb|EEV02853.1| VanW domain protein [Roseburia intestinalis L1-82]
Length = 293
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 552 DHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
+HF N+G EGRS + FNP Y Y DL FG D +A +HY+T G EGR G +G
Sbjct: 68 NHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAAYCRHYVTCGKAEGRDGGGTG 127
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y ++Y D+ G + HF +GL EGR + F+ Y Y DL+ FG D A
Sbjct: 48 YRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAA 107
Query: 422 AARHYITHGVKEGRN 436
RHY+T G EGR+
Sbjct: 108 YCRHYVTCGKAEGRD 122
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 468 DHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+HF N+G EGR + F+ Y Y DL+ FG D A RHY+T G EGR+
Sbjct: 68 NHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAAYCRHYVTCGKAEGRD 122
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D D+ + H+ G EGR
Sbjct: 103 D--DMAAYCR-HYVTCGKAEGR 121
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 458 DAPDLVQVGKDHFSNFGCEEGR 479
D D+ + H+ G EGR
Sbjct: 103 D--DMAAYCR-HYVTCGKAEGR 121
>gi|221468756|ref|NP_523852.3| matrix metalloproteinase 1, isoform D [Drosophila melanogaster]
gi|320544344|ref|NP_001189000.1| matrix metalloproteinase 1, isoform F [Drosophila melanogaster]
gi|320544346|ref|NP_001189001.1| matrix metalloproteinase 1, isoform G [Drosophila melanogaster]
gi|220902387|gb|AAM68327.2| matrix metalloproteinase 1, isoform D [Drosophila melanogaster]
gi|318068686|gb|ADV37246.1| matrix metalloproteinase 1, isoform F [Drosophila melanogaster]
gi|318068687|gb|ADV37247.1| matrix metalloproteinase 1, isoform G [Drosophila melanogaster]
Length = 541
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 258
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 259 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 300
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 301 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 349
>gi|163851992|ref|YP_001640035.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|240139119|ref|YP_002963594.1| hypothetical protein MexAM1_META1p2539 [Methylobacterium extorquens
AM1]
gi|163663597|gb|ABY30964.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|240009091|gb|ACS40317.1| hypothetical protein MexAM1_META1p2539 [Methylobacterium extorquens
AM1]
Length = 361
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 36/243 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSG 303
+ G E + T+ + V G GNDV+ G++ N+V F GND DG+ G
Sbjct: 130 VAGGEDDDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLFGDYGNDRMSGGTGTNTLDGALG 189
Query: 304 LDTF---FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR- 359
+DT F +A + + + A ++ D + + E FAD+ I + Q
Sbjct: 190 IDTAVFNFNFAQAGVTSAGTLSSI-----AGQNSLDTVKNTEVFAFADRSILQGDGNQAV 244
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
L Y + Y D+ ++ ++ +HF ++G EGR+ FD+ YL + G
Sbjct: 245 DDLFYLSRYGDVY----RNGNDAEQHFSDYGWKEGRNPNAFFDTKGYL-AAYADVAAAGI 299
Query: 418 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ HY+T+G KEGR+P A F +Y+A++ D+ A + P L H+ +G
Sbjct: 300 N---PLEHYLTYGWKEGRDPSAQFDTKQYLAANGDVAAAGLN-PLL------HYLEYGAV 349
Query: 477 EGR 479
EGR
Sbjct: 350 EGR 352
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 156/412 (37%), Gaps = 85/412 (20%)
Query: 219 IQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ TI + GD++L+ TL +G + N + + ++ I G + N TI ++ + G
Sbjct: 1 MATISGTNGDNVLNGTLQDDVILGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAG 60
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + G + ++ GND G G D YA + + E
Sbjct: 61 GPGNDTIYGGNGSDQLIGEIGNDTIYGQDGDD----YAAGNPGDDVLYGGRGNDFFVGEQ 116
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV-IGQDVFESMKHFYEFGLS 392
D L F ++ D V + Y DL+ +G DV FG
Sbjct: 117 GAD-------LVFGEEGNDFVAGGEDDDTVYGGDGNDLVDGDLGNDVL--------FG-D 160
Query: 393 EGRDITFDSY----LYLGS-YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D+ F Y + G+ + L G D ++ GV + L IA
Sbjct: 161 AGNDVLFGDYGNDRMSGGTGTNTLDGALGIDTAVFNFNFAQAGVT------SAGTLSSIA 214
Query: 448 SHEDL-------INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL-RNVF 499
L + AFAD L G D YL Y D+ RN
Sbjct: 215 GQNSLDTVKNTEVFAFADRSILQGDGNQ-------------AVDDLFYLSRYGDVYRN-- 259
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G+D A +H+ +G KEGRNP+AF + + + A P +H+ +G+
Sbjct: 260 GND---AEQHFSDYGWKEGRNPNAFFDTKGYLAAYADVAAAGINP------LEHYLTYGW 310
Query: 560 EEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQ-----HYITHGMKEGRA 604
+EGR S F+ YL + D+ AAA HY+ +G EGRA
Sbjct: 311 KEGRDPSAQFDTKQYLAANGDV---------AAAGLNPLLHYLEYGAVEGRA 353
>gi|291537156|emb|CBL10268.1| Uncharacterized vancomycin resistance protein [Roseburia
intestinalis M50/1]
Length = 293
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 552 DHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
+HF N+G EGRS + FNP Y Y DL FG D +A +HY+T G EGR G +G
Sbjct: 68 NHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAAYCRHYVTCGKAEGRDGGGTG 127
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y ++Y D+ G + HF +GL EGR + F+ Y Y DL+ FG D A
Sbjct: 48 YRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAA 107
Query: 422 AARHYITHGVKEGRN 436
RHY+T G EGR+
Sbjct: 108 YCRHYVTCGKAEGRD 122
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 468 DHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+HF N+G EGR + F+ Y Y DL+ FG D A RHY+T G EGR+
Sbjct: 68 NHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFGDDMAAYCRHYVTCGKAEGRD 122
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D D+ + H+ G EGR
Sbjct: 103 D--DMAAYCR-HYVTCGKAEGR 121
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 458 DAPDLVQVGKDHFSNFGCEEGR 479
D D+ + H+ G EGR
Sbjct: 103 D--DMAAYCR-HYVTCGKAEGR 121
>gi|33866440|ref|NP_897999.1| Zn-dependent metalloprotease [Synechococcus sp. WH 8102]
gi|33633218|emb|CAE08423.1| Possible Zn-dependent metalloprotease [Synechococcus sp. WH 8102]
Length = 391
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 64/294 (21%)
Query: 87 GYVCTPRYDS-RYFMEIN---FDKAD-VWRYGIGKGTILSHNALHEIGHALGLMHP---G 138
G+ TP DS + IN + AD ++ I G+ LHE+ HA+GL HP G
Sbjct: 44 GFAYTPGTDSDEGLVAINWSTYQNADGSFKNSIASGSFYGITFLHELSHAVGLKHPHDRG 103
Query: 139 SYNGGYPVY-GV---------DNDYENDSFLTSVMSYF--MPQDSMMDAS---FGYCATP 183
+ G P + G+ D++ ++ + ++Y ++ M+ S +G+ T
Sbjct: 104 LF--GQPRFPGLTHRSNEFRDKGDFDQNAHPFTQLTYVDKGARNGMVPRSIEAYGFLQTL 161
Query: 184 MVSDIVAVQKIYGA-PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN- 241
DI A+Q +YG P + G++ Y + ++ ++ + I+D+GG +D GG
Sbjct: 162 GALDIAALQWMYGINPDAASGDDTYTLPLENREGTGWRAIWDTGG---VDRITAGGATAP 218
Query: 242 -YIDLNTESWS---SIGGYEK-------NMTIAQH------------TVIESVVGSSGND 278
IDL + + GGY TIA VIE +G G+D
Sbjct: 219 VTIDLRNATLGDDVNAGGYVSRAEDVFGGFTIAHDWYGRNVGQSAGLCVIEIAIGGKGDD 278
Query: 279 VVIGNSANNVFFESSGNDVF----------DGSSGLDTFFYYAP-SYLYKIYRF 321
V+IGN A+N+ G DV G G D F+ A L K+ F
Sbjct: 279 VLIGNRADNLLKGKKGADVLVAGGGDGNRVTGGKGRDQFWISAQHGALVKVTDF 332
>gi|284515810|gb|ADB91412.1| MIP15906p [Drosophila melanogaster]
Length = 541
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 169 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 227
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 228 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 287
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 288 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 329
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 330 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 378
>gi|195489771|ref|XP_002092878.1| GE11424 [Drosophila yakuba]
gi|194178979|gb|EDW92590.1| GE11424 [Drosophila yakuba]
Length = 586
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D+D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSAALMAPFYRGFEPVFKLDDD 258
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 259 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYTPPKVPLDDSIC----- 300
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 301 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 349
>gi|320544348|ref|NP_001189002.1| matrix metalloproteinase 1, isoform H [Drosophila melanogaster]
gi|318068688|gb|ADV37248.1| matrix metalloproteinase 1, isoform H [Drosophila melanogaster]
Length = 554
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 258
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 259 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 300
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 301 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 349
>gi|71281942|ref|YP_268540.1| putative protease [Colwellia psychrerythraea 34H]
gi|71147682|gb|AAZ28155.1| putative protease [Colwellia psychrerythraea 34H]
Length = 656
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 47/233 (20%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
EN++ SVM+ P+ + + + T DIV +Q +YG P +K+E
Sbjct: 213 ENNNDFYSVMA---PKATGLSSETFAPTTLKKYDIVMLQHLYGKP--------FKVETDP 261
Query: 214 KDS-------PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE--------- 257
+ F Q I D G+D + + + N IDL+ ++SSI
Sbjct: 262 NMTYNYDDSYDFHQMIVDKDGEDTISV-VNSQRSNIIDLHPGAFSSIASRPTGFFDPDTE 320
Query: 258 --------KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDG 300
N++I T IE+ G S NDV+IGN N ++ GND+ DG
Sbjct: 321 SEHLNRSYNNLSIDYGTRIENAEGGSNNDVLIGNYTANKLNGNAGDDKIQGYGGNDLIDG 380
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQCI 351
+G+DT Y Y+I N++ V + D L+++E ++F+D+ I
Sbjct: 381 GAGIDTAVYANEKVQYEIEYVGNSVTVLTLPSGNEGLDTLTNIEFIQFSDETI 433
>gi|83312521|ref|YP_422785.1| hypothetical protein amb3422 [Magnetospirillum magneticum AMB-1]
gi|82947362|dbj|BAE52226.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 9529
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+T+A + +++VG SGNDV+ G S + F GND+ +G SG D + + Y+I
Sbjct: 2429 VTVASGSGADTLVGGSGNDVLSGGSGADTFTGGLGNDIINGGSGADKAIFSGAAADYRIS 2488
Query: 320 RFENAIIVYDANEH-----KQDFLSDVERLRFADQC 350
+ V D N D LS +E L+F+D+
Sbjct: 2489 MTNGTVTVVDTNPTLNGNDGTDTLSGIETLQFSDRS 2524
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+ SG ++G N+ F SGND+F+G +G DT ++ + Y I ++V D
Sbjct: 3682 VIAGSGATSLLGGVGNDTFTGGSGNDLFNGGTGTDTAKFHGNAAGYSIRAASGGVVVQDT 3741
Query: 331 N----EHKQDFLSDVERLRFADQCI 351
N D L+ VE L FAD+ +
Sbjct: 3742 NTVDGNDGTDSLAGVETLVFADRTL 3766
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN----EHK 334
VIG + F SGNDVFDG G D ++ Y+I + V D N
Sbjct: 3086 TVIGGFGADTFTGGSGNDVFDGGFGADQARFHGNLDGYRISTGTGGVTVTDINTVGGNDG 3145
Query: 335 QDFLSDVERLRFADQCI 351
D LS VE L FAD+ +
Sbjct: 3146 TDTLSGVETLVFADRTL 3162
>gi|99077980|ref|YP_611239.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Ruegeria sp.
TM1040]
gi|99034923|gb|ABF61977.1| peptidase S8 and S53 subtilisin kexin sedolisin [Ruegeria sp.
TM1040]
Length = 862
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-AII 326
IESV GND + G++ NNVF GND +G G+D A + Y + +N A+
Sbjct: 571 IESVYTGDGNDNLTGDAGNNVFQAGRGNDTINGGDGIDQAVVLANQFNYSVAINKNGAVT 630
Query: 327 VYDANEHK-QDFLSDVERLRFADQCID 352
V D N + +D L+D+E ++FAD +D
Sbjct: 631 VTDRNASEGEDGLTDIEMIKFADATLD 657
>gi|320544350|ref|NP_001189003.1| matrix metalloproteinase 1, isoform I [Drosophila melanogaster]
gi|320544354|ref|NP_001189005.1| matrix metalloproteinase 1, isoform K [Drosophila melanogaster]
gi|318068689|gb|ADV37249.1| matrix metalloproteinase 1, isoform I [Drosophila melanogaster]
gi|318068691|gb|ADV37251.1| matrix metalloproteinase 1, isoform K [Drosophila melanogaster]
Length = 528
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 258
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + + Y AT Q+ Y PK L ++I
Sbjct: 259 DK-----AAIQSLYGRKTNQLRPTNVYPAT--------TQRPYSPPKVPLDDSIC----- 300
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KDS + T+++S GD LT + Y L ++ W + G
Sbjct: 301 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG 349
>gi|116250562|ref|YP_766400.1| rhizobiocin [Rhizobium leguminosarum bv. viciae 3841]
gi|115255210|emb|CAK06284.1| putative calcium binding RTX Zn-metalloprotease [Rhizobium
leguminosarum bv. viciae 3841]
Length = 1585
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 100/238 (42%), Gaps = 68/238 (28%)
Query: 121 SHNALHEIGHALGLMH------------PGSYNGGYPVYGVDNDYENDSFLTSVMSY-FM 167
SH HE+GHALGL H PG+Y DS ++M+Y
Sbjct: 148 SHTLAHELGHALGLKHAQEGYNLNLTVVPGAY---------------DSLEYTIMTYRTF 192
Query: 168 PQDSMMDASFGYCATP---MVSDIVAVQKIYGAP-KGSLGNNIYK-------------IE 210
D++ + + P M+ DI A+Q++YGA + G+ +YK
Sbjct: 193 VGDNLYGYKYEHDGAPQTFMMLDIAALQEMYGADYTTNSGDTVYKWNPNQGITYVNGVAA 252
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWS--------SIGGYEKNM- 260
+ + TI+D GG D DL+ +K IDL +S +GG N
Sbjct: 253 ITPAANRIFATIWDGGGIDTYDLSAYTTALK--IDLRAGGYSVFSQSQLADLGGGPNNGY 310
Query: 261 -------TIAQH----TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ H ++IE+V SGND ++GN A+N + ++GND G SG DT
Sbjct: 311 ARGNVFNALLYHDNVASLIENVRAGSGNDTLVGNEADNALWGNAGNDTLTGDSGNDTL 368
>gi|194337580|ref|YP_002019374.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310057|gb|ACF44757.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
Length = 1971
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 482 TFDSYLYLGSYDDLRN-------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+ +S+ Y SY DLR + +D AA HY H E R+ F A EY+AS+
Sbjct: 12 SLESWEYFASYGDLRGWALLDGVLNAADSTNAAWHYNMHASAENRSI-VFDAWEYLASNI 70
Query: 535 DLIN-----AFADAPDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSYDDLWNVFGSDR- 587
DL+N DA D ++A + + +N G EGRS+ TF+ YL + DL + G+
Sbjct: 71 DLMNWLGADGITDA-DAIKAAQHYITN-GAAEGRSMGTFDSAAYLAANADLRDWLGATNY 128
Query: 588 SAAAQHYITHGMKE 601
AAA+HYI G E
Sbjct: 129 DAAAKHYIQFGRAE 142
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 439 AFKALEYIASHEDL-----INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ ++ EY AS+ DL ++ +A D H++ E R + FD++ YL S
Sbjct: 12 SLESWEYFASYGDLRGWALLDGVLNAADSTNAAW-HYNMHASAENRSIVFDAWEYLASNI 70
Query: 494 DLRNVFGSDRGA------AARHYITHGVKEGRNPDAFKALEYIASHEDL 536
DL N G+D AA+HYIT+G EGR+ F + Y+A++ DL
Sbjct: 71 DLMNWLGADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAANADL 119
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 363 EYTASYEDLIQ-------VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
EY ASY DL + D + H+ +E R I FD++ YL S DL N
Sbjct: 17 EYFASYGDLRGWALLDGVLNAADSTNAAWHYNMHASAENRSIVFDAWEYLASNIDLMNWL 76
Query: 416 GSDRGA------AARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G+D AA+HYIT+G EGR+ F + Y+A++ DL
Sbjct: 77 GADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAANADL 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 523 AFKALEYIASHEDL-----INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
+ ++ EY AS+ DL ++ +A D A H++ E RSI F+ YL S
Sbjct: 12 SLESWEYFASYGDLRGWALLDGVLNAADSTNAAW-HYNMHASAENRSIVFDAWEYLASNI 70
Query: 578 DLWNVFGSDRSA------AAQHYITHGMKEGRALG 606
DL N G+D AAQHYIT+G EGR++G
Sbjct: 71 DLMNWLGADGITDADAIKAAQHYITNGAAEGRSMG 105
>gi|307152892|ref|YP_003888276.1| hypothetical protein Cyan7822_3046 [Cyanothece sp. PCC 7822]
gi|306983120|gb|ADN15001.1| hypothetical protein Cyan7822_3046 [Cyanothece sp. PCC 7822]
Length = 729
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 140/316 (44%), Gaps = 61/316 (19%)
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA- 421
TA Y + Q + H+Y+ G EGR + FD+ YL D+ ++ G
Sbjct: 134 TAYYLQQNPEVAQSGVNPLAHYYQNGAREGRKPNPLFDTSYYLEQNPDV-----AESGLN 188
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFGCEE 477
HY+ G +GR P+ F + Y+ + P++ Q G + H+ G +E
Sbjct: 189 PLVHYLQEGGYQGRKPNPLFNSGYYLQQN----------PEVAQSGVNPLVHYLECGAQE 238
Query: 478 GRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHE 534
GR FDS YL + V S A HY+ G +EGR P++ F + Y+A +
Sbjct: 239 GRKPNPLFDSGYYLQQNPE---VAHSGLNPLA-HYLECGAREGRKPNSLFDSAYYLAQN- 293
Query: 535 DLINAFADAPDLVQAGKD---HFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA 589
P++ Q+G + H+ G EGR F+ D YL D+ +G + A
Sbjct: 294 ---------PEVAQSGLNPLAHYLECGAREGRKPNPFFDGDYYLEQNPDVAE-WGDNPLA 343
Query: 590 AAQHYITHGMKEGR-ALGISGM-----QFKSVMNLSEK----SRDKADLSLSF-DHKKVD 638
HYI +G +GR A + + + SV++ ++K + ++A + S+ H KV
Sbjct: 344 ---HYIDYGAYQGRLAWSLPNVMRIIQEESSVLSQTQKLINQTPNRALIFSSYRSHPKVG 400
Query: 639 LYTDYFGDGNYYDSDL 654
+Y GNY+ +++
Sbjct: 401 IYCSSI--GNYFMAEM 414
>gi|83593942|ref|YP_427694.1| hypothetical protein Rru_A2610 [Rhodospirillum rubrum ATCC 11170]
gi|83576856|gb|ABC23407.1| hypothetical protein Rru_A2610 [Rhodospirillum rubrum ATCC 11170]
Length = 1313
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
+ FD+ YL +Y D+ + A+A+ H+ +G KE RNP + F A Y A + D++N
Sbjct: 3 LAFDTTSYLTTYPDVARAVSLGQFASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDVLN 62
Query: 455 AFADA--PDLVQVGKDHFSNFGCEEGR-----FVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
A + P + HF FG EGR TFD +YL + D+ + +A
Sbjct: 63 AVSSGVFPSVWA----HFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVANGTMPSA 118
Query: 508 R-HYITHGVKEGRNPDAFKALEYIA-------SHEDLINAFADAP 544
HY+ G+ EGR P + A S D+I A AP
Sbjct: 119 LFHYVAFGMDEGR-PSGQTFILTTAQDPFTGTSGADVIRGVAGAP 162
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD+ YL +Y D+ + A+A+ H+ +G KE RNP + F A Y A + D++NA
Sbjct: 5 FDTTSYLTTYPDVARAVSLGQFASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDVLNAV 64
Query: 541 ADA--PDLVQAGKDHFSNFGYEEGRS-----ITFNPDLYLTSYDDLWNVFGSDRSAAAQ- 592
+ P + HF FG EGR+ TF+ +YL + D+ + +A
Sbjct: 65 SSGVFPSVWA----HFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVANGTMPSALF 120
Query: 593 HYITHGMKEGRALG 606
HY+ GM EGR G
Sbjct: 121 HYVAFGMDEGRPSG 134
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 364 YTASYEDLIQVIGQDVFESM-KHFYEFGLSEGRD-----ITFDSYLYLGSYDDLRNVFGS 417
Y A D++ + VF S+ HF FG++EGR TFD +YL + D+ +
Sbjct: 53 YAAQNPDVLNAVSSGVFPSVWAHFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVAN 112
Query: 418 DRGAAAR-HYITHGVKEGRNPDAFKALEYIA-------SHEDLINAFADAP 460
+A HY+ G+ EGR P + A S D+I A AP
Sbjct: 113 GTMPSALFHYVAFGMDEGR-PSGQTFILTTAQDPFTGTSGADVIRGVAGAP 162
>gi|158424290|ref|YP_001525582.1| zinc-dependent metalloprotease [Azorhizobium caulinodans ORS 571]
gi|158331179|dbj|BAF88664.1| zinc-dependent metalloprotease [Azorhizobium caulinodans ORS 571]
Length = 709
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 142/376 (37%), Gaps = 105/376 (27%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELN------PNAQEVA-------------RWA 58
L D W+ F +P + T+ + + P+ QE+A R A
Sbjct: 48 LMDYRWTTSFNGSQPATVMTYAFPTSAADYSSIAGGYPDTQELAQFAPLTQTQMDAVRTA 107
Query: 59 LGEWSKVVDLTFEE----------------TSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
LG + +L F E T S+ +F +++ Y + DSR
Sbjct: 108 LGLVASYTNLVFREVTSGLASEATLRFAQFTDTGSESRFPANSGPYASS---DSRV---- 160
Query: 103 NFDKADVWRYGIGK------GTILSHNALHEIGHALGLMHP--GSYNGGYPVYGVDNDYE 154
D W G G+ GT + +HE+GHA GL H GS+NG DN++
Sbjct: 161 ---AGDTWLGGNGQAPAAYFGTDALNTIMHEMGHAFGLKHGHDGSFNGALAPQFNDNEF- 216
Query: 155 NDSFLTSVMSY--FMPQDSMMDASFGYCATP---MVSDIVAVQKIYGAPKGSLGN-NIYK 208
SVMSY + ++ ++P M+ DI A+Q++YGA +G ++YK
Sbjct: 217 ------SVMSYASYFGANTAGSTEAIAGSSPQSYMMFDIAALQELYGANFSKVGTTDVYK 270
Query: 209 IE-------VQQKDSP---------FIQTIYDSGGDDLLDLT---------------LIG 237
+ + +P T++ +G DL+ L
Sbjct: 271 WDPVTGQETINGVPAPNTGASSTGKIFSTVWTAGATVTYDLSAFNEDQVDDLRPGQWLTF 330
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTI--------AQHTVIESVVGSSGNDVVIGNSANNVF 289
DLN E+ + Y+ I +++ +++ +G+D + GN NNV
Sbjct: 331 SKAQIADLNNEAVAGTAQYQAQGNIYNALLYHGDARSLVSNIITGNGSDKITGNDGNNVI 390
Query: 290 FESSGNDVFDGSSGLD 305
+GND G +G D
Sbjct: 391 SAGAGNDWISGGNGND 406
>gi|126734587|ref|ZP_01750333.1| hypothetical protein RCCS2_11959 [Roseobacter sp. CCS2]
gi|126715142|gb|EBA12007.1| hypothetical protein RCCS2_11959 [Roseobacter sp. CCS2]
Length = 421
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 122/330 (36%), Gaps = 87/330 (26%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFM----------- 100
+ A W+ + ++TF+ S +DI+ S + P + FM
Sbjct: 69 ESAIELAFATWAALANITFQAVSGAADIEIRSDSVDGNGGPDGNVLGFMRPTDFETIFVG 128
Query: 101 ---------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVD 150
EI FD+A+ W G GT ALHEIGHALG+ H P +GG
Sbjct: 129 DEFAIFDDVEIVFDRAENWAVDGGSGTSFFAVALHEIGHALGMDHVPNVSDGGT------ 182
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
+N M+ + D + DI + +YG + S G + +
Sbjct: 183 --LQN-------MNPILSTDELQSG-----------DIAGIGTLYGDREYSDG--VDNVS 220
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLT--------------LIGGVKNYIDLNTESWSSIGGY 256
+ + Q I+ GG+D + T L GG N ++T + I G
Sbjct: 221 FAKVNVDTGQVIFSKGGNDNVTGTDFGDSIYGGAGNDHLFGGGGNDRLVDTRGDNDIEGG 280
Query: 257 EKNMTI-------------AQHTVI-----ESVVGSSGNDVVIGN------SANNVFFES 292
TI T+I +++ G SGND + G+ + N+
Sbjct: 281 NGGDTIIGGAGAIDADGNNGNDTLIGGIGNDTLNGGSGNDTLRGDPSGSFIAGNDTLIAG 340
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
SGND +G G DTF + S +I FE
Sbjct: 341 SGNDELEGGGGADTFVFSRASGNNRILDFE 370
>gi|329848980|ref|ZP_08264008.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844043|gb|EGF93612.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1863
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 141/362 (38%), Gaps = 108/362 (29%)
Query: 30 YKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF----EETSIHSDIKFISSN 85
Y LT H + N Q R+ALG L+F E + H++++F +
Sbjct: 171 YDSGYLTNHVV------FNAAQQTATRYALGLIYGYTLLSFTEVTESNTTHANLRFSQTT 224
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGI------------------GKGTILSHNALHE 127
+ + + E NF +D W + G+ TI+ HE
Sbjct: 225 DSSLGSA--------EGNFPGSDSWDGDVWFGQTGQPYYLTPQIGNWGQATIM-----HE 271
Query: 128 IGHALGLMH-----------PGSY-NGGYPVYGVDN-DYENDSFLTSVMSYFMPQDSMMD 174
IGHALGL H PG Y +G P YG D +DS+ S+M+Y D
Sbjct: 272 IGHALGLKHGHSDYTGFDLAPGGYVDGPGPRYGSAALDAAHDSWAYSLMTYRSASGYASD 331
Query: 175 ---ASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KDSPFI-- 219
F T M +DI A+Q +YGA G + GN Y V + +P +
Sbjct: 332 FQGDQFNQPQTYMQNDIAALQYLYGAWFGFNSGNTTYSFNVTTGELFVNGVGQGTPTLNG 391
Query: 220 ------QTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSI------------GGY 256
+TI+D G D D + N+ I+L +WS++ GG
Sbjct: 392 GQGKIFRTIWDGNGIDTYDFS------NFTDNQSINLAPGAWSTMSAARLVDLRPLDGGV 445
Query: 257 E----KNMTIAQ------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
N+ A ++IE+ G SGND + GN A N + G+D GS+G DT
Sbjct: 446 NVAPPGNLANALLYNGDLRSLIENANGGSGNDSIYGNQAGNTLQGNGGDDYGFGSTGNDT 505
Query: 307 FF 308
+
Sbjct: 506 LY 507
>gi|307152358|ref|YP_003887742.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306982586|gb|ADN14467.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 880
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 88/209 (42%), Gaps = 50/209 (23%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HEIGHALGL HP + P + D+ +VM+Y +S T M
Sbjct: 243 VHEIGHALGLKHPFDDSPNLPP-------QEDNTTNTVMTYNFTGNS--------AGTYM 287
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQ------------QKDSPFIQTIYDSGGDDLLD 232
DI A+Q +YGA + + IYK + Q I+DSGG D LD
Sbjct: 288 GFDIKALQYMYGAKAYNTTDTIYKFTTKVDQFSVGGQLSLNTSYSTKQLIWDSGGKDTLD 347
Query: 233 L-TLIGGVKNY-IDLN------TESWSSIGGYEKN----------MTIAQHTVIESVVGS 274
+L Y DLN T+S + Y N IA + +IE+++ S
Sbjct: 348 FFSLAANSTGYRFDLNPGGILTTQSAYNGTSYTVNGTTYKTTTFGTEIAYNVLIENLINS 407
Query: 275 SGNDVVIGNSANNVF-----FESSGNDVF 298
S ND V NSA N F +GNDV+
Sbjct: 408 SSNDEVFANSAANTFAGYSSTRKTGNDVY 436
>gi|163794636|ref|ZP_02188606.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
gi|159179909|gb|EDP64434.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
Length = 485
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 130/320 (40%), Gaps = 75/320 (23%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIHSD---IKFISSNNGYVCTPRYDSRYFMEI 102
E N + AR AL EWS ++TF E S D ++F S + Y+
Sbjct: 90 EFNDTMKSAARLALAEWSSAANITFVEVSDAGDGGTLRFGSE----AMSDYAGYAYYPST 145
Query: 103 NFDKADVW---RYGIGKGTILSHNA----LHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ D+W + ++ + +HEIGHA+GL HPG+Y
Sbjct: 146 SAIGGDIWISNSFSYNTAPVVGNYGYLTYMHEIGHAIGLKHPGNYG-----------SST 194
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVS---DIVAVQKIYG-APKGSLGNNIYKIEV 211
FL+S S +++M + G P DI+A + +YG + G++GN + +
Sbjct: 195 GPFLSS--SADNTDNTVMSYTTGSAVYPTSLGSYDILAARYLYGYSGTGTIGNVTFGSDA 252
Query: 212 QQK---DSPFIQTIYDSGGDDLLDL--------------TLIGGVKN---YIDLNTESWS 251
+ DS IQ ++ G D + + T++GG + Y ++ ++ S
Sbjct: 253 AETFTGDSG-IQYVHGRDGADYIAVLGGNDGVAAGSGSDTVLGGDGSDLIYGNIGSDLLS 311
Query: 252 SIGGYE--------------KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + + + + IE+V G SGNDV+ GN N++ +GND+
Sbjct: 312 GGSGNDTIFGGQNDGPESSGSDGVLKYRSGIETVDGGSGNDVLYGNYGNDLILGGTGNDL 371
Query: 298 F---------DGSSGLDTFF 308
G SG DT +
Sbjct: 372 IYAGQDEDTASGGSGNDTIY 391
>gi|124026282|ref|YP_001015398.1| hypothetical protein NATL1_15761 [Prochlorococcus marinus str.
NATL1A]
gi|123961350|gb|ABM76133.1| Hypothetical protein NATL1_15761 [Prochlorococcus marinus str.
NATL1A]
Length = 580
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
GSS ND + G+S+N FF S G+D+ +G G DT Y Y R +N++ + D
Sbjct: 302 TGSSSNDELTGSSSNETFFASEGSDIINGKGGNDTSIYSGKFSDYSFTREDNSLAIADQR 361
Query: 332 EHKQ---DFLSDVERLRFADQCIDSVNV 356
K D LS++E ++F+DQ ++ V
Sbjct: 362 TGKNNGTDTLSNIEYIQFSDQKVEESKV 389
>gi|302337198|ref|YP_003802404.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
gi|301634383|gb|ADK79810.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
Length = 1808
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 24/163 (14%)
Query: 379 VFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
V ++HF G +GR+ FD+ Y +Y D++ G + HYI +G KEGRN
Sbjct: 713 VANPIRHFLMTGFKKGRNPHPLFDTKYYYETYPDIKRA-GLN---PVLHYIRYGAKEGRN 768
Query: 437 PDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYD 493
P F YI ++ D + + P + H+ N G +E R FD+ YL +Y
Sbjct: 769 PHPLFDTKFYIGNYPD-VKSNGVNPLM------HYLNLGWKERRNPNPNFDTDYYLTTYS 821
Query: 494 DLR--NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
D+R NV HYI +G+KE RN + + I S++
Sbjct: 822 DIRIKNV------NPLSHYILYGIKENRNTHLIGSKDSITSNK 858
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 469 HFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 525
HF G ++GR FD+ Y +Y D++ G + HYI +G KEGRNP F
Sbjct: 719 HFLMTGFKKGRNPHPLFDTKYYYETYPDIKRA-GLN---PVLHYIRYGAKEGRNPHPLFD 774
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKD---HFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
YI ++ PD+ G + H+ N G++E R+ F+ D YLT+Y D+
Sbjct: 775 TKFYIGNY----------PDVKSNGVNPLMHYLNLGWKERRNPNPNFDTDYYLTTYSDI- 823
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISG 609
HYI +G+KE R + G
Sbjct: 824 ---RIKNVNPLSHYILYGIKENRNTHLIG 849
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 40/210 (19%)
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR--NVFGSDRGAAARHYITHGVKEGRN-- 436
+ H+ G E R+ FD+ YL +Y D+R NV HYI +G+KE RN
Sbjct: 793 LMHYLNLGWKERRNPNPNFDTDYYLTTYSDIRIKNV------NPLSHYILYGIKENRNTH 846
Query: 437 ----PDAFKALEYIASHED--LINA----FADAPDLVQVGKDHFS--NFGCEEGRFVT-- 482
D+ + + I+ ++D L+N + D + + +++ N E+ T
Sbjct: 847 LIGSKDSITSNKVISRNKDKELLNKNDFLYGDGLKQIYLKIENYKKENMSIEKIAIQTGL 906
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
F+ Y+ N G + +HY+ G G NP + F +Y+ ++ D+ +A
Sbjct: 907 FNEKYYIN------NAKGINIKEPFKHYLERGYLLGLNPSSIFNTSQYLDANRDVY--WA 958
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
+ L HF +GY E R + D+
Sbjct: 959 NMNPLF-----HFIKYGYSENRKMVHPGDI 983
>gi|303288219|ref|XP_003063398.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455230|gb|EEH52534.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 895
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 82/213 (38%), Gaps = 44/213 (20%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
N+H +D L E+L A+ + ++ D +Q Q V E + H E
Sbjct: 151 NKHLEDIL---EKLTAAENKLSEKLTANTNLGGKIHDRTDFVQKALQKV-EKLHHALEGS 206
Query: 391 LSE-GRDITFD-SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
L+ +DI+ D + YL Y DL FG + AA H++ HG E R D +Y+ +
Sbjct: 207 LANIDKDISDDQAKCYLHRYRDLSRAFGHNIAAAKNHWVDHGRHEHRTLD----CDYMTT 262
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
E + Y+ Y DL FG + GAA R
Sbjct: 263 EE----------------------------------AKCYVNRYSDLLRAFGHNIGAAKR 288
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
H+ HG KEGR+ + + +S FA
Sbjct: 289 HWNKHGKKEGRDKECASHQQVKSSKAKFTKKFA 321
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 327 VYDANEHKQDFLSDVERLRFADQC----IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++D + Q L VE+L A + ID ++ Y Y DL + G ++ +
Sbjct: 182 IHDRTDFVQKALQKVEKLHHALEGSLANIDK-DISDDQAKCYLHRYRDLSRAFGHNIAAA 240
Query: 383 MKHFYEFGLSEGRDI------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
H+ + G E R + T ++ Y+ Y DL FG + GAA RH+ HG KEGR+
Sbjct: 241 KNHWVDHGRHEHRTLDCDYMTTEEAKCYVNRYSDLLRAFGHNIGAAKRHWNKHGKKEGRD 300
Query: 437 PDAFKALEYIASHEDLINAFA 457
+ + +S FA
Sbjct: 301 KECASHQQVKSSKAKFTKKFA 321
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI------TFNPDLYLTSYDDLWNV 582
Y+ + DL AF + A K+H+ + G E R++ T Y+ Y DL
Sbjct: 222 YLHRYRDLSRAFGHN---IAAAKNHWVDHGRHEHRTLDCDYMTTEEAKCYVNRYSDLLRA 278
Query: 583 FGSDRSAAAQHYITHGMKEGR 603
FG + AA +H+ HG KEGR
Sbjct: 279 FGHNIGAAKRHWNKHGKKEGR 299
>gi|148242008|ref|YP_001227165.1| hypothetical protein SynRCC307_0909 [Synechococcus sp. RCC307]
gi|147850318|emb|CAK27812.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 691
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 85/208 (40%), Gaps = 54/208 (25%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HEIGH LGL HP P ND + +VMSY + A++ T
Sbjct: 247 VHEIGHVLGLSHPQER----PYSKKWNDRD------TVMSY-----NKGGATWNSWFTH- 290
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------------- 231
SDI A+Q+I+G N +K ++ Q ++ G+D L
Sbjct: 291 -SDIKALQRIWGKE------NDHKDQLHQGKINIANKLFGENGNDKLFGGKKSDTLSGGM 343
Query: 232 -----------DLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDV 279
D + G N I+LNT W + G G ++ ++I E+V GNDV
Sbjct: 344 GNDIINGGSGRDTAVFSGRSNRINLNTTKWQNTGDGRDRLISI------ENVNVGGGNDV 397
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTF 307
V GN A N +GND G G DT
Sbjct: 398 VTGNKAANTLNGQNGNDSLYGQLGNDTI 425
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D + G+KN I+LNT W + G G ++ ++I E+V GNDVV GN A N
Sbjct: 432 DTAVFSGLKNRINLNTTRWQNTGDGRDRLISI------ENVNAGGGNDVVTGNKAANTLN 485
Query: 291 ESSGNDVFDGSSGLDTFF 308
+GNDV G++G D
Sbjct: 486 GQNGNDVLYGAAGNDRLL 503
>gi|17227860|ref|NP_484408.1| hypothetical protein all0364 [Nostoc sp. PCC 7120]
gi|17129709|dbj|BAB72322.1| all0364 [Nostoc sp. PCC 7120]
Length = 900
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ DS G D ++ I +Y++LN S S + G +TI+ T IE+ G GND +
Sbjct: 502 TLTDSSGTDTINAAAIT-ADSYLNLNPGSTSILNGTV--LTISTGTTIENAFGGDGNDTI 558
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IGNSA NV GND DG G DT + Y I I+ +ANE S
Sbjct: 559 IGNSAANVLHGGRGNDTLDGGVGNDTLRGGRGNDTY-IVNSTGDIVTENANEGIDTVQSS 617
Query: 341 V 341
V
Sbjct: 618 V 618
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++G +N+T+ + I G+ N+V+ GNS NN GND +GS+G+DT
Sbjct: 720 TLGNSLENLTLTGTSAINGT-GNRLNNVITGNSGNNTLNGGDGNDTLNGSAGVDTLL 775
>gi|258546038|ref|ZP_05706272.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258518695|gb|EEV87554.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 1549
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 88/211 (41%), Gaps = 34/211 (16%)
Query: 124 ALHEIGHALGLMHP---GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
ALHEIGH LGL HP G P V EN + SVMSY + + A Y
Sbjct: 1230 ALHEIGHTLGLTHPFDHAKKGDGRPDLSV---AENRDTI-SVMSYVNGETIPLRAGSNYY 1285
Query: 181 AT-PMVS------DIVAVQKIYGA-PKGSLGNNIYKIEVQQKDSPFIQT-IYDSGGDDLL 231
P+ D+ A+ +G P G++ Y + KD+ I+D GG D
Sbjct: 1286 PEFPIAQNKLGIFDLAALHHSFGVNPNYHSGDDTYTFKEFNKDAVGNDIYIHDGGGLDTF 1345
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEK---------------NMTIAQHTVIESVVGSSG 276
D + N IDL SW G EK M I T IE+ G +G
Sbjct: 1346 DASEQTLDLN-IDLTPGSWIYAG--EKTAHLALNDDLTPTHGQMFIGYGTQIENAKGGTG 1402
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
ND + GNSA+N F G+D DG +G D
Sbjct: 1403 NDTIKGNSADNHLFGFDGDDHLDGGAGNDQL 1433
>gi|332295249|ref|YP_004437172.1| glycosyl transferase family 2 [Thermodesulfobium narugense DSM
14796]
gi|332178352|gb|AEE14041.1| glycosyl transferase family 2 [Thermodesulfobium narugense DSM
14796]
Length = 867
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 24/127 (18%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL SY D+R +D HYI G KE RNP+ F+ Y+ +
Sbjct: 23 FDEIYYLKSYPDVR---AADIDPI-EHYILFGAKERRNPNIYFQTGFYLDKY-------- 70
Query: 458 DAPDLVQVGKD---HFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
PD+VQ G + H+ FG +EGR+ FDS YL + D++ R HYI
Sbjct: 71 --PDMVQSGINPLLHYILFGAKEGRWPNPEFDSEYYLLANPDVKKA----RLNPLLHYIL 124
Query: 513 HGVKEGR 519
G KEGR
Sbjct: 125 FGQKEGR 131
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 24/127 (18%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL SY D+R +D HYI G KE RNP+ F+ Y+ +
Sbjct: 23 FDEIYYLKSYPDVR---AADIDPI-EHYILFGAKERRNPNIYFQTGFYLDKY-------- 70
Query: 542 DAPDLVQAGKD---HFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
PD+VQ+G + H+ FG +EGR + F+ + YL + D+ R HYI
Sbjct: 71 --PDMVQSGINPLLHYILFGAKEGRWPNPEFDSEYYLLANPDV----KKARLNPLLHYIL 124
Query: 597 HGMKEGR 603
G KEGR
Sbjct: 125 FGQKEGR 131
>gi|119489829|ref|ZP_01622584.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119454257|gb|EAW35408.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 299
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y + Y D+ I ++ +HF FG E R+ FD+ YL Y D+ F +++
Sbjct: 56 YRSIYTDVSAAIEREAITEAEHFILFGQFEQRNPNPLFDTAYYLEQYPDVETAFQAEQLT 115
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
H+ G EGRNP F AL Y + ++I A D +V +HF FG + G+
Sbjct: 116 PFEHFFRFGQFEGRNPSLFFDALFYQERNPEVITAIEDG--VVNSLFEHFIRFGLKRGKL 173
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 86/237 (36%), Gaps = 55/237 (23%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEG--RDITFDSYLYLGSYDDLRNVFGSDRG 420
Y Y + + + FES + HF + G E + FD Y Y D+ +
Sbjct: 13 YLDQYPAVSEAVDAGEFESGLDHFLQVGQFESLQPNPLFDPAYYRSIYTDVSAAIEREAI 72
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A H+I G E RNP+
Sbjct: 73 TEAEHFILFGQFEQRNPNPL---------------------------------------- 92
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD+ YL Y D+ F +++ H+ G EGRNP F AL Y + ++I A
Sbjct: 93 --FDTAYYLEQYPDVETAFQAEQLTPFEHFFRFGQFEGRNPSLFFDALFYQERNPEVITA 150
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR-SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
D +V + +HF FG + G+ ++ P+ +DL VF D ++ I
Sbjct: 151 IEDG--VVNSLFEHFIRFGLKRGKLGVSPEPE------NDLSGVFQLDTLLGSRTVI 199
>gi|195027856|ref|XP_001986798.1| GH21566 [Drosophila grimshawi]
gi|193902798|gb|EDW01665.1| GH21566 [Drosophila grimshawi]
Length = 587
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+AR A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 143 EIAR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 201
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 202 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 261
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + S + + + T + Y PK L ++I K
Sbjct: 262 DK-----AAIQSLYGRKTSQLTPTNAFPPT-------THRPSYTPPKVPLDDSICKDSKI 309
Query: 213 QK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+SP +T Y GD LT Y L ++ W + G
Sbjct: 310 DTLFNSPTGET-YAFKGDKYYKLTTDSVEDGYPKLISKGWPGLPG 353
>gi|58038685|ref|YP_190649.1| hypothetical protein GOX0204 [Gluconobacter oxydans 621H]
gi|58001099|gb|AAW59993.1| Hypothetical protein GOX0204 [Gluconobacter oxydans 621H]
Length = 1260
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 79/207 (38%), Gaps = 67/207 (32%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
FD++ YL S DL + G+ A RHY HG +EGR P+ F
Sbjct: 34 FDAFYYLKSNPDL-HTLGT---AVLRHYHQHGWREGRKPNPF------------------ 71
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
FD + YL R+V G HYI HG +EG
Sbjct: 72 ------------------------FDPHWYLSKN---RDVIGD----PLLHYILHGEREG 100
Query: 519 RNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSY 576
R P A F + Y ++ P+ + A + N R I F+PD YL +Y
Sbjct: 101 RRPIAWFDPVWYARTYH--------VPERMLALAHYLKNRHNTPLRPIPEFDPDFYLRAY 152
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ G D A +HY+ G +E R
Sbjct: 153 PDVAKA-GLD---ALEHYMVQGFREAR 175
>gi|209524097|ref|ZP_03272648.1| Periplasmic protein TonB links inner and outer membranes-like
protein [Arthrospira maxima CS-328]
gi|209495472|gb|EDZ95776.1| Periplasmic protein TonB links inner and outer membranes-like
protein [Arthrospira maxima CS-328]
Length = 2523
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 380 FESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN- 436
F + +HF EFG EGR+ + F YL DL V +R A H++ G+ E R
Sbjct: 94 FNAREHFREFGKFEGREFSAFFSVTRYLEKNTDLSLVI--NREEAFSHFLDFGLNEAREF 151
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
D F A Y ++ DL A + + HF FG E R + FD+ YL D
Sbjct: 152 SDFFSASFYAEANPDLA---AITQETLVSKFAHFLGFGQFENRRFSRVFDANTYLQLNPD 208
Query: 495 LRNVFGSDRG-----AAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQ 548
+ + +A H+IT G E R + F EY+ + DL+ F ++ ++
Sbjct: 209 VSQLLQESANLGIQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLV-PFVESGEI-- 265
Query: 549 AGKDHFSNFGYEEGRSITFN 568
DH+ FG E R + +
Sbjct: 266 NAIDHWVRFGISERREFSLS 285
>gi|193076786|gb|ABO11503.2| Hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
17978]
Length = 3298
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 40/196 (20%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
LHEI HALGL HP PV ++N+ N ++MSY S G T
Sbjct: 1456 LHEISHALGLKHPFEA----PVLPELENNQNN-----TLMSY---------TSNGVNDTN 1497
Query: 184 M-VSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-LTLIGGVK 240
+ + D+ ++Q ++G + +GN+ Y + I+D G D + TL V
Sbjct: 1498 LKLYDLASLQYLHGVNQNVHVGNDTYTFADKY--------IWDGNGIDTFNAFTLTQNV- 1548
Query: 241 NYIDLNTESWSSIGGYEKNMT------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
YIDLN WS IG +++ I TVIE+ +G G+D +I N+ANN+ +G
Sbjct: 1549 -YIDLNAGGWSYIGQKSQSILDEGQTFIGYGTVIENAIGGIGDDTLISNAANNLLQGGAG 1607
Query: 295 ND--VFDGSSGLDTFF 308
D +F+G+ G D
Sbjct: 1608 KDTYIFNGNFGHDQII 1623
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+N+T+ + I+++ G+SGND + G + N+V + SGND +G +G DT +
Sbjct: 2954 QNLTVNGTSSIDTLYGASGNDTITGLAGNDVLYGQSGNDTLNGGTGNDTMY 3004
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 219 IQTIYDSGGDDLLDL-----TLIGGVKN---YIDLNTESWS----------------SIG 254
I T+ D GDD LD L+GG+ N +D T++ + ++G
Sbjct: 3072 INTLTDGAGDDYLDGGAGNDKLLGGLGNDVYVVDSTTDTITENTNEGIDTVRSSVTYTLG 3131
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+N+T+ T I + G++ N+ +IGN+ N+ +GND+ DG G D F
Sbjct: 3132 NNLENLTLTGTTAINAT-GNALNNTLIGNNEVNILNGGAGNDILDGQGGNDQF 3183
>gi|218440126|ref|YP_002378455.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7424]
gi|218172854|gb|ACK71587.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7424]
Length = 768
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 95/221 (42%), Gaps = 56/221 (25%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM---PQDSMMDASFGYCA 181
+HEIGHALGL HP + G + + DN+ N +VM+Y P + M GY
Sbjct: 232 IHEIGHALGLKHP--HEGSFTLAPQDNNTTN-----TVMTYNFTGKPAGTFM----GY-- 278
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQ---KDSPFIQT-------IYDSGGDD 229
D+ A+Q +YGA + + IY+ V Q D F+ T I+DSGG D
Sbjct: 279 -----DVNALQSLYGAKDYNSTDTIYQFTTRVDQFYVNDQLFLNTPNQTKQLIWDSGGKD 333
Query: 230 LLDLTLIGGVKN--YIDLN----------------TESWSSIGGYEKNMTIAQHTVIESV 271
LD + + + DLN T + + I + VIE +
Sbjct: 334 TLDFSQLSANSSGYRFDLNEGNILTAKNAYNGTSYTVNGVTYYTTTYGTAIGYYVVIEDL 393
Query: 272 VGSSGNDVVIGNSANNVF-----FESSGNDVFDGSSGLDTF 307
+ SS ND + N+A N F +GND++ +S DT
Sbjct: 394 INSSSNDEIFANNAANRFKGYSPTLKTGNDIYWNTSNNDTL 434
>gi|126641121|ref|YP_001084105.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
17978]
Length = 3216
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 40/196 (20%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
LHEI HALGL HP PV ++N+ N ++MSY S G T
Sbjct: 1374 LHEISHALGLKHPFEA----PVLPELENNQNN-----TLMSY---------TSNGVNDTN 1415
Query: 184 M-VSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-LTLIGGVK 240
+ + D+ ++Q ++G + +GN+ Y + I+D G D + TL V
Sbjct: 1416 LKLYDLASLQYLHGVNQNVHVGNDTYTFADKY--------IWDGNGIDTFNAFTLTQNV- 1466
Query: 241 NYIDLNTESWSSIGGYEKNMT------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
YIDLN WS IG +++ I TVIE+ +G G+D +I N+ANN+ +G
Sbjct: 1467 -YIDLNAGGWSYIGQKSQSILDEGQTFIGYGTVIENAIGGIGDDTLISNAANNLLQGGAG 1525
Query: 295 ND--VFDGSSGLDTFF 308
D +F+G+ G D
Sbjct: 1526 KDTYIFNGNFGHDQII 1541
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+N+T+ + I+++ G+SGND + G + N+V + SGND +G +G DT +
Sbjct: 2872 QNLTVNGTSSIDTLYGASGNDTITGLAGNDVLYGQSGNDTLNGGTGNDTMY 2922
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 219 IQTIYDSGGDDLLDL-----TLIGGVKN---YIDLNTESWS----------------SIG 254
I T+ D GDD LD L+GG+ N +D T++ + ++G
Sbjct: 2990 INTLTDGAGDDYLDGGAGNDKLLGGLGNDVYVVDSTTDTITENTNEGIDTVRSSVTYTLG 3049
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+N+T+ T I + G++ N+ +IGN+ N+ +GND+ DG G D F
Sbjct: 3050 NNLENLTLTGTTAINAT-GNALNNTLIGNNEVNILNGGAGNDILDGQGGNDQF 3101
>gi|317047360|ref|YP_004115008.1| family 2 glycosyl transferase [Pantoea sp. At-9b]
gi|316948977|gb|ADU68452.1| glycosyl transferase family 2 [Pantoea sp. At-9b]
Length = 1419
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 26/130 (20%)
Query: 460 PDLVQVG---KDHFSNFGCEEGRFVT-----------FDSYLYLGSYDDLRNVFGSDRGA 505
PD+ G ++H+ N+G EGR+ T FD+ YL +Y D+ +
Sbjct: 442 PDVSGSGVEPEEHYLNYGKAEGRYPTQNAFLQSEAPDFDAQWYLDTYTDV----ARAQIP 497
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA-PDLVQAGKDHFSNF---GYEE 561
A HYITHG +EGR F +L + + + I + +A PD+ +G D F +F G+ E
Sbjct: 498 AVYHYITHGQQEGR----FSSLARLVAQDLDIPWYLEAYPDVATSGMDPFEHFLLYGHAE 553
Query: 562 GRSITFNPDL 571
GR + P +
Sbjct: 554 GRQPSATPRM 563
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 27/131 (20%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----------FDSYLYLGSYDDLR 412
Y +Y D V G V E +H+ +G +EGR T FD+ YL +Y D+
Sbjct: 437 YLQTYPD---VSGSGV-EPEEHYLNYGKAEGRYPTQNAFLQSEAPDFDAQWYLDTYTDV- 491
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA-PDLVQVGKDHFS 471
+ A HYITHG +EGR F +L + + + I + +A PD+ G D F
Sbjct: 492 ---ARAQIPAVYHYITHGQQEGR----FSSLARLVAQDLDIPWYLEAYPDVATSGMDPFE 544
Query: 472 NF---GCEEGR 479
+F G EGR
Sbjct: 545 HFLLYGHAEGR 555
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 544 PDLVQAG---KDHFSNFGYEEGRSITFN-------PDLYLTSYDDLWNVFGSDRSAAAQH 593
PD+ +G ++H+ N+G EGR T N PD Y D + + A H
Sbjct: 442 PDVSGSGVEPEEHYLNYGKAEGRYPTQNAFLQSEAPDFDAQWYLDTYTDVARAQIPAVYH 501
Query: 594 YITHGMKEGR 603
YITHG +EGR
Sbjct: 502 YITHGQQEGR 511
>gi|291518071|emb|CBK73292.1| hypothetical protein CIY_03380 [Butyrivibrio fibrisolvens 16/4]
Length = 312
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D++ +G D + H+ G+ EGRD TF+ +Y + DL FGS+ A
Sbjct: 57 YAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVTAFGSNYQA 116
Query: 422 AARHYITHGVKEGR--NPDAF-----KALEYIASHEDLINAFAD 458
HY+T G+KE R + DA KA+ +A D I + ++
Sbjct: 117 FINHYVTSGIKENRVASADALLKQGPKAIATLAQQNDQIKSTSN 160
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F A Y ++ D++ A + P ++ +H+ N G EGR S TFN +Y + DL
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVL---LNHYVNNGIYEGRDASATFNMSVYALANPDLVT 108
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
FGS+ A HY+T G+KE R
Sbjct: 109 AFGSNYQAFINHYVTSGIKENR 130
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRN 497
F A Y ++ D++ A + P ++ +H+ N G EGR TF+ +Y + DL
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVL---LNHYVNNGIYEGRDASATFNMSVYALANPDLVT 108
Query: 498 VFGSDRGAAARHYITHGVKEGR--NPDAF-----KALEYIASHEDLINAFAD 542
FGS+ A HY+T G+KE R + DA KA+ +A D I + ++
Sbjct: 109 AFGSNYQAFINHYVTSGIKENRVASADALLKQGPKAIATLAQQNDQIKSTSN 160
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y +Y D+ G+D HY+ +G+ EGR+ A F Y ++ DL+ AF
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVTAFG 111
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
Q +H+ G +E R + D+ L G
Sbjct: 112 SN---YQAFINHYVTSGIKENRVASADALLKQG 141
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y +Y D+ G+D HY+ +G+ EGR+ A F Y ++ DL+ AF
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVTAFG 111
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
QA +H+ G +E R
Sbjct: 112 SN---YQAFINHYVTSGIKENR 130
>gi|254503057|ref|ZP_05115208.1| Cadherin domain protein [Labrenzia alexandrii DFL-11]
gi|222439128|gb|EEE45807.1| Cadherin domain protein [Labrenzia alexandrii DFL-11]
Length = 703
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRG---AAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
+FDS YL D+ + G +A +H+ G EGR+P+ F Y+ +
Sbjct: 8 SFDSDFYLSQNPDVAAAI--EAGLFESAEQHFNQFGFSEGRDPNPYFDTSFYLEQN---- 61
Query: 454 NAFADAPDLVQVG---KDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
PD+ G +HF+ FG EGR F+ YL D+ + +
Sbjct: 62 ------PDVAAAGINPLNHFNQFGETEGRSPNAIFNPTYYLEQNPDVA----ASGISPFL 111
Query: 509 HYITHGVKEGRNPDA---------FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
H+I HG EGR+P+A F Y+A++ D+ +A A+ +G +H+ FG+
Sbjct: 112 HFINHGASEGRSPNASVASQTSEGFDEAAYLAANPDIADAIANG--TFSSGYEHWLLFGF 169
Query: 560 EEGRS 564
+E RS
Sbjct: 170 DESRS 174
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 48/162 (29%)
Query: 364 YTASYEDLIQVIGQDVFESM-KHFYEFGLSEGRDIT--FDSYLYLGSYDDLR-------- 412
Y + D+ I +FES +HF +FG SEGRD FD+ YL D+
Sbjct: 14 YLSQNPDVAAAIEAGLFESAEQHFNQFGFSEGRDPNPYFDTSFYLEQNPDVAAAGINPLN 73
Query: 413 --NVFGSDRGAAAR------------------------HYITHGVKEGRNPDA------- 439
N FG G + H+I HG EGR+P+A
Sbjct: 74 HFNQFGETEGRSPNAIFNPTYYLEQNPDVAASGISPFLHFINHGASEGRSPNASVASQTS 133
Query: 440 --FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
F Y+A++ D+ +A A+ G +H+ FG +E R
Sbjct: 134 EGFDEAAYLAANPDIADAIANG--TFSSGYEHWLLFGFDESR 173
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 25/132 (18%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRG---AAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
+FDS YL D+ + G +A +H+ G EGR+P+ F Y+ +
Sbjct: 8 SFDSDFYLSQNPDVAAAI--EAGLFESAEQHFNQFGFSEGRDPNPYFDTSFYLEQN---- 61
Query: 538 NAFADAPDLVQAG---KDHFSNFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
PD+ AG +HF+ FG EGRS FNP YL D+ + +
Sbjct: 62 ------PDVAAAGINPLNHFNQFGETEGRSPNAIFNPTYYLEQNPDVA----ASGISPFL 111
Query: 593 HYITHGMKEGRA 604
H+I HG EGR+
Sbjct: 112 HFINHGASEGRS 123
>gi|195380117|ref|XP_002048817.1| GJ21109 [Drosophila virilis]
gi|194143614|gb|EDW60010.1| GJ21109 [Drosophila virilis]
Length = 587
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+AR A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 143 EIAR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 201
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 202 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 261
>gi|195120101|ref|XP_002004567.1| GI19538 [Drosophila mojavensis]
gi|193909635|gb|EDW08502.1| GI19538 [Drosophila mojavensis]
Length = 588
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+AR A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 143 EIAR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDPFDGQGGTLAHAFFPVFGG 201
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 202 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 261
>gi|291518564|emb|CBK73785.1| Bacterial surface proteins containing Ig-like domains [Butyrivibrio
fibrisolvens 16/4]
Length = 615
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR---------NP--DAFKALE 528
+ FD+ Y D+ FGS A HY G EGR +P F A
Sbjct: 27 YAAFDADYYAKQNPDVVAAFGSSAKALENHYNLFGKNEGRAGSSEDLKNSPLRQLFDASF 86
Query: 529 YIASHEDLINAFADAPD-LVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGS 585
Y + D++ AF + D L Q HF FG +EGR I F+ Y +Y DL FG
Sbjct: 87 YAKQNPDVVAAFGNNEDALFQ----HFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFGD 142
Query: 586 DRSAAAQHYITHGMKEGRALG 606
+ +H++ +G KE R LG
Sbjct: 143 NMELYYKHFVAYGQKEHRTLG 163
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 18/153 (11%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR---------NP--DAFKALEYIA 447
FD+ Y D+ FGS A HY G EGR +P F A Y
Sbjct: 30 FDADYYAKQNPDVVAAFGSSAKALENHYNLFGKNEGRAGSSEDLKNSPLRQLFDASFYAK 89
Query: 448 SHEDLINAFADAPD-LVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRG 504
+ D++ AF + D L Q HF FG +EGR + FD Y +Y DL FG +
Sbjct: 90 QNPDVVAAFGNNEDALFQ----HFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFGDNME 145
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+H++ +G KE R F + + S + +
Sbjct: 146 LYYKHFVAYGQKEHRTLGGFPSENILPSGKTAV 178
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y D++ G + +HF FG+ EGR I FD Y +Y DL FG +
Sbjct: 87 YAKQNPDVVAAFGNNEDALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFGDNMEL 146
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+H++ +G KE R F + + S + +
Sbjct: 147 YYKHFVAYGQKEHRTLGGFPSENILPSGKTAV 178
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR-----DIT-------FDSYLYLGSYDDL 411
Y D++ G H+ FG +EGR D+ FD+ Y D+
Sbjct: 35 YAKQNPDVVAAFGSSAKALENHYNLFGKNEGRAGSSEDLKNSPLRQLFDASFYAKQNPDV 94
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHF 470
FG++ A +H++ G+KEGR + F Y A++ DL F D +L HF
Sbjct: 95 VAAFGNNEDALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFGDNMELYY---KHF 151
Query: 471 SNFGCEEGR 479
+G +E R
Sbjct: 152 VAYGQKEHR 160
>gi|194754836|ref|XP_001959700.1| GF11910 [Drosophila ananassae]
gi|190620998|gb|EDV36522.1| GF11910 [Drosophila ananassae]
Length = 585
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+AR A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIAR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDED 258
>gi|163748242|ref|ZP_02155537.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Oceanibulbus indolifex HEL-45]
gi|161378489|gb|EDQ02963.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Oceanibulbus indolifex HEL-45]
Length = 351
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 44/242 (18%)
Query: 179 YCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ TPM+ DI+A Q +YG + LG++IY Q + +TI+D+GG D D + I
Sbjct: 3 FPTTPMILDILAAQWLYGPNMNTNLGDDIYAFSPSQT---YHETIWDAGGIDTFDASEIT 59
Query: 238 -GVKNYIDLNTESWSSIGGYEKNMTIAQHTV------------IESVVGSSGNDVVIGNS 284
GV IDL + S +G TI+ T IE+ +G G+D + GN
Sbjct: 60 TGVS--IDLRPGTLSDVGSTITAATISGTTALTETVGIAFGAFIENAIGGDGSDSLRGNE 117
Query: 285 ANNVFF---------ESSGNDVFDGSSGL------DTFFYYAPSYLYKIYRFENAIIVYD 329
NN+ + G+DV +S DT ++ S + I + +V
Sbjct: 118 LNNILWGGDGADIMGGGGGSDVLIAASQSTQPGTGDTAYFEGRSDTFDIVGGIDYTVVT- 176
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
A + +D L + LRF DQ I+ + S L ED + + E + YE
Sbjct: 177 ATDGSRDKLFGFQFLRFDDQLIE---LNAGSALAGAGRPEDFV------IAERVALLYEA 227
Query: 390 GL 391
L
Sbjct: 228 AL 229
>gi|300865764|ref|ZP_07110521.1| putative Hemolysin-type calcium-binding region protein
[Oscillatoria sp. PCC 6506]
gi|300336246|emb|CBN55674.1| putative Hemolysin-type calcium-binding region protein
[Oscillatoria sp. PCC 6506]
Length = 298
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSD 502
Y+ ++ D+ A A+ V G DHF+ FG E R + FD+ YL + D+
Sbjct: 13 YLENNPDVGLAIANGK--VSSGFDHFNRFGKFEDRDPNILFDTSYYLETNTDVAAAVEEG 70
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
+ AA H+I G E RNP+ + S+ + A L A +H+ G E
Sbjct: 71 KITAADHFIRFGQFERRNPNPLFDTAFYGSNNPDVTAAVQRNQLTLA--EHYLKLGQFEN 128
Query: 563 R--SITFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGRALGISGMQ---FKSVM 616
R S+ F+PD YL Y + + +A +HY+ G++E + + Q S
Sbjct: 129 RQPSLLFDPDYYLQKYPLVATAVNNGVVKSAFEHYLRFGLEE-TLVSVPPTQSEDLTSAR 187
Query: 617 NLSEKSRDKADLSLSFDHKKVDLYTDYFG---------DGNYYDSDLYSMHDINHD 663
+L + D + VD+Y+ DG D+D+ + DIN D
Sbjct: 188 SLGVLDGIQGVSDFVGDTEPVDIYSFLLNSPSNFSLTLDGLSADADVELLQDINRD 243
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 7/138 (5%)
Query: 385 HFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
HF FG E RD I FD+ YL + D+ + AA H+I G E RNP+
Sbjct: 35 HFNRFGKFEDRDPNILFDTSYYLETNTDVAAAVEEGKITAADHFIRFGQFERRNPNPLFD 94
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFG 500
+ S+ + A L +H+ G E R + FD YL Y +
Sbjct: 95 TAFYGSNNPDVTAAVQRNQLTLA--EHYLKLGQFENRQPSLLFDPDYYLQKYPLVATAVN 152
Query: 501 SDRGAAA-RHYITHGVKE 517
+ +A HY+ G++E
Sbjct: 153 NGVVKSAFEHYLRFGLEE 170
>gi|288942625|ref|YP_003444865.1| Hemolysin-type calcium-binding region [Allochromatium vinosum DSM
180]
gi|288897997|gb|ADC63833.1| Hemolysin-type calcium-binding region [Allochromatium vinosum DSM
180]
Length = 1227
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
VI++ +SGND + + ++ GND G SG DT + A Y+I E +
Sbjct: 424 VIKNTHANSGNDEIDTGAGDDTIEAGGGNDRIKGGSGTDTAVFSANFADYRIDTIEGGVS 483
Query: 327 VYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
V D N D L DVERL+F DQ I+ +N + ++ ED+ +V+
Sbjct: 484 VSDLSGNGDGVDELYDVERLQFLDQTINLINHAPTASNRTISTKEDVARVL 534
>gi|94498284|ref|ZP_01304844.1| hypothetical protein SKA58_10818 [Sphingomonas sp. SKA58]
gi|94422286|gb|EAT07327.1| hypothetical protein SKA58_10818 [Sphingomonas sp. SKA58]
Length = 1089
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 96/231 (41%), Gaps = 56/231 (24%)
Query: 122 HNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLTSVMSY----FMPQDSMMDAS 176
H HE+GH+LGL H G G Y P+ DS +VM+Y P
Sbjct: 240 HTMFHELGHSLGLAH-GQTGGAYGPL-----PTAWDSIEFTVMTYRSYVGAPLSGYSYEQ 293
Query: 177 FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIY-------------KIEVQQKDSPFIQTI 222
+G T M+ DI A+Q +YGA + GN Y ++ + + TI
Sbjct: 294 WGAPQTYMMLDIAALQAMYGADFTVNSGNTTYSWNPTTGETYINGQVAIDPGGNRIFATI 353
Query: 223 YDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIG-----------------GYEKNM 260
+D GG D DL+ NY +DLN +S G N
Sbjct: 354 WDGGGVDTYDLS------NYSSNLTLDLNPGGYSVFSQAQLAYLGNNGSSVYARGNIFNA 407
Query: 261 TIAQH---TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ Q ++IE+ G SGNDV+ GNS +NV + G+D G+ G DT +
Sbjct: 408 MLYQGNTASMIENANGGSGNDVISGNSIDNVLRGNGGDDSLYGNDGNDTLY 458
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D LDL+ I +DL +W Y T+ T +E+V G+ D + GN+A
Sbjct: 540 GVDTLDLSQIDLYGAIVDLAGGTWQYNPLYGGPWTV---TGVENVYGTQLADTITGNAAG 596
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPS 313
N + SG+D DG +G D+ F A S
Sbjct: 597 NTLYGQSGDDSIDGMNGNDSIFGGAGS 623
>gi|113474014|ref|YP_720075.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
gi|110165062|gb|ABG49602.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
Length = 928
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 46/203 (22%)
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HEIGHALGL HPG+Y+ G + Y D+ ++M+Y + Y TPM
Sbjct: 433 HEIGHALGLKHPGNYSPGERAPFL--SYAQDNNTNTMMTYI-----GLGGLNQYSTTPMT 485
Query: 186 SDIVAVQKIYGAPKG-SLGNNIYKIE-----------VQQKDSPFIQTIYDSGGDDLLDL 233
DI ++Q +YG + N Y + + D+ T++D GG D +DL
Sbjct: 486 YDIQSLQYLYGRNNNFNAENTTYSFDRVYGFFDGNQYLGSSDTETKLTLWDGGGFDTIDL 545
Query: 234 TLI------------------GGV---------KNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + GG+ YI S IA
Sbjct: 546 SKLPDLELADFTYDYRIDLREGGLITTTDAYNQHEYIAFQDTSGKKYKTSTSGTAIAYGA 605
Query: 267 VIESVVGSSGNDVVIGNSANNVF 289
V+E+++ S G+D++ N+A N F
Sbjct: 606 VMENLINSRGDDLIYANNAANKF 628
>gi|257791800|ref|YP_003182406.1| cell wall hydrolase/autolysin [Eggerthella lenta DSM 2243]
gi|257475697|gb|ACV56017.1| cell wall hydrolase/autolysin [Eggerthella lenta DSM 2243]
Length = 1805
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 370 DLIQVIGQDVFESM-KHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
D++ G+ E + +HF FG++EGR + TFD + Y SY DLR+ FG D A HY
Sbjct: 1735 DVVDACGEGNSEGIFEHFIHFGMAEGRRANETFDVFRYRTSYADLRSAFGDDLKAYYEHY 1794
Query: 427 ITHGVKEGRN 436
I +G EGR+
Sbjct: 1795 IEYGQFEGRS 1804
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 337 FLSD--VERLRFADQCIDSVNVKQRSILEYTASYE---------DLIQVIGQDVFE-SMK 384
+LSD RL AD + Q + ++Y+A Y+ D+ G D E ++
Sbjct: 452 YLSDEGCRRLGQADADAIARQFPQSAWVDYSAVYDFNYYLEYNSDVRDHYGSDDPEGALG 511
Query: 385 HFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
HF +G+ EGR +FD Y +YDDLR+VFG+D HY+ +G +EGR D
Sbjct: 512 HFLTYGMGEGRKAIASFDVDFYRQNYDDLRSVFGNDLRKYYLHYVEYGQQEGRVAD 567
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 468 DHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+HF +FG EGR TFD + Y SY DLR+ FG D A HYI +G EGR+
Sbjct: 1750 EHFIHFGMAEGRRANETFDVFRYRTSYADLRSAFGDDLKAYYEHYIEYGQFEGRS 1804
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 469 HFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
HF +G EGR +FD Y +YDDLR+VFG+D HY+ +G +EGR D
Sbjct: 512 HFLTYGMGEGRKAIASFDVDFYRQNYDDLRSVFGNDLRKYYLHYVEYGQQEGRVAD 567
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 544 PDLVQAGKD--------HFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
PD+V A + HF +FG EGR TF+ Y TSY DL + FG D A +H
Sbjct: 1734 PDVVDACGEGNSEGIFEHFIHFGMAEGRRANETFDVFRYRTSYADLRSAFGDDLKAYYEH 1793
Query: 594 YITHGMKEGRA 604
YI +G EGR+
Sbjct: 1794 YIEYGQFEGRS 1804
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 553 HFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
HF +G EGR +F+ D Y +YDDL +VFG+D HY+ +G +EGR
Sbjct: 512 HFLTYGMGEGRKAIASFDVDFYRQNYDDLRSVFGNDLRKYYLHYVEYGQQEGR 564
>gi|152991140|ref|YP_001356862.1| hypothetical protein NIS_1398 [Nitratiruptor sp. SB155-2]
gi|151423001|dbj|BAF70505.1| hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 609
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 128/353 (36%), Gaps = 99/353 (28%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDK 106
LN Q R A E V+ + FEE + DI+F V D F
Sbjct: 248 LNLIDQSRVREAFHELGSVLGVRFEEVDSNGDIRF-----SKVTPSSQDEAGFAVQEIYD 302
Query: 107 ADVWRYGIGKGTILSHN----------ALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ G+G L+++ LHEIGHA GL HP + P + Y+N
Sbjct: 303 GKMVTSGVGSDIFLANDYDVIAAPKDVILHEIGHAFGLKHPFEGSPTMP-----SSYDNT 357
Query: 157 SFLTSVMSYF-----MPQDSMMDA--SFGYCAT--PMVS------DIVAVQKIYGAPKGS 201
L ++MSY +P+ +M + SF Y P+ D++A++ +YG+ +
Sbjct: 358 --LYTIMSYTQEETALPEITMKNLGDSFEYTVQTDPIGRKSIGYYDLLALRYLYGSTEHD 415
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSIGGY---- 256
L N Y I F + D G D ++ L YIDL E SSIG +
Sbjct: 416 LTNETYDISDLYNQHAFAHIVDDGGIDTVV---LDSQEPAYIDLRGGEFLSSIGDHLPFN 472
Query: 257 -------------------------------------------EKNMTIAQHTVIESVVG 273
KN+ IE++V
Sbjct: 473 SIKQQIQEQMSLEDIPSSYFDDIYAGVLDIIQQNPSFKAQIYQGKNVVTLPENSIENIVA 532
Query: 274 SSGNDV---------VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +++ +I S N++ + S G+D DG G+DT Y P Y+
Sbjct: 533 TGADEIIYDNALDNRIITGSGNDIIYVSQGDDTIDGGEGIDTV--YLPDKQYQ 583
>gi|195153567|ref|XP_002017696.1| GL17167 [Drosophila persimilis]
gi|198460451|ref|XP_001361721.2| GA18484 [Drosophila pseudoobscura pseudoobscura]
gi|194113492|gb|EDW35535.1| GL17167 [Drosophila persimilis]
gi|198137022|gb|EAL26300.2| GA18484 [Drosophila pseudoobscura pseudoobscura]
Length = 586
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTKKTTGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D+D
Sbjct: 199 DAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFRLDDD 258
>gi|195953945|ref|YP_002122235.1| glycosyl transferase family 2 [Hydrogenobaculum sp. Y04AAS1]
gi|195933557|gb|ACG58257.1| glycosyl transferase family 2 [Hydrogenobaculum sp. Y04AAS1]
Length = 746
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL SY D+R G HYI HG +EGRNP+ F Y+ +ED+ +
Sbjct: 22 FDERYYLKSYPDIR--LGDIDPII--HYIKHGAREGRNPNPFFDTTFYLNRYEDVAKSRI 77
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ P L H+ +G +EGR+ F+S YL S D++ G + HYI HG
Sbjct: 78 N-PLL------HYILYGAKEGRWAGPNFNSGFYLLSNPDVKKA-GLN---PLLHYILHGQ 126
Query: 516 KEGR 519
EGR
Sbjct: 127 YEGR 130
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL SY D+R G HYI HG +EGRNP+ F Y+ +ED+ +
Sbjct: 22 FDERYYLKSYPDIR--LGDIDPII--HYIKHGAREGRNPNPFFDTTFYLNRYEDVAKSRI 77
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQ---HYIT 596
+ P L H+ +G +EGR FN YL S D+ + A HYI
Sbjct: 78 N-PLL------HYILYGAKEGRWAGPNFNSGFYLLSNPDV-------KKAGLNPLLHYIL 123
Query: 597 HGMKEGRALGIS 608
HG EGR I
Sbjct: 124 HGQYEGRKAKIE 135
>gi|329114944|ref|ZP_08243700.1| Hypothetical protein APO_1748 [Acetobacter pomorum DM001]
gi|326695841|gb|EGE47526.1| Hypothetical protein APO_1748 [Acetobacter pomorum DM001]
Length = 174
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
+ FDS YL +Y D+R G D H++ +G KEGRNP+A F +L Y+ + D +
Sbjct: 99 IFFDSQWYLNAYPDIREA-GVD---PLEHFLDYGAKEGRNPNALFDSLSYLRVNPD-VAG 153
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSI 565
F P + H+ +G++EGR +
Sbjct: 154 FGPGPFI------HYICYGFQEGRPL 173
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
I FDS YL +Y D+R G D H++ +G KEGRNP+A F +L Y+ + D +
Sbjct: 99 IFFDSQWYLNAYPDIREA-GVD---PLEHFLDYGAKEGRNPNALFDSLSYLRVNPD-VAG 153
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
F P + H+ +G +EGR
Sbjct: 154 FGPGPFI------HYICYGFQEGR 171
>gi|258541342|ref|YP_003186775.1| hypothetical protein APA01_02430 [Acetobacter pasteurianus IFO
3283-01]
gi|256632420|dbj|BAH98395.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635477|dbj|BAI01446.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638532|dbj|BAI04494.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641586|dbj|BAI07541.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256644641|dbj|BAI10589.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256647696|dbj|BAI13637.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256650749|dbj|BAI16683.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653740|dbj|BAI19667.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 159
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
+ FDS YL +Y D+R G D H++ +G KEGRNP+A F +L Y+ + D +
Sbjct: 84 IFFDSQWYLNAYPDIREA-GVD---PLEHFLDYGAKEGRNPNALFDSLSYLRVNPD-VAG 138
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSI 565
F P + H+ +G++EGR +
Sbjct: 139 FGPGPFI------HYICYGFQEGRPL 158
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
I FDS YL +Y D+R G D H++ +G KEGRNP+A F +L Y+ + D +
Sbjct: 84 IFFDSQWYLNAYPDIREA-GVD---PLEHFLDYGAKEGRNPNALFDSLSYLRVNPD-VAG 138
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
F P + H+ +G +EGR
Sbjct: 139 FGPGPFI------HYICYGFQEGR 156
>gi|187921346|ref|YP_001890378.1| group 1 glycosyl transferase [Burkholderia phytofirmans PsJN]
gi|187719784|gb|ACD21007.1| glycosyl transferase group 1 [Burkholderia phytofirmans PsJN]
Length = 665
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL D+ + + +HY+ HG EGRNP+ F + Y+ + D++ A
Sbjct: 41 FDRGFYLSQNKDV----AASKTDPVKHYLAHGAFEGRNPNPNFDSAAYLRKYPDVVAAGI 96
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL-GSYDDLRNVFGSDRGAAARHYITHGVK 516
+ LV H+ FG EGR T D+ G L + ++RG + GV+
Sbjct: 97 NP--LV-----HYVRFGEAEGRTATPDAARARDGRGSSLEIIESAERGKTTDAN-SAGVR 148
Query: 517 EGRN-----------PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
RN F A Y+ ++ D+ A D DHF + G+ EGR
Sbjct: 149 RARNIRESDRKKVADSGLFSATYYLDTYADIAVAKIDP-------LDHFMDQGWREGRRP 201
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
NP L Y D HYI HG G G + + F++ +
Sbjct: 202 --NPTFDLGWYADQCPDVLKAGINPLIHYIDHGKAGGFESGPNPIIFEAARKM 252
>gi|330950563|gb|EGH50823.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae Cit 7]
Length = 304
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 106/249 (42%), Gaps = 61/249 (24%)
Query: 62 WSKVVDLTFEETSIHSD----IKF------ISSNNGYVCTPRYDSR---YFMEINFDKAD 108
WS V D+ F E D I+F + G P R ++ N + AD
Sbjct: 82 WSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD 141
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY-- 165
KGT +HE GHALGL H S+ G Y +D +E+ + ++MSY
Sbjct: 142 P-----AKGTDDYLTFMHETGHALGLKH--SFEGSQYNDVLLDAKFEDARY--TIMSYTN 192
Query: 166 ---FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
F P TPM+ D+ A+Q IYGA G+++YK Q +T
Sbjct: 193 NYSFKP------------TTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFET 237
Query: 222 IYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGG----YEKN----------MTIAQHT 266
I+D+GG D +D + VK I+LN +S+IG Y N + IA
Sbjct: 238 IWDAGGKDTIDASNQEASVK--INLNEGEFSTIGKAFLDYNANPDAPTLMNSGLAIAYGA 295
Query: 267 VIESVVGSS 275
IE+ +GS+
Sbjct: 296 HIENAIGSA 304
>gi|329903526|ref|ZP_08273539.1| putative hemolysin-adenlyate cyclase protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327548309|gb|EGF33000.1| putative hemolysin-adenlyate cyclase protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 1732
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 20/124 (16%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA---PSYLYKIYRFENA- 324
+++ G +GND + G N+ F +GND+ DG +G D YY P+ I F A
Sbjct: 1460 DTLRGGTGNDTLSGGGGNDALFGQAGNDIIDGGAGTDVAQYYQSFDPTSSGAIANFRFAD 1519
Query: 325 -----IIVYDANEHK---QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ V D+ D L++VE + F+D ++ +L+ TA + L +G
Sbjct: 1520 LGNGWLQVTDSRSGSPAGTDQLTNVESMLFSDGSVN--------LLQGTAGNDTLTGTVG 1571
Query: 377 QDVF 380
+DV
Sbjct: 1572 RDVL 1575
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDTFFYYAPS 313
IE++ GS+ ND++IG+S NNV S GND DG +G+DT Y A +
Sbjct: 733 IENLTGSAYNDILIGDSGNNVLTGGSGNDTLTGNGGNDTLDGGAGIDTASYTASA 787
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIV 327
E ++GS+ D + G++ NNV G D DG +G DT Y A S + +A
Sbjct: 1116 EKLIGSAYADTLTGDAGNNVLVGLGGADRLDGGAGTDTADYSASSAGVTVNLSLSSATAQ 1175
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ DFL+++E + + Q + L A+ L G DV
Sbjct: 1176 TSTGDASGDFLANIENVTGS--------ATQANTLTGDANANVLTGGTGDDVIS 1221
>gi|170051326|ref|XP_001861713.1| matrix metalloproteinase [Culex quinquefasciatus]
gi|167872650|gb|EDS36033.1| matrix metalloproteinase [Culex quinquefasciatus]
Length = 536
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T R + L+ W + Y+ ++ + D E+ +E+A+ A WS+ DL
Sbjct: 91 TDSRSKRYALQGSRWKVKALTYR---ISKYPARLDRLEVE---KEIAK-AFSVWSEYTDL 143
Query: 69 TF---EETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGK 116
TF + +H DI+F + +G Y Y + +FD A+ W G +
Sbjct: 144 TFTPKKSAPVHIDIRFEVNEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEFWTIGKSR 203
Query: 117 GTILSHNALHEIGHALGLMH--------PGSYNGGYPVYGVDND 152
GT L A HE GH+LGL H Y G PV+ +D+D
Sbjct: 204 GTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFRLDSD 247
>gi|144897609|emb|CAM74473.1| Peptidase M10A and M12B, matrixin and adamalysin [Magnetospirillum
gryphiswaldense MSR-1]
Length = 1536
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 41/74 (55%), Gaps = 13/74 (17%)
Query: 125 LHEIGHALGLMHPGSYN-GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
LHEIGHALGL H G YN GG P N Y DS L S+MSYF ++ Y
Sbjct: 575 LHEIGHALGLEHAGDYNGGGSPT----NAY--DSRLYSIMSYF------GGSALEYPLNL 622
Query: 184 MVSDIVAVQKIYGA 197
+DI A+Q +YGA
Sbjct: 623 QENDIAAIQALYGA 636
>gi|254500886|ref|ZP_05113037.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
DFL-11]
gi|222436957|gb|EEE43636.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
DFL-11]
Length = 1702
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 43/166 (25%)
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDL----INAFADAPDLVQVGKDHFSNFG 474
G+A H+ G +EGR+P+A F Y+ + D+ +N F DH++ G
Sbjct: 11 GSAEEHFNLFGFQEGRDPNAHFDTSFYLGQNPDVAAAGVNPF-----------DHYNLLG 59
Query: 475 CEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAA-----RHYITHGVKEGRNPDA---- 523
EGR FD Y Y D+ AAA H+I G EGR+P+A
Sbjct: 60 ESEGRSPNSLFDPVFYAEQYPDV---------AAAGVSLFEHFINFGASEGRSPNASIAS 110
Query: 524 -----FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
F Y+A++ D+ A + L + +H+ FG++E RS
Sbjct: 111 QLESGFDTEAYLAANPDVAAAIENG--LFASAYEHWGLFGFKEDRS 154
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 65/158 (41%), Gaps = 41/158 (25%)
Query: 384 KHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAA-----RHYITHGVKEGRN 436
+HF FG EGRD FD+ YLG D+ AAA HY G EGR+
Sbjct: 15 EHFNLFGFQEGRDPNAHFDTSFYLGQNPDV---------AAAGVNPFDHYNLLGESEGRS 65
Query: 437 PDA-FKALEYIASHEDLINAFADAPDLVQVGK---DHFSNFGCEEGRFVT---------- 482
P++ F + Y + PD+ G +HF NFG EGR
Sbjct: 66 PNSLFDPVFYAEQY----------PDVAAAGVSLFEHFINFGASEGRSPNASIASQLESG 115
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAA-RHYITHGVKEGR 519
FD+ YL + D+ + A+A H+ G KE R
Sbjct: 116 FDTEAYLAANPDVAAAIENGLFASAYEHWGLFGFKEDR 153
>gi|254415759|ref|ZP_05029517.1| hypothetical protein MC7420_3543 [Microcoleus chthonoplastes PCC
7420]
gi|196177465|gb|EDX72471.1| hypothetical protein MC7420_3543 [Microcoleus chthonoplastes PCC
7420]
Length = 393
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 100/249 (40%), Gaps = 36/249 (14%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDITFDSY---LYLGSYDDLRNVFGSDR 419
Y A+Y D+ + +F S + HF + GL EGR SY YL + D+ +
Sbjct: 11 YLANYPDVATAVAAGLFGSGLDHFLKHGLGEGRVEISSSYEEDTYLDNNPDVAAAVTAGL 70
Query: 420 -GAAARHYITHGVKEGR---------NPDAFKALE---YIASHEDLINAFADAPDLVQVG 466
+ HY +G EGR P +F + Y++ + D+ A A G
Sbjct: 71 FSSGLEHYALYGQFEGRAGVFSDGVVPPASFSLFDESSYLSLNPDV--AAAVTAGAFNSG 128
Query: 467 KDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN-VFGSDRGAAARHYITHGVKEGRNPDA 523
+HF G +EGR + ++ YL + D+ V G G+ H+ HG E R
Sbjct: 129 FEHFQQLGLQEGRISSPLWNEGAYLAANPDVAAAVTGGAFGSGLHHFALHGQLENRPGAL 188
Query: 524 FKALEYIASHEDLINAFADAPDLVQA--------GKDHFSNFGYEEGRSITFNPDLYLTS 575
AL +E+ D PD+ A G +H++ FG EGR F T
Sbjct: 189 PGALVPFGFNEEFY--LLDNPDVAAAVNAGGFGSGLEHYNEFGQFEGRGAYFGG----TP 242
Query: 576 YDDLWNVFG 584
DL FG
Sbjct: 243 GSDLVVAFG 251
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 38/220 (17%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRN--PDAFKALEYIASHEDL 452
D+ FD +YL +Y D+ + G+ H++ HG+ EGR +++ Y+ ++ D+
Sbjct: 3 DVLFDESVYLANYPDVATAVAAGLFGSGLDHFLKHGLGEGRVEISSSYEEDTYLDNNPDV 62
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A A L G +H++ +G EGR F +
Sbjct: 63 --AAAVTAGLFSSGLEHYALYGQFEGRAGVF----------------------------S 92
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPD 570
GV + F Y++ + D+ A A +G +HF G +EGR S +N
Sbjct: 93 DGVVPPASFSLFDESSYLSLNPDV--AAAVTAGAFNSGFEHFQQLGLQEGRISSPLWNEG 150
Query: 571 LYLTSYDDL-WNVFGSDRSAAAQHYITHGMKEGRALGISG 609
YL + D+ V G + H+ HG E R + G
Sbjct: 151 AYLAANPDVAAAVTGGAFGSGLHHFALHGQLENRPGALPG 190
>gi|194886655|ref|XP_001976657.1| GG19900 [Drosophila erecta]
gi|190659844|gb|EDV57057.1| GG19900 [Drosophila erecta]
Length = 584
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 49/229 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS+ DLTF + +H +IKF+ S G + +
Sbjct: 140 EIGR-AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGG 198
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A+ W G +GT L A HE GH+LGL H Y G P + +D+D
Sbjct: 199 DAHFDDAEQWTIGSHRGTNLFQVAAHEFGHSLGLSHSDQSAALMAPFYRGFEPSFKLDDD 258
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ S + + + + Y AT Q+ Y PK L ++I
Sbjct: 259 DK-----AAIQSLYGKKSYPLRPTNVYPAT--------TQRPYTPPKVPLDDSIC----- 300
Query: 213 QKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSI 253
KDS + T+++S GD LT + Y L ++ W +
Sbjct: 301 -KDSK-VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGL 347
>gi|119493877|ref|ZP_01624442.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119452389|gb|EAW33580.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 538
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGR-DITFD--SYLYLGSYDDLRNVFGSDR 419
Y D+ + + +F S + HF E G EGR DI+ D + Y + D+ D
Sbjct: 55 YLEKNPDVAEAVNSGIFPSGLAHFIEIGYEEGRADISSDYHDFFYRQTNRDILPFIRVDT 114
Query: 420 GA-------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
A H++ G +EGR ++F EY+ + ++I A +++ G+DH+
Sbjct: 115 SESNGLFHNALEHFLKFGAEEGRYSNSFFEAEYLKQYPNIIPAIESG--VLRTGRDHYEQ 172
Query: 473 FG-CEEGRFVTF 483
FG EEGR TF
Sbjct: 173 FGQFEEGRKATF 184
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 466 GKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLRNVFGSDRGA-------AARHYITHGV 515
G HF G EEGR + + Y + D+ D A H++ G
Sbjct: 74 GLAHFIEIGYEEGRADISSDYHDFFYRQTNRDILPFIRVDTSESNGLFHNALEHFLKFGA 133
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG-YEEGRSITFNPDLYLT 574
+EGR ++F EY+ + ++I A +++ G+DH+ FG +EEGR TF T
Sbjct: 134 EEGRYSNSFFEAEYLKQYPNIIPAIESG--VLRTGRDHYEQFGQFEEGRKATF----IGT 187
Query: 575 SYDDLWNVFGS 585
S D+ FG+
Sbjct: 188 SSIDILESFGT 198
>gi|157110775|ref|XP_001651241.1| matrix metalloproteinase [Aedes aegypti]
gi|108878613|gb|EAT42838.1| matrix metalloproteinase [Aedes aegypti]
Length = 573
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 30/149 (20%)
Query: 29 RYKPDVLTTHRLS-----FDITELNPNAQEVARWALGEWSKVVDLTF---EETSIHSDIK 80
R+K LT +R+S D E++ +E+A+ A WS+ DLTF + +H DI+
Sbjct: 119 RWKVKALT-YRISKYPSRLDRAEVD---KEIAK-AFSVWSEYTDLTFTAKKSAPVHIDIR 173
Query: 81 FISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
F + +G Y Y + +FD A+ W G +GT L A HE GH+
Sbjct: 174 FEVNEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEFWTIGKSRGTNLFQVAAHEFGHS 233
Query: 132 LGLMHPGS--------YNGGYPVYGVDND 152
LGL H Y G PV+ +D+D
Sbjct: 234 LGLSHSDVRSALMAPFYRGYDPVFRLDSD 262
>gi|190890431|ref|YP_001976973.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Rhizobium etli CIAT 652]
gi|190695710|gb|ACE89795.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium binding
protein [Rhizobium etli CIAT 652]
Length = 2608
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 101/237 (42%), Gaps = 56/237 (23%)
Query: 122 HNALHEIGHALGLMHP---GSYNGGYPVYGVDNDYENDSFLTSVMSYFM----PQDSMMD 174
H HE+GHALGL H G +NG V N Y DS ++M+Y D +
Sbjct: 149 HTLAHELGHALGLKHAHEAGDFNG----IVVPNAY--DSLEYTIMTYRTYVGDNADGLEY 202
Query: 175 ASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK------------IEVQQKDSPFI-Q 220
G T M+ DI A+Q++YGA + G+ +Y+ + D+ I
Sbjct: 203 EHDGAPQTFMMLDIAALQEMYGADYTTNSGDTVYRWNPNEGITYVDGVAAITPDANRIFA 262
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--------SIGG----------------Y 256
TI+D GG D DL+ IDL +S +GG Y
Sbjct: 263 TIWDGGGIDTYDLSAYT-TALSIDLRAGGYSVFSRGQLADLGGGPNNGYARGNIFNALLY 321
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ N+ ++IE+V SGND ++GN ANN + + G+D G G DT A S
Sbjct: 322 DGNV----ASLIENVQAGSGNDKIVGNEANNTLWGNDGDDSLYGGIGNDTLIGGADS 374
>gi|172035829|ref|YP_001802330.1| putative peptidase [Cyanothece sp. ATCC 51142]
gi|171697283|gb|ACB50264.1| putative peptidase [Cyanothece sp. ATCC 51142]
Length = 1143
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 145/351 (41%), Gaps = 86/351 (24%)
Query: 50 NAQEVARWALGEWSKVVDLTFEETS-----IHSDIKFISSNNGYVCTPRYDSRYFMEINF 104
N +E+ W V+D+ F E + DI+ SNN Y + + ++
Sbjct: 122 NYREIFAWL----ENVIDVDFVEVDEINKDTYGDIRIQDSNNPNYAYAYYPTSPYSKVAG 177
Query: 105 D---KADVWRYGIGKGTILSHNA--------LHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D ++ RYG G H+ +HE+GHALGL H S G P+ ++
Sbjct: 178 DVHLNSNYDRYGDTNG--FQHDPGKHGYMTLVHELGHALGLAHTHS---GTPLSAQLDNT 232
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY------ 207
+N SVM+Y +S AT M DI A+Q +YGA + G+ Y
Sbjct: 233 DN-----SVMTYNFTGNS--------AATFMPLDIAALQHLYGAKTHNAGDTTYVFGNYI 279
Query: 208 ------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLN-----TESWSSIG 254
+ + + + QT++DS G D LD + + + ++DL ++++SS
Sbjct: 280 DQVTVNGVSLVETSNRTKQTLWDSDGIDTLDFSGLNAQSSGFHLDLRQGGLLSKTFSSTT 339
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY----- 309
Y ++ +E+V+ SS ND + NNV E SG + D +G D +Y
Sbjct: 340 DYSTAVSYGFD--VENVINSSSNDTIY---LNNVANEISGY-LSDRFTGHDKIYYGSNED 393
Query: 310 -----YAPSYLYKIYRFENAIIVY-------------DANEHKQDFLSDVE 342
YA + + + +N I+ + D N+ Q SD+E
Sbjct: 394 ILKLDYASNEVTQTQSGQNLILNFGSNGSIELVNYYADPNQQIQILYSDIE 444
>gi|329848977|ref|ZP_08264005.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844040|gb|EGF93609.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1784
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 138/362 (38%), Gaps = 82/362 (22%)
Query: 125 LHEIGHALGLMH------------PGSYNGGYPVYGVDN-DYENDSFLTSVMSYFM-PQD 170
+HEIGHA+GL H G +G P +G +DS+ S+M+Y P +
Sbjct: 292 MHEIGHAMGLKHGHQDYTGFDLTVGGYLDGPGPRFGTRALPASHDSWAYSIMTYRSDPGN 351
Query: 171 ------SMMDASFGYCATPMVSDIVAVQKIYGA----PKGSLGNNIYKIE---------- 210
S F T M +DI A+Q +YGA P+ + +Y
Sbjct: 352 NPGGNPSFQGDQFNQPQTFMQNDIAALQYMYGADFTSPEAHPTDTVYTFNSITGRMSING 411
Query: 211 VQQKDSPF---------IQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGY 256
V Q+ F +TI+D GG D D NY IDL WS++
Sbjct: 412 VGQETPTFDAVNNVGKIFRTIWDGGGVDTYDF------DNYTTNQTIDLTPGGWSTMNSL 465
Query: 257 E---------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ N+ A ++IE+ G SGND +IGN NNV + GN
Sbjct: 466 QLADLRPLSATYVAAPGNIANALLYNGDLRSLIENANGGSGNDNIIGNDVNNVIHGNGGN 525
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G G D + A + + +++ D N+ + D A +D++
Sbjct: 526 DTVFGDDGNDLLYGEAGNDTLDGWIGNDSVYGGDGNDFMYGY--DGNDFLIASTGLDTLR 583
Query: 356 VKQRS-ILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFD--SYLYLGSYDD 410
+ + L + ++ G D V E SEG D+ + SY L ++++
Sbjct: 584 GESGNDYLSGGTGNDSMVGDTGNDTYVLEEAGDIVVEAASEGTDLVYAYFSYTLLANFEN 643
Query: 411 LR 412
L
Sbjct: 644 LT 645
>gi|296532479|ref|ZP_06895198.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267196|gb|EFH13102.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 487
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 36/193 (18%)
Query: 384 KHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-F 440
H+ +FG EGR FD YL D+R G + HY+ G +EGR+P+ F
Sbjct: 90 AHYAQFGWREGRATGSLFDGAYYLRVNQDVREA-GIN---PVEHYLNFGWREGRDPNPLF 145
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNV 498
Y+A + D+ A + +H+ +G E R FD+ YL + +L +
Sbjct: 146 DTSFYLAQNADVAEAGINP-------LEHYLLWGRHEARDANPFFDAGFYLQQHPELVEI 198
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA--FADAPDLVQAGKD---H 553
G+D A HY G +EG IA+ I A PD+ AG D H
Sbjct: 199 -GADPLA---HYSEQGWREG-----------IAASRGFITKVYLAQNPDVAAAGIDPLRH 243
Query: 554 FSNFGYEEGRSIT 566
+ +G EGR+++
Sbjct: 244 YLEYGQAEGRAVS 256
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 53/229 (23%)
Query: 421 AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+A HY G +EGR + F Y+ ++D+ A + +H+ NFG EGR
Sbjct: 87 SAEAHYAQFGWREGRATGSLFDGAYYLRVNQDVREAGINP-------VEHYLNFGWREGR 139
Query: 480 --FVTFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDAF-KALEYIASHED 535
FD+ YL D+ ++ G HY+ G E R+ + F A Y+ H
Sbjct: 140 DPNPLFDTSFYLAQNADV-----AEAGINPLEHYLLWGRHEARDANPFFDAGFYLQQH-- 192
Query: 536 LINAFADAPDLVQAGKD---HFSNFGYEEGRS----------ITFNPDLYLTSYDDLWNV 582
P+LV+ G D H+S G+ EG + + NPD+ D L
Sbjct: 193 --------PELVEIGADPLAHYSEQGWREGIAASRGFITKVYLAQNPDVAAAGIDPL--- 241
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
+HY+ +G EGRA+ SG L+ + + + +L+
Sbjct: 242 ---------RHYLEYGQAEGRAVS-SGTPASITGRLTASTDEDSGATLT 280
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 32/158 (20%)
Query: 375 IGQDVFES----MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA-AARHYI 427
+ QDV E+ ++H+ FG EGRD FD+ YL D+ ++ G HY+
Sbjct: 115 VNQDVREAGINPVEHYLNFGWREGRDPNPLFDTSFYLAQNADV-----AEAGINPLEHYL 169
Query: 428 THGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFVT- 482
G E R+ + F A Y+ H P+LV++G D H+S G EG +
Sbjct: 170 LWGRHEARDANPFFDAGFYLQQH----------PELVEIGADPLAHYSEQGWREGIAASR 219
Query: 483 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
F + +YL D+ G D RHY+ +G EGR
Sbjct: 220 GFITKVYLAQNPDVAAA-GID---PLRHYLEYGQAEGR 253
>gi|317154878|ref|YP_004122926.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
aespoeensis Aspo-2]
gi|316945129|gb|ADU64180.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
aespoeensis Aspo-2]
Length = 911
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ D GG D ++ + + G + ++L S S++ G ++TIA T IE GND++
Sbjct: 716 TLEDGGGTDTINASAVTG-NSIVNLTPGSVSTLAG--TSLTIAAGTTIEHAHTGDGNDIL 772
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFF 308
GN ANN F GND G +G D +
Sbjct: 773 TGNDANNNLFGWRGNDAISGGAGNDLLY 800
>gi|170740196|ref|YP_001768851.1| FG-GAP repeat-containing protein [Methylobacterium sp. 4-46]
gi|168194470|gb|ACA16417.1| FG-GAP repeat protein [Methylobacterium sp. 4-46]
Length = 861
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNI---------------YKIEVQQKDSPFIQTIYDSG 226
TPM DI+A Q+IYGAP S NN+ + V Q + T++ +G
Sbjct: 323 TPMFLDILAAQQIYGAPTTSTLNNVTFGFNSTVPGLINQYFNFTVNQHP---VVTLFATG 379
Query: 227 GDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ LDL+ G N I L +++S G N+ I T++ +G++G+D + N
Sbjct: 380 ASNTLDLS---GWSNGATISLTPGTFTSANGMINNIGIGPSTILTKAIGTTGSDTFLPNP 436
Query: 285 A-NNVFFESSGNDVF 298
+ + GND F
Sbjct: 437 SYVTTMTGNGGNDTF 451
>gi|329848423|ref|ZP_08263451.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843486|gb|EGF93055.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1374
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 153/436 (35%), Gaps = 113/436 (25%)
Query: 8 YTTERIADHLLRDQYWSNYFIR--------------YKPDVLTTHRLSFDITELNPNAQE 53
YT ++ D +L W+ I Y+P LT H N Q
Sbjct: 122 YTGNQLVDAVLFGSRWTVTNITFSFPATAEFYETPYYEPGHLTNH------IPFNAAQQT 175
Query: 54 VARWALGEWSKVVDLTFEETS----IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV 109
AR+A + +TF E + H I+ ++N + F + D+
Sbjct: 176 AARYAFSLVAGYTSVTFTEVTESAETHGIIRLSQTDNDTALGSAEGN--FPGSDASDGDI 233
Query: 110 WRYGIGK--------GTILSHNALHEIGHALGLMHPGS-------YNGGY-----PVYGV 149
W + G +HEIGH LGL H NGGY P YG
Sbjct: 234 WFGSTNQPFYLTPAIGNWGQATMMHEIGHTLGLKHGQDNYTTLDLTNGGYLDGPGPHYGT 293
Query: 150 DNDYEN-DSFLTSVMSYFMPQD---SMMDASFGYCATPMVSDIVAVQKIYGAPKGS---- 201
N D + S+M+Y S + T M +DI A+Q +YGA S
Sbjct: 294 AALPANRDGWAWSLMTYRSAPGFTASFQGDRYNQPQTYMQADIAALQFMYGANFTSHATD 353
Query: 202 ----------------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY--- 242
+G +I +T++D G D +L N+
Sbjct: 354 SVYTFSTTTGEMFINGVGQGTPEINAATGIGKIFRTLWDGDGVDTYNL------ANFSDN 407
Query: 243 --IDL-----NTESWSSIG-------------GYEKNMTIAQ---HTVIESVVGSSGNDV 279
IDL +T S + +G G N + Q ++IE+ + GND+
Sbjct: 408 QTIDLRPGQFSTFSQAQLGDSRPLVTGFTAQPGNIANALLYQGDVRSLIENAIAGVGNDI 467
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+IGN A N + GNDV DG +G D A + + + +V +A+ H D ++
Sbjct: 468 LIGNQAANALTGNDGNDVLDGGAGDDVMTGGAGDDTFGVDSSGD--VVTEASGHGTDLIA 525
Query: 340 ---------DVERLRF 346
DVE L
Sbjct: 526 ATVSYTLGEDVEHLTL 541
>gi|195430660|ref|XP_002063372.1| GK21871 [Drosophila willistoni]
gi|194159457|gb|EDW74358.1| GK21871 [Drosophila willistoni]
Length = 597
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETS---IHSDIKFISSN---------NGYVCTPRYDSRYFM 100
E+ R A WS DLTF + +H +IKF+ G + +
Sbjct: 145 EIGR-AFAVWSLDTDLTFTRKTSGPVHIEIKFVEGEHGDGDAFDGQGGTLAHAFFPVFGG 203
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
+ +FD A++W G +GT L A HE GH+LGL H Y G PV+ +D+D
Sbjct: 204 DAHFDDAELWTIGSSRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGYEPVFKLDDD 263
Query: 153 --------YENDSFLTS--VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
Y + T+ ++ P + SF TP+ I KI
Sbjct: 264 DKAAIQSLYGRKTTNTNQYTPTFNSPPSTQRPTSFTPPRTPLDDSICKDSKI 315
>gi|78356461|ref|YP_387910.1| hypothetical protein Dde_1416 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218866|gb|ABB38215.1| hypothetical protein Dde_1416 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 1424
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N T+ + + G +GND++ G + N+ SGND+ DG +G DT + S
Sbjct: 441 GGEGNDTLDGGADNDFLSGGAGNDLLHGGAGNDTLTGGSGNDLLDGGAGNDTVVFRGASG 500
Query: 315 LYKIYRFENAIIVYDANEHKQDFL---SDVERLRFAD 348
Y I R ++ + N +D + ++VE+L+F D
Sbjct: 501 QYTITRTQDGGYRIEDNVEGRDGITTVTNVEQLQFKD 537
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
T+ +++VG +GND++ GN ++V +GND+ G G DTF + A
Sbjct: 1277 TLPDNLVGGAGNDILFGNEGHDVLNGGAGNDILTGGQGADTFVFTA 1322
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G+ GND + GN ++ SG+D+ DG SG+DT Y
Sbjct: 198 LAGTGGNDTIFGNEGDDTLIGGSGDDMLDGGSGIDTASY 236
>gi|226946643|ref|YP_002801716.1| serine peptidase [Azotobacter vinelandii DJ]
gi|226721570|gb|ACO80741.1| serine peptidase [Azotobacter vinelandii DJ]
Length = 659
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQ 264
I ++ S + D G+D +D +++ + L S++GG +TIA
Sbjct: 520 ILAVQALSGQSGRSTLVDDDAGNDWIDAAAA--IRDLSLSLVAGQTSTLGGIPF-LTIAP 576
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T+IE+ +G GND + GN A+N+ + G+D G +G DT + + Y +
Sbjct: 577 GTLIENAIGGDGNDRIEGNEADNLIYGMRGDDTLIGGAGNDTAVFLGRAEDYSVSEAGGV 636
Query: 325 IIVYDANEHKQDFLSDVERLRF 346
I V + + D L+ E F
Sbjct: 637 ITVQNLSGGGTDTLTGFEGWLF 658
>gi|254504135|ref|ZP_05116286.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222440206|gb|EEE46885.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 449
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL LIG E W S G I Q G++GND + G + N+
Sbjct: 222 DLVLIGA---------ELWQSTFGTTNGDDILQ--------GTAGNDSLFGGNGNDQLTG 264
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVYD--ANEHKQDFLSDVERLRFAD 348
G+DV DG +G DT + Y ++ N I+V D AN +DF ++ E ++F+
Sbjct: 265 GLGDDVLDGGNGTDTVVFSGTREQYAVFAGSNGRIMVADTVANRDGRDFAANFETIQFSG 324
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLG 406
+D +++E + + Q+ ++ HF+ + E + T S++Y G
Sbjct: 325 ATLDITT----ALIEPSDTDNSAFQIYRFYNSDTGAHFFTSSVEERNAVIETLPSFVYEG 380
Query: 407 -SYDDLRNVFGSDRGAAARHY 426
SYD NV D A R Y
Sbjct: 381 NSYD--SNVSADDGTAVYRFY 399
>gi|33866834|ref|NP_898393.1| secreted protease [Synechococcus sp. WH 8102]
gi|33639435|emb|CAE08819.1| possible secreted protease [Synechococcus sp. WH 8102]
Length = 1313
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 143/351 (40%), Gaps = 75/351 (21%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS----------- 74
Y+I D ++ +F+ P QE ++ +S V L+FE +S
Sbjct: 96 YYIGQTGDSISAAGDTFNAVTPKPGEQEAIEASMKAFSDVAQLSFEASSSLSGNTTIAWG 155
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ +D + + + I + D + G+ +HE+GHALGL
Sbjct: 156 VSADESIYHGIADFPGDSEATAASGVIIFNEDYDADGGEVESGSYFYLTYIHELGHALGL 215
Query: 135 MHPGSYNGGYPVY-------------GVDN---DYENDSFLTSVM------SYFMPQDS- 171
HP +NGG + G D+ +++N+S +VM SY D+
Sbjct: 216 AHP--HNGGEAGWNSYESALFPGVSEGADSSAGEFDNNSTPWTVMTYNDSSSYLAVSDAS 273
Query: 172 --MMDASFGYCAT--------PMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQ 220
+ D S GY + P+ DI AVQ +YG + + G+ +Y + + + +
Sbjct: 274 GQLDDVSPGYQSIDGYLENLGPI--DIAAVQYLYGPNHQSNAGDTVYALNEYELNG--YR 329
Query: 221 TIYDSGGDDLLDL--------------TL---IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+I+D+ G+D +D TL IGG +N E Y+ ++T+A
Sbjct: 330 SIWDASGNDTIDAFDSSSSVVIDLRNATLENEIGGGGFLSKINDEYKGYTIAYD-SLTLA 388
Query: 264 Q------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
VIE+ GS ND + GN +N+ G+D G++G DT +
Sbjct: 389 GFGDGAYQAVIENARGSFLNDSLQGNDYDNLLEGEGGDDTLIGAAGADTLY 439
>gi|238623419|emb|CAS06704.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 197
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 52 QEVARWALGEWSKVVDLTFEETSI------HSDIKFISSNNG-----YVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + H S++NG Y+ + +
Sbjct: 53 KEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESWY 112
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSF 158
IN D A V + G+G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 113 LINKDYA-VNKI-PGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTY-RDAVYGEDTR 169
Query: 159 LTSVMSYF 166
SVMSY+
Sbjct: 170 AYSVMSYW 177
>gi|75910921|ref|YP_325217.1| polymorphic membrane protein [Anabaena variabilis ATCC 29413]
gi|75704646|gb|ABA24322.1| Polymorphic membrane protein [Anabaena variabilis ATCC 29413]
Length = 1037
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNY--IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
IQ I +GG+D + G N ++L T + +I K +T++ + VIE+VVG +G
Sbjct: 822 IQEIT-TGGNDTISF---AGTNNAARVNLGTIATQTINSNLK-LTLSANNVIENVVGGNG 876
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+D +IGNS NN +GNDV G G DT
Sbjct: 877 SDRLIGNSLNNTLTGGNGNDVLTGRGGADTLI 908
>gi|321471531|gb|EFX82503.1| hypothetical protein DAPPUDRAFT_316218 [Daphnia pulex]
Length = 550
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 27/171 (15%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
++P +++ R ++ +W + YK T D+ +E+AR A W+
Sbjct: 145 VRPGHSSTRRKRFAIQGSHWPKKQLTYKIKKYTPDMSPSDVD------REIAR-AFQMWA 197
Query: 64 KVVDLTF-----EETSIHSDIKFISSNNGYVCTPRYD------------SRYFMEINFDK 106
V DL F + + DI F + +G P ++ Y + +FD+
Sbjct: 198 DVTDLAFVHVNNQSADVDIDILFATGEHG--SCPSFNDGPGGTLAHATYPIYGGDAHFDE 255
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYEND 156
+ W KGT L A HE GH+LGL H YP YG D++ D
Sbjct: 256 GETWTLDSVKGTNLFQVATHEFGHSLGLEHTHVTTAVMYPFYGYSPDFKLD 306
>gi|291561206|emb|CBL40005.1| hypothetical protein CK3_01310 [butyrate-producing bacterium SS3/4]
Length = 192
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y DL IG D HFY G++EGR FD +Y + DL+ FGSD
Sbjct: 117 YYNTYPDLQTAIGTDKLALFTHFYNSGMAEGRKGCAEFDVNVYKENNTDLQTAFGSDLRK 176
Query: 422 AARHYITHGVKEGR 435
HY+ G EGR
Sbjct: 177 YYEHYMNTGWAEGR 190
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y +Y DL+ G+D+ A H+ G+ EGR A F Y ++ DL AF
Sbjct: 112 FDPDYYYNTYPDLQTAIGTDKLALFTHFYNSGMAEGRKGCAEFDVNVYKENNTDLQTAFG 171
Query: 542 DAPDLVQAGKDHFSNFGYEEGRS 564
DL + +H+ N G+ EGR+
Sbjct: 172 S--DLRKY-YEHYMNTGWAEGRT 191
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y +Y DL+ G+D+ A H+ G+ EGR A F Y ++ DL AF
Sbjct: 112 FDPDYYYNTYPDLQTAIGTDKLALFTHFYNSGMAEGRKGCAEFDVNVYKENNTDLQTAFG 171
Query: 458 DAPDLVQVGKDHFSNFGCEEGR 479
DL + +H+ N G EGR
Sbjct: 172 S--DLRKY-YEHYMNTGWAEGR 190
>gi|75812711|ref|YP_320328.1| hemolysin-type calcium-binding region [Anabaena variabilis ATCC
29413]
gi|75705467|gb|ABA25139.1| Hemolysin-type calcium-binding region [Anabaena variabilis ATCC
29413]
Length = 2296
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 149/383 (38%), Gaps = 66/383 (17%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVYDAN 331
G +GND + G +++ GNDV +G +G D L + +++D
Sbjct: 1720 GGAGNDTLTGGDGDDIITGGEGNDVLNGGAGDDVLNVDTTDNLAALRGGTGFDTVIFDTG 1779
Query: 332 EHKQDF-LSDVERLRF--ADQCIDSVNVKQRSILEYT--ASYEDLIQVIGQDVFESMKHF 386
F L D + F A+ +++ + + ++ + L+ IG D E F
Sbjct: 1780 TTAFSFALGDANSIEFLIANDGANTITYYGATSVVFSGLGGNDVLVSGIGNDRLEGGDGF 1839
Query: 387 YEFGLSEGRDITF--------------DSYLYLGS-YDDLRNVFGSDRGAAARHYITHGV 431
S G D+ D+ +Y GS + ++ N GS Y+ V
Sbjct: 1840 DTLTSSLGNDVLIGGRGDDILDGGDGYDTAVYQGSIFTNVVNFNGS------YTYVKDTV 1893
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADA-----------PDLVQV--------GKDHFSN 472
+ D +E S +D + + + PD+V G H+
Sbjct: 1894 NNRNDTDRVSNVEAF-SFDDGVRTWQELRDFEDFYRLRNPDVVAAINANKFSSGFYHYVI 1952
Query: 473 FGCEEGRFVTFD--SYLYLGSYDDLRNVF--GSDRGAAARHYITHGVKEGRNPDAFKALE 528
+G EGR ++FD Y Y D+ GS R A HYI+ G +GR + +
Sbjct: 1953 WGKNEGRPISFDFNEAYYRLLYKDVDAAIKAGSVRSGLA-HYISTGFAQGRQTN----FD 2007
Query: 529 YIASHEDLINAFADAPDLVQAGKD-----HFSNFGYEEGRSIT--FNPDLYLTSYDDL-W 580
+ ++ L+N DA ++AG HF N GY EGR++ FN + Y ++ D+
Sbjct: 2008 FNETYYRLLNPDVDAA--IKAGTMPSALYHFINHGYSEGRTLASQFNENYYRSANADVNA 2065
Query: 581 NVFGSDRSAAAQHYITHGMKEGR 603
+ + HYI G EGR
Sbjct: 2066 GIIAGTYKSGLDHYIKTGFAEGR 2088
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 425 HYITHGVKEGRNPDAFKALE--YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
HY+ G EGR P +F E Y ++D+ A V+ G H+ + G +GR
Sbjct: 1949 HYVIWGKNEGR-PISFDFNEAYYRLLYKDVDAAIKAGS--VRSGLAHYISTGFAQGRQTN 2005
Query: 483 FD---SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLIN 538
FD +Y L + D + +A H+I HG EGR F Y +++ D +N
Sbjct: 2006 FDFNETYYRLLNPDVDAAIKAGTMPSALYHFINHGYSEGRTLASQFNENYYRSANAD-VN 2064
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
A A ++G DH+ G+ EGR F+
Sbjct: 2065 AGIIA-GTYKSGLDHYIKTGFAEGRMARFD 2093
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G+ N+ +GND DG +G DTF + A + + +
Sbjct: 2147 GEAGNDALYGDDGNDYLIGGAGNDTMDGGAGTDTFSWDATALKSNDLMAGGLDTLLNPKG 2206
Query: 333 HKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTAS 367
+ DF S+VE L+ Q + S+ + T+S
Sbjct: 2207 DRIDFTSNVEALLKIGGQTLASLTADKTLTNTVTSS 2242
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 125/311 (40%), Gaps = 49/311 (15%)
Query: 269 ESVVGSSGNDVVI--GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ S GNDV+I + V+ GS + SY Y
Sbjct: 1840 DTLTSSLGNDVLIGGRGDDILDGGDGYDTAVYQGSI-FTNVVNFNGSYTY---------- 1888
Query: 327 VYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES-M 383
V D N + D +S+VE F D ++ Y D++ I + F S
Sbjct: 1889 VKDTVNNRNDTDRVSNVEAFSFDDGVRTWQELRDFEDF-YRLRNPDVVAAINANKFSSGF 1947
Query: 384 KHFYEFGLSEGRDITFD--SYLYLGSYDDLRNVF--GSDRGAAARHYITHGVKEGRNPDA 439
H+ +G +EGR I+FD Y Y D+ GS R A HYI+ G +GR +
Sbjct: 1948 YHYVIWGKNEGRPISFDFNEAYYRLLYKDVDAAIKAGSVRSGLA-HYISTGFAQGRQTN- 2005
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKD-----HFSNFGCEEGRFVT--FDSYLYLGSY 492
++ ++ L+N DA ++ G HF N G EGR + F+ Y +
Sbjct: 2006 ---FDFNETYYRLLNPDVDAA--IKAGTMPSALYHFINHGYSEGRTLASQFNENYYRSAN 2060
Query: 493 DDLR-NVFGSDRGAAARHYITHGVKEGRNP--DAFKAL--------EYI--ASHEDLINA 539
D+ + + HYI G EGR DAF + +YI +++ D++
Sbjct: 2061 ADVNAGIIAGTYKSGLDHYIKTGFAEGRMARFDAFSSTLTHGTNNKDYIVGSANNDVLRG 2120
Query: 540 FADAPDLVQAG 550
FA D++ AG
Sbjct: 2121 FA-GDDIINAG 2130
>gi|291566536|dbj|BAI88808.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2483
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 380 FESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN- 436
F +HF EFG EGR+ + F YL D+ V +R A H++ G+ E R
Sbjct: 95 FNLREHFREFGKFEGREFSAFFSVTRYLEKNTDISLVI--NREEAFSHFLDFGLNEAREF 152
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
D F A Y ++ DL A + + HF G E R + FD+ YL D
Sbjct: 153 SDFFSASFYAEANPDLA---AITQETLVSKFAHFLGVGQFENRRCSRVFDANNYLQLNPD 209
Query: 495 LRNVFGSDRG-----AAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQ 548
+ + +A H+IT G E R + F EY+ + DL+ F ++ ++
Sbjct: 210 VSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLV-PFVESGEI-- 266
Query: 549 AGKDHFSNFGYEEGRSITFN 568
DH+ FG E R + +
Sbjct: 267 NAIDHWVRFGISERREFSLS 286
Score = 40.8 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
S+ Y D+ VI ++ E+ HF +FGL+E R+ + F + Y + DL +
Sbjct: 117 SVTRYLEKNTDISLVINRE--EAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQE 174
Query: 418 DRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDL-VQVGK-DHFSNFG 474
+ H++ G E R F A Y+ + D+ ++ +L +Q+ HF G
Sbjct: 175 TLVSKFAHFLGVGQFENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRG 234
Query: 475 CEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
E R + FD YL DL S A H++ G+ E R
Sbjct: 235 RSENRQFSNIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFGISERR 281
>gi|87118818|ref|ZP_01074717.1| hypothetical protein MED121_17364 [Marinomonas sp. MED121]
gi|86166452|gb|EAQ67718.1| hypothetical protein MED121_17364 [Marinomonas sp. MED121]
Length = 1167
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 243 IDLNTESWSSIG--GYEKNMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+DLN E SS G G + + + + +E+VVG+ +DV+ GN+ NN+ GN++ D
Sbjct: 547 VDLNDEVQSSFGDGGLDADESDDVTLISVENVVGTQYDDVITGNNENNLLMGLEGNNILD 606
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
G +G D Y + Y I ++++ AN D LS++E L F D
Sbjct: 607 GDNGFDIARYSGSIWDYTINTNMSSVVNSSAN--INDSLSNIEFLSFED 653
>gi|329848973|ref|ZP_08264001.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844036|gb|EGF93605.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 754
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 97/244 (39%), Gaps = 62/244 (25%)
Query: 125 LHEIGHALGLMHP-----------GSY-NGGYPVYGVDN-DYENDSFLTSVMSYFMPQDS 171
LHEIGH+LGL H G Y +G P YG +D + S+M+Y S
Sbjct: 149 LHEIGHSLGLKHGHSDYTTLDLTIGGYIDGPGPRYGTRALPAAHDGWAWSLMTY-RSSPS 207
Query: 172 MMDASFGYCA-----TPMVSDIVAVQKIYGAPKG-SLGNNIYKI---------------- 209
+ D SF A T M +DI A+Q +YGA G + N+ Y
Sbjct: 208 VGDPSFQGDAFNQPQTFMQNDIAALQYMYGAYFGHNASNSTYTFNNFTGEMFINGVSQGM 267
Query: 210 ----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG---------Y 256
++ +TI+D G D D + G + IDL WS + Y
Sbjct: 268 PAQDSLRNNGGKIFRTIWDGNGIDTYDFSNFTGNQT-IDLAPGGWSMMNAAQLADLYPLY 326
Query: 257 EKNMTIAQH------------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+N T + ++IE+ G SGND + GN ANN + GND G
Sbjct: 327 FENPTPPGNVANALLYNNDTRSLIENANGGSGNDFLFGNLANNALHGNGGNDQLLSGDGH 386
Query: 305 DTFF 308
D+ F
Sbjct: 387 DSLF 390
>gi|323138318|ref|ZP_08073389.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
gi|322396401|gb|EFX98931.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
Length = 754
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 78/189 (41%), Gaps = 21/189 (11%)
Query: 381 ESMKHFYEFGLSEG--RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ ++HF G G FD YL SY+D+R S + HY+ G +EGR +
Sbjct: 150 DPLEHFIRNGWRLGYHPSPNFDMRKYLQSYEDVR---ASGQNPLI-HYLKSGRREGRRIE 205
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
E H AP + + S +E FD+ YL Y D+R+
Sbjct: 206 PLPESETWKLHAG-TRVHQGAPLYATLFEKQISATLLDESGL--FDAEWYLNRYPDVRSA 262
Query: 499 FGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
RG H+I+ G E R+P F A Y +ED+++ + LV H+ F
Sbjct: 263 GMDPRG----HFISSGSAEFRSPGPGFDAEWYCRRYEDVLDEGYEP--LV-----HYVKF 311
Query: 558 GYEEGRSIT 566
G EGR T
Sbjct: 312 GRAEGRDAT 320
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 383 MKHFYEFG-LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-F 440
+K +FG S+ FD+ Y +Y D+ G + +HY+T G +EGRNP+ F
Sbjct: 7 LKLLPDFGKRSKSLKRCFDTDYYTHAYPDV----GEAKIDPLQHYLTAGWREGRNPNLNF 62
Query: 441 KALEYIASHEDL-----------INAFADAPDLVQVGKDHFSNF-GCEEGRFVTFDSYLY 488
+ Y+ +++D+ +N + L D S E F+ + +
Sbjct: 63 NTIWYLHAYQDVARQNQNPLVDYVNGGQASGRLSSPPVDESSWMTKAAENEFLPASAREF 122
Query: 489 LGSYDDLRN-----------VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 536
+ YD ++ + +G H+I +G + G +P F +Y+ S+ED
Sbjct: 123 IACYDMIKKSVLFDETFYTTCYPDAQGDPLEHFIRNGWRLGYHPSPNFDMRKYLQSYED- 181
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
+ A P + H+ G EGR I P+
Sbjct: 182 VRASGQNPLI------HYLKSGRREGRRIEPLPE 209
>gi|218249074|ref|YP_002374445.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8801]
gi|218169552|gb|ACK68289.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8801]
Length = 1269
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 50/210 (23%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY-FMPQDSMMDASFGYCATP 183
+HEIGHA+GL H + +D +N+++ +VM Y F+ D ++F
Sbjct: 218 IHEIGHAMGLKHS------FEATALDPALDNNNY--TVMGYNFLYGDVSTASTF------ 263
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKI-----EVQQKDSPFI-------QTIYDSGGDDLL 231
M DI A+Q +YGA + N+ Y+ + P + QTI D+GG D L
Sbjct: 264 MPLDIAALQSLYGAKATNTTNDTYRFTNRIDQFTINGQPSVTSSNNIKQTIVDTGGIDTL 323
Query: 232 DLT-LIGGVKNY-IDLN------------TESWSSIGGYEKNMT----IAQHTVIESVVG 273
D + L+ Y IDLN ++S G K+ + ++ TVIE+VV
Sbjct: 324 DFSQLVSYSAGYRIDLNGSGSITKQDAYLNTNYSVNGVTYKSTSSGTFLSYDTVIENVVN 383
Query: 274 SSGNDVVIGNSANNVF-----FESSGNDVF 298
SS D + NS+ N+ +++ NDV
Sbjct: 384 SSSKDSIYLNSSANIISGYSSTKATSNDVI 413
>gi|257062161|ref|YP_003140049.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8802]
gi|256592327|gb|ACV03214.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8802]
Length = 1269
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 50/210 (23%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY-FMPQDSMMDASFGYCATP 183
+HEIGHA+GL H + +D +N+++ +VM Y F+ D ++F
Sbjct: 218 IHEIGHAMGLKHS------FEATALDPALDNNNY--TVMGYNFLYGDVSTASTF------ 263
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKI-----EVQQKDSPFI-------QTIYDSGGDDLL 231
M DI A+Q +YGA + N+ Y+ + P + QTI D+GG D L
Sbjct: 264 MPLDIAALQSLYGAKATNTTNDTYRFTNRIDQFTINGQPSVTSSNNIKQTIVDTGGIDTL 323
Query: 232 DLT-LIGGVKNY-IDLN------------TESWSSIGGYEKNMT----IAQHTVIESVVG 273
D + L+ Y IDLN ++S G K+ + ++ TVIE+VV
Sbjct: 324 DFSQLVSYSAGYRIDLNGSGSITKQDAYLNTNYSVNGVTYKSTSSGTFLSYDTVIENVVN 383
Query: 274 SSGNDVVIGNSANNVF-----FESSGNDVF 298
SS D + NS+ N+ +++ NDV
Sbjct: 384 SSSKDSIYLNSSANIISGYSSTKATSNDVI 413
>gi|27378825|ref|NP_770354.1| hypothetical protein bll3714 [Bradyrhizobium japonicum USDA 110]
gi|27351974|dbj|BAC48979.1| bll3714 [Bradyrhizobium japonicum USDA 110]
Length = 4128
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 21/102 (20%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVF------------------DGSSGLDTFFY 309
+ SV GS+ ND +IG N +FF G+D DG +G D Y
Sbjct: 3519 VNSVQGSNFNDTLIGGGGNELFFGGGGSDTINAGGGNDQITGQAGADTIDGGAGTDMAIY 3578
Query: 310 YAPSYLYKIYRFENA-IIVYDANEHK--QDFLSDVERLRFAD 348
PS Y I I V D+N + D L++VE L+F+D
Sbjct: 3579 TGPSSAYTITTLAGGQIQVADSNSARDGTDVLTNVEVLQFSD 3620
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVY 328
SV GS+ D +IG++ +++F + GND +G +G D Y Y I V
Sbjct: 1959 SVTGSAFADTLIGSAGSDMFVGNGGNDQINGGAGGDIAIYSGTKTQYSISTDGAGHATVT 2018
Query: 329 D--ANEHKQDFLSDVERLRFADQCI 351
D A D L++VE L+F + +
Sbjct: 2019 DNVAGRDGTDTLTNVEALQFTNGTV 2043
>gi|124021808|ref|YP_001016115.1| hypothetical protein P9303_00951 [Prochlorococcus marinus str. MIT
9303]
gi|123962094|gb|ABM76850.1| Hypothetical protein P9303_00951 [Prochlorococcus marinus str. MIT
9303]
Length = 373
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 14/190 (7%)
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
L ++ +HE+GHALGL HP G V G+ + + + +VM+Y P ++
Sbjct: 135 LRYSLIHELGHALGLEHPFDNTDGDVVDGITDPWTSAYPEDTVMAYRSPSKGSWPNAY-- 192
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V+D+ A+ I+GA N +I + + + I +GGDD L G
Sbjct: 193 ----TVNDLEALVSIWGAETQVFSNQSEQIFGED----YSEVIIAAGGDD----ALFGAG 240
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N L + + G + + + + G GND++ G ++ G+D++
Sbjct: 241 GNDDLLGGIGFDLVRGGPGDDVVRGGKNADQLYGGRGNDLLRGGRGHDQLKGGVGDDLYW 300
Query: 300 GSSGLDTFFY 309
G G D F +
Sbjct: 301 GGPGADLFRF 310
>gi|121592988|ref|YP_984884.1| hypothetical protein Ajs_0558 [Acidovorax sp. JS42]
gi|120605068|gb|ABM40808.1| hypothetical protein Ajs_0558 [Acidovorax sp. JS42]
Length = 1880
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 20/118 (16%)
Query: 377 QDVFESMKHFYEFGLSEG--RDITFDSYLYLGSYDDLRNVFGSDRGAAAR--HYITHGVK 432
Q ++HF + G + G + TFD Y ++ DL+N +D AA H++ +G+
Sbjct: 42 QGTLSPIEHFVQIGAARGYKPNATFDPTYYKNAFADLKN---TDFNAADLLYHFMQYGLD 98
Query: 433 EGRNPDA----FKALEYIASHEDLINAFADAPDLVQVGKD-------HFSNFGCEEGR 479
EGR P+A F Y+A++ D + A+ +A +L Q G H+ FG EGR
Sbjct: 99 EGRTPNAALATFDGTAYLAANPD-VAAYVNA-NLAQFGGSATNGALAHYVKFGAAEGR 154
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 24/144 (16%)
Query: 475 CEEGRFVTFDSYLYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS 532
+ G FV FDS+ Y Y D + + H++ G G P+A F Y +
Sbjct: 20 TKTGNFVAFDSFFYGQQYMADYQGTL-----SPIEHFVQIGAARGYKPNATFDPTYYKNA 74
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRS-------------ITFNPDLYLTSYDDL 579
DL N +A DL+ HF +G +EGR+ + NPD+ +L
Sbjct: 75 FADLKNTDFNAADLLY----HFMQYGLDEGRTPNAALATFDGTAYLAANPDVAAYVNANL 130
Query: 580 WNVFGSDRSAAAQHYITHGMKEGR 603
GS + A HY+ G EGR
Sbjct: 131 AQFGGSATNGALAHYVKFGAAEGR 154
>gi|116254749|ref|YP_770585.1| calcium-binding domain-containing protein [Rhizobium leguminosarum
bv. viciae 3841]
gi|115259397|emb|CAK10534.1| putative calcium-binding cadherin-like RTX protein Exported via
PrsDE Type I secretion [Rhizobium leguminosarum bv.
viciae 3841]
Length = 589
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS GND++ G + N+ +GND +G +G+DT + +++ + N+ + +
Sbjct: 293 GSGGNDIINGKAGNDKLTGGAGNDTINGGAGIDTAIFSG-NFVNYSFALNNSDHILTSAL 351
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+D L+DVE +RFAD D K + A+ +L Q+ V ES + GL
Sbjct: 352 EGKDTLTDVEFVRFADGVYDF--AKGTFTPDANAAPINL-QLSKTSVSESTPTWTTLGLL 408
Query: 393 EGRDITFDSYLY 404
D D Y
Sbjct: 409 SAHDADGDKLTY 420
>gi|317050412|ref|YP_004111528.1| Hemolysin-type calcium-binding region [Desulfurispirillum indicum
S5]
gi|316945496|gb|ADU64972.1| Hemolysin-type calcium-binding region [Desulfurispirillum indicum
S5]
Length = 1296
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 256 YEKNMTIAQHTVI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+++ +T A+ ++ +++ G++GND +IG S N++F S+G+D+ DG G++T Y
Sbjct: 766 FDRALTEAEVFLLADAITGTAGNDNLIGTSNNDIFIGSAGDDIIDGVGGVNTVVYVGNHT 825
Query: 315 LYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFAD 348
LY++ +N Y D L++++ L F D
Sbjct: 826 LYQV--IDNGGGSYTVVKPDGTDTLTNIQYLSFGD 858
>gi|307591965|ref|YP_003899556.1| peptidase M23 [Cyanothece sp. PCC 7822]
gi|306985610|gb|ADN17490.1| Peptidase M23 [Cyanothece sp. PCC 7822]
Length = 3503
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 76/287 (26%)
Query: 79 IKFISSNNGYVCT--PRYDSRY------FMEINFDKADVWRYGIGKGTILSHNA------ 124
I+ + S++GY P D Y ++ FD+ +G G +A
Sbjct: 1643 IRIVPSSSGYASAFGPTEDELYTVASDIYLNQTFDR-------LGDGNGFQESAGYHGYA 1695
Query: 125 --LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+HE+GHALG+ HP + + P + D+ + + P T
Sbjct: 1696 ALIHELGHALGINHPNAKDVLIPPEELHYDH---TLMGGYGGGVAP------------GT 1740
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK----------DSPF--IQTIYDSGGDDL 230
M D+ A+Q +YGA + + N Y+ + +SP+ Q ++DSGG D
Sbjct: 1741 FMSYDLKALQYLYGAKQYNETNTTYQFSARTDKFSVNGQTFLESPYQLKQLLWDSGGLDT 1800
Query: 231 --------------LDLTLIGGVKNYIDLNTESWSSIGG--YEKN--MTIAQHTVIESVV 272
LDLT G + D N +++ G Y N IA + +IE+V+
Sbjct: 1801 FDFSNLTPNTSGYHLDLTPGGILTPQSDYNAGTYTVNGVTYYTSNYGTVIAYNVLIENVI 1860
Query: 273 GSSGNDVVIGNSANNVF-----FESSGNDVF---DGSSGLDTFFYYA 311
SS ND + NSA N F +GND++ D + LD YY+
Sbjct: 1861 NSSSNDEIFANSAANTFKGYSPTRQTGNDIYWNTDSNDTLDLSAYYS 1907
>gi|221235629|ref|YP_002518066.1| iron-regulated protein FrpC [Caulobacter crescentus NA1000]
gi|220964802|gb|ACL96158.1| iron-regulated protein frpC [Caulobacter crescentus NA1000]
Length = 657
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 44/235 (18%)
Query: 200 GSLGNNIYK-------IEVQQKDSPFIQTIYD----SGGDDLLDLTLIGGVKNYID---- 244
G GN++ + +E + D I ++ D GGDD L ++ G NY+D
Sbjct: 335 GDAGNDVLRAEGGGDVLEGGEGDDFLIGSLSDILIGGGGDDQLSVS---GGSNYVDGGDG 391
Query: 245 ---LNTESWSSIGGYEKNMTIAQHTV---------IESVVGSSGNDVVIGNSANNVFFES 292
L T +++ + + + IAQ IE+++G GNDV+I N+ +N
Sbjct: 392 VDALQTFTYADVK-VDLRIVIAQEIAPGFKVEVRGIENLIGGHGNDVLIANADDNRIEGL 450
Query: 293 SGNDVFDGSSGLDTFFY-YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FAD 348
+GNDV DG G D Y AP ++ A + D D L +E LR +AD
Sbjct: 451 TGNDVIDGGEGFDFATYRSAPGGVW--VDLTKAGVAQDTRSAGIDTLISIEGLRGSVYAD 508
Query: 349 QCIDSVNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
I + LE Y+D LI G+D+ F + G + D+
Sbjct: 509 VLIGNAGANA---LE--GEYDDDLLIGGGGRDLLTGGASADTFKFAVGDSVALDN 558
>gi|225377885|ref|ZP_03755106.1| hypothetical protein ROSEINA2194_03545 [Roseburia inulinivorans DSM
16841]
gi|225210323|gb|EEG92677.1| hypothetical protein ROSEINA2194_03545 [Roseburia inulinivorans DSM
16841]
Length = 282
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
S DL G D + HF G+ EGR F+ +Y +Y DL+ FG+D +
Sbjct: 49 SNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQAAFGNDLASYCA 108
Query: 425 HYITHGVKEGRN 436
HY +G EGRN
Sbjct: 109 HYAANGAAEGRN 120
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 513 HGVKEGRNPDAFKAL----EYIASHEDLINAFA-DAPDLVQAGKDHFSNFGYEEGRS--I 565
+ K+ N A++A+ Y S+ DL AF DA L +HF + G EGRS
Sbjct: 26 NAAKKSSNTGAYQAVFDAEYYYNSNPDLQAAFGYDAQKLF----NHFVSSGIYEGRSGCA 81
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
FN +Y +Y DL FG+D ++ HY +G EGR
Sbjct: 82 NFNVAIYRANYPDLQAAFGNDLASYCAHYAANGAAEGR 119
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 429 HGVKEGRNPDAFKAL----EYIASHEDLINAFA-DAPDLVQVGKDHFSNFGCEEGR--FV 481
+ K+ N A++A+ Y S+ DL AF DA L +HF + G EGR
Sbjct: 26 NAAKKSSNTGAYQAVFDAEYYYNSNPDLQAAFGYDAQKLF----NHFVSSGIYEGRSGCA 81
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
F+ +Y +Y DL+ FG+D + HY +G EGRN
Sbjct: 82 NFNVAIYRANYPDLQAAFGNDLASYCAHYAANGAAEGRN 120
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y S DL+ FG D H+++ G+ EGR+ A F Y A++ DL AF
Sbjct: 41 FDAEYYYNSNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQAAFG 100
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT 482
+ DL H++ G EGR T
Sbjct: 101 N--DLASYCA-HYAANGAAEGRNAT 122
>gi|16126847|ref|NP_421411.1| calcium-binding protein [Caulobacter crescentus CB15]
gi|13424183|gb|AAK24579.1| calcium-binding protein [Caulobacter crescentus CB15]
Length = 650
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 44/235 (18%)
Query: 200 GSLGNNIYK-------IEVQQKDSPFIQTIYD----SGGDDLLDLTLIGGVKNYID---- 244
G GN++ + +E + D I ++ D GGDD L ++ G NY+D
Sbjct: 328 GDAGNDVLRAEGGGDVLEGGEGDDFLIGSLSDILIGGGGDDQLSVS---GGSNYVDGGDG 384
Query: 245 ---LNTESWSSIGGYEKNMTIAQHTV---------IESVVGSSGNDVVIGNSANNVFFES 292
L T +++ + + + IAQ IE+++G GNDV+I N+ +N
Sbjct: 385 VDALQTFTYADVK-VDLRIVIAQEIAPGFKVEVRGIENLIGGHGNDVLIANADDNRIEGL 443
Query: 293 SGNDVFDGSSGLDTFFY-YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FAD 348
+GNDV DG G D Y AP ++ A + D D L +E LR +AD
Sbjct: 444 TGNDVIDGGEGFDFATYRSAPGGVW--VDLTKAGVAQDTRSAGIDTLISIEGLRGSVYAD 501
Query: 349 QCIDSVNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
I + LE Y+D LI G+D+ F + G + D+
Sbjct: 502 VLIGNAGANA---LE--GEYDDDLLIGGGGRDLLTGGASADTFKFAVGDSVALDN 551
>gi|312378823|gb|EFR25285.1| hypothetical protein AND_09518 [Anopheles darlingi]
Length = 530
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Query: 37 THRLSFDITELNPNA--QEVARWALGEWSKVVDLTFEET---SIHSDIKFISSNNG---- 87
T+R+S L A E+A+ A G WS+ DL F ++H DI+F + +G
Sbjct: 58 TYRISKYPKRLERTAVDNEIAK-AFGVWSRYTDLRFTPKRSGAVHIDIRFEENEHGDGDP 116
Query: 88 -----YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--- 139
Y Y + +FD A+ W +GT L A HE GH+LGL H
Sbjct: 117 FDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQVAAHEFGHSLGLSHSDVRSA 176
Query: 140 -----YNGGYPVYGVDND 152
Y G PV+ +D+D
Sbjct: 177 LMAPFYRGYDPVFQLDSD 194
>gi|284052046|ref|ZP_06382256.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 331
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 84/207 (40%), Gaps = 33/207 (15%)
Query: 380 FESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN- 436
F +HF EFG EGR+ + F YL D+ V +R A H++ G+ E R
Sbjct: 95 FNLREHFREFGKFEGREFSAFFSVTRYLEKNTDISLVI--NREEAFSHFLDFGLNEAREF 152
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQ-----VGKDHFSNFGCEEGRFVTFDSYLYLGS 491
D F A Y ++ DL A LV +G F N C FD+ YL
Sbjct: 153 SDFFSASFYAEANPDL--AAITQETLVSKFAHFLGVGQFENRRCSR----VFDANNYLQL 206
Query: 492 YDDLRNVFGSDRG-----AAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPD 545
D+ + +A H+IT G E R + F EY+ + DL+
Sbjct: 207 NPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLV-------P 259
Query: 546 LVQAGK----DHFSNFGYEEGRSITFN 568
V++G+ DH+ FG E R + +
Sbjct: 260 FVESGEINAIDHWVRFGISERREFSLS 286
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
S+ Y D+ VI ++ E+ HF +FGL+E R+ + F + Y + DL +
Sbjct: 117 SVTRYLEKNTDISLVINRE--EAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQE 174
Query: 418 DRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDL-VQVGK-DHFSNFG 474
+ H++ G E R F A Y+ + D+ ++ +L +Q+ HF G
Sbjct: 175 TLVSKFAHFLGVGQFENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRG 234
Query: 475 CEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
E R + FD YL DL S A H++ G+ E R
Sbjct: 235 RSENRQFSNIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFGISERR 281
>gi|291087214|ref|ZP_06345741.2| conserved hypothetical protein [Clostridium sp. M62/1]
gi|291076001|gb|EFE13365.1| conserved hypothetical protein [Clostridium sp. M62/1]
Length = 234
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFA 541
FD+ Y +DL FG ++ H++T G+KEGR +AF Y ++ DL+ AF
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 212
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D + A +H+ NFGY+E R
Sbjct: 213 DN---LPAYYEHYMNFGYDENR 231
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASH 449
+ E D FD+ Y +DL FG ++ H++T G+KEGR +AF Y ++
Sbjct: 145 VPEHIDRIFDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENN 204
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
DL+ AF D + +H+ NFG +E R
Sbjct: 205 ADLVQAFGDN---LPAYYEHYMNFGYDENRIC 233
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 524 FKALEYIASHEDLINAFA-DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLW 580
F A+ Y +EDL AF + DL+ +HF G +EGR S FN +Y + DL
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDLL----NHFLTSGMKEGRVASEAFNISVYKENNADLV 208
Query: 581 NVFGSDRSAAAQHYITHGMKEGR 603
FG + A +HY+ G E R
Sbjct: 209 QAFGDNLPAYYEHYMNFGYDENR 231
>gi|119482191|ref|XP_001261124.1| matrix metalloproteinase [Neosartorya fischeri NRRL 181]
gi|119409278|gb|EAW19227.1| matrix metalloproteinase [Neosartorya fischeri NRRL 181]
Length = 616
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 69/200 (34%)
Query: 58 ALGEWSKVVDLTFEE--TSIHSDIKFISSNNGYV-------------------CTPRYDS 96
AL +WS V LTF E ++ +D++F+ ++ + P
Sbjct: 127 ALADWSNVTPLTFAELPSTQPADLRFMWASGNHANEPVEKDFDGLGGVLAHAFFPPPSGG 186
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+I+FD+ ++W T L + ALHEIGHALGL H DN
Sbjct: 187 TLAGQIHFDEDELW-----TATGLRNAALHEIGHALGLNH-----------SPDN----- 225
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
SVMS F+ ++ + + DIV VQ +YG Q+
Sbjct: 226 ---LSVMSAFVNTLAIKPLT--------MDDIVGVQSLYG---------------QRPVG 259
Query: 217 PFIQTIYDSGGDDLLDLTLI 236
PF +++DSGG + L+
Sbjct: 260 PFT-SVFDSGGHGMPSFDLM 278
>gi|254501413|ref|ZP_05113564.1| Matrixin family [Labrenzia alexandrii DFL-11]
gi|222437484|gb|EEE44163.1| Matrixin family [Labrenzia alexandrii DFL-11]
Length = 378
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 47/172 (27%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKF-ISSNNGYVCTPRY-DSRY 98
D +PN Q+ R A W++V +++F E S + I+F + + +G T + DSR+
Sbjct: 78 DAAITDPNFQQAVRQAFDVWAQVANISFREVTDSSSTQIRFAMDAIDGVSNTLGFADSRF 137
Query: 99 F------------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+++ FD A+ W T A+HEIGHALG+ H N
Sbjct: 138 SSLDGGNTFTTDSVQVIFDTAESW-----TTTAFLSTAIHEIGHALGIGHSEDPNAIMTA 192
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
V+ +Y + QD DI AVQ IYGA
Sbjct: 193 VVVNENYGTS----------LTQD----------------DINAVQAIYGAA 218
>gi|307152381|ref|YP_003887765.1| LVIVD repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306982609|gb|ADN14490.1| LVIVD repeat protein [Cyanothece sp. PCC 7822]
Length = 1290
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSIGGYE 257
G GN+ YK V + + +GG D LD TL+ VK ++L T + ++
Sbjct: 1051 GGNGNDSYKYSVISQLGSDTISETATGGTDTLDFSGTLVD-VK--VNLGTTTSQTVVTNN 1107
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+T++ + VIE+++G SG+D +IGNS NN GND G G D+
Sbjct: 1108 LKLTLSANNVIENIIGGSGSDRLIGNSLNNTLTGGDGNDNLSGGGGNDSL 1157
>gi|295092519|emb|CBK78626.1| hypothetical protein [Clostridium cf. saccharolyticum K10]
Length = 198
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFA 541
FD+ Y +DL FG ++ H++T G+KEGR +AF Y ++ DL+ AF
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 176
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D + A +H+ NFGY+E R
Sbjct: 177 DN---LPAYYEHYMNFGYDENR 195
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASH 449
+ E D FD+ Y +DL FG ++ H++T G+KEGR +AF Y ++
Sbjct: 109 VPEHIDRIFDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENN 168
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
DL+ AF D + +H+ NFG +E R
Sbjct: 169 ADLVQAFGDN---LPAYYEHYMNFGYDENRIC 197
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 524 FKALEYIASHEDLINAFA-DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLW 580
F A+ Y +EDL AF + DL+ +HF G +EGR S FN +Y + DL
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDLL----NHFLTSGMKEGRVASEAFNISVYKENNADLV 172
Query: 581 NVFGSDRSAAAQHYITHGMKEGR 603
FG + A +HY+ G E R
Sbjct: 173 QAFGDNLPAYYEHYMNFGYDENR 195
>gi|240269310|gb|ACS52520.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269312|gb|ACS52521.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269314|gb|ACS52522.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269316|gb|ACS52523.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269318|gb|ACS52524.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269320|gb|ACS52525.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269322|gb|ACS52526.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269324|gb|ACS52527.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269326|gb|ACS52528.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269328|gb|ACS52529.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269330|gb|ACS52530.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269332|gb|ACS52531.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269334|gb|ACS52532.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269336|gb|ACS52533.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269338|gb|ACS52534.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269340|gb|ACS52535.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269342|gb|ACS52536.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269344|gb|ACS52537.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269346|gb|ACS52538.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269348|gb|ACS52539.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269350|gb|ACS52540.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269352|gb|ACS52541.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269354|gb|ACS52542.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269356|gb|ACS52543.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269360|gb|ACS52545.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269362|gb|ACS52546.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269364|gb|ACS52547.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269366|gb|ACS52548.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269368|gb|ACS52549.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269370|gb|ACS52550.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269372|gb|ACS52551.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269374|gb|ACS52552.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269376|gb|ACS52553.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269378|gb|ACS52554.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269380|gb|ACS52555.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269382|gb|ACS52556.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269384|gb|ACS52557.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269386|gb|ACS52558.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269388|gb|ACS52559.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269392|gb|ACS52561.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269394|gb|ACS52562.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269396|gb|ACS52563.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269398|gb|ACS52564.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269400|gb|ACS52565.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269402|gb|ACS52566.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269404|gb|ACS52567.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269406|gb|ACS52568.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269408|gb|ACS52569.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269410|gb|ACS52570.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269412|gb|ACS52571.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269414|gb|ACS52572.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269416|gb|ACS52573.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269418|gb|ACS52574.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269420|gb|ACS52575.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269422|gb|ACS52576.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269424|gb|ACS52577.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269426|gb|ACS52578.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269428|gb|ACS52579.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269430|gb|ACS52580.1| putative matrix metalloproteinase [Anopheles merus]
gi|240269432|gb|ACS52581.1| putative matrix metalloproteinase [Anopheles quadriannulatus]
gi|240269434|gb|ACS52582.1| putative matrix metalloproteinase [Anopheles melas]
Length = 210
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 23/138 (16%)
Query: 37 THRLSFDITELNPNA--QEVARWALGEWSKVVDLTF---EETSIHSDIKFISSNNG---- 87
T+R+S L A +E+A+ A G WS+ DL F + ++H DI+F + +G
Sbjct: 48 TYRISKYPRRLERTAVDKEIAK-AFGVWSEYTDLRFTPKKTGAVHIDIRFEENEHGDGDP 106
Query: 88 -----YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--- 139
Y Y + +FD A+ W +GT L A HE GH+LGL H
Sbjct: 107 FDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQVAAHEFGHSLGLSHSDVRSA 166
Query: 140 -----YNGGYPVYGVDND 152
Y G PV+ +D+D
Sbjct: 167 LMAPFYRGYDPVFRLDSD 184
>gi|240269390|gb|ACS52560.1| putative matrix metalloproteinase [Anopheles gambiae]
Length = 210
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 23/138 (16%)
Query: 37 THRLSFDITELNPNA--QEVARWALGEWSKVVDLTF---EETSIHSDIKFISSNNG---- 87
T+R+S L A +E+A+ A G WS+ DL F + ++H DI+F + +G
Sbjct: 48 TYRISKYPRRLERTAVDKEIAK-AFGVWSEYTDLRFTPKKTGAVHIDIRFEENEHGDGDP 106
Query: 88 -----YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--- 139
Y Y + +FD A+ W +GT L A HE GH+LGL H
Sbjct: 107 FDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQVAAHEFGHSLGLSHSDVRSA 166
Query: 140 -----YNGGYPVYGVDND 152
Y G PV+ +D+D
Sbjct: 167 LMAPFYRGYDPVFRLDSD 184
>gi|317970592|ref|ZP_07971982.1| VBCS repeat-containing protein [Synechococcus sp. CB0205]
Length = 289
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
Y++ + D I T+ SG L+DL ++ G D +S I G N+++A
Sbjct: 85 YRVALTIADGSGIDTLDFSGYTKSSLIDLYVMTG-----DEYKTRFSQINGSLNNLSLAV 139
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
TVIE+ +G G+D++ N NNV + GND F+ SSG D
Sbjct: 140 GTVIENAIGGYGDDILKDNQFNNVLIGNDGNDRFEVSSGYDVI 182
>gi|302671134|ref|YP_003831094.1| hypothetical protein bpr_I1776 [Butyrivibrio proteoclasticus B316]
gi|302395607|gb|ADL34512.1| hypothetical protein bpr_I1776 [Butyrivibrio proteoclasticus B316]
Length = 677
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 28/145 (19%)
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D+ G+ A ARHY G++EGRN A D+ AF
Sbjct: 55 DVVKAVGNSYEALARHYDLFGMREGRN----------AYSGDVKAAFI-----------R 93
Query: 470 FSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKA 526
+N + GR + FD+ Y D VFG+D H+I +G+ EGR P + F A
Sbjct: 94 LANSQYKLGRGIASVFDAKWYAAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRTPSETFNA 153
Query: 527 LEYIASHEDL----INAFADAPDLV 547
+ + ++++ AFAD P++V
Sbjct: 154 DTFFSENKEMAVLVAAAFADKPEVV 178
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 30/124 (24%)
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDI-------------------------TFDSYLY 404
D+++ +G +H+ FG+ EGR+ FD+ Y
Sbjct: 55 DVVKAVGNSYEALARHYDLFGMREGRNAYSGDVKAAFIRLANSQYKLGRGIASVFDAKWY 114
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDL----INAFADA 459
D VFG+D H+I +G+ EGR P + F A + + ++++ AFAD
Sbjct: 115 AAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRTPSETFNADTFFSENKEMAVLVAAAFADK 174
Query: 460 PDLV 463
P++V
Sbjct: 175 PEVV 178
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 23/112 (20%)
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D+ G+ A ARHY G++EGRN A D+ AF
Sbjct: 55 DVVKAVGNSYEALARHYDLFGMREGRN----------AYSGDVKAAFI-----------R 93
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+N Y+ GR I F+ Y D VFG+D + +H+I +G+ EGR
Sbjct: 94 LANSQYKLGRGIASVFDAKWYAAHNPDAVKVFGNDPAKLFEHFIIYGLSEGR 145
>gi|254563923|ref|YP_003071018.1| hypothetical protein METDI5608 [Methylobacterium extorquens DM4]
gi|254271201|emb|CAX27213.1| hypothetical protein METDI5608 [Methylobacterium extorquens DM4]
Length = 781
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 102/278 (36%), Gaps = 59/278 (21%)
Query: 126 HEIGHALGLMH-PGSYNG-GYPVYGVDNDYE---NDSFLTSVMSYFMPQDSMMDASFGYC 180
HEIGH LG + P + G ++ +N L ++ + +MD G+
Sbjct: 128 HEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPVVLDGARAHVWGSEDLMDPYLGWG 187
Query: 181 ATPMVSDI-VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI----QTIYDSGGDDLLDL-- 233
+SD+ +A+ + G P I ++ D ++ T + GGDD +D
Sbjct: 188 QRSYISDLDLAMLQDKGMP----------ISTERADKMWLGNRADTFFAYGGDDWIDGGW 237
Query: 234 ---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L GG N ++++G+ GND + G + ++
Sbjct: 238 GDDKLFGGAGN---------------------------DTLIGADGNDALDGGAGDDTLI 270
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G D DG G+D S Y +Y ++ V D L+ +E L F D
Sbjct: 271 GGNGGDTLDGGEGIDRAVLTGRSQDYVALYGAAGSLAVKHLGSGSIDTLTSIETLNFDDT 330
Query: 350 CIDS----VNVKQR--SILEYTASYEDLIQVIGQDVFE 381
+ +++QR + A YE + D F
Sbjct: 331 VLGMSGLLAHLQQRFGPVQAGKAPYEMALNAAADDAFR 368
>gi|323139972|ref|ZP_08074990.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322394772|gb|EFX97355.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 984
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 31/224 (13%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLIN 454
D FDS Y+ +Y D+R A HY G EGRNP DAF + Y++++ED
Sbjct: 17 DSLFDSEHYIRTYPDVREA----NITAVEHYQNFGWIEGRNPSDAFNTIWYLSAYEDAAR 72
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN--VFGSDRGAAARHYIT 512
+ + L+ H++ FG + R + + D N + ++ A AR Y+
Sbjct: 73 SGLNP--LI-----HYARFGYRDSRPIAPGETVAGSWLADAANNELLPNEMRAFARSYVV 125
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
+PD ++ +Y DLI + ++ G+ + G +F+ Y
Sbjct: 126 IQNSSLFDPDFYRQ-QYDVKARDLIENY------IRQGRRERRDPG------PSFDASWY 172
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
L +YDD+ + G D H++ +G EGR G + S +
Sbjct: 173 LENYDDVRDN-GVD---PFIHFLEYGAAEGRITGPKAVAAHSTI 212
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 130/338 (38%), Gaps = 113/338 (33%)
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+LS ER RF D DS + Y +Y D + + +++H+ FG EGR+
Sbjct: 7 WLSKTERHRF-DSLFDSEH--------YIRTYPD----VREANITAVEHYQNFGWIEGRN 53
Query: 397 IT--FDSYLYLGSYDDLRNVFGSDRGAAAR-------HYITHGVKEGRN--PDAFKALEY 445
+ F++ YL +Y+D AAR HY G ++ R P A +
Sbjct: 54 PSDAFNTIWYLSAYED-----------AARSGLNPLIHYARFGYRDSRPIAPGETVAGSW 102
Query: 446 IA---SHEDLIN---AFADAPDLVQ----------------VGKDHFSNF---GCEEGR- 479
+A ++E L N AFA + ++Q +D N+ G E R
Sbjct: 103 LADAANNELLPNEMRAFARSYVVIQNSSLFDPDFYRQQYDVKARDLIENYIRQGRRERRD 162
Query: 480 -FVTFDSYLYLGSYDDLRNVFGSDRGAAA-RHYITHGVKEGR--NPDAFKALEYIASH-- 533
+FD+ YL +YDD+R D G H++ +G EGR P A A I
Sbjct: 163 PGPSFDASWYLENYDDVR-----DNGVDPFIHFLEYGAAEGRITGPKAVAAHSTIPEQSH 217
Query: 534 --------EDLINAFADAPDLVQAGKD----------HFSNFGYEEGRS----------I 565
E L+ F DA + KD HF+ G+ EGR +
Sbjct: 218 AALAPNELERLLEGF-DAGFYRRKNKDVDFSKISPLEHFATIGWREGRDPSADFSVKGYL 276
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+NPD+ L + H++ G++E R
Sbjct: 277 HYNPDVGLAGINPF------------LHFLIRGIEEKR 302
>gi|300864551|ref|ZP_07109414.1| hypothetical protein OSCI_950011 [Oscillatoria sp. PCC 6506]
gi|300337450|emb|CBN54562.1| hypothetical protein OSCI_950011 [Oscillatoria sp. PCC 6506]
Length = 328
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 22/185 (11%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRG---AAARHYITHGVKEGRNPDA--FKALEYIASHEDLI 453
FD YL Y +++ DRG + H+ G G + F Y+A + DL
Sbjct: 7 FDEQYYLSQYGFVKDAV--DRGLIGSGKEHFERFGQAAGLTKISRYFDEETYLAGNPDLT 64
Query: 454 ----NAFADAPDLVQVGKDHFSNFGCEEGRFVT-----FDSYLYLGSYDDLRNVFGSDRG 504
+AP G DHF FG EEG T ++ YL + +L +
Sbjct: 65 PFVRTVNPNAP--FASGLDHFIQFGYEEGARRTQVSPEYNEDFYLRNNSELLPFIQNGTF 122
Query: 505 AAA-RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG-YEEG 562
+ +H+I +GV+EGR +F EY+ + +L+ F ++ L + G+DH+ FG +E
Sbjct: 123 KSGYQHFIQYGVEEGRFGTSFFEPEYLEQNPNLV-PFINSGAL-KTGRDHYFQFGQFEVN 180
Query: 563 RSITF 567
RS TF
Sbjct: 181 RSATF 185
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRG---AAARHYITHGVKEGRNPDA--FKALEYIASHEDLI 537
FD YL Y +++ DRG + H+ G G + F Y+A + DL
Sbjct: 7 FDEQYYLSQYGFVKDAV--DRGLIGSGKEHFERFGQAAGLTKISRYFDEETYLAGNPDLT 64
Query: 538 ----NAFADAPDLVQAGKDHFSNFGYEEGRSIT-----FNPDLYLTSYDDLWNVFGSDR- 587
+AP +G DHF FGYEEG T +N D YL + +L +
Sbjct: 65 PFVRTVNPNAP--FASGLDHFIQFGYEEGARRTQVSPEYNEDFYLRNNSELLPFIQNGTF 122
Query: 588 SAAAQHYITHGMKEGR 603
+ QH+I +G++EGR
Sbjct: 123 KSGYQHFIQYGVEEGR 138
>gi|264678901|ref|YP_003278808.1| DMSO reductase [Comamonas testosteroni CNB-2]
gi|262209414|gb|ACY33512.1| putative DMSO reductase [Comamonas testosteroni CNB-2]
Length = 490
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 76/174 (43%), Gaps = 34/174 (19%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD YL +Y D++N G D A HY G +EGRNP+ F + Y+
Sbjct: 43 FDKDWYLSTYGDVKNA-GID---PAEHYYYQGGREGRNPNYLFNSAYYL----------E 88
Query: 458 DAPDLVQVGKD---HFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
D PD+ GK+ H+ FG EGR V FD Y + N + HYIT
Sbjct: 89 DNPDVAASGKNPLIHYIEFGENEGRSPSVYFDPAYYKAQLKEKING-----ESVLMHYIT 143
Query: 513 HGVKE-GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
G + G NP F Y+ ++D+ +A +D P L H+ G+ E R
Sbjct: 144 GGWRHYGPNP-FFDNRFYLDKYQDISDANSD-PLL------HYITHGWREAREF 189
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 63/159 (39%), Gaps = 52/159 (32%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD YL +Y D++N G D A HY G +EGRNP+ F + Y+
Sbjct: 43 FDKDWYLSTYGDVKNA-GID---PAEHYYYQGGREGRNPNYLFNSAYYLE---------- 88
Query: 542 DAPDLVQAGKD---HFSNFGYEEGRS--ITFNPDLYLTSYDDL--------------WNV 582
D PD+ +GK+ H+ FG EGRS + F+P Y + W
Sbjct: 89 DNPDVAASGKNPLIHYIEFGENEGRSPSVYFDPAYYKAQLKEKINGESVLMHYITGGWRH 148
Query: 583 FGSD------------------RSAAAQHYITHGMKEGR 603
+G + S HYITHG +E R
Sbjct: 149 YGPNPFFDNRFYLDKYQDISDANSDPLLHYITHGWREAR 187
>gi|159026636|emb|CAO86570.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 576
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+++G++GND + GN+A+N F +GND +G GLDT A + +++ N ++
Sbjct: 410 IENLIGTAGNDTITGNTADNSLFGEAGNDTINGGLGLDTLTGGAGNDFFRLDNVANRDLI 469
Query: 328 YD 329
D
Sbjct: 470 TD 471
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+++G++GND +IGN+ANN F +GND +G G D F
Sbjct: 113 IENLIGTAGNDTIIGNTANNSLFGEAGNDTINGGDGNDKLF 153
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IE+++G++GND +IGN+A+N F +GND +G G D F A
Sbjct: 311 IENLIGTAGNDTIIGNTADNSLFGEAGNDTINGGDGNDKLFGGA 354
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+++G++GND +IGN+ANN +GND +G G D F
Sbjct: 212 IENLIGTAGNDTIIGNTANNSLNGGAGNDSINGGDGNDKLF 252
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 16/102 (15%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------- 307
G N TI +T S+ G +GND + G N+ F +GND DG G DT
Sbjct: 316 GTAGNDTIIGNTADNSLFGEAGNDTINGGDGNDKLFGGAGNDWIDGGFGFDTIDGGLGND 375
Query: 308 -----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
FY+ P ++ + N D L +E L
Sbjct: 376 TTSYAFYWGPINA----NLSTGVVSFPGNSVFTDTLVSIENL 413
>gi|240950084|ref|ZP_04754384.1| calcium-binding domain-containing protein [Actinobacillus minor
NM305]
gi|240295433|gb|EER46192.1| calcium-binding domain-containing protein [Actinobacillus minor
NM305]
Length = 1762
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 73/311 (23%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSD----IKFISSNNGYVCTPRYDSRYFMEINFDKA 107
+ V R A S ++ F E+ I D + + S NG R I ++
Sbjct: 1276 KAVFRDAYAILSSYTNIQFVESKISGDRDTFVHYASMTNGSAAVARNGGH----ITWNAG 1331
Query: 108 DVWRYGIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT-SVMSY 165
W+ G GT L + ALHEI H LG++H + G P + +N Y N++ S++SY
Sbjct: 1332 SSWK---GWGTDYLYYTALHEIEHTLGMVHTNA--GDIPTFK-ENGYGNENTAEFSIISY 1385
Query: 166 FMPQDSMMDASFGYCATPMVS-DIVAVQKIYGA-PKGSLGNNIYKI-EVQQKDSPFIQTI 222
D ++ + + D+ + +G P G+++Y S + I
Sbjct: 1386 ----DRYVNDNLYLSLRDLRPYDLAYLHYRFGVNPNARAGDDVYSFANYNTYASDGGRYI 1441
Query: 223 YDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIG--------------------------- 254
+D G D D + GV Y++LN SWS +G
Sbjct: 1442 WDGNGVDTFDASKEKQGV--YVNLNPGSWSYVGEERERNFLVKNINSTQQDAHQYFDLPE 1499
Query: 255 --------GYEKNMTIA------------QHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G E+ + I+ Q T IE+++GS+ ND +IGN+A+N F +G
Sbjct: 1500 KAVIDSGNGKEEPLKISDVEYTSGQVYIGQGTQIENLIGSNHNDTLIGNAADNNIFGGAG 1559
Query: 295 NDVFDGSSGLD 305
ND +G +G D
Sbjct: 1560 NDKLEGGAGND 1570
>gi|167855642|ref|ZP_02478400.1| calcium binding domain protein [Haemophilus parasuis 29755]
gi|167853214|gb|EDS24470.1| calcium binding domain protein [Haemophilus parasuis 29755]
Length = 909
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 60/240 (25%)
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ ALHEIGH LG+ H S +G D E DS SVMSY + ++ +
Sbjct: 599 YTALHEIGHTLGMPHTDSTTE----FGKDYLIE-DSSEFSVMSY---NRYVNNSLYQKLH 650
Query: 182 TPMVSDIVAVQKIYGA-PKGSLGNNIYKI-EVQQKDSPFIQTIYDSGGDDLLDLTL-IGG 238
+ + D+ +Q +G K G+++Y + S + I+D G D D + G
Sbjct: 651 SLRMYDLAYLQNRFGVNAKSRAGDDVYTFADFNTYASDGGRYIWDGAGIDTFDASKEQAG 710
Query: 239 VKNYIDLNTESWSSIG-GYEKNMTI----------------------------------- 262
V Y++LN SW +G EKN I
Sbjct: 711 V--YVNLNPGSWIYVGETKEKNFLIKSVHSSKQDVKIYFGLPDKATVDSNGAVNAPLDIS 768
Query: 263 -----------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
Q T IE+++GS+ +D +IGN+A+N + +G+D G G DTF + A
Sbjct: 769 DVEYTKGQAYIGQGTQIENLLGSAHSDTLIGNAADNNIYGGAGDDTLIGGEGEDTFVFNA 828
>gi|158286645|ref|XP_001688107.1| AGAP006904-PA [Anopheles gambiae str. PEST]
gi|158286647|ref|XP_001688108.1| AGAP006904-PB [Anopheles gambiae str. PEST]
gi|158286649|ref|XP_308849.3| AGAP006904-PC [Anopheles gambiae str. PEST]
gi|157020567|gb|EDO64756.1| AGAP006904-PA [Anopheles gambiae str. PEST]
gi|157020568|gb|EDO64757.1| AGAP006904-PB [Anopheles gambiae str. PEST]
gi|157020569|gb|EAA04040.3| AGAP006904-PC [Anopheles gambiae str. PEST]
Length = 570
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 23/138 (16%)
Query: 37 THRLSFDITELNPNA--QEVARWALGEWSKVVDLTF---EETSIHSDIKFISSNNG---- 87
T+R+S L A +E+A+ A G WS+ DL F + ++H DI+F + +G
Sbjct: 124 TYRISKYPRRLERTAVDKEIAK-AFGVWSEYTDLRFTPKKTGAVHIDIRFEENEHGDGDP 182
Query: 88 -----YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--- 139
Y Y + +FD A+ W +GT L A HE GH+LGL H
Sbjct: 183 FDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQVAAHEFGHSLGLSHSDVRSA 242
Query: 140 -----YNGGYPVYGVDND 152
Y G PV+ +D+D
Sbjct: 243 LMAPFYRGYDPVFRLDSD 260
>gi|300864203|ref|ZP_07109087.1| hypothetical protein OSCI_740004 [Oscillatoria sp. PCC 6506]
gi|300337777|emb|CBN54233.1| hypothetical protein OSCI_740004 [Oscillatoria sp. PCC 6506]
Length = 541
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI GG+D+L +G N + ++ ++ G + N T+ + + G GND++
Sbjct: 72 TIIGLGGNDIL----LGNAGNDLLCGNQASDTLSGGQNNDTLIGGKASDILNGDIGNDIL 127
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G+ +++ +GND G G D F + I FEN + DF+
Sbjct: 128 LGDLGDDILTGGAGNDTLTGGDGSDIFVIAKSEGIDLITDFENGV----------DFIQL 177
Query: 341 VERLRFADQCIDSVNVKQRSILEYTA 366
L F D I + N Q + + A
Sbjct: 178 NPSLTFNDLAITTTNSGQVLVTDKIA 203
>gi|240141408|ref|YP_002965888.1| hypothetical protein MexAM1_META1p5007 [Methylobacterium extorquens
AM1]
gi|240011385|gb|ACS42611.1| hypothetical protein MexAM1_META1p5007 [Methylobacterium extorquens
AM1]
Length = 817
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 34/198 (17%)
Query: 126 HEIGHALGLMH-PGSYNG-GYPVYGVDNDYE---NDSFLTSVMSYFMPQDSMMDASFGYC 180
HEIGH LG + P + G ++ +N L ++ + +MD G+
Sbjct: 128 HEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPVVLDGARAHVWGSEDLMDPYLGWG 187
Query: 181 ATPMVSDI-VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS----GGDDLLDL-- 233
+SD+ +A+ + G P I ++ D ++ D+ GGDD +D
Sbjct: 188 QRSYISDLDLAMLQDKGMP----------ISTERADKMWLGNRADTFFAYGGDDWIDGGW 237
Query: 234 ---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L GGV N ++ G + N + ++++G GND + G N+
Sbjct: 238 GDDKLFGGVGN---------DTLIGGDGNDALDGGVGNDTLIGGDGNDALDGGVGNDTLI 288
Query: 291 ESSGNDVFDGSSGLDTFF 308
GND DG +G DT
Sbjct: 289 GGDGNDALDGGAGDDTLI 306
>gi|329850545|ref|ZP_08265390.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840860|gb|EGF90431.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1439
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 141/364 (38%), Gaps = 111/364 (30%)
Query: 31 KPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNN 86
P +T H ++F N Q R LG+ + L+F E ++ H+ ++F +++
Sbjct: 56 SPGFVTNH-IAF-----NAMQQTAVRLLLGQVAGFTLLSFTEITETSNTHAVLRFSQTSD 109
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGT-ILSHNA-----------LHEIGHALGL 134
V P + R F + DVW +G T L++ LHE GH +GL
Sbjct: 110 SGV--PTAEGR-FPGPDVGDGDVW---VGTSTDQLAYTVPQSGNWGMDMLLHETGHTMGL 163
Query: 135 MH--------------------PGSYNGGYPVYGVDN-DYENDSFLTSVMSY-------- 165
H PG P YG ++DS SVM+Y
Sbjct: 164 KHGHSDYTDFDLTIDGHVSTFMPG------PRYGTQALPTDHDSSAYSVMTYRSDPGNVM 217
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD--------- 215
PQ S+ D T M +DI A+Q +YGA + +++Y + +
Sbjct: 218 MTPQSSLYD----MAQTYMQNDIAALQYLYGANFNVNATDSVYTFDTSTGEMFINGVGQG 273
Query: 216 ---------SPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWS--------SIGGYE 257
+TI+D GG+D +L+ +N +DLN W+ + G +
Sbjct: 274 IPTRPDGDVGKIFRTIWDGGGNDTYNLS--NSFRNQTVDLNPGGWTIFNDRQLADLRGGD 331
Query: 258 KNMTIA--------------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++T+ ++IE+V +G+D + GN+A N G+D+ G G
Sbjct: 332 PDVTVNAPGNFANARLYNFDTRSLIENVTTGAGHDTIYGNTARNHIQAGGGDDLVYGGDG 391
Query: 304 LDTF 307
DT
Sbjct: 392 WDTL 395
>gi|330890709|gb|EGH23370.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 1526
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +++ T +++ G GND++ G S N+V S+GNDV DG +G D A
Sbjct: 212 TLNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGSGNDVLNGSAGNDVLDGGAGNDRLDGGA 271
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+Y + ++Y ANE + + ++ + +N SI A Y+ +
Sbjct: 272 GDDIYLFGKGSGQDVIYYANEARTGKVDTIQLV--------GLNAGDISISR--AGYDLV 321
Query: 372 IQVIGQDVFESMKHFYEF 389
++V G +S++ Y F
Sbjct: 322 LRVNG--TTDSLRVVYHF 337
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N T+ + +++ G GND++ G + N++ +GNDV DG +G D A
Sbjct: 776 TINGAAGNDTLIGGSGADTLSGEEGNDLLQGGAGNDILNGGAGNDVLDGGAGNDRLDGGA 835
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + +Y ANE + V++++ +N S++ Y+ +
Sbjct: 836 GDDTYLFGKGSGQDTIYYANETRA---GKVDQVKLV-----GLNAADVSVVR--EGYDLV 885
Query: 372 IQVIG-QDVFESMKHF 386
I++ G D M HF
Sbjct: 886 IRINGTTDTLRVMYHF 901
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G S N+V +GND DG +G DT+ + S IY ANE
Sbjct: 988 GGAGNDSLAGGSGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYY---------ANE 1038
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHF 386
+ V++++ D V+V + Y+ +I+++G D + HF
Sbjct: 1039 SRA---GKVDQVKLVDLNAADVSVARD-------GYDLVIRILGTTDTLRVVYHF 1083
>gi|182676844|ref|YP_001830991.1| proprotein convertase P [Beijerinckia indica subsp. indica ATCC 9039]
gi|182636474|gb|ACB97247.1| Proprotein convertase P [Beijerinckia indica subsp. indica ATCC 9039]
Length = 2911
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
Query: 227 GDDLLDL-----TLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHTV---------IESV 271
G+DL+D TLIGG ID T + ++ G +T AQ+T E++
Sbjct: 2719 GNDLIDGGLGNDTLIGGTG--IDTVTYTSATSGVTVSLALTTAQNTGGAGTDTLSGFENL 2776
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
GS+ NDV+ G++ NNV +GND+ GS+G DT A + +Y ++ + ++++DA
Sbjct: 2777 TGSAYNDVLTGDAGNNVINGGAGNDILVGSAGSDTLDGGAGNDVYIYHQADGNMLIHDAG 2836
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + L FAD + S L ++ S DL+
Sbjct: 2837 DSSGP--TPFNTLSFADLTL--------SNLLFSQSGTDLV 2867
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
E++ GS+ NDV+ G+S NNV GND DG +G+DT Y + +
Sbjct: 2525 ENLTGSAYNDVLTGDSGNNVIDGGLGNDTLDGGAGVDTVTYVSAT 2569
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
E++ GS+ NDV+ GN NNV +GND DG G DT A
Sbjct: 2107 ENLTGSAYNDVLTGNGGNNVIDGGAGNDTIDGGPGNDTLIGGA 2149
>gi|242334910|emb|CAB08559.4| C. elegans protein H36L18.1, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 420
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 53/233 (22%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ R+ + + YW I Y+ + R+S L+ AR A W + L
Sbjct: 25 SKSRVKRYSIEGSYWGKSVITYRLKQ-PSQRMS-----LSQQKAVFAR-AFATWEEHTRL 77
Query: 69 TF------EETSIHSDIKFISSNN---------GYVCTPRYDSRYFMEINFDKADVWRYG 113
F +E + DI F + ++ G + + RY +++FD+ ++W
Sbjct: 78 WFVAVDDEDEQKANIDIVFAAGDHEDGEPFDGKGNILAHAFFPRYGGDVHFDEDELWSAN 137
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
KG L A+HEIGH+LGL H ++ S+M+ F Q +
Sbjct: 138 KTKGVDLYAVAVHEIGHSLGLKHSSNH-------------------LSIMAPFYKQYT-- 176
Query: 174 DASFGYCATPMVSDIVAVQKIYGAP----KGSLGNNIYKIEVQQKDSPFIQTI 222
G DI AV+++YGAP K + ++I++ E+ K P++ +
Sbjct: 177 ----GAVMHLHQDDISAVKRLYGAPVKIRKKASEHHIWRSELCTK--PYLDAV 223
>gi|4505213|ref|NP_002420.1| matrix metalloproteinase-19 isoform rasi-1 preproprotein [Homo
sapiens]
gi|12643345|sp|Q99542|MMP19_HUMAN RecName: Full=Matrix metalloproteinase-19; Short=MMP-19; AltName:
Full=Matrix metalloproteinase RASI; AltName: Full=Matrix
metalloproteinase-18; Short=MMP-18; Flags: Precursor
gi|1731986|emb|CAA63299.1| MMP-19 (matrix metalloproteinase) [Homo sapiens]
gi|2228244|gb|AAB63008.1| matrix metalloproteinase RASI-1 [Homo sapiens]
gi|2253587|gb|AAC51521.1| matrix metalloproteinase RASI-1 [Homo sapiens]
gi|29791916|gb|AAH50368.1| Matrix metallopeptidase 19 [Homo sapiens]
gi|51234137|gb|AAT97983.1| matrix metalloproteinase 19 [Homo sapiens]
gi|312153168|gb|ADQ33096.1| matrix metallopeptidase 19 [synthetic construct]
Length = 508
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIK--FISSN 85
R++ LT L+ T A+ R A +WS V LTF+E +DI+ F
Sbjct: 103 RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHGRQ 162
Query: 86 NGYVCTPRYDSR----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ Y C+ +D ++FD+ + W G +G L A HE+GHALGL
Sbjct: 163 SSY-CSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLG 221
Query: 136 H 136
H
Sbjct: 222 H 222
>gi|1702930|emb|CAA69913.1| matrix metalloproteinase [Homo sapiens]
Length = 508
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIK--FISSN 85
R++ LT L+ T A+ R A +WS V LTF+E +DI+ F
Sbjct: 103 RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHGRQ 162
Query: 86 NGYVCTPRYDSR----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ Y C+ +D ++FD+ + W G +G L A HE+GHALGL
Sbjct: 163 SSY-CSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLG 221
Query: 136 H 136
H
Sbjct: 222 H 222
>gi|126657191|ref|ZP_01728357.1| hypothetical protein CY0110_24721 [Cyanothece sp. CCY0110]
gi|126621462|gb|EAZ92173.1| hypothetical protein CY0110_24721 [Cyanothece sp. CCY0110]
Length = 1137
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 28/122 (22%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HE+GHALGL H S G P+ E D+ SVM+Y +S AT M
Sbjct: 203 VHELGHALGLSHTHS---GTPLSS-----ELDNTDNSVMTYNFTGNS--------AATFM 246
Query: 185 VSDIVAVQKIYGAPKGSLGNNIY------------KIEVQQKDSPFIQTIYDSGGDDLLD 232
DI A+Q +YGA + G+ Y I + + + QT++DS G D LD
Sbjct: 247 PLDIAALQHLYGAKSHNAGDTTYVFGNYIDQVSVNGISLVETSNRTKQTLWDSDGIDTLD 306
Query: 233 LT 234
+
Sbjct: 307 FS 308
>gi|329851021|ref|ZP_08265778.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
gi|328839867|gb|EGF89439.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
Length = 4917
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-----IESVVGSSGNDVVIGNSANNVF 289
LIGG N + S GG +T +T+ +S+ G S D++ G + ++
Sbjct: 1426 LIGGDGNDTLVGHSGNSGEGGVSSAITTLPNTLEGGEGNDSITGGSHEDIITGGAGDDTM 1485
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD---ANEHKQDFLSDVERLRF 346
+GND DG +G D + + R + + + D A E + ++ VE LRF
Sbjct: 1486 VTDTGNDTVDGGAGNDIAVISGNRADFTLERVGDTVTLVDLRNAYEGETKIITGVETLRF 1545
Query: 347 ADQC----IDSVN-VKQRSILEYTASYEDLIQVIGQD 378
DQ I+++N + + TA+ E ++ + G D
Sbjct: 1546 DDQDVTNEIETINGTEDGETIAGTAAGEIILALGGND 1582
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 14/131 (10%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNV---------FFESSGNDVFDGSSGLDTFFYYAP 312
I+ + +++ G GND V S N+ S GND G G DT Y P
Sbjct: 3930 ISAGSGNDTLSGGLGNDTVSAGSGNDDVTGGDGGDVLTGSFGNDTLSGGDGTDTAVYAGP 3989
Query: 313 SYLYKIYRFENA--IIV---YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y I E IIV + + D S VE L+FADQ ID I++ +A
Sbjct: 3990 RDQYTIVSDEAGGYIIVDNFPENGDEGTDHFSGVEYLQFADQLIDVTASNFGIIIDGSAI 4049
Query: 368 YEDLIQVIGQD 378
+D G D
Sbjct: 4050 ADDKTGTSGND 4060
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G G+D + GN+ N+ F+ GND G G+D + Y I IIV
Sbjct: 3305 DTIHGGGGDDRMFGNAGNDAFYAEGGNDKIYGGGGVDVAHFSGNRNDYTIVEDGGVIIVT 3364
Query: 329 D---ANEHKQDFLSDVERLRFAD 348
D QD L V L FAD
Sbjct: 3365 DNRGGTPEGQDTLYGVYTLVFAD 3387
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLD 305
G N T++ ++ S+ G +GND+V G N+ GNDV DG G D
Sbjct: 2308 GDAGNDTLSDNSGSNSLSGGAGNDLVSGGDDNDTLSGGVDDDTLTGGLGNDVIDGGDGTD 2367
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEH---KQDFLSDVERLRFADQ 349
LY + R + A Y N D L+ VE +RFAD
Sbjct: 2368 VTGLSGNRALYSVIR-DGAGGYYAVNNRGTDGSDHLTAVEIVRFADS 2413
>gi|321469983|gb|EFX80961.1| hypothetical protein DAPPUDRAFT_303785 [Daphnia pulex]
Length = 559
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 38/176 (21%)
Query: 39 RLSFDITELNPNA-------QEVARWALGEWSKVVDLTF---EETSIHSDIKFISSN--- 85
+L++ IT+ P+A +E+A+ A W V +LTF +H +I+F S
Sbjct: 87 QLTYSITKY-PSALKTTDVDRELAK-AFQVWEDVTELTFVHLRTGKVHIEIRFESGEHGD 144
Query: 86 ------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
G Y Y + +FD+++ W KGT L A HE GH+LGL H
Sbjct: 145 GDAFDGTGGTLAHAYFPIYGGDAHFDESETWTINSYKGTNLFQVAAHEFGHSLGLSHSDV 204
Query: 140 --------YNGGYPVYGVDN-DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
Y G P + +DN D +N + T S +P G TP V+
Sbjct: 205 RSALMAPFYRGYEPSFKLDNDDSQNVATTTETSSRPLPP--------GRATTPRVT 252
>gi|296283200|ref|ZP_06861198.1| VCBS [Citromicrobium bathyomarinum JL354]
Length = 1533
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 167 MPQDS--MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
MP S M+ S P +S A +YG G+++Y EV ++ Y
Sbjct: 848 MPAGSSYTMNVSLTGATIPSLS---AAATVYGG----TGDDVY--EVAGAGDLLVE--YA 896
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG D T++ V + N E+ + + G + A + + + G++ ++V+ G +
Sbjct: 897 GGGTD----TVLSRVSYTLGANIENLTLVSG-SGAVEAAGNDLDNLLRGNAADNVIRGGA 951
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+++ S GND DG +G DT + Y I+ N + + D L VERL
Sbjct: 952 GDDILVGSGGNDAIDGGAGTDTAVFSGNRSDYTIFNIANGQVQQISGPDGVDTLFSVERL 1011
Query: 345 RFAD 348
F D
Sbjct: 1012 AFDD 1015
>gi|221134349|ref|ZP_03560654.1| Hemolysin-type calcium-binding region [Glaciecola sp. HTCC2999]
Length = 10022
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 93/253 (36%), Gaps = 41/253 (16%)
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
D D G+G +I + I LG S GG +D + DS +
Sbjct: 8336 DGDDTLDGGVGNDSIGGDDGADSI---LGNSGDDSIKGGTGADFIDGGNDQDSIFGGDDA 8392
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-----KGSLGNNIYKIEVQQKDSPFI 219
+ S D FG +S +YG GS GNN +
Sbjct: 8393 DTINGGSGNDTVFGDAGDDSISAGAGNDTVYGGAGDDEIAGSSGNNYLA------GGEGV 8446
Query: 220 QTIYDSGGDDLLDLTLIGGVKN----------YIDLNTESWSSI----GGYEKNMTIA-- 263
TI G D T+ GG N ID+ +ES SS+ G +T++
Sbjct: 8447 DTIVGGSGSD----TIAGGTGNDSLNGGSGIDVIDM-SESTSSLNIVLGNANDTITLSDD 8501
Query: 264 -----QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
Q T E ++G ND++ GN++NN+ GND DG +G+DT + ++
Sbjct: 8502 VLGDDQVTGFEGIIGGQANDIITGNASNNIIGGGLGNDTLDGGAGIDTLDLSNANQTVEV 8561
Query: 319 -YRFENAIIVYDA 330
A+ + D
Sbjct: 8562 DLNVTGAVTIADG 8574
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+V+GSS ND + G+ A + SGND F G++G DT S +E +I+
Sbjct: 9292 ETVIGSSANDTIKGSEAADELNGQSGNDYFYGTAGNDTIIGGLGSDTIDYSAYEGNLIID 9351
Query: 329 DANE------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
AN+ + D L +E +RFA DS+ + + Y D + +
Sbjct: 9352 LANQTVVKDNGEVDTLVGIEFVRFAGAGDDSIVGSNSNEVIYAGQGNDTVDL 9403
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T+ GG N ++ G + +++ T +SV G G+D V G + N+ +
Sbjct: 1970 TVTGGAGNDTTTGGAGNDTVSGEAGDDSVSGGTGDDSVDGGEGDDSVDGGAGNDTVNGGA 2029
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
GND DG G D+ + N I+YDAN+ D + + L D +D
Sbjct: 2030 GNDSIDGGEGADSIAAGSG----------NDTIIYDANDVLIDGQAGTDTLLIQDSEVD 2078
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 257 EKNMTIAQHTVIESVVGSSGND---------VVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + + Q + IE+V G +GND VV+G + N+V + G D DG +G DTF
Sbjct: 2924 QADTEVDQLSSIENVTGGAGNDTIYGSDEANVVVGGAGNDVITANGGADTIDGGAGSDTF 2983
Query: 308 F 308
Sbjct: 2984 I 2984
>gi|332206790|ref|XP_003252478.1| PREDICTED: matrix metalloproteinase-19 [Nomascus leucogenys]
Length = 503
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIK--FISSN 85
R++ LT L+ T + A+ R A +WS V LTF E +DI+ F
Sbjct: 103 RWRKKHLTFRILNLPSTLPSHTARTALRQAFEDWSNVAPLTFREVQAGTADIRLSFHGRQ 162
Query: 86 NGYVCTPRYDSR----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ Y C+ +D ++FD+ + W G +G L A HE+GHALGL
Sbjct: 163 SSY-CSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLG 221
Query: 136 H 136
H
Sbjct: 222 H 222
>gi|301627877|ref|XP_002943093.1| PREDICTED: matrix metalloproteinase-17, partial [Xenopus (Silurana)
tropicalis]
Length = 518
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 35 LTTHRLSFDITELNPN--AQEVARW----ALGEWSKVVDLTFEETSIHSDIK--FISSNN 86
L T RL E +PN +Q+V+R AL WSK L F ET DI+ F++ ++
Sbjct: 87 LLTWRL-----ENSPNTMSQDVSRTLIGTALAVWSKETQLQFRETREQPDIRVEFVTGSH 141
Query: 87 G-------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
G + P R E + D + W Y +GT L A+HE GH+LG
Sbjct: 142 GDGYPFDGQGGTLGHAFFPGVGERA-GETHMDADESWSYNTEEGTDLFAVAVHEFGHSLG 200
Query: 134 LMHPGSYN 141
L H S N
Sbjct: 201 LYHSSSEN 208
>gi|75909848|ref|YP_324144.1| Na-Ca exchanger/integrin-beta4 [Anabaena variabilis ATCC 29413]
gi|75703573|gb|ABA23249.1| Na-Ca exchanger/integrin-beta4 [Anabaena variabilis ATCC 29413]
Length = 1180
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---------YYAPSYLYKIY 319
+ + G GND + G + N+V F G+D F+G +G DTF+ Y Y++
Sbjct: 569 DQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGAGNDTFYGGAGNDIAVYSGTRSQYQVT 628
Query: 320 RFENAIIVYD--ANEHKQDFLSDVERLRFADQCI 351
V D AN D L +VE+++F+DQ I
Sbjct: 629 SSGGVFTVTDTVANRDGVDTLREVEQIQFSDQTI 662
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYE 257
G GN+ Y T +GG D +D + G V+ ++L + ++
Sbjct: 947 SGGAGNDTYAFVANAALGTDTITETATGGIDTIDFSGSTGAVR--VNLGVTTSQTVNSNL 1004
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
K + ++ + VIE+ G +GND + GN+ NN+ +GND G +G DT +
Sbjct: 1005 K-LILSANNVIENATGGTGNDRLTGNALNNILAGGNGNDQLQGLAGNDTLW 1054
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI + + G GND + G + N+V F G+D F+G G DTF+ A + ++ +
Sbjct: 418 NQTIEGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYSGAGNDVFNL 477
Query: 319 YRFENAIIVYD 329
+ ++ +V D
Sbjct: 478 EQLQDNDVVID 488
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI + + G GND + G + N+V F G+D F+G G DTF+ A + ++ +
Sbjct: 140 NQTIEGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYGGAGNDVFNL 199
Query: 319 YRFENAIIVYD 329
+ ++ +V D
Sbjct: 200 EQLQDNDVVID 210
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI + + G GND + G + N+V F G+D F+G G DTF+ A + ++ +
Sbjct: 279 NQTIDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYGGAGNDVFNL 338
Query: 319 YRFENAIIVYD 329
+ ++ +V D
Sbjct: 339 EQLQDNDVVID 349
>gi|323135550|ref|ZP_08070633.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322398641|gb|EFY01160.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 906
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 86/222 (38%), Gaps = 47/222 (21%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y+ +Y D+ A HY G + GR+P A F EY+ ++ D+ A A
Sbjct: 26 FDAQFYVSAYPDV----ADSSIDPAEHYFVVGWRHGRDPCAWFSTEEYLKANGDV--AEA 79
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
D H+ G EEGR V + + RG AA H + G +
Sbjct: 80 DVNPFY-----HYLTHGREEGRVV-------------VASRLSDSRGGAASH--SAGTES 119
Query: 518 GRNPD---AFKALEYIASHEDLINAFADA-------PDLVQAGKD----HFSNFGYEEGR 563
R P + + +A ++ D PDL D HF+ G+ E R
Sbjct: 120 SRRPPEGAPGMSEDVLAQQRSVVAGAFDTNFYRSTYPDLHPLNDDQLVDHFNEHGWREHR 179
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+ + YL Y D+ G HY+ +G +EGR
Sbjct: 180 DPCPWFSTNYYLKRYPDI----GRSSINPLYHYLAYGQREGR 217
>gi|110678852|ref|YP_681859.1| iron-regulated protein FrpC, putative [Roseobacter denitrificans
OCh 114]
gi|109454968|gb|ABG31173.1| iron-regulated protein FrpC, putative [Roseobacter denitrificans
OCh 114]
Length = 1138
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+D G G D +D T + + IDL+ W+ G + N + +E+V+ S G+DVV
Sbjct: 581 FDGGAGTDTVDFTGVN-LDTTIDLDAGIWNFTG-FAPNFDMID---VENVILSGGDDVVT 635
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G+SA NV GND DG +G DT F A + F A V+ + S
Sbjct: 636 GSSAANVITTGGGNDTIDGGAGDDTIFAGAGNDTVFNANFSGANTVF-GGDGDDTITSSG 694
Query: 342 ERLRFADQCIDSV 354
E F + D++
Sbjct: 695 EDTVFGEAGDDTI 707
>gi|104779436|ref|YP_605934.1| surface adhesion protein [Pseudomonas entomophila L48]
gi|95108423|emb|CAK13117.1| Surface adhesion protein [Pseudomonas entomophila L48]
Length = 5862
Score = 45.4 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL+GG N I I G + N + T ++++G GND++ G + N++
Sbjct: 5686 TLLGGNGNDIIFGQGGNDYIDGGKGNDILLGGTGNDTLLGGEGNDLLFGGAGNDLLIGGK 5745
Query: 294 GNDVFDGSSGLDTFFYYA 311
GND+ G +G DTF + A
Sbjct: 5746 GNDIMTGGTGADTFVWKA 5763
>gi|17230838|ref|NP_487386.1| hypothetical protein all3346 [Nostoc sp. PCC 7120]
gi|17132441|dbj|BAB75045.1| all3346 [Nostoc sp. PCC 7120]
Length = 1428
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---------Y 309
N TI + + G GND + G N+V F G+D F+G +G DTF+ Y
Sbjct: 688 NQTIDGTNSPDQLFGGLGNDTLRGFFGNDVLFGEQGDDRFEGGAGNDTFYGGTGNDIAVY 747
Query: 310 YAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCI 351
Y++ V D AN D L +VE+++F+DQ I
Sbjct: 748 LGTRSQYQVTSNGGVFTVTDTVANRDGVDTLREVEQIQFSDQTI 791
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ ++ + VIE+ G +GND + GN+ NN+ +GND G +G DT +
Sbjct: 1254 LILSANNVIENATGGTGNDRLTGNALNNILAGGNGNDQLQGLAGNDTLW 1302
>gi|209966566|ref|YP_002299481.1| integrins alpha chain, putative [Rhodospirillum centenum SW]
gi|209960032|gb|ACJ00669.1| integrins alpha chain, putative [Rhodospirillum centenum SW]
Length = 630
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN- 331
G G D++ G + ++F G+D DG G D ++ ++ YR E + V D +
Sbjct: 54 GGRGQDLLAGGAGYDLFLGGIGDDTLDGGEGWDKAYWDGEFREFEFYRVEGWLYVVDTSS 113
Query: 332 ---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ D L +E+LRF D +D +Q + L A
Sbjct: 114 RFTDEGTDRLRGIEQLRFRDFGLDLTRTRQVADLSGDAG 152
>gi|4096734|gb|AAC99995.1| matrix metalloproteinase RASI-1 [Homo sapiens]
Length = 308
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIK--FISSN 85
R++ LT L+ T A+ R A +WS V LTF+E +DI+ F
Sbjct: 24 RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHGRQ 83
Query: 86 NGYVCTPRYDSR----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ Y C+ +D ++FD+ + W G +G L A HE+GHALGL
Sbjct: 84 SSY-CSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLG 142
Query: 136 H 136
H
Sbjct: 143 H 143
>gi|332706922|ref|ZP_08426982.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332354187|gb|EGJ33667.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 159
Score = 45.4 bits (106), Expect = 0.034, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
PF Q I+ + D L +G N + L E I G E N + + G G
Sbjct: 78 PF-QLIFGTPNPDFL----LGTSNNDLILGLEGDDIIIGLEGN---------DLLFGQEG 123
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
ND++IG S N+ F SGNDV G SG D F
Sbjct: 124 NDILIGGSGNDFLFGGSGNDVLSGDSGHDCLF 155
>gi|209522962|ref|ZP_03271519.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209496549|gb|EDZ96847.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 1252
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
P +I G+D++D GG N L E SI G N +I + I S+ G
Sbjct: 849 GPGNDSIVGGSGNDVID----GGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFGEG 904
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D +IG + N+ GND G +G DT F + + R +N + D N+
Sbjct: 905 GDDTIIGGNDGNLLSGGDGNDSLTGGTGNDTIFGGDGNDTIRTERGDNQLFGDDGND 961
>gi|71736991|ref|YP_273097.1| calcium binding hemolysin protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557544|gb|AAZ36755.1| calcium binding hemolysin protein, putative [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 5107
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T++ + + G +GND++ G ++N+ + GNDV DG +G D
Sbjct: 4741 TVNGGSGNDTLSGGAGADMLNGDAGNDLLQGGASNDTLYGGDGNDVLDGGAGNDQLNGGD 4800
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + +Y ANE + + ++ ++ AD +NV SI ++ L
Sbjct: 4801 GDDTYLFGKGAGQDTIYYANEAR---VGKLDTVKLAD-----LNVSDVSITRDSSDL--L 4850
Query: 372 IQVIG-QDVFESMKHFYE 388
I+V G D M HF E
Sbjct: 4851 IRVNGTTDNLRVMNHFAE 4868
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +++ T +++ G GND++ G S N+V +GNDV DG +G D A
Sbjct: 3267 TLNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGSGNDVLNGGAGNDVLDGGAGNDRLDGGA 3326
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+Y + ++Y ANE + + ++ + +N SI A Y+ +
Sbjct: 3327 GDDIYLFGKGSGQDVIYYANEARTGKVDTIQLV--------GLNAGDISISR--AGYDLV 3376
Query: 372 IQVIGQDVFESMKHFYEF 389
++V G +S++ Y F
Sbjct: 3377 LRVNG--TTDSLRVVYHF 3392
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N T+ + +++ G GND++ G + N++ +GNDV DG +G D A
Sbjct: 3831 TINGAAGNDTLIGGSGADTLSGEEGNDLLQGGAGNDILNGGAGNDVLDGGAGNDRLDGGA 3890
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + +Y ANE + V++++ +N S++ Y+ +
Sbjct: 3891 GDDTYLFGKGSGQDTIYYANETRA---GKVDQVKLV-----GLNAADVSVVR--EGYDLV 3940
Query: 372 IQVIG-QDVFESMKHF 386
I++ G D M HF
Sbjct: 3941 IRINGTTDTLRVMYHF 3956
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIVY 328
+ G GND ++GN+ N+ + SGND DG +G D S +Y+ R +++I Y
Sbjct: 731 LAGGEGNDTLLGNADNDTLYGDSGNDELDGGAGNDYLTGGDGSDVYRFSRGWGQDSISNY 790
Query: 329 DANEHKQDFL 338
D++ K D +
Sbjct: 791 DSSAEKTDAI 800
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND++ GN+ +++ + + GND+ DG +G DT S IYRF A
Sbjct: 1134 GEEGNDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGS---DIYRF--------AKG 1182
Query: 333 HKQDFLSDVERLRFADQCIDSVNVK--QRSILEYTASYEDLIQVIGQ--DVFESMKHFYE 388
+ QD +++ A +D++ + + L + S +DL+ I D HF +
Sbjct: 1183 YGQDSINNNSYGETATDKVDAIQLDGLNSADLRFYRSSDDLVIQIKATGDTLTVRSHFSQ 1242
Query: 389 FGLS 392
G++
Sbjct: 1243 DGVT 1246
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIVY 328
+ G GND ++G++ N+ + SGND+ +G +G D S +Y+ R +++I Y
Sbjct: 931 LTGGDGNDTLLGDAGNDTLYGDSGNDLLEGGTGNDYLIGGEGSDVYRFNRGWGQDSINNY 990
Query: 329 DANEHKQDFL 338
D++ K D +
Sbjct: 991 DSSAGKTDAI 1000
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G S N+V +GND DG +G DT+ + S IY ANE
Sbjct: 4043 GGAGNDSLAGGSGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYY---------ANE 4093
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHF 386
+ V++++ D V+V + Y+ +I+++G D + HF
Sbjct: 4094 SRA---GKVDQVKLVDLNAADVSVARD-------GYDLVIRILGTTDTLRVVYHF 4138
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 12/137 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N T+ + +++ G GNDV++G + N+ GND DG +G D
Sbjct: 4560 INGAAGNDTLTGNAGADTLNGGEGNDVLLGGAGNDSLSGGVGNDSLDGGAGNDQLDGGEG 4619
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y + +Y A E+++ L + ++ D V+V++ + +I
Sbjct: 4620 DDTYLFGKGAGQDTIYYAYENREGKL---DTIKLTDLNASDVSVRRD-------GNDLII 4669
Query: 373 QVIGQDVFESMKHFYEF 389
+V+G +S++ Y F
Sbjct: 4670 RVLGS--TDSLRVVYHF 4684
>gi|47220689|emb|CAG11758.1| unnamed protein product [Tetraodon nigroviridis]
Length = 439
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 40 LSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEETSI-HSDIKFISSNNGYVCTPR 93
L++ I +P+ + R A WS V DLTF E +DI+ C
Sbjct: 83 LTYRIYNYSPDMRRADIGAAVRAAFRYWSDVADLTFREIPYGRADIRLAFHKRDGFCP-- 140
Query: 94 YDSRYFM----------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D R + ++FD ++W G +GT L A HEIGHALGL H
Sbjct: 141 FDGRGHVLAHAEPPESGVVHFDDDELWTEGSYRGTNLRIVAAHEIGHALGLGH 193
>gi|163794873|ref|ZP_02188842.1| calcium binding hemolysin protein, putative [alpha proteobacterium
BAL199]
gi|159179692|gb|EDP64219.1| calcium binding hemolysin protein, putative [alpha proteobacterium
BAL199]
Length = 690
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I T +S+VG+ G+D + G++ N+V + +G+DV DG +G DT + + L+ + R
Sbjct: 362 IIGGTGADSLVGNGGDDTLQGDAGNDVLYGGAGDDVLDGGAGADTLYGGEGNDLF-VIRV 420
Query: 322 ENA 324
EN
Sbjct: 421 ENG 423
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 216 SPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+P+ T+ + GDD +D + GG+ N + + E ++ G N T+ T ++
Sbjct: 517 TPYNDTLTGTPGDDTIDALAGDDVVFGGLGNDVLIGGEGNDALSGSYGNDTLVGGTGDDT 576
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ GS +D + G N++ SGND G +G DT
Sbjct: 577 LFGSLDDDQISGGDGNDLLIGGSGNDTLSGGAGDDTLL 614
>gi|83582760|ref|YP_425066.1| hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
gi|83578076|gb|ABC24626.1| Hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
Length = 462
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y Y D+ + + Q S +HF +G++EGR+ FD+ YL D+ +V +
Sbjct: 14 YLRVYSDVAEAVKQGAISSGYEHFLRYGMAEGRNPNRFFDTAYYLNQNPDVASVVKTGSI 73
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A H++ +G E R+P AF +++ ++ + + +L G HF G +E R
Sbjct: 74 TAYSHFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGELTAYG--HFFANGADELRQ 131
Query: 481 VT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
T F Y+ + D+ + + RH+ G+ E R+
Sbjct: 132 ATPFFSPLDYMAANPDVTS-------SPLRHFAEFGIAENRD 166
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 28/177 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAA---RHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
F+ YL Y D+ +GA + H++ +G+ EGRNP+ F Y +N
Sbjct: 9 FNEEFYLRVYSDVAEAV--KQGAISSGYEHFLRYGMAEGRNPNRFFDTAY------YLNQ 60
Query: 456 FADAPDLVQVGK----DHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARH 509
D +V+ G HF + G E R T FD YL + +D+ A H
Sbjct: 61 NPDVASVVKTGSITAYSHFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGELTAYGH 120
Query: 510 YITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ +G E R F L+Y+A++ PD+ + HF+ FG E R +
Sbjct: 121 FFANGADELRQATPFFSPLDYMAAN----------PDVTSSPLRHFAEFGIAENRDL 167
>gi|329851779|ref|ZP_08266460.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328839628|gb|EGF89201.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1701
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + L + S + + +T A TVIE VG SG+DV++GNSA N +GND
Sbjct: 1310 GRGTTVTLTSNSSNVVAAITGGLTEATRTVIEDAVGGSGDDVLLGNSAANGLTGGNGNDD 1369
Query: 298 FDGSSGLDTFF 308
G +G D
Sbjct: 1370 LSGRAGDDQLL 1380
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 9/151 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N T+ + +++ G +G+D + G S +V +GND DG +G DT Y +
Sbjct: 1498 GGEGNDTLDGGSGNDTMAGGTGDDALTGGSGGDVLIGDAGNDALDGGTGTDTVDYGLATA 1557
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDL 371
+ + D L +E L F D I S +IL ++ +
Sbjct: 1558 GVSV-SLSMPGLAQVTGGAGTDTLVSIENLTGSEFDDFLIGS---SGSNILMGGGGHDQI 1613
Query: 372 IQVIGQDVFESMKHF--YEFGLSEGRDITFD 400
+ G D + FGL+ G D D
Sbjct: 1614 VGRGGNDGLTGGAGADDFVFGLASGADRVMD 1644
>gi|257094797|ref|YP_003168438.1| peptidase S8/S53 subtilisin kexin sedolisin [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047321|gb|ACV36509.1| peptidase S8 and S53 subtilisin kexin sedolisin [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 1388
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 203 GNNIY----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ Y K V P + + D GG D ++ I +DL SSI G +
Sbjct: 485 GNDTYVYTDKFSVLAPADPARRVLSDLGGTDNVNTASIA-SDTLLDLRPGYSSSIDG--Q 541
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I+ TVIE+ GNDV+IGN A N GND+ DG G DT
Sbjct: 542 TVVISAGTVIENADTGDGNDVLIGNDAANSLRGWRGNDLLDGGPGADTL 590
>gi|302383520|ref|YP_003819343.1| hypothetical protein Bresu_2411 [Brevundimonas subvibrioides ATCC
15264]
gi|302194148|gb|ADL01720.1| hypothetical protein Bresu_2411 [Brevundimonas subvibrioides ATCC
15264]
Length = 859
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIGGYEKNMTIAQHTVIESV---VGSS 275
T+ SGG+D+ ++T +G V + + +S I Y+ ++ + ++ + +GS+
Sbjct: 622 TMVGSGGNDVYEVTEVGDVVYEAAAEGTDTVYSYIDTYQMSLNVETLNLVGTARVGLGSA 681
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GND ++GN+ +N + GND+ G +G+D F++ S
Sbjct: 682 GNDTIVGNAQDNTLNGNGGNDILTGGTGVDQFWHLGAS 719
>gi|330890708|gb|EGH23369.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 521
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T + +++ G +GND++ G + N+ + GNDV DG +G D
Sbjct: 155 TVNGGSGNDTFSGGAGADTLNGDAGNDLLQGGAGNDTLYGGDGNDVLDGGAGNDQLNGGD 214
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + +Y ANE + + ++ ++ AD +NV SI ++ L
Sbjct: 215 GDDTYLFGKGAGQDTIYYANEAR---VGKLDTVKLAD-----LNVSDVSITRDSSDL--L 264
Query: 372 IQVIG-QDVFESMKHFYE 388
I+V G D M HF E
Sbjct: 265 IRVNGTTDNLRVMNHFAE 282
>gi|321470488|gb|EFX81464.1| hypothetical protein DAPPUDRAFT_303491 [Daphnia pulex]
Length = 142
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 52 QEVARWALGEWSKVVDLTF----EETSIHSDIKFISS---NNGYVCTPRYDSRYFMEINF 104
+E+A+ A W+ V DLTF E +++ +I F+S G V R ++F
Sbjct: 8 REIAK-AFQMWADVADLTFVHLNESSTVDIEILFVSGVYDGPGGVLAKSSYPREGAFVHF 66
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
D+++ W + K T L A H+ GH LGL H
Sbjct: 67 DESETWTHNSDKETSLLQVATHQFGHTLGLRH 98
>gi|329848979|ref|ZP_08264007.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844042|gb|EGF93611.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1192
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 98/252 (38%), Gaps = 80/252 (31%)
Query: 125 LHEIGHALGLMH------------------PGSYNGGYPVYGVDN-DYENDSFLTSVMSY 165
LHEIGH +GL H PG P +G D D++ SVM+Y
Sbjct: 152 LHEIGHTMGLKHGHSDYTTYDLTDDDYVDKPG------PRFGTRALDAAEDNWAHSVMTY 205
Query: 166 FMPQDSMMD---ASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ-------- 213
D F T M +DI A+Q +YGA G + GN Y ++
Sbjct: 206 RSASGYDTDFQGDEFNQPQTYMQNDIAALQYLYGANFGFNSGNTTYTFDIGTGEMFVDGV 265
Query: 214 -KDSP---------FIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIG---- 254
+ +P +T++D G D + + N+ IDLN +WS++
Sbjct: 266 GQGTPELNVFGKGLIFRTVWDGNGVDTYNFS------NFYTHQSIDLNPGAWSTMSSGNL 319
Query: 255 ---------------GYEKNMTIAQ---HTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N + + ++IE+ G SG+D ++GN A N + G+D
Sbjct: 320 VDLRPKDDSEDPLAPGNLANALLFEGDTRSLIENAKGGSGHDTIVGNQAANTLDGNGGSD 379
Query: 297 VFDGSSGLDTFF 308
+G +G D +
Sbjct: 380 TINGGTGNDWLY 391
>gi|260575932|ref|ZP_05843927.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259021858|gb|EEW25159.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 878
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + N T+A T + + G +G D + G N+ +G D+ DG +G+DT Y A
Sbjct: 321 SLSGGDSNDTLAGGTGADLLSGGTGTDSLYGGDDNDTLLGGTGADLLDGGAGIDTADYTA 380
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
S + A DA D LS +E L
Sbjct: 381 SSIAVNVNLGTGATSGGDA---AGDTLSGIENL 410
>gi|3062797|dbj|BAA25683.1| Insecticidal protein [Serratia marcescens]
Length = 172
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 52 QEVARWALGEWSKVVDLTFEETSI--HSDIKFIS---SNNGYVCTP-RYDSRYFMEINFD 105
QE A+ +L W+ V ++ F E + S+I F + + Y P Y+ + N D
Sbjct: 30 QEQAKLSLQSWADVANIKFVEVAAGQPSNITFGNYEGTGQAYALKPFSYNGNDYRGFNSD 89
Query: 106 KADVWRYGIGKGTILSHNAL---------HEIGHALGLMHPGSYNGGY--PVYGVDNDYE 154
W Y I + H L HE+GH LGL HPG+YN G P Y Y
Sbjct: 90 -GQSW-YNIKNHSENLHPELGNYGRLTITHEVGHTLGLDHPGTYNAGQGSPNY-TKAVYA 146
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGY 179
D+ SVMSY+ +S+ +A G+
Sbjct: 147 EDTRQFSVMSYW--NESITNADHGH 169
>gi|296534518|ref|ZP_06896938.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296265155|gb|EFH11360.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 1158
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 41/227 (18%)
Query: 193 KIYGAPKGSLGNNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+++GA G +I+ E P Q + D G+D ++ + G IDL+ +
Sbjct: 433 QLFGAAPGQDSEHIFTNEYAALAAAMPERQVLRDEAGEDRINAAAVSG-PVRIDLSGATE 491
Query: 251 SSIGGYEKNMTIAQHTVIESVV---------------------------GSSGNDVVIGN 283
S I G + + IA+ TVIE + G GND++ G
Sbjct: 492 SRIAG--QRLVIAEGTVIEHALGGDGDDWLGGNAADNHLIGNRGSDTLRGLEGNDILEGG 549
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-----YDANEHKQDFL 338
+ +++ +G+DV +G G D A LY++ +A+I YD D+
Sbjct: 550 AGDDLLIGDAGDDVLEGGPGADRMLGGAGDDLYRVDDPRDAVIEQEGEGYDTVRASIDYA 609
Query: 339 --SDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ VERL I + N I+ + L+ + G DV
Sbjct: 610 LPAHVERLELLPGARIGAGNALGNVIIGHDGGVR-LLGLAGDDVLRG 655
>gi|291389397|ref|XP_002711214.1| PREDICTED: matrix metalloproteinase 19 [Oryctolagus cuniculus]
Length = 525
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKF-ISSNN 86
R++ LT L+ T + A+E A WS+V LTF+E +DI+
Sbjct: 103 RWRKKHLTFRILNLPSTLPSHIAREALLQAFRYWSEVAPLTFQEVQAGRADIRLSFHGRQ 162
Query: 87 GYVCTPRYDSR----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
C+ +D ++FD+ ++W G +G L A HE+GHALGL H
Sbjct: 163 SLYCSNAFDGPGRVLAHADIPELGSVHFDEDELWTEGTYRGVNLRIIAAHELGHALGLGH 222
>gi|166363981|ref|YP_001656254.1| putative peptidase [Microcystis aeruginosa NIES-843]
gi|166086354|dbj|BAG01062.1| putative peptidase [Microcystis aeruginosa NIES-843]
Length = 2534
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 43/88 (48%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D+ G D L+ ++L + ++ +T+A T E+V+G S ND ++
Sbjct: 2227 VIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLNDNIV 2286
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFY 309
GN+ N +GND +G + DT+ +
Sbjct: 2287 GNTLANSLSGGAGNDTLNGGANNDTYLF 2314
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D+ G D L+ ++L + ++ +T+A T E+V+G S ND ++
Sbjct: 2325 VIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLNDNIV 2384
Query: 282 GNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
GN+ N +GN D GS+GLDT Y
Sbjct: 2385 GNTLANSLSGGAGNDNLTGGLGKDTLTGSTGLDTLTY 2421
>gi|329848975|ref|ZP_08264003.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844038|gb|EGF93607.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 827
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 121/322 (37%), Gaps = 76/322 (23%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETS----IHSDIKFISSNNGYVCTPRYDSRYFMEI 102
N Q AR+ALG LTF E + H++I+ + + + T D +
Sbjct: 113 FNGAQQAGARYALGLVDGYTLLTFSEIAETADTHANIRLSQTGDASLVTA--DGNFPGSD 170
Query: 103 NFDKADVWRYGIGKGTILSHNA--------LHEIGHALGLMH-----------PGSY-NG 142
++D D+W + + A LHEIGH+LGL H G Y +G
Sbjct: 171 SWD-GDIWLTTSSQPFYTTPQAGNWGMAVLLHEIGHSLGLKHGHEDYTTVDLTAGGYVDG 229
Query: 143 GYPVYGVDN-DYENDSFLTSVMSYFM-PQD------SMMDASFGYCATPMVSDIVAVQKI 194
P YG ++DS+ SVM+ P + S F T M +DI A+Q +
Sbjct: 230 PGPRYGTRALATQHDSWAYSVMTARSDPNNNAGENPSFQGDGFNQPQTYMQNDIAALQYL 289
Query: 195 YGAP-KGSLGNNIYKIEVQQKD-----------------SPFIQTIYDSGGDDLLDLTLI 236
YGA GN IY + +TI+D G D D +
Sbjct: 290 YGADFTTQAGNTIYSFDAATGQMFINGAAQAVPTQNGGVGKIFRTIWDGNGIDTYDFSNF 349
Query: 237 GGVKNYIDLNTESWSSIGGYE----------------KNMTIA------QHTVIESVVGS 274
+ I+L+ +WS++ + N+ A ++IE+ G
Sbjct: 350 SNNQT-INLDPGAWSTMNAVQLAELRPLDAEVTVNAPGNIANALLYNNDTRSLIENANGG 408
Query: 275 SGNDVVIGNSANNVFFESSGND 296
+G D + GN N + GND
Sbjct: 409 AGQDTISGNDGGNQLHGNDGND 430
>gi|241205214|ref|YP_002976310.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859104|gb|ACS56771.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 932
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS G+D++ GN N+ GND +G +G+DT +A ++ + +N V +
Sbjct: 266 GSGGSDLINGNDGNDKLTGGDGNDTINGGAGIDT-AAFAGNFAEYSFEIDNGSRVVTSAL 324
Query: 333 HKQDFLSDVERLRFADQCID 352
D L+DVE RFAD D
Sbjct: 325 EGTDRLTDVEFARFADGVYD 344
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYRFEN 323
G+ GND+ GN N++ ++GND G +G DT ++ ++ + N
Sbjct: 626 TGTDGNDIFDGNGGNDILNGNAGNDKLTGGAGDDTINGGDGIDTAIFSGNFANYSFALNN 685
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCID 352
+ + D L+DVE RFAD D
Sbjct: 686 GDHILTSAGEGTDTLTDVELARFADGVYD 714
>gi|84499402|ref|ZP_00997690.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
gi|84392546|gb|EAQ04757.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
Length = 2266
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+T S+ G E + Q+ IE ++ S GND + GNSA N FF + G+D+ +G G D
Sbjct: 371 STSGAPSVRGGEFGSELVQN--IEGMIASRGNDRITGNSAANAFFGNGGSDLLEGGGGDD 428
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ L ++ F + V + F +RL
Sbjct: 429 RLGFGEGQALSDVFSFPGSSGVQAPGSDSRLFYDIEQRL 467
>gi|329851022|ref|ZP_08265779.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
gi|328839868|gb|EGF89440.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
Length = 4880
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA--II 326
++V G+ GND + G + ++ +GND G G DT + Y I + +I
Sbjct: 3909 DTVSGNGGNDDITGGTGDDALTGGAGNDTLSGGDGGDTAIFAGARDQYTIVSDQAGGYVI 3968
Query: 327 V---YDANEHKQDFLSDVERLRFADQCID 352
V + + D S VE L+FADQ ID
Sbjct: 3969 VDNFPENGDEGTDHFSGVEYLQFADQTID 3997
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V G + D + G S N+ + G+D DG SG+D + + I E+ ++
Sbjct: 1511 DTVRGGNNRDSLFGGSGNDTLYGFGGDDTIDGGSGIDIVYISGNRSSFTITETEDGDVIV 1570
Query: 329 DANEHKQDFLSDVERLRFADQCI 351
A D+L+ +E +RF DQ +
Sbjct: 1571 -AGSTTTDYLTGIEVIRFNDQDV 1592
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQ 335
N+++ GN NN+ +GND G G DTF A S L Y + VY N
Sbjct: 4131 NNLITGNDGNNLLTGGAGNDTLTGGLGDDTF---AVSGLRSAYHVTVSGGVYTVNGTDGT 4187
Query: 336 DFLSDVERLRFADQC 350
D +S VE + FAD
Sbjct: 4188 DTVSGVENIEFADGT 4202
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 75/194 (38%), Gaps = 21/194 (10%)
Query: 227 GDDLLDLTL-IGGVKNYIDLNT--ESWSSIGGYEKNM--TIAQHTVIESVVGSSGNDVVI 281
GDDL+D T GG + T ++ + GG T+ +S+ G + D +I
Sbjct: 1085 GDDLVDATAQAGGTAGSLSGGTGNDTLLASGGNSDGSVNTVDGGAGADSITGGAYGDSLI 1144
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQ----D 336
G ++V GND +G +GLDT + + R E +I N + D
Sbjct: 1145 GGDEDDVIRGDGGNDAVNGGAGLDTILINGNRADFTLVRDSETGVITLTDNRNGAPQGID 1204
Query: 337 FLSDVERLRFADQCIDSVNVKQRSI--------LEYTASYEDLIQVIGQDVFESMKHFYE 388
++ E LRF D V + RS+ L +A+ + + + G DV
Sbjct: 1205 TITGAEVLRFNDL---DVTYEGRSLTGTELVDTLTGSAANDTITALGGNDVINGNGGADS 1261
Query: 389 FGLSEGRDITFDSY 402
G D SY
Sbjct: 1262 VDAGAGDDSVTTSY 1275
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY--YAPSYLYKIYRFENAIIVY 328
++G SGND + G + ++ +G+D DG +G DT A + + A+ +
Sbjct: 1662 LLGESGNDSLSGGAGDDEIGAEAGDDQVDGGTGRDTVLVDGNASDFTISVDTLSGAVTLT 1721
Query: 329 DANEHK---QDFLSDVERLRFADQCI 351
D + D L+ VE +RF D+ +
Sbjct: 1722 DNRDGSPVGSDTLTGVELIRFNDEFV 1747
>gi|188583181|ref|YP_001926626.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
gi|179346679|gb|ACB82091.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
Length = 1264
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 364 YTASYEDLIQVI-GQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRG 420
Y Y ++ ++ G F+ +KH+ + G++ G D F + Y+ D V +++
Sbjct: 33 YITKYPEVARLAKGDSNFDPVKHYMQHGVAAGYDPHPEFSTSYYIQLNPD---VVAANQN 89
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
HYI +G +EGR P K E+IA +++ D+ F++ G E +
Sbjct: 90 PFF-HYIMYGAEEGRRPKHGK--EFIALSGEIVRGQTDSSTA-------FTDTGGEIYDY 139
Query: 481 VT--FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPD-AFKALEYIASHEDL 536
+ FD+ Y Y+D+ + G HYI G EGR+P F Y+ + D+
Sbjct: 140 IKGEFDADYYKSKYNDIEAHCEINPGFDCVHHYIECGAAEGRDPSRVFSTQHYLEVNSDV 199
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRS 564
NA + HF G EGR+
Sbjct: 200 RNASINP-------FYHFVKHGQTEGRT 220
>gi|332839031|ref|XP_001154045.2| PREDICTED: matrix metalloproteinase-19 [Pan troglodytes]
Length = 505
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIK--FISSN 85
R++ LT L+ T A+ R A +WS V LTF+E +DI+ F
Sbjct: 103 RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHGRQ 162
Query: 86 NGYVCTPRYDSR----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ Y C+ +D ++FD+ + W G G L A HE+GHALGL
Sbjct: 163 SSY-CSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYHGVNLRIIAAHEVGHALGLG 221
Query: 136 H 136
H
Sbjct: 222 H 222
>gi|126343573|ref|XP_001374247.1| PREDICTED: similar to phospholipase C gamma 1 [Monodelphis
domestica]
Length = 584
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 77/217 (35%), Gaps = 42/217 (19%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------------- 75
R++ LT L F + QE+ AL WSKV LTF E
Sbjct: 201 RWEKLNLTYRILRFPWQLVKEQVQEMMAEALRVWSKVTPLTFTEVRAGRADIMIDFTRYW 260
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
H D G + + + +++FD + W G GT L A HE GHALGL
Sbjct: 261 HGDNLPFDGPGGVLAHAFFPKTHRQGDVHFDYDETWTAGSDLGTDLLQVAAHEFGHALGL 320
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + ++MS F +F Y + D +Q +
Sbjct: 321 QH-------------------STEAKALMSPFY--------TFRYPLSLSADDRRGIQHL 353
Query: 195 YGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDL 230
YG P+ + + N +EV P + D+ D
Sbjct: 354 YGRPRPAAAHANEISLEVSPHTPPSLPLRPDACATDF 390
>gi|323139733|ref|ZP_08074771.1| hypothetical protein Met49242DRAFT_4159 [Methylocystis sp. ATCC
49242]
gi|322395004|gb|EFX97567.1| hypothetical protein Met49242DRAFT_4159 [Methylocystis sp. ATCC
49242]
Length = 136
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 481 VTFDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNPDAFKALE--YIASHEDLI 537
+ D YL Y+D+ R + +AA HY +G KE R P K E Y + D++
Sbjct: 40 IRVDEDWYLARYEDVGRAIEAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIV 99
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGR 563
A D ++ ++G+ HF G+ EGR
Sbjct: 100 AAIED--NIFESGQQHFERSGFAEGR 123
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 397 ITFDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNPDAFKALE--YIASHEDLI 453
I D YL Y+D+ R + +AA HY +G KE R P K E Y + D++
Sbjct: 40 IRVDEDWYLARYEDVGRAIEAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIV 99
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
A D ++ + G+ HF G EGR + L+ G
Sbjct: 100 AAIED--NIFESGQQHFERSGFAEGRLPYPNFSLFRG 134
>gi|323137764|ref|ZP_08072840.1| proprotein convertase P [Methylocystis sp. ATCC 49242]
gi|322397061|gb|EFX99586.1| proprotein convertase P [Methylocystis sp. ATCC 49242]
Length = 606
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENA 324
T IE+++GSS ND +IGN NV GND +G +G+DT SYL+ R N
Sbjct: 398 TSIENLIGSSFNDTLIGNGGPNVIEGGPGNDSINGGAGIDTV-----SYLHATARVVVNL 452
Query: 325 IIVYDANEHKQ--DFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
IV N D L+ +E + F D + +++E A + + +G+D
Sbjct: 453 SIVGAQNTQGAGVDTLTAIENIVGTPFNDVLTGN---NLANVIEGGAGKDIVRGGLGRDT 509
Query: 380 FESMKHFYEFGLSEGRDITFD 400
F + + RD+ D
Sbjct: 510 FV-FARLTDMSVGPNRDVIVD 529
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 27/142 (19%)
Query: 189 VAVQKIYGAPKGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
VAV P+ +LG I +IE S F T+ + G ++++ GG N +
Sbjct: 235 VAVNLALAGPQNTLGAGIDTLLQIE-NLIGSAFNDTLVGNAGANIIE----GGPGND-SI 288
Query: 246 NTESWSSIGGYEKN---------MTIAQHTV---------IESVVGSSGNDVVIGNSANN 287
N + S YE +T AQ+T+ IE++ GS ND +IGN+ N
Sbjct: 289 NGAAGSDTASYENASSRVVVNLALTSAQNTIGAGTDTLLQIENLRGSRFNDTLIGNNGPN 348
Query: 288 VFFESSGNDVFDGSSGLDTFFY 309
V GND +G +G DT Y
Sbjct: 349 VIEGGPGNDSINGGAGFDTASY 370
>gi|295688698|ref|YP_003592391.1| hemolysin-type calcium-binding region [Caulobacter segnis ATCC
21756]
gi|295430601|gb|ADG09773.1| Hemolysin-type calcium-binding region [Caulobacter segnis ATCC
21756]
Length = 1481
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 16/136 (11%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAII 326
IE V G+ D+++G+ N F G+D+ DG G+DT Y S Y + +
Sbjct: 518 IEGVKGTGYRDILVGSDGANTFEGRGGDDIIDGKGGIDTAVYDGNSTDYTWTHNANGSWT 577
Query: 327 VYD--ANEHKQDFLSDVERLRFADQCI----DSV---------NVKQRSILEYTASYEDL 371
V D AN D L +VE L+F D+ + D+ +V QR + ++
Sbjct: 578 VRDSRANWTGTDTLLNVEILKFKDKSVTLSSDTTATVGDVYRPDVVQRLATSSSFGFDAT 637
Query: 372 IQVIGQDVFESMKHFY 387
I + G+ +F + Y
Sbjct: 638 ISIDGKTIFSASSGGY 653
>gi|188584260|ref|YP_001927705.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
gi|179347758|gb|ACB83170.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
Length = 782
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 143/380 (37%), Gaps = 70/380 (18%)
Query: 126 HEIGHALGLMH-PGSYNG-GYPVYGVDNDYE---NDSFLTSVMSYFMPQDSMMDASFGYC 180
HEIGHALG + P + G V+ +N + L S+ + ++ +MD +
Sbjct: 129 HEIGHALGFIDFPATKAANGALVFNGENTRTVLGGPALLDGSRSHVVGREDLMDPYSNWG 188
Query: 181 ATPMVSDI-VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI----QTIYDSGGDDLLDL-- 233
+SD+ +A+ + G P I ++ D ++ T + GGDD +D
Sbjct: 189 GRSGISDLDLAMLQDKGMP----------IATERTDKIWLGNRADTFFGYGGDDWIDGGR 238
Query: 234 ---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L GG+ N +++ G GND + G N+
Sbjct: 239 GDDKLFGGLGN---------------------------DTLSGGDGNDALDGGEGNDTLS 271
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D DG +G D + S Y +Y A+ + D L+ +E L F D
Sbjct: 272 GGNGSDTLDGGAGTDRAVFAGRSQDYVALYGATGALALKHLASGSIDTLTSIETLTFDDT 331
Query: 350 CIDS----VNVKQR--SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ +++QR + A YE + + + + + S +TFD
Sbjct: 332 VLGVPGLLAHLQQRYGTTQAGKAPYEMALNAASDEAYRAEIPEIDGAFSVTARVTFDD-- 389
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
G Y + VF + GA + V R+ AF+ L+ H A D++
Sbjct: 390 VAGGY--FQRVFDTGNGAGRDNIWLGQVGNSRDM-AFEILDGAMKHR------ITAKDVI 440
Query: 464 QVGKDHFSNFGCEEGRFVTF 483
+ G + G +E +++
Sbjct: 441 KQGVEAQWTAGVDERGWMSL 460
>gi|327277063|ref|XP_003223285.1| PREDICTED: matrix metalloproteinase-19-like [Anolis carolinensis]
Length = 475
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 62 WSKVVDLTFEETSI-HSDIKF-ISSNNGYVCTPRYDSRYFM----------EINFDKADV 109
WS V LTF+E +DI+ ++ + C+ +D + ++FD A+
Sbjct: 141 WSDVTRLTFQEVRTGRADIRLAFHGSSPWGCSRPFDGPGHVLAHADIPELGTVHFDSAEH 200
Query: 110 WRYGIGKGTILSHNALHEIGHALGL---MHP-----GSYNGGYPVYGVDND 152
W G +G L A HEIGHALGL HP SY+G P + + +D
Sbjct: 201 WTEGTPRGVNLRIIAAHEIGHALGLGHSRHPTALMAPSYSGYRPRFRLHHD 251
>gi|163853954|ref|YP_001641997.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|163665559|gb|ABY32926.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
Length = 781
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 90/242 (37%), Gaps = 53/242 (21%)
Query: 126 HEIGHALGLMH-PGSYNG-GYPVYGVDNDYE---NDSFLTSVMSYFMPQDSMMDASFGYC 180
HEIGH LG + P + G ++ +N L ++ + +MD G+
Sbjct: 128 HEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPVVLDGARAHVWGSEDLMDPYLGWG 187
Query: 181 ATPMVSDI-VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI----QTIYDSGGDDLLDL-- 233
+SD+ +A+ + G P I ++ D ++ T + GGDD +D
Sbjct: 188 QRSYISDLDLAMLQDKGMP----------ISTERADKMWLGNRADTFFAYGGDDWIDGGW 237
Query: 234 ---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L GGV N ++++G GND + G + ++
Sbjct: 238 GDDKLFGGVGN---------------------------DTLIGGDGNDALDGGAGDDTLI 270
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G D +G G+D S Y +Y ++ + D L+ +E L F D
Sbjct: 271 GGNGGDTLEGGEGIDRAVLTGRSQDYVALYGAAGSLAIKHLGSGNIDTLTSIETLNFDDT 330
Query: 350 CI 351
+
Sbjct: 331 VL 332
>gi|326387768|ref|ZP_08209374.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207814|gb|EGD58625.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Novosphingobium nitrogenifigens
DSM 19370]
Length = 229
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 13/72 (18%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-MMDASFG----Y 179
LHEIGHALGL HP + + + Y+N F ++MSY PQ++ D S G
Sbjct: 166 LHEIGHALGLKHP------FEAPTIPSGYDNRRF--TIMSYTDPQNAYWYDKSTGTYKYL 217
Query: 180 CATPMVSDIVAV 191
TPMV DI AV
Sbjct: 218 IMTPMVYDIAAV 229
>gi|78355641|ref|YP_387090.1| von Willebrand factor, type A [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218046|gb|ABB37395.1| von Willebrand factor, type A [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 686
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ +YI N E+ +S Y + T+ + + G SGNDV++G + N++ GND
Sbjct: 520 IVDYIRDNHEALASGSRYGGDDTLDGGAGDDIMYGQSGNDVLLGGAGNDILVGGPGNDTL 579
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK----QDFLSDV 341
+G +G DTF ++ + I+ YD + +D LS V
Sbjct: 580 EGGTGADTFMWHNGDQGTVTTPAHDHIMDYDTTQGDSLDLRDLLSGV 626
>gi|330809471|ref|YP_004353933.1| mannuronan C-5-epimerase, multi-domains protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327377579|gb|AEA68929.1| Putative mannuronan C-5-epimerase, multi-domains protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 1870
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 40/177 (22%)
Query: 201 SLGNNIYKIEVQQKDSPF-IQTIYDSGGDDLLDLTLIGGV----------------KNYI 243
SLG + +I +Q D + Y +G D+ + +I G +N I
Sbjct: 294 SLGGAVPEIIIQSYDDTLGVSGKYFNGSDNTIQGNIISGSDLSTYGVAERNEDGTDRNAI 353
Query: 244 DLNTESWSSIGG---YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
NT S +S G Y ++ + +V G++GND ++G++AN +F+ +GND +G
Sbjct: 354 IANTISHTSKGATLVYGDGSYVSATVPMTTVQGTAGNDTLLGSAANEIFYGGAGNDTING 413
Query: 301 S------------------SGLDTFFYYAPSYLYK--IYRFENAIIVYDANEHKQDF 337
+ +G DTF + A S Y+ F++ I +D + K D
Sbjct: 414 AAGSDILVGGAGIDKLTGGTGADTFRFVAQSDSYRNATTSFDDTITDFDVTQDKIDL 470
>gi|416552|emb|CAA46638.1| hatching enzyme [Paracentrotus lividus]
Length = 587
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 17/107 (15%)
Query: 45 TELNPN-AQEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSR-- 97
++LN N A++ R A W V L+F E TS+ IKF S ++G + +D R
Sbjct: 189 SDLNQNDAKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKFGSYDHGDGIS--FDGRGG 246
Query: 98 ----YFMEIN----FDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
F+ N FD ++ W G GT L A HE GH+LGL H
Sbjct: 247 VLAHAFLPRNGDAHFDDSETWTIGTRSGTNLFQVAAHEFGHSLGLYH 293
>gi|254504843|ref|ZP_05116994.1| hypothetical protein SADFL11_4882 [Labrenzia alexandrii DFL-11]
gi|222440914|gb|EEE47593.1| hypothetical protein SADFL11_4882 [Labrenzia alexandrii DFL-11]
Length = 332
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 78/211 (36%), Gaps = 59/211 (27%)
Query: 361 ILEYTASYEDLIQVIGQDVF-----ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+L+Y E ++ +G F E H E GL EG I + L+ G + VF
Sbjct: 168 VLQYLEEAELELKCLGFTAFNFTNPEGTNHCEETGLVEGSGIRTSAVLHAG----VDEVF 223
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
Y+ ++D+ A D G H++ FG
Sbjct: 224 -----------------------------YLQENDDVAAAMLD-------GSAHYNTFGW 247
Query: 476 EEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS 532
EGR FD+ YL D V +D HY+ HG +EGR+P F Y+ +
Sbjct: 248 REGRDPNGWFDTDWYLAQNTD---VAAADINPLT-HYLDHGWREGRSPSEYFDGDRYLTA 303
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ D+ NA D H FG EGR
Sbjct: 304 NTDVANAGIDP-------LSHMLMFGLAEGR 327
>gi|119493876|ref|ZP_01624441.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119452388|gb|EAW33579.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 358
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG-----RFVTFDSYLYLG 490
N D F Y+ + L A ++Q G DHF FG + G R+ +D YL
Sbjct: 2 NFDIFDEQYYLQQYPYLQPAIEQG--IIQSGLDHFQRFGLQLGLTGVSRY--YDEAYYLE 57
Query: 491 SYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA--FKALEYIASHEDLINAFADAPDLV 547
+ D+ F R + H+I G +EGRN + Y+ ++ LI+
Sbjct: 58 NNPDVAEAFNDRRFPSGLSHFIVFGYEEGRNNTTSDYDETFYLNNNSYLISQIETG--TY 115
Query: 548 QAGKDHFSNFGYEEG-RSITFNPDLYLTSYDDLWNVFGSDRSAAAQ-HYITHGMKEGRAL 605
++G HF G ++G ++ +F YL D+ + + Q HY +G EGR+
Sbjct: 116 KSGFSHFIKVGRQQGLQATSFTNPEYLQRNPDIVDAINNGVLPTGQTHYREYGQFEGRST 175
Query: 606 GISGMQFKSVM 616
+G V+
Sbjct: 176 MFTGTPSSDVI 186
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 383 MKHFYEFGLSEGRDIT---FDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNPD 438
+ HF FG EGR+ T +D YL + L + + H+I G ++G
Sbjct: 75 LSHFIVFGYEEGRNNTTSDYDETFYLNNNSYLISQIETGTYKSGFSHFIKVGRQQGLQAT 134
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+F EY+ + D+++A + ++ G+ H+ +G EGR F
Sbjct: 135 SFTNPEYLQRNPDIVDAINNG--VLPTGQTHYREYGQFEGRSTMF 177
>gi|240269358|gb|ACS52544.1| putative matrix metalloproteinase [Anopheles gambiae]
Length = 210
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 37 THRLSFDITELNPNA--QEVARWALGEWSKVVDLTF---EETSIHSDIKFISSNNG---- 87
T+R+S L A +E+A+ A WS+ DL F + ++H DI+F + +G
Sbjct: 48 TYRISKYPRRLERTAVDKEIAK-AFXVWSEYTDLRFTPKKTGAVHIDIRFEENEHGDGDP 106
Query: 88 -----YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--- 139
Y Y + +FD A+ W +GT L A HE GH+LGL H
Sbjct: 107 FDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQVAAHEFGHSLGLSHSDVRSA 166
Query: 140 -----YNGGYPVYGVDND 152
Y G PV+ +D+D
Sbjct: 167 LMAPFYRGYDPVFRLDSD 184
>gi|329851818|ref|ZP_08266499.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
gi|328839667|gb|EGF89240.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
Length = 593
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 18/171 (10%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G++GN+V+ GN NN ++GNDV DGS G DT + Y I+ + A V + N
Sbjct: 397 TGNAGNNVLYGNPGNNKLDGAAGNDVLDGSVGQDTLIGGLGNDTYYIH--DTAAKVTEVN 454
Query: 332 EHKQDFL-SDV---------ERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + SDV E L ID+ +IL A+ L + G+D+
Sbjct: 455 GEGTDIIYSDVSYNLHGRYIETLELTGIDNIDATGNSVNNILIGNANSNTLNGLGGKDIL 514
Query: 381 ES--MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ F L +D D + S +D+ N+ G G A +T
Sbjct: 515 TGGLGADIFLFQLGAAKDTITD---FSASDNDMININGFTGGVANTGLVTQ 562
>gi|166365040|ref|YP_001657313.1| hypothetical protein MAE_22990 [Microcystis aeruginosa NIES-843]
gi|166087413|dbj|BAG02121.1| hypothetical protein MAE_22990 [Microcystis aeruginosa NIES-843]
Length = 445
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N+T+ I + G+S N+++ GN++ N FF ++GND +G +G DT Y A S +
Sbjct: 166 ENLTLTGFGNINAT-GNSKNNILTGNASANTFFGTAGNDTINGGAGFDTANYSALSNVVT 224
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ F V + D L VE + + D+V+ S+ T +L
Sbjct: 225 LGAFG----VLNKGALGTDTLIAVESIVGSSLLGDTVDHSGASVALATGRVTNL 274
>gi|218514447|ref|ZP_03511287.1| putative hemolysin-type calcium-binding protein [Rhizobium etli
8C-3]
Length = 435
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ +S+ GS G+DV+IG N+V ++ SG+DV DG +G DT + +
Sbjct: 92 GGSGNDTLVGAGGSDSLFGSGGSDVLIGGEGNDVLYDESGDDVLDGGNGDDTMSDFGGAV 151
Query: 315 LYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
N + AN D SD + L + + + I YT S E ++
Sbjct: 152 ASLSGGAGNDGMWTGANMTGTVDGGSDRDVLFVTGGNLTGLAISNVEI--YTTSAEFVLG 209
Query: 374 VIGQ-DVFESMKHF 386
+ Q D F+++ F
Sbjct: 210 TVAQLDGFDTITTF 223
>gi|123090|sp|P22757|HE_PARLI RecName: Full=Hatching enzyme; Short=HE; Short=HEZ; AltName:
Full=Envelysin; AltName: Full=Sea-urchin-hatching
proteinase; Contains: RecName: Full=Hatching enzyme 18
kDa form; Flags: Precursor
gi|9996|emb|CAA37667.1| pre-pro-hatching enzyme [Paracentrotus lividus]
Length = 587
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 45 TELNPN-AQEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSR-- 97
++LN N ++ R A W V L+F E TS+ IKF S ++G + +D R
Sbjct: 189 SDLNQNDVKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKFGSYDHGDGIS--FDGRGG 246
Query: 98 ----YFMEIN----FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS--------YN 141
F+ N FD ++ W G GT L A HE GH+LGL H Y
Sbjct: 247 VLAHAFLPRNGDAHFDDSETWTEGTRSGTNLFQVAAHEFGHSLGLYHSTVRSALMYPYYQ 306
Query: 142 GGYPVYGVDND 152
G P + +DND
Sbjct: 307 GYVPNFRLDND 317
>gi|284054806|ref|ZP_06385016.1| lipolytic enzyme, G-D-S-L [Arthrospira platensis str. Paraca]
Length = 300
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 51/226 (22%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y A +D+ I +FE+ +HF +G EGR+ FDS YL D+++
Sbjct: 13 YLAQNQDVQDAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDIQSEVEEGIT 72
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AA H++ G + R+P+ F D + P + Q G G F
Sbjct: 73 TAAAHFVNIGQTDNRSPNPFF---------DPVFYLQQNPTVSQ---------GVANGEF 114
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
F+ +L +G ++ L + + T ++ RN DA + +E
Sbjct: 115 TAFEHFLKIGQFEGLD---------PSESFNTEFYRD-RNFDAVEGIE------------ 152
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
+++ + +HF FG E GR + P L DDL N D
Sbjct: 153 ---DEIIGSIFEHFYRFGLELGR-LGAPPQL----MDDLSNAIALD 190
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSD 586
Y+A ++D+ +A AD L + +HFS +G EGR+ F+ + YL D+ +
Sbjct: 13 YLAQNQDVQDAIADG--LFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDIQSEVEEG 70
Query: 587 RSAAAQHYITHGMKEGRA 604
+ AA H++ G + R+
Sbjct: 71 ITTAAAHFVNIGQTDNRS 88
>gi|257061684|ref|YP_003139572.1| PKD domain containing protein [Cyanothece sp. PCC 8802]
gi|256591850|gb|ACV02737.1| PKD domain containing protein [Cyanothece sp. PCC 8802]
Length = 1502
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G+SGND +IGN+ N+V S+GND+ G SG DTF Y
Sbjct: 1394 LTGNSGNDTLIGNAGNDVITGSTGNDLLFGGSGADTFNY 1432
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
T+A + + + G+SGND++ GNS N+ ++GNDV GS+G D F
Sbjct: 1374 TTLAGTSADDLMNGTSGNDILTGNSGNDTLIGNAGNDVITGSTGNDLLF 1422
>gi|148692668|gb|EDL24615.1| matrix metallopeptidase 19, isoform CRA_c [Mus musculus]
Length = 378
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET---------SIHSDIKFISSNN----GYVCTPRYD 95
P + A WS V LTF E S H SN G V D
Sbjct: 105 PRVRAALHQAFKYWSSVAPLTFREVKAGWADIRLSFHGRQSLYCSNTFDGPGKVLA-HAD 163
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
I+FDK ++W G +G L A HE+GHALGL H
Sbjct: 164 IPELGSIHFDKDELWTEGTYQGVNLRIIAAHEVGHALGLGH 204
>gi|309366330|emb|CAP21608.2| hypothetical protein CBG_00098 [Caenorhabditis briggsae AF16]
Length = 381
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 31/141 (21%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
G + + RY +++FD+ ++W KG L A+HEIGH+LGL H ++
Sbjct: 86 KGNILAHAFFPRYGGDVHFDEDEMWSANKSKGVDLYAVAVHEIGHSLGLKHSANH----- 140
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP----KGS 201
S+M+ F Q + G DI AV+++YG+P K +
Sbjct: 141 --------------LSIMAPFYKQYT------GNVMHLHQDDIQAVKRLYGSPVKIRKRT 180
Query: 202 LGNNIYKIEVQQKDSPFIQTI 222
N I++ E+ + PF+ +
Sbjct: 181 NSNYIWRSELCTR--PFLDAV 199
>gi|307941953|ref|ZP_07657306.1| proprotein convertase P [Roseibium sp. TrichSKD4]
gi|307774859|gb|EFO34067.1| proprotein convertase P [Roseibium sp. TrichSKD4]
Length = 3659
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
IDL+ +WS I G + + + IE+V GND++ GN NN+ F G+D+ G++
Sbjct: 1778 IDLSGFNWSKISG--QPVVFNEGASIETVYAGDGNDLISGNKLNNILFGGRGHDLLRGNT 1835
Query: 303 GLDTFF 308
G D F
Sbjct: 1836 GDDIIF 1841
>gi|157423149|gb|AAI53751.1| LOC100127631 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 62 WSKVVDLTFEE-TSIHSDIKFISSNNGYVCTPRYDSR----------YFMEINFDKADVW 110
WS V LTF+E T +DI+ G C+ +D ++FD+ ++W
Sbjct: 147 WSDVTPLTFKEVTRGRADIRISFHRRGNGCSRPFDGPGKVLAHADIPELGTVHFDEDELW 206
Query: 111 RYGIGKGTILSHNALHEIGHALGLMH 136
G +G L A HE+GHALGL H
Sbjct: 207 TEGTYEGVNLRIIAAHELGHALGLGH 232
>gi|119492643|ref|ZP_01623822.1| hypothetical protein L8106_00030 [Lyngbya sp. PCC 8106]
gi|119452981|gb|EAW34152.1| hypothetical protein L8106_00030 [Lyngbya sp. PCC 8106]
Length = 642
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAA 422
Y A+ DL Q+ + + HF +GL EGR F+S + L +Y +L + +
Sbjct: 51 YKANNPDLAQLSDDQL---VSHFQVYGLEEGR--VFNSIINLNTYRELNTDLANLNNREL 105
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK--DHFSNFGCEEGRF 480
H I G+ E R L Y + +D PD + +H + FG +E R
Sbjct: 106 CEHLIDFGLSEERLFSPVVDLNYYQQNN------SDLPDDWSSSQLLEHLTQFGLDENRL 159
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAA--RHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
F + L Y + + D ++ H G+ E R L Y IN
Sbjct: 160 --FSPLVDLNYYQQINSDLPDDWSSSQLLEHLTQFGLDENRLFSPLVDLNYYQQ----IN 213
Query: 539 AFADAPDLVQAGK--DHFSNFGYEEGR--SITFNPDLYL 573
+D PD + + +H + FG +E R S FN YL
Sbjct: 214 --SDLPDDWSSSQLLEHLTQFGLDENRLFSPVFNIQDYL 250
>gi|170747645|ref|YP_001753905.1| hypothetical protein Mrad2831_1218 [Methylobacterium radiotolerans
JCM 2831]
gi|170654167|gb|ACB23222.1| hypothetical protein Mrad2831_1218 [Methylobacterium radiotolerans
JCM 2831]
Length = 518
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD Y Y D+R D G A H+I HGV+EGR P+ F + YI+ + + N
Sbjct: 364 FDESFYKNEYSDVR-----DSGVNALEHFIQHGVREGRWPNEFFDTIWYISEYMNYDNVG 418
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL-WNV-FGSDRSAAAQHYITHG 598
+ L+ H+ N E + + NP+ Y + L WN + QH++ G
Sbjct: 419 MNP--LI-----HYCN----EWKGMNVNPNPYFSVRSYLEWNPDVAASGEEPCQHFLRMG 467
Query: 599 MKEGRALGIS 608
+EGR S
Sbjct: 468 GREGRMTDFS 477
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 18/127 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y Y D+R D G A H+I HGV+EGR P+ F + YI+ + + N
Sbjct: 364 FDESFYKNEYSDVR-----DSGVNALEHFIQHGVREGRWPNEFFDTIWYISEYMNYDN-- 416
Query: 457 ADAPDLVQVGKDHFSNFGCE-EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
VG + ++ E +G V + Y + SY + + +H++ G
Sbjct: 417 --------VGMNPLIHYCNEWKGMNVNPNPYFSVRSYLEWNPDVAASGEEPCQHFLRMGG 468
Query: 516 KEGRNPD 522
+EGR D
Sbjct: 469 REGRMTD 475
>gi|118589155|ref|ZP_01546562.1| fat protein-possibly involved in cell-cell attachment [Stappia
aggregata IAM 12614]
gi|118438484|gb|EAV45118.1| fat protein-possibly involved in cell-cell attachment [Stappia
aggregata IAM 12614]
Length = 2332
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+G + +D+ +++ + Y +MT+ + + +GND ++G N+ F +GN
Sbjct: 1927 LGAGNDILDMTSDTHT----YTTDMTVDGGVGNDVIWTGAGNDTILGGEGNDTLFGGAGN 1982
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAI-----IVYDANEHKQDFLSDVERLRFADQC 350
D DG +G DT Y Y I + ++ + DA + D +S+VE RFAD
Sbjct: 1983 DRLDGGAGTDTAIYSGNWEDYDIVQNDDGSYTITDLRTDAPDGV-DTVSNVETYRFADGE 2041
Query: 351 IDSVNVKQRSI 361
+ S + R +
Sbjct: 2042 LQSDELIDRPV 2052
>gi|86988950|emb|CAJ76166.1| lipase [Pseudomonas sp. 7323]
Length = 617
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
SS+ G T+ HT + + G GND +IG N+VF +GND+ + G+DTF
Sbjct: 489 SSVKGGTGADTLKAHTTGDWLFGLDGNDHLIGGQGNDVFVGGAGNDLMESGGGIDTF--- 545
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
L+ ++ ++ Y AN+ K FL D + V Q ++L +
Sbjct: 546 ----LFSGAFGQDRVVGYQAND-KLVFLGVQGVAPNDDYRAHATTVGQDTVLTFGGDSVT 600
Query: 371 LIQV 374
L+ V
Sbjct: 601 LVGV 604
>gi|297692149|ref|XP_002823430.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-19-like
[Pongo abelii]
Length = 507
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIK--FISSN 85
R++ LT L+ T A+ R A +WS V LTF E +DI+ F
Sbjct: 103 RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTFREVQAGAADIRLSFHGRQ 162
Query: 86 NGYVCTPRYDSR----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ Y C+ +D ++FD+ + W G G L A HE+GHALGL
Sbjct: 163 SSY-CSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYHGVNLRIIAAHEVGHALGLG 221
Query: 136 H 136
H
Sbjct: 222 H 222
>gi|242279544|ref|YP_002991673.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
gi|242122438|gb|ACS80134.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
Length = 736
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK---- 317
+A T +E V G + D V+GN+ NN+ + + GND +G +G D A + + K
Sbjct: 380 MANTTSVEVVQGGTAADTVVGNAENNIIYGNGGNDTLEGGAGNDQLIGGAGADILKGGAG 439
Query: 318 --IYRFENAIIVYDANEHKQDFL 338
++ +N I+ D E +
Sbjct: 440 DDVFSADNEDILVDGGEGTDSLV 462
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI+ + +VG SG+D + G + N+V SG DV G +G+D Y A S
Sbjct: 498 GNGGNDTISGGAGNDQLVGGSGDDTLDGGADNDVLLGGSGADVLKGGAGVDVADYSASSA 557
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDL 371
+ DA + D LS++E ++ F D + N +IL ++L
Sbjct: 558 AVTVNLTAGTGTGGDA---QGDTLSEIESVQGSAFNDTIAGAAN---GNILYGGNGNDNL 611
Query: 372 IQVIGQDVFES 382
+ + G D+
Sbjct: 612 LGLGGDDILNG 622
>gi|115896326|ref|XP_785149.2| PREDICTED: similar to pre-pro-hatching enzyme [Strongylocentrotus
purpuratus]
gi|115970805|ref|XP_001189011.1| PREDICTED: similar to pre-pro-hatching enzyme [Strongylocentrotus
purpuratus]
Length = 347
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 39/99 (39%), Gaps = 29/99 (29%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFL 159
EI+FD A+ W GI G +HEIGHALGL H G YP Y
Sbjct: 222 EIHFDAAENWTVGIADGIDYVQVVVHEIGHALGLTHSGVEGSIMYPFY------------ 269
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
F P+ + D DI +Q +YG P
Sbjct: 270 -----QFRPKVELQD-----------DDIQGIQLLYGTP 292
>gi|307945682|ref|ZP_07661018.1| Na-Ca exchanger/integrin-beta4 [Roseibium sp. TrichSKD4]
gi|307771555|gb|EFO30780.1| Na-Ca exchanger/integrin-beta4 [Roseibium sp. TrichSKD4]
Length = 810
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 18/110 (16%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFF---------ESSGNDVFDGSSGLDTF---- 307
TI + + G+ GND ++G N++ F +GND+ G +G DT
Sbjct: 57 TIVGNAMNNVQFGNGGNDALVGGMGNDIQFGGEGDDLIKGGAGNDIIKGGAGADTIRGGA 116
Query: 308 -----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
Y Y I + + +V D N D L +E+L F DQ ++
Sbjct: 117 GNDVALYDGNRADYTIMKNGDMTLVIDNNTGATDNLKGIEQLAFTDQSVN 166
>gi|149925647|ref|ZP_01913911.1| Hemolysin-type calcium-binding region [Limnobacter sp. MED105]
gi|149825764|gb|EDM84972.1| Hemolysin-type calcium-binding region [Limnobacter sp. MED105]
Length = 785
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 364 YTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDR- 419
Y Y DL+Q+ G ++ ++H+ G+ EGR F YL Y DL +G +
Sbjct: 707 YWNKYPDLVQICGAGNLHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYGPNGF 766
Query: 420 GAAARHYITHGVKEGRNP 437
G A H+IT G EGR+P
Sbjct: 767 GDALHHWITVGKDEGRDP 784
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 460 PDLVQV--------GKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDR-GAAAR 508
PDLVQ+ G H+ + G EGR F YL Y DL +G + G A
Sbjct: 712 PDLVQICGAGNLHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYGPNGFGDALH 771
Query: 509 HYITHGVKEGRNP 521
H+IT G EGR+P
Sbjct: 772 HWITVGKDEGRDP 784
>gi|254422414|ref|ZP_05036132.1| Tryptophan-rich Synechocystis species C-terminal domain family
[Synechococcus sp. PCC 7335]
gi|196189903|gb|EDX84867.1| Tryptophan-rich Synechocystis species C-terminal domain family
[Synechococcus sp. PCC 7335]
Length = 720
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 16/116 (13%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-- 308
SSI G EK T + + G GND + G+S + F +GND G SG DT
Sbjct: 279 SSIAGNEKVGT----RFDDDLFGGLGNDTLTGDSGEDRLFGENGNDRLIGGSGDDTLTGG 334
Query: 309 -------YYAPSYL-YKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSV 354
++ +++ Y++ + IIV + N D LS +ER++F+D+ I+++
Sbjct: 335 AGAEDVAVFSGAFIEYELSQNSGRIIVENISGNGDGTDVLSGIERIQFSDRTINTL 390
>gi|148692667|gb|EDL24614.1| matrix metallopeptidase 19, isoform CRA_b [Mus musculus]
Length = 508
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET---------SIHSDIKFISSNN----GYVCTPRYD 95
P + A WS V LTF E S H SN G V D
Sbjct: 105 PRVRAALHQAFKYWSSVAPLTFREVKAGWADIRLSFHGRQSLYCSNTFDGPGKVLA-HAD 163
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
I+FDK ++W G +G L A HE+GHALGL H
Sbjct: 164 IPELGSIHFDKDELWTEGTYQGVNLRIIAAHEVGHALGLGH 204
>gi|109097139|ref|XP_001111542.1| PREDICTED: matrix metalloproteinase-19 isoform 1 [Macaca mulatta]
Length = 485
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 51 AQEVARWALGEWSKVVDLTFEET---------SIHSDIKFISSNN----GYVCTPRYDSR 97
A+ R A +WS V LTF E S H SN+ G V D
Sbjct: 102 ARAALRQAFQDWSNVAPLTFREVQAGGADIRLSFHGRQSLYCSNSFDGPGRVLA-HADIP 160
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
++FD+ + W G +G L A HE+GHALGL H
Sbjct: 161 ELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLGH 199
>gi|321471530|gb|EFX82502.1| hypothetical protein DAPPUDRAFT_48702 [Daphnia pulex]
Length = 225
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 25/152 (16%)
Query: 29 RYKPDVLTTHRLSFDITELNPNA---QEVARWALGEWSKVVDLTF-----EETSIHSDIK 80
R+ P T+++ TE P + +E+AR A W+ V DL F + + DI
Sbjct: 42 RHWPKKQLTYKIK-KYTEDMPKSDVDREIAR-AFQMWADVTDLAFVHVKNQSADVDIDIL 99
Query: 81 FISS--NNGYVCTPRYDSRYFM-----------EINFDKADVWRYGIGKGTILSHNALHE 127
F+S N + R+D + +FD+ + W G+GT L A HE
Sbjct: 100 FVSGEHNGEHGSCNRFDGLGHTLAHAAGPIDGGDTHFDEGETWTLDSGQGTNLFQLATHE 159
Query: 128 IGHALGLMHPGSYNGG--YPVYGVDNDYENDS 157
GH+LGL H YP Y D++ D
Sbjct: 160 FGHSLGLGHTRHVKMAVMYPYYEYQPDFKLDK 191
>gi|115733038|ref|XP_790682.2| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
gi|115935155|ref|XP_001197335.1| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
Length = 522
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 43/162 (26%)
Query: 53 EVARWALGEWSKVVDLTFEETSIHS----DIKFISS----------NNGYVCTPRYDSRY 98
E+AR A WS V LTF E + + DI+F+S G V P + Y
Sbjct: 164 EIAR-AFQLWSNVTPLTFREVNRRASADIDIRFVSGFHQDDYPFYGAMGVVGHPMVEEMY 222
Query: 99 --FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ I+ D + + + G L LH+IGHALGL H ++
Sbjct: 223 EHVVRIDVDADEQFTFDRADGINLLQVMLHQIGHALGLGH---------------SSDHI 267
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S ++ + ++P ++ + +D+ +Q IYG P
Sbjct: 268 SIMSPCVKPYIPNFTLTE-----------TDVTGIQSIYGLP 298
>gi|251825700|gb|ACT20900.1| protease [Pseudomonas aeruginosa]
Length = 126
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSY 165
HEIGH LGL HPG YN G P Y D Y D+ SVMSY
Sbjct: 86 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSY 126
>gi|119487036|ref|ZP_01620908.1| putative alkaline phosphatase [Lyngbya sp. PCC 8106]
gi|119455965|gb|EAW37099.1| putative alkaline phosphatase [Lyngbya sp. PCC 8106]
Length = 734
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF-VTFDSYLY-----LGS 491
D F Y+A++ D + A +A +++ G HF E G+F V S LY L +
Sbjct: 6 DLFNEAFYLANNPD-VEAAVEA-GIIESGFAHF----IESGQFQVRQPSPLYSELDYLAA 59
Query: 492 YDDLRN-VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQA 549
++R+ V +H+I G E RNP F L Y+ + D +N + + +
Sbjct: 60 NPNIRDAVTQGIINNGFQHFIEFGQFERRNPSPLFDTLFYLTQNPD-VNTIVN--EGILT 116
Query: 550 GKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA--- 604
+HF FG E R S+ +NP+ YL+ D+ D +HY+ G + R
Sbjct: 117 AIEHFVKFGQFEDRAPSLLYNPNYYLSQNPDVAVAVERDELTGIEHYLDIGAAQNRNFSA 176
Query: 605 -LGISGMQFKSVMNLSEKSRDKADL 628
L G F + +++ + ++ A L
Sbjct: 177 FLSPDGSPFPNQVSVGDVTQTSAIL 201
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 360 SILEYTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
S L+Y A+ ++ + Q + + +HF EFG E R+ + FD+ YL D+ +
Sbjct: 52 SELDYLAANPNIRDAVTQGIINNGFQHFIEFGQFERRNPSPLFDTLFYLTQNPDVNTIVN 111
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
A H++ G E R P Y S + + +L G +H+ + G
Sbjct: 112 EGILTAIEHFVKFGQFEDRAPSLLYNPNYYLSQNPDVAVAVERDEL--TGIEHYLDIGAA 169
Query: 477 EGRFVTFDSYL 487
+ R F ++L
Sbjct: 170 QNR--NFSAFL 178
>gi|16263827|ref|NP_436619.1| putative hemolysin-adenlyate cyclase protein [Sinorhizobium
meliloti 1021]
gi|15139951|emb|CAC48479.1| probable type I secretion target repeat protein [Sinorhizobium
meliloti 1021]
Length = 1072
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+E+V G SGND + G++ NN+F GNDV DG +G DT Y
Sbjct: 83 VENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADY 124
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++GG +++ IA+ IE++VG SG D +IG++A N F G DV DG G DT
Sbjct: 317 TVGGIAEDL-IAK---IENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDT 367
>gi|148241798|ref|YP_001226955.1| hypothetical protein SynRCC307_0699 [Synechococcus sp. RCC307]
gi|147850108|emb|CAK27602.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 345
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 240 KNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
KN I+L T W + G G ++ ++I E+V SGNDVV GN + N +GNDV
Sbjct: 181 KNRINLKTTKWQNTGDGRDRLISI------ENVNAGSGNDVVTGNRSANTLNGQNGNDVL 234
Query: 299 DGSSGLD 305
+G++G D
Sbjct: 235 NGAAGND 241
>gi|307316899|ref|ZP_07596341.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306897521|gb|EFN28265.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 1072
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+E+V G SGND + G++ NN+F GNDV DG +G DT Y
Sbjct: 83 VENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADY 124
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++GG +++ IA+ IE++VG SG D +IG++A N F G DV DG G DT
Sbjct: 317 TVGGIAEDL-IAK---IENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDT 367
>gi|303289933|ref|XP_003064254.1| hypothetical protein MICPUCDRAFT_49135 [Micromonas pusilla CCMP1545]
gi|226454570|gb|EEH51876.1| hypothetical protein MICPUCDRAFT_49135 [Micromonas pusilla CCMP1545]
Length = 3814
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
T ++ Y+ Y DLR FG + GAA RH+ HG KEGR+ +
Sbjct: 3009 ITTEEAKCYVNRYPDLRRAFGHNIGAAKRHWNKHGKKEGRDKEC 3052
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
T ++ Y+ Y DLR FG + GAA RH+ HG KEGR+ +
Sbjct: 3011 TEEAKCYVNRYPDLRRAFGHNIGAAKRHWNKHGKKEGRDKEC 3052
>gi|218438239|ref|YP_002376568.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7424]
gi|218170967|gb|ACK69700.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7424]
Length = 1067
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 28/188 (14%)
Query: 381 ESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
E + H+ + G EGRD FD+ YL ++ + + HYI G G+NP
Sbjct: 117 EPLSHYLDIGSVEGRDPHPLFDTQYYLKQNPEV----AASQINPLVHYILVGALNGKNPH 172
Query: 439 A-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDL 495
F YI + D+ + + LV H+ N G +EGR FD+ Y+ Y +L
Sbjct: 173 PLFNTAYYIEKNLDVGESGMNP--LV-----HYINHGAKEGRNPHPLFDTSYYVERYLNL 225
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
S HY+ G K+ NP+ F YI + L+ +L H+
Sbjct: 226 I----SPTINPLVHYLQQGAKQRYNPNPLFDTSFYIQQNPKLL-------ELETNPLIHY 274
Query: 555 SNFGYEEG 562
N G ++G
Sbjct: 275 INIGAKQG 282
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 74/190 (38%), Gaps = 37/190 (19%)
Query: 425 HYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--- 480
HYI HG KEGRNP F Y+ + +LI+ + LV H+ G ++ R+
Sbjct: 197 HYINHGAKEGRNPHPLFDTSYYVERYLNLISPTINP--LV-----HYLQQGAKQ-RYNPN 248
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF--KALEYIASHEDLIN 538
FD+ Y+ L + HYI G K+G NP A S DL++
Sbjct: 249 PLFDTSFYIQQNPKLLEL----ETNPLIHYINIGAKQGLNPHPLFDTAFYLKQSQTDLVH 304
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
A HF FG EGR F+ Y+ Y L + +
Sbjct: 305 HDPLA---------HFFEFGALEGRDPHPLFDTSYYVERYSQL--------IPQGMNPLV 347
Query: 597 HGMKEGRALG 606
H ++EG LG
Sbjct: 348 HYLQEGAKLG 357
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 37/261 (14%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSY 408
+ ++N K L TA Y + +G+ + H+ G EGR+ FD+ Y+ Y
Sbjct: 163 VGALNGKNPHPLFNTAYYIEKNLDVGESGMNPLVHYINHGAKEGRNPHPLFDTSYYVERY 222
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGK 467
+L S HY+ G K+ NP+ F YI + L+ +L
Sbjct: 223 LNLI----SPTINPLVHYLQQGAKQRYNPNPLFDTSFYIQQNPKLL-------ELETNPL 271
Query: 468 DHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-F 524
H+ N G ++G FD+ YL ++ D A H+ G EGR+P F
Sbjct: 272 IHYINIGAKQGLNPHPLFDTAFYLKQSQT--DLVHHDPLA---HFFEFGALEGRDPHPLF 326
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD-LYLTSY--DDLWN 581
Y+ + LI G + ++ +EG + +NP+ L+ TS+ ++
Sbjct: 327 DTSYYVERYSQLI----------PQGMNPLVHY-LQEGAKLGYNPNPLFDTSFYLEENAT 375
Query: 582 VFGSDRSAAAQHYITHGMKEG 602
+F + + HYI G ++G
Sbjct: 376 IFDLEINPLI-HYINIGFRQG 395
>gi|115667815|ref|XP_001176253.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
gi|115700134|ref|XP_783671.2| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
Length = 598
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEE----TSIHSDIKFI 82
I + +V T+ +LN NA + R A W V LTF E +S+ IKF
Sbjct: 178 IAWPRNVAVTYSFGTLTNDLNQNAIKNEIRRAFQVWDDVSGLTFREVVDSSSVDIRIKFG 237
Query: 83 SSNNG-------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
S +G + PR + +FD ++ W G GT L A HE G
Sbjct: 238 SYEHGDGISFDGQGGVLAHAFLPRNG-----DAHFDDSETWTIGTNFGTNLFQVAAHEFG 292
Query: 130 HALGLMH 136
H+LGL H
Sbjct: 293 HSLGLYH 299
>gi|325982333|ref|YP_004294735.1| hypothetical protein NAL212_1700 [Nitrosomonas sp. AL212]
gi|325531852|gb|ADZ26573.1| hypothetical protein NAL212_1700 [Nitrosomonas sp. AL212]
Length = 2008
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND+V G S N+ +GND +G G DT Y+I + + + +
Sbjct: 1652 GDTGNDIVFGGSGNDRLSGGNGNDRLNGGLGFDTAVLEGELSDYRIEINNDNVTLTQLSN 1711
Query: 333 HKQDFLSDVERLRFA 347
+ D L+D+E L+FA
Sbjct: 1712 EETDTLTDIELLQFA 1726
>gi|104779986|ref|YP_606484.1| hypothetical protein PSEEN0746 [Pseudomonas entomophila L48]
gi|95108973|emb|CAK13669.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 2432
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 221 TIYDS-----GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI+D+ GG + L +GGV N++ N +++ G Y +A ++I V+G+S
Sbjct: 401 TIHDNNTSILGGSGMSTLVRLGGVNNHVLENVAIYNNTGTYGATGNVAAGSII--VLGNS 458
Query: 276 GNDVVIGNS--ANNVFFESSGNDVFDGSSG 303
G V I NS ANNVF +S + G G
Sbjct: 459 GGTVRITNSTVANNVFLNTSTGSITSGGLG 488
>gi|330975557|gb|EGH75623.1| putative DMSO reductase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 286
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 40/208 (19%)
Query: 469 HFSNFGCEEGRFVTF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR------- 519
H+ N+G +G+ +F +YL +Y D++ + + HY T+G KE R
Sbjct: 86 HYFNYGWRQGKSPSFGFSGDMYLAAYPDVKTIDMN----PLLHYETYGKKEKRYVIPYAV 141
Query: 520 ----NPDAFKALEYIASHE-DLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
N F Y +H + A A D + KD+ N S F+ D YL
Sbjct: 142 EAIYNSTYFDDAYYQKNHNGKSTSRLASALDYITC-KDNLRN------PSEHFDADAYLE 194
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG--MQFKSVMNLSEKSRDKADLSLSF 632
SY D+ D H+ HG KE R G+S +F + N S ++S
Sbjct: 195 SYPDV----KEDGVMPLLHFELHGKKENRTAGLSNPLAKFLTYENNS---------NISH 241
Query: 633 DHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
K+V L+ Y GDG D ++ + +
Sbjct: 242 ATKRVCLFACYMGDGAIPDETIFLLEKV 269
>gi|146329811|ref|YP_001209158.1| calcium-binding domain-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146233281|gb|ABQ14259.1| calcium binding domain protein [Dichelobacter nodosus VCS1703A]
Length = 482
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 89/237 (37%), Gaps = 62/237 (26%)
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE+ H+LGL HP + P E+DS S+MSY D + F
Sbjct: 61 AAHELLHSLGLTHPFKEDNMPPHKKFLTVEEDDSMGVSIMSYQDNYDFVGAKDF------ 114
Query: 184 MVSDIVAVQKIYGAPKGS-LGNNIYKIEV-QQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ D+ + YG K + G+++Y + Q + I+D GG D D +
Sbjct: 115 RIFDLAYLHYRYGVSKTARAGDDVYSFKTFNQSCADNDIYIWDGGGIDTFDASQEEN-SV 173
Query: 242 YIDLNTESW---------------------------------SSIGGYEKNMT------- 261
Y++L SW ++G EK+
Sbjct: 174 YVNLTPGSWIYSGEKLDKFAVKENFVRDIHDFLGKDSITTEAVAVGNVEKSKINFIPTFN 233
Query: 262 -------------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I +T IE + GS+ NDV+IGN A+N F +G+D DG G D
Sbjct: 234 RILNCDFTEGQAFIGFYTQIERLKGSAFNDVLIGNKADNQIFGGAGDDKIDGGEGDD 290
>gi|258544121|ref|ZP_05704355.1| iron-regulated protein FrpC [Cardiobacterium hominis ATCC 15826]
gi|258520629|gb|EEV89488.1| iron-regulated protein FrpC [Cardiobacterium hominis ATCC 15826]
Length = 1082
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---FYYA 311
GY N T+ + + + G GNDV+ G N+ + +G+D DG +G D Y +
Sbjct: 522 GYGGNDTLHGDSGNDGLSGGYGNDVLHGGEGNDHLYGEAGHDTLDGGAGDDQLEGGIYES 581
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSV 354
+YL++ ++ + Y N+ + D L + E+ FA + D V
Sbjct: 582 DTYLFRTGHGKDTVTDYARNDEQADTLRFEGAQAEKAVFAHEGYDLV 628
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---LDTFFYYAPSYLYKIYRFENAI 325
+S+ G SG+DV+ GN N+ + +G+D DG +G L+ + +Y ++ ++ +
Sbjct: 356 DSLGGDSGDDVLHGNEGNDHLYGGAGHDTLDGGAGDDHLEGGDVESDTYQFRAGHGKDTV 415
Query: 326 IVYDANEHKQDFL----SDVERLRFADQCIDSV 354
Y N+ + D L + E+ FA + D V
Sbjct: 416 TDYAHNDEQADTLRFKGAQAEKAAFAREGYDLV 448
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---LDTFFYYAPSYLYKIYRFENAI 325
+S+ G SG+DV+ GN N+ + +G+D DG +G L+ + +Y ++ ++ +
Sbjct: 734 DSLGGDSGDDVLHGNEGNDHLYGRAGHDTLDGGAGDDHLEGGAVESDTYQFRAGHGKDTV 793
Query: 326 IVYDANEHKQDFL----SDVERLRFADQCIDSV 354
Y N+ + D L + E+ FA + D V
Sbjct: 794 KDYGYNDEQADTLRFEGAQAEKAAFAREGYDLV 826
>gi|26352221|dbj|BAC39747.1| unnamed protein product [Mus musculus]
Length = 474
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET---------SIHSDIKFISSNN----GYVCTPRYD 95
P + A WS V LTF E S H SN G V D
Sbjct: 71 PRVRAALHQAFKYWSSVAPLTFREVKAGWADIRLSFHGRQSLYCSNTFDGPGKVLA-HAD 129
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
I+FDK ++W G +G L A HE+GHALGL H
Sbjct: 130 IPELGSIHFDKDELWTEGTYQGVNLRIIAAHEVGHALGLGH 170
>gi|78189655|ref|YP_379993.1| hypothetical protein Cag_1699 [Chlorobium chlorochromatii CaD3]
gi|78171854|gb|ABB28950.1| hypothetical protein Cag_1699 [Chlorobium chlorochromatii CaD3]
Length = 593
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI--YRFENAIIVYD- 329
G GND + G +++ SG+DV DG SG+D ++ S Y+I + + V D
Sbjct: 505 GGVGNDNLYGGIDDDLLCGGSGDDVLDGGSGIDAAYFSGKSEEYRITHHPTTSMTTVVDL 564
Query: 330 -ANEHKQDFLSDVERLRFADQCI 351
A D L ++E+LRFAD+ +
Sbjct: 565 VAERDGTDNLFNIEQLRFADRTM 587
>gi|255958312|ref|NP_001157669.1| matrix metalloproteinase-19 isoform 2 [Mus musculus]
gi|74202055|dbj|BAE23019.1| unnamed protein product [Mus musculus]
Length = 455
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET---------SIHSDIKFISSNN----GYVCTPRYD 95
P + A WS V LTF E S H SN G V D
Sbjct: 52 PRVRAALHQAFKYWSSVAPLTFREVKAGWADIRLSFHGRQSLYCSNTFDGPGKVLA-HAD 110
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
I+FDK ++W G +G L A HE+GHALGL H
Sbjct: 111 IPELGSIHFDKDELWTEGTYQGVNLRIIAAHEVGHALGLGH 151
>gi|10946772|ref|NP_067387.1| matrix metalloproteinase-19 isoform 1 [Mus musculus]
gi|12585271|sp|Q9JHI0|MMP19_MOUSE RecName: Full=Matrix metalloproteinase-19; Short=MMP-19; AltName:
Full=Matrix metalloproteinase RASI; Flags: Precursor
gi|8132443|gb|AAF73292.1|AF155221_1 matrix metalloproteinase 19 [Mus musculus]
gi|11095502|gb|AAG29880.1|AF153199_1 matrix metalloproteinase 19 [Mus musculus]
gi|8886433|gb|AAF80464.1| matrix metalloproteinase-19 [Mus musculus]
gi|86577774|gb|AAI12967.1| Matrix metallopeptidase 19 [Mus musculus]
gi|148692666|gb|EDL24613.1| matrix metallopeptidase 19, isoform CRA_a [Mus musculus]
Length = 527
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET---------SIHSDIKFISSNN----GYVCTPRYD 95
P + A WS V LTF E S H SN G V D
Sbjct: 124 PRVRAALHQAFKYWSSVAPLTFREVKAGWADIRLSFHGRQSLYCSNTFDGPGKVLA-HAD 182
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
I+FDK ++W G +G L A HE+GHALGL H
Sbjct: 183 IPELGSIHFDKDELWTEGTYQGVNLRIIAAHEVGHALGLGH 223
>gi|251825698|gb|ACT20899.1| protease [Pseudomonas aeruginosa]
Length = 126
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSY 165
HEIGH LGL HPG YN G P Y D Y D+ SVMSY
Sbjct: 86 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSY 126
>gi|116073759|ref|ZP_01471021.1| hypothetical protein RS9916_34952 [Synechococcus sp. RS9916]
gi|116069064|gb|EAU74816.1| hypothetical protein RS9916_34952 [Synechococcus sp. RS9916]
Length = 1143
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN--AIIVY 328
++G +GN V+ G S N+ F G+D DG SG DT Y + I N I V
Sbjct: 804 IMGDNGNSVLKGESGNDFFEPGEGSDTVDGGSGTDTVSYKSLKAAVSIKTSTNNEKIKVS 863
Query: 329 DANEHKQDFLSDVERLR 345
D+++ D +S+VE +R
Sbjct: 864 DSSKSWTDEVSNVEIIR 880
>gi|251825702|gb|ACT20901.1| protease [Pseudomonas aeruginosa]
Length = 129
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSY 165
HEIGH LGL HPG YN G P Y D Y D+ SVMSY
Sbjct: 89 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSY 129
>gi|83313155|ref|YP_423419.1| RTX toxins and related Ca2+-binding protein [Magnetospirillum
magneticum AMB-1]
gi|82947996|dbj|BAE52860.1| RTX toxins and related Ca2+-binding protein [Magnetospirillum
magneticum AMB-1]
Length = 1352
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSA---------NNVFFESSGNDVFDGSSGLD 305
G+ N+T + H +V+G +GNDV+ G SA N+ ++GND G +G D
Sbjct: 689 GFTINVTSSAHV---TVLGGTGNDVINGGSAGEYLWGYQGNDTITGNAGNDTIVGDAGAD 745
Query: 306 TFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFAD 348
+ + Y + + V D + D L+ +E L FAD
Sbjct: 746 VAVFTGNAADYLLTTSSGTLTVTDRSGTDGTDTLTGIETLTFAD 789
>gi|297537207|ref|YP_003672976.1| Hemolysin-type calcium-binding region [Methylotenera sp. 301]
gi|297256554|gb|ADI28399.1| Hemolysin-type calcium-binding region [Methylotenera sp. 301]
Length = 1902
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 10/180 (5%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE-----SVVGSSGNDVVIGNSA 285
L+LT + + LN + G+ N T + +++ ++ G SGND++ G +
Sbjct: 671 LELTQTPAINEALKLNGAMVKNTMGFNSNGTTSDDVIVDDSASDNLSGGSGNDILFGLAG 730
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ +GNDV DG +G DT S Y + ++ + N + + L+
Sbjct: 731 NDNLSGDTGNDVLDGGTGDDTMSGGEGSDTYVVRTGSGQDVINNINNSSEAV---TDTLQ 787
Query: 346 FADQCIDSVN--VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
FAD + +Q S L D +++ Q +S +F S+G + TFD +
Sbjct: 788 FADIASTGLTSLSRQGSSLIIGYGNGDSVKLQYQFYGDSSYQVTQFKFSDGVNYTFDQLM 847
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+TV S++G++ ++++IGN+A N +GND+ DG +G DT
Sbjct: 1169 NTVAYSLIGNALDNILIGNAAVNTLNGDAGNDILDGGTGADTM 1211
>gi|209549794|ref|YP_002281711.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535550|gb|ACI55485.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 928
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS GND++ GN+ ++ +GND DG +G+DT + Y + N + +
Sbjct: 636 GSGGNDILNGNAGDDKLTGGAGNDTIDGGAGIDTALFAGNFADYSL-ALNNGDHILTSVA 694
Query: 333 HKQDFLSDVERLRFADQCID 352
D L+ VE RFAD D
Sbjct: 695 EGADTLTGVEFARFADGLYD 714
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS G+D++ GN ++ +GND DG +G+DT + Y + +N V +
Sbjct: 266 GSGGSDLINGNDGDDKLTGGAGNDTIDGGAGIDTAAFTGNFADYS-FAVDNGSRVVTSVL 324
Query: 333 HKQDFLSDVERLRFADQCID 352
D L+DVE RFAD D
Sbjct: 325 EGTDRLTDVEFARFADGVYD 344
>gi|170742132|ref|YP_001770787.1| hypothetical protein M446_3988 [Methylobacterium sp. 4-46]
gi|168196406|gb|ACA18353.1| hypothetical protein M446_3988 [Methylobacterium sp. 4-46]
Length = 521
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 32/201 (15%)
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
AS ++ V+ + E GL FD+ Y Y R S H
Sbjct: 2 ASLRSILSVVRAFRSADARSLIESGL-------FDAAWYRKRYPAARRGLVS-------H 47
Query: 426 YITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
Y+ G EG P+ F + Y ++ + A AD + + + FD
Sbjct: 48 YLASGAAEGHWPNPLFDPVWYATAYPE---AVADG--TLPILSYLRDGLATDRRPNPVFD 102
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 543
+ YL Y D+R+ R HY+ HGV++GR+P F L Y+ + D+ NA
Sbjct: 103 TRWYLERYPDVRDY----RFHPLVHYLRHGVEDGRDPSPDFSTLWYLEQNPDVRNAGEH- 157
Query: 544 PDLVQAGKDHFSNFGYEEGRS 564
LV H+ +FG EGR+
Sbjct: 158 -PLV-----HYLHFGMHEGRA 172
>gi|255958232|ref|NP_001157646.1| matrix metalloproteinase 1 isoform 1 [Tribolium castaneum]
gi|270008219|gb|EFA04667.1| matrix metalloproteinase 1 [Tribolium castaneum]
Length = 581
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
R + L+ W + YK ++ + + + E++ +E+ R A WS+ DLTF
Sbjct: 99 RAKRYALQGSRWKVKNLNYK---ISKYPKNLNTKEVD---KEIHR-AFSVWSQYTDLTFT 151
Query: 72 ET--SIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+ S H +I+F S +G Y + + +FD ++ W +GT L
Sbjct: 152 PSKGSAHIEIRFESGEHGDGDPFDGPGGTLAHAYFPVFGGDAHFDASEKWTINSYRGTNL 211
Query: 121 SHNALHEIGHALGLMH 136
A HE GH+LGL H
Sbjct: 212 FQVAAHEFGHSLGLSH 227
>gi|116252708|ref|YP_768546.1| cation-binding protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257356|emb|CAK08451.1| putative calcium-binding cadherin-like RTX protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 929
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D G N+ F +GNDV G +G+DT + Y + I+ A E K
Sbjct: 635 GHDYFFGTGGNDRFEGGAGNDVLLGGAGIDTAVFSGNFAKYTFALNNGSHILTSALEGK- 693
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L+DVE RFAD D K + + + S IQ+ + ES + GL +
Sbjct: 694 DTLTDVEFARFADGVYDF--AKGKFTPDGSNSAPTNIQLSKTSLLESTPIWTTVGLLSAK 751
Query: 396 DITFDSYLY 404
D D+ Y
Sbjct: 752 DADGDTLTY 760
>gi|291567294|dbj|BAI89566.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2218
Score = 43.1 bits (100), Expect = 0.17, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI GG+DL+ GG+ + E +++ G + N TI + + + G GND++
Sbjct: 2038 TISGGGGNDLI----FGGLGDDFIEGNEGNNTLFGNQGNDTIFGGSGDDLIYGGQGNDLI 2093
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFF 308
G S N+ F +GND G G D F
Sbjct: 2094 HGGSGNDTLFGDAGNDTIFGEEGDDLIF 2121
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
IY G+D T+ GG N + I G E N T+ + +++ G SG+D++
Sbjct: 2030 IYGGQGND----TISGGGGNDLIFGGLGDDFIEGNEGNNTLFGNQGNDTIFGGSGDDLIY 2085
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFF 308
G N++ SGND G +G DT F
Sbjct: 2086 GGQGNDLIHGGSGNDTLFGDAGNDTIF 2112
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I+ G+D L + TL G N + I G + N TI+ + + G G
Sbjct: 1994 IFGEAGNDTLIGGPGNDTLFGNQGNDLIFGGSGNDEIYGGQGNDTISGGGGNDLIFGGLG 2053
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+D + GN NN F + GND G SG D +
Sbjct: 2054 DDFIEGNEGNNTLFGNQGNDTIFGGSGDDLIY 2085
Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I + GDD++ +G ++ I L + + ++N I ++++G GND +
Sbjct: 1958 IQGTQGDDVI----VGTEEDDIILAGQGDDIVIAGDRNNLIFGEAGNDTLIGGPGNDTLF 2013
Query: 282 GNSANNVFFESSGNDVFDGSSGLDT 306
GN N++ F SGND G G DT
Sbjct: 2014 GNQGNDLIFGGSGNDEIYGGQGNDT 2038
>gi|149928498|ref|ZP_01916731.1| hypothetical protein LMED105_11710 [Limnobacter sp. MED105]
gi|149822777|gb|EDM82031.1| hypothetical protein LMED105_11710 [Limnobacter sp. MED105]
Length = 919
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 356 VKQRSILEYT----ASYEDLIQVIG--QDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
K R LE+ A + D++++ G D + + + +G S GR + FD YL
Sbjct: 662 AKWRGSLEFDMAFYAKHPDVVKMWGTNPDAYALVLDWVSWGYSRGRQGSADFDVTSYLAR 721
Query: 408 YDDLRNVFGSDR-GAAARHYITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQ 464
Y DL+ FG++ AA H++ HG EGR +P AF S A + D+V
Sbjct: 722 YPDLQRAFGANNYEAAFIHWLDHGKAEGRDGSPGAFAQTPPAGSVRVGGGGSAWSDDVVC 781
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
G+ H + + G+ V + Y G + +
Sbjct: 782 KGQ-HVTGWRVYSGKKVDRLQFRYPGGWGE 810
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFG 584
+ + A H D++ + PD D S +GY GR S F+ YL Y DL FG
Sbjct: 672 MAFYAKHPDVVKMWGTNPDAYALVLDWVS-WGYSRGRQGSADFDVTSYLARYPDLQRAFG 730
Query: 585 SDR-SAAAQHYITHGMKEGR 603
++ AA H++ HG EGR
Sbjct: 731 ANNYEAAFIHWLDHGKAEGR 750
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFG 500
+ + A H D++ + PD + D S +G GR FD YL Y DL+ FG
Sbjct: 672 MAFYAKHPDVVKMWGTNPDAYALVLDWVS-WGYSRGRQGSADFDVTSYLARYPDLQRAFG 730
Query: 501 SDR-GAAARHYITHGVKEGR--NPDAF 524
++ AA H++ HG EGR +P AF
Sbjct: 731 ANNYEAAFIHWLDHGKAEGRDGSPGAF 757
>gi|288549622|ref|ZP_05967614.2| exoprotein, RTX family [Enterobacter cancerogenus ATCC 35316]
gi|288318588|gb|EFC57526.1| exoprotein, RTX family [Enterobacter cancerogenus ATCC 35316]
Length = 5445
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 248 ESWSSIGGYEK--------------NMTIAQHT--------VIESVVGSSGNDVVIGNSA 285
++WSS GG + +T AQ+T IE V GS+ +DV GNS
Sbjct: 5241 DTWSSTGGMDVVDYINATTGVNVNLGLTTAQNTGFNTATLVNIEGVAGSNHDDVFTGNSG 5300
Query: 286 NNVFFESSGNDVFD-GSSGLDTFFY 309
+N F GND F+ GS G DT Y
Sbjct: 5301 DNQFEGRGGNDTFNIGSGGHDTLLY 5325
>gi|251825704|gb|ACT20902.1| protease [Bacillus sp. SRC-006]
Length = 124
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSY 165
HEIGH LGL HPG YN G P Y D Y D+ SVMSY
Sbjct: 84 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSY 124
>gi|260820268|ref|XP_002605457.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
gi|229290790|gb|EEN61467.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
Length = 548
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 69/145 (47%), Gaps = 25/145 (17%)
Query: 29 RYKPDVLTTHRLSFDITELNPN-AQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSN- 85
R+K + LT +R+ +L+P+ +E R WS V L F ET S ++DI S
Sbjct: 129 RWKKNDLT-YRIWNYTPDLSPSQVREAIRRGFQVWSDVTPLRFRETTSSNADINIQFSRF 187
Query: 86 ---NGYVCTPRYDSR-------YFME---INFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+GY +D R ++ E +FD + W G+ GT L HEIGHAL
Sbjct: 188 DHRDGYP----FDGRGGTLAHAFYPEDGRTHFDDDEQWTDGMYAGTNLFIVTAHEIGHAL 243
Query: 133 GLMHPGSYNGGY--PVY-GVDNDYE 154
GL H SY G P Y G D D++
Sbjct: 244 GLAH-SSYPGALMAPFYQGYDPDFK 267
>gi|251825708|gb|ACT20904.1| protease [Microbacterium sp. GZ]
Length = 130
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSY 165
HEIGH LGL HPG YN G P Y D Y D+ SVMSY
Sbjct: 90 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSY 130
>gi|89054048|ref|YP_509499.1| hypothetical protein Jann_1557 [Jannaschia sp. CCS1]
gi|88863597|gb|ABD54474.1| hypothetical protein Jann_1557 [Jannaschia sp. CCS1]
Length = 681
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 125 LHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
LHE+GHALGL HP G G P + + D + +VMSY + D ++ AT
Sbjct: 151 LHEVGHALGLKHPFDDGGTGRPNFESLGLGKFDLDMYTVMSY--SDNDTTDLAYD-PATF 207
Query: 184 MVSDIVAVQKIYGA-PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
M+ D++ +Q +YGA + GN+ Y + +D + TIYD+ G D +D
Sbjct: 208 MILDVLTLQHLYGANASQNTGNDSYTL---VRDDLY-DTIYDAAGRDAID 253
>gi|291543330|emb|CBL16439.1| Hemolysin-type calcium-binding repeat (2 copies) [Ruminococcus sp.
18P13]
Length = 888
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
++ +P +Y GDD +IGG N + I G + N TI +T ++
Sbjct: 2 IRSTQAPGDDVVYGDAGDD----AIIGGEGNDL---------IYGGDGNDTIEGNTGNDT 48
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G SGND + GN +++ + GND+ DG G D
Sbjct: 49 IYGGSGNDTITGNEGDDMLYGGDGNDMLDGGEGNDIL 85
>gi|158336324|ref|YP_001517498.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158306565|gb|ABW28182.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
Length = 1842
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N +A ++V G G D+V+GNS N++ ++GND+ DG SG DT +
Sbjct: 474 GNDVVAGGAGEDTVSGGEGQDIVLGNSGNDLMSGNAGNDIMDGGSGDDTIY 524
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 252 SIGGYEKNMTIAQHT---VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S+GGY ++++ T V + ++G GND ++GNS N+ G+D+ +G G DT F
Sbjct: 682 SLGGYLDSVSVHASTASSVNDVLMGGEGNDTILGNSGNDYLSGDQGDDILEGGLGDDTLF 741
Query: 309 YYAP 312
A
Sbjct: 742 GGAG 745
>gi|284050953|ref|ZP_06381163.1| phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
platensis str. Paraca]
Length = 723
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 445 YIASHEDLINAFADAPDL--VQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFG 500
Y+A++ D+ A A DL + G +HF G + R T +D YL + D+ +
Sbjct: 13 YLANNPDV----AQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALV- 67
Query: 501 SDRGAAA---RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ GA A +H+I G +E RNP ++ I A +A D+ +HF
Sbjct: 68 -NVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDIT--AIEHFVKA 124
Query: 558 G-YEEGR-SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
G +E+ R S+ +NP+ YL D+ D +HY+ G + R
Sbjct: 125 GQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNR 172
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y A+ D+ Q + V S +HF E G + R T +D YL + D+ + + G
Sbjct: 13 YLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALV--NVG 70
Query: 421 AAA---RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A A +H+I G +E RNP ++ I A +A D+ + +HF G E
Sbjct: 71 AIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDITAI--EHFVKAGQFE 128
Query: 478 G--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
V ++ YL D+ D HY+ G + R+ AF
Sbjct: 129 DFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAF 177
>gi|146271904|emb|CAL29436.2| interstitial collagenase [Galleria mellonella]
Length = 333
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 53 EVARWALGEWSKVVDLTFEET---SIHSDIKFISSNNG---------YVCTPRYDSRYFM 100
E+A+ A WS DLTF + +H +++F + +G Y Y
Sbjct: 53 ELAK-AFSVWSDYTDLTFTQKRSGQVHIEVRFETGEHGDGDPFDGPGGTLAHAYFPVYGG 111
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ +FD A+ W +GT L A HE GH+LGL H
Sbjct: 112 DAHFDDAETWTINSRRGTNLFQVAAHEFGHSLGLSH 147
>gi|255958234|ref|NP_001157647.1| matrix metalloproteinase 1 isoform 2 [Tribolium castaneum]
Length = 550
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
R + L+ W + YK ++ + + + E++ +E+ R A WS+ DLTF
Sbjct: 99 RAKRYALQGSRWKVKNLNYK---ISKYPKNLNTKEVD---KEIHR-AFSVWSQYTDLTFT 151
Query: 72 ET--SIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+ S H +I+F S +G Y + + +FD ++ W +GT L
Sbjct: 152 PSKGSAHIEIRFESGEHGDGDPFDGPGGTLAHAYFPVFGGDAHFDASEKWTINSYRGTNL 211
Query: 121 SHNALHEIGHALGLMH 136
A HE GH+LGL H
Sbjct: 212 FQVAAHEFGHSLGLSH 227
>gi|146271906|emb|CAL29437.2| interstitial collagenase [Galleria mellonella]
Length = 326
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 53 EVARWALGEWSKVVDLTFEET---SIHSDIKFISSNNG---------YVCTPRYDSRYFM 100
E+A+ A WS DLTF + +H +++F + +G Y Y
Sbjct: 53 ELAK-AFSVWSDYTDLTFTQKRSGQVHIEVRFETGEHGDGDPFDGPGGTLAHAYFPVYGG 111
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ +FD A+ W +GT L A HE GH+LGL H
Sbjct: 112 DAHFDDAETWTINSRRGTNLFQVAAHEFGHSLGLSH 147
>gi|291571482|dbj|BAI93754.1| phosphodiesterase/alkaline phosphatase D [Arthrospira platensis
NIES-39]
Length = 723
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 445 YIASHEDLINAFADAPDL--VQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFG 500
Y+A++ D+ A A DL + G +HF G + R T +D YL + D+ +
Sbjct: 13 YLANNPDV----AQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALV- 67
Query: 501 SDRGAAA---RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ GA A +H+I G +E RNP ++ I A +A D+ +HF
Sbjct: 68 -NVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDIT--AIEHFVKA 124
Query: 558 G-YEEGR-SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
G +E+ R S+ +NP+ YL D+ D +HY+ G + R
Sbjct: 125 GQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNR 172
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y A+ D+ Q + V S +HF E G + R T +D YL + D+ + + G
Sbjct: 13 YLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALV--NVG 70
Query: 421 AAA---RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A A +H+I G +E RNP ++ I A +A D+ + +HF +
Sbjct: 71 AIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDITAI--EHF----VKA 124
Query: 478 GRF------VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G+F V ++ YL D+ D HY+ G + R+ AF
Sbjct: 125 GQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAF 177
>gi|238623406|emb|CAS06697.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 186
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYF 166
HEIGH LGL HPG YN G P Y D DY D+ SVMSY+
Sbjct: 127 HEIGHTLGLDHPGDYNAGTGNPSY-RDADYGQDTRGYSVMSYW 168
>gi|172356113|ref|NP_001116499.1| matrix metalloproteinase 1 isoform 1 [Bombyx mori]
gi|169730452|gb|ACA64804.1| matrix metalloproteinase variant 1 [Bombyx mori]
Length = 561
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 53 EVARWALGEWSKVVDLTFEET---SIHSDIKFISSNNG---------YVCTPRYDSRYFM 100
E+A+ A WS DLTF + +H +I+F +G Y Y
Sbjct: 159 ELAK-AFSVWSDYTDLTFTQKRSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPVYGG 217
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ +FD A++W +GT L A HE GH+LGL H
Sbjct: 218 DAHFDDAEMWSINSRRGTNLFQVAAHEFGHSLGLSH 253
>gi|166365087|ref|YP_001657360.1| hypothetical protein MAE_23460 [Microcystis aeruginosa NIES-843]
gi|166087460|dbj|BAG02168.1| hypothetical protein MAE_23460 [Microcystis aeruginosa NIES-843]
Length = 1748
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIG 282
+GG D L+L+ G N I LN S S+ N+T+ + VIE+ G SGND + G
Sbjct: 1537 TGGIDTLNLS---GTNNPIRLNLGSISNQTVVTGNLTLKLSAVNVIENAFGGSGNDRITG 1593
Query: 283 NSANNVFFESSGNDVFDGSSGLD 305
NS +N GND G +G D
Sbjct: 1594 NSLSNALNGGPGNDTLSGGAGND 1616
>gi|283852348|ref|ZP_06369619.1| hypothetical protein DFW101DRAFT_2189 [Desulfovibrio sp. FW1012B]
gi|283572305|gb|EFC20294.1| hypothetical protein DFW101DRAFT_2189 [Desulfovibrio sp. FW1012B]
Length = 368
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETS---------IHSDIKFISSNNGYVCTPRYDSR 97
N N + A AL E SK+ +TF ET+ SDI + T RY
Sbjct: 210 FNQNQKAGAVEALTELSKITGITFVETTDANLANIYMFGSDIGNDVAGLADAGTQRYKIT 269
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ + R G G ++ H E+GHAL + HP + P +N+Y
Sbjct: 270 VAVNSTYSTTADLRSGTGDHELIEH----ELGHALDMKHPFQGSVQLPTAQDNNNY---- 321
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+VMSY P D+ S P DI A+Q +YG
Sbjct: 322 ---TVMSYTAPSDTWYSVSSSIYG-PY--DIAALQYMYG 354
>gi|251825712|gb|ACT20906.1| protease [Enterococcus sp. RSC]
Length = 123
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSY 165
HEIGH LGL HPG YN G P Y D Y D+ SVMSY
Sbjct: 83 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSVMSY 123
>gi|262401481|gb|ACY66641.1| matrix metalloproteinase 1 isoform 1 [Scylla paramamosain]
Length = 198
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 52 QEVARWALGEWSKVVDLTFEETS---IHSDIKFISSNNG---------YVCTPRYDSRYF 99
+E+A A W V DL F+ S +H +++F +G Y Y
Sbjct: 12 REIAA-AFQVWEDVTDLQFQRASSGKVHIEVRFEKGEHGDGDPFDGPGGTLAHAYFPIYG 70
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ +FD ++VW +GT L A HE GH+LGL H
Sbjct: 71 GDAHFDDSEVWTLRSNRGTNLFQVAAHEFGHSLGLSH 107
>gi|114761544|ref|ZP_01441459.1| VCBS [Pelagibaca bermudensis HTCC2601]
gi|114545792|gb|EAU48794.1| VCBS [Roseovarius sp. HTCC2601]
Length = 3409
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 6/139 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT----- 306
S+ G N ++ T +S+ G +G+D + G ++ GND DG SG +T
Sbjct: 911 SLAGNNGNDSMTGGTGNDSMSGGTGDDTLEGGDGDDTLVGDQGNDSLDGGSGGETSGDVA 970
Query: 307 -FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F +YL +V + D +S+VE LRF D + + +I+ T
Sbjct: 971 QFSGDRSNYLILDNGGGTLRVVDRTGTYGDDTVSNVETLRFGDGDVAVSGLTLGTIVTGT 1030
Query: 366 ASYEDLIQVIGQDVFESMK 384
+ L G D +++
Sbjct: 1031 PGADSLDGTAGDDSIDALA 1049
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 24/170 (14%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L GG N + +I G + ++A + +++ G +G+D + GN+ N+ G
Sbjct: 1234 LRGGAGNDTVRGSSYGDTIDGGADDDSLAGNNGDDTIFGGTGDDSLEGNNGNDSLLGGDG 1293
Query: 295 NDVF---------------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--AN 331
+D+F GS G D Y Y I + V + N
Sbjct: 1294 DDIFHQNAYSGTGDDTIDGGADNSGSGSDG-DVAVYRGNRGDYSIVGTATGLQVINLTGN 1352
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D + +VERLRFAD + N S++ + + L+ I D E
Sbjct: 1353 GDGTDVVYNVERLRFADGDVVVANGLTGSLVTGSPGDDSLVGTILNDTIE 1402
>gi|254414047|ref|ZP_05027815.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179183|gb|EDX74179.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 1962
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 268 IESVVGSSGNDVVIGNSANN---------VFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
IE+++ S +DV+IGN+ NN V +SGND+ DG +GLDT Y
Sbjct: 1033 IENILASQDDDVIIGNAQNNHLEGLGGNDVLIGNSGNDILDGGAGLDTISY--------- 1083
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
R NA+ V D + ++L + I S N R I + A+ +I G D
Sbjct: 1084 RRDPNAVTVNLEQGIATDGWGNSDQLYNVENVIGS-NSSDRLIGDANANT--IITGTGDD 1140
Query: 379 VFESMKHFYEFGLSEGRDITF 399
E+ EG+D F
Sbjct: 1141 WVEARNGDDIIFGEEGQDTLF 1161
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 10/58 (17%)
Query: 268 IESVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGSSGLDTFFY-YAPSYL 315
+E ++GS +DV+IGN N++ +SGND DG +G+DT Y Y PS +
Sbjct: 824 LEDIIGSPFDDVIIGNLQANSIQSLDGNDLLIGNSGNDTIDGGAGIDTISYHYDPSAV 881
>gi|172356221|ref|NP_001116500.1| matrix metalloproteinase 1 isoform 2 [Bombyx mori]
gi|169730454|gb|ACA64805.1| matrix metalloproteinase variant 2 [Bombyx mori]
Length = 538
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 53 EVARWALGEWSKVVDLTFEET---SIHSDIKFISSNNG---------YVCTPRYDSRYFM 100
E+A+ A WS DLTF + +H +I+F +G Y Y
Sbjct: 159 ELAK-AFSVWSDYTDLTFTQKRSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPVYGG 217
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ +FD A++W +GT L A HE GH+LGL H
Sbjct: 218 DAHFDDAEMWSINSRRGTNLFQVAAHEFGHSLGLSH 253
>gi|166367965|ref|YP_001660238.1| hypothetical protein MAE_52240 [Microcystis aeruginosa NIES-843]
gi|166090338|dbj|BAG05046.1| probable Chi protein [Microcystis aeruginosa NIES-843]
Length = 910
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D+ G D L+ ++L + + ++ +T+A+ T E+V+G S ND ++
Sbjct: 696 LIDALGTDTLNFAATTTKTINLNLGSTAAQTVTAGNLTLTLARATAFENVIGGSLNDTIL 755
Query: 282 GNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
GNS N +GN D+ GS GLDT Y
Sbjct: 756 GNSLVNSLTGGAGNDSLTGGLGKDILTGSDGLDTLNY 792
>gi|332289841|ref|YP_004420693.1| RTX toxin GtxA [Gallibacterium anatis UMN179]
gi|330432737|gb|AEC17796.1| RTX toxin GtxA [Gallibacterium anatis UMN179]
Length = 2038
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 24/139 (17%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII- 326
IE+++G+SGND +IGN +N+ + G+D+ +G SG D S + K+Y + A I
Sbjct: 1775 IENIIGTSGNDNLIGNHKDNILIGNDGDDILEGYSGNDVL--AGGSGINKLYGGQGADIY 1832
Query: 327 ---------VYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++D ++ L + E L+F D+V T S+ I
Sbjct: 1833 LLSTNATNYIFDLTKNNLAKLENSEDLNLQFTKDSDDNV----------TLSFNKDGNTI 1882
Query: 376 GQDVFESMKHFYEFGLSEG 394
G+ + E F F + +G
Sbjct: 1883 GKTIIEKASQFGTFSIGDG 1901
>gi|83645367|ref|YP_433802.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83633410|gb|ABC29377.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 3483
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 21/165 (12%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T++D + LLD+ LIGG + ++ GY + ++ ++++G+ G D +
Sbjct: 2013 TVWDK--ETLLDMALIGG---------DGDETLIGYSTDDILSGAGGADTLLGNDGADSL 2061
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + + +GNDV G +G D LY+ R + ++ DAN
Sbjct: 2062 SGGAGADDLQGGAGNDVLAGDAGDDKLAGGLGDDLYRFSRGDGKDVITDANG-------- 2113
Query: 341 VERLRFADQCIDSVNVKQR--SILEYTASYEDLIQVIGQDVFESM 383
+R+ F D +V V++ +++ +D + + GQ + E +
Sbjct: 2114 TDRIEFTDVASTAVRVRREGGNLVISVPGSDDQVTITGQYLGEQL 2158
>gi|146386384|gb|ABQ23980.1| membrane-type 5 matrix metalloproteinase [Oryctolagus cuniculus]
Length = 198
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 79/218 (36%), Gaps = 75/218 (34%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y + H + + EL+ ++ R A W KV LTFEE H
Sbjct: 11 LTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTFEEVPYHE 63
Query: 77 -------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADVWRYGIGK 116
+DI ++ + + +D YF + +FD + W G
Sbjct: 64 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNAN 123
Query: 117 --GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-------- 166
G L A+HE+GHALGL H ND +++M+ F
Sbjct: 124 HDGNDLFLVAVHELGHALGLEH-----------------SNDP--SAIMAPFYQYMETHN 164
Query: 167 --MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 165 FKLPQD----------------DLQGIQKIYGPPAEPL 186
>gi|118580784|ref|YP_902034.1| Ig family protein [Pelobacter propionicus DSM 2379]
gi|118503494|gb|ABK99976.1| Ig family protein [Pelobacter propionicus DSM 2379]
Length = 2954
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
GY TI+ +++ G GND++ +++ +G+D+ G +G DT+ + S
Sbjct: 1737 GYATADTISGFGGNDAIYGLGGNDILSSGDGDDILTGGAGDDILSGDAGSDTYLFSPGSG 1796
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
IY F DA+ K D L E LR AD I N
Sbjct: 1797 RDTIYNF-------DASSGKTDALVLGEGLRAADIDISRTN 1830
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++G +N+T+ + I G++ N+V+IGNS N +GND DG +G DT A
Sbjct: 2770 TLGANLENLTLVGTSAINGT-GNTLNNVLIGNSVVNSLSGGTGNDTLDGGAGADTLTGGA 2828
Query: 312 PSYLYKIYR-FENAIIV 327
+ Y + R + N IIV
Sbjct: 2829 GNDTYLLGRGYGNDIIV 2845
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 252 SIGGYEKNMT----IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+I G + N T + ++T+I+ G +GND + GNS N+ +G+D +G +G DT
Sbjct: 1577 AIAGTDDNDTLQAWVGENTIIQ---GLAGNDALFGNSGNDTLVGGAGDDALNGGAGSDT- 1632
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
YL+ + I YD K D L + L D
Sbjct: 1633 ------YLFGRGAGHDVINNYDTGAGKTDALVLADDLHATD 1667
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++G +N+T+ + I G++ ++++ GNSA N +GND+ DG +G D A
Sbjct: 2590 TLGANVENLTLTGTSAINGT-GTTLDNMLTGNSAINTLTGGAGNDILDGGAGADKLIGGA 2648
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+Y + + +I +ANE S V
Sbjct: 2649 GDDIYIVDNTAD-VITENANEGTDTVKSGV 2677
>gi|313114034|ref|ZP_07799588.1| hypothetical protein HMPREF9436_01443 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623654|gb|EFQ07055.1| hypothetical protein HMPREF9436_01443 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 337
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
DL + G + ++ ++HF G+ EGR TF+ Y + DL FG D HYI
Sbjct: 267 DLAALFGDNQWKYLEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVAAFGDDNAKYYEHYI 326
Query: 428 THGVKEGR 435
+ G EGR
Sbjct: 327 SSGKAEGR 334
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 552 DHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+HF N G +EGR S TFN Y + DL FG D + +HYI+ G EGR
Sbjct: 281 EHFVNSGMKEGRQGSSTFNLAAYKANNPDLVAAFGDDNAKYYEHYISSGKAEGR 334
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 468 DHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+HF N G +EGR TF+ Y + DL FG D HYI+ G EGR
Sbjct: 281 EHFVNSGMKEGRQGSSTFNLAAYKANNPDLVAAFGDDNAKYYEHYISSGKAEGR 334
>gi|281353246|gb|EFB28830.1| hypothetical protein PANDA_004065 [Ailuropoda melanoleuca]
Length = 455
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIK--FISSN 85
R++ LT L+ T A+ A WS V LTF E +DI+ F
Sbjct: 46 RWRKKHLTFRILNLPSTLPPHTARAALLQAFRYWSNVAPLTFREVQAGWADIRLSFHGRQ 105
Query: 86 NGYVCTP---------RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ Y P D ++FD+ ++W G G L A HE+GHALGL H
Sbjct: 106 SPYCSKPFDGPGRVLAHADIPELGSVHFDEDELWTEGTSGGVNLRIIAAHELGHALGLGH 165
>gi|145219250|ref|YP_001129959.1| hypothetical protein Cvib_0435 [Prosthecochloris vibrioformis DSM
265]
gi|145205414|gb|ABP36457.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
Length = 7428
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V G +G+D + G N+ +GNDV DG +GL+T + + Y I + + +
Sbjct: 2611 DTVSGGTGDDTLYGEGGNDTLTGGAGNDVIDGGTGLNTVNFSSSYASYTIGEQGDTVSLS 2670
Query: 329 DANEHKQDFLSDVERLRFADQCI 351
+ D +++V+ L F+D+ +
Sbjct: 2671 VSGPDGTDVVTNVDILHFSDKDV 2693
>gi|320103847|ref|YP_004179438.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
gi|319751129|gb|ADV62889.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
Length = 555
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 221 TIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ G+D+L DL LIGGV N S+ G + + T+A + +VG
Sbjct: 289 TLAGGAGNDVLAGGAGADL-LIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGG 347
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G+D++ G N++ F GND G SG DT F
Sbjct: 348 DGDDILFGGDGNDILFGGDGNDALAGGSGDDTLF 381
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ G DL+DLT T + G + + T+ + +++ G +GNDV+
Sbjct: 252 IFTGAGSDLVDLT-----------GTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLA 300
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFF 308
G + ++ GND G +G D+ F
Sbjct: 301 GGAGADLLIGGVGNDSLSGGAGQDSLF 327
>gi|301760460|ref|XP_002916079.1| PREDICTED: matrix metalloproteinase-19-like [Ailuropoda
melanoleuca]
Length = 547
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIK--FISSN 85
R++ LT L+ T A+ A WS V LTF E +DI+ F
Sbjct: 104 RWRKKHLTFRILNLPSTLPPHTARAALLQAFRYWSNVAPLTFREVQAGWADIRLSFHGRQ 163
Query: 86 NGYVCTP---------RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ Y P D ++FD+ ++W G G L A HE+GHALGL H
Sbjct: 164 SPYCSKPFDGPGRVLAHADIPELGSVHFDEDELWTEGTSGGVNLRIIAAHELGHALGLGH 223
>gi|294055575|ref|YP_003549233.1| hypothetical protein Caka_2045 [Coraliomargarita akajimensis DSM
45221]
gi|293614908|gb|ADE55063.1| hypothetical protein Caka_2045 [Coraliomargarita akajimensis DSM
45221]
Length = 16477
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-TVIESV 271
+ D+ I T+ GG+D +D + IG + S+I E+ +TIAQ VI S+
Sbjct: 9571 ETDTLVINTV---GGNDTIDASAIG-----------ASSTITTDEQTITIAQTDQVIVSL 9616
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
VG GND +IG N+ G+D G G+DTF
Sbjct: 9617 VGGEGNDRLIGTPFNDFLDSGLGDDRVTGGYGMDTF 9652
>gi|291567288|dbj|BAI89560.1| hemolysin-type calcium-binding region protein [Arthrospira platensis
NIES-39]
Length = 1254
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 79/205 (38%), Gaps = 23/205 (11%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL GG N + +SI G N +I ++V GND V G NN+ F
Sbjct: 1007 DDTLFGGEGNDTIEGSAGDNSIFGGAGNDSIIAGPGNDTVFAGPGNDQVYGGDGNNLIFG 1066
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SGND G SG DT A S L N + E D ++D F D
Sbjct: 1067 DSGNDTLYGGSGDDTISGGAGSDLLTGDSGNNVFYYLNPGEGV-DIITD-----FKDPGN 1120
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----------TFDS 401
D + IL ++E L+ +G SEG DI TFD+
Sbjct: 1121 D-----RFLILSGENNFEGLVPTVGTAAAPLQSAIISALGSEGTDISGRQLIIFQDTFDN 1175
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHY 426
+ + L+N GSD G+A Y
Sbjct: 1176 IQAVNAA--LKNQRGSDGGSALILY 1198
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
P ++ G+D++D GG N L E SI G N +I + I S+ G
Sbjct: 851 GPGNDSLVGGSGNDVID----GGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFGEG 906
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G+D +IG N+ GND G +G DT F
Sbjct: 907 GDDTIIGGDDGNLLSGGVGNDSLTGGTGNDTIF 939
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 20/160 (12%)
Query: 250 WSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
W IG G N T+ + ++ G GND ++G ++ F GND +GS+G
Sbjct: 966 WGGIGRDLIQGGPGNDTLIGGSGNNTIFGGLGNDSIVGGKGDDTLFGGEGNDTIEGSAGD 1025
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
++ F A + I V+ + Q + D L F D D++ Y
Sbjct: 1026 NSIFGGAGN--DSIIAGPGNDTVFAGPGNDQVYGGDGNNLIFGDSGNDTL---------Y 1074
Query: 365 TASYEDLIQ-VIGQDVFESMKH---FYEFGLSEGRDITFD 400
S +D I G D+ FY EG DI D
Sbjct: 1075 GGSGDDTISGGAGSDLLTGDSGNNVFYYLNPGEGVDIITD 1114
>gi|163748214|ref|ZP_02155513.1| hypothetical protein OIHEL45_19891 [Oceanibulbus indolifex HEL-45]
gi|161378513|gb|EDQ02983.1| hypothetical protein OIHEL45_19891 [Oceanibulbus indolifex HEL-45]
Length = 382
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETS--IHSDIKF----ISSNNGYVCTPR-YDSRYF- 99
NP Q + R A W V+++ F E + SD++ I G + T + Y S+
Sbjct: 41 NPTYQALIRDAFQAWENVINIDFVEVADGAQSDLRLGWDSIDGAYGVIGTAQSYLSKTSS 100
Query: 100 -------MEINFDKADVW---RYGIGKGTILSHNALHEIGHALGLMH 136
EI FD A+ W + G L ALHEIGH +GL+H
Sbjct: 101 TLYSVTEAEIRFDLAENWSTSKTAPGGAVNLYTTALHEIGHTMGLLH 147
>gi|72382575|ref|YP_291930.1| hypothetical protein PMN2A_0736 [Prochlorococcus marinus str. NATL2A]
gi|72002425|gb|AAZ58227.1| hypothetical protein PMN2A_0736 [Prochlorococcus marinus str. NATL2A]
Length = 1543
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 219 IQTIYDSGGDD--LLDLTLIGGVKNYIDLNTESWSSIG--------GYEKNMTIAQHTVI 268
I+ SG +D +LD T + K I W I G E + T +++
Sbjct: 1212 IKEAATSGTEDATVLDPTAVALDKKPISEVAYPWQEIDDLKKPQGDGAELDSTSHWASLV 1271
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S G+D + G ++ F G+D DG G D FY YK R ++ + +
Sbjct: 1272 KSK--DDGDDRLEGGETSDKIFGGLGSDFIDGGEGEDVAFYAGNFADYKFDRTKDTVAIQ 1329
Query: 329 DANE---HKQDFLSDVERLRFADQCID 352
D E D L +VE ++FADQ +D
Sbjct: 1330 DQREGLNDGNDTLKNVEYIQFADQKVD 1356
>gi|313681718|ref|YP_004059456.1| hemolysin-type calcium-binding region [Sulfuricurvum kujiense DSM
16994]
gi|313154578|gb|ADR33256.1| Hemolysin-type calcium-binding region [Sulfuricurvum kujiense DSM
16994]
Length = 2393
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V + GND + + N+ F +G+D G SG DT Y Y I R VY
Sbjct: 2182 DTVGSAGGNDRIFAEAGNDTVFGGTGDDFMHGGSGNDTVTYDGNRGDYVITRDNGKTYVY 2241
Query: 329 DANEHKQDFLSDVERLRFAD 348
+ + D + + E ++FAD
Sbjct: 2242 TVSTGETDTVVNAESIQFAD 2261
>gi|117618784|ref|YP_857965.1| hypothetical protein AHA_3491 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560191|gb|ABK37139.1| flagellin hook IN motif family [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 5047
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GGDD L GG N I ++ G N T+ + +++ G SG+D +
Sbjct: 4857 LFGQGGDDFL----FGGAGNDILFGGAGNDTLYGESGNDTLYGGSGNDTLYGGSGDDTLS 4912
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFY 309
G N++ GND+ G G DTF +
Sbjct: 4913 GGLGNDILVGGLGNDILKGDGGADTFTW 4940
>gi|166367829|ref|YP_001660102.1| hypothetical protein MAE_50880 [Microcystis aeruginosa NIES-843]
gi|166090202|dbj|BAG04910.1| hypothetical protein MAE_50880 [Microcystis aeruginosa NIES-843]
Length = 1225
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D+ G D L+ ++L + ++ +T+A T E+V+G S ND ++
Sbjct: 892 LIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLNDNIV 951
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDANEHKQDFLS 339
GN+ N +GND G G DT A +YL+ + + DA S
Sbjct: 952 GNTLANSLNGGAGNDTLSGLGGNDTLDGGAGNDTYLFDTDLVLGSDRLIDA--------S 1003
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ L FA ++N+ S + T + +L
Sbjct: 1004 GIDTLNFAATTTKTINLNLGSTVAQTVTAGNL 1035
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D+ G D L+ ++L + ++ +T+A T E+V+G S ND ++
Sbjct: 999 LIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLNDNIV 1058
Query: 282 GNSANNVFFESSGNDVFDGSSGLD 305
GN+ N +GND +G +G D
Sbjct: 1059 GNTLANSLNGGAGNDTLNGGAGND 1082
>gi|307944841|ref|ZP_07660179.1| hemolysin-type calcium-binding region [Roseibium sp. TrichSKD4]
gi|307772055|gb|EFO31278.1| hemolysin-type calcium-binding region [Roseibium sp. TrichSKD4]
Length = 6021
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 235 LIGGV---------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
L+GG+ + ++++ ++ ++ GG + T+ T IE ++GSS +D ++G+SA
Sbjct: 642 LVGGIGSDIADYQGSDAVNVDLQAGTATGGDAQGDTL---TSIEGLIGSSNDDTLLGSSA 698
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
NN +GND+ G G +T A + E+AI
Sbjct: 699 NNTISGGAGNDIIAGVGGTNTLRGDAGDDTFTGGLGEDAI 738
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+V GS+ +D +IG++A+NV G+D +G G DT A S Y NA +
Sbjct: 779 LENVTGSAFDDTLIGSTADNVLSGGDGDDYLEGGQGADTLSGGAGSDTVS-YETANAAVQ 837
Query: 328 YD-------ANEHKQDFLSDVERL---RFADQCIDSVNVKQ------RSILEYTASYEDL 371
D ++ D LS +E L + D+ + + +L+ A +DL
Sbjct: 838 VDLSTGTATGSDATGDTLSSIENLVGSAYGDELTGDASDNRFEGGAGDDVLQGGAGADDL 897
Query: 372 IQVIGQDVFE 381
I G DV +
Sbjct: 898 IGGAGFDVAD 907
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-- 325
+E+++GS D + GNS+ N GND+ DG +G DT A + A+
Sbjct: 4656 VETLIGSDHADTLTGNSSANTISGGDGNDIIDGGAGSDTLSGGAGNDTLSYASTAGAVTA 4715
Query: 326 -IVYDANEHKQDFLSDVERLRFAD 348
+ +AN+ + D +S E L +D
Sbjct: 4716 NLATNAND-QGDTISGFENLTGSD 4738
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E++ GSS +D + GN+ +NV +G D G G+DT Y S R + +
Sbjct: 533 VENLTGSSFSDTLTGNTGDNVLEGGAGADTLTGGGGVDTAAYTQSS---AGVRVDLSTGD 589
Query: 328 YDANEHKQDFLSDVERLRFA---DQCI-DSVNVK-----QRSILEYTASYEDLIQVIGQD 378
+ + + D L+ + LR + DQ D + + +L A ++L+ IG D
Sbjct: 590 HSGGDAEGDVLTGITNLRGSVYDDQLTGDGADNRLEGGDGNDLLHGGAGADELVGGIGSD 649
Query: 379 VFE 381
+ +
Sbjct: 650 IAD 652
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G V IDL S ++ GG T++ IE+ G+ D + GN+ N GND
Sbjct: 1345 GSVAVVIDL--ASGTASGGDADGDTLSS---IENATGTDHADTLTGNADKNTLIGGGGND 1399
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENA---IIV-----YDANEHKQ-DFLSDVERLRFA 347
V DG + DT +EN+ +IV AN Q D LS +E + +
Sbjct: 1400 VLDGGANADTLI---GGDGIDTVTYENSAGNVIVNLASGTGANGDAQGDILSQIENVIGS 1456
Query: 348 DQCIDSVNVKQR-SILEYTASYEDLI------QVIGQDVFESMK 384
DQ D + R ++L A Y+ L Q+IG D ++++
Sbjct: 1457 DQS-DVIEGDFRDNVLTGGAGYDTLTGNEGDDQLIGGDGNDTLR 1499
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ IGG + T+ T IE++ GS+ +D ++GN++ N +GNDV +G G DT
Sbjct: 1885 TGIGGSAQGDTL---TDIENLTGSAFHDHLVGNTSANTLTGGAGNDVLEGRGGADTLIGG 1941
Query: 311 APSYLYKIYRFENAIIVYD-------ANEHKQDFLSDVERLRFAD 348
+ Y N+ + + + + D LS++E + +D
Sbjct: 1942 TGTDTAD-YSASNSAVTVNLETGMGTGGDAEGDTLSEIEEVIGSD 1985
>gi|163742500|ref|ZP_02149886.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis 2.10]
gi|161384085|gb|EDQ08468.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis 2.10]
Length = 413
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT LHEIGH LGL H S++GG + D D+ +VM+Y +
Sbjct: 130 KGTYGYVTVLHEIGHTLGLQH--SHDGGLTL-----DRHTDTPENTVMTY--------NH 174
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
S Y DI A+Q +YG G ++I D I++ S T+
Sbjct: 175 SPAYVTELGTFDIQAMQHLYGNSDSFTG---WEILGGGSDPIIIRSTDAS-------ETV 224
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
IG +N + G E + T+ +++VG G D + G + ++ +G
Sbjct: 225 IGTDQNTTINAKGGHDHVQGREADDTLRGADGRDTMVGGLGEDRLFGGNGADLLIGGTGG 284
Query: 296 DVFDGSSGLDTFF 308
D + G S D +
Sbjct: 285 DAYSGGSDDDVLY 297
>gi|170717778|ref|YP_001784843.1| hypothetical protein HSM_1523 [Haemophilus somnus 2336]
gi|168825907|gb|ACA31278.1| hypothetical protein HSM_1523 [Haemophilus somnus 2336]
Length = 170
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S++GG E E+ G S +D++ G + G+D DG G D +
Sbjct: 50 STLGGIENITKTDDIDYSETNFGGSDDDMLYGGDGADTLLGEGGDDYLDGGEGEDVAEFS 109
Query: 311 APSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFAD 348
YKI + + +++ D + + DFL ++E+L F D
Sbjct: 110 GNFADYKITKMGDGLLISDTKQGRDGTDFLRNIEKLNFKD 149
>gi|332706925|ref|ZP_08426985.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332354190|gb|EGJ33670.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 457
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
V+ SGND V G S N+ F SSGND+ DG SG D+ F
Sbjct: 126 VIAGSGNDFVSGGSGNDFVFGSSGNDILDGGSGNDSLF 163
>gi|227357928|ref|ZP_03842273.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
gi|227161873|gb|EEI46898.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
Length = 392
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT---SVMSYFMPQDSMMDASFG--Y 179
+HE+GHALGLMH Y + +ND+ LT SVM+Y + DA F Y
Sbjct: 288 IHELGHALGLMHINVY---------LKNIKNDAILTYKYSVMAYQFA--DIKDADFAGLY 336
Query: 180 CATPMVSDIVAVQKIYGAPKGS-LGNNIY 207
T M+ DI+ +Q +YG + L NN Y
Sbjct: 337 PMTFMLVDILLLQYLYGPNMTTRLENNTY 365
>gi|17233320|ref|NP_490410.1| hypothetical protein alr7304 [Nostoc sp. PCC 7120]
gi|17135842|dbj|BAB78388.1| alr7304 [Nostoc sp. PCC 7120]
Length = 4936
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 227 GDDLLDLTLIG---------GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
GD L +L LIG ++N I N + + + G N TI +++ G SGN
Sbjct: 4750 GDHLENLILIGNSPIDGTGNALRNNITGNVAN-NILSGGADNDTIISGDGDDTLYGDSGN 4808
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
D + G + N++ G+D G +G DTF + AP
Sbjct: 4809 DTLTGGNGNDILVGGMGSDRLTGGNGKDTFAFSAP 4843
>gi|283464606|gb|ADB22829.1| GtxA [Gallibacterium anatis]
Length = 2026
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 24/139 (17%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII- 326
IE+++G+SGND +IGN +N+ + G+D+ +G SG D S + K+Y + A I
Sbjct: 1763 IENIIGTSGNDNLIGNHKDNILIGNDGDDILEGYSGNDVL--AGGSGINKLYGGQGADIY 1820
Query: 327 ---------VYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++D ++ L + E L+F D+V T S+ I
Sbjct: 1821 LLSTNATNYIFDLTKNNLAKLENSEDLNLQFTKDSDDNV----------TLSFNKDGNTI 1870
Query: 376 GQDVFESMKHFYEFGLSEG 394
G+ + E F F + +G
Sbjct: 1871 GKTIIEKSSQFGTFSIGDG 1889
>gi|301611320|ref|XP_002935198.1| PREDICTED: matrix metalloproteinase-23-like [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 55/179 (30%)
Query: 58 ALGEWSKVVDLTFEETSIH--SDIK--FISSNN----GYVCTPRYD------SRYFM--- 100
A WSKV LTF+ H SD++ F + N+ G P +D + F+
Sbjct: 101 AFRMWSKVSSLTFQRVQSHQVSDLRIGFYTFNHSDCWGSPLHPCFDGLNGELAHAFLPPR 160
Query: 101 -EINFDKADVW-----RYGIGKGTI---LSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
EI+FD + W R+ +G L A HEIGHALGL H
Sbjct: 161 GEIHFDNHEFWVLGPSRFSWKQGVWYNDLVQVAAHEIGHALGLWH--------------- 205
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
S +T++M +A++ DI+A+Q +YG P S G+ Y +E
Sbjct: 206 ----SSNVTALMH--------PNATYTRIRHVTKDDIMAIQSLYGCP--SSGSRCYSLE 250
>gi|190895183|ref|YP_001985476.1| putative hemolysin-type calcium-binding protein [Rhizobium etli
CIAT 652]
gi|190700844|gb|ACE94926.1| putative hemolysin-type calcium-binding protein [Rhizobium etli
CIAT 652]
Length = 1253
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ +S+ GS G+DV+IG N++ ++ SG+D+ DG +G DT + +
Sbjct: 772 GGSGNDTLVGAGGNDSLFGSGGSDVLIGGEGNDILYDESGDDILDGGNGDDTMSDFGGAV 831
Query: 315 LYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
N + AN D SD + L + + + I YT S E ++
Sbjct: 832 ASLSGGAGNDAMWTGANMTGSVDGGSDRDVLFVTGGNLTGLAISNVEI--YTTSAEFVLG 889
Query: 374 VIGQ-DVFESMKHF 386
+ Q D F+++ F
Sbjct: 890 TVAQLDGFDTITTF 903
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G N T+ +S+ GS G+DV+IG N++ ++ SG+D+ DG +G DT
Sbjct: 966 GGSGNDTLVGAGGSDSLFGSGGSDVLIGGEGNDILYDESGDDILDGGNGDDTM 1018
>gi|170744535|ref|YP_001773190.1| hypothetical protein M446_6498 [Methylobacterium sp. 4-46]
gi|168198809|gb|ACA20756.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 120
Score = 42.0 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL +Y D+ G D HY+T G KEGR+P A F Y++++
Sbjct: 26 FDPVFYLATYPDVAE-HGCD---PLEHYLTFGWKEGRDPSAQFSTSGYLSAN-------- 73
Query: 542 DAPDLVQAGKD---HFSNFGYEEGRS 564
PD+ +AG + H+ G EGRS
Sbjct: 74 --PDVAEAGINPLVHYRMHGLAEGRS 97
Score = 38.5 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 18/85 (21%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL +Y D+ G D HY+T G KEGR+P A F Y++++
Sbjct: 26 FDPVFYLATYPDVAE-HGCD---PLEHYLTFGWKEGRDPSAQFSTSGYLSAN-------- 73
Query: 458 DAPDLVQVGKD---HFSNFGCEEGR 479
PD+ + G + H+ G EGR
Sbjct: 74 --PDVAEAGINPLVHYRMHGLAEGR 96
>gi|209528057|ref|ZP_03276536.1| Phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
maxima CS-328]
gi|209491513|gb|EDZ91889.1| Phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
maxima CS-328]
Length = 723
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 445 YIASHEDLINAFADAPDL--VQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFG 500
Y+A++ D+ A A DL + G +HF G + R T +D YL + D+ +
Sbjct: 13 YLANNPDV----AQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALV- 67
Query: 501 SDRGAAA---RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ GA A +H+I G +E R+P ++ + I A +A D+ +HF
Sbjct: 68 -NVGAIASGFQHFINFGQREARDPSILFNTDFYINEYPFIQAAIEAGDIT--AIEHFVKA 124
Query: 558 G-YEEGR-SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
G +E+ R S+ +NP+ YL D+ D +HY+ G + R
Sbjct: 125 GQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNR 172
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y A+ D+ Q + V S +HF E G + R T +D YL + D+ + + G
Sbjct: 13 YLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALV--NVG 70
Query: 421 AAA---RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A A +H+I G +E R+P ++ + I A +A D+ + +HF +
Sbjct: 71 AIASGFQHFINFGQREARDPSILFNTDFYINEYPFIQAAIEAGDITAI--EHF----VKA 124
Query: 478 GRF------VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G+F V ++ YL D+ D HY+ G + R+ AF
Sbjct: 125 GQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAF 177
>gi|115667817|ref|XP_001176394.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
gi|115700136|ref|XP_001176086.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
Length = 595
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEE----TSIHSDIKFI 82
I + +V T+ +LN NA + R A W V LTF E +S+ IKF
Sbjct: 175 IAWPRNVAVTYSFGTLTNDLNQNAIKNELRRAFQVWVDVSGLTFREVVDSSSVDIRIKFG 234
Query: 83 SSNNG-------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
S +G + PR + +FD ++ W G GT L A HE G
Sbjct: 235 SYEHGDGISFDGQGGVLAHAFLPRNG-----DAHFDDSESWTIGTNFGTNLFQVAAHEFG 289
Query: 130 HALGLMH 136
H+LGL H
Sbjct: 290 HSLGLYH 296
>gi|83582767|ref|YP_425073.1| hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
gi|83578083|gb|ABC24633.1| Hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
Length = 830
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
+ F++ YL +Y D+ + A+A HY G KE RNP++ F A Y A + D++N
Sbjct: 3 LAFNATYYLTAYPDVAKAVSLGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVLN 62
Query: 455 AFADA--PDLVQVGKDHFSNFGCEEGR-----FVTFDSYLYLGSYDDL-RNVFGSDRGAA 506
A ++ P + HF +G E R F+ YL + D+ V +A
Sbjct: 63 AVSNGAFPSVWA----HFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAVTAGSMPSA 118
Query: 507 ARHYITHGVKEGR 519
H++ GV EGR
Sbjct: 119 LYHFLAFGVDEGR 131
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
F++ YL +Y D+ + A+A HY G KE RNP++ F A Y A + D++NA
Sbjct: 5 FNATYYLTAYPDVAKAVSLGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVLNAV 64
Query: 541 ADA--PDLVQAGKDHFSNFGYEEGRS-----ITFNPDLYLTSYDDL-WNVFGSDRSAAAQ 592
++ P + HF +G E R+ FN YL + D+ V +A
Sbjct: 65 SNGAFPSVWA----HFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAVTAGSMPSALY 120
Query: 593 HYITHGMKEGR 603
H++ G+ EGR
Sbjct: 121 HFLAFGVDEGR 131
>gi|307308175|ref|ZP_07587890.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|306901378|gb|EFN31983.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 1072
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+V G SGND + G++ NN+ GNDV DG +G DT Y + + +
Sbjct: 83 VENVYGGSGNDTITGDAQNNLIRGGGGNDVLDGGAGNDTADYTDKTTSVVVTLAGATLAT 142
Query: 328 YDANEHKQDFLSDVERL 344
N +D +S+ E +
Sbjct: 143 VFVNGIAEDTISNFENV 159
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT--FFY 309
++GG +++ IA+ IE++VG SG D +IG++A N F G DV DG G DT F
Sbjct: 317 TVGGIAEDL-IAK---IENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTADFSD 372
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
S + + +AI +D + ++E +
Sbjct: 373 KVQSVVLALNGAVDAIAAV--GGTAEDTVRNIENI 405
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 263 AQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-APSYLYKIY 319
A+ TV IE++ G SGND G++A N F G DV DG G DT Y + L
Sbjct: 395 AEDTVRNIENITGGSGNDQFTGDAAANTFRGGLGADVLDGGDGSDTADYGDKTASLVVTL 454
Query: 320 RFENAIIVYDANEHKQDFLSDVERL 344
N V+ + +D L ++E +
Sbjct: 455 NGANPATVF-VGGNAEDTLRNIENI 478
>gi|149201942|ref|ZP_01878916.1| Nidogen, extracellular region [Roseovarius sp. TM1035]
gi|149144990|gb|EDM33019.1| Nidogen, extracellular region [Roseovarius sp. TM1035]
Length = 936
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + I + +VG++ ND + N+ ++ +GND+ DG +G DT + + Y
Sbjct: 2 EGLVIPGTPEADDLVGTADNDTITANAGDDTLTGGAGNDLLDGGAGFDTAVFAGNAADYS 61
Query: 318 IYRFENA--IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
E+A I + A D L +++RL+F N+ +L + LI+ +
Sbjct: 62 TGVNESAQRTITHTAT-GDTDILVNIQRLQFD-------NISTDVLLNPDNTSPGLIRGL 113
Query: 376 GQDV 379
G D
Sbjct: 114 GGDA 117
>gi|72382573|ref|YP_291928.1| hypothetical protein PMN2A_0734 [Prochlorococcus marinus str. NATL2A]
gi|72002423|gb|AAZ58225.1| hypothetical protein PMN2A_0734 [Prochlorococcus marinus str. NATL2A]
Length = 1821
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG--------GYEKNMTIAQHTVIESVVGSSGNDVVIG 282
LD T + K I W I G E + T ++++S G+D + G
Sbjct: 1504 LDPTAVALDKKPISEVAYPWQEIDDLKKPQGDGAELDSTSHWASLVKSK--DDGDDRLEG 1561
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE---HKQDFLS 339
++ F G+D DG G D FY YK R ++ + + D E D L
Sbjct: 1562 GETSDKIFGGLGSDFIDGGEGEDVAFYAGNFADYKFDRTKDTVAIQDQREGLNDGNDTLK 1621
Query: 340 DVERLRFADQCID 352
+VE ++FADQ +D
Sbjct: 1622 NVEYIQFADQKVD 1634
>gi|297537209|ref|YP_003672978.1| Ig family protein [Methylotenera sp. 301]
gi|297256556|gb|ADI28401.1| Ig family protein [Methylotenera sp. 301]
Length = 3249
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++G +N+T+ T I G++ ++V+ GN+ANN GND +G +G DT
Sbjct: 2605 TLGNALENLTLTGTTAINGT-GNALDNVLTGNTANNTLIGGDGNDTLNGGTGADTMSGGL 2663
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
LY + N I++ +A+E + V AD
Sbjct: 2664 GDDLYIVDNV-NDILIENADEGYDTVQTSVTLTGLADNI 2701
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G E ++ ++++G +G+DV+ N+ N++ +GND+ DG GLDT+ +
Sbjct: 1575 TVSGTEGADSLIGGKASDTLLGGAGDDVLTANAGNDLLDGGAGNDMLDGGVGLDTYVF 1632
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
TV + VG+ N+ ++GN+A N G+DV G +G DT + LY + N I
Sbjct: 2709 TVAINAVGNGLNNTMVGNAAANKLEGGDGDDVISGGAGADTMVGGNGNDLYTVDNV-NDI 2767
Query: 326 IVYDANEHKQDFL 338
++ D N D++
Sbjct: 2768 VIEDVNGGDSDWI 2780
>gi|330862952|emb|CBX73087.1| hypothetical protein YEW_HI32550 [Yersinia enterocolitica W22703]
Length = 449
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+IGG N I + ++ G N I H +S+ G GND++IG N+ +G
Sbjct: 116 VIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAG 175
Query: 295 NDVFDGSSGLDTF 307
ND+ DG G D
Sbjct: 176 NDILDGGDGNDQL 188
>gi|49036110|gb|AAT48728.1| lipase [Pseudomonas fluorescens]
Length = 617
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T+ SS+ G T+ + + G GND +IG + N+VF +GND+ + G DT
Sbjct: 485 TQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLLESGGGADT 544
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F L+ ++ ++ Y AN+ K FL L D + V Q ++L++ A
Sbjct: 545 F-------LFSGAFGQDRVVGYTAND-KLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGA 596
Query: 367 SYEDLIQV 374
L+ V
Sbjct: 597 DSVTLVGV 604
>gi|218506165|ref|ZP_03504043.1| Cadherin [Rhizobium etli Brasil 5]
Length = 178
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV G +++F ++GND+FDG++G DT +Y Y + +N + + + D
Sbjct: 22 DVKTG-GGDDLFTGTAGNDIFDGNAGTDTAIFYGNFANYS-FATDNGAHILTSEQEGMDT 79
Query: 338 LSDVERLRFADQCID 352
L D+E RFAD D
Sbjct: 80 LRDIELARFADGVYD 94
>gi|17568533|ref|NP_510440.1| defective HatCHing family member (hch-1) [Caenorhabditis elegans]
gi|57012923|sp|Q21059|NAS34_CAEEL RecName: Full=Zinc metalloproteinase nas-34; AltName:
Full=Defective hatching protein 1; AltName:
Full=Nematode astacin 34; Flags: Precursor
gi|1374685|dbj|BAA12861.1| HCH-1 [Caenorhabditis elegans]
gi|6435513|emb|CAB61002.1| C. elegans protein F40E10.1, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 605
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 31/139 (22%)
Query: 18 LRDQYWSN--------YFIRYKPDVLT--THRLSFDI-------TELNPNA--QEVARWA 58
+RDQYW+ Y IR K + + + R SF + + +N NA VA+W
Sbjct: 102 VRDQYWARKSSTNEFLYAIRGKRSMTSFLSERWSFPVPYYIDTSSGVNTNAVLAGVAKWE 161
Query: 59 LGEWSKVVDL-TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
++ L ++ +S + ++FIS N Y + SR+ +++ IG G
Sbjct: 162 QETCARFTRLNSYSSSSRQNALRFISGNGCYSNIGKV-SRFPQDVS----------IGWG 210
Query: 118 TILSHNALHEIGHALGLMH 136
HEIGHALG H
Sbjct: 211 CTSLGTVCHEIGHALGFYH 229
>gi|194214001|ref|XP_001490302.2| PREDICTED: matrix metallopeptidase 11 (stromelysin 3) [Equus
caballus]
Length = 472
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFI 82
R++ LT L F + ++ AL WS+V LTF E H+DI ++
Sbjct: 88 RWEKTELTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHEGHADITIDFTRYW 147
Query: 83 SSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N G + + + E ++FD + W G +GT L A HE GH LGL
Sbjct: 148 HGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQVAAHEFGHVLGL 207
Query: 135 MH 136
H
Sbjct: 208 QH 209
>gi|189424584|ref|YP_001951761.1| glycosyl transferase family 2 [Geobacter lovleyi SZ]
gi|189420843|gb|ACD95241.1| glycosyl transferase family 2 [Geobacter lovleyi SZ]
Length = 857
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 71/185 (38%), Gaps = 37/185 (20%)
Query: 383 MKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-A 439
+ HF EFG E R FD LY+ Y D VF S HY+ G EGR P
Sbjct: 141 LLHFIEFGAREFRVPHPLFDPCLYVSQYPD---VFNSGMNLL-EHYVRFGGDEGRRPHWL 196
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR------FVTFDSYLYLGSYD 493
F A Y+ + P++ G ++ C GR F+ YL Y
Sbjct: 197 FHAQAYLEHY----------PEIRGSGMTPLEHY-CRYGRGSVYQVHQLFNPVFYLSRYV 245
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D+ SD HY+ G EGR+P + S E F PDL +AG +
Sbjct: 246 DVLE--QSDNPLI--HYLVTGADEGRDPSS------TFSTESYRKQF---PDLKRAGINP 292
Query: 554 FSNFG 558
+F
Sbjct: 293 LVHFA 297
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
V FDS YL +Y ++ + G D HY+ HGV +P F Y+ +
Sbjct: 81 VLFDSAFYLHNYPEI-ALAGMD---PVIHYLEHGVSGYYDPHPLFSTRWYLKLY------ 130
Query: 540 FADAPDLVQAGKD---HFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
PD+ +G + HF FG E R F+P LY++ Y D++N +HY
Sbjct: 131 ----PDVAASGINPLLHFIEFGAREFRVPHPLFDPCLYVSQYPDVFN----SGMNLLEHY 182
Query: 595 ITHGMKEGR 603
+ G EGR
Sbjct: 183 VRFGGDEGR 191
>gi|62464786|ref|YP_220409.1| hypothetical protein p49879_1p32 [Leptospirillum ferrooxidans]
gi|60739087|gb|AAX36053.1| ORF289 [Leptospirillum ferrooxidans]
Length = 289
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
T S + + S DD R +FGSD G AAR I++ +KE + P A + L +
Sbjct: 22 TISSTVVVKSIDDFRELFGSDVGDAARADISNALKEQKEPGATRMLPQVG 71
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
T S + + S DD R +FGSD G AAR I++ +KE + P A + L +
Sbjct: 22 TISSTVVVKSIDDFRELFGSDVGDAARADISNALKEQKEPGATRMLPQVG 71
>gi|332289985|ref|YP_004420837.1| Hemolysin-type calcium-binding repeat protein [Gallibacterium
anatis UMN179]
gi|330432881|gb|AEC17940.1| Hemolysin-type calcium-binding repeat protein [Gallibacterium
anatis UMN179]
Length = 2274
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G S +D + G + ++ SG+D DG SG DT + Y+I + E I++ D
Sbjct: 802 IYGGSDDDKLYGGAGDDALVGDSGDDFIDGGSGDDTAEFSGKFEEYEITKLEGGILIKDK 861
Query: 331 NEHK--QDFLSDVERLRFAD 348
+ + DFL +VE+ F D
Sbjct: 862 VQGRDGSDFLINVEKAAFTD 881
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 221 TIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ D+ GG D++++ + G +DL+ + I N+ + + + IE V+ GND
Sbjct: 1509 TLQDTDGGFDVVNVAAMNG-NMLVDLH----AGIADLNGNILLIKDSQIEGVISGDGNDH 1563
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFF-YYAPSYLYKIYRFENAIIVYDAN--EHKQD 336
++GN+ +N+ G+D +G++G DT + L F+ ++ +AN + D
Sbjct: 1564 LVGNALDNLLIGGRGDDQLEGAAGNDTLYGAQGNDTLTGGDGFDTFVVNKNANTTDTITD 1623
Query: 337 FLSDVERLRFAD 348
F V+RL A+
Sbjct: 1624 FKVGVDRLILAE 1635
>gi|148242012|ref|YP_001227169.1| hypothetical protein SynRCC307_0913 [Synechococcus sp. RCC307]
gi|147850322|emb|CAK27816.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 666
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 27/157 (17%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
KN I+LNT W + G + IE+V GND+V GN +N +G DV +
Sbjct: 501 KNRINLNTTKWQNTGDGRDRLV-----SIENVNAGGGNDIVTGNKFSNRLNGQNGRDVLN 555
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------------------QDFLS 339
G G D + + + ++ N+H +DF
Sbjct: 556 GGGGNDVLLGGGGNDQLRGGSGNDRLVGNQGNDHLWGGAGRDTFVLSEGSGYDRIRDFRD 615
Query: 340 DVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVI 375
V+R++ +D++ +K R+ Y DL+ V+
Sbjct: 616 GVDRIQVG-AGVDNLRIKNHRNGHAYVYEGRDLMAVV 651
>gi|110680257|ref|YP_683264.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
gi|109456373|gb|ABG32578.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
Length = 2666
Score = 42.0 bits (97), Expect = 0.38, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G G D+++G + N+V G DV DG +GLDT Y + I A ++
Sbjct: 1078 LAGRGGADILLGEAGNDVLIGGLGADVLDGGAGLDTASYADSTTSIFIREVPGAQMLGFR 1137
Query: 331 NEHKQDFLSDVERL 344
E + D L D+ER+
Sbjct: 1138 GEAQGDVLIDIERI 1151
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ ++GS GND + G + N++ +GNDV +G +G DT F
Sbjct: 2364 DELIGSDGNDEINGEAGNDILRGGAGNDVIEGGAGDDTVF 2403
>gi|262276071|ref|ZP_06053880.1| type I secretion target repeat protein [Grimontia hollisae CIP
101886]
gi|262219879|gb|EEY71195.1| type I secretion target repeat protein [Grimontia hollisae CIP
101886]
Length = 715
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
I G E N TI T +++ G +GNDV++GN+ +++ + G+D+ G SG D +
Sbjct: 450 IEGNEGNDTIRGGTGNDTIYGGAGNDVLLGNAGDDILYGGEGDDILRGGSGSDLLY 505
>gi|284052786|ref|ZP_06382996.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 635
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 79/205 (38%), Gaps = 23/205 (11%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL GG N + +SI G N +I ++V GND V G NN+ F
Sbjct: 388 DDTLFGGEGNDTIEGSAGDNSIFGGAGNDSIIAGPGNDTVFAGPGNDQVYGGDGNNLIFG 447
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SGND G SG DT A S L N + E D ++D F D
Sbjct: 448 DSGNDTLYGGSGDDTISGGAGSDLLTGDSGNNVFYYLNPGEGV-DIITD-----FKDPGN 501
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----------TFDS 401
D + IL ++E L+ +G SEG DI TFD+
Sbjct: 502 D-----RFLILSGENNFEGLVPTVGTAAAPLQSAIISALGSEGTDISGRQLIIFQDTFDN 556
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHY 426
+ + L+N GSD G+A Y
Sbjct: 557 IQAVNAA--LKNQRGSDGGSALILY 579
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
P ++ G+D++D GG N L E SI G N +I + I S+ G
Sbjct: 232 GPGNDSLVGGSGNDVID----GGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFGEG 287
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G+D +IG N+ GND G +G DT F
Sbjct: 288 GDDTIIGGDDGNLLSGGVGNDSLTGGTGNDTIF 320
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 20/160 (12%)
Query: 250 WSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
W IG G N T+ + ++ G GND ++G ++ F GND +GS+G
Sbjct: 347 WGGIGRDLIQGGPGNDTLIGGSGNNTIFGGLGNDSIVGGKGDDTLFGGEGNDTIEGSAGD 406
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
++ F A + I V+ + Q + D L F D D++ Y
Sbjct: 407 NSIFGGAGN--DSIIAGPGNDTVFAGPGNDQVYGGDGNNLIFGDSGNDTL---------Y 455
Query: 365 TASYEDLIQ-VIGQDVF---ESMKHFYEFGLSEGRDITFD 400
S +D I G D+ FY EG DI D
Sbjct: 456 GGSGDDTISGGAGSDLLTGDSGNNVFYYLNPGEGVDIITD 495
>gi|163738105|ref|ZP_02145521.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis BS107]
gi|161388721|gb|EDQ13074.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis BS107]
Length = 413
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT LHEIGH LGL H S++GG + D D+ +VM+Y +
Sbjct: 130 KGTYGYVTVLHEIGHTLGLQH--SHDGGLTL-----DRHADTPENTVMTY--------NH 174
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
S Y DI A+Q +YG G ++I D I++ S T+
Sbjct: 175 SPAYVTELGTFDIQAMQHLYGNSDSFTG---WEILGGGSDPIIIRSTDAS-------ETV 224
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
IG +N + G E + T+ +++VG G D + G + ++ +G
Sbjct: 225 IGTDQNTTINAKGGHDHVQGREADDTLRGADGRDTMVGGLGEDRLFGGNGADLLIGGTGG 284
Query: 296 DVFDGSSGLDTFF 308
D + G S D +
Sbjct: 285 DAYSGGSDDDVLY 297
>gi|89068815|ref|ZP_01156198.1| calcium binding hemolysin protein, putative [Oceanicola granulosus
HTCC2516]
gi|89045585|gb|EAR51648.1| calcium binding hemolysin protein, putative [Oceanicola granulosus
HTCC2516]
Length = 10858
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 198 PKGSLGNNIYKIEVQQKD------SPFIQTIYD---SGGDDLLDLTLIGGVKNYIDLNTE 248
P+ + G+N+Y+IEV +D + + T+ D GG +TL GG
Sbjct: 10362 PQDADGDNVYEIEVAAEDGRDDDRATILVTVTDVVEDGGP----ITLTGGAGRD------ 10411
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ +GG E N+ + ++++G+ G+D + G ++ F +G+D+ DG SG D
Sbjct: 10412 --TLVGGDEPNL-LEGLGGRDALIGNGGDDSLFGGRGDDDLFGGAGDDLLDGGSGGDDLE 10468
Query: 309 YYAPSYLYKIYRFE 322
A + I FE
Sbjct: 10469 GGAGDDTFLIRGFE 10482
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 227 GDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D D TL +GG+ IDL + S GG + T++ IE + GS +D + G++A
Sbjct: 8040 GTDTADYTLSLGGIS--IDLAAGTAS--GGDAEGDTLSG---IEIIQGSFHDDSLTGDAA 8092
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+N F S G D G G+DT Y ++ + A A E D LS +ERL
Sbjct: 8093 DNTFRGSRGADTMAGGDGIDTADY---AFADEAVAVNLATGQGTAGEAAGDVLSGIERL 8148
>gi|226941651|ref|YP_002796725.1| outer membrane adhesin like proteiin [Laribacter hongkongensis HLHK9]
gi|226716578|gb|ACO75716.1| putative outer membrane adhesin like proteiin [Laribacter
hongkongensis HLHK9]
Length = 2392
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++++G GNDV++G S N+ +GND+ G SG+DTF +
Sbjct: 2243 DTLLGGHGNDVLLGGSGNDTLTGGAGNDILIGGSGVDTFVW 2283
>gi|218670181|ref|ZP_03519852.1| putative rhizobiocin [Rhizobium etli GR56]
Length = 193
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++IE+V SGND ++GN A+N + ++GND G +G DT
Sbjct: 84 SLIENVWAGSGNDTIVGNEADNTLWGNAGNDTLTGDAGNDTL 125
>gi|90411764|ref|ZP_01219773.1| type I secretion target repeat protein [Photobacterium profundum
3TCK]
gi|90327326|gb|EAS43690.1| type I secretion target repeat protein [Photobacterium profundum
3TCK]
Length = 1573
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N T+A +++ G GND + G+S N++ F SG+DV DG +G+D F +
Sbjct: 1367 GGDDNDTLAGGDNDDNLDGGIGNDTLYGDSGNDLLFGQSGDDVLDGGAGIDQLFAGSG-- 1424
Query: 315 LYKIYRFENAIIVYDANE 332
N +++D N+
Sbjct: 1425 --------NDTLIFDKND 1434
>gi|126661259|ref|ZP_01732331.1| hypothetical protein CY0110_14465 [Cyanothece sp. CCY0110]
gi|126617451|gb|EAZ88248.1| hypothetical protein CY0110_14465 [Cyanothece sp. CCY0110]
Length = 54
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 389 FGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
G +EGRD +FD+ YL +Y D+R+ +G +A HYI+ G EGR
Sbjct: 1 MGAAEGRDQHSFDAAQYLQNYADIRDAYGLSAKSATEHYISSGFVEGRT 49
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 473 FGCEEGRFV-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
G EGR +FD+ YL +Y D+R+ +G +A HYI+ G EGR
Sbjct: 1 MGAAEGRDQHSFDAAQYLQNYADIRDAYGLSAKSATEHYISSGFVEGRT 49
>gi|40063620|gb|AAR38409.1| type I secretion target GGXGXDXXX repeat protein [uncultured marine
bacterium 582]
Length = 2447
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD----LLDLTLIGGVKNYIDLNTESWSSIG 254
G LG+++Y ++ ++ + T SGG D + LTL V+N + + G
Sbjct: 467 SGGLGDDVYIVD----NASDVVTEAASGGTDEVRSSVTLTLETNVENLTLTGAANIAGTG 522
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N+ I ++ ++ G SGND + G S N+ + SGND DG G DT +
Sbjct: 523 NSLNNV-ITGNSGNNTLYGGSGNDTLYGGSGNDTLYGGSGNDRIDGGEGNDTIDGGSGDD 581
Query: 315 LYKIYRFENAIIVYDANE-HKQDFLSDVERLRFADQCI 351
++ + II ++ + DFL +E++ D +
Sbjct: 582 IFDASSGADTIIGGRGDDTYCVDFLGPIEQVSIEDSKL 619
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD---------LLDLTLIGGVKNYIDLNT-E 248
KG GN+ Y ++ D + DS G D LLD + GV+N T +
Sbjct: 2002 KGGDGNDTYVVDSSTDDK-----VTDSSGTDEIQSSVQYTLLDAS---GVENLTLTGTND 2053
Query: 249 SWSS-------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
SW + I G + N + +++ G+ G+D + G + +GND+ G
Sbjct: 2054 SWGTGNVKANVITGNDGNNMLKGLKGTDTLAGAKGDDSLEGGDGTDSLVGGAGNDLMSGG 2113
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+G+DTF A I F+ A DA+ DF+
Sbjct: 2114 NGMDTFAEVAGDGSDTISDFKEA----DADGKGGDFI 2146
>gi|332160892|ref|YP_004297469.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325665122|gb|ADZ41766.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 483
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+IGG N I + ++ G N I H +S+ G GND++IG N+ +G
Sbjct: 150 VIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAG 209
Query: 295 NDVFDGSSGLDTF 307
ND+ DG G D
Sbjct: 210 NDILDGGDGNDQL 222
>gi|254463780|ref|ZP_05077191.1| type I secretion target repeat protein [Rhodobacterales bacterium
Y4I]
gi|206684688|gb|EDZ45170.1| type I secretion target repeat protein [Rhodobacterales bacterium
Y4I]
Length = 414
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 135/346 (39%), Gaps = 70/346 (20%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS----SNNGYVCTPRYDSRYFMEI 102
+ +E R AL E+ + + F ETS + I S G+ P + S Y
Sbjct: 59 FDSQQREYFRRALDEFEEASGVIFVETSGPAMINVFGYDGGSAAGWADYP-WASSY--ST 115
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
N + + I G+ LHEIGHALGL HP ++ D+ L
Sbjct: 116 NEGRLAIEGGNIMPGSFGYETVLHEIGHALGLKHP---------------HDGDTTLADH 160
Query: 163 MSYFMPQDSMMDASF-GYCATPMVS-DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
+ +++M S+ GY T + + D+ A+Q IYG+ S G + + V+ I
Sbjct: 161 LD--TQANTVMTYSYAGYYVTELGTFDVQALQHIYGS---SAGTAEWSVRVKSGGMVVID 215
Query: 221 T---------------IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
T +Y GG D L LIGG L+T IGGY ++
Sbjct: 216 TSAAAETVLAVGQSSKVYGRGGSDTLIGREAGDKLIGGAG----LDTL----IGGYGEDR 267
Query: 261 TIAQH---TVIESV-----VGSSGN-DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I + GS+G D ++G + +G+D G +G D
Sbjct: 268 LFGGKGADVLIGGLDDDEYSGSTGEADKLVGGGGWDTLSGGAGDDTLVGGNGRDRLIGGD 327
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV----ERLRFADQCIDS 353
S R + + A+ ++Q+ ++D +++ F+ +DS
Sbjct: 328 GSDQLTGGRHADTFVFVSADYYEQEVITDFGVGGDKIEFSGTSVDS 373
>gi|159027694|emb|CAO89559.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1463
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 199 KGSLGNNIYKIEVQQK-DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ GN+IY S IQ +GG D LD T G + +N ++
Sbjct: 1232 AGANGNDIYCFNASTPLGSDTIQETT-TGGIDTLDFT---GTNTAVRVNLGITTNQTAVT 1287
Query: 258 KNM--TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N+ T + + IE+++G SGND + GNS NN GND G G D+
Sbjct: 1288 NNLRLTFSANNTIENIIGDSGNDRLTGNSLNNTLTGGGGNDQLTGQDGNDSLI 1340
>gi|46204238|ref|ZP_00050284.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 491
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+PD YL Y DL V G DR QHY+ HG EGR
Sbjct: 1 FDPDFYLRYYPDL-AVLGDDRKVLRQHYLKHGKGEGR 36
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------------FK 525
FD YL Y DL V G DR +HY+ HG EGR P A F
Sbjct: 1 FDPDFYLRYYPDL-AVLGDDRKVLRQHYLKHGKGEGRFPSADALVAALEGEGGRLPKDFI 59
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL 579
A Y A +EDL A+ +L + H+ FG EGR+ Y Y+ +
Sbjct: 60 AEHYRALYEDLAG-MAEPWELAE----HYLRFGRWEGRAYRAELSAYELEYERM 108
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 51/127 (40%), Gaps = 25/127 (19%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------------FK 441
FD YL Y DL V G DR +HY+ HG EGR P A F
Sbjct: 1 FDPDFYLRYYPDL-AVLGDDRKVLRQHYLKHGKGEGRFPSADALVAALEGEGGRLPKDFI 59
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL--RNVF 499
A Y A +EDL A+ +L + H+ FG EGR + Y Y+ + R
Sbjct: 60 AEHYRALYEDLAG-MAEPWELAE----HYLRFGRWEGRAYRAELSAYELEYERMVAREAE 114
Query: 500 GSDRGAA 506
R AA
Sbjct: 115 AGRRSAA 121
>gi|28900806|ref|NP_800461.1| hypothetical protein VPA0951 [Vibrio parahaemolyticus RIMD 2210633]
gi|28809252|dbj|BAC62294.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 487
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
F T+ DSG D I + + + E +SI G E + +++ G +G+
Sbjct: 297 FTLTLNDSGTD-------IAQTERHASVGDEFANSITGGESIDILLGQAGEDTLSGGAGD 349
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+++G N++ G+D+ G G+DTF + S R + I + +E K D
Sbjct: 350 DILVGGLGNDILTGGLGSDILTGGEGIDTFTFTQESLDMTSSR--DVIKDFRLDEDKLD- 406
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQ 377
LSD+ F D D N+ + +Y ++ + L + + G+
Sbjct: 407 LSDILEF-FGDDTTDMDNLLEHVSADYDSAQDTLNLTITGE 446
>gi|296273027|ref|YP_003655658.1| hemolysin-type calcium-binding region [Arcobacter nitrofigilis DSM
7299]
gi|296097201|gb|ADG93151.1| Hemolysin-type calcium-binding region [Arcobacter nitrofigilis DSM
7299]
Length = 3735
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 24/143 (16%)
Query: 221 TIYDSGGDDLLDLTLIGG----VKNY------IDLNTESWSSIGGYEKNMTIAQHTVIES 270
TI+ S G D+LD GG N+ I++N E+ + GY + TI E+
Sbjct: 3133 TIFASSGIDILD----GGEGIDTINFSNSNVGININLENNTLSSGYAQGDTIVN---FEN 3185
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG++ +D + G++ +N+ GN++ +G+ G+DT + L Y+ N + +D
Sbjct: 3186 IVGTNSDDNITGDTNDNIISALGGNNIINGNDGIDTVVFSGK--LLDYYKNGNIVTNFDG 3243
Query: 331 -----NEHKQDFLSDVERLRFAD 348
+ + L++VE+++F D
Sbjct: 3244 TATVFTDSGINELTNVEKIQFDD 3266
>gi|77458911|ref|YP_348417.1| lipase, class 3 [Pseudomonas fluorescens Pf0-1]
gi|77382914|gb|ABA74427.1| lipase [Pseudomonas fluorescens Pf0-1]
Length = 617
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T+ SS+ G T+ + + G GND +IG + N+VF +GND+ + G DT
Sbjct: 485 TQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADT 544
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F L+ ++ ++ Y AN+ K FL L D + V Q ++L++ A
Sbjct: 545 F-------LFNGAFGQDRVVGYTAND-KLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGA 596
Query: 367 SYEDLIQV 374
L+ V
Sbjct: 597 DSVTLVGV 604
>gi|318604797|emb|CBY26295.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica Y11]
Length = 483
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+IGG N I + ++ G N I H +S+ G GND++IG N+ +G
Sbjct: 150 VIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAG 209
Query: 295 NDVFDGSSGLDTF 307
ND+ DG G D
Sbjct: 210 NDILDGGDGNDQL 222
>gi|110681127|ref|YP_684134.1| iron-regulated protein frpC, putative [Roseobacter denitrificans
OCh 114]
gi|109457243|gb|ABG33448.1| iron-regulated protein frpC, putative [Roseobacter denitrificans
OCh 114]
Length = 548
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFE 322
E+V G+ ND +IGN +NV +GNDV G +G DTF F+ + + I FE
Sbjct: 436 ENVTGTDFNDTIIGNDQDNVIRGGAGNDVMSGGAGADTFVFFEEDAGVDIILDFE 490
>gi|119486359|ref|ZP_01620418.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119456572|gb|EAW37702.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 476
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 29/153 (18%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G++GND + G + ++ S GND DG G+DT Y S L ++ + A+ V
Sbjct: 47 DTLSGNAGNDTLDGGNGDDELIGSRGNDTLDGGDGVDTANY---SELGEVITLQ-AVGVV 102
Query: 329 DANEHKQDFLSDVERLRFA---DQCIDS-----------VNVKQRSIL--------EYTA 366
D QD + ++E + A D ID +++ + S+ +
Sbjct: 103 DKGNAGQDQIENIEAIIGANGQDNIIDGTVSGGGTSAFDIDLSEESLTVTNIPGLGDVNF 162
Query: 367 SYEDLIQVIG---QDVFESMKHFYEFGLSEGRD 396
+ E+ + VIG D + EFG S G D
Sbjct: 163 TVENFVNVIGTSNTDTITGDSNENEFGGSRGND 195
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 21/149 (14%)
Query: 185 VSDIVAVQKIYGAPKGSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY- 242
+ +++ +Q + KG+ G + I IE I +G D+++D T+ GG +
Sbjct: 90 LGEVITLQAVGVVDKGNAGQDQIENIEA---------IIGANGQDNIIDGTVSGGGTSAF 140
Query: 243 -IDLNTESWSSI---GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
IDL+ ES + G + N T+ +V+G+S D + G+S N F S GND +
Sbjct: 141 DIDLSEESLTVTNIPGLGDVNFTVENFV---NVIGTSNTDTITGDSNENEFGGSRGNDSY 197
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
DG G DT Y S L + E +V
Sbjct: 198 DGKGGNDTVDY---SDLGQAVTLERGGVV 223
>gi|254426342|ref|ZP_05040058.1| Peptidase M10 serralysin C terminal family [Synechococcus sp. PCC
7335]
gi|196187756|gb|EDX82722.1| Peptidase M10 serralysin C terminal family [Synechococcus sp. PCC
7335]
Length = 589
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 90/241 (37%), Gaps = 65/241 (26%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS----VMSYFM-PQDSMMDASFGY 179
+HEIGHALGL H + D DS+L S VMSY ++
Sbjct: 196 MHEIGHALGLTHSHETHANL-------DGPMDSWLDSKEFTVMSYKAHVGGELIPNPVDE 248
Query: 180 CATP---MVSDIVAVQKIYGAP-KGSLGNNIYKIEV-------------QQKDSPFIQTI 222
P M+ DI A+Q +YGA GN Y + +++ +TI
Sbjct: 249 VDQPQSLMMYDIAAIQAMYGANFDTRSGNTTYTFSTSTGEMFANGQSLGKPENNTIFRTI 308
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSI---------------GGYEKNMTIA---- 263
+D G D D + G ++ I+L +WS + GG
Sbjct: 309 WDGNGRDTYDFSNTGRSQS-INLRPGAWSDLSADSTAQNARLKIEWGGVVTKRARGHIAN 367
Query: 264 --QH-----TVIESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTF 307
QH ++IE+ G G+D + GN A N + + G ND DG S D
Sbjct: 368 ALQHNDDPRSLIENAKGGGGSDTIQGNIARNHLYGNVGDDRLWGWDNNDTLDGGSEDDLL 427
Query: 308 F 308
F
Sbjct: 428 F 428
>gi|119490760|ref|ZP_01623092.1| lipoprotein receptor-related protein [Lyngbya sp. PCC 8106]
gi|119453744|gb|EAW34902.1| lipoprotein receptor-related protein [Lyngbya sp. PCC 8106]
Length = 3477
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
IY DD + D T+ G + + E + G + N TI+ ++ + + G G
Sbjct: 3290 IYGGKNDDQVRGGAQDDTMFGNLGADLIEGNEDNDILFGNQDNDTISGNSEQDFIYGGQG 3349
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLD 305
ND++ GNS ++V F +G+D DG G D
Sbjct: 3350 NDLLDGNSGDDVLFGDNGDDTLDGGEGDD 3378
>gi|115668714|ref|XP_786545.2| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
gi|115931871|ref|XP_001182435.1| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
Length = 526
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 53/208 (25%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTF 70
R + L D W +K D+ T RL +L ++ +E+ AL WS LTF
Sbjct: 96 RARRYALSDVKW------FKTDL--TWRLENTTPDLRRSSVREIIARALKHWSDASQLTF 147
Query: 71 EET-SIHSDI--KFISSNNG-------------YVCTPRYDSRYFM--EINFDKADVWRY 112
E S +D+ KF S ++G + P + RY + + +FD+A+ +
Sbjct: 148 REVQSGDADLLMKFTSRDHGDGNPFDGSGKVLAHAFFPTSERRYSIAGDAHFDEAETYTD 207
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
GT L A+HE GH+LGL H + D+ + ++ ++P +
Sbjct: 208 NSYAGTNLFQVAVHEFGHSLGLGHSNN---------------PDAIMAAIYRGYVPNAEL 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ DI +Q +YGA G
Sbjct: 253 RE-----------DDIAGIQALYGANSG 269
>gi|326334119|ref|ZP_08200346.1| rhizobiocin [Nocardioidaceae bacterium Broad-1]
gi|325948095|gb|EGD40208.1| rhizobiocin [Nocardioidaceae bacterium Broad-1]
Length = 283
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
K TI + + +VG++G DV++G + N+V +GND+ G SG DT
Sbjct: 35 KAATIVGTSSADRLVGTAGVDVIVGGAGNDVILGKAGNDIVCGGSGDDTI 84
>gi|209964156|ref|YP_002297071.1| S-layer protein [Rhodospirillum centenum SW]
gi|209957622|gb|ACI98258.1| S-layer protein [Rhodospirillum centenum SW]
Length = 1090
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 397 ITFDSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS-HEDLIN 454
+ FDS YL + D L+ V +A H+ GVKE RNP+A L YI + + D +
Sbjct: 5 LAFDSTAYLKNNPDVLQAVLNGGFPSARAHFEQFGVKELRNPNAVVNLTYILTENADTVL 64
Query: 455 AFADAPDLVQVG--KDHFS---NFGCEEG-----RFVTFDSYLYLGSYDDLRNVFGSDRG 504
A +Q G KD F N G + G TFDS YL D++ D G
Sbjct: 65 A------AIQSGAAKDVFDWYVNTGVKTGVAPNAELATFDSAKYLADNLDVKAAV--DAG 116
Query: 505 ---AAARHYITHGVKEGR 519
+A HY+ +G E R
Sbjct: 117 VFKSALEHYLAYGRAESR 134
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 479 RFVTFDSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS-HEDL 536
F+ FDS YL + D L+ V +A H+ GVKE RNP+A L YI + + D
Sbjct: 3 NFLAFDSTAYLKNNPDVLQAVLNGGFPSARAHFEQFGVKELRNPNAVVNLTYILTENADT 62
Query: 537 INAFADAPDLVQAG--KDHFS---NFGYEEGRS-----ITFNPDLYLTSYDDL-----WN 581
+ A +Q+G KD F N G + G + TF+ YL D+
Sbjct: 63 VLA------AIQSGAAKDVFDWYVNTGVKTGVAPNAELATFDSAKYLADNLDVKAAVDAG 116
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
VF S A +HY+ +G E R
Sbjct: 117 VFKS----ALEHYLAYGRAESR 134
>gi|148981527|ref|ZP_01816444.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
gi|145960828|gb|EDK26161.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
Length = 520
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+V+GN+ +N F +S N+ FDGS G+D Y I + + N + D +
Sbjct: 443 IVLGNAQDNYFEGNSSNNSFDGSDGIDVLKINGNKGDYLIEKLAGGVTQISGNSNGTDKI 502
Query: 339 SDVERLRFADQCIDSVNV 356
++VE ++F D + N+
Sbjct: 503 TNVEYIKFNDDIVKVDNI 520
>gi|163736686|ref|ZP_02144105.1| bifunctional 2',3'-cyclic nucleotide
2'-phosphodiesterase/3'-nucleotidase periplasmic
precursor protein [Phaeobacter gallaeciensis BS107]
gi|161390556|gb|EDQ14906.1| bifunctional 2',3'-cyclic nucleotide
2'-phosphodiesterase/3'-nucleotidase periplasmic
precursor protein [Phaeobacter gallaeciensis BS107]
Length = 422
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND +IG + N+ F GND+ G G DTF + + +I FE +
Sbjct: 315 DTIRGGAGNDTLIGGNGNDKLFGQQGNDLLIGGDGADTFAFGSNHGRARIRDFEVGV--- 371
Query: 329 DANEHKQDFLSDVERL 344
K D +S E L
Sbjct: 372 ----DKIDIISGAESL 383
>gi|113910586|gb|ABI48028.1| lipase [Acinetobacter sp. MBDD-4]
Length = 617
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T+ SS+ G T+ H + + G GND +IG + N+VF +GND+ + G+DT
Sbjct: 485 TQYESSVKGTSGADTLKAHAGGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGVDT 544
Query: 307 FFY 309
F +
Sbjct: 545 FLF 547
>gi|9963801|gb|AAG09700.1| lipase [Pseudomonas sp. UB48]
Length = 617
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ K+ F+ ++ DD+ GG+K ++ T+ SS+ G T+ H +
Sbjct: 452 SIVTKEPGFLWGLFK---DDVTHSVTAGGLKVGNNV-TQYESSVKGSSGADTLKAHAGGD 507
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND +IG + N+VF +GND+ + G DTF L+ ++ ++ +
Sbjct: 508 WLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTF-------LFNGAFGQDRVVGFT 560
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
AN+ K FL L D + V Q ++L++ L+ V
Sbjct: 561 AND-KLVFLGVQGVLPNDDFRAHASMVGQDTVLKFGGDSVTLVGV 604
>gi|197103952|ref|YP_002129329.1| hypothetical protein PHZ_c0486 [Phenylobacterium zucineum HLK1]
gi|196477372|gb|ACG76900.1| hypothetical protein PHZ_c0486 [Phenylobacterium zucineum HLK1]
Length = 424
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 82/217 (37%), Gaps = 61/217 (28%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF------------------ 440
FD YL ++ D+ G R A HY+T G EGR+P
Sbjct: 168 FDQAWYLAAHPDV----GGGRAAPLVHYLTSGSAEGRSPHPLFDEAWYRRENAHELAATG 223
Query: 441 -KALEYI---------ASHE--DLINAFADAPDLV--QVGKDHFSNFGCEEG--RFVTFD 484
ALE+ + H D+ + A P L + +H+ GC +G FD
Sbjct: 224 MTALEHYVRRGAALGRSPHPAFDVAHYLAQGPALAPDEGPAEHYLREGCAQGLSPHPLFD 283
Query: 485 SYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 542
Y + S +G HY+T G + G P F Y+A +
Sbjct: 284 PAWY------MHRAGSSAQGVPPLVHYLTEGWRSGVPPHPLFDPKWYLAQN--------- 328
Query: 543 APDLVQAGKD---HFSNFGYEEGRSIT--FNPDLYLT 574
PD+ +AG + HF + G EGRS + F+P YL
Sbjct: 329 -PDVAEAGLEPLAHFLSGGAAEGRSHSPWFDPAHYLA 364
>gi|209542168|ref|YP_002278349.1| hypothetical protein Gdia_3562 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209533348|gb|ACI53284.1| hypothetical protein Gdia_3562 [Gluconacetobacter diazotrophicus
PAl 5]
Length = 352
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 248 ESWSSIGGYE-KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E WSS G++ N+ + H G++GND G++ NN FE GN +F+ S+G D
Sbjct: 133 EQWSSTAGWQTSNVNVIIH-------GTAGNDYFTGSNQNNYLFEGIGNSIFNQSAGNDI 185
Query: 307 FFYYAPSYLYKIYRFENAIIVYDA---NEHKQDFLSDVERLRFAD----QCIDSVNVKQR 359
A Y ++A+ Y+ +E+ ++++ + D + I NV
Sbjct: 186 ISTNASDGTSNTYYAKDALTSYEGGYVDENNNSYMNNGDDWLLQDTANGKIISLTNVGSV 245
Query: 360 SI--LEYTASYED 370
I + Y+AS E+
Sbjct: 246 VIGGVTYSASVEN 258
>gi|85714736|ref|ZP_01045723.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85714762|ref|ZP_01045749.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85698621|gb|EAQ36491.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85698647|gb|EAQ36517.1| possible protease [Nitrobacter sp. Nb-311A]
Length = 160
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 43/159 (27%)
Query: 184 MVSDIVAVQKIYGAP-KGSLGNNIYK------------IEVQQKDSPFIQTIYDSGGDDL 230
M+ DI A+Q +YGA + G +Y + + + + TI+D GG D
Sbjct: 1 MMFDIAALQHLYGANFNTNSGATVYSWSATGEMFVNGVAQGRPTGNRILLTIWDGGGSDT 60
Query: 231 LDLTLIGGVKNY-----IDLNTESWSSI-----------GGYEKNMTIAQ--------HT 266
D + NY +DL SW++ G IA +
Sbjct: 61 YDFS------NYATNLSVDLRPGSWTTTSSAQLARLHYDGSQLATGNIANALLFDADPRS 114
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+IE+ VG +GND ++GN A N + GND G G D
Sbjct: 115 LIENAVGGAGNDQILGNLAANSLRGAGGNDCLYGLEGND 153
>gi|329849044|ref|ZP_08264072.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844107|gb|EGF93676.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1276
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G N + L+ W ++ G N T+ V+++++G GND++ G + +++ +GND+
Sbjct: 521 GDGNDLLLSVGGWGTMLGEAGNDTLTGSDVVDTMIGGQGNDLLSGGAGDDILNGDAGNDI 580
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G +G D Y + + + A + L DV ++ A S +
Sbjct: 581 TNGGAGNDLIHAYEGVDTVDGGDGLDTVNMG-APDGANGVLVDVTQISTAAGVTFSNGMV 639
Query: 358 QRSI----LEYTASYEDLIQVIGQDVFES 382
R++ L + + LI +G D F +
Sbjct: 640 LRNVEVLLLSASGGNDTLIGGVGNDTFNA 668
>gi|281343872|gb|EFB19456.1| hypothetical protein PANDA_014527 [Ailuropoda melanoleuca]
Length = 446
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFI 82
R++ LT L F + ++ AL WS+V LTF E H+DI ++
Sbjct: 65 RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHEGHADIMIDFTRYW 124
Query: 83 SSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N G + + + E ++FD + W G +GT L A HE GH LGL
Sbjct: 125 HGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNQGTDLLQVAAHEFGHVLGL 184
Query: 135 MH 136
H
Sbjct: 185 QH 186
>gi|150376202|ref|YP_001312798.1| hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
gi|150030749|gb|ABR62865.1| Hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
Length = 1072
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 262 IAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+A+ T+ +E+V G SG+D + G++ NN+F GNDV DG G DT Y + +
Sbjct: 75 VAEDTLANVENVYGGSGDDFITGDALNNLFRGGGGNDVLDGGGGNDTADYTDKTASVVVT 134
Query: 320 RFENAIIVYDANEHKQDFLSDVERL 344
+ N +D +S+ E +
Sbjct: 135 LAGATPVTVFVNGIAEDMISNFENV 159
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT--FFYYAPSYLYKIYRFENAI 325
IE+++G +GND + G++A N+F G DV DG++G DT F S + + A
Sbjct: 402 IENIIGGAGNDQLTGDAAANMFRGGLGADVLDGAAGSDTADFSDKTSSLVVTLAGASPAT 461
Query: 326 IVYDANEHKQDFLSDVERL 344
++ +D L ++E +
Sbjct: 462 VLVGG--IAEDTLRNIENI 478
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT--FFY 309
++GG ++ +IA+ IE++VG SG+D + G++A N F G D DG SG DT F
Sbjct: 317 TVGGLAED-SIAK---IENIVGGSGDDTLSGDAAANTFRGGLGADALDGGSGSDTADFSD 372
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A S + + +A+ +D + ++E +
Sbjct: 373 KAQSVVLALNGAIDAVATVGG--TAEDSVRNIENI 405
>gi|301779359|ref|XP_002925110.1| PREDICTED: stromelysin-3-like [Ailuropoda melanoleuca]
Length = 467
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFI 82
R++ LT L F + ++ AL WS+V LTF E H+DI ++
Sbjct: 77 RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHEGHADIMIDFTRYW 136
Query: 83 SSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N G + + + E ++FD + W G +GT L A HE GH LGL
Sbjct: 137 HGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNQGTDLLQVAAHEFGHVLGL 196
Query: 135 MH 136
H
Sbjct: 197 QH 198
>gi|325983141|ref|YP_004295543.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
gi|325532660|gb|ADZ27381.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
Length = 1176
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 24/139 (17%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDD----LLDLTLIGGVKNY-IDLNTESWSS 252
G+ GN+ +++ + S +YD G G D L D TLI ++ +D N E+ ++
Sbjct: 190 NGAAGNDTFQVSGSGEGSD----VYDGGDGSDTIKALSDGTLIQLAGDFGVDNNIETITA 245
Query: 253 IGGYEKNMTIA----------QHTVIESVV--GSSGNDVVIGNSANNVFFESSGNDVFDG 300
G + N+T+ T ++ VV G SGNDV+IGN+ +N +GND +G
Sbjct: 246 DG--KANVTVLGDSGNNTLDFTSTTLDGVVVNGGSGNDVIIGNAFDNTIRGGAGNDTLNG 303
Query: 301 SSGLDTFFYYAPSYLYKIY 319
++G DTF +Y
Sbjct: 304 AAGNDTFQVSGSGEGSDVY 322
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
T IE + G SGND + GN NN +G+D +G++G DTF
Sbjct: 839 TSIEEINGGSGNDTITGNGGNNTIHGGAGDDALNGAAGDDTF 880
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 20/138 (14%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDD----LLDLTLIGGVKNY-IDLNTESWSS 252
G+ GN+ +++ + S +YD G G D L D TLI ++ +D N E+ ++
Sbjct: 302 NGAAGNDTFQVSGSGEGSD----VYDGGDGSDTIKALSDGTLIQLAGDFGVDNNIETITA 357
Query: 253 IG-------GYEKNMTIA-QHTVIESVV--GSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
G G N T+ T ++ VV G SGNDV+ GN+ +N +GND +G++
Sbjct: 358 DGKANVTVFGDSGNNTLDFTSTTLDGVVVNGGSGNDVITGNAFDNTIRGGAGNDTLNGAA 417
Query: 303 GLDTFFYYAPSYLYKIYR 320
G DTF +Y
Sbjct: 418 GNDTFQVSGSGEGSDVYN 435
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 264 QHTVIESVV--GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T ++ VV G SGNDV+ GN+ +N +GND +G++G DTF +Y
Sbjct: 601 TSTTLDGVVVNGGSGNDVITGNAFDNTIRGGAGNDTLNGAAGNDTFQVSGSGEGSDVYN 659
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
T IE + G SGND + GN NN +G+D +G++G DTF
Sbjct: 952 TSIEEINGGSGNDTITGNGGNNTIHGGAGDDELNGAAGDDTF 993
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 264 QHTVIESVV--GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T ++ VV G SGND++ GN+ +N +GND +G++G DTF +Y
Sbjct: 489 TSTTLDGVVVNGGSGNDIITGNAFDNTIRGGAGNDTLNGAAGNDTFQVSGSGEGSDVYN 547
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 264 QHTVIESVV--GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T ++ VV G SGND++ GN+ +N +GND +G++G DTF +Y
Sbjct: 153 TSTTLDGVVVNGGSGNDIITGNAFDNTIRGGAGNDTLNGAAGNDTFQVSGSGEGSDVY 210
>gi|304392834|ref|ZP_07374766.1| Ig family protein [Ahrensia sp. R2A130]
gi|303295002|gb|EFL89370.1| Ig family protein [Ahrensia sp. R2A130]
Length = 4355
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND + S ++ +GND DG +G+D + Y I I+V N +
Sbjct: 3342 TGNDFIFAGSGDDTIAAGAGNDEIDGGTGVDVVIFSGERSEYTIELDGEDILVSGPNGN- 3400
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSI 361
D +S+VE RF+D +V++ +
Sbjct: 3401 -DVISNVETFRFSDGMTGTVDLSTADL 3426
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-- 330
G SG+D++ G + ++VF SGND DG G D Y + + + A + ++
Sbjct: 921 GGSGSDIISGRAGDDVFVGGSGNDTIDGGIGNDEVVYETGTAVDGMAVQTGATLTVNSAF 980
Query: 331 ----NEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D +S E +RF D+ V I+
Sbjct: 981 GTAGGTEGTDTISQAETIRFQATGDDAFEVDASDIV 1016
>gi|194292185|ref|YP_002008092.1| metalloprotease, hemolysin-type calcium-binding region [Cupriavidus
taiwanensis LMG 19424]
gi|193226089|emb|CAQ72036.1| metalloprotease, Hemolysin-type calcium-binding region [Cupriavidus
taiwanensis LMG 19424]
Length = 1648
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG---------SSGN 277
G DLLD + G N+ + + S +++ N+ + +E V+G S+GN
Sbjct: 1452 GIDLLDFSDATGAINFTLVQSGSATTVNLGSVNLGTDNYRGMEGVIGSAFNDTLAGSAGN 1511
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
DV+ G + ++V +GND+ G +G DT + S ++I R + A +
Sbjct: 1512 DVLRGGAGDDVMSGGAGNDLLVGGAGADTLAGGSGSDTFRILRADAASV 1560
>gi|326669661|ref|XP_002662954.2| PREDICTED: matrix metalloproteinase-15-like [Danio rerio]
Length = 655
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 83/224 (37%), Gaps = 59/224 (26%)
Query: 28 IRYKPDVLTTHR-----LSFDITELNP-----NAQEVARWALGEWSKVVDLTFEETSIH- 76
+R K LT H+ ++F I P N+ E R A W KV LTF+E H
Sbjct: 111 VRRKRYALTGHKWDKTHITFSIQNYTPKIGEYNSYEAIRRAFRVWEKVTPLTFDEIPFHE 170
Query: 77 --------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADVWRYGIG 115
DI ++ + + +D YF + +FD + W G
Sbjct: 171 VKYGRRKEPDIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGMGGDTHFDSDEPWTIGSQ 230
Query: 116 --KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+G L A+HE+GHALGL H + + D EN + +P+D
Sbjct: 231 NLQGNDLFLVAVHELGHALGLEHSNNPLAIMAPFYQWMDTEN---------FELPED--- 278
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
D+ VQ+IYG P S + + ++ P
Sbjct: 279 -------------DLRGVQQIYGPPSSSPTQALPTVTPRRPAHP 309
>gi|115496089|ref|NP_001069451.1| matrix metalloproteinase-19 [Bos taurus]
gi|115305300|gb|AAI23723.1| Matrix metallopeptidase 19 [Bos taurus]
gi|296487677|gb|DAA29790.1| matrix metalloproteinase 19 [Bos taurus]
Length = 499
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 47/115 (40%), Gaps = 14/115 (12%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---------SIHSDIKFISSN 85
LT L+ T + A+ A WS V LTF E S H SN
Sbjct: 110 LTFRILNLPSTLPSSTARAALLQAFQYWSNVAPLTFREVKAGWADIRLSFHGRHSLYCSN 169
Query: 86 N----GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ G V D ++FD+ ++W G +G L A HEIGHALGL H
Sbjct: 170 SFDGPGRVLA-HADIPELGSVHFDEDELWTEGTYRGVNLRIIAAHEIGHALGLGH 223
>gi|240948247|ref|ZP_04752633.1| hypothetical protein AM305_05324 [Actinobacillus minor NM305]
gi|240297286|gb|EER47827.1| hypothetical protein AM305_05324 [Actinobacillus minor NM305]
Length = 1965
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAP 312
I H + + G GNDV+ G S +++ + G+D DG G DT +
Sbjct: 498 IRGHRGNDRLFGDDGNDVIFGGSDDDMLYGGEGDDTLVGEGGDDYLDGGEGKDTAEFSGD 557
Query: 313 SYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFAD 348
YKI + + +++ D + + DFL ++E L F D
Sbjct: 558 FADYKITKMGDGLLISDTRQGRDGTDFLRNIEMLNFKD 595
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYID-----LNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I TI + D ++++ L G N N++ ++ G + N + + ++G
Sbjct: 1226 IDTINAAAMDGVIEVNLSTGKANLAGKVLTITNSQQIENVTGGDYNDKLTGNKAANVLIG 1285
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
GNDV++G N+V GN+ GS G DTF
Sbjct: 1286 GRGNDVLVGLEGNDVLVGGLGNNTLTGSQGNDTFI 1320
>gi|328724693|ref|XP_003248223.1| PREDICTED: matrix metalloproteinase-16-like isoform 2
[Acyrthosiphon pisum]
Length = 557
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 56 RWALGEWSKVVDLTF---EETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEIN 103
R A WS V LTF + +H +I+F +G + Y + +
Sbjct: 144 RKAFDVWSDVTPLTFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFPVYGGDAH 203
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
FD ++ W G KGT L A HE GH+LGL H
Sbjct: 204 FDDSEKWSIGSFKGTNLFQVAAHEFGHSLGLSH 236
>gi|330890711|gb|EGH23372.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 1688
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND++ GN+ +++ + + GND+ DG +G DT S IYRF A
Sbjct: 333 GEEGNDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGS---DIYRF--------AKG 381
Query: 333 HKQDFLSDVERLRFADQCIDSVNVK--QRSILEYTASYEDLIQVIGQ--DVFESMKHFYE 388
+ QD +++ A +D++ + + L + S +DL+ I D HF +
Sbjct: 382 YGQDSINNNSYGETATDKVDAIQLDGLNSADLRFYRSSDDLVIQIKATGDTLTVRSHFSQ 441
Query: 389 FGLS 392
G++
Sbjct: 442 DGVT 445
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIVY 328
+ G GND ++G++ N+ + SGND DG +G D S +Y+ R +++I Y
Sbjct: 130 LTGGEGNDTLLGDAGNDTLYGDSGNDQLDGGTGNDYLTAGDGSDVYRFSRGWGQDSINNY 189
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D++ K D + + AD + T SY DLI
Sbjct: 190 DSSAGKTDAVEFAADILPADVIV-------------TRSYTDLI 220
>gi|254425996|ref|ZP_05039713.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196188419|gb|EDX83384.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 2317
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDAN 331
G G+D+++G+S ++V G++ DG G D S + I R + +++V D
Sbjct: 1729 GGKGDDLLLGSSGDDVLLPGFGDNAVDGGEGTDVGVSNGVSNDFSIRRRLDGSVVVVDVR 1788
Query: 332 EHKQDFL-SDVERLRFADQCI 351
K L +VER +F DQ +
Sbjct: 1789 SQKSLTLYQNVERFKFDDQML 1809
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ T++ G+D+L+ GG N + ++ G N T+ + +S++G+ GND
Sbjct: 2050 VDTLFGGDGNDILN----GGADNDTLDGGKGNDTLDGGRGNDTLTGGSGRDSLLGNDGND 2105
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G + N+ F GND G G+DT
Sbjct: 2106 ILDGEANNDALFGGKGNDTLSGGRGVDTL 2134
>gi|328724691|ref|XP_001949484.2| PREDICTED: matrix metalloproteinase-16-like isoform 1
[Acyrthosiphon pisum]
Length = 547
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 56 RWALGEWSKVVDLTF---EETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEIN 103
R A WS V LTF + +H +I+F +G + Y + +
Sbjct: 144 RKAFDVWSDVTPLTFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFPVYGGDAH 203
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
FD ++ W G KGT L A HE GH+LGL H
Sbjct: 204 FDDSEKWSIGSFKGTNLFQVAAHEFGHSLGLSH 236
>gi|218248619|ref|YP_002373990.1| RTX cytolytic toxin protein A [Cyanothece sp. PCC 8801]
gi|218169097|gb|ACK67834.1| RTX cytolytic toxin protein A [Cyanothece sp. PCC 8801]
Length = 1394
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G+SGND +IGN+ ++V +GND+ G SG DTF Y
Sbjct: 1286 LTGNSGNDTLIGNAGDDVLTGGTGNDLLSGGSGGDTFNY 1324
>gi|149716438|ref|XP_001500102.1| PREDICTED: similar to matrix metalloproteinase [Equus caballus]
Length = 483
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 77/214 (35%), Gaps = 46/214 (21%)
Query: 29 RYKPDVLTTHRLSFDITELNP-NAQEVARWALGEWSKVVDLTFE-------------ETS 74
++K + LT +R+S T + P + + AL WS V L F ET
Sbjct: 116 KWKKNTLT-YRISKYTTSMTPADVNKAVEMALQAWSSAVPLNFVRVDSGEADIMISFETG 174
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
H D G + + +FD A+ W G G L A HE GHALG
Sbjct: 175 DHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAHEFGHALG 233
Query: 134 LMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L H + YP Y N Y + +P+D D+ +Q
Sbjct: 234 LAHSTDPSALMYPTYKYQNPY----------GFHLPKD----------------DVKGIQ 267
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+YG + LG + +P I + DSG
Sbjct: 268 ALYGPRRAFLGKPT--MPHAPPRNPSIPDLCDSG 299
>gi|291567838|dbj|BAI90110.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 805
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 30/112 (26%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYE 257
+G+ GN++ + +P TIY GDD TLIGG N Y+D G
Sbjct: 592 RGTRGNDLLR------GTPGNDTIYGLAGDD----TLIGGKGNDYLD----------GGP 631
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
N +S+VG +G D +IG N++ +G D+ G G D F +
Sbjct: 632 GN---------DSLVGGAGRDTLIGGKGNDILNGGAGQDILTGGPGADIFVF 674
>gi|33862361|ref|NP_893921.1| protease [Prochlorococcus marinus str. MIT 9313]
gi|33640474|emb|CAE20263.1| possible protease [Prochlorococcus marinus str. MIT 9313]
Length = 356
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE+GHALGL HP + G VY + + + +VMSY +P+ + F +
Sbjct: 142 HELGHALGLEHPHDNSDG-DVYLSTDPQLSATPEETVMSYRVPESGVYPTDFS------I 194
Query: 186 SDIVAVQKIYGAPKG-SLGNNIYKIEVQ 212
+D A+++I+G+P+ S N +Y++ Q
Sbjct: 195 NDYNALEQIWGSPQAQSTQNVVYRLYQQ 222
>gi|148241991|ref|YP_001227148.1| hypothetical protein SynRCC307_0892 [Synechococcus sp. RCC307]
gi|147850301|emb|CAK27795.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 789
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 213 QKDSPFIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
Q S Q I +G D L D + G N I+LN W +N + +
Sbjct: 593 QGASGNDQLIGGAGNDTLNGGSGRDTAVFHGQSNRINLNISGW-------QNTREGRDRL 645
Query: 268 --IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
IESV GNDVV GN NN SGND G++G D
Sbjct: 646 VSIESVNAGGGNDVVTGNRGNNTLSGQSGNDSLRGAAGSD 685
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G +G+D +IG S N+ SGND G SG DTF + +I F N
Sbjct: 687 LLGGNGSDRLIGGSGNDRLVGGSGNDRLVGGSGRDTFVLSEGAGYDRISDFRNG------ 740
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
QD R++ +D++ V+ R+ Y DL+ V+
Sbjct: 741 ----QD------RIQVG-AGVDNLRVQNRNGHAYVYEGRDLMAVV 774
>gi|30248187|ref|NP_840257.1| hemolysin-type calcium-binding domain-containing protein
[Nitrosomonas europaea ATCC 19718]
gi|30180072|emb|CAD84072.1| Hemolysin-type calcium-binding region:RTX N-terminal domain
[Nitrosomonas europaea ATCC 19718]
Length = 3064
Score = 41.2 bits (95), Expect = 0.60, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
GS+ ND +IGN+ N++ SGND+ G +G D F +
Sbjct: 2926 GSTANDTLIGNAGNDILIGGSGNDMLTGGTGGDVFLW 2962
>gi|116694643|ref|YP_728854.1| RTX toxin exported protein [Ralstonia eutropha H16]
gi|113529142|emb|CAJ95489.1| RTX toxin exported protein [Ralstonia eutropha H16]
Length = 1552
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ GS+GNDV+ G + N+V +GNDV G +G DT S ++ R + A +
Sbjct: 1407 DNLTGSAGNDVLRGGAGNDVLVGGAGNDVLTGGAGADTLTGGNGSDTFRFLRADPASV 1464
>gi|291614761|ref|YP_003524918.1| Hemolysin-type calcium-binding region [Sideroxydans lithotrophicus
ES-1]
gi|291584873|gb|ADE12531.1| Hemolysin-type calcium-binding region [Sideroxydans lithotrophicus
ES-1]
Length = 1350
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG ++ +A +++ G +GND +I S N+ GND SG DTF Y +PS
Sbjct: 456 GGAMNDLLVAGQNGNDTLNGGTGNDTLIAGSGNDFLVGGEGNDTIYAGSGFDTFNYVSPS 515
Query: 314 Y 314
+
Sbjct: 516 F 516
>gi|119383312|ref|YP_914368.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119373079|gb|ABL68672.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 1079
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+S S +GG ++ + + ++G +GNDV+ G++ N++ +GND +G +G+DT
Sbjct: 732 DSLSGLGGNDR---LFGGAGADQLLGGAGNDVLNGDAGNDLLNGGAGNDTLNGGAGIDTA 788
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEY 364
Y S + + +D L ++E + FAD+ + ++L
Sbjct: 789 AYGGASSGVTV-NLGLTVAQLIGGGQGRDVLRNIENVNGSGFADRLTGNT---GNNVLNG 844
Query: 365 TASYEDLIQVIGQD 378
A + L G+D
Sbjct: 845 AAGNDTLSGGAGRD 858
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ N T + ++V G +GNDV+ G + N+ SGND +G SG D F+ ++
Sbjct: 161 FDGNDTFTGYAGNDNVDGGAGNDVLNGGAGNDTLIGGSGNDTLNGGSGNDYFYIGGTNFG 220
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ +Y D + V ++ ++ + S NV L +
Sbjct: 221 HDVYN----------GGEGSDEIRLVGKVTVSNLSLTSANVISTETLNF 259
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ N T + ++V G +GNDV+ G + N+ SGND +G SG D F+ +
Sbjct: 290 FDGNDTFTGYAGNDNVDGGAGNDVLNGGAGNDTLIGGSGNDTLNGGSGNDYFYIGGTDFG 349
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ +Y D + V ++ ++ + S NV L +
Sbjct: 350 HDVYN----------GGEGSDEIRLVGKVTVSNLSLTSANVIGTETLNF 388
>gi|188580624|ref|YP_001924069.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
gi|179344122|gb|ACB79534.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
Length = 1301
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 23/100 (23%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA---FKALE---------- 528
+FD Y Y DL + G DR +HY HG +EGR P+A ALE
Sbjct: 40 SFDPVFYRRYYPDL-AILGDDRKLLRQHYAKHGRREGRAPNAASLIAALEGESGPLPADF 98
Query: 529 ----YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
Y A H+DL A + +L +H+ FG EGR+
Sbjct: 99 IPSHYRALHDDL-TALTEPWEL----GEHYLRFGRFEGRT 133
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 23/99 (23%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA---FKALE---------- 444
+FD Y Y DL + G DR +HY HG +EGR P+A ALE
Sbjct: 40 SFDPVFYRRYYPDL-AILGDDRKLLRQHYAKHGRREGRAPNAASLIAALEGESGPLPADF 98
Query: 445 ----YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
Y A H+DL A + +L +H+ FG EGR
Sbjct: 99 IPSHYRALHDDL-TALTEPWEL----GEHYLRFGRFEGR 132
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+F+P Y Y DL + G DR QHY HG +EGRA
Sbjct: 40 SFDPVFYRRYYPDL-AILGDDRKLLRQHYAKHGRREGRA 77
>gi|302564017|ref|NP_001181006.1| matrix metalloproteinase-25 [Macaca mulatta]
Length = 483
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 77/206 (37%), Gaps = 48/206 (23%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKFISSNNG 87
++K ++LT + + + ++ + AL WS V L+F S +DI IS NG
Sbjct: 116 KWKKNILTYRVSKYTTSMSSAEVEKAVQMALQAWSSAVPLSFVRINSGEADI-MISFENG 174
Query: 88 ------YVCTPRYDSRYFM--------EINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
PR + + +FD A+ W G G L A HE GHALG
Sbjct: 175 DHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAHEFGHALG 233
Query: 134 LMH---PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L H P + YP Y N Y + +P+D D+
Sbjct: 234 LAHSTDPSALM--YPTYKYQNPY----------GFHLPKD----------------DVKG 265
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDS 216
+Q +YG K LG + K S
Sbjct: 266 IQALYGPRKPFLGKPMVPHAPHHKPS 291
>gi|78776444|ref|YP_392759.1| hemolysin-type calcium-binding region [Sulfurimonas denitrificans
DSM 1251]
gi|78496984|gb|ABB43524.1| Hemolysin-type calcium-binding region [Sulfurimonas denitrificans
DSM 1251]
Length = 768
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 271 VVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-IVY 328
VGS+G +D + G + N+ F GND+ G SG D Y Y I R E +
Sbjct: 561 TVGSAGGDDRIFGEAGNDTIFGGEGNDMLHGGSGTDVATYSGNIAEYIITRDEGKTYVAL 620
Query: 329 DANEHKQDFLSDVERLRFAD 348
+N ++ D + + E ++FAD
Sbjct: 621 ASNPNEIDTIINTETIKFAD 640
>gi|291520117|emb|CBK75338.1| hypothetical protein CIY_27760 [Butyrivibrio fibrisolvens 16/4]
Length = 178
Score = 41.2 bits (95), Expect = 0.65, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRG 420
EY A Y D+ Q +G D HF FG+ E R ++F+ +Y DL+ ++G D
Sbjct: 56 EYAAYYPDVEQALGTDEKILFSHFVNFGIWEQRQPSVSFNVDVYASRNADLQKLYGDDIV 115
Query: 421 AAARHYITHGVKEGRNP 437
A HY + E P
Sbjct: 116 AYYVHYANNKKTEAWRP 132
Score = 40.4 bits (93), Expect = 0.96, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F A EY A + D+ A ++ + HF NFG E R S++FN D+Y + DL
Sbjct: 52 FNAKEYAAYYPDVEQALGTDEKILFS---HFVNFGIWEQRQPSVSFNVDVYASRNADLQK 108
Query: 582 VFGSDRSAAAQHYITHGMKEG 602
++G D A HY + E
Sbjct: 109 LYGDDIVAYYVHYANNKKTEA 129
>gi|4104348|gb|AAD02003.1| S-layer-RTX protein [Campylobacter rectus]
Length = 1238
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TIY + GDD T+ GG N + I GY+ N TI + +S+ G G+D
Sbjct: 993 NTIYGNEGDD----TIYGGEGNDKIYGGQGNDKIYGYKGNNTIMGESGKDSIYGGDGDDT 1048
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ GN N++ F + GND G+ D F A + + +AI + N+
Sbjct: 1049 IYGNDGNDIIFGNDGNDTIYGNEDNDLVFGGAGNDTIDGGKGNDAIYGNNGNDK 1102
>gi|83953143|ref|ZP_00961865.1| hypothetical protein NAS141_12581 [Sulfitobacter sp. NAS-14.1]
gi|83842111|gb|EAP81279.1| hypothetical protein NAS141_12581 [Sulfitobacter sp. NAS-14.1]
Length = 829
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L GG+ N ++ G N T++ + ++G G+D++ GN+ ++ +G
Sbjct: 690 LAGGINN---------DTVNGGSGNDTLSGDNGADQLIGGDGDDLIKGNAGHDTLDGGAG 740
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
NDV G G D F Y A I F+N I
Sbjct: 741 NDVLSGGIGADRFIYGAGQ--DTILSFQNEI 769
>gi|158337389|ref|YP_001518564.1| type I secretion target repeat-containing protein [Acaryochloris
marina MBIC11017]
gi|158307630|gb|ABW29247.1| type I secretion target repeat protein [Acaryochloris marina
MBIC11017]
Length = 580
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
Query: 41 SFDITELNPN-AQEVARWALGEWSKVVDLTFEETS---------IHSDIKFISSNNGYVC 90
SF + L+ N A+ + R ALG W+K L F+E I +FI +G +
Sbjct: 152 SFQLNGLSNNEARSLFREALGVWAKYAPLNFQEVQDPGNGSDVDIRVGAEFIDGRSGTLA 211
Query: 91 ---TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
PR + +D + W G + A+HE GH+LGL H
Sbjct: 212 FAFFPRGGDQ-----TYDTGETWNAG-----LFLETAVHETGHSLGLGH 250
>gi|218512255|ref|ZP_03509095.1| putative rhizobiocin [Rhizobium etli 8C-3]
Length = 221
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYRF 321
+E+V SGND ++GN A+N + ++GND G SG DT A + +Y
Sbjct: 1 MENVKAGSGNDTIVGNEADNTLWGNAGNDTLTGDSGNDTLDGGAGNDKLSGGVGNDVYIV 60
Query: 322 ENA--IIVYDANE 332
+NA ++ +ANE
Sbjct: 61 DNANDTVIENANE 73
>gi|149911640|ref|ZP_01900251.1| hypothetical protein PE36_02984 [Moritella sp. PE36]
gi|149805310|gb|EDM65324.1| hypothetical protein PE36_02984 [Moritella sp. PE36]
Length = 2370
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 237 GGVKN--YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI---------GNSA 285
GGV + +D + S+I G +K+ + ++ + G GNDV++ G S
Sbjct: 2177 GGVSDSATVDFEYVAGSTITGSDKSEILLGSDDVDVLEGQGGNDVLVAGANNDSLLGGSG 2236
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
N++ +GND+ G SG+DTF + I + I ++ NE K D LSD+
Sbjct: 2237 NDMLIGGTGNDILSGGSGIDTFVWLDGDEGTAIIPAVDHITDFNINEDKLD-LSDL 2291
>gi|307194255|gb|EFN76651.1| Matrix metalloproteinase-14 [Harpegnathos saltator]
Length = 547
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 37 THRLSFDITE----LNPNA--QEVARWALGEWSKVVDLTFEE-----TSIHSDIKFISSN 85
T L++ IT+ LN +A +E+ R A WS+ DLTF + ++H +I+F
Sbjct: 86 TKNLTYQITKYPSGLNNDAVDKEI-RTAFNVWSEYTDLTFTQKKGLHNNVHIEIRFEVGE 144
Query: 86 NG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+G Y Y + +FD ++ W +GT L A HE GH+LGL H
Sbjct: 145 HGDGDPFDGPGGTLAHAYFPVYGGDAHFDDSERWTIRSYRGTNLFQVAAHEFGHSLGLSH 204
>gi|110617805|gb|ABG78617.1| lipase class 3 [Pseudomonas fluorescens]
Length = 617
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 239 VKNYIDLNTESWSSIGGYEKNM-------TIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ N D+ + S++ YE ++ T+ H + + G GND ++G++ N+VF
Sbjct: 470 LHNVTDMGLKVGSNLTAYESSVRGTAGADTLKAHAGGDRLFGLEGNDHLLGSAGNDVFVG 529
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+GND+ + G DTF L+ ++ ++ Y A++ K FL L D
Sbjct: 530 GAGNDLMESGGGADTF-------LFNGAFGQDRVVGYTADD-KLVFLGVQGVLPGDDLRA 581
Query: 352 DSVNVKQRSILEYTASYEDLIQV 374
+ V Q ++L + L+ V
Sbjct: 582 HASAVGQDTVLTFGGDSVTLVGV 604
>gi|10732833|gb|AAG22559.1| lipase [Pseudomonas fluorescens]
Length = 617
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T+ SS+ G T+ H + + G GND +IG + N+VF +GND+ + G DT
Sbjct: 485 TQYESSVTGTSGADTLKAHAGGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADT 544
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F L+ ++ ++ + AN+ K FL L D + V Q ++L++
Sbjct: 545 F-------LFNGAFGQDRVLGFTAND-KLVFLGVQGVLPNDDFRAHASTVGQDTVLKFGG 596
Query: 367 SYEDLIQV 374
L+ V
Sbjct: 597 DSVTLVGV 604
>gi|134093314|ref|YP_001098389.1| putative Jacalin-related lectin family protein [Herminiimonas
arsenicoxydans]
gi|133737217|emb|CAL60260.1| conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 949
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 8/148 (5%)
Query: 425 HYITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
H+ +G EGR +P+ F A Y + D+ A +Q H+ + G E GR +
Sbjct: 703 HWKDNGFNEGRQGSPE-FSASYYWNRYTDVQAACPTPSTKLQCALQHWLDDGFELGRQGS 761
Query: 483 FDSYL--YLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRN--PDAFKALEYIASHEDLI 537
D + YL Y DL+N FG D A H++ G EGRN PD A
Sbjct: 762 ADVSIVSYLNRYPDLQNAFGVDNYDDAFDHWMNSGEDEGRNARPDTSFAGPVNGPKRVGG 821
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSI 565
D Q K H F G+ +
Sbjct: 822 GGGGGWSDAAQCQKQHVVAFNVSSGKRL 849
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 509 HYITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
H+ +G EGR +P+ F A Y + D+ A +Q H+ + G+E GR +
Sbjct: 703 HWKDNGFNEGRQGSPE-FSASYYWNRYTDVQAACPTPSTKLQCALQHWLDDGFELGRQGS 761
Query: 567 FNPDL--YLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGR 603
+ + YL Y DL N FG D A H++ G EGR
Sbjct: 762 ADVSIVSYLNRYPDLQNAFGVDNYDDAFDHWMNSGEDEGR 801
>gi|242000886|ref|XP_002435086.1| matrix metalloproteinase, putative [Ixodes scapularis]
gi|215498416|gb|EEC07910.1| matrix metalloproteinase, putative [Ixodes scapularis]
Length = 550
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 52 QEVARWALGEWSKVVDLTF---EETSIHSDIKFISSNNG---------YVCTPRYDSRYF 99
+E+AR A W+ V LTF + ++ DI+F+ +G + RY
Sbjct: 109 KEIAR-AFKMWADVSPLTFTHKKTGPVNIDIQFVRGEHGDGDPFNGPGGTLAHAFFPRYG 167
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ +FD + W G G L A HE GH+LGL H
Sbjct: 168 GDAHFDDEEKWTIGEHGGVNLFQVAAHEFGHSLGLSH 204
>gi|38343928|emb|CAE54592.1| putative hatching enzyme [Sphaerechinus granularis]
Length = 419
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 46 ELNPNA-QEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSR--- 97
+LN +A + R A W +V LTF E S+ IKF S ++G + +D R
Sbjct: 66 DLNRDAIKNEMRRAFQVWDEVSGLTFREEADSPSVDIRIKFGSFDHGDGIS--FDGRGGV 123
Query: 98 ---YFMEIN----FDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
F+ N FD ++ W G GT L A HE GH+LGL H
Sbjct: 124 LAHAFLPRNGDAHFDDSETWTIGTYSGTNLFQVAAHEFGHSLGLYH 169
>gi|260429652|ref|ZP_05783628.1| hemolysin-type calcium-binding region [Citreicella sp. SE45]
gi|260419135|gb|EEX12389.1| hemolysin-type calcium-binding region [Citreicella sp. SE45]
Length = 1181
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 263 AQHTVIESVVGSSGNDV---------VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
A + ++S+ G +GNDV ++G S N++ + GND G SG DTF + S
Sbjct: 1051 ASTSTLDSIEGGAGNDVLAGANGDDTILGGSGNDIIRANGGNDTVAGGSGADTFIFGLSS 1110
Query: 314 YLYKIYRFENAI 325
+ I F++ I
Sbjct: 1111 EVDTILDFQDDI 1122
>gi|260784612|ref|XP_002587359.1| hypothetical protein BRAFLDRAFT_231413 [Branchiostoma floridae]
gi|229272504|gb|EEN43370.1| hypothetical protein BRAFLDRAFT_231413 [Branchiostoma floridae]
Length = 181
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 22/112 (19%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKF----------------ISSNNG-----YVCTPRYDS 96
A W V L F T H DI SS G + P +S
Sbjct: 42 AFSVWESVSSLRFIRTFGHPDIDLSFVYGEHFGDAEPFDGPSSGTGGGNLAHAFPPDIES 101
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVY 147
+++FD A+ W +G L A+HEIGH+LGL H +N YP Y
Sbjct: 102 ELRGDVHFDDAEKWTMDKTEGINLFQLAVHEIGHSLGLSHSRQHNSVMYPYY 153
>gi|76827525|gb|AAI07359.1| Mmp23 protein [Mus musculus]
Length = 377
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 27/122 (22%)
Query: 35 LTTHRLSFDITELNPNAQEVAR---WALGEWSKVVDLTFEETSIH--SDIKFI------- 82
LT LSF L+P +E R A WS V +F E + SD+K +
Sbjct: 94 LTYRVLSFPRNLLSP--EETRRGLAAAFRMWSDVSPFSFREVAPERPSDLKIVHHCFDGP 151
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVW-----RYGIGKGTILS---HNALHEIGHALGL 134
+ + P + I+FD ++ W RY KG L+ H A HEIGHALGL
Sbjct: 152 TGELAHAFFPPHGG-----IHFDDSEYWVLGPTRYSWKKGVWLTNLVHVAAHEIGHALGL 206
Query: 135 MH 136
MH
Sbjct: 207 MH 208
>gi|194043362|ref|XP_001929480.1| PREDICTED: stromelysin-3-like [Sus scrofa]
Length = 491
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFI 82
R++ LT L F + ++ AL WS V LTF E H+DI ++
Sbjct: 107 RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSDVTPLTFTEVHEGHADIMIDFTRYW 166
Query: 83 SSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N G + + + E ++FD + W G +GT L A HE GH LGL
Sbjct: 167 HGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTVGDNQGTDLLQVAAHEFGHVLGL 226
Query: 135 MH 136
H
Sbjct: 227 QH 228
>gi|77456361|ref|YP_345866.1| von Willebrand factor, type A [Pseudomonas fluorescens Pf0-1]
gi|77380364|gb|ABA71877.1| Large adhesive protein [Pseudomonas fluorescens Pf0-1]
Length = 5218
Score = 40.8 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G GND+++G + N+ GND+ G SG DTF + A
Sbjct: 5080 GGKGNDILLGGTGNDTLIGGQGNDILIGGSGADTFVWKA 5118
>gi|218675911|ref|YP_002394730.1| hypothetical protein VS_II0128 [Vibrio splendidus LGP32]
gi|218324179|emb|CAV25402.1| Hypothetical protein VS_II0128 [Vibrio splendidus LGP32]
Length = 522
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ D+ +GNS +N F +S N+ FDGS G D Y I + +
Sbjct: 438 IVGAEALDI-LGNSQDNYFEGNSANNTFDGSDGTDVLKINGNKNDYSIEKLAGGVTKISG 496
Query: 331 NEHKQDFLSDVERLRFADQCI 351
D +S+VE ++F D+ +
Sbjct: 497 KSIGTDKISNVEYIKFNDEVV 517
>gi|159044966|ref|YP_001533760.1| hypothetical protein Dshi_2425 [Dinoroseobacter shibae DFL 12]
gi|157912726|gb|ABV94159.1| hypothetical protein Dshi_2425 [Dinoroseobacter shibae DFL 12]
Length = 559
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENAI 325
E+V G+ NDV++GN+ +NV G+D G +G DTF F+ A + I FE I
Sbjct: 447 ENVTGTDSNDVIVGNAQDNVIRGGLGDDTMSGGAGADTFVFFEADIGVDVILDFEIGI 504
>gi|52078114|gb|AAU25837.1| lipase [Pseudomonas fluorescens]
Length = 616
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T+ SS+ G T+ + + G GND +IG + N+VF +GND+ + G DT
Sbjct: 484 TQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLLESGGGADT 543
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F L+ ++ ++ Y AN+ K FL L D + V Q ++L++ A
Sbjct: 544 F-------LFSGAFGQDRVVGYTAND-KLVFLGVQGVLPNDDFRAHATAVGQDTVLKFGA 595
Query: 367 SYEDLIQV 374
L+ V
Sbjct: 596 DSVTLVGV 603
>gi|302876330|ref|YP_003844963.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|302579187|gb|ADL53199.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
Length = 285
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
EE + F YL Y D+ G D +HY+ +G KEGR P Y S
Sbjct: 161 EEMKIRAFSRTWYLSQYQDVAK-NGID---PYQHYLAYGKKEGRQPLPPIPTGYTDSGYL 216
Query: 536 LIN---AFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ N A A + +G DH+ FG+ EGR T+
Sbjct: 217 ICNPDVAAAVNKGIFVSGLDHYYEFGWREGRKFTY 251
>gi|260557565|ref|ZP_05829780.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
19606]
gi|260409191|gb|EEX02494.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
19606]
Length = 2890
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+N TI + +++ G+SGND + G + N++ + +GND +G +G DT +
Sbjct: 2456 QNQTINGTSNADTLYGASGNDTLTGQAGNDILYGQAGNDTLNGGTGNDTMY 2506
>gi|291388662|ref|XP_002710873.1| PREDICTED: matrix metalloproteinase 24 [Oryctolagus cuniculus]
Length = 574
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 88/235 (37%), Gaps = 63/235 (26%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 80 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 132
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 133 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 192
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 193 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 242
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL--GNNIYKIEVQQKDSP 217
+PQD D+ +QKIYG P L + + V++ SP
Sbjct: 243 --LPQD----------------DLQGIQKIYGPPAEPLEPTRPLPTLPVRRMHSP 279
>gi|291415637|ref|XP_002724058.1| PREDICTED: matrix metalloproteinase 11 [Oryctolagus cuniculus]
Length = 492
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFI 82
R++ LT L F + + AL WS+V LTF E H+DI ++
Sbjct: 108 RWEKTDLTYRILRFPWQLVREQVRRTVAEALQVWSEVTPLTFTEVHEGHADIVIDFTRYW 167
Query: 83 SSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N G + + + E ++FD + W G +GT L A HE GH LGL
Sbjct: 168 HGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQVAAHEFGHVLGL 227
Query: 135 MH 136
H
Sbjct: 228 QH 229
>gi|170061521|ref|XP_001866269.1| interstitial collagenase [Culex quinquefasciatus]
gi|167879733|gb|EDS43116.1| interstitial collagenase [Culex quinquefasciatus]
Length = 485
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 40/181 (22%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--TSIHSDIK--FISS 84
++ V++ +++ + L + R A WS+V +L F E +I DI+ F S
Sbjct: 113 KWSKSVISYRIMNYPVRVLQSEIRAAVRHAFDAWSRVTNLDFVEDTRTIDVDIQLAFEGS 172
Query: 85 NN---GYVCTPRYDSRYFMEINFDKADV---WRYGIGKGTILSH---NALHEIGHALGLM 135
N+ G C YDS + DV +Y + T + A HEIGH+LGL+
Sbjct: 173 NHQRRGQPCRYSYDSTLAHAFFPEHGDVHFNTKYFFTEDTSIEQFINTATHEIGHSLGLL 232
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H S + S+M YF ++ A P DI A+Q +Y
Sbjct: 233 HSTSRD-------------------SIM-YFSQTSNLF-------AEPQPEDINAIQSLY 265
Query: 196 G 196
G
Sbjct: 266 G 266
>gi|124024797|ref|YP_001013913.1| hypothetical protein NATL1_00841 [Prochlorococcus marinus str.
NATL1A]
gi|123959865|gb|ABM74648.1| Hypothetical protein NATL1_00841 [Prochlorococcus marinus str.
NATL1A]
Length = 1584
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--- 332
G+D + G +++ F G+D DG G D FY YK R ++ + + D E
Sbjct: 1318 GDDRLEGGESSDKIFGGLGSDFIDGGEGEDIAFYAGNFEDYKFDRTKDTVSLEDQREGLN 1377
Query: 333 HKQDFLSDVERLRFADQCID 352
D L +VE ++FADQ +D
Sbjct: 1378 DGNDVLKNVEYIQFADQKVD 1397
>gi|83942092|ref|ZP_00954554.1| hypothetical protein EE36_07648 [Sulfitobacter sp. EE-36]
gi|83847912|gb|EAP85787.1| hypothetical protein EE36_07648 [Sulfitobacter sp. EE-36]
Length = 829
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L GG+ N ++ G N T++ + ++G G+D++ GN+ ++ +G
Sbjct: 690 LAGGINN---------DTVNGGSGNDTLSGDNGADQLIGGDGDDLIKGNAGHDTLDGGAG 740
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
NDV G G D F Y A I F+N I
Sbjct: 741 NDVLSGGIGADRFIYGAGQ--DTILSFQNEI 769
>gi|163735156|ref|ZP_02142592.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och 149]
gi|161391614|gb|EDQ15947.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och 149]
Length = 2672
Score = 40.8 bits (94), Expect = 0.84, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G +N I L++ + ++ G + + T ++G G D+++G + N+V G DV
Sbjct: 1052 GFENVIRLDSGA-GTLAGDDGANRLQDSTGDGVLIGRGGADMLLGGAGNDVLIGGLGADV 1110
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
DG +G DT Y + I A ++ E + D L D+ER+
Sbjct: 1111 LDGGAGTDTVSYADSTTSIFIREVPGAQMLGFRGEAQGDVLIDIERI 1157
>gi|328724695|ref|XP_003248224.1| PREDICTED: matrix metalloproteinase-16-like isoform 3
[Acyrthosiphon pisum]
Length = 583
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 56 RWALGEWSKVVDLTF---EETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEIN 103
R A WS V LTF + +H +I+F +G + Y + +
Sbjct: 144 RKAFDVWSDVTPLTFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFPVYGGDAH 203
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
FD ++ W G KGT L A HE GH+LGL H
Sbjct: 204 FDDSEKWSIGSFKGTNLFQVAAHEFGHSLGLSH 236
>gi|329851855|ref|ZP_08266536.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328839704|gb|EGF89277.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1261
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-----AIIV 327
G+SG ++++GNS NNV +G+D G G DTF A + E + I
Sbjct: 586 GNSGTNLIVGNSGNNVLDGGAGDDSLAGGLGNDTFIVEASGDVVTEASSEGTDEVQSSIT 645
Query: 328 YDANEHKQDF-LSDVERLRFADQCIDSVNV----KQRSILEYTASYEDLIQVIGQDVF-- 380
Y +H ++ L+ + + + +N+ +IL + + +G D F
Sbjct: 646 YVLGDHVENLSLTGGASINGSGNSL--INILTGNSGNNILTGGLGADSMAGGLGNDTFVV 703
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYL 405
E + GL EG DI S ++
Sbjct: 704 EDIGDVVTEGLDEGTDIVLASATFI 728
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
SW+ +G +N+T+ + I G+ G++VV GNS NN+ GND +G G DTFF
Sbjct: 321 SWA-LGSNLENLTLTGNANINGT-GNVGDNVVFGNSGNNMLDGGDGNDTLNGGLGDDTFF 378
Query: 309 YYA 311
A
Sbjct: 379 INA 381
>gi|218661658|ref|ZP_03517588.1| Hemolysin-type calcium-binding region [Rhizobium etli IE4771]
Length = 679
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY---YAPSYLYKIYRFENAIIV 327
V +G+D G N++F + G DV +G +G+DT + +A L IY E IV
Sbjct: 508 VKAGNGDDEFAGTDGNDIFEGNGGYDVINGGAGIDTAVFSSNFADYMLGVIYDNETHHIV 567
Query: 328 YD-ANEHKQDFLSDVERLRFAD-------QCIDSVNVKQRSI-LEYTASYED 370
+ + +D L+DVE RFAD Q S N +I L TA ED
Sbjct: 568 TSMSGQDYEDVLTDVEFARFADGVYEFATQTFTSTNNAPTNIQLSKTALSED 619
>gi|149204648|ref|ZP_01881613.1| calcium binding hemolysin protein, putative [Roseovarius sp. TM1035]
gi|149141907|gb|EDM29957.1| calcium binding hemolysin protein, putative [Roseovarius sp. TM1035]
Length = 1736
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LD +I + +N E+ S+ G + ++ I+ IE+V+G+ +D +IGN+ NN+
Sbjct: 1086 LDGAIIADSFGAVTVNLETGSATGAFGTDVLIS----IENVIGTGADDRLIGNALNNMLS 1141
Query: 291 ESSGNDVFDGSSGLDTFFYYA 311
+G+D F+G G D A
Sbjct: 1142 GGAGHDSFEGGGGDDILITGA 1162
>gi|307591306|ref|YP_003900105.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306986160|gb|ADN18039.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 1547
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR----FENAIIVY 328
G GND ++G ++ +GND DG G DT Y YK+ F+ I +
Sbjct: 306 GGKGNDELLGFDGDDTLSGGAGNDTIDGGDGTDTAIYSGNYADYKLTLSKADFKTVTITH 365
Query: 329 DANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D + D L++VE +F D+ + + +++ T S D I + E + +
Sbjct: 366 DGGTQEDGIDTLTNVEFAQFKDKKVPLKGLDLAFVIDTTGSMLDDIDAVKASTSEIINNI 425
Query: 387 YE 388
++
Sbjct: 426 FD 427
>gi|291570678|dbj|BAI92950.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 300
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 51/226 (22%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y A +++ + I +FE+ +HF +G EGR+ FDS YL +++
Sbjct: 13 YLAQNQEVEEAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPHIQSEVEEGIT 72
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AA H++ G + R+P+ F D + P + Q G +G F
Sbjct: 73 TAAAHFVNIGQTDNRSPNPFF---------DPVFYLQQNPTVSQ---------GVAKGEF 114
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
F+ +L +G + L + + T ++ RN DA + +E
Sbjct: 115 TAFEHFLKIGQFQGLD---------PSESFNTEFYRD-RNFDAVEGIE------------ 152
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
+++ + +HF FG E GR + P L DDL N D
Sbjct: 153 ---DEIIGSLFEHFYRFGLELGR-LGAPPQL----MDDLSNAIALD 190
>gi|302337197|ref|YP_003802403.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
gi|301634382|gb|ADK79809.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
Length = 1100
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 79/221 (35%), Gaps = 78/221 (35%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
R FD YL DL + RH++ G K RNP+AF
Sbjct: 48 RSAIFDENYYLRKNPDLYYTTAN----LMRHFLLTGYKAYRNPNAF-------------- 89
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
FDS Y +Y D++ V G + HYI +G
Sbjct: 90 ----------------------------FDSKYYEETYPDVKKV-GMN---PVIHYIMYG 117
Query: 515 VKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKD---HFSNFGYEEG-------- 562
V+EG+NP F L Y+ S+ PD+ + G + H+ G+ +G
Sbjct: 118 VEEGKNPHPEFDTLFYLRSY----------PDVAEKGVNPLGHYIKIGWRKGNRPNPFMV 167
Query: 563 -RSITFNPDLYLTSYDDL-----WNVFGSDRSAAAQHYITH 597
R TF P L + L ++++ D + YI+H
Sbjct: 168 ERDCTFLPAFPLQDHSALSIVVVFHIYHEDLVGSCLQYISH 208
>gi|78183644|ref|YP_376078.1| peptidase, metallopeptidase [Synechococcus sp. CC9902]
gi|78167938|gb|ABB25035.1| Peptidase, metallopeptidases [Synechococcus sp. CC9902]
Length = 421
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 97/249 (38%), Gaps = 58/249 (23%)
Query: 87 GYVCTPRYDSR-YFMEI-----NFD-KADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
G + R +S YF EI FD D +RY + +HEIGH LGL HP
Sbjct: 108 GLAVSNRNNSNGYFWEIFLNEPKFDGDQDYFRYAL----------IHEIGHTLGLEHPFE 157
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQD------------SMMDASFGYCATPMVSD 187
N G V G+ + +++ +VM+Y P + + + +G P S
Sbjct: 158 DNDGDVVDGITDPWKSLYPEDTVMAYRNPANGRWPNDYTSNDKAALIELWGQETNPTPS- 216
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLDLTLIGGVKNY 242
V +K G + +N + + K I TI GG+D L GG+ N
Sbjct: 217 -VTPEKPNGLSAQVMDSNSTRFKGTSKADWIIGNDGNNTIKAKGGNDYLQ----GGLGN- 270
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ G N T+ G G+D++ G +++ G DV G+S
Sbjct: 271 --------DRLNGNNGNDTLR---------GGDGDDIIHGGKGSDIIRGGRGADVLYGNS 313
Query: 303 GLDTFFYYA 311
G +TF A
Sbjct: 314 GQNTFSSTA 322
>gi|70733640|ref|YP_257280.1| calcium-binding outer membrane-like protein [Pseudomonas fluorescens
Pf-5]
gi|68347939|gb|AAY95545.1| calcium-binding outer membrane-like protein [Pseudomonas fluorescens
Pf-5]
Length = 4920
Score = 40.4 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G GND+++G + N+ GND+ G SG DTF + A
Sbjct: 4783 GGKGNDILLGGTGNDTLIGGQGNDILIGGSGADTFVWKA 4821
Score = 37.7 bits (86), Expect = 5.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGS 301
+D++ + S++ Y I +H V GS GND ++G + N++ F GND+ DG
Sbjct: 4730 VDVSKVTTSNVHQY-----ITEHYTEFDVSGSHDGNDTLLGGAGNDILFGQGGNDLLDGG 4784
Query: 302 SGLDTFF 308
G D
Sbjct: 4785 KGNDILL 4791
>gi|291520013|emb|CBK75234.1| Uncharacterized vancomycin resistance protein [Butyrivibrio
fibrisolvens 16/4]
Length = 290
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGA 421
Y A Y +L Q D + H+ G++EGR+ TF++ Y+ DL V+G A
Sbjct: 54 YAAMYPNLAQQANGDQLWLLMHYAYCGINEGRNASATFNATDYMNKNPDLVAVYGDYMPA 113
Query: 422 AARHYITHGVKEGRN 436
A HY+ G EGR+
Sbjct: 114 YAFHYVYAGRLEGRD 128
>gi|148242014|ref|YP_001227171.1| hypothetical protein SynRCC307_0915 [Synechococcus sp. RCC307]
gi|147850324|emb|CAK27818.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 1915
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D G N I+LN+ W + G ++ ++I E+V SGNDVV GN N
Sbjct: 1751 DTAQFSGRSNRINLNSTRWQNTRDGRDRLISI------ENVNAGSGNDVVTGNRGANTLN 1804
Query: 291 ESSGNDVFDGSSGLDTFF 308
+GNDV +G SG D
Sbjct: 1805 GQNGNDVLNGGSGNDKLV 1822
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 227 GDDLL------DLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDV 279
GDD + D G N I+LNT W + G G ++ ++I E+V SGND+
Sbjct: 1654 GDDTINGGSGRDTAQFSGRNNCINLNTTKWQNTGDGRDRLISI------ENVNAGSGNDI 1707
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFF 308
V GN + N +G+D G +G D +
Sbjct: 1708 VKGNRSANTLNGQNGDDKLYGGNGNDVMY 1736
>gi|186687000|ref|YP_001870389.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
gi|186469624|gb|ACC85421.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
Length = 2495
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 222 IYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ D G GDDL+D I LN+ES + + A + VI G G+D++
Sbjct: 1654 VIDGGAGDDLIDGDGI--------LNSESTPN--------SSAANDVIN---GGQGDDIL 1694
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-RFENAIIVYDA----NEHKQ 335
+G ++ G+D+ DG G DT YKI R + +++V D N
Sbjct: 1695 LGGIGDDRLIPGKGDDLIDGGEGTDTGVASGKQENYKIRKRLDGSVVVIDRRTSDNNEGL 1754
Query: 336 DFLSDVERLRFADQCI 351
+ D ER F+D+ +
Sbjct: 1755 ELYRDTERFEFSDRTL 1770
>gi|308205902|gb|ADO19311.1| hypothetical protein Nfla_9703 [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 334
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+SV G GND +IGN N+ S GND+ +G +G DT
Sbjct: 31 DSVRGGDGNDTLIGNDGNDTLIGSVGNDILNGGAGNDTLL 70
>gi|281346053|gb|EFB21637.1| hypothetical protein PANDA_004527 [Ailuropoda melanoleuca]
Length = 564
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 81/225 (36%), Gaps = 75/225 (33%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 70 RRSKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 122
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 123 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 182
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF- 166
W G G L A+HE+GHALGL H ND +++M+ F
Sbjct: 183 WTLGNANHDGNDLFLVAVHELGHALGLEH-----------------SNDP--SAIMAPFY 223
Query: 167 ---------MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 224 QYMETHNFKLPQD----------------DLQGIQKIYGPPAEPL 252
>gi|152993316|ref|YP_001359037.1| hypothetical protein SUN_1733 [Sulfurovum sp. NBC37-1]
gi|151425177|dbj|BAF72680.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 1395
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 36/189 (19%)
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ E +T + Y Y + NV+ H++ +G EG+NP+ +E+ +
Sbjct: 124 NIEESDKLTIEPYFDKEWYQKMFNVYDI---CPIEHFLRYGSFEGKNPNPDFDVEWYLN- 179
Query: 450 EDLINAFADAPDLVQVGKD---HFSNFGCEEGRFVTFDS------------YLYLGSYDD 494
+ PD+ + G + HF FG EG+F D Y Y
Sbjct: 180 --------EYPDVKESGLNPFIHFIQFGKAEGKFQNPDEKYLQENIKIIEPYFDKEWYQK 231
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ NV+ H++ +G EG+NP+ +E+ +N + D + HF
Sbjct: 232 MFNVYDI---CPIEHFLRYGSFEGKNPNPDFDVEW------YLNEYPDVKESSLNSFVHF 282
Query: 555 SNFGYEEGR 563
FG EGR
Sbjct: 283 IQFGKVEGR 291
>gi|56696501|ref|YP_166858.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56678238|gb|AAV94904.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 1003
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ GDD L + +++GG+ N ++ G + N T+ + +S+VG +G
Sbjct: 597 LFGQAGDDTLIGGDGNDSILGGIGNDSLRGGNGDDTLSGSDGNDTLIGDSGRDSLVGGAG 656
Query: 277 ND---------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+D ++G + N+ FF+ G+D+ GS G D FF + F++ +
Sbjct: 657 DDSLQGGADADTLVGGTGNDSFFDGGGDDLVLGSEGDDLFFLGGGHNTIGDFGFDSG-LK 715
Query: 328 YDANEHKQDFLS 339
D N+ DF++
Sbjct: 716 NDGNQSNNDFVN 727
>gi|320101679|ref|YP_004177270.1| hypothetical protein Isop_0124 [Isosphaera pallida ATCC 43644]
gi|319748961|gb|ADV60721.1| hypothetical protein Isop_0124 [Isosphaera pallida ATCC 43644]
Length = 2205
Score = 40.4 bits (93), Expect = 0.93, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GDDLLD GG + + ++ G N T++ + + G +GND++
Sbjct: 1943 LFGRDGDDLLD----GGTGDDLLFGGNGNDTLFGGAGNDTLSGGAGNDLLRGGAGNDLLF 1998
Query: 282 GNSANNVFFESSGNDVFDGSSGLD 305
GN N+ F +G+D G +G D
Sbjct: 1999 GNEGNDTLFGGAGDDTLQGGAGDD 2022
Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G +GND + G S N++ F G+D+ DG +G D F
Sbjct: 1924 TLSGGAGNDTIRGGSGNDLLFGRDGDDLLDGGTGDDLLF 1962
>gi|146305757|ref|YP_001186222.1| hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
gi|145573958|gb|ABP83490.1| Hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
Length = 851
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N I + + + G G+D + G + +++ F +GND+ DG G+DT +
Sbjct: 318 GGAGNDKITGNAGSDELYGGDGDDQLFGLAGDDLLFGGAGNDLLDGGKGVDTMVGGSGD- 376
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDS----VNVKQRSILEYTASY 368
IY ++ + N+H D D ++ LR + + S VN+ ++LE
Sbjct: 377 --DIYILDDHRELERINQHGSDIYHDPGIDTLRITYKSMASAPLTVNLNAINLLEI---- 430
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ +Q+IG FE + + + L GR
Sbjct: 431 -ENVQLIGAGPFEVLGNGLDNRLDAGR 456
>gi|9438193|gb|AAF87594.1|AF286062_7 LipA [Pseudomonas brassicacearum]
Length = 619
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
SSI G N T+ + + G GNDV++G + N+ F +GND G DTF +
Sbjct: 489 SSIKGSAANDTLVAGAKGDWLFGQDGNDVLVGGAGNDTFVGGAGNDQMQAGGGSDTFLF 547
>gi|241205215|ref|YP_002976311.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859105|gb|ACS56772.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 942
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS---IGGYEKNMTIAQHTVIESVVGSSGND 278
+Y+ G + ++ LTL ++DL+ E + I G + +A + + G+ GND
Sbjct: 595 VYEPGYESIISLTLTDSA--HVDLSDELATRSAYISGTAFGIDVATGGGSDQLEGTDGND 652
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + N+ GND+ G +G+DT + Y + +N + + +D L
Sbjct: 653 IFDGGAGNDRIDGYGGNDMLFGGTGIDTAVFSGDFASYS-FAIDNGSHILTSALEGKDTL 711
Query: 339 SDVERLRFADQCID 352
+DVE RFAD D
Sbjct: 712 TDVEFARFADGVYD 725
>gi|159045303|ref|YP_001534097.1| hypothetical protein Dshi_2763 [Dinoroseobacter shibae DFL 12]
gi|157913063|gb|ABV94496.1| hypothetical protein Dshi_2763 [Dinoroseobacter shibae DFL 12]
Length = 554
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G +GND++IG +VFF ++GND+ G+ G+D F++
Sbjct: 435 GGAGNDIMIGGDLADVFFGNTGNDIMVGNGGVDAFYF 471
>gi|330965204|gb|EGH65464.1| Ig family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 559
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N+T+ + ++++ G SGND + G + N+ ++GND DG +G DT S Y
Sbjct: 198 QNLTLTGTSGVDTLTGRSGNDTLSGAAGNDTLIGNAGNDRLDGGTGNDTMRGGIGSDTYV 257
Query: 318 IYRFENAI 325
+ +A+
Sbjct: 258 VDSASDAV 265
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
AP ++G K+ + K G D+LD+ + V+N T ++ G
Sbjct: 165 APTSAIGTTSVKVTAKDKSGLT--------GSDVLDIVVT--VQNLTLTGTSGVDTLTGR 214
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N T++ G++GND +IGN+ N+ +GND G G DT+ + S
Sbjct: 215 SGNDTLS---------GAAGNDTLIGNAGNDRLDGGTGNDTMRGGIGSDTYVVDSAS 262
>gi|254416848|ref|ZP_05030597.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196176394|gb|EDX71409.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 321
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E++ ++ G +N TI ++ +VG SGND +IG S N+ GNDV G SG D
Sbjct: 138 ENFINVTGTSQNDTIIGNSADNLLVGGSGNDTLIGGSGNDRLVGGDGNDVLTGGSGND 195
>gi|217038328|gb|ACJ76621.1| matrix metalloproteinase 24 preproprotein (predicted) [Oryctolagus
cuniculus]
Length = 532
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 88/235 (37%), Gaps = 63/235 (26%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 38 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 90
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 91 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 150
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 151 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 200
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL--GNNIYKIEVQQKDSP 217
+PQD D+ +QKIYG P L + + V++ SP
Sbjct: 201 --LPQD----------------DLQGIQKIYGPPAEPLEPTRPLPTLPVRRMHSP 237
>gi|260818324|ref|XP_002604333.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
gi|229289659|gb|EEN60344.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
Length = 524
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 36/153 (23%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
IAD+ L W I Y+ + T + +TE ++ R A G WS LTF E
Sbjct: 133 IADYQLSGTKWEKNHITYRIENFTPY-----LTEQE--VRDTVRTAFGVWSDYTPLTFSE 185
Query: 73 ------TSIHSDIKFISSNNG--------------------YVCTPRYDSRYFM---EIN 103
T + ++F S ++G + P DS + + +
Sbjct: 186 VRDRDRTDVDILVEFTSGDHGDNSPFDGRYVPGTGRGQNLAHAFQPPRDSHSYRIDGDSH 245
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
FD + W +G L A+HE GHALG+ H
Sbjct: 246 FDGDEEWTLNTDRGVNLLIVAIHEFGHALGISH 278
>gi|148674197|gb|EDL06144.1| matrix metallopeptidase 24 [Mus musculus]
Length = 570
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 81/225 (36%), Gaps = 75/225 (33%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 76 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 128
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 129 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 188
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF- 166
W G G L A+HE+GHALGL H ND +++M+ F
Sbjct: 189 WTLGNANHDGNDLFLVAVHELGHALGLEH-----------------SNDP--SAIMAPFY 229
Query: 167 ---------MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 230 QYMETHNFKLPQD----------------DLQGIQKIYGPPAEPL 258
>gi|5545323|dbj|BAA82538.1| ORF12 [Actinobacillus actinomycetemcomitans]
Length = 1416
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 376 GQDVFES----MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
QDV E+ ++HF ++G EGR+ + FD YL SY+D++ S HY+ +
Sbjct: 621 NQDVREANVDPIQHFLDYGWKEGRNPSPKFDLNSYLDSYNDVK----SANINPLLHYVKY 676
Query: 430 GVKEGR--NPDAFKALEYIASHEDLINAFADAPDLV 463
G KEGR P F L I +++I P L+
Sbjct: 677 GKKEGRKIKPVEFGMLYLI---KNMIFLIKKNPSLI 709
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
R F + Y+ +++D+ A D +Q HF ++G++EGR+ + P L SY D
Sbjct: 607 RKSGLFNSEYYLNNNQDVREANVDP---IQ----HFLDYGWKEGRNPS--PKFDLNSYLD 657
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRAL 605
+N S HY+ +G KEGR +
Sbjct: 658 SYNDVKSANINPLLHYVKYGKKEGRKI 684
>gi|304393444|ref|ZP_07375372.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
gi|303294451|gb|EFL88823.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
Length = 571
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ NDV+ G N+ F S+GND DG G + Y S Y + + + V N
Sbjct: 193 GTDDNDVLTGGEGNDGFLGSAGNDTIDGGEGYNQIDYAGSSSDYSVTLDGDTLTVVKPNG 252
Query: 333 HKQDFLSDVERLRF 346
D +S+V + F
Sbjct: 253 EGTDTVSNVSGVYF 266
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDAN 331
G+ G+DV+ G N+ F +GNDV DG G + Y S Y+ + ++ V N
Sbjct: 327 GTDGDDVLTGGDGNDGFLGYAGNDVIDGGEGYNQVDYTGSSTDYQAGIAADGSVTVIKPN 386
Query: 332 EHKQDFLSDVERLRFA 347
D L +V+ + FA
Sbjct: 387 GEGTDTLVNVDGIYFA 402
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G+ +DV+ G ++ F E+ GND DG +G + Y S Y I R + + V
Sbjct: 54 EDIFGTDSDDVLTGKEGDDGFLETKGNDTVDGGAGRNQIDYLGSSSEYAITRDGDTLTVV 113
Query: 329 DANEHKQDFLSDVERLRF 346
N D +++V + F
Sbjct: 114 KLN-GGTDTVTNVSGVYF 130
>gi|73998988|ref|XP_854180.1| PREDICTED: similar to matrix metalloproteinase 21 preproprotein
[Canis familiaris]
Length = 552
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 50/170 (29%)
Query: 52 QEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
+ + R A WS+V+ L F E DIK ++ PR F + A
Sbjct: 178 RRILRLAFRMWSEVMPLHFREDLAAPGAAVDIKLAFGRGRHLGCPRV----FDGSGQEFA 233
Query: 108 DVWRYG--------------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
WR G G L A+HEIGH LGL H +Y G
Sbjct: 234 HAWRLGDIHFDDDEHFTPPTSDSGISLLKVAVHEIGHVLGLPH--TYRAG---------- 281
Query: 154 ENDSFLTSVMSY-FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+M ++PQ+ + + + SD A+QK+YG+ +GS
Sbjct: 282 -------SIMQPNYVPQEPVFELDW--------SDRKAIQKLYGSCEGSF 316
>gi|222148481|ref|YP_002549438.1| hypothetical protein Avi_2010 [Agrobacterium vitis S4]
gi|221735469|gb|ACM36432.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 678
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARH 509
L NA P HF G +G + FD++ YL YDD+RN G + H
Sbjct: 570 LKNALITPPSAPIDAALHFVKAGFSQGLWPNAFFDTHWYLSQYDDIRNS-GIN---PLWH 625
Query: 510 YITHGVKEGRNPD-AFKALEYIASHEDL----INAFADAPDLVQAGKDHFSNFGYEEGRS 564
Y +G KE R+P F Y+A++ D+ IN HF G EGRS
Sbjct: 626 YHINGWKERRDPSRKFSTAFYLAAYPDIQVANINPL-----------QHFLRHGQHEGRS 674
Query: 565 I 565
I
Sbjct: 675 I 675
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Query: 385 HFYEFGLSEG--RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFK 441
HF + G S+G + FD++ YL YDD+RN G + HY +G KE R+P F
Sbjct: 587 HFVKAGFSQGLWPNAFFDTHWYLSQYDDIRNS-GIN---PLWHYHINGWKERRDPSRKFS 642
Query: 442 ALEYIASHEDLINAFADAPDLVQVGK----DHFSNFGCEEGRFV 481
Y+A++ D +QV HF G EGR +
Sbjct: 643 TAFYLAAYPD-----------IQVANINPLQHFLRHGQHEGRSI 675
>gi|260818326|ref|XP_002604334.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
gi|229289660|gb|EEN60345.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
Length = 423
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 40/158 (25%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
+A + L W+ + Y+ + LT+H +TE A+E R A WS LTF
Sbjct: 40 LARYALSGTKWAKNDLTYRLESLTSH-----LTETE--AREAIRDAFRVWSDYTPLTF-- 90
Query: 73 TSIHSD-----IKFISSNNG---------------------YVCTPRYDSRYFME--INF 104
T++ S IKF + ++ PR + Y+++ +F
Sbjct: 91 TAVPSGRADIIIKFSTGDHQDGSPFDGRFDFHTGRGLRLAHAFQPPRDSNTYYIDGDTHF 150
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMH---PGS 139
D ++W +GT L A+HE GHALGL H PG+
Sbjct: 151 DADELWTLNSPEGTNLFQVAVHEFGHALGLSHTPVPGT 188
>gi|196233287|ref|ZP_03132132.1| alpha amylase, catalytic region [Chthoniobacter flavus Ellin428]
gi|196222592|gb|EDY17117.1| alpha amylase, catalytic region [Chthoniobacter flavus Ellin428]
Length = 774
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 349 QCIDSVNVKQR-----SILEYTASYEDLIQVIGQDVFESMKH----FYEFGLSEGRDITF 399
QCID N K R S+ E A YE I+ G D F S +H +E GL+E
Sbjct: 66 QCIDPYN-KDRWSGVFSVFE-NAVYEYTIEAWG-DYFRSWQHEFQVKFEAGLTELTSEIL 122
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ ++G L G R A ++ V+EG NP+ AL + E L+ A+AD
Sbjct: 123 EGASFVGRAAKLAQDQGQKRDAERLVVLSDKVREG-NPETVNALAHSPEMEALMTAYAD 180
>gi|21425408|emb|CAD19995.2| metalloprotease III [Ostertagia ostertagi]
Length = 507
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 22/135 (16%)
Query: 30 YKPDVLTTHRLSFDITE-LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY 88
Y PD + + + E +P +++ + +W + F E + FIS
Sbjct: 152 YNPDSIWVDGVFYRFDESTDPRTKKIFELSAKQWENATCIDFTEDKEEKEPHFISVVKSE 211
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
C F EI D W +GKG A HEIGHALGL H +
Sbjct: 212 GC--------FSEIGRVGFDQW-LSLGKGCDXIGIATHEIGHALGLFHTMAR-------- 254
Query: 149 VDNDYENDSFLTSVM 163
Y+ D F+T V+
Sbjct: 255 ----YDRDDFITVVI 265
>gi|12643347|sp|Q9R0S2|MMP24_MOUSE RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|5689227|dbj|BAA82966.1| membrane-type-5 matrix metalloproteinase [Mus musculus]
Length = 618
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 81/225 (36%), Gaps = 75/225 (33%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 124 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 176
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 177 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 236
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF- 166
W G G L A+HE+GHALGL H ND +++M+ F
Sbjct: 237 WTLGNANHDGNDLFLVAVHELGHALGLEH-----------------SNDP--SAIMAPFY 277
Query: 167 ---------MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 278 QYMETHNFKLPQD----------------DLQGIQKIYGPPAEPL 306
>gi|330809669|ref|YP_004354131.1| Triacylglycerol lipase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377777|gb|AEA69127.1| Triacylglycerol lipase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 617
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
SSI G N T+ + + G GNDV++G + N+ F +GND G DTF +
Sbjct: 489 SSIKGSAANDTLVAGAKGDWLFGQDGNDVLVGGAGNDTFVGGAGNDQMQAGGGSDTFLF 547
>gi|220922698|ref|YP_002498000.1| hypothetical protein Mnod_2744 [Methylobacterium nodulans ORS 2060]
gi|219947305|gb|ACL57697.1| hypothetical protein Mnod_2744 [Methylobacterium nodulans ORS 2060]
Length = 133
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLRNVFGS 501
Y+ ++D+ A A V+ K HF +G EGR + D YL Y D+R S
Sbjct: 47 YLERYQDVKAAIAAGS--VKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREYPDVRAAIES 104
Query: 502 -DRGAAARHYITHGVKEGRNP 521
+ A H+ T G +EGR P
Sbjct: 105 GEIPDATTHFHTAGAREGRIP 125
>gi|304320945|ref|YP_003854588.1| iron-regulated protein FrpC [Parvularcula bermudensis HTCC2503]
gi|303299847|gb|ADM09446.1| iron-regulated protein FrpC [Parvularcula bermudensis HTCC2503]
Length = 280
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + W I G N T+ + + G +GND +IG + +GNDV DG+SG
Sbjct: 116 VGDDGWDRISGRAGNDTLIGSDGRDLLEGGAGNDRLIGWDGVDTLVGGAGNDVLDGNSGN 175
Query: 305 DTFFY 309
DT Y
Sbjct: 176 DTLIY 180
>gi|209526449|ref|ZP_03274976.1| hypothetical protein AmaxDRAFT_3800 [Arthrospira maxima CS-328]
gi|209493084|gb|EDZ93412.1| hypothetical protein AmaxDRAFT_3800 [Arthrospira maxima CS-328]
Length = 300
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRG 420
Y A +D+ I VFE+ +HF +G EGR + FD YL D+++ +
Sbjct: 13 YLAQNQDVKDAIANGVFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPDIQSEVEAGIT 72
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AA H++ G + +P+ F D + P + Q G G F
Sbjct: 73 TAAAHFVNIGQTDNLSPNPFF---------DPVFYLQQNPSVAQ---------GVANGEF 114
Query: 481 VTFDSYLYLGSYDDL 495
F+ + +G + L
Sbjct: 115 TAFEHFFKIGQFQGL 129
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSD 502
Y+A ++D+ +A A+ + + +HFS +G EGR FD YL D+++ +
Sbjct: 13 YLAQNQDVKDAIANG--VFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPDIQSEVEAG 70
Query: 503 RGAAARHYITHGVKEGRNPDAF 524
AA H++ G + +P+ F
Sbjct: 71 ITTAAAHFVNIGQTDNLSPNPF 92
>gi|86144669|ref|ZP_01063001.1| putative lipoprotein [Vibrio sp. MED222]
gi|85837568|gb|EAQ55680.1| putative lipoprotein [Vibrio sp. MED222]
Length = 522
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VGS D+ +GN +N F +S N+ FDGS G D Y I + +
Sbjct: 438 IVGSEALDI-LGNPQDNYFEGNSANNTFDGSDGTDVLKINGNKNDYSIEKLAGGVTKISG 496
Query: 331 NEHKQDFLSDVERLRFADQCI 351
D +S+VE ++F D+ +
Sbjct: 497 KSIGTDKISNVEYIKFNDEVV 517
>gi|23015941|ref|ZP_00055704.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 12295
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH----K 334
+ G ++ F +GNDVFDG G D ++ Y+I + V D N
Sbjct: 4176 TMTGGIGSDTFTGGAGNDVFDGGYGTDKAAFHGSEAGYRISMANGTVTVTDTNTADGNDG 4235
Query: 335 QDFLSDVERLRFADQCI 351
D L VE L+F+D +
Sbjct: 4236 TDTLVGVETLQFSDGSL 4252
>gi|192289967|ref|YP_001990572.1| 5'-nucleotidase [Rhodopseudomonas palustris TIE-1]
gi|192283716|gb|ACF00097.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris TIE-1]
Length = 2775
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYD-A 330
G + ND + GN +++ +G+D DG +G DT Y Y + + ++ V D A
Sbjct: 2312 GGADNDTLFGNDGDDLIKGGAGDDTIDGGAGADTATYAGNFVGYAMSLNTDGSLTVTDQA 2371
Query: 331 NEHKQDFLSDVERLRFAD 348
+ D LS++E+L FAD
Sbjct: 2372 GTNGTDKLSNIEQLGFAD 2389
>gi|297458750|ref|XP_616761.4| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
taurus]
Length = 568
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 74 RRHKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 126
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 127 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 186
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 187 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 236
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 237 --LPQD----------------DLQGIQKIYGPPAEPL 256
>gi|156544458|ref|XP_001607648.1| PREDICTED: similar to matrix metalloproteinase [Nasonia
vitripennis]
Length = 527
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 78/188 (41%), Gaps = 53/188 (28%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP-RYDSR-------YFM--- 100
+E+AR AL W+K LTF E + + IS + GY +D R +F
Sbjct: 18 RELAR-ALDVWAKNSKLTFHEINSDAADILISFHRGYHGDGYPFDGRGQILAHAFFPGSD 76
Query: 101 ---EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG--YPVY-GVDNDYE 154
+ +FD+ + W GT L A HE GH+LGL H S G YP Y G+ DYE
Sbjct: 77 RGGDAHFDEEEEWTLD-SSGTSLFAVAAHEFGHSLGLAH-SSVRGALMYPWYQGITEDYE 134
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GNNI----YKI 209
+P+D D +Q++YGAP+ L G N Y+
Sbjct: 135 ------------LPED----------------DKHGIQQMYGAPESRLWGKNPDYPGYRP 166
Query: 210 EVQQKDSP 217
V + P
Sbjct: 167 PVHRPSYP 174
>gi|172037004|ref|YP_001803505.1| hypothetical protein cce_2089 [Cyanothece sp. ATCC 51142]
gi|171698458|gb|ACB51439.1| hypothetical protein cce_2089 [Cyanothece sp. ATCC 51142]
Length = 1687
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ GS+GND + G + N+V +GNDV +G SG D F + A +I FE
Sbjct: 1579 LTGSTGNDTLSGGTGNDVLTGGAGNDVLNGGSGGDIFNFSANEGRDRIEDFE 1630
>gi|37572572|dbj|BAC98501.1| lipase [Pseudomonas fluorescens]
Length = 558
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
SS+ G T+ H + + G GND +IG + N+VF +GND+ + G DTF +
Sbjct: 489 SSVKGSNGADTLKAHAGGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLF 547
>gi|251825696|gb|ACT20898.1| protease [Microbacterium sp. SRC-008]
gi|251825706|gb|ACT20903.1| protease [Bacillus sp. SRC-007]
Length = 125
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 126 HEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSY 165
HEIGH LGL HPG YN G P Y D Y D+ S MSY
Sbjct: 85 HEIGHTLGLSHPGDYNAGEGDPTY-ADATYAEDTRAYSGMSY 125
>gi|242013009|ref|XP_002427215.1| Matrix metalloproteinase, putative [Pediculus humanus corporis]
gi|212511510|gb|EEB14477.1| Matrix metalloproteinase, putative [Pediculus humanus corporis]
Length = 542
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 98/279 (35%), Gaps = 73/279 (26%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + R + L+ W + + YK ++ + + +E++ V A WS
Sbjct: 98 VTSNSRSKRYALQGSRWKVHNLTYK---ISKYPRALKKSEVD----SVVERAFKVWSDYT 150
Query: 67 DLTF---EETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGI 114
DLTF + S+H D++F +G Y Y + +FD + W
Sbjct: 151 DLTFTLKKSGSVHIDVRFERGEHGDGDPFDGRGGTLAHAYFPIYGGDAHFDDDERWTVKS 210
Query: 115 GKGTILSHNALHEIGHALGLMH--------PGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
GT L A HE GH+LGL H Y G P + +D+D
Sbjct: 211 YSGTNLFQVAAHEFGHSLGLSHSDIRSALMAPYYRGYQPYFELDSD-------------- 256
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG-----NNIYK----IEVQQKDSP 217
DI +Q +YG G+ G N+IY + D+
Sbjct: 257 --------------------DIRGIQILYGKKSGNKGTTESPNSIYDDDELCSLSSVDTI 296
Query: 218 FI---QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
FI + Y GD LT G Y ++SW +
Sbjct: 297 FIDAKENTYVFKGDKYWRLTDDGMAPGYPKTISKSWPGL 335
>gi|88809711|ref|ZP_01125218.1| putative hemolysin-adenlyate cyclase protein [Synechococcus sp. WH
7805]
gi|88786461|gb|EAR17621.1| putative hemolysin-adenlyate cyclase protein [Synechococcus sp. WH
7805]
Length = 1267
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 86/222 (38%), Gaps = 40/222 (18%)
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMS 164
ADV GIG I N I G G ++G ND N +
Sbjct: 562 NADVLSGGIGNDFITGRNGADLIDGGTGDDTLLGNAGNDTIFGSTGNDRINGGGRNDTLD 621
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y ++ G T S +A + A GSLGN+ V + +PF TI
Sbjct: 622 Y---------SNLGGAVTLGGSGDIAKGVVDAAGVGSLGNDQL---VGESTAPFTNTIE- 668
Query: 225 SGGDDLLDLTLIGGVK--NYID--LNTESWSS--IGGYEKNMTIAQHTV----------- 267
+IG N ID LN S + E+ +T+ +T
Sbjct: 669 ---------KIIGNANFTNTIDGQLNAAGNGSFVVNLAEETLTVNVNTTNVGPFNFQVVN 719
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++VVG+ +D+++GN NNVF SSG D+ DG G DT Y
Sbjct: 720 FDNVVGTDNSDLIVGNDNNNVFTGSSGFDLLDGGDGFDTADY 761
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
++FG T S +A + A GSLGN+ I I+ D+ F TI +L
Sbjct: 882 SNFGGAVTLGGSGDIAKGVVDAAGIGSLGNDTIANIQTIIGDANFTNTIDG-------EL 934
Query: 234 TLIGGVKNYIDLNTE------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
G +DL+ E S +G + N+ ++V G+ D + GN +N
Sbjct: 935 NAAGNGSFVVDLSQELLTVNISTPGVGPFTFNVE-----NFDNVDGTDNTDNIKGNDNDN 989
Query: 288 VFFESSGNDVFDGSSGLDTFFYYA 311
VF S+GNDVF+GS G DT Y
Sbjct: 990 VFGGSAGNDVFNGSGGTDTIDYTG 1013
>gi|254473637|ref|ZP_05087033.1| bacteriocin [Pseudovibrio sp. JE062]
gi|211957349|gb|EEA92553.1| bacteriocin [Pseudovibrio sp. JE062]
Length = 1285
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 14/120 (11%)
Query: 208 KIEVQQKDSPFIQT-----IYDSGGDDLLDLTLIGGVKNY------IDLNTESWSSIGGY 256
K+ D F+ T IY S G D +D + NY + +N + GGY
Sbjct: 110 KLYGSDGDDTFVGTSGRDEIYGSEGADTIDGQGGTDIINYLLSDAGVTVNLATGQGSGGY 169
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I+ +ES++GS +DV+IG+ NN F +GND +G G D Y Y
Sbjct: 170 AEGDQISN---VESIIGSYHDDVLIGDDGNNNLFAQNGNDHLEGGGGDDWLNAYGSGSDY 226
>gi|281182734|ref|NP_001162479.1| matrix metalloproteinase-24 [Papio anubis]
gi|297259948|ref|XP_001100890.2| PREDICTED: matrix metalloproteinase-24 [Macaca mulatta]
gi|164623742|gb|ABY64668.1| matrix metallopeptidase 24 (predicted) [Papio anubis]
Length = 598
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 104 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 156
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 157 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 216
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 217 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 266
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 267 --LPQD----------------DLQGIQKIYGPPAEPL 286
>gi|4191265|emb|CAA09055.1| MT5-MMP protein [Mus musculus]
Length = 614
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 88/242 (36%), Gaps = 77/242 (31%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 120 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 172
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 173 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 232
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF- 166
W G G L A+HE+GHALGL H ND +++M+ F
Sbjct: 233 WTLGNANHDGNDLFLVAVHELGHALGLEH-----------------SNDP--SAIMAPFY 273
Query: 167 ---------MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG--NNIYKIEVQQKD 215
+PQD D+ +QKIYG P G + + V++
Sbjct: 274 QYMETHNFKLPQD----------------DLQGIQKIYGPPAEPSGATRPLPTLPVRRIH 317
Query: 216 SP 217
SP
Sbjct: 318 SP 319
>gi|17555226|ref|NP_498599.1| hypothetical protein T21D11.1 [Caenorhabditis elegans]
gi|8650109|gb|AAF78096.1| MMP-like protein [Caenorhabditis elegans]
gi|15011832|gb|AAA50663.2| Hypothetical protein T21D11.1 [Caenorhabditis elegans]
Length = 279
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 38/157 (24%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA---QEVARWALG 60
IKP+ R +++R + W + + ++ L T L L+P+ + A
Sbjct: 30 IKPIGFGSREKRYVIRAKRWKKHTLTWQ---LQTQNL------LDPDVFIVRNTMHRAFN 80
Query: 61 EWSKVVDLTFEETSI------------------HSDIKFISSNNGYVCT---PRYDSRYF 99
EWS V + F E HSD +G V PR D R
Sbjct: 81 EWSTVSSVDFREIPPDLVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYPR-DGR-- 137
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
++FD + W +G L A+HEIGH LGL H
Sbjct: 138 --LHFDAEEQWSLNSVEGVNLFQTAVHEIGHLLGLEH 172
>gi|303245322|ref|ZP_07331606.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
fructosovorans JJ]
gi|302493171|gb|EFL53033.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
fructosovorans JJ]
Length = 696
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYY 310
+ +A T IE++ GND+++ N A+N + G+DV DG G D +
Sbjct: 576 VVLAPLTTIENLATGDGNDLLVDNDADNSLYGGRGDDVLMTGRGDDSLDGGPGFDVVGFP 635
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y I + V +++ +++VE L FAD+ + + + R+ L T
Sbjct: 636 NIYADYTIGTDTGVLTV--SSQAGVKTIANVEALSFADRVVPATDALTRTDLGNT---NG 690
Query: 371 LIQVIG 376
L+ V+G
Sbjct: 691 LLAVVG 696
>gi|166831586|gb|ABY90111.1| matrix metalloproteinase 24 preproprotein (predicted) [Callithrix
jacchus]
Length = 564
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 70 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 122
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 123 EEVPYHEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 182
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 183 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 232
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 233 --LPQD----------------DLQGIQKIYGPPAEPL 252
>gi|13929064|ref|NP_113945.1| matrix metalloproteinase-24 [Rattus norvegicus]
gi|20138812|sp|Q99PW6|MMP24_RAT RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|12862768|dbj|BAB32589.1| membrane-type matrix metalloproteinase 5 [Rattus norvegicus]
Length = 618
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 81/225 (36%), Gaps = 75/225 (33%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 124 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 176
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 177 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 236
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF- 166
W G G L A+HE+GHALGL H ND +++M+ F
Sbjct: 237 WTLGNANHDGNDLFLVAVHELGHALGLEH-----------------SNDP--SAIMAPFY 277
Query: 167 ---------MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 278 QYMETHNFKLPQD----------------DLQGIQKIYGPPAEPL 306
>gi|37572562|dbj|BAC98496.1| lipase [Pseudomonas fluorescens]
gi|37572566|dbj|BAC98498.1| lipase [Pseudomonas fluorescens]
gi|37572568|dbj|BAC98499.1| lipase [Pseudomonas fluorescens]
Length = 617
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
SS+ G T+ H + + G GND +IG + N+VF +GND+ + G DTF +
Sbjct: 489 SSVKGSNGADTLKAHAGGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLF 547
>gi|184185552|gb|ACC68950.1| matrix metalloproteinase 24 preproprotein (predicted) [Rhinolophus
ferrumequinum]
Length = 547
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 53 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 105
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 106 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 165
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 166 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 215
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 216 --LPQD----------------DLQGIQKIYGPPAEPL 235
>gi|119596628|gb|EAW76222.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
Length = 532
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 38 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 90
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 91 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 150
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 151 WTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFK---------- 200
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 201 --LPQD----------------DLQGIQKIYGPPAEPL 220
>gi|37572570|dbj|BAC98500.1| lipase [Pseudomonas fluorescens]
Length = 605
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
SS+ G T+ H + + G GND +IG + N+VF +GND+ + G DTF +
Sbjct: 489 SSVKGSNGADTLKAHAGGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLF 547
>gi|292625366|ref|XP_694153.3| PREDICTED: stromelysin-3 [Danio rerio]
Length = 496
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 45/115 (39%), Gaps = 19/115 (16%)
Query: 54 VARWALGEWSKVVDLTFEET-SIHSDIKF------------ISSNNGYVCTPRYDSRYFM 100
V R AL WS L F E S +DI F G + + Y
Sbjct: 143 VIREALRAWSDETPLNFTEVLSGRADIMFDFYRYSHGDYLNFDGPGGILAHAFFPRTYRE 202
Query: 101 -EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDN 151
EI+FD + W G GT L A HEIGH LGL H PG+ P Y N
Sbjct: 203 GEIHFDMDESWTLGNSMGTDLLQVATHEIGHVLGLQHSKVPGAVMA--PFYTFSN 255
>gi|115495469|ref|NP_034938.3| matrix metalloproteinase-24 [Mus musculus]
gi|123236166|emb|CAM22837.1| matrix metallopeptidase 24 [Mus musculus]
gi|162317834|gb|AAI56392.1| Matrix metallopeptidase 24 [synthetic construct]
Length = 618
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 81/225 (36%), Gaps = 75/225 (33%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 124 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 176
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 177 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 236
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF- 166
W G G L A+HE+GHALGL H ND +++M+ F
Sbjct: 237 WTLGNANHDGNDLFLVAVHELGHALGLEH-----------------SNDP--SAIMAPFY 277
Query: 167 ---------MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 278 QYMETHNFKLPQD----------------DLQGIQKIYGPPAEPL 306
>gi|73992282|ref|XP_542973.2| PREDICTED: similar to Matrix metalloproteinase-24 precursor
(MMP-24) (Membrane-type matrix metalloproteinase 5)
(MT-MMP 5) (Membrane-type-5 matrix metalloproteinase)
(MT5-MMP) [Canis familiaris]
Length = 626
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 132 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 184
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 185 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 244
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 245 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 294
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 295 --LPQD----------------DLQGIQKIYGPPAEPL 314
>gi|126306649|ref|XP_001366929.1| PREDICTED: similar to Matrix metallopeptidase 23B [Monodelphis
domestica]
Length = 449
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 8/44 (18%)
Query: 101 EINFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
EI+FD ++ W R+ KG L+ H A HEIGHALGLMH
Sbjct: 182 EIHFDDSEYWIVGETRFSWKKGVWLTDLVHIAAHEIGHALGLMH 225
>gi|294789235|ref|ZP_06754474.1| extracellular metalloprotease [Simonsiella muelleri ATCC 29453]
gi|294482976|gb|EFG30664.1| extracellular metalloprotease [Simonsiella muelleri ATCC 29453]
Length = 839
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 54/229 (23%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HEI H +GL HP P E +S +VMSY F + P
Sbjct: 503 IHEILHTVGLKHP-HLEEKEPNTTPHLSDEKNSTGVTVMSYKADD-------FERVSEPH 554
Query: 185 VSDIVAVQKIYGA-PKGSLGNNIYKIEVQQKDSPFIQT-IYDSGGDDLLDLTLIGGVKNY 242
+ D+ + +YG PK +N Y + S I+D G D D + N
Sbjct: 555 IYDLAILHYLYGVNPKARAEDNTYTFHMFNPSSNDGDIYIWDGAGVDTFDASQEAKGVN- 613
Query: 243 IDLNTESW--------------------------------------SSIGGYEKNMT--- 261
+DL SW S G + N T
Sbjct: 614 VDLTPGSWIYADASNTNTRDFGLINTHGIDYDSYFSGGNKEAGTSAGSSGVFAYNYTDGV 673
Query: 262 --IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
I +T IE+++GS+ ND++ GN+A+N+ + GND G++G DT
Sbjct: 674 SFIGYNTQIENLLGSAHNDILKGNAADNIIQGNDGNDQIYGNAGNDTLI 722
>gi|163742687|ref|ZP_02150072.1| hypothetical protein RG210_15120 [Phaeobacter gallaeciensis 2.10]
gi|161383942|gb|EDQ08326.1| hypothetical protein RG210_15120 [Phaeobacter gallaeciensis 2.10]
Length = 422
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND +IG + N+ + GND+ G G DTF + + +I FE +
Sbjct: 315 DTIRGGAGNDTLIGGNGNDKLYGQQGNDLLIGGDGADTFAFGSNHGRARIRDFEVGV--- 371
Query: 329 DANEHKQDFLSDVERL 344
K D +S E L
Sbjct: 372 ----DKIDIISGAESL 383
>gi|259415257|ref|ZP_05739179.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
gi|259349167|gb|EEW60921.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
Length = 1043
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+++S GDD +L+GG + + TE ++ G E N T+ + + G SGND +
Sbjct: 447 TLHNSAGDD----SLVGGEGDDSIVATEGNDTLEGGEGNDTLYAGVDDDHLDGGSGNDSM 502
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF 307
G + ++V + SG D +G SG DT
Sbjct: 503 FGEAGHDVMYGRSGADHMEGGSGNDTI 529
>gi|186659959|gb|ACC85900.1| hypothetical protein 1 [Beta vulgaris subsp. vulgaris]
Length = 123
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 126 HEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSFLTSVMSYF 166
HEIGH LGL HPG YN G P Y D Y D+ S+MSY+
Sbjct: 79 HEIGHTLGLAHPGDYNAGNGNPTYN-DATYGQDTRGYSLMSYW 120
>gi|301761496|ref|XP_002916173.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-21-like
[Ailuropoda melanoleuca]
Length = 469
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 64/170 (37%), Gaps = 50/170 (29%)
Query: 52 QEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
+ + R A WS+V L F E DIK ++ PR F + A
Sbjct: 95 RHILRLAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRV----FDGSGQEFA 150
Query: 108 DVWRYG--------------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
WR G G L A+HEIGH LGL H +Y G
Sbjct: 151 HAWRLGDIHFDDDEHFTPPTSDAGISLLKVAVHEIGHVLGLPH--TYRTG---------- 198
Query: 154 ENDSFLTSVMSY-FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+M ++PQ+ M + + SD A+QK+YG+ +GS
Sbjct: 199 -------SIMQPNYIPQEPMFELDW--------SDRKAIQKLYGSCEGSF 233
>gi|300863503|ref|ZP_07108456.1| hypothetical protein OSCI_20002 [Oscillatoria sp. PCC 6506]
gi|300338492|emb|CBN53598.1| hypothetical protein OSCI_20002 [Oscillatoria sp. PCC 6506]
Length = 1451
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK------IYRFENAII 326
G SG D+ G S ++F+ SG D+F G +G DTF A + ++ F +
Sbjct: 770 GGSGADIFNGGSGADLFYGGSGADIFSGGAGNDTFNGGAGDDTFTGGDGADVFVFGTTVG 829
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + N+ DF+S ++L+ SV+ S +
Sbjct: 830 LNEGNDIISDFVSSTDKLQITSSGTVSVSFTGSSAV 865
>gi|33865415|ref|NP_896974.1| hypothetical protein SYNW0881 [Synechococcus sp. WH 8102]
gi|33632584|emb|CAE07396.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 1159
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
R+G + A HE+GHALGL HP + G VD + + +VMSY QD
Sbjct: 929 RFGGSREAGWKSVAFHELGHALGLEHPHDSSDG----DVDRIIDTNG---TVMSYEKTQD 981
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S D F D+ A+Q +YG G L
Sbjct: 982 SDGDPGFTDL------DVNALQFVYGTETGVL 1007
>gi|119384856|ref|YP_915912.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119374623|gb|ABL70216.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 946
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 221 TIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T+Y GGDD L + L GG N + L S+ G N T+ +++ G
Sbjct: 409 TLYGEGGDDTLAGYAGNDRLYGGAGNDLLLGGAGHDSLVGGAGNDTLRGEAGNDTLAGGD 468
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GND++ G + N+ +G D G G DT YA
Sbjct: 469 GNDLLFGGTGNDSLTGGAGADTLYGDGGNDTLAGYA 504
>gi|296199747|ref|XP_002747296.1| PREDICTED: matrix metalloproteinase-24 [Callithrix jacchus]
Length = 595
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 101 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 153
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 154 EEVPYHEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 213
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 214 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 263
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 264 --LPQD----------------DLQGIQKIYGPPAEPL 283
>gi|15606363|ref|NP_213742.1| hemolysin [Aquifex aeolicus VF5]
gi|2983562|gb|AAC07135.1| hemolysin [Aquifex aeolicus VF5]
Length = 398
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N TIA +++ G +GND + G + N++ G D G +G D F A
Sbjct: 156 TITGGAGNNTIAGGAGNDTIAGGAGNDTLTGGAGNDIITGGKGQDTLTGGNGADVFGLDA 215
Query: 312 P-SYLYKIYRFE 322
P + + KI F+
Sbjct: 216 PFAAIDKITDFD 227
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 222 IYDSG-GDDLLDLTLIGGVKNYIDL------NTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I D G G D + + GG Y N E + G + ++ T +VGS
Sbjct: 92 IIDGGDGTDTIKVDTTGGAVTYAPASDNNLKNVEKIVATGSNGATINLSNQTEGFEIVGS 151
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+GND + G + NN +GND G +G DT
Sbjct: 152 AGNDTITGGAGNNTIAGGAGNDTIAGGAGNDTL 184
>gi|291409995|ref|XP_002721290.1| PREDICTED: matrix metalloproteinase 21 [Oryctolagus cuniculus]
Length = 574
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 64/170 (37%), Gaps = 50/170 (29%)
Query: 52 QEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
+ + R A WS+V L F E + DIK ++ PR F + A
Sbjct: 200 KSIFRLAFRMWSEVTPLDFREDRTAPAATVDIKLGFGRGRHLGCPRV----FDGSGQEFA 255
Query: 108 DVWRYG--------------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
WR G +G L A+HEIGH LGL H +Y G
Sbjct: 256 HAWRLGDIHFDDDEHFTPPTSDRGISLLKVAVHEIGHVLGLPH--TYRPG---------- 303
Query: 154 ENDSFLTSVMSY-FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+M + PQ+ + + SD A+QK+YG+ KGS
Sbjct: 304 -------SIMQPNYTPQEPAFELDW--------SDRKAIQKLYGSCKGSF 338
>gi|149202557|ref|ZP_01879529.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149143839|gb|EDM31873.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 576
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFF 308
N T+++ + E V+G++G D++ G+ + GNDV DG G DT
Sbjct: 163 ANTTVSELSDDELVIGTNGQDLLTGDEGQDTLLGLDGNDVLNGGEGDDLLDGGEGFDTAT 222
Query: 309 YY--APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
Y +PS ++I E + + +E D ++ +E++ FA Q +
Sbjct: 223 YNIGSPSE-FQITLTETGLRLASPSEGVDDLIN-IEQVEFAGQSV 265
>gi|256829656|ref|YP_003158384.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256578832|gb|ACU89968.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 4800
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ +D N + W I Y N + IE+V+GSS +D +IG+ NV G D
Sbjct: 4388 TETILDRNGDEWKII--YTGNHAAGDVLIGIENVIGSSYDDTLIGDGNANVLSGLGGADS 4445
Query: 298 FDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFLSDVERL 344
DG G+DT Y A + R+ Y + + D L+ +E +
Sbjct: 4446 IDGGGGIDTADYSASGAAVTMDLRYG----TYKGGDAEGDSLTGIENV 4489
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
IE+V+GSS +D +IG+S NV G D DG G+DT Y A +
Sbjct: 3554 IENVIGSSYDDTLIGDSNANVLSGLGGADSIDGGGGIDTVDYSAST 3599
>gi|237801157|ref|ZP_04589618.1| calcium binding hemolysin protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024014|gb|EGI04071.1| calcium binding hemolysin protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 2983
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS--YLYKIYRFENAIIVY-- 328
G GND ++G + N++ +G+DV DG SG DT S Y+++ ++ I+ Y
Sbjct: 463 GEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGSDTYIFRKGSGQDTILNYAY 522
Query: 329 -DANEHKQDFL 338
DA ++K D +
Sbjct: 523 SDATQNKLDVV 533
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+K + +T++ S+ GYE + I +S+ GS GND + G + ++ +GND
Sbjct: 2204 IKTEVLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTL 2263
Query: 299 DGSSGLDTF 307
G SG DT
Sbjct: 2264 IGGSGADTL 2272
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD--TFFYYAP 312
G + N T++ I+++ G GND ++G++ N+ + +G+D+ DG +G D T +
Sbjct: 2802 GADGNDTLSGGDGIDALYGDVGNDHLLGDAGNDTLYGGAGDDLLDGGAGNDALTGSEGSD 2861
Query: 313 SYLYKIYRFENAIIVYDA 330
+Y + + ++++ YDA
Sbjct: 2862 TYAFGVGGGKDSVNNYDA 2879
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 262 IAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS--YLYK 317
+A T ++ ++ G+ NDV+ G + N+ ++G+DV DG +G D A YL+
Sbjct: 1516 LAGQTSVDPLNLAGTGENDVLAGGAGNDTLSGAAGDDVLDGRTGNDRLDGGAGDDIYLFG 1575
Query: 318 IYRFENAIIVYDANEHKQDFL-------SDVERLRFADQCI-------DSVNVKQRSILE 363
++ I Y+ K D + SD+ +R A+ + DS+ + I E
Sbjct: 1576 KGAGQDTISSYEGRVGKLDTVRLTSLNASDISLVRDANDLVINVNGTADSLRISNHFIGE 1635
Query: 364 YTASYE-DLIQ 373
T+ Y+ D IQ
Sbjct: 1636 ATSGYQIDRIQ 1646
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 20/115 (17%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + GN N+V +GNDV +G +G DT+ + S + N
Sbjct: 2647 GGAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYLFGKGSGQDTV------------NN 2694
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHF 386
+ + + L+ D V V + + + LIQVIG D HF
Sbjct: 2695 GGEVRIGKTDTLKLTDLNTADVQVTRE-------NNDLLIQVIGSSDSLRVASHF 2742
>gi|66968578|ref|YP_245455.1| HlyJ haemolysin-like protein [Pseudomonas aeruginosa]
gi|66862660|emb|CAI46960.1| HlyJ haemolysin-like protein [Pseudomonas aeruginosa]
Length = 3064
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+VG++GND+++G + N+ ++GND G SG DT+ Y A
Sbjct: 2587 LVGTAGNDILLGGAGNDTLNGAAGNDTLIGGSGDDTYVYTA 2627
>gi|149376781|ref|ZP_01894538.1| putative metallo-beta-lactamase family protein [Marinobacter
algicola DG893]
gi|149358902|gb|EDM47369.1| putative metallo-beta-lactamase family protein [Marinobacter
algicola DG893]
Length = 465
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 431 VKEGRNPDAFKALEYIASHEDLINAF-----ADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
V +GR+P +F+ L I SHED +NA + P +V G C GR V +
Sbjct: 303 VSQGRHPLSFEQLTLIDSHEDHLNAVDYLTKSHRPCVVLAGSGM-----CAGGRVVNYLK 357
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+ +D+ V +G R +THG + G
Sbjct: 358 AMLASERNDVLFVGYQAKGTPGRDILTHGPRGG 390
>gi|119493472|ref|ZP_01624141.1| hypothetical protein L8106_08646 [Lyngbya sp. PCC 8106]
gi|119452716|gb|EAW33895.1| hypothetical protein L8106_08646 [Lyngbya sp. PCC 8106]
Length = 944
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+++++GS+ +DV+ GN+ANN +GND G G DTF Y P+
Sbjct: 806 VDNLMGSNFDDVLTGNAANNRIEGGNGNDELTGKGGGDTFVYQQPA 851
>gi|298370417|ref|ZP_06981733.1| type I secretion target repeat protein [Neisseria sp. oral taxon
014 str. F0314]
gi|298281877|gb|EFI23366.1| type I secretion target repeat protein [Neisseria sp. oral taxon
014 str. F0314]
Length = 494
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 134/356 (37%), Gaps = 71/356 (19%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
+ +LN A EV LG K + T E I +D + + N + R F E
Sbjct: 1 MVKLNEKA-EVQLKRLGFHEKRFNSTMSELDRIKADDELVGQINKFSSQ----GRGFFET 55
Query: 103 NFDKADVWR--------YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV-------- 146
KA + +G+G + + HE+GHALG S + YP
Sbjct: 56 KDGKASAYHDPNDRNIYFGLGSQYVTARILAHEVGHALGRNQAKSADY-YPTAKSYAQAR 114
Query: 147 -YGVDNDYENDSFL-------------TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
YG N++ + T + PQ + S+ V D++A +
Sbjct: 115 GYGEAEAIYNEARMVAYEEQRNGRAYSTHISGGLYPQ--VKGKSY-----EQVKDLLARE 167
Query: 193 KIYG---APKGSLGNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+YG + GS+ + Y+ ++ + + F + ++G L ++G VK+ + +
Sbjct: 168 NMYGMYPSTNGSVRLSYYENDILFFMHRRTAFEKDFAEAG---LRQSDMVGFVKHMANYD 224
Query: 247 TESWSSIGGYEKNMTIAQHTVIE-----------SVVGSSGNDVVIGNSANNVFFESSGN 295
T S N + ++++ S+ G +GNDV+ G +N+ SGN
Sbjct: 225 TFGDSRGNNVNANGAFDRQSLLQGKPTTRLNGGASMYGDAGNDVMTGTKSNDRMLGGSGN 284
Query: 296 DVFDGSSGLDTFFYYAPS------YLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
D G G D A Y YR + + D + + FL D RLR
Sbjct: 285 DTLKGGDGNDLLAGNAGKDRLYGGRGYDTYRADRYDTIRDEDGKGEVFL-DGRRLR 339
>gi|297824541|ref|XP_002880153.1| matrix metalloproteinase [Arabidopsis lyrata subsp. lyrata]
gi|297325992|gb|EFH56412.1| matrix metalloproteinase [Arabidopsis lyrata subsp. lyrata]
Length = 336
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 55/212 (25%)
Query: 29 RYKPDVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEETS--IHSDIK- 80
R+ DV +F L P + + V R A G+W+ V+ +TF ET + +DIK
Sbjct: 126 RWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVTFIETEDYVIADIKI 185
Query: 81 -FISSNNG-------------YVCTPRYDSRYFMEINFDKADVWR--YGIGKGTI---LS 121
F + ++G + +P ++ DKA+ W + K T+ L
Sbjct: 186 GFFNGDHGDGEPFDGVLGVLAHTFSPENG-----RLHLDKAETWAVDFNEEKSTVAVDLE 240
Query: 122 HNALHEIGHALGLMHPGSYNGG-YP---------------------VYGVDNDYENDSFL 159
A+HEIGH LGL H + YP +YG + ++ S L
Sbjct: 241 SVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNPNFTLSSLL 300
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
S S + D M S G + +S ++A+
Sbjct: 301 ASETSTNLADDGSMRRSQGMIYS-TLSTVIAL 331
>gi|281354520|gb|EFB30104.1| hypothetical protein PANDA_004219 [Ailuropoda melanoleuca]
Length = 404
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 64/170 (37%), Gaps = 50/170 (29%)
Query: 52 QEVARWALGEWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
+ + R A WS+V L F E DIK ++ PR F + A
Sbjct: 30 RHILRLAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRV----FDGSGQEFA 85
Query: 108 DVWRYG--------------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
WR G G L A+HEIGH LGL H +Y G
Sbjct: 86 HAWRLGDIHFDDDEHFTPPTSDAGISLLKVAVHEIGHVLGLPH--TYRTG---------- 133
Query: 154 ENDSFLTSVMSY-FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+M ++PQ+ M + + SD A+QK+YG+ +GS
Sbjct: 134 -------SIMQPNYIPQEPMFELDW--------SDRKAIQKLYGSCEGSF 168
>gi|260808835|ref|XP_002599212.1| hypothetical protein BRAFLDRAFT_199955 [Branchiostoma floridae]
gi|229284489|gb|EEN55224.1| hypothetical protein BRAFLDRAFT_199955 [Branchiostoma floridae]
Length = 158
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 21/119 (17%)
Query: 39 RLSFDITELNPNAQE-----VARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR 93
+L++ I P+ E R L WS V L FE+TS +SDI+ G+
Sbjct: 6 KLTYRIKNYTPDLPEEEVDDAVRRGLQVWSNVTPLVFEKTSAYSDIEMSFEKYGHGDEDP 65
Query: 94 YDSR-------YFM------EINFDKADVWRYGIGKGTILSH---NALHEIGHALGLMH 136
D +F +++FD ++ W +G + ++ A HE+GH+LGL H
Sbjct: 66 LDGPGGTLAHAFFPGPGIGGDVHFDDSETWTVRSFRGGLRTNLFIVAAHELGHSLGLDH 124
>gi|170744302|ref|YP_001772957.1| glycosyl transferase family protein [Methylobacterium sp. 4-46]
gi|168198576|gb|ACA20523.1| glycosyl transferase family 2 [Methylobacterium sp. 4-46]
Length = 987
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 39/236 (16%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASH---EDL 452
+ FD Y Y D+ V G+D A HY++ G KEGR+P +F L Y H
Sbjct: 15 VHFDERFYRLRYPDV-GVAGADPFA---HYMSFGWKEGRDPSPSFPTLLYKDKHLGPTPR 70
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL--RNVFGSDRGA-AARH 509
N A + + F EE V + + +D+ R+ D GA A H
Sbjct: 71 TNPLAHYAARPEAERQRAVAFSAEEA--VAIQARVVRDHFDEAFYRDAARLDAGADALTH 128
Query: 510 YITHGVKEGRNP-DAFKALEYIASHEDLIN-------------AFADAPDLVQA------ 549
Y+T G +EG P F + + H + D P+ ++A
Sbjct: 129 YLTVGWREGYEPAPGFSSAAHAGKHRHIAATGLCPFYHFVSTYGLLDHPEPLEAALACGA 188
Query: 550 --GKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
G+ S + F+ YLT Y D+ G D +HY+ G KEGR
Sbjct: 189 SGGRARVSRPVVLSTIAQEFDRASYLTRYADVRQS-GID---PVEHYVDFGWKEGR 240
>gi|88800552|ref|ZP_01116114.1| Glycosyl transferase, family 2 [Reinekea sp. MED297]
gi|88776697|gb|EAR07910.1| Glycosyl transferase, family 2 [Reinekea sp. MED297]
Length = 493
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 379 VFESMKHFY-EFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
VF S Y LSE ++ FD YL +Y D++ G D AA HY+ HG K
Sbjct: 386 VFRSAIRLYPRVRLSEQVELLKASDLFDETWYLKTYPDVQKA-GLD---AAIHYLRHGAK 441
Query: 433 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
EGRNP F Y+ + D+ + +A LV H+ +G +E R V+
Sbjct: 442 EGRNPGPNFDTQWYLQQYPDVQKSKLNA--LV-----HYILYGIDENRKVS 485
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL +Y D++ G D AA HY+ HG KEGRNP F Y+ + D+ +
Sbjct: 412 FDETWYLKTYPDVQKA-GLD---AAIHYLRHGAKEGRNPGPNFDTQWYLQQYPDVQKSKL 467
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
+A LV H+ +G +E R ++
Sbjct: 468 NA--LV-----HYILYGIDENRKVS 485
>gi|301762074|ref|XP_002916480.1| PREDICTED: matrix metalloproteinase-24-like [Ailuropoda
melanoleuca]
Length = 630
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 136 RRSKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 188
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 189 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 248
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 249 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 298
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 299 --LPQD----------------DLQGIQKIYGPPAEPL 318
>gi|104781322|ref|YP_607820.1| triacylglycerol lipase [Pseudomonas entomophila L48]
gi|95110309|emb|CAK15016.1| Triacylglycerol lipase [Pseudomonas entomophila L48]
Length = 616
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G+ N LN + +SI G + + + + G G+D + G + N+V +GNDV
Sbjct: 476 GLLNSGKLNPYA-ASISGSQAGDQLVAGNQGQWLFGLGGDDRLQGGAGNDVLVGGTGNDV 534
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRF-----------ENAIIVYDANEHKQDFLSDVERLRF 346
G +G DTF + L ++ F E D +H SD+ L+F
Sbjct: 535 LSGGAGRDTFLFSGHFGLDRVLDFTGQDRLVFMGVEGGTAAPDWRDHASQVGSDLV-LKF 593
Query: 347 ADQCIDSVNVKQRSI 361
+ V + +S+
Sbjct: 594 GADSVTLVGIAAQSL 608
>gi|91790750|ref|YP_551701.1| hemolysin-type calcium-binding region [Polaromonas sp. JS666]
gi|91700630|gb|ABE46803.1| Hemolysin-type calcium-binding region [Polaromonas sp. JS666]
Length = 2097
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+++GS+ ND + GN++ N +GND +G +G DT A Y I + +++
Sbjct: 1568 IENLIGSAYNDTLTGNTSANRIEGGAGNDSLNGGTGADTLLGGAGDDQYTIDNLGD-VVI 1626
Query: 328 YDANEHKQDFLSDVERLRFADQ 349
DA+ +S V+ + +Q
Sbjct: 1627 EDASAGTDTIVSSVDYVLGVNQ 1648
>gi|169731509|gb|ACA64881.1| matrix metalloproteinase 24 preproprotein (predicted) [Callicebus
moloch]
Length = 595
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 101 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 153
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 154 EEVPYHEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 213
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 214 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 263
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 264 --LPQD----------------DLQGIQKIYGPPAEPL 283
>gi|114763222|ref|ZP_01442646.1| RTX toxins and related Ca2+-binding protein [Pelagibaca bermudensis
HTCC2601]
gi|114544020|gb|EAU47030.1| RTX toxins and related Ca2+-binding protein [Roseovarius sp.
HTCC2601]
Length = 175
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 222 IYDSGGDDLLDLT-----LIGGVKNYIDLNTESWS--SIGGYEKNMTIAQHTVIESVVGS 274
I +GGDD ++ + GGV N D W ++ G E N T+A +++ G
Sbjct: 20 INGAGGDDFINGAGGDDYIKGGVGN--DRLKGGWGDDAMAGGEGNDTLAGGAGNDTLGGG 77
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
G+DV+ G + ++V + G+D+ G+ G DTF F + K+ F+ A
Sbjct: 78 EGDDVLNGGTGDDVLYGGPGDDIMVGADGADTFAFTTVSTGTTKVVDFDMA 128
>gi|29126959|gb|AAH47614.1| MMP24 protein [Homo sapiens]
Length = 626
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 132 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 184
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 185 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 244
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 245 WTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFK---------- 294
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 295 --LPQD----------------DLQGIQKIYGPPAEPL 314
>gi|148264595|ref|YP_001231301.1| putative outer membrane adhesin like protein [Geobacter
uraniireducens Rf4]
gi|146398095|gb|ABQ26728.1| putative outer membrane adhesin like protein [Geobacter
uraniireducens Rf4]
Length = 3598
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 21/151 (13%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+++ + T+ +I GY ++ I+ + + SGNDV+ G N+ G+D+
Sbjct: 1067 LRDMLLTGTDGADTIIGYRQDDAISGGAGNDYIDARSGNDVISGGDGNDTISAGLGDDII 1126
Query: 299 DGSSGLDTFF----------YYAPSYLYKIYRF---ENAIIVYDANEHKQDFLSDVERLR 345
DG +G DT + Y AP Y F + +Y+ NE L + +R
Sbjct: 1127 DGGTGDDTIYGTDSHYYDVAYDAPRNDNDTYLFGWGDGHDTIYNRNES----LISSDTIR 1182
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
F D I + +V+ +L Y EDL V+G
Sbjct: 1183 FKD-GITASDVRFEGVLGYN---EDLRIVLG 1209
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 28/138 (20%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
P ++I + GDD+L +G D+N S+I G E N ++ + + G++G
Sbjct: 1523 PSAESIVGTAGDDIL----VGS-----DIN----STILGLEGNDVLSGADGDDWLEGAAG 1569
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + GN ++ + G+DV +G SG D Y + RFE V D
Sbjct: 1570 NDTLAGNMGDDNLYGGDGDDVLNGGSGRD---YIEAGNGANVIRFEQGSGV--------D 1618
Query: 337 FLSDVERLRFADQCIDSV 354
F+ R R AD D++
Sbjct: 1619 FV----RTRLADGQADTI 1632
>gi|324507836|gb|ADY43312.1| Matrix metalloproteinase-24 [Ascaris suum]
Length = 486
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
++ + + R + + YW + Y+ T H +S A++V R A W
Sbjct: 93 MRVKFRSRRTKRYAIEGSYWGVRNVTYRIGKYT-HSMS------GYEARKVMRRAFKVWE 145
Query: 64 KVVDLTFEETS---IHSDIKFISS---------NNGYVCTPRYDSRYFMEINFDKADVWR 111
+ L F+ S ++ +I F G + + R+ +++FD+ ++W
Sbjct: 146 EFSPLRFQYKSRGPVNIEIIFARRAHGDGEPFDGKGQILAHAFFPRFGGDVHFDEEELWS 205
Query: 112 --YGIGKGTILSHNALHEIGHALGLMH 136
IG G L A+HEIGH+LGL H
Sbjct: 206 PSKSIGHGIDLYAVAVHEIGHSLGLKH 232
>gi|320324247|gb|EFW80326.1| calcium binding hemolysin protein, putative [Pseudomonas syringae pv.
glycinea str. B076]
Length = 4096
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS--YLYKIYRFENAIIVY-- 328
G GND ++G + N++ +G+DV DG SG DT S Y+++ ++ I+ Y
Sbjct: 1577 GEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGSDTYIFRKGSGQDTILNYAY 1636
Query: 329 -DANEHKQDFL 338
DA ++K D +
Sbjct: 1637 SDATQNKLDVV 1647
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+K + +T++ S+ GYE + I +S+ GS GND + G + ++ +GND
Sbjct: 3318 IKTEVLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTL 3377
Query: 299 DGSSGLDTF 307
G SG DT
Sbjct: 3378 IGGSGADTL 3386
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAII 326
+++ G +G D++ G S N+ + +G+DV DG +G D S +Y+ R ++ I
Sbjct: 1022 DNLSGGAGADLLAGGSGNDYLYGDTGDDVLDGGAGNDALSGGEGSDIYRFSRGWGQDTIS 1081
Query: 327 VYDANEHKQD---FLSDV 341
YD + +K D F SD+
Sbjct: 1082 NYDPSTNKSDAIEFASDI 1099
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 20/117 (17%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G +GND + GN N+V +GNDV +G +G DT+ + S +
Sbjct: 3758 LLGGAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYLFGKGSGQDTV------------ 3805
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHF 386
N + + + L+ D V V + + + LIQVIG D HF
Sbjct: 3806 NNGGEVRIGKTDTLKLTDLNAADVQVTRE-------NNDLLIQVIGSSDSLRVASHF 3855
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD--TFFYYAP 312
G + N T++ I+++ G GND ++G++ N+ + +G+D+ DG +G D T +
Sbjct: 3915 GADGNDTLSGGDGIDALYGDVGNDHLLGDAGNDTLYGGAGDDLLDGGAGNDALTGSEGSD 3974
Query: 313 SYLYKIYRFENAIIVYDA 330
+Y + + ++++ YDA
Sbjct: 3975 TYAFGVGGGKDSVNNYDA 3992
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 262 IAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS--YLYK 317
+A T ++ ++ G+ NDV+ G + N+ ++G+DV DG +G D A YL+
Sbjct: 2630 LAGQTSVDPLNLAGTGENDVLAGGAGNDTLSGAAGDDVLDGRTGNDRLDGGAGDDIYLFG 2689
Query: 318 IYRFENAIIVYDANEHKQDFL-------SDVERLRFADQCI-------DSVNVKQRSILE 363
++ I Y+ K D + SD+ +R A+ + DS+ + I E
Sbjct: 2690 KGAGQDTISSYEGRVGKLDTVRLTALNASDISLVRDANDLVINVNGTADSLRISNHFIGE 2749
Query: 364 YTASYE-DLIQ 373
T+ Y+ D IQ
Sbjct: 2750 ATSGYQIDRIQ 2760
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+K+ L+T+ SI GY + T++ +S+ G +GNDV+ G++ N++ + + G D
Sbjct: 756 IKSQAVLSTDGNDSIRGYATDDTLSGGLGDDSLYGQAGNDVLKGDAGNDILYGAEGADSL 815
Query: 299 DGSSGLDTFFYYAPSYL 315
G G D A + L
Sbjct: 816 SGGDGQDNLSGGAGADL 832
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV---------- 288
VK+ L+T+ SI GY + T+ + + G +GNDV+ G++ N++
Sbjct: 374 VKSLAVLSTDGNDSIRGYASDDTLNGGLGDDVLYGLAGNDVLKGDAGNDILYGAAGADSL 433
Query: 289 --------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIVYDANEHKQD-- 336
F +G+DV +G +G DT S Y+ R ++ I YD + K D
Sbjct: 434 SGGSGNDYLFGDAGDDVLNGGAGNDTLSGGEGSDTYRFSRGWGQDTISNYDPSTDKSDAI 493
Query: 337 -FLSDV 341
F SD+
Sbjct: 494 EFASDI 499
>gi|297481953|ref|XP_002692352.1| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
taurus]
gi|296481308|gb|DAA23423.1| matrix metallopeptidase 24 (membrane-inserted) [Bos taurus]
Length = 596
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 102 RRHKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 154
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 155 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 214
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 215 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 264
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 265 --LPQD----------------DLQGIQKIYGPPAEPL 284
>gi|5729929|ref|NP_006681.1| matrix metalloproteinase-24 preproprotein [Homo sapiens]
gi|332858203|ref|XP_003316927.1| PREDICTED: matrix metalloproteinase-24 [Pan troglodytes]
gi|12585280|sp|Q9Y5R2|MMP24_HUMAN RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|5381386|gb|AAD42962.1|AF131284_1 membrane type 5 matrix metalloproteinase [Homo sapiens]
gi|5689367|dbj|BAA82967.1| membrane-type-5 matrix metalloproteinase [Homo sapiens]
gi|220675561|emb|CAX12722.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
gi|225000844|gb|AAI72450.1| Matrix metallopeptidase 24 (membrane-inserted) [synthetic
construct]
Length = 645
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 151 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 203
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 204 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 263
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 264 WTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFK---------- 313
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 314 --LPQD----------------DLQGIQKIYGPPAEPL 333
>gi|3183022|sp|P91953|HE_HEMPU RecName: Full=50 kDa hatching enzyme; Short=HE; Short=HEZ; AltName:
Full=Envelysin; AltName: Full=Sea-urchin-hatching
proteinase; Contains: RecName: Full=38 kDa hatching
enzyme; Contains: RecName: Full=32 kDa hatching enzyme
non-specific; Contains: RecName: Full=15 kDa peptide;
Flags: Precursor
gi|1816431|dbj|BAA19171.1| hatching enzyme [Hemicentrotus pulcherrimus]
Length = 591
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 22/98 (22%)
Query: 56 RWALGEWSKVVDLTFEE----TSIHSDIKFISSNNG-------------YVCTPRYDSRY 98
R A W V LTF E +S+ IKF S +G + PR
Sbjct: 204 RRAFQVWDDVSSLTFREVVDSSSVDIRIKFGSYEHGDGISFDGQGGVLAHAFLPRNG--- 260
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ +FD ++ W G GT L A HE GH+LGL H
Sbjct: 261 --DAHFDDSERWTIGTNSGTNLFQVAAHEFGHSLGLYH 296
>gi|67926068|ref|ZP_00519320.1| Peptidase M10A and M12B, matrixin and adamalysin [Crocosphaera
watsonii WH 8501]
gi|67852088|gb|EAM47595.1| Peptidase M10A and M12B, matrixin and adamalysin [Crocosphaera
watsonii WH 8501]
Length = 284
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 40/177 (22%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEET-----SIHSDIKFISSNN---GYVCTPRYDSRY 98
+ N +++ W V+D+ F E S I+ +SNN Y P + SR
Sbjct: 109 IKSNFRKIVAW----LENVIDIDFVEVDETDPSTFGQIRVQNSNNPGYAYAYYPGFTSRS 164
Query: 99 FMEINFDKADVWRYGIGKGTILSHNA--------LHEIGHALGLMHPGSYNGGYPVYGVD 150
+I+F K R G G H+A +HE+GHALGL H +++G G+D
Sbjct: 165 -GDIHF-KTGYDRLGDTNG--FQHDAGKHGYMTIVHELGHALGLAH--TFSGTVLDPGLD 218
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
N SVM+Y S T M D+ A+Q +YGA + GN Y
Sbjct: 219 NTDN------SVMTYNFTGHS--------AGTFMALDVAALQSLYGAKTHNNGNTTY 261
>gi|312891818|ref|ZP_07751325.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
gi|311295760|gb|EFQ72922.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
Length = 824
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND--YENDSFLTSVMSYF------MP 168
G++L + HE+GH LGL H + + YPV + N + + F SVM Y P
Sbjct: 433 GSLLKNVITHEVGHTLGLRHDFAGSASYPVDSIRNKKFVQKNGFGPSVMDYMRFNYAAQP 492
Query: 169 QDSM 172
QD M
Sbjct: 493 QDQM 496
>gi|268679624|ref|YP_003304055.1| hypothetical protein Sdel_0991 [Sulfurospirillum deleyianum DSM
6946]
gi|268617655|gb|ACZ12020.1| hypothetical protein Sdel_0991 [Sulfurospirillum deleyianum DSM
6946]
Length = 679
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 62/153 (40%), Gaps = 34/153 (22%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-----KGSLGNNIYKIEVQQKDSPFIQ 220
+ DS DA +G + +K+YG GSLGN+
Sbjct: 179 ILRGDSKTDAIYGGGGKDDIYGGSLAEKLYGGEGDDFIDGSLGND--------------- 223
Query: 221 TIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI + G+D LD TL+GG + ++ G E N T+ + +++++G S
Sbjct: 224 TIEGAEGNDTLDGGDGTDTLLGGTGDDNLFGDAGDDTLNGGEDNDTLNGGSGLDTLLGES 283
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
GND +IG GND DG G DT
Sbjct: 284 GNDTLIG---------GGGNDTLDGGEGSDTLM 307
>gi|164664904|gb|ABY65885.1| matrix metalloproteinase 23 [Sus scrofa]
Length = 265
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 103 IHFDDSEYWVLGPTRYSWKKGVWLTDPVHVAAHEIGHALGLMH 145
>gi|46241610|gb|AAS82995.1| putative calcium-binding protein-like protein [Azospirillum
brasilense]
Length = 953
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ +++ G +GND++IGN N+ G+D DG +G D F +
Sbjct: 169 DGNDTLTSDDAADNINGGAGNDILIGNGGNDTLIGGVGHDTMDGGAGADVF---DGGDGF 225
Query: 317 KIYRFENA 324
+ +ENA
Sbjct: 226 DVVTYENA 233
>gi|327271606|ref|XP_003220578.1| PREDICTED: matrix metalloproteinase-24-like [Anolis carolinensis]
Length = 604
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W +V LTF
Sbjct: 110 RRSKRYALTGQKWRQKHITY-----SVHNYTPKVGELD--TRKAIRQAFDVWQRVTPLTF 162
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 163 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 222
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 223 WTLGNSNHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 272
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 273 --LPQD----------------DLQGIQKIYGPPAEPL 292
>gi|311258321|ref|XP_003127551.1| PREDICTED: matrix metalloproteinase-23-like [Sus scrofa]
Length = 393
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 182 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 224
>gi|296448690|ref|ZP_06890552.1| Hemolysin-type calcium-binding region [Methylosinus trichosporium
OB3b]
gi|296253797|gb|EFH00962.1| Hemolysin-type calcium-binding region [Methylosinus trichosporium
OB3b]
Length = 496
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 262 IAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY--APSYLYK 317
+A+ T+ IE++ G SG D +IG+ ++N+ +G DV DG +G+DT Y S
Sbjct: 295 VAEDTIRNIENIYGGSGADTLIGDGSSNLLRGGAGADVLDGGAGVDTADYSDKTSSVAVT 354
Query: 318 IYRFENAIIVY 328
+ NA ++
Sbjct: 355 LNGATNATVMV 365
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 262 IAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+A+ T+ IE++ G SG D +IG+ ++N+ +G DV DG +G+DT Y
Sbjct: 222 VAEDTIRNIENIYGGSGADTLIGDGSSNLLRGGAGADVLDGGAGVDTADY 271
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 32/102 (31%)
Query: 262 IAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------FYYA 311
+ + TV IE+V G +G D ++G+S+ N+ G+DV G+ G D F +A
Sbjct: 368 VVEDTVRNIENVTGGAGADTLVGDSSANLLSGGGGDDVLTGAGGADRLTGGSGSDTFVFA 427
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQC 350
P++ QD ++D +RLR D
Sbjct: 428 PAF-------------------GQDIITDFSSTDRLRIDDTI 450
>gi|329848424|ref|ZP_08263452.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843487|gb|EGF93056.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1128
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 117/328 (35%), Gaps = 89/328 (27%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
N Q A +A S +LTF + + ++ I + D E NF +
Sbjct: 197 NAAQQSAALYAFALISSYTNLTFTQVTESAETHGIIR----MSQTTADGAGSAEGNFPGS 252
Query: 108 D-----VWRYGIGKGTILS--------HNALHEIGHALGLMHP-GSYN------GGY--- 144
D +W G+ L+ +HEIGH +GL H SY GGY
Sbjct: 253 DASDGDIWFGQTGQPFYLTPQIGNWGMATMIHEIGHTMGLKHGHDSYTTFDLTVGGYLDG 312
Query: 145 --PVYGVDN-DYENDSFLTSVMSYFMPQD---SMMDASFGYCATPMVSDIVAVQKIYGAP 198
P +G + D + SVM+Y S F T M +DI A+Q +YGA
Sbjct: 313 PGPHFGTAALPADKDGWAWSVMTYRSAPGFTASFQGEQFNQPQTYMQADIAALQFMYGAN 372
Query: 199 KGS--------------------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
S +G + + + +TI+D G D D +
Sbjct: 373 FNSNATDSVYTFNATTGEMFINGVGQGVPEFDAVAGVGKIFRTIWDGNGTDTYDFS---- 428
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQ----------------------------HTVIES 270
N+ + T + S GG+ ++AQ ++IE+
Sbjct: 429 --NFTNNQTVNLSP-GGFST-FSLAQLGDSRPLLAGFTAQPGNIGNALQYQGDARSLIEN 484
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ SGND++IGN A N GND +
Sbjct: 485 AITGSGNDLLIGNQATNTLTGGLGNDTY 512
>gi|313231998|emb|CBY09110.1| unnamed protein product [Oikopleura dioica]
Length = 497
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 46/198 (23%)
Query: 29 RYKPDVLTTHRLSFDITELNP------NAQEVARWALGEWSKVVDLTFEE---------- 72
RY + TH+L+F + P + R ALG W+ LTFEE
Sbjct: 117 RYIQNKWDTHKLTFHVQN-KPYSLSDLQVKRAFRKALGIWATASGLTFEERKRKKKRYKR 175
Query: 73 TSIHSDIKFISSNNGYVCTPRYDS-------RYFM---EINFDKADVWRYGIGKG-TILS 121
+++ +I F N+ + +D +F + +FD ++ W KG L
Sbjct: 176 SNVDLNIGFRERNHECGRSRAFDGPGGELAHAFFPTAGQAHFDMSEKWSTRERKGFNNLV 235
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE+GH LGL H S +G + N + ND L+ + + + ++
Sbjct: 236 AVATHEVGHMLGLGH-SSIDG-----SIMNAWYNDPKLSKAPRF----RNFIKLNW---- 281
Query: 182 TPMVSDIVAVQKIYGAPK 199
DI A+Q +YGAPK
Sbjct: 282 ----DDIQAIQDLYGAPK 295
>gi|207739511|ref|YP_002257904.1| hemagglutinin/hemolysin-related protein [Ralstonia solanacearum
IPO1609]
gi|206592890|emb|CAQ59796.1| hemagglutinin/hemolysin-related protein [Ralstonia solanacearum
IPO1609]
Length = 3347
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK----------NYIDLNTESWSSIGGYEKNM 260
+Q DS + + ++G LL+++L+G + N T I GY +
Sbjct: 3123 IQATDSTSLSSTANAG--QLLNVSLLGSTQPSAIIEGTSGNDTLTGTSGNDRIYGYAGDD 3180
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
T++ + + G +GNDV+ G + N++ +GND G +G D F +
Sbjct: 3181 TLSGGDGNDLLRGGAGNDVLNGGNGNDILIGGAGNDTLTGGAGGDIFLW 3229
>gi|260787547|ref|XP_002588814.1| hypothetical protein BRAFLDRAFT_89755 [Branchiostoma floridae]
gi|229273984|gb|EEN44825.1| hypothetical protein BRAFLDRAFT_89755 [Branchiostoma floridae]
Length = 2357
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 26/187 (13%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDI--KFISSNNGYVCTPRYDSR-------YFM-- 100
+ +AR A W+ V LTF DI +F +G C +D YF
Sbjct: 143 ETIAR-AFQVWADVTPLTFRPVPKKPDIDIEFARGKHGN-CRLHFDGSGNTLAHAYFPGE 200
Query: 101 ----EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYEN 155
+++FD A+ W +GT L A+HE+GH+LGL H + +P Y
Sbjct: 201 GLLGDVHFDAAERWTIQSPQGTNLFIVAVHELGHSLGLDHADHRDAVMFPWY-------- 252
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+L S Y +P + Y TP V V Y A + + + + ++
Sbjct: 253 PGYLGSSYLYQLPAVDVTAIQALYGVTPSQGAKVKVSWGYLAYRQTHHSPAQMDSIPRQS 312
Query: 216 SPFIQTI 222
P I+T+
Sbjct: 313 DPVIRTL 319
>gi|209522963|ref|ZP_03271520.1| outer membrane adhesin like proteiin [Arthrospira maxima CS-328]
gi|209496550|gb|EDZ96848.1| outer membrane adhesin like proteiin [Arthrospira maxima CS-328]
Length = 2722
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+Y +D L GG N + + + G + N TI + + G GND++
Sbjct: 308 TLYGGADNDFL----FGGTGNDLLFGDDGNDELVGGKGNDTIFGGPGDDIIFGGDGNDIL 363
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF 307
G N+ F GND+ +G G+DT
Sbjct: 364 RGGKGNDRLFGDEGNDLLEGGRGVDTL 390
>gi|209525312|ref|ZP_03273854.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209494327|gb|EDZ94640.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 539
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL+GG N + + S+ G + T+ ++++GS G+D+++GN N++ +
Sbjct: 327 TLLGGNGNDLLFGNQGNDSLDGGPGDDTLYGGKGDDTLLGSQGDDILLGNQGNDILYGGD 386
Query: 294 GNDVFDGSSGLDTFF 308
G+D G G DT +
Sbjct: 387 GDDCLYGGQGDDTLY 401
>gi|291569831|dbj|BAI92103.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 515
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL+GG N + + S+ G + T+ ++++GS GND+++GN N++ +
Sbjct: 303 TLLGGNGNDLLFGNQGDDSLDGGPGDDTLYGGKGDDTLLGSQGNDILLGNMENDILYGGD 362
Query: 294 GNDVFDGSSGLDTFF 308
G+D G G DT +
Sbjct: 363 GDDCLYGGQGNDTLY 377
>gi|320104907|ref|YP_004180498.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC 43644]
gi|319752189|gb|ADV63949.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC 43644]
Length = 2233
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 233 LTLIGGVKNYI----DLNTESWSSIGG----YEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
L LIGG N + DLN + G + N TI + +S+VG +G+D + G +
Sbjct: 1679 LVLIGGPGNDLLRGSDLNDTIFGGAGNNNPVEDGNNTIEGNGGDDSLVGGAGDDTITGGA 1738
Query: 285 ANNVFFESSGNDVFDGSSGLDTFF 308
N++ +G D+ DG +G DT +
Sbjct: 1739 GNDLIQGGAGTDLLDGEAGNDTLW 1762
Score = 37.4 bits (85), Expect = 8.9, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ GDD+L D TL GG E + G N T+ + + G G
Sbjct: 1972 LFGESGDDVLFGRAGDDTLYGGAGQDYLFGGEGDDFLFGEAGNDTLVGGDGNDVISGGDG 2031
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLD 305
ND+ G + ++ F ++GND G G D
Sbjct: 2032 NDIAFGGAGDDTIFGNAGNDTLQGGDGND 2060
>gi|163732897|ref|ZP_02140342.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och
149]
gi|161394257|gb|EDQ18581.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och
149]
Length = 570
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+V G+ ND + GN +NV +GNDV G +G DTF ++ I I+ +
Sbjct: 458 ENVTGTDFNDTITGNDQDNVIRGGAGNDVMSGGAGADTFVFFEEDAGVDI------ILDF 511
Query: 329 DANEHKQDFLS 339
+ NE FL+
Sbjct: 512 NFNEDSLLFLT 522
>gi|291567843|dbj|BAI90115.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 884
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 28/146 (19%)
Query: 221 TIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI GGDD TL+GG N Y+D G N +S+VG G D
Sbjct: 681 TIKGLGGDD----TLMGGFGNDYLD----------GGPGN---------DSLVGGGGRDT 717
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYR--FENAIIVYDANEHKQD 336
+IG + N+ +G D+ G G D F F + S + + R + + I +D K D
Sbjct: 718 LIGGAGNDTLNGGAGQDILTGGPGADIFVFGFGESRVMQAKRRVYPDHITDFDIGTDKID 777
Query: 337 FL-SDVERLRFADQCIDSVNVKQRSI 361
L D E + + + N K R +
Sbjct: 778 LLKQDGEEMNPPRRLTRAANNKGRRL 803
>gi|218531909|ref|YP_002422725.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
gi|218524212|gb|ACK84797.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
Length = 1317
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 21/126 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL SY D+ H++ HG E RNP+A F + Y ++E + +A
Sbjct: 189 FDESYYLISYPDV----AQSEMPPLEHFLKHGGPELRNPNAHFDSRWYAETNEAACSGYA 244
Query: 458 DAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ +H+ G EGR FD+ Y+ ++ + R A RHY+T G
Sbjct: 245 -------IPLEHYIERGTLEGRDPNPNFDTAFYVDNHPEARK-------APLRHYLTVGQ 290
Query: 516 KEGRNP 521
P
Sbjct: 291 HAATKP 296
>gi|167031206|ref|YP_001666437.1| hypothetical protein PputGB1_0186 [Pseudomonas putida GB-1]
gi|166857694|gb|ABY96101.1| conserved repeat domain protein [Pseudomonas putida GB-1]
Length = 6753
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 16/81 (19%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND+++G S N+ G+D+ G SG DTF + A +
Sbjct: 6612 DTLDGGRGNDILLGGSGNDTLIGGHGDDILIGGSGADTFVWKAGDF-------------- 6657
Query: 329 DANEHKQDF-LSDVERLRFAD 348
N+ +DF LSD +++ +D
Sbjct: 6658 -GNDVIKDFKLSDKDKIDLSD 6677
>gi|6754710|ref|NP_036115.1| matrix metalloproteinase-23 precursor [Mus musculus]
gi|81861525|sp|O88676|MMP23_MOUSE RecName: Full=Matrix metalloproteinase-23; Short=MMP-23; AltName:
Full=CAMP metalloproteinase; Short=CA-MMP; Contains:
RecName: Full=Matrix metalloproteinase-23, soluble form;
Flags: Precursor
gi|3552011|gb|AAC34886.1| CAMP metalloproteinase [Mus musculus]
gi|74138835|dbj|BAE27223.1| unnamed protein product [Mus musculus]
gi|76825566|gb|AAI07358.1| Matrix metallopeptidase 23 [Mus musculus]
gi|123257296|emb|CAM16747.1| matrix metalloproteinase 23 [Mus musculus]
gi|148683074|gb|EDL15021.1| matrix metallopeptidase 23 [Mus musculus]
Length = 391
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 180 IHFDDSEYWVLGPTRYSWKKGVWLTNLVHVAAHEIGHALGLMH 222
>gi|326931703|ref|XP_003211965.1| PREDICTED: matrix metalloproteinase-24-like [Meleagris gallopavo]
Length = 557
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 81/219 (36%), Gaps = 61/219 (27%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
+ R + L Q W I Y + H + + EL+ + R A W +V LT
Sbjct: 87 SRRKKRYALTGQKWRQKHITY-----SVHNYTPKVGELD--TRRAIRQAFDVWQRVTPLT 139
Query: 70 FEETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKAD 108
FEE H +DI ++ + + +D YF + +FD +
Sbjct: 140 FEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDE 199
Query: 109 VWRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVM 163
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 200 PWTLGNSNHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK--------- 250
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 251 ---LPQD----------------DLQGIQKIYGPPIEPL 270
>gi|301778036|ref|XP_002924430.1| PREDICTED: matrix metalloproteinase-23-like [Ailuropoda
melanoleuca]
Length = 393
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 182 IHFDDSEYWILGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 224
>gi|254502794|ref|ZP_05114945.1| hypothetical protein SADFL11_2833 [Labrenzia alexandrii DFL-11]
gi|222438865|gb|EEE45544.1| hypothetical protein SADFL11_2833 [Labrenzia alexandrii DFL-11]
Length = 1376
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 33/250 (13%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
++GND+V G+S ++V S+ N +G LDT Y + + + V D +
Sbjct: 1106 ATGNDLVAGSSNDDVLLGSTDNYALNGGKKLDTVVYDRTKDEVGLSGTRSGVTVTDGD-- 1163
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D L VE + F + +D + VI D S +
Sbjct: 1164 GADTLVAVELVVFTGA---------------NGTGQDRVLVINPDSSTSTGTY------- 1201
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
F+ +YL ++ D+ + + A HY HG E R D E+ +
Sbjct: 1202 ----GFNEAVYLTTHADVAAAVAAGAFSSGADHYALHGKSEDRTADLLFDAEFYLADNAD 1257
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAA-RH 509
+ A A K H+ FG E R V FD+ YL D+ +A +H
Sbjct: 1258 VAAAVAAGVFASASK-HYELFGSSENRSVNPLFDAEYYLAQNTDVAQAIADGMFVSAYQH 1316
Query: 510 YITHGVKEGR 519
++ HG +EGR
Sbjct: 1317 FLNHGDQEGR 1326
>gi|217978872|ref|YP_002363019.1| glycosyl transferase group 1 [Methylocella silvestris BL2]
gi|217504248|gb|ACK51657.1| glycosyl transferase group 1 [Methylocella silvestris BL2]
Length = 1220
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 90/263 (34%), Gaps = 92/263 (34%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-----------------NPDA 439
+ FD Y Y DL + SD RHY+ HG +EGR PD
Sbjct: 25 LDFDPVFYRFHYSDLHGL-NSDEDLR-RHYVLHGREEGRWKSRAEARNDFVSRFGALPDD 82
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
F+A Y HEDL AF DH F
Sbjct: 83 FQAHVYKELHEDLAKAF-----------DHEWQFEF------------------------ 107
Query: 500 GSDRGAAARHYITHGVKEGR------NP--DA-------FKALEYIASHEDLINAFADAP 544
HY+ HG KEGR NP DA F+ +++A + N + P
Sbjct: 108 ---------HYLEHGRKEGRRYKREGNPAGDAETSWITLFRLGDFVACAQ---NWLTEVP 155
Query: 545 DLVQAGKDHFSNFGYEEGRSI----TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
Q G F G E I F+P+ Y ++Y G +R+ H ++
Sbjct: 156 RTQQEGIALFLEAGIERLAPINLDFVFDPEFYRSAY-------GFERNKRDVELYRHWLE 208
Query: 601 EGRALGISGMQFKSVMNLSEKSR 623
G G+S + KS+ +L R
Sbjct: 209 IGMPNGLSPNEEKSLQDLLPSRR 231
>gi|83375894|gb|ABC17785.1| matrix metalloproteinase 24 variant [Homo sapiens]
Length = 593
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 80/215 (37%), Gaps = 55/215 (25%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 99 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 151
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 152 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 211
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
W G G L A+HE+GHALGL H P + Y++ ++ +
Sbjct: 212 WTLGNANHDGNDLFLVAVHELGHALGLEHSSD-----PSAIMAPFYQH----METHNFKL 262
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
PQD D+ +QKIYG P L
Sbjct: 263 PQD----------------DLQGIQKIYGPPAEPL 281
>gi|110633148|ref|YP_673356.1| heme peroxidase [Mesorhizobium sp. BNC1]
gi|110284132|gb|ABG62191.1| Animal heme peroxidase [Chelativorans sp. BNC1]
Length = 2950
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + ++++G++G+D + G + +++ +G+D+ +G G+D +
Sbjct: 2265 ISGNSGNNILTGAGGADTLIGNAGDDDLRGGANDDILEGGAGSDLLNGQGGIDIAIFAGS 2324
Query: 313 SYLYKIYRFENAI-IVYD-ANEHKQDFLSDVERLRFADQCI 351
+ Y N + V D + D L+ +ERLRF D +
Sbjct: 2325 AGDYSFSLGANGLATVTDLVGDGGTDTLTSIERLRFGDGPV 2365
>gi|299068226|emb|CBJ39445.1| Putative calcium binding hemolysin protein (modular protein)
[Ralstonia solanacearum CMR15]
Length = 1944
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G N + T +S++G SGND + G + N+ SGND G G DT
Sbjct: 1168 SIDGGADNDYLYGETGDDSLLGGSGNDTLYGGNGNDTLEGGSGNDYLTGEGGSDT----- 1222
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL--------SDVERLRFADQCIDSV-NVKQRSIL 362
Y++ ++ I YDA+ + D + +DV R + I S+ N R +
Sbjct: 1223 --YVFNSGWGQDTIGNYDASTGRSDVIEFGSGIAATDVIATRSGEDLILSIRNGSDRVTV 1280
Query: 363 EY 364
+Y
Sbjct: 1281 QY 1282
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+V GND V G++ N+ SGND G +G DT+ + S IY ++ + +A
Sbjct: 585 LVAKGGNDYVYGDAGNDTLDGGSGNDYLSGGTGADTYLFGKGSAQDTIYNYDGEAVGTNA 644
Query: 331 NE--HKQDFLS-DVERLRFADQCIDSVN 355
+ D S DV R D I +N
Sbjct: 645 DTILLGTDITSTDVTLTRSGDDLIIRIN 672
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N + T +S++G SGND + G + N+ SGND G G DT
Sbjct: 1568 SVDGGADNDYLYGETGDDSLLGGSGNDTLYGGAGNDTLEGGSGNDYLTGEGGSDT----- 1622
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL--------SDVERLRFADQCIDSV-NVKQRSIL 362
Y++ ++ I YD+ + D + +DV R + I S+ N R +
Sbjct: 1623 --YVFNSGWGQDTIGNYDSTSGRSDVITFGDGIAATDVIATRSGEDLILSLRNSTDRVTV 1680
Query: 363 EY 364
+Y
Sbjct: 1681 QY 1682
>gi|73956582|ref|XP_848890.1| PREDICTED: similar to matrix metalloproteinase 23B precursor [Canis
familiaris]
Length = 394
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 183 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 225
>gi|221106326|ref|XP_002155089.1| PREDICTED: similar to matrix metalloproteinase [Hydra
magnipapillata]
Length = 386
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 58 ALGEWSKVVDLTFEETSIHS------DIKFISSNNGYVCTPR---YD-SRYFMEINFDKA 107
A +W + DLTF + S S DIKF+ ++G + R YD + F +N
Sbjct: 28 AFQKWEAIADLTFNKLSFTSKEQADIDIKFVQGDHGDAFSFRLFRYDLAHAFYPLNNQGI 87
Query: 108 -------DVWRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGG--YPVY 147
D++ + + + G L A+HEIGH+LGL H S+ G YP Y
Sbjct: 88 SGDVHFNDIFNFNVKEKNGVNLFWAAIHEIGHSLGLHH-SSFQGSLMYPTY 137
>gi|2961326|emb|CAA04800.1| bacteriocin [Rhizobium leguminosarum]
Length = 958
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E + I + +V+G+SGND + G N+VF GNDV G+ G D YLY
Sbjct: 258 ETILDIGRDDDAPTVIGTSGNDTLNGTGDNDVFDGGQGNDVLVGARGSD-------KYLY 310
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYT-ASYEDLIQV 374
++ + I + D+L+DV+ L+ + D V V L+ T S D+I V
Sbjct: 311 RLGDGSDLI-------DEVDWLNDVDTLKLINISSSDVVAVHNGVNLQITITSTGDVITV 363
Query: 375 IGQ 377
Q
Sbjct: 364 KDQ 366
>gi|260365709|ref|ZP_05778223.1| type 1 secretion C-terminal domain protein [Vibrio parahaemolyticus
K5030]
gi|308111800|gb|EFO49340.1| type 1 secretion C-terminal domain protein [Vibrio parahaemolyticus
K5030]
Length = 1982
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
F T+ DSG D I + + + E +SI G E + +++ G +G+
Sbjct: 1792 FTLTLNDSGTD-------IAQTERHASVGDEFANSITGGESIDILLGQAGEDTLSGGAGD 1844
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+++G N++ G+D+ G G+DTF + S R + I + +E K D
Sbjct: 1845 DILVGGLGNDILTGGLGSDILTGGEGIDTFTFTQESLDMTSSR--DVIKDFRLDEDKLD- 1901
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
LSD+ F D D N+ + +Y ++ + L
Sbjct: 1902 LSDILEF-FGDDTTDMDNLLEHVSADYDSAQDTL 1934
>gi|240142877|ref|YP_002967390.1| putative peptidase [Methylobacterium extorquens AM1]
gi|240012824|gb|ACS44049.1| putative peptidase [Methylobacterium extorquens AM1]
Length = 1045
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 206 IYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+Y E + + T+ D+ GG D L+ + V I + + +I G + +++A
Sbjct: 524 VYTDEFRVYGAGTRATLRDADGGIDTLNASP---VTTAIAFDLATGGTIAG--RAVSVAS 578
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
TV+E+ V G+D + GN+A+N G+DV DG +G
Sbjct: 579 GTVLENFVAGDGDDRITGNAADNRLLGGRGDDVLDGGAG 617
>gi|16758396|ref|NP_446058.1| matrix metalloproteinase-23 [Rattus norvegicus]
gi|81882179|sp|O88272|MMP23_RAT RecName: Full=Matrix metalloproteinase-23; Short=MMP-23; AltName:
Full=Metaloprotease in the female reproductive tract;
Short=MIFR; Contains: RecName: Full=Matrix
metalloproteinase-23, soluble form; Flags: Precursor
gi|2879941|dbj|BAA24832.1| MIFR [Rattus norvegicus]
gi|55824684|gb|AAH86586.1| Matrix metallopeptidase 23 [Rattus norvegicus]
gi|149024817|gb|EDL81314.1| matrix metallopeptidase 23 [Rattus norvegicus]
Length = 391
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 180 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 222
>gi|17549401|ref|NP_522741.1| putative hemagglutinin/hemolysin-related protein [Ralstonia
solanacearum GMI1000]
gi|17431654|emb|CAD18331.1| probable hemagglutinin/hemolysin-related protein [Ralstonia
solanacearum GMI1000]
Length = 4106
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 15/123 (12%)
Query: 200 GSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK----------NYIDLN 246
G LG N + + +Q DS + + ++G LL+++L+G + N
Sbjct: 3868 GLLGINASLLSSVTIQATDSTSLSSTANAG--QLLNVSLLGTTQPSAIIEGTSGNNTLTG 3925
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + GY + T+ + + G +GNDV+ G N++ +GND G +G D
Sbjct: 3926 TSGNDRLYGYAGDDTLNAGAGNDLLRGGAGNDVLNGGDGNDILIGGAGNDTLTGGAGGDI 3985
Query: 307 FFY 309
F +
Sbjct: 3986 FLW 3988
>gi|332710683|ref|ZP_08430626.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332350559|gb|EGJ30156.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 564
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
TV +V G+ GND +IG SAN+V GND+ G+SG D F + + + + F+
Sbjct: 447 TVNGTVFGNEGNDTLIGGSANDVLNGGVGNDLLTGNSGADIFAFGSEIFQDGLQDFD 503
>gi|326932338|ref|XP_003212276.1| PREDICTED: matrix metalloproteinase-23-like [Meleagris gallopavo]
Length = 400
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 26/111 (23%)
Query: 58 ALGEWSKVVDLTFEETSIH--SDIK--FISSNNG-------YVC----TPRYDSRYFM-- 100
A WS+V +F E H SD+K F S N+ + C T +F
Sbjct: 127 AFQMWSEVSPFSFREVPRHAPSDLKIGFYSINHTDCLESLIHHCFDGTTGELAHAFFPPN 186
Query: 101 -EINFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMHPGSYNG 142
EI+FD + W R+ KG L+ H A HEIGHALGLMH + N
Sbjct: 187 GEIHFDDHEYWILGNTRFSWKKGVWLTDLVHVAAHEIGHALGLMHSQNPNA 237
>gi|34395498|sp|Q44495|ALGE2_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 2; AltName:
Full=Mannuronan epimerase 2
gi|790693|gb|AAA87312.1| mannuronan C-5-epimerase [Azotobacter vinelandii]
Length = 997
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL+ +GG +D T + G + N T++ + E ++G GND + G + N++
Sbjct: 809 DLSALGGANLILDART----VLAGGDGNDTLSGSSAAEELLGGVGNDSLDGGAGNDILDG 864
Query: 292 SSGNDVFDGSSGLDTFFY 309
+G D G SG D F +
Sbjct: 865 GAGRDTLSGGSGSDIFRF 882
>gi|268679619|ref|YP_003304050.1| Hemolysin-type calcium binding domain protein [Sulfurospirillum
deleyianum DSM 6946]
gi|268617650|gb|ACZ12015.1| Hemolysin-type calcium binding domain protein [Sulfurospirillum
deleyianum DSM 6946]
Length = 4798
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ +GND ++GN N+V + +GNDV +G G D A + Y R + + +Y
Sbjct: 1872 DTINSGAGNDTLLGNEGNDVLYGEAGNDVLNGGKGADNLQGGAGNDTYIFKRGDGSDTIY 1931
Query: 329 D 329
D
Sbjct: 1932 D 1932
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ-QKDSPFIQTIY 223
+F + + +F T +DIV +Q A L + + + Q +QT
Sbjct: 2001 WFSTNNRVESFTFSDGTTLSTNDIVNLQGTEDADTVHLMDTTSDVTISMQGGDDVVQT-- 2058
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
SGG+D++D GG+ N ++ G E N + + ++G G+D ++G
Sbjct: 2059 -SGGNDIID----GGLGNDTLKGGAGNDTLLGAEGNDVLYGEKGDDVLLGGVGDDTLLGA 2113
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N++ G+DV G +G DT+ Y S
Sbjct: 2114 EGNDILEGGMGSDVLQGGAGTDTYLYSKNS 2143
>gi|315499282|ref|YP_004088086.1| glycosyl transferase family 2 [Asticcacaulis excentricus CB 48]
gi|315417294|gb|ADU13935.1| glycosyl transferase family 2 [Asticcacaulis excentricus CB 48]
Length = 1138
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 36/232 (15%)
Query: 399 FDSYLYLGSYDD-LR---NVFGSDRGAAARHYITHGVKEGRNP-----DAFKALEYI-AS 448
F++++YL +Y D LR N F HYI G EGR+ DAF +++ + A
Sbjct: 200 FNTHVYLHNYPDVLRAGINPFV--------HYIQSGRFEGRSSAPLLDDAFISIQPLHAE 251
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG--SYDDLRNVFGSDRGAA 506
D A + +V D SN EE + T S + + +D +
Sbjct: 252 TRDAAQAVTQPSESTEVQTDA-SN---EEPQLETLPQTALSEPLSNEASKGTLINDIHWS 307
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-ADAPDLVQAGKDHFSNFGYEEGR-- 563
R I +G+K R D +++++ I + AF A+ L K H ++ E R
Sbjct: 308 VRTAIKYGIK--RAVDGYRSVQVIRRQGNFNQAFYAEQVGLRLRPKHHVWHYVIEGSRCG 365
Query: 564 ---SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
S F+ + YLT YDD V S R A HY+ G++E R + S F
Sbjct: 366 FDPSPNFSAEKYLTFYDD---VKASGREPYA-HYLKFGIRENRTIVPSQSPF 413
>gi|291383989|ref|XP_002708607.1| PREDICTED: matrix metalloproteinase 10 [Oryctolagus cuniculus]
Length = 477
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFL 159
+++FD + W GT L A HE+GH+LGL+H + YPVY
Sbjct: 194 DVHFDDDEKWTES-ASGTNLFLVAAHELGHSLGLLHSANPEALMYPVYNT---------F 243
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
T + + + QD D+ +Q +YG P S G ++ E
Sbjct: 244 TDLARFRLSQD----------------DVDGIQSLYGPPPTSPGTSVVPTE 278
>gi|254502410|ref|ZP_05114561.1| hypothetical protein SADFL11_2449 [Labrenzia alexandrii DFL-11]
gi|222438481|gb|EEE45160.1| hypothetical protein SADFL11_2449 [Labrenzia alexandrii DFL-11]
Length = 806
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 49/189 (25%)
Query: 364 YTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRG 420
Y A+ D+ I +F+S ++HF FG SEGRD FD+ YL D+
Sbjct: 10 YLANNPDVAAAIDAGLFQSAVEHFNLFGWSEGRDPNENFDTSFYLSENPDV--------- 60
Query: 421 AAA-----RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
AAA H+ +G EGR P+ I+ PD + G D
Sbjct: 61 AAAGVNPLDHFWVYGAAEGRIPNQ------------TIDTLLGQPD-IGGGDD------- 100
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
FDS YL + D++ + A +H++ +G E R D +AL S D
Sbjct: 101 ------AFDSATYLAANPDVQAAVEAGSFTAYQHWVLYGQFENR--DGAQAL----SGTD 148
Query: 536 LINAFADAP 544
L + D P
Sbjct: 149 LSSVVLDTP 157
>gi|115345580|ref|YP_771762.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
gi|115292901|gb|ABI93354.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
Length = 2517
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 16/159 (10%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + + +++VG SGND + G S ++ F G D+ DG SG + F Y+ +
Sbjct: 1498 GLEGDDVLEGRGGTDTLVGGSGNDTLRGGSEDDYLFGGKGADILDGGSGANDFAQYSAAI 1557
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLR--------FADQCIDSVNVKQ-RSILEYT 365
+ +A + + E D +E L + + + +N IL+
Sbjct: 1558 SSIVASLRDASV--NRGEATGDTFFGIEHLAGSAHDDELYGNNKTNVLNGGDGNDILDGG 1615
Query: 366 ASYEDLIQVIGQDVF-----ESMKHFYEFGLSEGRDITF 399
A + +G D F + Y+F S+G I+F
Sbjct: 1616 AGQDHYTGGLGADTFVHDGGRNQDVIYDFNPSQGDRISF 1654
>gi|291567289|dbj|BAI89561.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2881
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+Y +D L GG N + + + G + N TI + + G GND++
Sbjct: 312 TLYGGADNDFL----FGGTGNDLLFGDDGNDELVGGKGNDTIFGGPGDDIIFGGDGNDIL 367
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF 307
G N+ F GND+ +G G+DT
Sbjct: 368 RGGKGNDRIFGDEGNDLLEGGRGVDTL 394
>gi|148240014|ref|YP_001225401.1| hypothetical protein SynWH7803_1678 [Synechococcus sp. WH 7803]
gi|147848553|emb|CAK24104.1| Conserved hypothetical protein (contains a HExxH zinc-binding site)
[Synechococcus sp. WH 7803]
Length = 793
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 30/142 (21%)
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT--SVMSYFMPQDSMMDASFG 178
++ +HEIGHALGL HP + D N + T +VMSY + D G
Sbjct: 48 ANTIIHEIGHALGLSHP------------NEDPTNPQWTTDDTVMSYNISSD-------G 88
Query: 179 YCATPMVSDIVAVQKIYG----AP-----KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
+ T +DI A+Q I+G AP + SL + V +Q D GD
Sbjct: 89 WDYTFSEADIAALQIIWGTENSAPIISGTQASLTSTPEDTTVTLTADSLLQGFSDPDGDS 148
Query: 230 LLDLTLIGGVKNYIDLNTESWS 251
L L + N ++WS
Sbjct: 149 LSISNLTADNGTLTNNNNDTWS 170
>gi|297666705|ref|XP_002811653.1| PREDICTED: matrix metalloproteinase-23-like [Pongo abelii]
Length = 390
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 179 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 221
>gi|254502450|ref|ZP_05114601.1| hypothetical protein SADFL11_2489 [Labrenzia alexandrii DFL-11]
gi|222438521|gb|EEE45200.1| hypothetical protein SADFL11_2489 [Labrenzia alexandrii DFL-11]
Length = 432
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 30/223 (13%)
Query: 125 LHEIGHALGLMHPGSY-----NGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFG 178
LHEIGH LGL HPG Y N P D D E +VMSY P +
Sbjct: 212 LHEIGHTLGLKHPGDYDRGGNNPAGPFLPADEDNER----WTVMSYNPDPSTDIEPDRLK 267
Query: 179 YCATPMVSDIVAVQKIYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
+ DI+A+Q+ +G G+ N+ + + ++ F D L L
Sbjct: 268 FY------DIMALQQFWGTNNGNQDSAQNVMRFYNTKTETHFYTANADERDQVLAYLEDY 321
Query: 237 GGVKNYIDLNTESWSSIGGYE-KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
N D N + S I Y N + H + D V+ N + FE
Sbjct: 322 IFEGNMFDTNATAESGIAVYRFLNQSTGTHFY---TAAEAERDSVLENLP-SYLFEGVAY 377
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
++ + +T L++ Y +N Y A+E ++D++
Sbjct: 378 HAYETADAGET-------ALFRFYNTQNGTHFYTASEAERDYV 413
>gi|118100493|ref|XP_417326.2| PREDICTED: similar to MMP24 protein [Gallus gallus]
Length = 565
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 61/215 (28%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
+ R + L Q W I Y + H + + EL+ + R A W +V LT
Sbjct: 70 SRRKKRYALTGQKWRQKHITY-----SVHNYTPKVGELD--TRRAIRQAFDVWQRVTPLT 122
Query: 70 FEETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKAD 108
FEE H +DI ++ + + +D YF + +FD +
Sbjct: 123 FEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDE 182
Query: 109 VWRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVM 163
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 183 PWTLGNSNHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK--------- 233
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+PQD D+ +QKIYG P
Sbjct: 234 ---LPQD----------------DLQGIQKIYGPP 249
>gi|284054052|ref|ZP_06384262.1| Integrins alpha chain [Arthrospira platensis str. Paraca]
Length = 288
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++++GS GND + GN N+ +G+D G G DTF Y +P+ +
Sbjct: 176 DTLIGSDGNDSLFGNLGNDCLIGGAGDDTLVGGEGSDTFAYLSPNQI 222
>gi|108995571|ref|XP_001095296.1| PREDICTED: matrix metalloproteinase-23 [Macaca mulatta]
Length = 390
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 179 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 221
>gi|5902004|ref|NP_008914.1| matrix metalloproteinase-23 precursor [Homo sapiens]
gi|117949605|sp|O75900|MMP23_HUMAN RecName: Full=Matrix metalloproteinase-23; Short=MMP-23; AltName:
Full=Femalysin; AltName: Full=MIFR-1; AltName:
Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
Full=Matrix metalloproteinase-22; Short=MMP-22;
Contains: RecName: Full=Matrix metalloproteinase-23,
soluble form; Flags: Precursor
gi|2879943|dbj|BAA24833.1| MIFR-1 [Homo sapiens]
gi|3645918|gb|AAC63527.1| metalloprotease isoform A [Homo sapiens]
gi|4468604|emb|CAB38176.1| MMP-23 [Homo sapiens]
gi|7259308|dbj|BAA92769.1| MIFR/Femalysin [Homo sapiens]
gi|19343598|gb|AAH25719.1| Matrix metallopeptidase 23B [Homo sapiens]
gi|61364613|gb|AAX42573.1| matrix metalloproteinase 23B [synthetic construct]
Length = 390
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 179 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 221
>gi|60810636|gb|AAX36150.1| matrix metalloproteinase 23B [synthetic construct]
Length = 391
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 179 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 221
>gi|330959384|gb|EGH59644.1| glycosyl transferase group 1 [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 471
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 38/197 (19%)
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINA--------FADAPDLVQVGKD---HFS 471
A+HY+ +G EGR K + + L+N + PD+ G D HF
Sbjct: 28 AQHYLDYGHAEGR-----KYQDISVEKKQLLNLGIFDPDFYLSQYPDVSSAGLDPAEHFL 82
Query: 472 NFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ GC EGR+ + F S Y+ + + R S HY G + G P+ F EY
Sbjct: 83 SSGCAEGRWASLFFRSDWYMDCHPESR----SHHKNCLFHYSETGSRLGYEPNPFFEPEY 138
Query: 530 IAS-HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
++ ++D I +Q HF G+E+ + +P +Y G+
Sbjct: 139 YSTKYKDQIG--------LQEPLAHFIKHGHED---LNPSPRFDAAAYIKATGCSGN--- 184
Query: 589 AAAQHYITHGMKEGRAL 605
+HY+ GM+ G L
Sbjct: 185 -PLKHYLETGMQAGAPL 200
>gi|260902087|ref|ZP_05910482.1| type 1 secretion C-terminal domain protein [Vibrio parahaemolyticus
AQ4037]
gi|308109918|gb|EFO47458.1| type 1 secretion C-terminal domain protein [Vibrio parahaemolyticus
AQ4037]
Length = 1982
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
F T+ DSG D I + + + E +SI G E + +++ G +G+
Sbjct: 1792 FTLTLNDSGTD-------IAQTERHASVGDEFANSITGGESIDILLGQAGEDTLSGGAGD 1844
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+++G N++ G+D+ G G+DTF + S R + I + +E K D
Sbjct: 1845 DILVGGLGNDILTGGLGSDILTGGEGIDTFTFTQESLDMTSSR--DVIKDFRLDEDKLD- 1901
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
LSD+ F D D N+ + +Y ++ + L
Sbjct: 1902 LSDILEF-FGDDTTDMDNLLEHVSADYDSAQDTL 1934
>gi|3650496|gb|AAC62616.1| metalloprotease mmp21/22A [Homo sapiens]
Length = 390
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 179 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 221
>gi|307592277|ref|YP_003899868.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985922|gb|ADN17802.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 301
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+GG ++ I +++ ++ G +GND ++G N+ E +GND+ G +G D F Y
Sbjct: 133 LGGSSEDCLIG-NSLNNTITGGAGNDTLLGGGGNDSLIEGAGNDILTGGTGNDKFIY 188
>gi|284050049|ref|ZP_06380259.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
gi|291565710|dbj|BAI87982.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 664
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N + +++ G E+N + + + ++G +G+D ++G + N+ F SGND+ DG G D
Sbjct: 462 NLQGNNTVEGSERNDLLVTGSGNDLLLGGNGDDTLLGGAGNDFLFGGSGNDLLDGGPGDD 521
Query: 306 TF-FYYAPSYLYK-------IYRFENAIIVYDANEHKQDF 337
T + + L YRF A+ + + DF
Sbjct: 522 TLEGGFGVNTLVGGEGDNQFFYRFSEAVKTTTSADFITDF 561
>gi|209528317|ref|ZP_03276775.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491250|gb|EDZ91647.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 848
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYE 257
+G+ GN++ + +P TIY G+D TLIGG N Y+D + S +GG
Sbjct: 608 RGTRGNDLLR------GTPGHDTIYGLAGND----TLIGGKGNDYLDGGPGNDSLLGGAG 657
Query: 258 KNMTIAQH--------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ I +S++G G D +IG + N+ G D+ G G D F +
Sbjct: 658 HDTLIGGKGNDYLDGGPGNDSLLGGPGRDTLIGGAGNDTLNGGPGQDILTGGPGADIFVF 717
>gi|297708400|ref|XP_002830961.1| PREDICTED: stromelysin-3-like, partial [Pongo abelii]
Length = 452
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-------------I 75
R++ LT L F + Q++ AL WS V LTF E
Sbjct: 68 RWEKTDLTYRILRFPWQLVQEQVQQMMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYW 127
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
H D G + + + +++FD + W G +GT L A HE GH LGL
Sbjct: 128 HGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGL 187
Query: 135 MH 136
H
Sbjct: 188 QH 189
>gi|296206497|ref|XP_002750233.1| PREDICTED: matrix metalloproteinase-23 [Callithrix jacchus]
Length = 390
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 179 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 221
>gi|149733599|ref|XP_001499275.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
(predicted) [Equus caballus]
Length = 666
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 61/218 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 172 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 224
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 225 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 284
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 285 WTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK---------- 334
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P L
Sbjct: 335 --LPQD----------------DLQGIQKIYGPPAEPL 354
>gi|37726919|gb|AAO63003.1| collagenase 4 [Necturus maculosus]
Length = 237
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 34 VLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEETSIHS-----DIKFIS 83
V T +++ I P N + + + A WS V L F T I +I F++
Sbjct: 39 VWETTTVTYRILNFTPDMPRANVENLIQKAFKVWSDVTHLKF--TRIFDGISDIEISFVA 96
Query: 84 SNNG---------YVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++G +D Y + +++FD+ + W G GT+L + A HEIGHAL
Sbjct: 97 GDHGDNSPFDGPGEFLAHAFDPGYGVGGDVHFDEDETWSKG-EDGTVLFNIAAHEIGHAL 155
Query: 133 GLMH---PGS 139
GL H PG+
Sbjct: 156 GLAHSKDPGA 165
>gi|50759211|ref|XP_417569.1| PREDICTED: similar to Matrix metallopeptidase 23B [Gallus gallus]
Length = 400
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 101 EINFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMHPGSYNG 142
EI+FD + W R+ KG L+ H A HEIGHALGLMH + N
Sbjct: 188 EIHFDDHEYWILGNTRFSWKKGVWLTDLVHVAAHEIGHALGLMHSQNPNA 237
>gi|85715919|ref|ZP_01046897.1| Putative glycosyl transferase [Nitrobacter sp. Nb-311A]
gi|85697326|gb|EAQ35206.1| Putative glycosyl transferase [Nitrobacter sp. Nb-311A]
Length = 176
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGR--NPDAFKALEYIASHEDLINA 539
FD YL +Y D+ S R + H+ + G EGR +P + Y+ ++ D+ A
Sbjct: 45 FDEDWYLTTYPDIAAAVSSTRFPSGWAHFRSVGYLEGRLGSPTIVDSEWYLETYPDVAQA 104
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
+ + + +HF NFGY EGR
Sbjct: 105 MLEG--KIASAAEHFENFGYAEGR 126
>gi|118592169|ref|ZP_01549562.1| VCBS protein [Stappia aggregata IAM 12614]
gi|118435141|gb|EAV41789.1| VCBS protein [Stappia aggregata IAM 12614]
Length = 1473
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
IE+ +G+ +DV++GN NN+FF + G+D+ DG G
Sbjct: 102 IENAIGTVNDDVMLGNGLNNIFFGNGGSDIIDGRGG 137
>gi|186683528|ref|YP_001866724.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
gi|186465980|gb|ACC81781.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
Length = 1687
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 254 GGYEKNMTIAQHTVIESV--VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG E ++ + + + +S +G++GND + G + N++ GND DG G DT A
Sbjct: 298 GGTEDDVLVGDYVITQSQFDLGAAGNDTISGGAGNDIILGDGGNDSLDGGDGTDTILGGA 357
>gi|296479001|gb|DAA21116.1| matrix metalloproteinase 23B precursor [Bos taurus]
Length = 393
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 182 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 224
>gi|330943695|gb|EGH45989.1| calcium binding hemolysin protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 698
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+K + +T++ S+ GYE + I +S+ GS GND + G + ++ +GND
Sbjct: 335 IKTEVLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTL 394
Query: 299 DGSSGLDTF 307
G SG DT
Sbjct: 395 IGGSGADTL 403
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + T++ +++ G+ GNDV+ G + ++V + G+DV DG +G D A
Sbjct: 566 TVNGMAGSDTLSGGAGADTLNGNDGNDVLQGGADDDVLYGGDGSDVLDGGAGNDRLDGGA 625
Query: 312 PSYLYKIYRFENAIIVYDANEHK 334
+Y + +Y ANE +
Sbjct: 626 GDDIYIFCKGAGQDSIYYANETR 648
>gi|229368716|gb|ACQ62999.1| matrix metalloproteinase 24 preproprotein (predicted), 5 prime
[Dasypus novemcinctus]
Length = 245
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 69 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 121
Query: 71 EETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKADV 109
EE H +DI ++ + + +D YF + +FD +
Sbjct: 122 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 181
Query: 110 WRYGIGK--GTILSHNALHEIGHALGLMH 136
W G G L A+HE+GHALGL H
Sbjct: 182 WTLGNANHDGNDLFLVAVHELGHALGLEH 210
>gi|330950562|gb|EGH50822.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae Cit 7]
Length = 225
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y I+ Q + +Q D G D L + + I+LN + ++ +
Sbjct: 19 GGLGNDTYVID-QAGELDLVQEKADQGVDTLKITYDNTSPIAQVINLNAGTLANF----E 73
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFY 309
N+ + +V+G+ N+ + GN A+NV F +GN D+ G SG D F +
Sbjct: 74 NVHLKGEGAF-TVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVF 132
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
S + K + N+ ++ D N + D LS
Sbjct: 133 NDLSEMGKGH---NSDVITDFNSQQGDKLS 159
>gi|328780642|ref|XP_393358.4| PREDICTED: matrix metalloproteinase-14-like [Apis mellifera]
Length = 575
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 55/141 (39%), Gaps = 27/141 (19%)
Query: 12 RIADHLLRDQYWSNYFIRYK----PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
R + L+ W + YK P L H++ ELN A WS+ D
Sbjct: 113 RSKRYALQGSRWRVKKLSYKISKYPRNLPQHKVD---AELNK--------AFKVWSEYTD 161
Query: 68 LTF---EETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIG 115
L F + +H +I+F +G Y Y + +FD A+ W
Sbjct: 162 LVFVQKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDSF 221
Query: 116 KGTILSHNALHEIGHALGLMH 136
+GT L A HE GH+LGL H
Sbjct: 222 RGTNLFQVAAHEFGHSLGLSH 242
>gi|121483790|gb|ABM54447.1| polyurethanase A [Pseudomonas chlororaphis]
Length = 616
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+Q K+ F+ ++ DD++ G+K L T+ SS+ G + + H +
Sbjct: 452 IQSKEPGFLWGLFK---DDVIHQVTDQGLKAGGQL-TQYASSVRGDAGDNVLKAHAGGDW 507
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G GND +IG N+VF +GND+ + G +TF +
Sbjct: 508 LFGLDGNDHLIGGQGNDVFVGGAGNDLMEAGGGNNTFLF 546
>gi|84370137|ref|NP_001033645.1| matrix metalloproteinase-23 precursor [Bos taurus]
gi|117940110|sp|Q2TBM7|MMP23_BOVIN RecName: Full=Matrix metalloproteinase-23; Short=MMP-23; AltName:
Full=Matrix metallopeptidase 23B; Contains: RecName:
Full=Matrix metalloproteinase-23, soluble form; Flags:
Precursor
gi|83638695|gb|AAI09903.1| Matrix metallopeptidase 23B [Bos taurus]
Length = 393
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 182 IHFDDSEYWVLGRTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 224
>gi|13786841|pdb|1HV5|A Chain A, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786842|pdb|1HV5|B Chain B, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786843|pdb|1HV5|C Chain C, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786844|pdb|1HV5|D Chain D, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786845|pdb|1HV5|E Chain E, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786846|pdb|1HV5|F Chain F, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
Length = 165
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 18/124 (14%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH---SDI-----K 80
R++ LT L F + ++ AL WS+V LTF T +H +DI +
Sbjct: 8 RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTF--TEVHEGRADIMIDFAR 65
Query: 81 FISSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ +N G + + + E ++FD + W G +GT L A HE GH L
Sbjct: 66 YWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQVAAHEFGHVL 125
Query: 133 GLMH 136
GL H
Sbjct: 126 GLQH 129
>gi|291567578|dbj|BAI89850.1| hemolysin-type calcium-binding region protein [Arthrospira platensis
NIES-39]
Length = 1598
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++++GS GND + GN N+ +G+D G G DTF Y +P+ +
Sbjct: 1115 DTLIGSDGNDSLFGNLGNDCLIGGAGDDTLVGGEGSDTFAYLSPNQI 1161
>gi|220922519|ref|YP_002497821.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
gi|219947126|gb|ACL57518.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
Length = 340
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 250 WSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
W++ +G E ++ + ++VVG+SG+D + G +AN++ + G D G G DTF
Sbjct: 183 WTAPFVGYGEGDIAVLSGDQPQTVVGTSGSDTLWGGTANDIITGALGADTITGGGGADTF 242
Query: 308 FY 309
Y
Sbjct: 243 VY 244
>gi|4558791|gb|AAD22743.1| polyurethanase esterase A [Pseudomonas chlororaphis]
Length = 617
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+Q K+ F+ ++ DD++ G+K L T+ SS+ G + + H +
Sbjct: 453 IQSKEPGFLWGLFK---DDVIHQVTDQGLKAGGQL-TQYASSVRGDAGDNVLKAHAGGDW 508
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G GND +IG N+VF +GND+ + G +TF +
Sbjct: 509 LFGLDGNDHLIGGQGNDVFVGGAGNDLMEAGGGNNTFLF 547
>gi|70730566|ref|YP_260307.1| secreted hemolysin-type calcium-binding bacteriocin [Pseudomonas
fluorescens Pf-5]
gi|68344865|gb|AAY92471.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Pseudomonas fluorescens Pf-5]
Length = 617
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+Q K+ F+ ++ DD++ G+K L T+ SS+ G + + H +
Sbjct: 453 IQSKEPGFLWGLFK---DDVIHQVTDQGLKAGGQL-TQYASSVRGDAGDNVLKAHAGGDW 508
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G GND +IG N+VF +GND+ + G +TF +
Sbjct: 509 LFGLDGNDHLIGGQGNDVFVGGAGNDLMEAGGGNNTFLF 547
>gi|17228286|ref|NP_484834.1| outer membrane secretion protein [Nostoc sp. PCC 7120]
gi|17130136|dbj|BAB72748.1| outer membrane secretion protein [Nostoc sp. PCC 7120]
Length = 993
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 199 KGSLGNNIYKIE------VQQKDS---PFIQTIYDSGGDDLLDLTLIG-----GVKNYID 244
+G LGN++Y+I+ ++ D+ I ++ + G +L +LTL+G G+ N +D
Sbjct: 738 EGGLGNDVYEIDSVGDVIIEAADAGIDTVISSVDWTLGVNLENLTLVGNQATLGIGNDLD 797
Query: 245 ---LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + + G N + + + GS GND++ G + N+ F S GND+ +G
Sbjct: 798 NRITGNNADNVLFGEAGNDILNGGAGNDELFGSDGNDILNGGAGNDELFGSDGNDILNGG 857
Query: 302 SGLDTFFYYA 311
+G D F A
Sbjct: 858 AGNDELFGGA 867
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + GS GND++ G + N+ F +GND+ +G +G D+F + P + F
Sbjct: 843 DELFGSDGNDILNGGAGNDELFGGAGNDILNGGTGADSFSFGNPGNPFNNSDF 895
>gi|119909610|ref|XP_584877.3| PREDICTED: matrix metallopeptidase 11-like [Bos taurus]
gi|297485001|ref|XP_002694738.1| PREDICTED: matrix metallopeptidase 11-like [Bos taurus]
gi|296478350|gb|DAA20465.1| matrix metallopeptidase 11-like [Bos taurus]
Length = 466
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 14/122 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFI 82
R++ LT L F L ++ AL WS V LTF E +DI ++
Sbjct: 82 RWEKTDLTYRILRFPWQLLREQVRQTVAEALQVWSDVTPLTFTEVHEGRADIVIDFTRYW 141
Query: 83 SSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N G + + + E ++FD + W G +GT L A HE GH LGL
Sbjct: 142 HGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQVAAHEFGHVLGL 201
Query: 135 MH 136
H
Sbjct: 202 QH 203
>gi|313496540|gb|ADR57906.1| Surface adhesion protein, putative [Pseudomonas putida BIRD-1]
Length = 8682
Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+++ G GND+++G + N+ G+D+ G SG DTF + A
Sbjct: 8541 DTLNGGKGNDILLGGTGNDTLIGGQGDDILIGGSGADTFVWKA 8583
>gi|26986912|ref|NP_742337.1| surface adhesion protein, putative [Pseudomonas putida KT2440]
gi|24981520|gb|AAN65801.1|AE016208_1 surface adhesion protein, putative [Pseudomonas putida KT2440]
Length = 8682
Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+++ G GND+++G + N+ G+D+ G SG DTF + A
Sbjct: 8541 DTLNGGKGNDILLGGTGNDTLIGGQGDDILIGGSGADTFVWKA 8583
>gi|226947105|ref|YP_002802178.1| secreted mannuronan C-5 epimerase [Azotobacter vinelandii DJ]
gi|226722032|gb|ACO81203.1| Secreted mannuronan C-5 epimerase [Azotobacter vinelandii DJ]
Length = 1403
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T +++ G N ++ E+++G +G+D + G++ N++ +G D G +G DT
Sbjct: 380 TGQQATLEGSAGNDALSGTEAHETLLGQAGDDRLNGDAGNDILDGGAGRDNLTGGAGADT 439
Query: 307 FFYYAPSYLYKI--YRFENAIIVYDANEHKQDF 337
F + A + Y+ F + I +DA+E D
Sbjct: 440 FRFSARTDSYRTDSASFNDLITDFDADEDSIDL 472
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 20/91 (21%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFD------------------GSSGLDTFF 308
+E G+ GNDV++G+ AN+ + +G+D D G +G DTF
Sbjct: 1221 TVEVPQGTDGNDVLVGSDANDQLYGGAGDDRLDGGAGDDQLDGGAGRDDLTGGTGADTFV 1280
Query: 309 YYA--PSYLYKIYRFENAIIVYDANEHKQDF 337
+ A SY F + I+ +DA+E + D
Sbjct: 1281 FAARTDSYRTDAGVFNDLILDFDASEDRIDL 1311
>gi|260878364|ref|ZP_05890719.1| flagellin hook IN domain protein [Vibrio parahaemolyticus AN-5034]
gi|308090276|gb|EFO39971.1| flagellin hook IN domain protein [Vibrio parahaemolyticus AN-5034]
Length = 2437
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
F T+ DSG D I + + + E +SI G E + +++ G +G+
Sbjct: 2247 FTLTLNDSGTD-------IAQTERHASVGDEFANSITGGESIDILLGQAGEDTLSGGAGD 2299
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+++G N++ G+D+ G G+DTF + S R + I + +E K D
Sbjct: 2300 DILVGGLGNDILTGGLGSDILTGGEGIDTFTFTQESLDMTSSR--DVIKDFRLDEDKLD- 2356
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
LSD+ F D D N+ + +Y ++ + L
Sbjct: 2357 LSDILEF-FGDDTTDMDNLLEHVSADYDSAQDTL 2389
>gi|153836909|ref|ZP_01989576.1| putative biofilm-associated surface protein [Vibrio parahaemolyticus
AQ3810]
gi|149749867|gb|EDM60612.1| putative biofilm-associated surface protein [Vibrio parahaemolyticus
AQ3810]
Length = 2335
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
F T+ DSG D I + + + E +SI G E + +++ G +G+
Sbjct: 2145 FTLTLNDSGTD-------IAQTERHASVGDEFANSITGGESIDILLGQAGEDTLSGGAGD 2197
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+++G N++ G+D+ G G+DTF + S R + I + +E K D
Sbjct: 2198 DILVGGLGNDILTGGLGSDILTGGEGIDTFTFTQESLDMTSSR--DVIKDFRLDEDKLD- 2254
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
LSD+ F D D N+ + +Y ++ + L
Sbjct: 2255 LSDILEF-FGDDTTDMDNLLEHVSADYDSAQDTL 2287
>gi|3128477|gb|AAC31167.1| metalloproteinase [Arabidopsis thaliana]
Length = 341
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 27/112 (24%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETS--IHSDIK--FISSNNG-------------YV 89
L P V R A GEW+ V+ ++F ET + +DIK F + ++G +
Sbjct: 155 LAPTDIRVFRRAFGEWASVIPVSFIETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHT 214
Query: 90 CTPRYDSRYFMEINFDKADVWR--YGIGKGTI---LSHNALHEIGHALGLMH 136
+P ++ DKA+ W + K ++ L A+HEIGH LGL H
Sbjct: 215 FSPENG-----RLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGH 261
>gi|146386374|gb|ABQ23975.1| matrix metalloproteinase 10 [Oryctolagus cuniculus]
Length = 281
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFL 159
+++FD + W GT L A HE+GH+LGL H + YPVY
Sbjct: 13 DVHFDDDEKWTES-ASGTNLFLAAAHELGHSLGLFHSANPEALMYPVYNT---------F 62
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
T + + + QD D+ +Q +YG P S G ++ E
Sbjct: 63 TDLARFRLSQD----------------DVDGIQSLYGPPPTSPGTSVVPTE 97
>gi|163740316|ref|ZP_02147710.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
2.10]
gi|161386174|gb|EDQ10549.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
2.10]
Length = 937
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ +S GDD +L+GGV N + T+ + ++ G + + T+ + ++G + ND++
Sbjct: 344 TLNNSAGDD----SLVGGVGNDSIVATDGFDTLEGGDGDDTMYGGNDDDLLLGGADNDLM 399
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFF 308
G + N+ GNDV DG G DT
Sbjct: 400 YGETGNDSLDGGDGNDVMDGGVGNDTLM 427
>gi|159186153|ref|NP_356242.2| rhizobiocin/RTX toxin [Agrobacterium tumefaciens str. C58]
gi|159141287|gb|AAK89027.2| rhizobiocin/RTX toxin [Agrobacterium tumefaciens str. C58]
Length = 1937
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND + G S N+ +GNDV G SG DTF + S + F+ D E
Sbjct: 1825 GGDGNDEISGGSGNDTLSGGAGNDVLTGGSGADTFVFATGSGRDVVTDFQAGADGKDVVE 1884
Query: 333 HKQDFLSDVERL 344
++ +D L
Sbjct: 1885 LSKEVFADYRAL 1896
>gi|119494066|ref|ZP_01624618.1| hypothetical protein L8106_04231 [Lyngbya sp. PCC 8106]
gi|119452203|gb|EAW33405.1| hypothetical protein L8106_04231 [Lyngbya sp. PCC 8106]
Length = 298
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G N T+A + +S+ G GND++ GN ++V + + GND+ G G DT F
Sbjct: 120 GDAGNDTLAGGSGNDSLFGGEGNDLLEGNDGDDVLYGNQGNDLLQGDGGSDTMF 173
>gi|224079831|ref|XP_002193937.1| PREDICTED: matrix metallopeptidase 23B [Taeniopygia guttata]
Length = 384
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 8/44 (18%)
Query: 101 EINFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
EI+FD + W R+ KG L+ H A HEIGHALGLMH
Sbjct: 172 EIHFDDHEYWILGNTRFSWKKGVWLTDLVHVAAHEIGHALGLMH 215
>gi|163795703|ref|ZP_02189668.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
gi|159178999|gb|EDP63534.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
Length = 565
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----------DLTLIGGVKNYIDLNTES 249
G GN++ + +Q +Y GDD L GG N +
Sbjct: 300 GGAGNDLISFSGASVNVAGLQVVYGGDGDDTLFGSKNGTVNFTFAFFGGAGNDVLRGHTG 359
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G E N T++ ++++VG GND+++G S +V + GND G G DT
Sbjct: 360 NDLLSGGEGNDTLSGGEGLDTLVGGIGNDLLLGLSTGSVMYGGEGNDTLSGGDGTDTLSG 419
Query: 310 YAPSYL 315
A + L
Sbjct: 420 GAGNDL 425
>gi|257094275|ref|YP_003167916.1| outer membrane adhesin like protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046799|gb|ACV35987.1| outer membrane adhesin like proteiin [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 5854
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G D D L G + + + + G E N + + + + G +GND + G
Sbjct: 3050 NGNGDFRDNVLTGDATSRLLVGRAGNDVLAGSEGNDNLDGGSGADQLDGGAGNDALSGGD 3109
Query: 285 ANNVFFESSGNDVFDGSSGLD 305
++V F +GND+ DG G D
Sbjct: 3110 GDDVLFGGAGNDLLDGGRGAD 3130
Score = 37.0 bits (84), Expect = 9.7, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
ES+ GSS NDV+ G + ++ SSG+DV DG G D F
Sbjct: 2478 ESIYGSSRNDVIDGLAGSDWIEGSSGDDVLDGGVGADRLF 2517
>gi|326670156|ref|XP_692205.5| PREDICTED: stromelysin-3 [Danio rerio]
Length = 501
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 57/134 (42%), Gaps = 22/134 (16%)
Query: 58 ALGEWSKVVDLTFEET-SIHSDI-----KFISSNN------GYVCTPRYDSRYFME--IN 103
AL WS V LTF E + +DI ++ +N G + + R E I+
Sbjct: 142 ALKVWSDVTPLTFTEVVNQEADIVIDFTRYWHGDNLPFDGPGGILAHAFFPRTHREGDIH 201
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMH---PGS-----YNGGYPVYGVDNDYEN 155
FD + W G GT L A HE GH LGL H PG+ Y+ YP+ ++D +
Sbjct: 202 FDYDESWTVGNELGTDLLQVAAHEFGHVLGLQHSLVPGAIMSPFYSFSYPLKLSEDDKKG 261
Query: 156 DSFLTSVMSYFMPQ 169
+L PQ
Sbjct: 262 IQYLYGPPVRAQPQ 275
>gi|255264091|ref|ZP_05343433.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
gi|255106426|gb|EET49100.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
Length = 664
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI+ G+D +D GG N +I G N TI T +++ G SGND+V
Sbjct: 288 TIFGQQGNDTID----GGSGN---------DTIDGGSGNDTIQGGTGQDTIEGGSGNDIV 334
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF 307
G N+ SG D DG G DT
Sbjct: 335 DGGEGNDQISGGSGEDTIDGGQGQDTL 361
>gi|218438228|ref|YP_002376557.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
gi|218170956|gb|ACK69689.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
Length = 1400
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
D+ FG T +S + I G GN+ + DS F D+ +L D
Sbjct: 592 DSLFGGAGTDTISGNLGDDTIDGGE----GNDTINGN-EDNDSLFGGAGTDTISGNLGDD 646
Query: 234 TLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
T+ GG N I+ N ++ S GG + TI+ + +++ G GND + GN N+ F
Sbjct: 647 TIDGGEGNDTINGNEDNDSLFGGAGTD-TISGNLGDDTIDGGEGNDTINGNEDNDSLFGG 705
Query: 293 SGNDVFDGSSGLDTF 307
+GND DG G DT
Sbjct: 706 AGNDTIDGGEGNDTI 720
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G N TI + +++ G GND + GN N+ F +GND DG +G DT
Sbjct: 795 SINGGAGNDTIFGNLGNDTIDGGEGNDTINGNEDNDSLFGGAGNDSIDGGAGNDTINSND 854
Query: 312 PSY 314
P+
Sbjct: 855 PAV 857
>gi|148545445|ref|YP_001265547.1| hypothetical protein Pput_0188 [Pseudomonas putida F1]
gi|148509503|gb|ABQ76363.1| conserved repeat domain [Pseudomonas putida F1]
Length = 9030
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+++ G GND+++G + N+ G+D+ G SG DTF + A
Sbjct: 8889 DTLDGGKGNDILLGGTGNDTLIGGQGDDILIGGSGADTFVWKA 8931
>gi|307292909|ref|ZP_07572755.1| Cadherin [Sphingobium chlorophenolicum L-1]
gi|306880975|gb|EFN12191.1| Cadherin [Sphingobium chlorophenolicum L-1]
Length = 1431
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--GG 255
P S +N Y+++V DS G D +LT++ + L S S GG
Sbjct: 1222 PTDSNLDNRYQVQVLATDS--------LGAQDFQNLTIVVNNVKGVSLTAASGGSTLTGG 1273
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E+ +++ G+ GNDV+IGN ++ + GND DG +G D
Sbjct: 1274 MEE----------DTLKGAGGNDVLIGNGGADILTGNGGNDSIDGGAGAD 1313
>gi|241758766|ref|ZP_04756879.1| putative RTX toxins and related Ca2+-binding protein [Neisseria
flavescens SK114]
gi|241320974|gb|EER57187.1| putative RTX toxins and related Ca2+-binding protein [Neisseria
flavescens SK114]
Length = 569
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G++ ND+++G S N+V +GND+ G+SG D F + YR +N I+ D++
Sbjct: 274 GTNQNDILLGGSGNDVLIGGNGNDILAGNSGRDKLF---GGKGHDKYRADNLDIIRDSD 329
>gi|166365607|ref|YP_001657880.1| hypothetical protein MAE_28660 [Microcystis aeruginosa NIES-843]
gi|166087980|dbj|BAG02688.1| hypothetical protein MAE_28660 [Microcystis aeruginosa NIES-843]
Length = 308
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 200 GSLGNNIYKIEVQQK-DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ GN+IY S IQ +GG D LD T G + +N + +
Sbjct: 78 GANGNDIYCFNASTPLGSDTIQETT-TGGIDTLDFT---GTNTAVRVNLGTTAVQTAVTN 133
Query: 259 NM--TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N+ T + + IE+++ SGND + GNS NN GND G +G D
Sbjct: 134 NLKLTFSANNTIENIISDSGNDRLTGNSLNNTLTGGGGNDQLTGQNGND 182
>gi|288560323|ref|YP_003423809.1| glycosyl transferase GT4 family [Methanobrevibacter ruminantium M1]
gi|288543033|gb|ADC46917.1| glycosyl transferase GT4 family [Methanobrevibacter ruminantium M1]
Length = 1012
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 50/220 (22%)
Query: 378 DVFES----MKHFYEFGLSEGRDITFD----SYLYLGS--------YDDLRNVFGSDRGA 421
DV ES KH+ G+ E R FD SY + + Y + N+
Sbjct: 42 DVKESGMNPFKHYLLHGIDEERSTNFDENINSYSLVENSDLFDYEYYCEKNNLKFDSYSK 101
Query: 422 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLV---QVGKDHFS----NF 473
A HY+ G K+G NP F A EY D+ AD LV + GK + N
Sbjct: 102 ALMHYLEKGYKKGYNPSIKFNAEEYYEVRPDV--KRADVNPLVHYLKYGKIEVTSMTENL 159
Query: 474 GCEEGRFVT----FDSYLYL-GSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKAL 527
+E + V FD Y+ ++ DLRN A HY+ G K+G NP + F
Sbjct: 160 NLKEYQLVKNSNLFDYNYYMEKNHLDLRN-----ETEAIYHYLEIGYKKGYNPSNKFNGE 214
Query: 528 EYIASHEDLINAFADAPDLVQAGKD---HFSNFGYEEGRS 564
Y F PD+ ++G + H+ +G +E R+
Sbjct: 215 IY----------FKKNPDIEESGWNPLVHYLKYGQKEERT 244
>gi|163737275|ref|ZP_02144693.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161389879|gb|EDQ14230.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 937
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ +S GDD +L+GGV N + T+ + ++ G + + T+ + ++G + ND++
Sbjct: 344 TLNNSAGDD----SLVGGVGNDSIVATDGFDTLEGGDGDDTMYGGNDDDLLLGGADNDLM 399
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFF 308
G + N+ GNDV DG G DT
Sbjct: 400 YGETGNDSLDGGDGNDVMDGGVGNDTLM 427
>gi|158338174|ref|YP_001519351.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158308415|gb|ABW30032.1| hemolysin-type calcium-binding region protein, putative
[Acaryochloris marina MBIC11017]
Length = 1227
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--IYRF 321
Q IE++ GS NDV++GN+ NV + G+D G G DTF + P L + F
Sbjct: 1109 QLISIENLTGSENNDVLLGNAEVNVLVGNGGDDTLTGGLGADTFV-FGPEALGADVVTDF 1167
Query: 322 ENAIIVYD 329
++ + + D
Sbjct: 1168 QDGLDLLD 1175
>gi|260896121|ref|ZP_05904617.1| flagellin hook IN domain protein [Vibrio parahaemolyticus Peru-466]
gi|308088089|gb|EFO37784.1| flagellin hook IN domain protein [Vibrio parahaemolyticus Peru-466]
Length = 2539
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
F T+ DSG D I + + + E +SI G E + +++ G +G+
Sbjct: 2349 FTLTLNDSGTD-------IAQTERHASVGDEFANSITGGESIDILLGQAGEDTLSGGAGD 2401
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+++G N++ G+D+ G G+DTF + S R + I + +E K D
Sbjct: 2402 DILVGGLGNDILTGGLGSDILTGGEGIDTFTFTQESLDMTSSR--DVIKDFRLDEDKLD- 2458
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
LSD+ F D D N+ + +Y ++ + L
Sbjct: 2459 LSDILEF-FGDDTTDMDNLLEHVSADYDSAQDTL 2491
>gi|115615296|ref|XP_788786.2| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
gi|115961207|ref|XP_001187340.1| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
Length = 510
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 62/145 (42%), Gaps = 23/145 (15%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ--EVARWALGEWSKVVDL 68
E AD + R +Y R++ LT + L D +L P AQ + A WS V L
Sbjct: 94 ESFADMMRRKRY--ALGPRWRQTDLTWNILE-DSDDL-PRAQVESIMARAFKAWSDVSTL 149
Query: 69 TFEE-TSIHSDIK--FISSNNGYVCTPRYDS-------RYFMEIN-------FDKADVWR 111
TF + T+ DIK F + +G R+D YF N FD+ + +
Sbjct: 150 TFSKVTTNEPDIKIIFAAGEHGDGIEARFDGGGGVLAHAYFPTSNSIGGDAHFDEGERFT 209
Query: 112 YGIGKGTILSHNALHEIGHALGLMH 136
G G L A HE GH+LGL H
Sbjct: 210 EGTSTGINLFQVAAHEFGHSLGLRH 234
>gi|56708941|ref|YP_164986.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56680626|gb|AAV97291.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 1478
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+SIGG N TI+ +++ G G+DV+ G + ++ ++G D DG + DT
Sbjct: 540 NSIGGLAGNDTISGAGGNDTLSGGPGDDVLNGGAGDDSLRGNAGYDTVDGGADTDTVVVN 599
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
A S I + I + + +S+VE +RF D+ +
Sbjct: 600 ANSTDVNIIGSSDPITIQSPDGDV--VISNVEFVRFLDRTM 638
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G D + GN N+V GND +G +G D + Y I N I N
Sbjct: 201 NGTDYLYGNGGNDVLEGGGGNDSVNGGTGTDRAVFSGNCSDYTITSNANGTITIADNRAN 260
Query: 335 Q----DFLSDVERLRFAD 348
D L DVE RFAD
Sbjct: 261 SPDGTDTLKDVEYARFAD 278
>gi|329849530|ref|ZP_08264376.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
gi|328841441|gb|EGF91011.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
Length = 445
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+S+ G GND +IG + N+ NDV G SG D F +Y P
Sbjct: 333 DSINGGLGNDTLIGGTGNDTLLGQLDNDVLTGGSGADLFVFYKP 376
>gi|37222093|gb|AAP76489.1| LipB [uncultured bacterium]
Length = 617
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T+ +S+ G T+ H + + G GND ++G S N+VF +GND+ + G DT
Sbjct: 485 TQYEASVKGGAGADTLKAHAGGDWLFGLDGNDHLLGGSGNDVFVGGAGNDLMESGGGYDT 544
Query: 307 FFY 309
F +
Sbjct: 545 FLF 547
>gi|311255637|ref|XP_003126306.1| PREDICTED: matrix metalloproteinase-19-like [Sus scrofa]
Length = 540
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 40 LSFDITELNPNAQE-VARWALGE----WSKVVDLTFEET---------SIHSDIKFISSN 85
L+F I L VAR AL + WS V LTF E S H SN
Sbjct: 110 LTFRILNLPSTLPPYVARAALLQAFQYWSNVAPLTFREVKAGWADIRLSFHGRQSPYCSN 169
Query: 86 N----GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
N G V D ++FD+ ++W +G L A HE+GHALGL H
Sbjct: 170 NFDGPGRVLA-HADIPELGSVHFDEDELWTERSYRGVNLRIIAAHELGHALGLGH 223
>gi|126735754|ref|ZP_01751499.1| putative secreted calcium-binding protein [Roseobacter sp. CCS2]
gi|126714941|gb|EBA11807.1| putative secreted calcium-binding protein [Roseobacter sp. CCS2]
Length = 731
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-----------VVGSSGNDVVIG 282
T++GG + + + E I G TI +E + G GND + G
Sbjct: 566 TMVGGAGSDVIVGQEGDDMIDGGSGRSTITSSDRLEDFDQVGGQNGDFLFGGEGNDQIHG 625
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFY 309
NS N++ F GND G G DTF +
Sbjct: 626 NSGNDLLFGGEGNDQLWGGGGFDTFVF 652
>gi|332267293|ref|XP_003282617.1| PREDICTED: matrix metalloproteinase-23-like, partial [Nomascus
leucogenys]
Length = 280
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 127 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 169
>gi|209528126|ref|ZP_03276601.1| hypothetical protein AmaxDRAFT_5427 [Arthrospira maxima CS-328]
gi|209491448|gb|EDZ91828.1| hypothetical protein AmaxDRAFT_5427 [Arthrospira maxima CS-328]
Length = 218
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N T+ H+ +++ G GND++IG S NN+ G D G G++ F S
Sbjct: 45 GNQGNDTLIGHSGNDTIYGGQGNDLIIGGSGNNILSGDRGLDTLTGGDGINEFILSQSS 103
>gi|328783162|ref|XP_001120736.2| PREDICTED: matrix metalloproteinase-25-like [Apis mellifera]
Length = 419
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 71/232 (30%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRY-----KPDVLTTHRLSFDITELNPNAQEVARW 57
+ P YT R + + Q W + + + +P L T + F+++
Sbjct: 94 KVDPRYTRVRHKRYTIHGQQWPHRNLTWSLRTEQPSGLDTGGVRFELSR----------- 142
Query: 58 ALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCT--PRYDSR-------YFM------E 101
AL W++ LTF+E S +DI + + GY P +D R +F +
Sbjct: 143 ALDLWARNSKLTFQEVNSDRADI-LVYFHRGYHGDGYP-FDGRGQILAHAFFPGRDRGGD 200
Query: 102 INFDKADVWRY---GIGKGTILSHNALHEIGHALGLMH---PGSYNGGYPVY-GVDNDYE 154
++FD+ ++W +GT L A HE GH+LGL H PG+ YP Y G+ ++YE
Sbjct: 201 VHFDEEEIWLLQGDNNEEGTSLFAVAAHEFGHSLGLAHSSVPGALM--YPWYQGLSSNYE 258
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+P+D D +Q++YGAP+ L N+
Sbjct: 259 ------------LPED----------------DRHGIQQMYGAPEERLWANL 282
>gi|291567841|dbj|BAI90113.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 558
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 20/132 (15%)
Query: 188 IVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDL 245
+ + + P +G+ GN++ + +P TIY G+D TLIGG N ++D
Sbjct: 306 VAPTEPLEAEPIRGTRGNDLLR------GTPGNDTIYGLAGND----TLIGGKGNDFLDG 355
Query: 246 NTESWSSIGGYEKNMTIAQH--------TVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ +GG + I +S+VG G D +IG N+ +G D+
Sbjct: 356 GPGNDRLLGGAGHDTLIGGKGNDFLDGGPGNDSLVGGPGRDTLIGGKGNDTLNGGAGQDI 415
Query: 298 FDGSSGLDTFFY 309
G G D F +
Sbjct: 416 LTGGPGADIFVF 427
>gi|47227660|emb|CAG09657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 401
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 21/129 (16%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS---DIKF---------- 81
LT + F + V R AL WS V LTF T IHS DI+
Sbjct: 37 LTYRIVRFPWQMSEEKVRRVFREALKIWSDVTPLTF--TEIHSGKADIRIDFTRYWHGDN 94
Query: 82 --ISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-- 136
G + + + +I+FD + W G GT L A HE GH LGL H
Sbjct: 95 LPFDGPGGILAHAFFPKTHRQGDIHFDYDESWTLGNHMGTDLLQVAAHEFGHVLGLQHSR 154
Query: 137 -PGSYNGGY 144
PG+ Y
Sbjct: 155 EPGAIMSAY 163
>gi|72383812|ref|YP_293166.1| VCBS [Ralstonia eutropha JMP134]
gi|72123155|gb|AAZ65309.1| VCBS [Ralstonia eutropha JMP134]
Length = 1883
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ GS+GNDV+ G + N+ GND+ G +G DT A S + R + A +
Sbjct: 1738 DTLTGSTGNDVLRGGAGNDTLLGGDGNDMLIGGAGADTLTGGAGSDTFAFLRADAASV 1795
>gi|239813783|ref|YP_002942693.1| glycosyl transferase family 2 [Variovorax paradoxus S110]
gi|239800360|gb|ACS17427.1| glycosyl transferase family 2 [Variovorax paradoxus S110]
Length = 1476
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL +Y D+ + G+D A HY+THG EGR P F EY A + D A
Sbjct: 446 FDREWYLKTYPDVASA-GTD---PAEHYVTHGAAEGRQPGPWFSGTEYAARYGD---AAG 498
Query: 458 DAPDLVQVGKDHFSNFGCEEGR 479
P + H++ G EGR
Sbjct: 499 FNPLI------HYTLVGAREGR 514
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
FD YL +Y D+ + G+D A HY+THG EGR P F EY A + D
Sbjct: 446 FDREWYLKTYPDVASA-GTD---PAEHYVTHGAAEGRQPGPWFSGTEYAARYGD 495
>gi|300864914|ref|ZP_07109758.1| hypothetical protein OSCI_1150008 [Oscillatoria sp. PCC 6506]
gi|300337085|emb|CBN54908.1| hypothetical protein OSCI_1150008 [Oscillatoria sp. PCC 6506]
Length = 1995
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G GND ++G++ ++ + G+D G +G D F PS + A ++ D
Sbjct: 1886 VCGGIGNDTLLGDNGDDTLYGGDGDDSLTGGAGND-VFVLTPS--------QGAGVITDF 1936
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQ--RSILEYTASYEDLIQVIG 376
QDFL ++ L FAD I + ++ +I+ TAS + L+ + G
Sbjct: 1937 -MVGQDFLKLIDNLSFADLTITPGSGERVGDTIIRVTASNQLLVSLTG 1983
>gi|254430946|ref|ZP_05044649.1| structural toxin protein RtxA [Cyanobium sp. PCC 7001]
gi|197625399|gb|EDY37958.1| structural toxin protein RtxA [Cyanobium sp. PCC 7001]
Length = 2003
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+VG GNDV+ G+ ++V +G+D G SG DTF Y
Sbjct: 1368 LVGLGGNDVLRGDGGDDVLVGGTGSDTLTGGSGRDTFMY 1406
>gi|300867244|ref|ZP_07111904.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Oscillatoria
sp. PCC 6506]
gi|300334721|emb|CBN57070.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Oscillatoria
sp. PCC 6506]
Length = 445
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Query: 221 TIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T+ GGDD L D +L GGV N I + G + N ++ + + G
Sbjct: 269 TLSGEGGDDYLRGGKDDDSLSGGVGNDI---------LSGNQANDSLDGGAGDDFLRGGR 319
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GNDV+ G N++ GND G G DTF L + + I+ ++ E +
Sbjct: 320 GNDVLTGGDGNDILIGDLGNDTLTGGGGADTFVLILGEGL-TLDTTTDRILDFNPGEGDR 378
Query: 336 -DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ RL F D ++++++ S ++Q + + +S
Sbjct: 379 IGVTGNLSRLTFTQSGSD-------TLIQFSGSTLGIVQNVASGIVQS 419
>gi|296236895|ref|XP_002807973.1| PREDICTED: LOW QUALITY PROTEIN: stromelysin-3-like [Callithrix
jacchus]
Length = 591
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFISSNN-- 86
LT L F + ++ AL WS V LTF E H+DI ++ +N
Sbjct: 213 LTYRILRFPWQLVQEQVRQTMAEALRVWSDVTPLTFTEVHEGHADIMIDFARYWHGDNLP 272
Query: 87 ----GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
G + + + E ++FD + W G +GT L A HE GH LGL H
Sbjct: 273 FDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQH 328
>gi|302875268|ref|YP_003843901.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|307688118|ref|ZP_07630564.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|302578125|gb|ADL52137.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
Length = 304
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE-----YI 530
+E + F YL Y D+ G D +HY+++G KEGR P K + Y+
Sbjct: 161 DEMKIRIFSRTWYLAQYPDVLKS-GLD---PYQHYLSYGKKEGRQPLPPKPKDFTDAGYL 216
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ D+++A + +G DH+ FG+ EGR +
Sbjct: 217 ICNTDVVDAINRGEYV--SGLDHYYEFGWREGRKWNY 251
>gi|225452584|ref|XP_002275582.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296087730|emb|CBI34986.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 21/96 (21%)
Query: 58 ALGEWSKVVDLTFEETS--------------IHSDIKFISSNNGYVC--TPRYDSRYFME 101
A G W+ + TFE+TS H D G + P D R+
Sbjct: 178 AFGAWAAISKFTFEQTSDPTVANLNISFQIREHGDGSPFDGPGGTIAHAAPPTDGRF--- 234
Query: 102 INFDKADVWRYGIGKGTI-LSHNALHEIGHALGLMH 136
+FD + W G +I L A HEIGH LGL H
Sbjct: 235 -HFDGDETWVVGAVANSIDLQTVATHEIGHLLGLAH 269
>gi|290343622|ref|YP_003494989.1| hypothetical protein OTV1_150 [Ostreococcus tauri virus 1]
gi|260161037|emb|CAY39738.1| hypothetical protein OTV1_150 [Ostreococcus tauri virus 1]
Length = 174
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSD 418
Y Y D G D+ ++ KH+YE G+++ RD + Y+ Y DL+ FG+D
Sbjct: 84 YLDRYPDAKTYAGTDLKKARKHYYETGMAQNRDFACGLSVKELQCYVERYPDLQTAFGTD 143
Query: 419 RGA---------AARHYITHGVKEGRN 436
A A H+ T+G E R+
Sbjct: 144 YAARGTDKTLYKAGVHWDTYGKGEDRD 170
>gi|116754892|ref|YP_844010.1| Cna B domain-containing protein [Methanosaeta thermophila PT]
gi|116666343|gb|ABK15370.1| Cna B domain protein [Methanosaeta thermophila PT]
Length = 2656
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 542 DAPDLVQAGKDHFSNF-GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
D+P L++ G+D F + +E GRS N D+YLT +D WN S R AA +Y
Sbjct: 2382 DSPALLKVGEDFFLAYQSWEGGRS--SNGDVYLTRFDSTWNPIRSVRLAADSYY 2433
>gi|114640083|ref|XP_001153208.1| PREDICTED: matrix metalloproteinase-20 [Pan troglodytes]
Length = 483
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 75/207 (36%), Gaps = 51/207 (24%)
Query: 40 LSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEE-TSIHSDIKFISSNNG------ 87
L++ I++ P+ V AL WS V L+F S +DI IS NG
Sbjct: 122 LTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINSGEADI-MISFENGDHGDSY 180
Query: 88 YVCTPRYDSRYFM--------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
PR + + +FD A+ W G G L A HE GHALGL H
Sbjct: 181 PFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAHEFGHALGLAHSTD 239
Query: 140 YNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ YP Y N Y + +P+D D+ +Q +YG
Sbjct: 240 PSALMYPTYKYKNPY----------GFHLPKD----------------DVKGIQALYGPR 273
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDS 225
K LG K P I + DS
Sbjct: 274 KAFLGKPTLPHAPHHK--PSIPDLCDS 298
>gi|17228898|ref|NP_485446.1| hypothetical protein alr1403 [Nostoc sp. PCC 7120]
gi|17130750|dbj|BAB73360.1| alr1403 [Nostoc sp. PCC 7120]
Length = 556
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVYD 329
+ G +GND + G++ N+ +GND G +G+DT Y Y I N + V D
Sbjct: 340 ITGGTGNDTLDGSTGNDTLIGGAGNDTLIGGAGVDTAVYAGNYADYGISFLSNGDLQVID 399
Query: 330 AN----EHKQDFLSDVERLRF 346
N D L VE + F
Sbjct: 400 KNLTNGNDGTDILKGVEVINF 420
>gi|257095236|ref|YP_003168877.1| Hemolysin-type calcium-binding domain-containing protein
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257047760|gb|ACV36948.1| Hemolysin-type calcium binding domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 3662
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N TIA T +V G++ ++V++GN+ N+ GND DG G+DT + Y
Sbjct: 833 ENATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGNDTLDGGLGIDTLVGGLGNDFYA 892
Query: 318 IYRFENAI 325
I + +
Sbjct: 893 IDTLADVV 900
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N TIA T +V G++ ++V++GN+ N+ GND DG G+DT + Y
Sbjct: 1882 ENATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGNDTLDGGLGIDTLVGGLGNDFYA 1941
Query: 318 IYRFENAI 325
I + +
Sbjct: 1942 IDTLADVV 1949
>gi|221112764|ref|XP_002163814.1| PREDICTED: similar to matrix metalloproteinase [Hydra
magnipapillata]
Length = 316
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS-------RYFM--- 100
++ R A WS V L F ETS DI +N + +D YF
Sbjct: 111 VRQTIREAFKVWSDVTHLAFTETSGKGDITIGFHHNSHGDNSPFDGPGRVLAHAYFPPEG 170
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ FD+ + W GT L A+HEIGH LGL H
Sbjct: 171 RLCFDEGERWVIKT-TGTDLFEIAIHEIGHILGLEH 205
>gi|297690058|ref|XP_002822444.1| PREDICTED: matrix metalloproteinase-20-like [Pongo abelii]
Length = 483
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 71/198 (35%), Gaps = 49/198 (24%)
Query: 40 LSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEE-TSIHSDIKFISSNNG------ 87
L++ I++ P+ V AL WS V L+F S +DI IS NG
Sbjct: 122 LTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINSGEADI-MISFENGDHGDSY 180
Query: 88 YVCTPRYDSRYFM--------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
PR + + +FD A+ W G G L A HE GHALGL H
Sbjct: 181 PFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAHEFGHALGLAHSTD 239
Query: 140 YNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ YP Y N Y + +P+D D+ +Q +YG
Sbjct: 240 PSALMYPTYKYQNPY----------GFHLPKD----------------DVKGIQALYGPR 273
Query: 199 KGSLGNNIYKIEVQQKDS 216
K LG K S
Sbjct: 274 KAFLGKPTLPHAPHHKPS 291
>gi|269963802|ref|ZP_06178117.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831464|gb|EEZ85608.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 1919
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G++G+D+++G N++ GND+ G G DTF + S ++ + I
Sbjct: 1772 VDTFNGAAGDDILVGGLGNDILIGGLGNDILTGGEGSDTFTFTNESLSSEVSM--DVIKD 1829
Query: 328 YDANEHKQDFLSDV-----ERLRFADQCIDSVNVK---QRSILEYTASYEDLIQVIGQDV 379
++ E K D LSD+ + + + +D V+ ++ L T + E GQ
Sbjct: 1830 FNLGEDKLD-LSDIVSSADDDVAAMEALLDHVSASFDGEQDTLNLTITNE-----TGQST 1883
Query: 380 FESMKHFYEFGLSEGRDIT 398
+++HF GL G T
Sbjct: 1884 SVALEHFDMSGLELGASAT 1902
>gi|33866882|ref|NP_898441.1| hypothetical protein SYNW2352 [Synechococcus sp. WH 8102]
gi|33639483|emb|CAE08867.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 628
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
RY + A HE GHALGL HP + G +D + +VMSY QD
Sbjct: 397 RYAGSREAGWKSTAFHEFGHALGLEHPHDDSDGDVDADIDTN-------GTVMSYVKEQD 449
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D GY DI A+Q +YG+ G
Sbjct: 450 A--DGDPGYTDL----DIRALQFVYGSESG 473
>gi|84501008|ref|ZP_00999243.1| type I secretion target repeat protein [Oceanicola batsensis
HTCC2597]
gi|84391075|gb|EAQ03493.1| type I secretion target repeat protein [Oceanicola batsensis
HTCC2597]
Length = 1210
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 221 TIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T++ GDDL+ D +L+GG N + ++ G+ + T+ + + G
Sbjct: 1025 TLHGGDGDDLINGHGGDDSLVGGRGNDDMRGSPGNDTLRGWGGDDTLRGFNDDDLLTGQH 1084
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G+DV++GN N++ + GND +G G DT
Sbjct: 1085 GDDVLVGNRGNDLLLGNEGNDSLNGGIGHDTLI 1117
>gi|113476200|ref|YP_722261.1| cadherin [Trichodesmium erythraeum IMS101]
gi|110167248|gb|ABG51788.1| Cadherin [Trichodesmium erythraeum IMS101]
Length = 2145
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 17/134 (12%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI GDD +L GG N + L E +I G +N T+ + + G GND V
Sbjct: 440 TIDGGTGDD----SLSGGKDNDLLLGGEGRDTINGERQNDTVDGMEENDFLSGGKGNDSV 495
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFF---YYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G +++ G+D G G D+F + LY + F A +D
Sbjct: 496 DGGQGDDLLIGGRGDDTLTGGEGQDSFVIIDFEESDNLYTVTDFNTA----------EDL 545
Query: 338 LSDVERLRFADQCI 351
+S LRF D I
Sbjct: 546 ISLEGGLRFEDLAI 559
>gi|332807452|ref|XP_001155083.2| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-23 [Pan
troglodytes]
Length = 315
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 104 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 146
>gi|209549795|ref|YP_002281712.1| cadherin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535551|gb|ACI55486.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 928
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D G N+ F +GND G +G+DT +A ++ + N + + +
Sbjct: 635 GDDYFFGTDGNDRFEGGAGNDALLGGAGIDT-AVFAGNFANYTFGMNNGDHILTSAKEGT 693
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L D+E RFAD D K ++ A+ + IQ+ + ES + GL +
Sbjct: 694 DTLRDIEIARFADGVYDF--AKGTFTADHNAAPTN-IQLSQTSLLESTPIWTTLGLLSAK 750
Query: 396 DITFDSYLY 404
D D Y
Sbjct: 751 DADGDPLTY 759
>gi|332710198|ref|ZP_08430150.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332351037|gb|EGJ30625.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 847
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + + V + +G G+D +G + N+ F +S G + FDG G DT ++ + ++
Sbjct: 259 NDELTGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDGGEGRDTVDFFEFDFGVQV 318
Query: 319 YRFENAIIVYDANEHK--QDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
E I D+N+ + Q +S +V F D+ I N + + L Y + + I
Sbjct: 319 NIVEGTAISTDSNDQEIIQTLISIENVLGTNFDDELIG--NGQGNTFLGYNGN-DKFIGG 375
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
G DVF F EG D
Sbjct: 376 AGNDVFRDSAGVNYFDGGEGLD 397
>gi|294085806|ref|YP_003552566.1| metalloprotease [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665381|gb|ADE40482.1| metalloprotease, putative [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 971
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 12/78 (15%)
Query: 124 ALHEIGHALGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+HEIGH +GL HP NG + + E+D +++MSY P+ + + T
Sbjct: 585 PVHEIGHMMGLRHPFDSNGQRQTSWPARPELESD--FSTIMSY-SPKTNWV------GLT 635
Query: 183 PMVSDIVAVQKIYGAPKG 200
P +DI +Q +YGAP+G
Sbjct: 636 P--ADIAVLQFLYGAPQG 651
>gi|3660676|gb|AAC62618.1| metalloprotease mmp21/22C [Homo sapiens]
Length = 249
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 31 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 73
>gi|332708027|ref|ZP_08428023.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332353209|gb|EGJ32753.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 397
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G+ GND + G + +++ GND+ G+ G+DT+ ++ FE+ I
Sbjct: 286 DTLIGAEGNDSLFGGNGDDILEGGLGNDILSGAGGIDTYVLNPGEGTDTVFSFEDGI--- 342
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
D+ +L D D + + TA+ E L QV G
Sbjct: 343 -----------DMFKLG-GDLTFDQLAIADMGATTITANGEVLAQVFG 378
>gi|113476758|ref|YP_722819.1| G-D-S-L family lipolytic protein [Trichodesmium erythraeum IMS101]
gi|110167806|gb|ABG52346.1| lipolytic enzyme, G-D-S-L [Trichodesmium erythraeum IMS101]
Length = 418
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 509 HYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SI 565
H+ G E R+P F Y+ ++ + A + +HF NFG E R S
Sbjct: 36 HFTRFGQFEDRDPSRIFNTNFYLTTNPGVATAVEQN---ILTPTEHFINFGQFEQRDPSA 92
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
N YL Y DL V + A +H++ G EGR
Sbjct: 93 LLNTSFYLERYPDLAEVVVNTPLTATEHFLNFGQFEGR 130
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 18/201 (8%)
Query: 425 HYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FV 481
H+ G E R+P F Y+ ++ + A + +HF NFG E R
Sbjct: 36 HFTRFGQFEDRDPSRIFNTNFYLTTNPGVATAVEQN---ILTPTEHFINFGQFEQRDPSA 92
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLINA 539
++ YL Y DL V + A H++ G EGR P + Y+ S D N
Sbjct: 93 LLNTSFYLERYPDLAEVVVNTPLTATEHFLNFGQFEGRLPRLLFSDIYVFGDSLSDTGNL 152
Query: 540 FADAPDLVQAGKDHFSNF--GYEEGRSI-------TFNPDLYLTSYDDLWNVFGSDRSAA 590
A A + + A + F Y EGR T P L LTS +L N S +
Sbjct: 153 LAAAENFLGATDEFVLEFFAPYFEGRLSNGPVWVETLAPQLELTSDPNL-NFAVSGATTG 211
Query: 591 AQHYITHGMKEGRALGISGMQ 611
+ + + EG G+Q
Sbjct: 212 ISNNGNNRLPEGTPPIFIGLQ 232
>gi|284051791|ref|ZP_06382001.1| Phosphatidylcholine--sterol O-acyltransferase [Arthrospira
platensis str. Paraca]
Length = 475
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIE-------VQQKDSPFIQTIYDSGGDDLLDLTLI 236
M+SDI+ Q G+ GN++ I + SP + I GDD
Sbjct: 1 MLSDII-TQNRLDLGLGTSGNDVIIISELPPEQLTRFSSSPLTEAIALLEGDD------- 52
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
YI + + G + N T+ H+ +++ G GND++IG S NN+ G D
Sbjct: 53 -----YIINDDPQGRILLGNQGNDTLIGHSGNDTIYGGEGNDLIIGGSGNNILSGDRGLD 107
Query: 297 VFDGSSGLDTFF 308
G G++ F
Sbjct: 108 TLTGGDGINEFI 119
>gi|3645920|gb|AAC63529.1| metalloprotease isoform C [Homo sapiens]
Length = 250
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 102 INFDKADVW-----RYGIGKGTILS---HNALHEIGHALGLMH 136
I+FD ++ W RY KG L+ H A HEIGHALGLMH
Sbjct: 31 IHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMH 73
>gi|329848974|ref|ZP_08264002.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844037|gb|EGF93606.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 773
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T S+S G Y + +T+ I + S GN + GNS NN+ GND G G D
Sbjct: 634 TVSYSLAGRYAETITLTGAANINATGNSLGN-TLNGNSGNNLINGKGGNDNLSGGLGADI 692
Query: 307 FFYYAPSYLYKIYRFENA 324
F + A S + KI+ F A
Sbjct: 693 FLFEAGSGVDKIHDFSAA 710
>gi|7107462|gb|AAF36415.1| rhizobiocin RzcA [Rhizobium leguminosarum bv. trifolii]
Length = 4163
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G +GNDV+ GN N++ SG+D G SG D F + A
Sbjct: 4050 GGAGNDVISGNDGNDILIGGSGDDTLTGGSGNDAFVFRA 4088
>gi|291568011|dbj|BAI90283.1| putative esterase [Arthrospira platensis NIES-39]
Length = 482
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 20/137 (14%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIE-------VQQKDSPFIQTIYDSGGDDLLDLTLI 236
M+SDI+ Q G+ GN++ I + SP + I GDD
Sbjct: 8 MLSDII-TQNRLDLGLGTSGNDVIIISELPPEQLTRFSSSPLTEAIALLEGDD------- 59
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
YI + + G + N T+ H+ +++ G GND++IG S NN+ G D
Sbjct: 60 -----YIINDDPQGRILLGNQGNDTLIGHSGNDTIYGGEGNDLIIGGSGNNILSGDRGLD 114
Query: 297 VFDGSSGLDTFFYYAPS 313
G G++ F S
Sbjct: 115 TLTGGDGINEFILSQSS 131
>gi|221369544|ref|YP_002520640.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
KD131]
gi|221162596|gb|ACM03567.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
KD131]
Length = 2626
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 221 TIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D+ D + GGV ++L + + + G ++ + + IE V+GSS ND+
Sbjct: 2247 TLLGGEGNDIADYSAATGGVT--VNLARDGLAQVIGADQGIDVLSS--IEGVIGSSSNDI 2302
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ G++ N+ F G D+ G++G DT A S
Sbjct: 2303 LSGSAVANLIFGGDGADLITGAAGNDTILGGAGS 2336
>gi|9082310|gb|AAF82802.1|AF277294_1 matrix metalloproteinase-like protein [Gnathostoma spinigerum]
Length = 244
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 44/171 (25%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP------------RYDSRYFMEINFD 105
ALG W+KV+ LTFE T+ D++F + G+ P RY ++D
Sbjct: 77 ALGTWTKVLPLTFEFTTGKGDLEFRFGSGGHFGCPWPFDGPGNLLAHAQPPRYGAFTHYD 136
Query: 106 KADV---W-RYGIGKGTI-----LSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDYEN 155
++ W + I G L +HE+GH LGL H P + YP+Y
Sbjct: 137 DDELFGEWTQQYIDNGRRPFMWDLRSLVIHEVGHYLGLGHSPDRDDIMYPMY-------- 188
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
D + D F A P +D+ Q+I+GA G +
Sbjct: 189 -------------SDPIKDGKF-VPAKPSKNDVYVAQQIHGARNGRYAREV 225
>gi|91976041|ref|YP_568700.1| RTX toxins and related Ca2+-binding proteins-like [Rhodopseudomonas
palustris BisB5]
gi|91682497|gb|ABE38799.1| RTX toxins and related Ca2+-binding proteins-like [Rhodopseudomonas
palustris BisB5]
Length = 769
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G E + TI+ + +V SGND+V + N++ F GNDV G +G D F
Sbjct: 327 NIDGREGSDTISGGEGHDHIVAGSGNDIVYAGAGNDIVFAGPGNDVVFGGAGNDRLF 383
>gi|316965930|gb|EFV50566.1| matrix metalloproteinase-20 [Trichinella spiralis]
Length = 293
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPV 146
++FD A+ W + G L A+HEIGH LGL H YN +P+
Sbjct: 203 LHFDAAEHWTLHMDNGINLFQTAVHEIGHLLGLEHSTDYNAVMFPI 248
>gi|316935446|ref|YP_004110428.1| 5'-nucleotidase domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603160|gb|ADU45695.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris DX-1]
Length = 2775
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYD-A 330
G + ND + GN +++ +G+D DG +G DT Y Y + ++IV D A
Sbjct: 2312 GGADNDTLFGNDGDDLIRGGAGDDTIDGGAGADTATYAGNFAGYATSLNTDGSLIVPDQA 2371
Query: 331 NEHKQDFLSDVERLRFADQC 350
D LS++E+L F D
Sbjct: 2372 GTDGADKLSNIEQLVFTDGA 2391
>gi|67924501|ref|ZP_00517922.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
gi|67853648|gb|EAM48986.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
Length = 287
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D + G + N+ F+ S G+D+F+G +G DT Y S L + I+
Sbjct: 83 GDGGDDTISGGNGNDTFYGSEGDDIFEGEAGKDTVNY---SSLGQSITLLPTGIIQKGGG 139
Query: 333 HKQDFLSDVERL 344
D L +VER+
Sbjct: 140 FGTDTLVEVERI 151
>gi|221125872|ref|XP_002165203.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 306
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS-------RYFM--- 100
++ R A WS V L F ETS DI +N + +D YF
Sbjct: 111 VRQTIREAFKVWSDVTHLAFTETSGKGDITIGFHHNSHGDNSPFDGPGRVLAHAYFPPEG 170
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ FD+ + W GT L A+HEIGH LGL H
Sbjct: 171 RLCFDEGERWVIKT-TGTDLFEIAVHEIGHILGLEH 205
>gi|170724217|ref|YP_001751905.1| Na-Ca exchanger/integrin-beta4 [Pseudomonas putida W619]
gi|169762220|gb|ACA75536.1| Na-Ca exchanger/integrin-beta4 [Pseudomonas putida W619]
Length = 5962
Score = 38.1 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+++ G GND+++G + N+ GND+ G SG DTF +
Sbjct: 5823 DTLDGGKGNDMLLGGTGNDTLIGGQGNDMLIGGSGADTFVW 5863
>gi|300705400|ref|YP_003747003.1| calcium binding hemolysin protein (modular protein) [Ralstonia
solanacearum CFBP2957]
gi|299073064|emb|CBJ44421.1| Putative calcium binding hemolysin protein (modular protein)
[Ralstonia solanacearum CFBP2957]
Length = 2266
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S++G +GND + G S N+ SGND G G DT Y++K ++ I Y
Sbjct: 2107 DSLLGGAGNDTLYGGSGNDTLEGGSGNDYLSGEGGSDT-------YVFKSSWGQDTINNY 2159
Query: 329 DANEHKQDFLS 339
D + D ++
Sbjct: 2160 DTTSSRSDVIA 2170
>gi|126343245|ref|XP_001378076.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 528
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKFISSNNG 87
R++ LT L++ T A+ A WS+V +L+F E +DI+ +S +
Sbjct: 105 RWRKRHLTFRILNWPSTLPVHTARTALLTAFRYWSRVANLSFREVQAGWADIR-LSFHGK 163
Query: 88 YV--CTPRYDSR----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
Y C+ +D ++FD+++ W G L A HE+GHALGL
Sbjct: 164 YSAYCSKGFDGPGNVLAHADIPELGSVHFDESETWTEATKMGVNLRIIAAHELGHALGLG 223
Query: 136 H 136
H
Sbjct: 224 H 224
>gi|224097718|ref|XP_002311052.1| predicted protein [Populus trichocarpa]
gi|222850872|gb|EEE88419.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--------------HSDIKFISSNNGYV--CTPR 93
N + + A W++V + TF+E S+ H+D K G + TP
Sbjct: 170 NIRSICAKAFRRWAQVTEFTFQEVSVSSPADIVIGFHRGDHNDGKAFDGPQGVLAHATPP 229
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTI-LSHNALHEIGHALGLMH 136
F +FD + W G + L A+HEIGH LGL H
Sbjct: 230 ASDAIF---HFDADENWSENPGPNQMDLESVAVHEIGHLLGLDH 270
>gi|237747941|ref|ZP_04578421.1| predicted protein [Oxalobacter formigenes OXCC13]
gi|229379303|gb|EEO29394.1| predicted protein [Oxalobacter formigenes OXCC13]
Length = 1843
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-----IYRFEN 323
+++VG GND++ G S N+ G+++ G SG DTF Y A K I F
Sbjct: 1681 DTLVGGDGNDILFGGSGNDTLIGGHGDNILTGGSGNDTFKYNAGDLEGKTHGDSITDFHV 1740
Query: 324 AIIVYDANE---HKQDFLSDVERL 344
+ D N +D L+ ++L
Sbjct: 1741 GDVAKDGNADILDLKDLLTGADKL 1764
>gi|157278088|ref|NP_001098144.1| stromelysin-3 [Oryzias latipes]
gi|19071862|dbj|BAB85675.1| stromelysin-3 [Oryzias latipes]
Length = 492
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 22/146 (15%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDI-----KFI 82
R++ L+ + F +++ R A G WS+V L F E T +DI ++
Sbjct: 122 RWEKTDLSYKIMRFPWQMREEKVRDIFREAFGVWSEVTPLRFREVTDGKADITIDFNRYW 181
Query: 83 SSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N G + + R E ++FD + W G GT L A HE GH LGL
Sbjct: 182 HGDNLPFDGPGGILAHAFFPRTHREGEVHFDFDEHWTVGNSVGTDLLQVAAHEFGHVLGL 241
Query: 135 MH---PGS-----YNGGYPVYGVDND 152
H P + Y+ YP+ D+D
Sbjct: 242 QHSQDPDAVMCPFYSDSYPLQLSDDD 267
>gi|78189851|ref|YP_380189.1| hypothetical protein Cag_1896 [Chlorobium chlorochromatii CaD3]
gi|78172050|gb|ABB29146.1| hypothetical protein Cag_1896 [Chlorobium chlorochromatii CaD3]
Length = 574
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFF 308
K++TI + + GND++ G + N+ F +GND + DG +G D F
Sbjct: 462 KSVTIVAGDGNQELRSEGGNDLLFGGNGNDRLFAGAGNDELCGGNGDNLLDGGAGSDVAF 521
Query: 309 YYAPSYLYKIYR--FENAIIVYDA--NEHKQDFLSDVERLRFADQC 350
+ Y++ N V D+ N + L ++E+LRFAD+
Sbjct: 522 FSGNVAEYRMTHNAATNMTSVVDSIPNRDGSNQLINIEQLRFADRT 567
>gi|224077434|ref|XP_002187137.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
(predicted) [Taeniopygia guttata]
Length = 596
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 80/215 (37%), Gaps = 61/215 (28%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
+ R + L Q W I Y + H + + E++ + R A W +V LT
Sbjct: 101 SRRKKRYALTGQKWRQRHITY-----SVHNYTPKVGEID--TRRAIRQAFDVWQRVTPLT 153
Query: 70 FEETSIH--------SDIKFISSNNGYVCTPRYDSR-------YFM------EINFDKAD 108
FEE H +DI ++ + + +D YF + +FD +
Sbjct: 154 FEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDE 213
Query: 109 VWRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVM 163
W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 214 PWTLGNSNHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK--------- 264
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+PQD D+ +QKIYG P
Sbjct: 265 ---LPQD----------------DLQGIQKIYGPP 280
>gi|220926123|ref|YP_002501425.1| family 2 glycosyl transferase [Methylobacterium nodulans ORS 2060]
gi|219950730|gb|ACL61122.1| glycosyl transferase family 2 [Methylobacterium nodulans ORS 2060]
Length = 872
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 23/125 (18%)
Query: 460 PDLVQVGKD---HFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
PD+ + G H+ +G +E R F S YL +Y D+ + HY+ G
Sbjct: 140 PDVAEAGVHPLLHYLKYGWKEYRDPNPYFHSEWYLKAYSDVAHA----NINPLVHYVMSG 195
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD---HFSNFGYEEGRS--ITFNP 569
+ EGR P L Y A APD+ + + H+ +G EGRS FNP
Sbjct: 196 IHEGRQPHYLFDLSYY---------LAGAPDVAGSKMNPWLHYITYGDREGRSGHPLFNP 246
Query: 570 DLYLT 574
D Y
Sbjct: 247 DYYCA 251
>gi|126729474|ref|ZP_01745288.1| type I secretion target repeat protein [Sagittula stellata E-37]
gi|126710464|gb|EBA09516.1| type I secretion target repeat protein [Sagittula stellata E-37]
Length = 907
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ + V+ IYG + + I+ +VQ + P Q GDD +L GG N
Sbjct: 374 IAGPVTTVEIIYGNLQSNT-QGIWVTDVQFEAVPIAQ------GDD----SLSGGTGN-- 420
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+I G N T+ +S+ G G D ++G S N+ +G DV G SG
Sbjct: 421 -------DTIYGEAGNDTLDGGADDDSLTGGEGTDSLLGGSGNDTLEGGAGADVLSGGSG 473
Query: 304 LDTFFYYAPS 313
LD F YA S
Sbjct: 474 LD-FASYASS 482
>gi|226947109|ref|YP_002802182.1| secreted bifunctional mannuronan C-5 epimerase/alginate lyase
[Azotobacter vinelandii DJ]
gi|34395511|sp|Q9ZFG9|ALGE7_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 7; AltName:
Full=Mannuronan epimerase 7
gi|3873281|gb|AAD04921.1| mannuronan C-5-epimerase AlgE7 [Azotobacter vinelandii]
gi|226722036|gb|ACO81207.1| Secreted bifunctional mannuronan C-5 epimerase/alginate lyase
[Azotobacter vinelandii DJ]
Length = 856
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+++ I G N + + + +VG SGND + G++ N+V +G+D G G D F
Sbjct: 380 DAYQFIDGSTGNDLLTGTPIADLIVGGSGNDTLSGDAGNDVLEGGAGSDRLTGGEGADIF 439
Query: 308 FYYA--PSYLYKIYRFENAIIVYDANEHKQDF 337
+ A SY + I+ +DA+ + D
Sbjct: 440 RFTAVSDSYYTASSSVADQILDFDASNDRIDL 471
>gi|239820612|ref|YP_002947797.1| outer membrane adhesin like proteiin [Variovorax paradoxus S110]
gi|239805465|gb|ACS22531.1| outer membrane adhesin like proteiin [Variovorax paradoxus S110]
Length = 2567
Score = 38.1 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVK-NYIDLNTESWSSIGGYEKNMTIA-QHTVIESVVGSSG 276
++ + G D +DL+ G + ++ID + + GG ++ I ++++GS+G
Sbjct: 2181 VRAVSSGNGADTIDLSATGTYQASFIDSRGGADNLTGGAGGDVFIGGTGNAADTLIGSAG 2240
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSG 303
ND++IG N+ +GNDV G G
Sbjct: 2241 NDLLIGGDGNDTLSGGAGNDVLRGGIG 2267
>gi|257791794|ref|YP_003182400.1| hypothetical protein Elen_2047 [Eggerthella lenta DSM 2243]
gi|257475691|gb|ACV56011.1| hypothetical protein Elen_2047 [Eggerthella lenta DSM 2243]
Length = 404
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSD 586
Y+ +EDL A++D P Q HF G E R F+ Y+ + +L +G D
Sbjct: 283 YLTHNEDLAKAYSDNP---QESLQHFIVHGAREKRMAHPCFSVASYMQGHPELKPEYGDD 339
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLY 640
A HY++ + A G +Q S+ S ++ + K++ Y
Sbjct: 340 PLAYVSHYLSTPSERNHATGYENLQTPSLEKREALSSERTCTGKRINKKRLSRY 393
>gi|25152490|ref|NP_741156.1| Zinc MetalloProtease family member (zmp-1) [Caenorhabditis elegans]
gi|21328419|gb|AAM48565.1|U41266_2 Zinc metalloprotease protein 1 [Caenorhabditis elegans]
gi|3152406|dbj|BAA28353.1| matrix metalloproteinase [Caenorhabditis elegans]
Length = 521
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 23 WSNYFIRYKPDVL-TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
W I Y + T+ R+S D + + A +WS++ D+ E+S+ + +
Sbjct: 103 WKEKIITYGCKAVGTSTRISLD------DLRRTMHQAASQWSELADVEIVESSVKNPMMV 156
Query: 82 ISS--NNGYVCTPRYDSRYFMEINF---------DKADV----WRYGIGKGTILSHNALH 126
IS+ N Y CT R+D++ F D+ + +G ++ S A H
Sbjct: 157 ISAGRENHYPCTVRFDTKTLAHAFFPTNGQIHINDRVQFAMTNYTERMGANSLYSVVA-H 215
Query: 127 EIGHALGLMH 136
E+GHALG H
Sbjct: 216 EMGHALGFSH 225
>gi|307945921|ref|ZP_07661256.1| iron-regulated protein FrpC [Roseibium sp. TrichSKD4]
gi|307769585|gb|EFO28811.1| iron-regulated protein FrpC [Roseibium sp. TrichSKD4]
Length = 482
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G E N TI + + G G+D + GNS+++ + +GND G GLDT++
Sbjct: 128 GSEGNDTIIGDVNVNILRGEGGDDAIYGNSSDDTLYGGAGNDELRGQGGLDTYY 181
>gi|196234066|ref|ZP_03132901.1| Hemolysin-type calcium-binding region [Chthoniobacter flavus
Ellin428]
gi|196221915|gb|EDY16450.1| Hemolysin-type calcium-binding region [Chthoniobacter flavus
Ellin428]
Length = 898
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GGY T+ T I++++GS+ ND + G+S N+ GND G G DTF + +
Sbjct: 201 GGYASGDTL---TGIDNILGSTFNDTLTGSSGANILIGGQGNDTLSGGGGNDTFKWMS 255
>gi|109094826|ref|XP_001083910.1| PREDICTED: stromelysin-3 [Macaca mulatta]
Length = 488
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 71/198 (35%), Gaps = 41/198 (20%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK------- 80
R++ LT L F + ++ AL WS V LTF E H+DI
Sbjct: 104 RWEKTDLTYRILRFPWQLVQEQVRQTMAEALKVWSDVTPLTFTEVHEGHADIMIDFARYW 163
Query: 81 ----FISSNNGYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
G + + + E ++FD + W G +GT L A HE GH LGL
Sbjct: 164 HGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGL 223
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + ++MS F +F Y + D +Q +
Sbjct: 224 QH-------------------TTAAKALMSAFY--------TFRYPLSLSPDDRRGIQHL 256
Query: 195 YGAPKGSLGNNIYKIEVQ 212
YG P+ ++ + + Q
Sbjct: 257 YGQPRPTVTSRTPALGPQ 274
>gi|170752013|ref|YP_001758273.1| hypothetical protein Mrad2831_5645 [Methylobacterium radiotolerans
JCM 2831]
gi|170658535|gb|ACB27590.1| hypothetical protein Mrad2831_5645 [Methylobacterium radiotolerans
JCM 2831]
Length = 227
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 18/86 (20%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL D+R G D +H++ HG EGR+P A F Y+A++
Sbjct: 23 FDPAYYLDRNPDVRRA-GLD---PLQHFLNHGWTEGRDPSAGFSTAGYLAAN-------- 70
Query: 542 DAPDLVQAGKD---HFSNFGYEEGRS 564
PD+ AG++ HF G EGRS
Sbjct: 71 --PDVAAAGQNPLIHFLQNGLAEGRS 94
>gi|6678894|ref|NP_032632.1| stromelysin-3 precursor [Mus musculus]
gi|1352125|sp|Q02853|MMP11_MOUSE RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
Precursor
gi|467683|emb|CAA78248.1| stromelysin-3 [Mus musculus]
gi|74209127|dbj|BAE24956.1| unnamed protein product [Mus musculus]
gi|148699922|gb|EDL31869.1| matrix metallopeptidase 11, isoform CRA_a [Mus musculus]
gi|148699923|gb|EDL31870.1| matrix metallopeptidase 11, isoform CRA_a [Mus musculus]
Length = 492
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFI 82
R++ LT L F + ++ AL WS+V LTF E +DI ++
Sbjct: 108 RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFARYW 167
Query: 83 SSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N G + + + E ++FD + W G +GT L A HE GH LGL
Sbjct: 168 HGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQVAAHEFGHVLGL 227
Query: 135 MH 136
H
Sbjct: 228 QH 229
>gi|124023629|ref|YP_001017936.1| hypothetical protein P9303_19291 [Prochlorococcus marinus str. MIT
9303]
gi|123963915|gb|ABM78671.1| Hypothetical protein P9303_19291 [Prochlorococcus marinus str. MIT
9303]
Length = 479
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G +N ++ + E + G++G+D+++G S ++ +GND DG SG D +
Sbjct: 351 GSAENDLLSGTSANEVIFGANGDDILLGRSGDDHVTGGNGNDRLDGGSGDDKLKGDRGAD 410
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLR-FADQCIDSVNVKQRSI 361
Y + R ++ II + E+ + + + R FA Q D + +K +
Sbjct: 411 TYTLSRGDDVIIGFSFAENDRISVGGLARKPIFATQVGDDLLLKGNGV 458
>gi|194212236|ref|XP_001491808.2| PREDICTED: similar to Matrix metalloproteinase-19 precursor
(MMP-19) (Matrix metalloproteinase RASI) (MMP-18) [Equus
caballus]
Length = 547
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 28/142 (19%)
Query: 11 ERIADHLLRDQYWSNYFIRYK----PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+R +LL + W ++++ P L H A+E A WS V
Sbjct: 94 QRTLKYLLLGR-WRKKHLKFRILNLPSTLPAH-----------TAREALLQAFQYWSDVT 141
Query: 67 DLTFEET-SIHSDIKF-ISSNNGYVCTPRYDSR----------YFMEINFDKADVWRYGI 114
LTF+E + +DI+ C+ +D ++FD+ ++W
Sbjct: 142 PLTFQEVHAGWADIRLSFHGRQSLYCSKDFDGPGRVLAHADIPELGSVHFDEDELWTERT 201
Query: 115 GKGTILSHNALHEIGHALGLMH 136
+G L A HE+GHALGL H
Sbjct: 202 YRGVNLRIIAAHELGHALGLGH 223
>gi|302671468|ref|YP_003831428.1| hypothetical protein bpr_I2113 [Butyrivibrio proteoclasticus B316]
gi|302395941|gb|ADL34846.1| hypothetical protein bpr_I2113 [Butyrivibrio proteoclasticus B316]
Length = 470
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD Y D+ +G D GA +HY+ HG +EGR +A + I+S E+ F
Sbjct: 314 FDPVYYASQNPDVVEHYGDDPGALYQHYLEHGEEEGRAATEAEAQQQISSQEEAYLKFQQ 373
Query: 543 APDLVQAGKDH 553
DL +A ++
Sbjct: 374 --DLARAQEEQ 382
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
FD Y D+ +G D GA +HY+ HG +EGR +A + I+S E+
Sbjct: 314 FDPVYYASQNPDVVEHYGDDPGALYQHYLEHGEEEGRAATEAEAQQQISSQEE 366
>gi|254510651|ref|ZP_05122718.1| 5'-nucleotidase [Rhodobacteraceae bacterium KLH11]
gi|221534362|gb|EEE37350.1| 5'-nucleotidase [Rhodobacteraceae bacterium KLH11]
Length = 1237
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T IE+V+GS DV+IG++ +N + GNDV +G G D + + FE
Sbjct: 1121 TSIENVIGSDDGDVIIGSNQDNKLNGADGNDVLNGEGGDDLLIGGEGN---DTFVFEGEF 1177
Query: 326 IVYDANEHKQDFLSDVERLRFAD 348
N+ QDF S ++L F D
Sbjct: 1178 ----GNDTVQDFQSGFDQLDFGD 1196
>gi|218439530|ref|YP_002377859.1| lipolytic protein G-D-S-L family [Cyanothece sp. PCC 7424]
gi|218172258|gb|ACK70991.1| lipolytic protein G-D-S-L family [Cyanothece sp. PCC 7424]
Length = 681
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IE++ G+S ND +IGN++ N+ G+D+ G G D F Y
Sbjct: 537 IENITGTSFNDTLIGNNSANIITGGQGDDLLTGGEGADVFAY 578
>gi|296101383|ref|YP_003611529.1| large repetitive protein [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055842|gb|ADF60580.1| large repetitive protein [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 2315
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 30/143 (20%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVF---DGSSGLDTFFYYAPSYLYK------- 317
IE +VGSS D NSANNVF GND F +G G DT Y + L
Sbjct: 2155 IEGLVGSSQQDTFTDNSANNVFEGRGGNDAFYLVNG--GNDTLMYKVLAGLSNDSTGGNG 2212
Query: 318 ---IYRFENAIIVYDANEHKQDFLSDVERLR-------FADQCIDSVNVKQRSILEYTAS 367
IY F+ +V D++ D L E L F D+ ++ R +L+Y
Sbjct: 2213 HDTIYGFKVGNLVKDSDA---DLLDMSELLDYKGSISFFEDEGKLELDYSSRGVLDYVK- 2268
Query: 368 YEDLIQVIGQDVFESMKHFYEFG 390
++V+G D S+ + G
Sbjct: 2269 ----VEVVGSDTVISIDRDGQGG 2287
>gi|92118504|ref|YP_578233.1| hypothetical protein Nham_3027 [Nitrobacter hamburgensis X14]
gi|91801398|gb|ABE63773.1| hypothetical protein Nham_3027 [Nitrobacter hamburgensis X14]
Length = 1278
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 217 PFIQ-TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
P+ Q +IYD+G D L + G + NT+S ++ N T A+ T GSS
Sbjct: 1115 PYSQISIYDNGKGDALGVAKAGADGKW-SFNTKS--AVSDTVHNFT-AEVTNKAGHTGSS 1170
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
++G N+V +SGND+F G G DTF +AP++
Sbjct: 1171 SGSAILGTGGNDVLKSTSGNDLFHGHGGHDTFV-FAPNF 1208
>gi|260820866|ref|XP_002605755.1| hypothetical protein BRAFLDRAFT_121873 [Branchiostoma floridae]
gi|229291090|gb|EEN61765.1| hypothetical protein BRAFLDRAFT_121873 [Branchiostoma floridae]
Length = 488
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 25/121 (20%)
Query: 40 LSFDITELNPNAQE------VARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR 93
L++ I P+ +AR A W++V LTF S +DI+ + +
Sbjct: 94 LTYRINNFTPDLPRDQVVDAIAR-AFDVWAQVTPLTFRRVSGPADIEIRFAAGSHGDGNS 152
Query: 94 YDSRYFM-------------EINFDKADVWRYGIG-----KGTILSHNALHEIGHALGLM 135
+DSR + + +FD++++W+ G GT L A HE GH+LGL
Sbjct: 153 FDSRGGVLAHAYQPGGGIGGDAHFDESEIWQIGGPNIASLSGTDLFSVAAHEFGHSLGLG 212
Query: 136 H 136
H
Sbjct: 213 H 213
>gi|34395497|sp|Q44494|ALGE1_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 1; AltName:
Full=Mannuronan epimerase 1
gi|790692|gb|AAA87311.1| mannuronan C-5-epimerase [Azotobacter vinelandii]
Length = 1403
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G N ++ E+++G +G+D + G++ N++ +G D G +G DTF +
Sbjct: 384 ATLEGSAGNDALSGTEAHETLLGQAGDDRLNGDAGNDILDGGAGRDNLTGGAGADTFRFS 443
Query: 311 APSYLYKI--YRFENAIIVYDANEHKQDF 337
A + Y+ F + I +DA+E D
Sbjct: 444 ARTDSYRTDSASFNDLITDFDADEDSIDL 472
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 20/91 (21%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFD------------------GSSGLDTFF 308
+E G+ GNDV++G+ AN+ + +G+D D G +G DTF
Sbjct: 1221 TVEVPQGTDGNDVLVGSDANDQLYGGAGDDRLDGGAGDDLLDGGAGRDDLTGGTGADTFV 1280
Query: 309 YYA--PSYLYKIYRFENAIIVYDANEHKQDF 337
+ A SY F + I+ +DA+E + D
Sbjct: 1281 FAARTDSYRTDAGVFNDLILDFDASEDRIDL 1311
>gi|294677437|ref|YP_003578052.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294476257|gb|ADE85645.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 2065
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+ G E N TI +++ G +GND + G ++ +GND+ DG SGLDT
Sbjct: 1372 SVLGGEGNDTILGERGDDTLDGGAGNDSITGGLDDDSILGGAGNDILDGRSGLDTI 1427
>gi|220926496|ref|YP_002501798.1| hypothetical protein Mnod_6737 [Methylobacterium nodulans ORS 2060]
gi|219951103|gb|ACL61495.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 115
Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 18/86 (20%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL +Y D+ G D HY+ G KEGR+P A F Y++++
Sbjct: 21 FDPVYYLATYPDVAE-HGCD---PLEHYLKFGWKEGRDPSAQFSTSGYLSAN-------- 68
Query: 542 DAPDLVQAGKD---HFSNFGYEEGRS 564
PD+ +AG + H+ G EGRS
Sbjct: 69 --PDVAEAGINPLVHYRLHGLAEGRS 92
>gi|126335321|ref|XP_001371136.1| PREDICTED: similar to Purinergic receptor P2Y, G-protein coupled, 5
[Monodelphis domestica]
Length = 569
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 101 EINFDKADVWRYGI--GKGTILSHNALHEIGHALGLMH 136
+ +FD +VW +G G GT L A+HE GHALGL H
Sbjct: 211 DTHFDDEEVWTFGASDGSGTDLFAVAVHEFGHALGLAH 248
>gi|317419524|emb|CBN81561.1| Matrix metalloproteinase-21 [Dicentrarchus labrax]
Length = 685
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 50/187 (26%)
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYV------CTPRYD--------SRYF 99
+ R A WS+V L F E + HS ++ + G+ C R+D + +
Sbjct: 311 IFRLAFRMWSEVSPLEFVEDT-HSPLEDVDIRLGFGTGRHLGCNQRFDGSGQEFAHAWFL 369
Query: 100 MEINFDKADVWR-YGIGKGTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYEN 155
+I+FD + + G G L A+HEIGH LGL H PGS
Sbjct: 370 GDIHFDDDEHFTGPNAGSGISLLKVAVHEIGHVLGLPHIYRPGSI--------------- 414
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+ ++P +S + + +D A+Q +YG KG N ++ ++++
Sbjct: 415 ------MQPSYLPHESGFEVDW--------TDRKAIQHLYGGCKGPF-NTVFDW-IRKEK 458
Query: 216 SPFIQTI 222
+P+ + +
Sbjct: 459 TPYGEVV 465
>gi|322791350|gb|EFZ15837.1| hypothetical protein SINV_05285 [Solenopsis invicta]
Length = 500
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 37 THRLSFDITELNPNA--QEVARWALGEWSKVVDLTFEETS----IHSDIKFISSNNG--- 87
T+++S T LN +E+A A WS DLTF + +H +++F +G
Sbjct: 73 TYKISKYPTGLNKQEVDKEIAN-AFNVWSGETDLTFTRKTGHENVHIEVRFEVGEHGDGD 131
Query: 88 ------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
Y Y + +FD ++ W +GT L A HE GH+LGL H
Sbjct: 132 PFDGPGGTLAHAYFPVYGGDAHFDDSERWTIRSYRGTNLFQVAAHEFGHSLGLSH 186
>gi|159795741|pdb|2Z8Z|A Chain A, Crystal Structure Of A Platinum-Bound S445c Mutant Of
Pseudomonas Sp. Mis38 Lipase
Length = 617
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S+ G T+ H + + G GND +IG N+VF +GND+ + G DTF +
Sbjct: 489 ASVKGTNGADTLKAHAGGDWLFGLDGNDHLIGGVGNDVFVGGAGNDLMESGGGADTFLF 547
>gi|149188797|ref|ZP_01867088.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
gi|148837458|gb|EDL54404.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
Length = 1480
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 221 TIYDSGGDD-----LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T+Y GDD L D L GG N ++ G E N T+ + V G
Sbjct: 1237 TLYGQSGDDQMFGELGDDKLFGGSGN---------DNLSGKEGNDTLDGGGGSDYVDGGV 1287
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
GND + G S +++ F GND DG SGLD F
Sbjct: 1288 GNDTLRGGSGDDLVFGQEGNDSLDGGSGLDQLF 1320
>gi|330945876|gb|EGH47249.1| calcium binding hemolysin protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 260
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + GN N+V +GNDV +G +G DT+ + S
Sbjct: 69 GGAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYLFGKGS------------------- 109
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED---LIQVIG-QDVFESMKHF 386
QD +++ +R D++ + + + + E+ LIQVIG D HF
Sbjct: 110 -GQDTVNNGGEVRIG--KTDTLKLTDLNTADVQVTRENNDLLIQVIGSSDSLRVASHF 164
>gi|327553719|gb|AEB00313.1| metalloproteinase [Clostera anachoreta granulovirus]
Length = 412
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 102 INFDKADVWRYG----IGKGTILSHNALHEIGHALGLMH---PGSYNGGYPVY------- 147
I+ D +VW G G+GT H +HEIGHALGL H P S +PVY
Sbjct: 125 IHLDADEVWVTGGDVSNGRGTSYLHTLIHEIGHALGLYHSSDPKSIM--FPVYRGDRFDL 182
Query: 148 ------GVDNDYENDSFLTSVMSYFMPQDSM 172
G+D Y+++ T V S + D +
Sbjct: 183 GVDDLNGLDQLYDHNPKRTDVTSKTLTTDHI 213
>gi|317139374|ref|XP_001817464.2| hypothetical protein AOR_1_690174 [Aspergillus oryzae RIB40]
Length = 226
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 61 EWSKV-VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYF---MEINFDKADVWRYGIGK 116
EW+K+ + +TFE + D F+ S+ G T S YF ++NF + +
Sbjct: 82 EWNKLNIGVTFEFVPLAKDANFVLSHGGNKGT-VLASAYFPNNKDLNFVYVYSFAFQPDW 140
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
L HE+GH +GL H + N G P + D N+ SVM+Y +
Sbjct: 141 KPFLWRVFTHELGHVIGLRHEFAMNPG-PYFEGDAVQINERNPLSVMNYRREPPEIQQ-- 197
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGS 201
SD+ A +K Y P G+
Sbjct: 198 ---------SDVEATKKFYSFPAGT 213
>gi|159795740|pdb|2Z8X|A Chain A, Crystal Structure Of Extracellular Lipase From Pseudomonas
Sp. Mis38
gi|266618504|pdb|2ZVD|A Chain A, Crystal Structure Of Pseudomonas Sp. Mis38 Lipase In An
Open Conformation
gi|266618505|pdb|2ZVD|C Chain C, Crystal Structure Of Pseudomonas Sp. Mis38 Lipase In An
Open Conformation
gi|296863406|pdb|3A6Z|A Chain A, Crystal Structure Of Pseudomonas Sp. Mis38 Lipase (Pml) In
T Conformation Following Dialysis Against Ca-Free Buffer
gi|296863407|pdb|3A6Z|C Chain C, Crystal Structure Of Pseudomonas Sp. Mis38 Lipase (Pml) In
T Conformation Following Dialysis Against Ca-Free Buffer
gi|296863408|pdb|3A70|A Chain A, Crystal Structure Of Pseudomonas Sp. Mis38 Lipase In
Complex Diethyl Phosphate
gi|296863409|pdb|3A70|C Chain C, Crystal Structure Of Pseudomonas Sp. Mis38 Lipase In
Complex Diethyl Phosphate
gi|6009631|dbj|BAA84997.1| lipase [Pseudomonas sp. MIS38]
Length = 617
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S+ G T+ H + + G GND +IG N+VF +GND+ + G DTF +
Sbjct: 489 ASVKGTNGADTLKAHAGGDWLFGLDGNDHLIGGVGNDVFVGGAGNDLMESGGGADTFLF 547
>gi|157820645|ref|NP_001100629.1| matrix metalloproteinase-19 [Rattus norvegicus]
gi|149029634|gb|EDL84805.1| matrix metalloproteinase 19 (predicted) [Rattus norvegicus]
gi|225422918|gb|ACN90949.1| matrix metalloproteinase 19 [Rattus norvegicus]
Length = 517
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 62 WSKVVDLTFEETSI-HSDIK--FISSNNGYVCTPRYDSR----------YFMEINFDKAD 108
WS V LTF E +DI+ F + Y C+ +D ++FD +
Sbjct: 137 WSNVAPLTFREVKAGWADIRLSFHGRQSPY-CSNSFDGPGKVLAHADVPELGSVHFDNDE 195
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMH 136
W G +G L A HE+GHALGL H
Sbjct: 196 FWTEGTYQGVNLRIIAAHEVGHALGLGH 223
>gi|300250958|gb|ADJ95797.1| MMP11 protein precursor [Canis lupus familiaris]
Length = 445
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFISSNN-- 86
LT L F + ++ AL WS+V LTF E +DI ++ +N
Sbjct: 67 LTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLP 126
Query: 87 ----GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
G + + + E ++FD + W G +GT L A HE GH LGL H
Sbjct: 127 FDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNQGTDLLQVAAHEFGHTLGLQH 182
>gi|224418782|ref|ZP_03656788.1| recombination factor protein RarA [Helicobacter canadensis MIT
98-5491]
gi|253826695|ref|ZP_04869580.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313142299|ref|ZP_07804492.1| recombination factor protein RarA [Helicobacter canadensis MIT
98-5491]
gi|253510101|gb|EES88760.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131330|gb|EFR48947.1| recombination factor protein RarA [Helicobacter canadensis MIT
98-5491]
Length = 391
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
++++ GSD AA +Y+ ++ G NP+ I + ED+ NA +A +L +
Sbjct: 228 IKSIRGSDENAAI-YYLARLIEGGENPEFIARRLVILASEDIGNANPNALNLANSTLQSV 286
Query: 555 SNFGYEEGRSITFNPDLYLTS 575
+ GY E R I +YL +
Sbjct: 287 AKIGYPEARIILSQCAIYLCA 307
>gi|254513175|ref|ZP_05125240.1| calcium binding hemolysin protein, putative [Rhodobacteraceae
bacterium KLH11]
gi|221532179|gb|EEE35175.1| calcium binding hemolysin protein, putative [Rhodobacteraceae
bacterium KLH11]
Length = 12584
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTV----IESVVGSSGNDVVIGNSANNVFFESS 293
G K+Y+ +++ S SS N++++ + IE++VG+S D +IG+SA+N +
Sbjct: 7617 GRKSYLYVSSPSRSS---PAVNLSVSSVELSIRNIENIVGTSLADTLIGDSASNTLSGGA 7673
Query: 294 GNDVFDGSSGLDTF 307
GND+ +G++G D
Sbjct: 7674 GNDLIEGAAGADKL 7687
>gi|156404462|ref|XP_001640426.1| predicted protein [Nematostella vectensis]
gi|156227560|gb|EDO48363.1| predicted protein [Nematostella vectensis]
Length = 309
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 25/143 (17%)
Query: 19 RDQYWSNYFIRYKPDVLTTH---RLSFDI---TELNPNAQ-EVARWALGEWSKVVDLTFE 71
+ Q SN RY ++ H L + + +L+ + Q ++ A W+KV LTF
Sbjct: 85 KSQGKSNRARRYSTNIANRHSQNNLKYYVQHGADLSADLQDQIFATAFQHWAKVSSLTFS 144
Query: 72 ETSIHSD----IKFISSNNG-----YVCTPRYD---------SRYFMEINFDKADVWRYG 113
+TSI +D I F S N+ +CT +D S + +FD+ + + +
Sbjct: 145 QTSILNDANLLISFGSRNHKGTAREPICTDPFDGEGGTLAHASLAGADAHFDEDETFTHN 204
Query: 114 IGKGTILSHNALHEIGHALGLMH 136
G L A+HE GH LGL H
Sbjct: 205 SYDGVNLLWVAVHEFGHNLGLDH 227
>gi|170719861|ref|YP_001747549.1| Pyrrolo-quinoline quinone [Pseudomonas putida W619]
gi|169757864|gb|ACA71180.1| Pyrrolo-quinoline quinone [Pseudomonas putida W619]
Length = 3066
Score = 38.1 bits (87), Expect = 5.4, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 221 TIYDS-----GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI+D+ GG + L +GG N++ N +++ G Y + T+A VI V+ +
Sbjct: 428 TIHDNSASIVGGTAMSSLVRLGGANNHVLENVAIYNNTGTYSASGTVAGGAVI--VLSNV 485
Query: 276 GNDVVIGNS--ANNVFFESSGNDVFDGSSG 303
G V I NS ANNVFF + + G
Sbjct: 486 GGSVNIVNSTIANNVFFNTGSGSITSAGLG 515
>gi|270017158|gb|EFA13604.1| hypothetical protein TcasGA2_TC010302 [Tribolium castaneum]
Length = 527
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 29/114 (25%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY-----------VCTPRYDSR--- 97
+E+A+ A +W V L FE S DI +N + VC+ +D +
Sbjct: 133 KELAQKAFDQWESVSKLKFEFNSNKPDILISFANMPFQHNHNSRCQKGVCSNSFDGKGNI 192
Query: 98 ----YF------MEINFDKADVWRYG-IGKGTILSHN----ALHEIGHALGLMH 136
+F + I+FDK++ W +G +G N LHEIGH LG+ H
Sbjct: 193 LAHGFFPNNDECLGIHFDKSENWYFGELGNTPDGQTNFYTVLLHEIGHTLGIEH 246
>gi|126739119|ref|ZP_01754813.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126719736|gb|EBA16444.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 692
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + V + D P+ +I GDD + D TL+GG N E S+ G + T
Sbjct: 337 FTLPVVEAD-PYADSISGGAGDDTIFGEGGDDTLLGGDDNDSIDGGEGADSLEGGSGDDT 395
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ ++++VG +G+D + G S ++ S G D G DTF L
Sbjct: 396 LIGGAGVDTLVGGTGSDSITGGSGDDSIKLSEG-DTATGGDDRDTF------TLIDRGET 448
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+A I D NE D+ +D V RS L +T S
Sbjct: 449 GSASITIDGNEGGDDW-----------DTLDLNGVADRSTLSFTDS 483
>gi|126642450|ref|YP_001085434.1| putative hemolysin-type calcium-binding region [Acinetobacter
baumannii ATCC 17978]
gi|126388334|gb|ABO12832.1| Putative Ig protein [Acinetobacter baumannii ATCC 17978]
Length = 442
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I+L T+ ++IGG ++ + + + + G +GND + GN ++V +GND DG
Sbjct: 55 INLGTQIENAIGGAYDDILVGNN-LSNRLEGGAGNDTLKGNWGDDVLLGGAGNDTLDGGK 113
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
G D+ Y + ++ IV + +E +SD+
Sbjct: 114 GADSLIGGTGDDTYYVDNVGDS-IVENTSEGNDKVISDIN 152
>gi|215794564|pdb|2ZJ7|A Chain A, Crystal Structure Of D157a Mutant Of Pseudomonas Sp. Mis38
Lipase
Length = 617
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S+ G T+ H + + G GND +IG N+VF +GND+ + G DTF +
Sbjct: 489 ASVKGTNGADTLKAHAGGDWLFGLDGNDHLIGGVGNDVFVGGAGNDLMESGGGADTFLF 547
>gi|215794563|pdb|2ZJ6|A Chain A, Crystal Structure Of D337a Mutant Of Pseudomonas Sp. Mis38
Lipase
Length = 617
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S+ G T+ H + + G GND +IG N+VF +GND+ + G DTF +
Sbjct: 489 ASVKGTNGADTLKAHAGGDWLFGLDGNDHLIGGVGNDVFVGGAGNDLMESGGGADTFLF 547
>gi|73988268|ref|XP_852601.1| PREDICTED: similar to Matrix metalloproteinase-26 precursor
(MMP-26) (Matrilysin-2) (Endometase) [Canis familiaris]
Length = 285
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 38 HRLSFDIT----ELNPN-AQEVARWALGEWSKVVDLTFEET-SIHSDIK--FISSNNGYV 89
H L++ I ++NP+ + + + A+ WS V L F++ S +DIK F +G
Sbjct: 102 HTLTYRIINYPRDINPSTVKNIMQNAVSIWSNVTPLIFQQVKSQDADIKISFWDLAHGD- 160
Query: 90 CTP------------RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
C P +SR I+FD+ + W +G L A+HE+GH+LGL+H
Sbjct: 161 CWPFDGPGGVLGHAFLPNSRAPGVIHFDRGEHWSTSY-RGFNLFLVAIHELGHSLGLLHS 219
Query: 138 GSYNG-GYPVY 147
S N YP Y
Sbjct: 220 KSLNSIMYPRY 230
>gi|242310186|ref|ZP_04809341.1| recombination factor protein RarA [Helicobacter pullorum MIT
98-5489]
gi|239523483|gb|EEQ63349.1| recombination factor protein RarA [Helicobacter pullorum MIT
98-5489]
Length = 388
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
++++ GSD AA +Y+ ++ G NP+ I + ED+ NA +A +L +
Sbjct: 228 IKSIRGSDENAAI-YYLARLIEGGENPEFIARRLVILASEDIGNANPNALNLATSTMQSV 286
Query: 555 SNFGYEEGRSITFNPDLYLTS 575
+ GY E R I +YL++
Sbjct: 287 AKIGYPEARIILSQCVIYLSA 307
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
E +K+F L+ G + + Y + + ++++ GSD AA +Y+ ++ G NP+
Sbjct: 199 IELLKNFRTHSLNSGTNDSNTHYNLISAM--IKSIRGSDENAAI-YYLARLIEGGENPEF 255
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
I + ED+ NA +A +L + G E R + +YL +
Sbjct: 256 IARRLVILASEDIGNANPNALNLATSTMQSVAKIGYPEARIILSQCVIYLSA 307
>gi|124024815|ref|YP_001013931.1| hypothetical protein NATL1_01021 [Prochlorococcus marinus str.
NATL1A]
gi|123959883|gb|ABM74666.1| Hypothetical protein NATL1_01021 [Prochlorococcus marinus str.
NATL1A]
Length = 595
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G G DV+ G N+ F + GND DG S D Y+ ++ + N ++
Sbjct: 312 EVLDGIDGPDVLKGGLGNDTFKGNGGNDTIDGGSDFD-IATYSGNFSDYTFTIANKVVTI 370
Query: 329 DANEHKQ----DFLSDVERLRFADQ--CIDSVNVKQRSILEYTA 366
N + D LS++E+L F D+ I S +K +L + A
Sbjct: 371 SDNRLSENDGIDTLSNIEKLTFVDKNALITSKEIKAIDVLGFQA 414
>gi|307826432|ref|ZP_07656631.1| Hemolysin-type calcium-binding region [Methylobacter tundripaludum
SV96]
gi|307732529|gb|EFO03407.1| Hemolysin-type calcium-binding region [Methylobacter tundripaludum
SV96]
Length = 843
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 29/107 (27%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI------------- 268
GDDLL D TLIGG+ N L ++ E N+ + H
Sbjct: 733 GDDLLIGGGNDDTLIGGIGNDTLLGDDN-------ENNLALPYHGNDDLDGGAGDDKLYG 785
Query: 269 ----ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++++G S ND + G+S N++ +GND+ G G DT+ A
Sbjct: 786 GDGNDTLLGGSENDTLYGDSGNDILIGGTGNDIMYGGEGNDTYLINA 832
>gi|160773895|gb|AAI55488.1| LOC100127856 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
R H R Y N ++K D+LT L+ ++ AL W V L F
Sbjct: 123 RCGKHEQRMSY--NLGSKWKKDMLTYKILNTTAQLPEKMVKDELSKALKVWQDVSSLKFV 180
Query: 72 ETSIHS----DIKFISS------NNGYVCTPRYDSRYFM------------EINFDKADV 109
E I++ D+ F+S N + R FM +++ D +
Sbjct: 181 EVGINATADIDMFFVSGLHNDGIKNAFDGPGRVLGHAFMPPFSKNKKDIDGDLHLDNDEK 240
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMH 136
W KG L A HE+GHALGL H
Sbjct: 241 WTINEKKGVNLLQAAAHELGHALGLDH 267
>gi|126740125|ref|ZP_01755815.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126718944|gb|EBA15656.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 546
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 234 TLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
TL GG N I++NT SWSS + + +S+ G+ G+D ++G ++
Sbjct: 276 TLYGGEGNDRIEVNTHSWSS---RNTGSFVDGGSGNDSISGAIGDDTLLGGDGDDTIRGG 332
Query: 293 SGNDVFDGSSGLDTFF 308
SG D DG SG D F
Sbjct: 333 SGADSIDGGSGDDRLF 348
>gi|301620474|ref|XP_002939595.1| PREDICTED: matrix metalloproteinase-19 [Xenopus (Silurana)
tropicalis]
Length = 573
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
R H R Y N ++K D+LT L+ ++ AL W V L F
Sbjct: 137 RCGKHEQRMSY--NLGSKWKKDMLTYKILNTTAQLPEKMVKDELSKALKVWQDVSSLKFV 194
Query: 72 ETSIHS----DIKFISS------NNGYVCTPRYDSRYFM------------EINFDKADV 109
E I++ D+ F+S N + R FM +++ D +
Sbjct: 195 EVGINATADIDMFFVSGLHNDGIKNAFDGPGRVLGHAFMPPFSKNKKDIDGDLHLDNDEK 254
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMH 136
W KG L A HE+GHALGL H
Sbjct: 255 WTINEKKGVNLLQAAAHELGHALGLDH 281
>gi|90581647|ref|ZP_01237437.1| putative RTX toxin [Vibrio angustum S14]
gi|90437177|gb|EAS62378.1| putative RTX toxin [Vibrio angustum S14]
Length = 3056
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT-VIESVVGSSGNDVVIGNSANN 287
D+ +LT+ G L E +SIG N T T I+ + SG++ ++G ++++
Sbjct: 2872 DIANLTMTGNSAQDFTLTIEPNASIG----NQTATGTTQTIDFKIAVSGDNTLVGTASDD 2927
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-----FLSDVE 342
V GND+ G SG D+F + + ++ I+ +D + + LS+V
Sbjct: 2928 VIIGGKGNDIMSGDSGNDSFIFKSDDLGSNSVPAQDTILDFDTTINSDNIDLSAILSNVT 2987
Query: 343 RLRFADQCID 352
AD ID
Sbjct: 2988 DGISADNYID 2997
>gi|166406909|gb|ABY87417.1| matrix metalloproteinase 1 [Haliotis diversicolor]
Length = 205
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 16/91 (17%)
Query: 62 WSKVVDLTFEETSIHSDI--KFISSNNGYVCTPRYDSRYFM--------------EINFD 105
W +V LTF+ T DI KF +G +D + + +FD
Sbjct: 2 WKEVTPLTFKYTEGTPDIEVKFARGEHGDGAYNAFDGKGKTLAHAFGPGGHPISGDTHFD 61
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ W Y +GT L A HE GHALGL H
Sbjct: 62 DDEEWTYHEDRGTELETVAAHEFGHALGLGH 92
>gi|34148611|gb|AAQ62779.1| lipase [Pseudomonas sp. JZ-2003]
Length = 617
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+Q K+ F+ ++ DD++ G+K L T+ SS+ G + + H +
Sbjct: 453 IQSKEPGFLWGLFK---DDVVHQVTDQGLKVGSQL-TQYASSVKGDGGDNLLKAHAGGDW 508
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G GND +IG N+VF +GND+ + G +TF +
Sbjct: 509 LFGLDGNDHLIGGKGNDVFVGGAGNDLMESGGGNNTFLF 547
>gi|149925493|ref|ZP_01913757.1| hypothetical protein LMED105_04697 [Limnobacter sp. MED105]
gi|149825610|gb|EDM84818.1| hypothetical protein LMED105_04697 [Limnobacter sp. MED105]
Length = 940
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 384 KHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVK-EGRN--P 437
+H+ ++G+ +GR F Y Y+ Y DLR FG + A H+ +G + EGRN P
Sbjct: 737 RHWLDYGIEQGRQGSPNFSLYSYMARYSDLRRAFGEENYETAITHWFDNGEELEGRNASP 796
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ +E D+ ++ + F GR V + Y G +
Sbjct: 797 TSSDKVEVSGPARAGGGGGGFWSDMATCKNEYVTGFRIGAGRVVDRVQFRYPGGW 851
>gi|148699924|gb|EDL31871.1| matrix metallopeptidase 11, isoform CRA_b [Mus musculus]
Length = 516
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 18/124 (14%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH---SDI-----K 80
R++ LT L F + ++ AL WS+V LTF T +H +DI +
Sbjct: 108 RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTF--TEVHEGRADIMIDFAR 165
Query: 81 FISSNN------GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ +N G + + + E ++FD + W G +GT L A HE GH L
Sbjct: 166 YWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQVAAHEFGHVL 225
Query: 133 GLMH 136
GL H
Sbjct: 226 GLQH 229
>gi|289208488|ref|YP_003460554.1| hypothetical protein TK90_1310 [Thioalkalivibrio sp. K90mix]
gi|288944119|gb|ADC71818.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix]
Length = 542
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+++VGS GNDV+IG ++V F SG D G +G DT
Sbjct: 386 DTLVGSIGNDVLIGGDGDDVLFGGSGGDTLIGGAGNDTL 424
>gi|301773284|ref|XP_002922058.1| PREDICTED: matrix metalloproteinase-20-like [Ailuropoda
melanoleuca]
gi|281341729|gb|EFB17313.1| hypothetical protein PANDA_011000 [Ailuropoda melanoleuca]
Length = 483
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 71/206 (34%), Gaps = 48/206 (23%)
Query: 29 RYKPDVLTTHRLSFDITELNP-NAQEVARWALGEWSKVVDLTFE-------------ETS 74
++K + LT +R+S + P + AL WS V L F ET
Sbjct: 116 KWKKNTLT-YRISKYTPSMTPAEVDKAVEMALQAWSSAVPLGFVRVNAGEADIMISFETG 174
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
H D G + + +FD A+ W G+ G L A HE GHALG
Sbjct: 175 DHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGM-NGFNLFTVAAHEFGHALG 233
Query: 134 LMH---PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L H P + YP Y N Y + +P+D D+
Sbjct: 234 LAHSTDPSALM--YPTYKYQNPY----------GFHLPKD----------------DVKG 265
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDS 216
+Q +YG K LG Q S
Sbjct: 266 IQALYGPRKPLLGKPTVPHAPPQNPS 291
>gi|6752871|gb|AAF27914.1|AF218037_1 RTX protein [Aeromonas salmonicida]
Length = 2747
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GGDD L GG N I ++ G N T+ + +++ G +GND +
Sbjct: 2557 LFGQGGDDFL----FGGAGNDILFGGSGNDTLYGESGNDTLYGGSGNDTLYGGAGNDTLS 2612
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N++ GND+ G +G DTF +
Sbjct: 2613 GGLGNDILVGGLGNDILKGDAGADTFTWL 2641
>gi|73995874|ref|XP_543534.2| PREDICTED: similar to matrix metalloproteinase 11 preproprotein
[Canis familiaris]
Length = 489
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-----KFISSNN-- 86
LT L F + ++ AL WS+V LTF E +DI ++ +N
Sbjct: 111 LTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLP 170
Query: 87 ----GYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
G + + + E ++FD + W G +GT L A HE GH LGL H
Sbjct: 171 FDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNQGTDLLQVAAHEFGHTLGLQH 226
>gi|33591934|ref|NP_879578.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis Tohama I]
gi|34978355|sp|P15318|CYAA_BORPE RecName: Full=Bifunctional hemolysin/adenylate cyclase; AltName:
Full=AC-HLY; AltName: Full=ACT; AltName: Full=Cyclolysin;
Contains: RecName: Full=Calmodulin-sensitive adenylate
cyclase; AltName: Full=ATP pyrophosphate-lyase; AltName:
Full=Adenylyl cyclase; Contains: RecName: Full=Hemolysin;
Flags: Precursor
gi|33571578|emb|CAE41066.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis Tohama I]
gi|66820294|gb|AAY57201.1| adenylate cyclase toxin [Bordetella hinzii LMG 13501]
gi|71979945|gb|AAZ57194.1| adenylate cyclase toxin [Bordetella hinzii BC-306]
gi|332381351|gb|AEE66198.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis CS]
Length = 1706
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+ VGS+ +DV+IG++ NV +GNDV G +G D
Sbjct: 1524 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLL 1564
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ ++G +GND + GN+ +N SG+D DG +G DT
Sbjct: 1010 VQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLV 1050
>gi|212636078|ref|YP_002312601.1| chitinase C [Shewanella piezotolerans WP3]
gi|212557562|gb|ACJ30016.1| chitinase C [Shewanella piezotolerans WP3]
Length = 789
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
KA+ W YG G ALHE+GH +GL H Y Y + G D
Sbjct: 118 KANFWNYG-GNSRTFESTALHEVGHTVGLAHENRY---YNIMGTD 158
>gi|325919466|ref|ZP_08181489.1| hemolysin-type calcium-binding protein [Xanthomonas gardneri ATCC
19865]
gi|325550053|gb|EGD20884.1| hemolysin-type calcium-binding protein [Xanthomonas gardneri ATCC
19865]
Length = 790
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 67/176 (38%), Gaps = 14/176 (7%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T A + V G +GNDVV G + ++ GNDV +G G D F
Sbjct: 518 NGTFAGTVSDDLVWGGTGNDVVTGGAGADLIGGGYGNDVLNGGDGSDQLFGGMGDDSLDG 577
Query: 319 YRFENAIIVYDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ D N+ S +RL A + SVN + R + LI G
Sbjct: 578 GDGNDLLLGGDGNDSLSGG-SGTDRLDGGAGDDVLSVNPQARDSV--------LIGGTGN 628
Query: 378 DVFESM--KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
D Y F +G D ++ Y G+ D + VFG A+ + G+
Sbjct: 629 DTLNGSWYSDTYLFNKGDGHDTVLETSTYSGAVD--KVVFGEGIAASDVRVLRQGL 682
>gi|163851641|ref|YP_001639684.1| glycosyl transferase family protein [Methylobacterium extorquens
PA1]
gi|163663246|gb|ABY30613.1| glycosyl transferase family 2 [Methylobacterium extorquens PA1]
Length = 1035
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH-------E 450
FD Y +Y D+ + G RHY+ HG EGR+P A F L Y H
Sbjct: 35 FDPAFYRSAYPDV----AAGGGDPLRHYLDHGWLEGRDPSAVFSTLFYADRHFADRAPIN 90
Query: 451 DLINAFADAP-DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
L++ +P + ++V S+F + V + Y Y L + G + A H
Sbjct: 91 PLLHYAGLSPTERLRVATQPGSDFPALQAGVV--EPYFDAPYYARLAGLEGGEDPLA--H 146
Query: 510 YITHGVKEGRNP-DAFKALEYIASH 533
Y+T G + G +P DAF Y+ H
Sbjct: 147 YLTKGWRRGLDPNDAFSGDAYLQRH 171
>gi|320665233|gb|EFX32326.1| hypothetical protein ECOSU61_23275 [Escherichia coli O157:H7 str.
LSU-61]
Length = 6925
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 225 SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+GG D++D L GV T + SS + T IE + GS+ ND++ G+
Sbjct: 6726 NGGMDVVDFRLSTVGV-------TANLSSTAAQATGFNTSTFTNIEGISGSNFNDILTGS 6778
Query: 284 SANNVFFESSGNDVFD-GSSGLDTFFY 309
S +N GND + G+ G DT Y
Sbjct: 6779 SGDNQLEGRGGNDTLNIGNGGHDTLLY 6805
>gi|302875309|ref|YP_003843942.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578166|gb|ADL52178.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 2147
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI--- 325
+S++G +GND ++G N++ +G+D +G G DT Y IY+F+
Sbjct: 1193 DSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGGIGNDTLI---GGYGTDIYKFKKGFGQD 1249
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK- 384
I+ ++NE F +D +K+ + + T +DL+ +I ++ ES++
Sbjct: 1250 IIINSNETNA----------FELDRLDMDGIKEEEV-KATREGQDLVLII-KETEESIRI 1297
Query: 385 -HFYEFGLSEGRDITFD 400
++ +G S I FD
Sbjct: 1298 QDYFTYGSSAISKIKFD 1314
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 251 SSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+I G E+ I + ++V G G D + GN+ ++VF+ +GND GSSG DT
Sbjct: 359 STIEGTEEIDKIVAFSNFNTIVNGKGGEDTISGNNGDDVFYGGTGNDTLSGSSGSDTL 416
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 251 SSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+I G E+ I + ++V G G D + GN+ ++VF+ +GND GSSG DT
Sbjct: 568 STIEGTEEIDKIVAFSNFNTIVNGKGGEDTISGNNGDDVFYGGTGNDTLSGSSGSDTL 625
>gi|291281394|ref|YP_003498212.1| hypothetical protein G2583_0601 [Escherichia coli O55:H7 str. CB9615]
gi|290761267|gb|ADD55228.1| hypothetical protein G2583_0601 [Escherichia coli O55:H7 str. CB9615]
Length = 6925
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 225 SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+GG D++D L GV T + SS + T IE + GS+ ND++ G+
Sbjct: 6726 NGGMDVVDFRLSTVGV-------TANLSSTAAQATGFNTSTFTNIEGISGSNFNDILTGS 6778
Query: 284 SANNVFFESSGNDVFD-GSSGLDTFFY 309
S +N GND + G+ G DT Y
Sbjct: 6779 SGDNQLEGRGGNDTLNIGNGGHDTLLY 6805
>gi|87198748|ref|YP_496005.1| glycosyl transferase family protein [Novosphingobium
aromaticivorans DSM 12444]
gi|87134429|gb|ABD25171.1| glycosyl transferase, family 2 [Novosphingobium aromaticivorans DSM
12444]
Length = 680
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ YL Y D++++ + A HY+ G + GRNP F Y+ ++
Sbjct: 17 FDADWYLAEYPDVQSL----QMPPAVHYLWLGARLGRNPSPRFSTRSYLDAN-------- 64
Query: 542 DAPDLVQAGKD---HFSNFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSDRS 588
PD+ QAG + HF G +EGRS I P T D + FG R
Sbjct: 65 --PDVAQAGINPLLHFLLAGRDEGRSGTILAAPSRGSTETDVNASTFGEHRP 114
>gi|396666|emb|CAA68613.1| unnamed protein product [Bordetella pertussis 18323]
Length = 1706
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+ VGS+ +DV+IG++ NV +GNDV G +G D
Sbjct: 1524 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLL 1564
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ ++G +GND + GN+ +N SG+D DG +G DT
Sbjct: 1010 VQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLV 1050
>gi|304394329|ref|ZP_07376252.1| heme peroxidase [Ahrensia sp. R2A130]
gi|303293769|gb|EFL88146.1| heme peroxidase [Ahrensia sp. R2A130]
Length = 1955
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+SGN+ ++G+ + +GND+ G +G+DT LY + + +IV A
Sbjct: 1752 ITGNSGNNFLLGHDGADTLIGGAGNDILGGGAGIDTMIGGLGDDLYSVTESAD-VIVELA 1810
Query: 331 NEHKQD 336
E QD
Sbjct: 1811 GEGTQD 1816
>gi|326672700|ref|XP_001342721.4| PREDICTED: matrix metalloproteinase-21-like [Danio rerio]
Length = 599
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 51/197 (25%)
Query: 45 TELNPNAQE-VARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYV------CTPRYD-- 95
++L+ Q+ + R A WS++ L F E +HS ++ I G+ C+ R+D
Sbjct: 213 SQLSIQEQKYIFRLAFRMWSEISPLQFIE-DLHSPLENIDIRLGFGTGRHLGCSQRFDGA 271
Query: 96 ------SRYFMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMH---PGSYNGGYP 145
+ + +I+FD + + G G L A+HEIGH LGL H PGS
Sbjct: 272 GREFAHAWFLGDIHFDDDEHFTVPNTGSGISLLKVAVHEIGHVLGLPHIYRPGSI----- 326
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ ++PQD+ + + D ++Q++YG G
Sbjct: 327 ----------------MQPSYLPQDAGFEIDW--------MDRKSIQRLYGVCTGRFSTV 362
Query: 206 IYKIEVQQKDSPFIQTI 222
I +Q +P+ + +
Sbjct: 363 FDWIRKEQ--TPYGEVV 377
>gi|307150972|ref|YP_003886356.1| C-type lectin domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981200|gb|ADN13081.1| C-type lectin domain protein [Cyanothece sp. PCC 7822]
Length = 860
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + T +S++G+ +++ GN ++ F SSGND +G +G+DT Y + + +
Sbjct: 612 VNVTGTTQTDSIIGNEAANLIDGNEGDDTFVGSSGNDTLEGGAGIDTLDYSSFTEAITLL 671
Query: 320 R 320
R
Sbjct: 672 R 672
>gi|240142070|ref|YP_002966580.1| hypothetical protein MexAM1_META2p0382 [Methylobacterium extorquens
AM1]
gi|240012014|gb|ACS43239.1| Hypothetical protein MexAM1_META2p0382 [Methylobacterium extorquens
AM1]
Length = 448
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 199 KGSLGNNIYKIE-----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G GN+IY ++ V + I + + L TL V+ L +++ +
Sbjct: 2 AGGAGNDIYYVDAASDTVSEAAGAGIDEVRTT----LASYTLGANVEYLSYLGAGAFTGV 57
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G NM + + +S+ G +GNDV G + N+ FF +G+D +G G DT Y A +
Sbjct: 58 GNSLDNM-LTGNGGNDSLTGGAGNDVYYGLAGNDFFFGGAGSDAHNGGDGFDTVDYSAAT 116
Query: 314 YLYKIYRF 321
++ F
Sbjct: 117 QSVRVDLF 124
>gi|86356373|ref|YP_468265.1| metallopeptidase protein [Rhizobium etli CFN 42]
gi|86280475|gb|ABC89538.1| probable metallopeptidase protein [Rhizobium etli CFN 42]
Length = 329
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 31/143 (21%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY--FMP 168
R+G G L+H E+GHALGL H ++ GG V DS ++M+Y F+
Sbjct: 148 RFGNYAGQTLAH----ELGHALGLKH--AHEGGTVV-----PSAYDSLEYTIMTYHTFIG 196
Query: 169 QDSMMDASF---GYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ----------- 213
D A + G T M+ DI A+Q++YGA + G+ +Y+ Q
Sbjct: 197 DDE-SGAKYEQNGAPQTFMMLDIAALQEMYGADYTTNSGDTVYRWNPNQGITYVNGVAAI 255
Query: 214 --KDSPFIQTIYDSGGDDLLDLT 234
+ TI+D GG D DL+
Sbjct: 256 TPAANRVFATIWDGGGTDTYDLS 278
>gi|35505497|gb|AAH57788.1| Matrix metallopeptidase 11 (stromelysin 3) [Homo sapiens]
Length = 488
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 22/126 (17%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS----------- 77
R++ LT L F + ++ AL WS V LTF T +H
Sbjct: 104 RWEKTDLTYRILRFPWQLVQEQVRQTMAEALKVWSDVTPLTF--TEVHEGRADIMIDFAR 161
Query: 78 -----DIKFISSNNGYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGH 130
D+ F G + + + E ++FD + W G +GT L A HE GH
Sbjct: 162 YWHGDDLPF--DGPGGILAHAFSPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGH 219
Query: 131 ALGLMH 136
LGL H
Sbjct: 220 VLGLQH 225
>gi|85703937|ref|ZP_01035040.1| calcium binding hemolysin protein, putative [Roseovarius sp. 217]
gi|85671257|gb|EAQ26115.1| calcium binding hemolysin protein, putative [Roseovarius sp. 217]
Length = 1708
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT--VIESVVGSSGNDVVIGNSAN 286
D ++ GGV DL W G N+ + +++++ GND ++G N
Sbjct: 301 DTVESAFFGGVVGEADLGPTGW---GNDVGNVLVGDDGDDILDAL---DGNDTILGGGGN 354
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+V +G+D+ +G +G D F++ A Y++ R
Sbjct: 355 DVIIAGAGSDLLNGGAGDDLFYFGASFTEYELLR 388
>gi|238797466|ref|ZP_04640965.1| serine protease [Yersinia mollaretii ATCC 43969]
gi|238718737|gb|EEQ10554.1| serine protease [Yersinia mollaretii ATCC 43969]
Length = 1817
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEH 333
G D + GN N+V G+ + DG G++ + Y + R EN V D A
Sbjct: 728 GVDRIFGNKRNDVIVAGKGDALIDGGGGINVVVLHGSYADYTLTRTENGYQVKDKVAGRD 787
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSIL 362
L ++++L FAD I +V++ +I+
Sbjct: 788 GTLTLKNIQKLDFAD--ISAVDLGANTII 814
>gi|300863875|ref|ZP_07108796.1| hypothetical protein OSCI_380004 [Oscillatoria sp. PCC 6506]
gi|300338118|emb|CBN53942.1| hypothetical protein OSCI_380004 [Oscillatoria sp. PCC 6506]
Length = 717
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 191 VQKIYGAPK----GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDL 245
+ +I G P+ G L + +Q+ D TI + G+D ++ GG +N +ID
Sbjct: 1 MAEIIGTPQADSIGGLPEDDRIFGLQEND-----TISGNSGND----SIYGGKENDFIDG 51
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N+ S S G + N T+ + +S+ G GND++ GNS ++V F G D G G D
Sbjct: 52 NSGSDSLFGDLD-NDTVNGNEDNDSIYGGRGNDLLAGNSGSDVLFGDRGADNLTGGEGAD 110
Query: 306 TFFY--YA---PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVN---V 356
F YA PS +A ++ D ++ D + L FAD +D+ N +
Sbjct: 111 VFVLTRYADGGPSLTSGGLSLADADVINDFTDN-LDLIGLSGGLTFADLNLVDAGNNTFI 169
Query: 357 KQRSILEYTA 366
+ R E+ A
Sbjct: 170 QDRVTGEFLA 179
>gi|163760942|ref|ZP_02168020.1| iron-regulated protein FrpC [Hoeflea phototrophica DFL-43]
gi|162281723|gb|EDQ32016.1| iron-regulated protein FrpC [Hoeflea phototrophica DFL-43]
Length = 2334
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ ++E + D G G D+LD+ GGV + T S + + G
Sbjct: 2114 GGAGNDTLRLESGAD-------VLDGGDGHDVLDIWSSGGVTVNLATGTVSGTGVNG--- 2163
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
T++ IE V G GND++ G+SA + +GND G +G D +
Sbjct: 2164 -TTVSG---IEEVWGGDGNDILTGSSAAETLYGDNGNDTISGGAGDDNLY 2209
>gi|310780056|ref|YP_003968388.1| CoA-substrate-specific enzyme activase [Ilyobacter polytropus DSM
2926]
gi|309749379|gb|ADO84040.1| CoA-substrate-specific enzyme activase [Ilyobacter polytropus DSM
2926]
Length = 254
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
P + ++Y Q K FI + D GG D+ + + G+ +DLN + +S G Y
Sbjct: 76 TPINEIKAHVYGASFQSKLKNFI--LLDIGGQDVKVVKVEKGISTDLDLNDKCAASCGRY 133
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+NM T +E + N V + NS VF ES
Sbjct: 134 LENMCAVLETPLEELSKHHENPVEL-NSTCAVFSES 168
>gi|299069584|emb|CBJ40856.1| putative hemagglutinin/hemolysin-related protein [Ralstonia
solanacearum CMR15]
Length = 3427
Score = 37.7 bits (86), Expect = 6.6, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 200 GSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK----------NYIDLN 246
G LG N + + +Q DS + + ++G LL+++L+G + N
Sbjct: 3189 GLLGINASLLSSVTIQATDSTSLSSTANAG--QLLNVSLLGTTQPTAIIEGTSGNDTLTG 3246
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + GY T+ + + G +GNDV+ G N++ +GND G +G D
Sbjct: 3247 TSGNDRLYGYAGADTLNGGAGNDLLRGGAGNDVLNGGDGNDILIGGAGNDTLTGGAGGDI 3306
Query: 307 FFY 309
F +
Sbjct: 3307 FLW 3309
>gi|254421352|ref|ZP_05035070.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196188841|gb|EDX83805.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 792
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+VG +GND +IG N+ GNDV G SG DTF
Sbjct: 690 LVGGTGNDTLIGGVGNDTLIGGQGNDVLTGGSGRDTF 726
>gi|300866869|ref|ZP_07111544.1| hypothetical protein OSCI_3150008 [Oscillatoria sp. PCC 6506]
gi|300335119|emb|CBN56704.1| hypothetical protein OSCI_3150008 [Oscillatoria sp. PCC 6506]
Length = 830
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 90/231 (38%), Gaps = 47/231 (20%)
Query: 399 FDSYLYLGSYDDL---------RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS 448
FD YL Y + RN F H+ G EG NP A F Y+A
Sbjct: 619 FDESFYLAQYPQVAAAVANKTFRNGF--------EHFALFGQYEGLNPSAKFDNQLYLAL 670
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN----VFGSDRG 504
+ D+ ++ + + G DHF G +GR LY SY +N F S++
Sbjct: 671 NPDVAEQVSNG--VFRSGFDHFIKRGEFQGRD---PRNLYNESYYLEQNSGVATFLSEKK 725
Query: 505 --AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
+ H+I G EGR F ++ + A A A L +G +HF+ G EG
Sbjct: 726 FRSGYEHFILFGQFEGRKGSPFFDEQFYLEQNPKV-AEAVASGLFSSGYEHFTKVGQFEG 784
Query: 563 RSITF----------NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
RS + NPD+ + ++ + +H++ G +E R
Sbjct: 785 RSPSTLVNEVSYLRDNPDVAVAVKAGVY-------QSGIEHFVLFGQRENR 828
>gi|237747940|ref|ZP_04578420.1| predicted protein [Oxalobacter formigenes OXCC13]
gi|229379302|gb|EEO29393.1| predicted protein [Oxalobacter formigenes OXCC13]
Length = 2138
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G GND+++G S +++ G+DV G SG DTF Y+
Sbjct: 1977 GGEGNDILLGGSGDDILVGGKGDDVLAGGSGHDTFQYH 2014
>gi|119484508|ref|ZP_01619125.1| hypothetical protein L8106_02282 [Lyngbya sp. PCC 8106]
gi|119457982|gb|EAW39105.1| hypothetical protein L8106_02282 [Lyngbya sp. PCC 8106]
Length = 1880
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 9/49 (18%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFF 308
++V G +GNDV++G N+V F S+GND V DG G DT F
Sbjct: 1609 DTVDGGNGNDVILGGKNNDVIFGSAGNDELNGNLGDDVVDGGEGADTVF 1657
>gi|149030869|gb|EDL85896.1| matrix metallopeptidase 24 [Rattus norvegicus]
Length = 514
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 73/198 (36%), Gaps = 70/198 (35%)
Query: 38 HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--------SDIKFISSNNGYV 89
H + + EL+ ++ R A W KV LTFEE H +DI ++ +
Sbjct: 21 HNYTPKVGELD--TRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHG 78
Query: 90 CTPRYDSR-------YFM------EINFDKADVWRYGIGK--GTILSHNALHEIGHALGL 134
+ +D YF + +FD + W G G L A+HE+GHALGL
Sbjct: 79 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGL 138
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF----------MPQDSMMDASFGYCATPM 184
H ND +++M+ F +PQD
Sbjct: 139 EH-----------------SNDP--SAIMAPFYQYMETHNFKLPQD-------------- 165
Query: 185 VSDIVAVQKIYGAPKGSL 202
D+ +QKIYG P L
Sbjct: 166 --DLQGIQKIYGPPAEPL 181
>gi|73955222|ref|XP_854594.1| PREDICTED: similar to Macrophage metalloelastase precursor (HME)
(Matrix metalloproteinase-12) (MMP-12) (Macrophage
elastase) (ME) [Canis familiaris]
Length = 601
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 20/122 (16%)
Query: 34 VLTTHRLSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEET-SIHSDIKFISSNNG 87
V H +++ I P+ Q A WS V L F + S +DI + ++
Sbjct: 240 VWKKHLITYRINNYTPDMQPADVDYAIHKAFEVWSNVTPLKFRKVNSGEADIMILFASRA 299
Query: 88 YVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ +D R + +++FD+A++W KGT L A+HE+GH+LGL
Sbjct: 300 HGDFSPFDGRGGVIAHAFGPGPQIGGDMHFDEAEIWTKTY-KGTNLFLVAVHELGHSLGL 358
Query: 135 MH 136
H
Sbjct: 359 GH 360
>gi|91776789|ref|YP_546545.1| hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
gi|91710776|gb|ABE50704.1| Hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
Length = 1286
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 19/180 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--------KIY 319
I+ + G SGND +IGN NN+ +GND G G DT + A + +Y
Sbjct: 858 IDHLTGGSGNDTLIGNDGNNILRGGAGNDSIFGGGGNDTIYGGAGADTIDGGTGNNTAVY 917
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE---DLIQVIG 376
+ + D + DV I + + R+ TAS E D++ I
Sbjct: 918 TSSVLVSLTDGLLRTTNTNGDV----LGSGTIVNGGIAGRATGGSTASDEAFGDVLTNIQ 973
Query: 377 QDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
E Y G S+ +T D+ +G D L GS A + + GVK
Sbjct: 974 NLTVEGSGSSYLIGNSQANRLTGGSGNDTLEGIGGGDTLDGGSGSGTDTATYVHASAGVK 1033
>gi|39732|emb|CAA32411.1| cyaA [Bordetella pertussis]
Length = 218
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+ VGS+ +DV+IG++ NV +GNDV G +G D
Sbjct: 36 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLL 76
>gi|15800218|ref|NP_286230.1| RTX family exoprotein [Escherichia coli O157:H7 EDL933]
gi|12513368|gb|AAG54838.1|AE005229_1 putative RTX family exoprotein [Escherichia coli O157:H7 str. EDL933]
Length = 5188
Score = 37.7 bits (86), Expect = 7.0, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 225 SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+GG D++D L GV T + SS + T IE + GS+ ND++ G+
Sbjct: 4989 NGGMDVVDFRLSTVGV-------TANLSSTAAQATGFNTSTFTNIEGISGSNFNDILTGS 5041
Query: 284 SANNVFFESSGNDVFD-GSSGLDTFFY 309
S +N GND + G+ G DT Y
Sbjct: 5042 SGDNQLEGRGGNDTLNIGNGGHDTLLY 5068
>gi|168760354|ref|ZP_02785361.1| large repetitive protein [Escherichia coli O157:H7 str. EC4501]
gi|217324980|ref|ZP_03441064.1| FG-GAP repeat domain protein [Escherichia coli O157:H7 str. TW14588]
gi|189369040|gb|EDU87456.1| large repetitive protein [Escherichia coli O157:H7 str. EC4501]
gi|217321201|gb|EEC29625.1| FG-GAP repeat domain protein [Escherichia coli O157:H7 str. TW14588]
Length = 5188
Score = 37.7 bits (86), Expect = 7.1, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 225 SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+GG D++D L GV T + SS + T IE + GS+ ND++ G+
Sbjct: 4989 NGGMDVVDFRLSTVGV-------TANLSSTAAQATGFNTSTFTNIEGISGSNFNDILTGS 5041
Query: 284 SANNVFFESSGNDVFD-GSSGLDTFFY 309
S +N GND + G+ G DT Y
Sbjct: 5042 SGDNQLEGRGGNDTLNIGNGGHDTLLY 5068
>gi|320192908|gb|EFW67548.1| hypothetical protein ECoD_00155 [Escherichia coli O157:H7 str.
EC1212]
Length = 5188
Score = 37.7 bits (86), Expect = 7.1, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 225 SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+GG D++D L GV T + SS + T IE + GS+ ND++ G+
Sbjct: 4989 NGGMDVVDFRLSTVGV-------TANLSSTAAQATGFNTSTFTNIEGISGSNFNDILTGS 5041
Query: 284 SANNVFFESSGNDVFD-GSSGLDTFFY 309
S +N GND + G+ G DT Y
Sbjct: 5042 SGDNQLEGRGGNDTLNIGNGGHDTLLY 5068
>gi|262199338|ref|YP_003270547.1| peptidase M12A astacin [Haliangium ochraceum DSM 14365]
gi|262082685|gb|ACY18654.1| peptidase M12A astacin [Haliangium ochraceum DSM 14365]
Length = 615
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 124 ALHEIGHALGLMHPGSYNGGYPVY-----GVDNDYE-NDSFLTSVMSYFMPQDSMMDASF 177
A+HE GHALG H + + P + G D D D L SVM+Y P ++
Sbjct: 167 AVHEFGHALGFAHEQNRS-DTPAWCDAEQGSDGDAVIGDWDLESVMNYCNP-------AW 218
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+DI VQ+IYG PK L Y + ++T+ D GD L D+ G
Sbjct: 219 NGNGALSTTDIRGVQQIYG-PKLQLDQFGYNTGSGWRVEKHVRTMADVNGDGLDDVVGFG 277
Query: 238 GVKNYIDLN 246
++ L+
Sbjct: 278 DSGVWVSLS 286
>gi|168798055|ref|ZP_02823062.1| large repetitive protein [Escherichia coli O157:H7 str. EC508]
gi|189379302|gb|EDU97718.1| large repetitive protein [Escherichia coli O157:H7 str. EC508]
gi|326345968|gb|EGD69707.1| hypothetical protein ECF_00795 [Escherichia coli O157:H7 str. 1125]
Length = 5188
Score = 37.7 bits (86), Expect = 7.1, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 225 SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+GG D++D L GV T + SS + T IE + GS+ ND++ G+
Sbjct: 4989 NGGMDVVDFRLSTVGV-------TANLSSTAAQATGFNTSTFTNIEGISGSNFNDILTGS 5041
Query: 284 SANNVFFESSGNDVFD-GSSGLDTFFY 309
S +N GND + G+ G DT Y
Sbjct: 5042 SGDNQLEGRGGNDTLNIGNGGHDTLLY 5068
>gi|15829796|ref|NP_308569.1| hypothetical protein ECs0542 [Escherichia coli O157:H7 str. Sakai]
gi|13360000|dbj|BAB33965.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|326341256|gb|EGD65048.1| Large repetitive protein [Escherichia coli O157:H7 str. 1044]
Length = 5291
Score = 37.7 bits (86), Expect = 7.1, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 225 SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+GG D++D L GV T + SS + T IE + GS+ ND++ G+
Sbjct: 5092 NGGMDVVDFRLSTVGV-------TANLSSTAAQATGFNTSTFTNIEGISGSNFNDILTGS 5144
Query: 284 SANNVFFESSGNDVFD-GSSGLDTFFY 309
S +N GND + G+ G DT Y
Sbjct: 5145 SGDNQLEGRGGNDTLNIGNGGHDTLLY 5171
>gi|224117234|ref|XP_002317515.1| predicted protein [Populus trichocarpa]
gi|222860580|gb|EEE98127.1| predicted protein [Populus trichocarpa]
Length = 1095
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
IT +EG + + A + + + +++F P Q +D F+ GYEEGRS+ FN
Sbjct: 478 ITENNREGEKVEHWGAFQSLLMQDRYLDSFGIEPHPPQVHRDDFTAKGYEEGRSLEFN 535
>gi|163815758|ref|ZP_02207129.1| hypothetical protein COPEUT_01938 [Coprococcus eutactus ATCC 27759]
gi|158448899|gb|EDP25894.1| hypothetical protein COPEUT_01938 [Coprococcus eutactus ATCC 27759]
Length = 1746
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS---YLYKIYRFENAIIV 327
+ G +GND V G + N+V SGND DG + DT +Y +PS K +N I+
Sbjct: 1288 ISGGAGNDYVSGGAGNDVVISQSGNDFIDGGADDDT-YYISPSCGTVTIKDTEGKNTIVC 1346
Query: 328 YDANEHKQ 335
D E +
Sbjct: 1347 ADGLESTK 1354
>gi|147883920|gb|ABQ52218.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis]
Length = 1225
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IE+ VGS+ +DV+IG++ NV +GNDV G +G D
Sbjct: 1043 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLL 1083
>gi|114763232|ref|ZP_01442656.1| hypothetical protein 1100011001311_R2601_04713 [Pelagibaca
bermudensis HTCC2601]
gi|114544030|gb|EAU47040.1| hypothetical protein R2601_04713 [Roseovarius sp. HTCC2601]
Length = 949
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE--------- 291
+ IDL+ S S I G + + I IE+ G G+D ++G +N+
Sbjct: 537 SLIDLSGASASEIAGVK--LKIGVPDSIENAFGGDGDDTLVGTDGDNLLSGGRGDDSLHY 594
Query: 292 SSGNDVFDGSSGLDTFFYYAPS 313
SSGND DG +G+DT A S
Sbjct: 595 SSGNDTIDGGAGVDTLRIAALS 616
>gi|332019904|gb|EGI60365.1| Matrix metalloproteinase-14 [Acromyrmex echinatior]
Length = 513
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 18/118 (15%)
Query: 37 THRLSFDITELNP--NAQEVARW---ALGEWSKVVDLTFEETS----IHSDIKFISSNNG 87
T L++ I++ N QEV + A W+ DLTF + +H +I+F +G
Sbjct: 126 TKNLTYKISKYPTGLNKQEVEKEIANAFSVWTGETDLTFTRKTGHENVHIEIRFEVGEHG 185
Query: 88 ---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
Y Y + +FD ++ W +GT L A HE GH+LGL H
Sbjct: 186 DGDPFDGPGGTLAHAYFPVYGGDAHFDDSERWTIRSYRGTNLFQVAAHEFGHSLGLSH 243
>gi|114763217|ref|ZP_01442641.1| putative calcium binding hemolysin protein [Pelagibaca bermudensis
HTCC2601]
gi|114544015|gb|EAU47025.1| putative calcium binding hemolysin protein [Roseovarius sp.
HTCC2601]
Length = 1060
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G+DV+ GN+ +NV + SG D F G +G DTF ++ E I+ D + +
Sbjct: 384 TGDDVLTGNALDNVIYGGSGFDQFTGGAGADTF---------RVIHGEGNKIITDFDPGE 434
Query: 335 QDFLSDVERLRFADQCIDSVNVKQ 358
D L +E FAD + Q
Sbjct: 435 GDTLV-LEGFNFADSAAALATLTQ 457
>gi|291614062|ref|YP_003524219.1| outer membrane adhesin like proteiin [Sideroxydans lithotrophicus
ES-1]
gi|291584174|gb|ADE11832.1| outer membrane adhesin like proteiin [Sideroxydans lithotrophicus
ES-1]
Length = 3778
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES------------WSSIGG 255
IE+ D+ IQT+ + G LD+ + G + + TE SI G
Sbjct: 991 TIEIGAPDNLAIQTLQFADGS-TLDVNTLVGQQTLTQVGTEGNDVLTGSDSIMFRDSIQG 1049
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ T+ +++ G +GND + G S N++ +GND G G DT+ Y
Sbjct: 1050 LGGDDTLYGGAGGDTLDGGAGNDTLYGQSGNDILIGGTGNDTLSGGGGNDTYVY 1103
>gi|163739110|ref|ZP_02146522.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161387510|gb|EDQ11867.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 307
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T++ +GGDD+L GGV + +GG N + ++G SG+D +
Sbjct: 165 TLHGNGGDDVLR----GGVGRDVIFGGVGADLLGGGRGN---------DRLIGGSGSDTI 211
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
G + + + +G+DV G G D F + + +I FE +
Sbjct: 212 RGGAGVDRLYGGTGDDVMTGGDGADIFVFNEGDHTDRITDFEVGV 256
>gi|307720204|ref|YP_003891344.1| Lipopolysaccharide biosynthesis protein [Sulfurimonas autotrophica
DSM 16294]
gi|306978297|gb|ADN08332.1| Lipopolysaccharide biosynthesis protein [Sulfurimonas autotrophica
DSM 16294]
Length = 620
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 8/54 (14%)
Query: 385 HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGR 435
H+ ++G EGR+ + FD+ YL +Y+D++ ++G HYI HG EGR
Sbjct: 42 HYIKYGADEGRNPSDKFDTSFYLSTYNDVK-----EKGVNPLAHYILHGKNEGR 90
>gi|281351325|gb|EFB26909.1| hypothetical protein PANDA_021651 [Ailuropoda melanoleuca]
Length = 505
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 101 EINFDKADVWRYGI--GKGTILSHNALHEIGHALGLMHPGSYN 141
+ +FD + W YG G+GT L A+HE GHALGL H + N
Sbjct: 175 DTHFDDEETWTYGSKDGEGTDLFAVAVHEFGHALGLGHSSAPN 217
>gi|15839348|ref|NP_300036.1| hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
gi|9108001|gb|AAF85544.1|AE004081_16 hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1296
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G +M I + T + ++G GND + G S ++ +GND +G +G DT+ +
Sbjct: 633 LGTSGNDMIIGEVTGNDVLIGKGGNDTLQGGSGDDTLDGGTGNDTLNGGAGNDTYRFAIG 692
Query: 313 SYLYKIY 319
+ + IY
Sbjct: 693 AGVDSIY 699
>gi|329849046|ref|ZP_08264074.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844109|gb|EGF93678.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1034
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY----APSYLYKIYRFENA 324
++V G +GNDVV G+S N++ GND GS G DT Y S ++ +N
Sbjct: 569 DTVTGGAGNDVVWGDSGNDLLVGGVGNDTIVGSVGNDTASYADAASGVSVDLSLFDTQNT 628
Query: 325 IIVYDANEHKQDFLSDVERL 344
+ +D LS VE L
Sbjct: 629 L------GAGEDRLSSVENL 642
>gi|212702323|ref|ZP_03310451.1| hypothetical protein DESPIG_00334 [Desulfovibrio piger ATCC 29098]
gi|212674201|gb|EEB34684.1| hypothetical protein DESPIG_00334 [Desulfovibrio piger ATCC 29098]
Length = 1151
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ GND + G + ++V F SGND DG G D F A N IIVYD N++
Sbjct: 972 TDGNDQLFGGAGDDVIFGGSGNDFIDGGEGEDAIFGGAG----------NDIIVYDNNDY 1021
>gi|254422212|ref|ZP_05035930.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196189701|gb|EDX84665.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 662
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 253 IGGY-EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
IGGY +N + E++ G+ GNDV+IG++ + +GND DG G DT F
Sbjct: 460 IGGYGSENYVVFGAAKSETLTGTDGNDVLIGDTGKDTLDGKAGNDFLDGDEGDDTLF 516
>gi|307688161|ref|ZP_07630607.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 1383
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S++G +GND ++G N++ +G+D +G G DT + +YK + I+
Sbjct: 429 DSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGGIGNDTLIGGYGTDIYKFKKGFGQDIII 488
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HF 386
++NE F +D +K+ + + T +DL+ +I ++ ES++ +
Sbjct: 489 NSNETNA----------FELDRLDMDGIKEEEV-KATREGQDLVLII-KETEESIRIQDY 536
Query: 387 YEFGLSEGRDITFD 400
+ +G S I FD
Sbjct: 537 FTYGSSAISKIKFD 550
>gi|301792043|ref|XP_002930989.1| PREDICTED: matrix metalloproteinase-25-like [Ailuropoda
melanoleuca]
Length = 533
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 101 EINFDKADVWRYGI--GKGTILSHNALHEIGHALGLMHPGSYN 141
+ +FD + W YG G+GT L A+HE GHALGL H + N
Sbjct: 199 DTHFDDEETWTYGSKDGEGTDLFAVAVHEFGHALGLGHSSAPN 241
>gi|217978852|ref|YP_002362999.1| glycosyl transferase family 2 [Methylocella silvestris BL2]
gi|217504228|gb|ACK51637.1| glycosyl transferase family 2 [Methylocella silvestris BL2]
Length = 756
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 412 RNVFGSDRGAAAR-HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
R G+ RG H+I +G+ P ++ +H PD+++ G D F
Sbjct: 103 RKSAGALRGLTPLGHFIAYGLPCNATPTPLFDRDWYLAHN---------PDVMRAGFDPF 153
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA-RHYITHGVKEGRNP-DAFKALE 528
+F R L+ + ++N D G RHY++ G EGR P D F +
Sbjct: 154 LHFVASGARDGRSPGPLFDAPWYRMKNPGVRDAGVEPLRHYLSRGAAEGRRPHDGFDPVF 213
Query: 529 YIA 531
Y+A
Sbjct: 214 YVA 216
>gi|126659167|ref|ZP_01730306.1| outer membrane secretion protein [Cyanothece sp. CCY0110]
gi|126619574|gb|EAZ90304.1| outer membrane secretion protein [Cyanothece sp. CCY0110]
Length = 532
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G N T+A +++ G++GND++ G++ N++ +GND+ +G +G DT
Sbjct: 343 GKSGNDTLAGGAGNDTLNGAAGNDILTGDAGNDILNGGTGNDILNGGAGNDTL 395
>gi|73959405|ref|XP_547166.2| PREDICTED: similar to matrix metalloproteinase 25 preproprotein
[Canis familiaris]
Length = 761
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 101 EINFDKADVWRYGI--GKGTILSHNALHEIGHALGLMHPGSYN 141
+ +FD + W YG G+GT L A+HE GHALGL H + N
Sbjct: 192 DTHFDDEETWTYGSKDGEGTDLFAVAVHEFGHALGLGHSSAPN 234
>gi|126728313|ref|ZP_01744129.1| hypothetical protein SSE37_20022 [Sagittula stellata E-37]
gi|126711278|gb|EBA10328.1| hypothetical protein SSE37_20022 [Sagittula stellata E-37]
Length = 364
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDS--GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+G LG++ K E Q +D D+ GG L D T+ G N + L E + G
Sbjct: 190 EGGLGDDWMKGE-QGRDLMLGGEGNDTIEGG--LDDDTMDGEAGNDLMLGGEGDDWMKGE 246
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ + + + G +G D + G N+ F +G+D+ G G D F + S
Sbjct: 247 DGNDTMDGESGNDLIEGGAGADWLKGEGGNDTLFGGAGDDLLVGGDGADVFVFAQESGFD 306
Query: 317 KIYRFENAI 325
+ F++ I
Sbjct: 307 IVADFQDGI 315
>gi|113475313|ref|YP_721374.1| hypothetical protein Tery_1623 [Trichodesmium erythraeum IMS101]
gi|110166361|gb|ABG50901.1| hypothetical protein Tery_1623 [Trichodesmium erythraeum IMS101]
Length = 613
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
E SI G E+N +I + +S+ G+ GND + GN N+ F + GND + +SG DT
Sbjct: 378 EGNDSIFGNEENDSIFGNEGNDSIFGNEGNDSIFGNEGNDSIFGNQGNDCLESNSGDDTI 437
>gi|209528197|ref|ZP_03276666.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491363|gb|EDZ91749.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 1313
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++++GS G+D + GN N+ +G+D G G DTF Y +P+ +
Sbjct: 1025 DTLIGSDGDDSLFGNLGNDCLIGGAGDDTLVGGEGSDTFAYLSPNQI 1071
>gi|71908812|ref|YP_286399.1| VCBS [Dechloromonas aromatica RCB]
gi|71848433|gb|AAZ47929.1| VCBS protein [Dechloromonas aromatica RCB]
Length = 4854
Score = 37.4 bits (85), Expect = 7.9, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ G D+L GG+ N I + G + + T++ T + + GS+GND +
Sbjct: 4649 TLSGGAGHDILQ----GGLGNDILSGDSGDDVLDGGDGSDTLSGGTGNDYLKGSAGNDTL 4704
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF 307
G N+V +GND+ G G DTF
Sbjct: 4705 DGGDGNDVLVGGAGNDMLTGGLGADTF 4731
>gi|326671556|ref|XP_003199461.1| PREDICTED: matrix metalloproteinase-19-like [Danio rerio]
Length = 417
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 21/115 (18%)
Query: 40 LSFDITELNPN-----AQEVARWALGEWSKVVDLTFEETSIH---SDIKFISSNNGYVCT 91
L++ I P+ Q R A WS V L+F E IH +DI+ IS + C
Sbjct: 55 LTYRIYNYTPDMGKSATQTAIRTAFKYWSDVTPLSFTE--IHFGTADIR-ISFHKRDGCP 111
Query: 92 PRYDSRYFME----------INFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D + ++FD+ + W G G+ L A HEIGHALGL H
Sbjct: 112 SPFDGPGHVLAHAEAPPSGIVHFDEDEFWTEGKYYGSNLRIVAAHEIGHALGLGH 166
>gi|172038407|ref|YP_001804908.1| glycerophosphoryl diester phosphodiesterase [Cyanothece sp. ATCC
51142]
gi|171699861|gb|ACB52842.1| glycerophosphoryl diester phosphodiesterase [Cyanothece sp. ATCC
51142]
Length = 1976
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 34/145 (23%)
Query: 177 FGYCATPMVSDIVAVQKIYGAP-------KGSLGNNIYKIEVQQKDSPFI---QTIYDSG 226
GY T S V ++ P +GS G +++ E DS FI Q ++
Sbjct: 1779 IGYAPTAENSVTVTIEDTSVEPIEVPSMVRGSAGADVFDTE-DPGDSGFIGDNQLLFAGS 1837
Query: 227 GDDLLDLTLI-GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GDD +D+T GG ++ IDL + + ++ + N+ +I S
Sbjct: 1838 GDDFVDVTFAPGGDRSRIDLGSG--------------------DDIIFAGSNNRIIAGSG 1877
Query: 286 NNVFFESSG--NDVFDGSSGLDTFF 308
+++ F SG N+V G SG+D F+
Sbjct: 1878 DDILFLGSGEGNNVVTGGSGMDQFW 1902
>gi|269959633|ref|ZP_06174013.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835556|gb|EEZ89635.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 236
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G GND++ G S ++ GND+ G G DT F Y+ + ++ ++V
Sbjct: 57 DTLLGGRGNDLLSGGSGDDYLSGGLGNDLLFGGCGDDTIFDYSGNNFINAGWGDDTVVVG 116
Query: 329 D-----ANEHKQDFLSDVERLRFA--DQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDV 379
D A D RL DQ + S +++ +S IL++ ++ L+ +G D
Sbjct: 117 DGHSVIAGGCGDDTFVMTNRLAVGVPDQPVSSNDIEVKSEILDFNICHDKLVFDMGLDT 175
>gi|220926600|ref|YP_002501902.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
gi|219951207|gb|ACL61599.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
Length = 565
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ G +GND + G N+ + +GNDV G +G DTF + + S L
Sbjct: 431 LTGGAGNDQISGLGGNDALYGGAGNDVLTGGAGFDTFVFDSASVL 475
>gi|150377118|ref|YP_001313714.1| hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
gi|150031665|gb|ABR63781.1| Hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
Length = 574
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLI----------GGVKNYIDLNT 247
+G +GN+ Y ++ + DSG G D + T+ GGV+N + L T
Sbjct: 357 RGGIGNDTYFVD---NTGDIVDEAADSGAGTDTVQSTVSFNLGNTAVAKGGVENLVLLGT 413
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + G N T++ +T + G +GND + G N++ GND G +GLDTF
Sbjct: 414 GNINGTGNALNN-TLSGNTGNNTFSGFAGNDTIDGGLGNDLINGGLGNDSLTGGAGLDTF 472
Query: 308 FY 309
+
Sbjct: 473 NF 474
>gi|254426463|ref|ZP_05040178.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196187475|gb|EDX82442.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 300
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 264 QHTVIESV--VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
QH IE +G GNDV++GN +N+ SG+D+F G G D
Sbjct: 45 QHRYIEKTPFIGGEGNDVLVGNDKDNLMEGKSGDDIFIGREGSD 88
>gi|307155173|ref|YP_003890557.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306985401|gb|ADN17282.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 966
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 39/189 (20%)
Query: 201 SLGNNIYKI------EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGG-------VKNY 242
SLGNN+ K+ + + TI + +++LD TLIGG V N
Sbjct: 727 SLGNNLEKLILSGTSAINGTGNALNNTITGNSANNILDGSTGADTLIGGGGNDLYIVDNT 786
Query: 243 IDLNTESWSSIGGYE--------------KNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D+ TE+ + G + +N+T+ ++I G++ N+++ GNS NN
Sbjct: 787 GDIVTETSTLAGEIDTVQSSITYTLKANVENLTLTGTSLINGT-GNALNNIITGNSNNNT 845
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
++G+D+ G G DT + I R+ + D + F+ ++L F
Sbjct: 846 LTGNAGSDILIGGGGNDTLNLGLNDGVADIVRYT----LGDGVDVINQFVKGSDKLAFI- 900
Query: 349 QCIDSVNVK 357
I+S++VK
Sbjct: 901 -GINSLDVK 908
>gi|83765319|dbj|BAE55462.1| unnamed protein product [Aspergillus oryzae]
Length = 256
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 61 EWSKV-VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYF---MEINFDKADVWRYGIGK 116
EW+K+ + +TFE + D F+ S+ G T S YF ++NF + +
Sbjct: 112 EWNKLNIGVTFEFVPLAKDANFVLSHGGNKGT-VLASAYFPNNKDLNFVYVYSFAFQPDW 170
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
L HE+GH +GL H + N G P + D N+ SVM+Y +
Sbjct: 171 KPFLWRVFTHELGHVIGLRHEFAMNPG-PYFEGDAVQINERNPLSVMNYRREPPEIQQ-- 227
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGS 201
SD+ A +K Y P G+
Sbjct: 228 ---------SDVEATKKFYSFPAGT 243
>gi|114706018|ref|ZP_01438921.1| Glycerophosphoryl diester phosphodiesterase [Fulvimarina pelagi
HTCC2506]
gi|114538864|gb|EAU41985.1| Glycerophosphoryl diester phosphodiesterase [Fulvimarina pelagi
HTCC2506]
Length = 847
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+P + + GGDD++ G N + + G + + TI + + G S
Sbjct: 349 TPLVDVMDGRGGDDII----YGRESNDVIYGGSGNDRLIGGDGDDTIYGGAGNDILFGGS 404
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GNDV+ G +++ + G+DV DG +G DT + A
Sbjct: 405 GNDVLFGEDGDDILYGEEGDDVLDGGAGNDTLYGGA 440
>gi|224097714|ref|XP_002311050.1| predicted protein [Populus trichocarpa]
gi|222850870|gb|EEE88417.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFI------SSNNGYV----------CTPR 93
N + + A W++V + TF+E S+ S + N+G TP
Sbjct: 170 NIRSICAKAFQRWAQVTEFTFQEVSVSSPADIVIGFHRRDHNDGSAFDGPGGTLAHATPP 229
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTI-LSHNALHEIGHALGLMH 136
+ F +FD + W G + L A+HEIGH LGL H
Sbjct: 230 VRNAMF---HFDADENWSENPGPNQMDLESVAVHEIGHLLGLDH 270
>gi|83310367|ref|YP_420631.1| large exoprotein [Magnetospirillum magneticum AMB-1]
gi|82945208|dbj|BAE50072.1| Large exoprotein [Magnetospirillum magneticum AMB-1]
Length = 5299
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G +GNDV++GN+ N+V +GNDV G+SG DT
Sbjct: 4851 GGAGNDVLMGNAGNDVIDGGTGNDVLYGASGNDTL 4885
>gi|74196364|dbj|BAE33072.1| unnamed protein product [Mus musculus]
Length = 473
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 28/97 (28%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTS 161
+FD+A+ W +GT L A+HE+GH+LGL H + YP Y
Sbjct: 200 HFDEAETWTKSF-QGTNLFLVAVHELGHSLGLQHSNNPKSIMYPTY-------------- 244
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
YF P + A DI +Q +YGAP
Sbjct: 245 --RYFNPSTFRLSA----------DDIRNIQSLYGAP 269
>gi|301626287|ref|XP_002942325.1| PREDICTED: matrix metalloproteinase-24-like [Xenopus (Silurana)
tropicalis]
Length = 592
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 84/220 (38%), Gaps = 65/220 (29%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L Q W I Y + H + + EL+ ++ R A W KV LTF
Sbjct: 98 RRNKRYALTGQKWRQKHITY-----SIHNYTPKVGELD--TRKAIRQAFDVWQKVTPLTF 150
Query: 71 EETSIHSDIK----------FISSNNGYVCTPRYDSR-------YFM------EINFDKA 107
EE +S+IK F +S +P +D YF + +FD
Sbjct: 151 EEIP-YSEIKNERKEADIMIFFASGFHGDSSP-FDGEGGFLAHAYFPGPGIGGDTHFDSD 208
Query: 108 DVWRYGIGK--GTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSV 162
+ W G G L A+HE+GHALGL H P + + Y ++++
Sbjct: 209 EPWTLGNSNHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFK-------- 260
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+PQD D+ +QKIYG P ++
Sbjct: 261 ----LPQD----------------DLQGIQKIYGPPAETM 280
>gi|170744308|ref|YP_001772963.1| hemolysin-type calcium-binding region [Methylobacterium sp. 4-46]
gi|168198582|gb|ACA20529.1| Hemolysin-type calcium-binding region [Methylobacterium sp. 4-46]
Length = 260
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 21/136 (15%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIV 327
+++ G SGND + G +N GND DG SG DT + ++ N +I
Sbjct: 76 DTITGGSGNDTIFGEGGDNYIRGGKGNDAIDGGSGNDTIRGSGGEGMDTVHGGSGNDLIT 135
Query: 328 YDANEHKQDFLSDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MK 384
Y +D +R F D DS+ Y A + LI +G D
Sbjct: 136 Y---------TTDASSVRLFGDAGDDSI------AGGYGA--DTLIGGVGNDTLSGGLGA 178
Query: 385 HFYEFGLSEGRDITFD 400
+ FG ++G D+ D
Sbjct: 179 DSFVFGANDGTDVVRD 194
>gi|27378674|ref|NP_770203.1| hypothetical protein bll3563 [Bradyrhizobium japonicum USDA 110]
gi|27351823|dbj|BAC48828.1| bll3563 [Bradyrhizobium japonicum USDA 110]
Length = 3441
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+DL+ G + NT + ++I G +N ++++G SGND + G S +
Sbjct: 2736 VDLSAATGANGFTVTNTGAAAAITGSAQN---------DTLIGGSGNDTLAGGSGADSIT 2786
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
SG D G +G DTF + L +
Sbjct: 2787 GGSGADTMTGGAGSDTFVINSGQSLGTV 2814
>gi|45359865|ref|NP_004762.2| matrix metalloproteinase-20 preproprotein [Homo sapiens]
gi|322510116|sp|O60882|MMP20_HUMAN RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|157170228|gb|AAI52742.1| Matrix metallopeptidase 20 [synthetic construct]
gi|261857992|dbj|BAI45518.1| matrix metallopeptidase 20 [synthetic construct]
Length = 483
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 75/207 (36%), Gaps = 51/207 (24%)
Query: 40 LSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEE-TSIHSDIKFISSNNG------ 87
L++ I++ P+ V AL WS V L+F S +DI IS NG
Sbjct: 122 LTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINSGEADI-MISFENGDHGDSY 180
Query: 88 YVCTPRYDSRYFM--------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
PR + + +FD A+ W G G L A HE GHALGL H
Sbjct: 181 PFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAHEFGHALGLAHSTD 239
Query: 140 YNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ YP Y N Y + +P+D D+ +Q +YG
Sbjct: 240 PSALMYPTYKYKNPY----------GFHLPKD----------------DVKGIQALYGPR 273
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDS 225
K LG K P I + DS
Sbjct: 274 KVFLGKPTLPHAPHHK--PSIPDLCDS 298
>gi|288575654|ref|ZP_06393871.1| iron-regulated protein FrpC [Neisseria mucosa ATCC 25996]
gi|288567422|gb|EFC88982.1| iron-regulated protein FrpC [Neisseria mucosa ATCC 25996]
Length = 920
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 25/119 (21%)
Query: 245 LNTESWSSIG---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
L E+ +G G EK+ T+ + + + G +G+D + G N++ +GND G
Sbjct: 585 LGKEAMEKLGHKTGTEKDDTLYGNELANFITGGAGDDAISGYGGNDILHGGAGNDTLQGG 644
Query: 302 SGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-------VERLRF 346
+G DT Y S Y FE H +D +SD + LRF
Sbjct: 645 AGKDTLAGGAGDDRLYGGSSEADTYVFEKG--------HGKDVVSDSAYQAAHTDTLRF 695
>gi|209520246|ref|ZP_03269015.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. H160]
gi|209499321|gb|EDZ99407.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. H160]
Length = 398
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 27/102 (26%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----------------PDA 523
V FD YL + D+ + G A +HYI +G EGR PD
Sbjct: 306 IVNFDGDAYLDANPDV----AASGGNALQHYIYYGRFEGRPLSSAESFQRKARLAQLPDG 361
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
F A Y+ ++ D+ A DA DHF FG EGR +
Sbjct: 362 FDAKLYLEANPDVAAAGVDA-------VDHFVEFGRAEGRPL 396
>gi|253998953|ref|YP_003051016.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
gi|253985632|gb|ACT50489.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
Length = 1800
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+SG + + G + N+ + + GND DG +G D+ A Y I + I+
Sbjct: 900 GNSGTNALSGGAGNDTLYGNEGNDSLDGGAGADSLLGGAGDDTYIIDNLSDTIV------ 953
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
F+DQ ID+V + S++ Y +Y
Sbjct: 954 ------------EFSDQGIDTV---KSSLVSYQLAY 974
>gi|50234983|gb|AAT70722.1| matrix metalloproteinase 20 (enamelysin) [Homo sapiens]
gi|119587428|gb|EAW67024.1| matrix metallopeptidase 20 (enamelysin) [Homo sapiens]
Length = 483
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 75/207 (36%), Gaps = 51/207 (24%)
Query: 40 LSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEE-TSIHSDIKFISSNNG------ 87
L++ I++ P+ V AL WS V L+F S +DI IS NG
Sbjct: 122 LTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINSGEADI-MISFENGDHGDSY 180
Query: 88 YVCTPRYDSRYFM--------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
PR + + +FD A+ W G G L A HE GHALGL H
Sbjct: 181 PFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAHEFGHALGLAHSTD 239
Query: 140 YNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ YP Y N Y + +P+D D+ +Q +YG
Sbjct: 240 PSALMYPTYKYKNPY----------GFHLPKD----------------DVKGIQALYGPR 273
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDS 225
K LG K P I + DS
Sbjct: 274 KVFLGKPTLPHAPHHK--PSIPDLCDS 298
>gi|47213300|emb|CAF96568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 560
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 59/169 (34%), Gaps = 28/169 (16%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKF----IS 83
R++ LT L F Q V + A G WS V L F E TS +DI
Sbjct: 180 RWEKTDLTYKILRFPWQMSEAKVQHVLQEAFGVWSAVSPLRFREVTSDQADIIIDFNSCG 239
Query: 84 SNNGYVCTPRYDSRYFM---------------EINFDKADVWRYGIGKGTILSHNALHEI 128
S G Y S E++FD + W G G L A HE
Sbjct: 240 SWAGTGMATAYPSTALAGILAHAFFPRTHRQGEVHFDYDEHWTVGNDLGMDLLQVAAHEF 299
Query: 129 GHALGLMH---PGS-----YNGGYPVYGVDNDYENDSFLTSVMSYFMPQ 169
GH LGL H PG+ Y+ YP +D +L PQ
Sbjct: 300 GHVLGLQHSLEPGAVMSPFYSESYPPRLSQDDVRGIQYLYGPPLTVPPQ 348
>gi|254465629|ref|ZP_05079040.1| integrins alpha chain [Rhodobacterales bacterium Y4I]
gi|206686537|gb|EDZ47019.1| integrins alpha chain [Rhodobacterales bacterium Y4I]
Length = 1370
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
IE+ +G SG+D +IGN +N GND DG +G D
Sbjct: 329 IENAIGGSGDDAIIGNDLDNRIGSGGGNDTIDGGNGFD 366
>gi|83311100|ref|YP_421364.1| Type V secretory pathway, adhesin AidA [Magnetospirillum magneticum
AMB-1]
gi|82945941|dbj|BAE50805.1| Type V secretory pathway, adhesin AidA [Magnetospirillum magneticum
AMB-1]
Length = 3730
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G +GNDV++GN+ N+V +GNDV G+SG DT
Sbjct: 1167 GGAGNDVLMGNAGNDVIDGGTGNDVLYGASGNDTL 1201
>gi|260836059|ref|XP_002613024.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
gi|229298407|gb|EEN69033.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
Length = 494
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 62 WSKVVDLTFEETSIHSDIK--FISSNNGYVCTPRYDSR-------YFM------EINFDK 106
W +V L F TS SDI+ F+ ++G P +D R YF + +FD+
Sbjct: 133 WEQVTPLRFSRTSGTSDIEISFVQFSHG-DGNP-FDGRGGTLAHAYFPGTGIGGDAHFDE 190
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMH 136
++ W +GT L A HE GH+LGL H
Sbjct: 191 SEQWTVRTARGTNLFIVAAHEFGHSLGLEH 220
>gi|7741585|gb|AAF69021.1| calcium-binding outer membrane-like protein [Pseudomonas putida]
Length = 1800
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G GND+++G + N+ G+D+ G SG DTF + A
Sbjct: 1663 GGKGNDILLGGTGNDTLIGGQGDDILIGGSGADTFVWKA 1701
>gi|302875206|ref|YP_003843839.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578063|gb|ADL52075.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 962
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I++++ +GND + G N++ + G+D+ +G G DT + A +Y + + I+
Sbjct: 778 IDTIIAGAGNDSLYGEVGNDILYGRVGDDILEGGLGNDTLYGEAGQDVYVFRKGDGQDII 837
Query: 328 YDANEHKQDFLSDVERLRFAD 348
Y+++ +D ++L F D
Sbjct: 838 YNSSS----LDTDNDKLSFTD 854
>gi|298291987|ref|YP_003693926.1| Hemolysin-type calcium-binding region [Starkeya novella DSM 506]
gi|296928498|gb|ADH89307.1| Hemolysin-type calcium-binding region [Starkeya novella DSM 506]
Length = 984
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE ++GS+ D ++G + F +G DV +G+ G+DT Y S + A +
Sbjct: 514 IERIIGSAFVDTLLGGELADTFVGGAGADVLNGNGGVDTAEYSTSSTAVNVTIDPAATTI 573
Query: 328 YDANEHKQDFLSDVERL 344
+ + D ++++E L
Sbjct: 574 GTGGDAEGDQITNIENL 590
>gi|13471141|ref|NP_102710.1| rhizobiocin rzcA [Mesorhizobium loti MAFF303099]
gi|14021885|dbj|BAB48496.1| rhizobiocin; RzcA [Mesorhizobium loti MAFF303099]
Length = 1018
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++G++GND + G SA ++ ++GND +G+SG DT+ Y
Sbjct: 511 LLGTTGNDSINGTSATDIIRGAAGNDTLNGASGDDTYLY 549
>gi|329851154|ref|ZP_08265911.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840000|gb|EGF89572.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1502
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GD +++L GG I +T +++ G Y + + + I + G+S + +IGNS
Sbjct: 1356 GDKVIEL---GGEGTDIIFSTVTYNLNGRYAETIHLTGAGSINAT-GNSLANTLIGNSGA 1411
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
NV GND G +G DTF + A S ++ F
Sbjct: 1412 NVLNGLGGNDTLTGGAGADTFLFQASSRADRVTDF 1446
>gi|323446929|gb|EGB02926.1| hypothetical protein AURANDRAFT_68441 [Aureococcus anophagefferens]
Length = 584
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 21/108 (19%)
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
Y Y D+R FG D A A HY HG EGR + A+HED FA+ DL
Sbjct: 13 YADRYPDVRAAFGRDARALAAHYDAHGAGEGR---------HCAAHED----FAEVVDL- 58
Query: 548 QAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
G D + + G ++ P +++ D +D + A H+
Sbjct: 59 -EGLDVPARWRVLRGGTMEIVPHVFVELRGD------ADHARVAGHFC 99
>gi|268609136|ref|ZP_06142863.1| Ig family protein [Ruminococcus flavefaciens FD-1]
Length = 826
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G GNDV+ G N+ F+ G+DV G +G DTF+Y
Sbjct: 632 GFGGNDVLTGAKGNDKFYGGKGDDVMRGGNGDDTFYY 668
>gi|239787164|emb|CAQ64442.1| adenylate cyclase-hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
IE+ VGS+ +DV+IG++ NV +GNDV G +G D S L
Sbjct: 668 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDL 715
>gi|239787160|emb|CAQ64440.1| adenylate cyclase-hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
IE+ VGS+ +DV+IG++ NV +GNDV G +G D S L
Sbjct: 668 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDL 715
>gi|291567202|dbj|BAI89474.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 377
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
GGY +M ++++G SGND + G N+ SGN+V G GLDT
Sbjct: 92 GGYGDDMLFGNRGN-DTLIGGSGNDTIYGGVGNDWIVGGSGNNVLSGDRGLDTL 144
>gi|221118670|ref|XP_002163794.1| PREDICTED: similar to matrix metalloproteinase [Hydra
magnipapillata]
Length = 600
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHS------DIKFISS--NNGYVCT----------- 91
++V A +W KV L F++ + S ++KF+ + + YV
Sbjct: 193 VEDVLIEAFTKWEKVSSLNFKKLDLQSSEKVDIEVKFVQNYHQDPYVFDGLGGTLAHAFY 252
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
P + +++FD A+++ G G L A+HEIGH++GL H
Sbjct: 253 PHTNEGLSGDVHFDDAEMFTIGSSTGRNLLWVAVHEIGHSIGLEH 297
>gi|260222434|emb|CBA31994.1| hypothetical protein Csp_D29900 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 2774
Score = 37.0 bits (84), Expect = 9.5, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 19/105 (18%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQHTVIESVVGSS 275
++T+ SGG+D D+TL G V N + N + + ++ G N A T IES++G +
Sbjct: 2543 VETLIASGGND--DITL-GEVANSVTFNLGAGADKLTLSGTGANNVTA--TGIESIIGGA 2597
Query: 276 GNDVVI-----------GNSANNVFFESSGNDVFDGSSGLDTFFY 309
+D + G + ++ S+G D+ G SG D F +
Sbjct: 2598 ADDTITLALATVGSTLNGGAGDDTLVGSNGADILIGGSGADRFVF 2642
>gi|325981592|ref|YP_004293994.1| type I secretion target repeat-containing protein [Nitrosomonas sp.
AL212]
gi|325531111|gb|ADZ25832.1| type I secretion target repeat-containing protein [Nitrosomonas sp.
AL212]
Length = 475
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+GND V GN+ANN F GND G GLDT
Sbjct: 193 GAGNDTVTGNNANNTIFGGVGNDTLVGGGGLDTL 226
>gi|163850802|ref|YP_001638845.1| glycosyl transferase group 1 [Methylobacterium extorquens PA1]
gi|163662407|gb|ABY29774.1| glycosyl transferase group 1 [Methylobacterium extorquens PA1]
Length = 1303
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 560 EEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
E GR F+PD Y Y DL + G + +HY+ HG EGR
Sbjct: 28 EAGRGGAFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGR 70
>gi|15485208|emb|CAC67455.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
IE+ VGS+ +DV+IG++ NV +GNDV G +G D S L
Sbjct: 668 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDL 715
>gi|262276072|ref|ZP_06053881.1| hemolysin-type calcium-binding region [Grimontia hollisae CIP
101886]
gi|262219880|gb|EEY71196.1| hemolysin-type calcium-binding region [Grimontia hollisae CIP
101886]
Length = 691
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E + T+ +++ G +GNDV++GN +++ + G+D+ G SG D + A
Sbjct: 426 IEGNEGDDTLRGGAGNDTIYGGAGNDVLLGNEGDDILYGGDGDDILRGGSGSDALYGGAG 485
Query: 313 S-YLYKIY 319
+ YL Y
Sbjct: 486 NDYLQAGY 493
>gi|256427107|gb|ACU81101.1| adenylate cyclase toxin [Bordetella pertussis]
Length = 1706
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ ++G +GND + GN+ +N SG+D DG +G DT
Sbjct: 1010 VQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLV 1050
>gi|256830193|ref|YP_003158921.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256579369|gb|ACU90505.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum
DSM 4028]
Length = 1884
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+DLN + S G E ++ T IE++ GS ND +IGN NNV SGND G S
Sbjct: 384 VDLNLTTAQSGGDAEGDLL----TGIENLTGSDFNDTLIGNGQNNVLSGLSGNDSLVGGS 439
Query: 303 G 303
G
Sbjct: 440 G 440
>gi|239787162|emb|CAQ64441.1| adenylate cyclase-hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
IE+ VGS+ +DV+IG++ NV +GNDV G +G D S L
Sbjct: 668 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDL 715
>gi|170582316|ref|XP_001896076.1| Matrixin family protein [Brugia malayi]
gi|158596806|gb|EDP35086.1| Matrixin family protein [Brugia malayi]
Length = 306
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
I+FD ++ W G L + ALHEIGHALGL H
Sbjct: 236 IHFDGSEYWSIDGRNGLDLRYVALHEIGHALGLRH 270
>gi|5305316|gb|AAD41583.1|AF057703_1 structural toxin protein RtxA [Legionella pneumophila 130b]
Length = 1208
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+IGG + N + + G GNDV+ G S N+V +GND G SG D F
Sbjct: 518 TIGGGQGN---------DQIYGQEGNDVIDGGSGNDVIVGGTGNDTLTGGSGADQFV 565
>gi|260577452|ref|ZP_05845409.1| hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259020332|gb|EEW23671.1| hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 385
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 247 TESWSSIGGYEKNMTIAQHTV--------IESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
T S +++ N+T AQ+T +E++ +GNDV+ G++ NV +GND
Sbjct: 308 TASLATV--INLNLTTAQNTGQGLDRFLGVENLTTGAGNDVLTGSTLANVLSAGAGNDRL 365
Query: 299 DGSSGLDTFF 308
+G +G DT
Sbjct: 366 NGGAGDDTLL 375
>gi|15485206|emb|CAC67454.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
IE+ VGS+ +DV+IG++ NV +GNDV G +G D S L
Sbjct: 668 IENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDL 715
>gi|115525512|ref|YP_782423.1| hemolysin-type calcium-binding region [Rhodopseudomonas palustris
BisA53]
gi|115519459|gb|ABJ07443.1| Hemolysin-type calcium-binding region [Rhodopseudomonas palustris
BisA53]
Length = 484
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+++E+ I G + + E + G GNDV+ G N+V +G+DV +G +G
Sbjct: 338 VSSETGPDINGNNSGNALTGTSNGEKINGQGGNDVLSGLGGNDVLRGGNGHDVLNGGAGS 397
Query: 305 DTFFYYAPS--YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
D F A S +++K + + + A DF+ +++ FA+
Sbjct: 398 DQLFGGASSDTFVFKAGNGLDTVEDFAARGRSHDFVQ-IDKSMFAN 442
>gi|255263402|ref|ZP_05342744.1| poly(beta-D-mannuronate) C5 epimerase 7 [Thalassiobium sp. R2A62]
gi|255105737|gb|EET48411.1| poly(beta-D-mannuronate) C5 epimerase 7 [Thalassiobium sp. R2A62]
Length = 968
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA--PSYLYKIY---RFENAI 325
V+G SG+D ++G S ++ +GN+V DG G+DT +Y ++ + R ++
Sbjct: 590 VLGGSGDDTILGGSGDDALNGGAGNNVIDGGEGVDTIELAGSVANYTFETFSHIRIDDTE 649
Query: 326 IVYDANEHKQDFLSDVERLRF 346
N +F ERL F
Sbjct: 650 TGLGGNNKASNF----ERLAF 666
>gi|145297882|ref|YP_001140723.1| RTX protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142850654|gb|ABO88975.1| RTX protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 3195
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GGDD L GG N I ++ G N T+ + +++ G +GND +
Sbjct: 3005 LFGQGGDDFL----FGGAGNDILFGGSGNDTLYGESGNDTLYGGSGNDTLYGGAGNDTLS 3060
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N++ GND+ G +G DTF +
Sbjct: 3061 GGLGNDILVGGLGNDILKGDAGADTFTWL 3089
>gi|540077|gb|AAA21546.1| HlyA [Nostoc sp. PCC 7120]
Length = 322
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 227 GDDLLDLTLIG---------GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
GD L +L LIG ++N I N + GG + N TI +++ G SGN
Sbjct: 136 GDHLENLILIGNSPIDGTGNALRNNITGNVANNILSGGAD-NDTIISGDGDDTLYGDSGN 194
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
D + G + N++ G+D G +G DTF + AP
Sbjct: 195 DTLTGGNGNDILVGGMGSDRLTGGNGKDTFAFSAP 229
>gi|75910358|ref|YP_324654.1| VCBS [Anabaena variabilis ATCC 29413]
gi|75704083|gb|ABA23759.1| VCBS [Anabaena variabilis ATCC 29413]
Length = 6581
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Query: 255 GYEKNMTIAQHT-------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G N+T+ T IE+V G ND++IG+S +N S GND +G G DT
Sbjct: 1954 GITVNLTVGSATNITNGIQGIENVTGGISNDLIIGDSQDNTLAGSGGNDTLNGGDGDDTL 2013
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-TA 366
+V +E + ++ AD ++ VN +E T
Sbjct: 2014 IISVLGISTVDGGNGKDTLVVRGSEDADNLEVANNKITTADGTLELVNWTGVEAVEVKTL 2073
Query: 367 SYEDLIQV 374
+ +D+I V
Sbjct: 2074 AGDDVITV 2081
>gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
CS-505]
gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
CS-505]
Length = 9381
Score = 37.0 bits (84), Expect = 9.8, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G+D +D GG N E + G N TI + + + G GND+++GN
Sbjct: 8100 NAGNDQID----GGSGNDYLQGGEGADILNGGMGNDTIEGNGGNDQIDGGDGNDILLGNE 8155
Query: 285 ---------ANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N++ +G+D+ +G G D F++ + S
Sbjct: 8156 DNDWLTGQVGNDILIGGTGDDILNGGEGADVFYFSSKS 8193
>gi|209882815|ref|XP_002142843.1| glucose-6-phosphate isomerase family protein [Cryptosporidium muris
RN66]
gi|209558449|gb|EEA08494.1| glucose-6-phosphate isomerase family protein [Cryptosporidium muris
RN66]
Length = 567
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 14/89 (15%)
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL-------- 443
S G+ +T D+ L LG Y FG + G A+H + +GRN + +
Sbjct: 360 SNGKGVTLDNNLILGRYQTSPIYFG-EPGTNAQHSFYQLLHQGRNCTNCEFIGFVHSQQD 418
Query: 444 -----EYIASHEDLINAFADAPDLVQVGK 467
E+I++H++L+ F PD + +GK
Sbjct: 419 FHLMNEHISNHDELMCNFFAQPDALAIGK 447
>gi|119485245|ref|ZP_01619630.1| hypothetical protein L8106_07344 [Lyngbya sp. PCC 8106]
gi|119457473|gb|EAW38598.1| hypothetical protein L8106_07344 [Lyngbya sp. PCC 8106]
Length = 632
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + G+ NDV++G+S NN GNDV G G D F Y P
Sbjct: 487 VNNATGTDFNDVLVGSSTNNTIEGRRGNDVVTGGGGADLFSYATP 531
>gi|117918839|ref|YP_868031.1| outer membrane adhesin like protein [Shewanella sp. ANA-3]
gi|117611171|gb|ABK46625.1| putative outer membrane adhesin like proteiin [Shewanella sp. ANA-3]
Length = 5839
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G +GND +IG + N+ G+DV G SG DTF ++R+ +A
Sbjct: 5672 DTLIGGAGNDTLIGGAGNDTLIGGLGDDVLRGDSGNDTF----------VWRYADA---D 5718
Query: 329 DANEHKQDFLSDVERLRFAD 348
+H DF ++L +D
Sbjct: 5719 KGTDHIMDFNVSEDKLDLSD 5738
>gi|302875208|ref|YP_003843841.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578065|gb|ADL52077.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 914
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I++++ +GND + G N++ + G+D+ +G G DT + A +Y + + +
Sbjct: 262 IDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTI 321
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHF 386
D ++ LRF D IDS V ++Y+ +I V G D + +F
Sbjct: 322 NDTAGENNTI---IDTLRFED--IDSTEVTLNK-----SAYDLVITVNGSSDSVRILSYF 371
Query: 387 Y 387
Y
Sbjct: 372 Y 372
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I++++ +GND + G N++ + G+D+ +G G DT + A +Y + + +
Sbjct: 648 IDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTI 707
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHF 386
D ++ LRF D IDS V ++Y+ +I V G D + +F
Sbjct: 708 NDTAGENNTI---IDTLRFED--IDSTEVTLNK-----SAYDLVITVNGSSDSVRILSYF 757
Query: 387 Y 387
Y
Sbjct: 758 Y 758
>gi|15965753|ref|NP_386106.1| putative hemolysin-type calcium-binding protein [Sinorhizobium
meliloti 1021]
gi|15075022|emb|CAC46579.1| Hemolysin-type calcium-binding protein [Sinorhizobium meliloti
1021]
Length = 548
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G+ GND + G + N+V + +G+DV G +G DTF + + ++
Sbjct: 411 GGSGNDSIRTLAGDDQLAGNDGNDRLDGGAGNDVLWGGAGDDVMTGGAGADTFLWSSDTF 470
Query: 315 LYK 317
+
Sbjct: 471 SFA 473
>gi|307308686|ref|ZP_07588385.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|307318820|ref|ZP_07598252.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306895541|gb|EFN26295.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306900891|gb|EFN31501.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 537
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G+ GND + G + N+V + +G+DV G +G DTF + + ++
Sbjct: 400 GGSGNDSIRTLAGDDQLAGNDGNDRLDGGAGNDVLWGGAGDDVMTGGAGADTFLWSSDTF 459
Query: 315 LYK 317
+
Sbjct: 460 SFA 462
>gi|253998404|ref|YP_003050467.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
gi|253985083|gb|ACT49940.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
Length = 863
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TIA ++G G+D++IG+ ++ + GND DG +G D + A
Sbjct: 484 GNAANNTIAGSGAGNKILGLGGDDILIGDELGDIV--AGGNDTLDGGAGNDALYGGAGDD 541
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++ ++ + N+ V L + I S+ + ++ E T++ D + +
Sbjct: 542 SLVGGTGQDTLVGGEGNDRY------VVNLLTSGTSIGSL---EDNVTEDTSAGTDTVYL 592
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYL------GSYDDLRNVFGSD-----RGAAA 423
IG + + F D+T D++L + G+ N+ GSD +G AA
Sbjct: 593 IGNVKLSAYQMF---------DLTTDTFLNIEHLDISGTGSSKFNILGSDESNSLKGNAA 643
Query: 424 RHYITHGV 431
+ + G+
Sbjct: 644 ANLLDGGI 651
Searching..................................................done
Results from round 2
>gi|254780384|ref|YP_003064797.1| serralysin [Candidatus Liberibacter asiaticus str. psy62]
gi|254040061|gb|ACT56857.1| serralysin [Candidatus Liberibacter asiaticus str. psy62]
Length = 665
Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats.
Identities = 665/665 (100%), Positives = 665/665 (100%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG
Sbjct: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
Query: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL
Sbjct: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC
Sbjct: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK
Sbjct: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG
Sbjct: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS
Sbjct: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG
Sbjct: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF
Sbjct: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF
Sbjct: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK
Sbjct: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
Query: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI
Sbjct: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
Query: 661 NHDFS 665
NHDFS
Sbjct: 661 NHDFS 665
>gi|315122203|ref|YP_004062692.1| serralysin [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495605|gb|ADR52204.1| serralysin [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 493
Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats.
Identities = 293/439 (66%), Positives = 345/439 (78%), Gaps = 1/439 (0%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
M +IKPVYTTE IAD+LLRD YW+NYF++Y+P V T HRLSFD+TELN N QE+ RWA
Sbjct: 1 MDDIKPVYTTESIADYLLRDSYWANYFLKYQPTVYTDHRLSFDVTELNANGQEIVRWAFR 60
Query: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
EWSKVV++TFEETS SDI+F S++ GY+C P+ + RYFMEIN D DV YGI KGTIL
Sbjct: 61 EWSKVVNITFEETSNLSDIQFKSNDFGYICIPKNNFRYFMEINLDARDVDFYGIDKGTIL 120
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-MMDASFGY 179
SHNA+HEIGHALGL+H G YNGG P YGVDN Y NDSFLTSVMSYF ++ DASFGY
Sbjct: 121 SHNAIHEIGHALGLLHAGPYNGGSPTYGVDNQYANDSFLTSVMSYFDQNENRTTDASFGY 180
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
CATPMV+DIVAVQKIYGAPK +G+ I+KIEV+Q SPFIQTIYDSGG DLLD+ +G
Sbjct: 181 CATPMVADIVAVQKIYGAPKTLVGDTIHKIEVKQGYSPFIQTIYDSGGSDLLDVQSVGTF 240
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
NYIDLN ESWSSIGGY+KN+TIA+ T+IESV+G +GND +IGNSANN F+S GND F
Sbjct: 241 DNYIDLNPESWSSIGGYKKNVTIARDTIIESVIGGAGNDTIIGNSANNTLFKSGGNDTFY 300
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G+ G D Y YKIYRF+N I+YD ++ D + DVE LRF++ ID ++KQ+
Sbjct: 301 GADGWDVMVYSMLKNDYKIYRFKNEAIIYDMFRNEVDDIIDVESLRFSNDQIDLADIKQQ 360
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
SILEYTASY DL+Q IG DV S KHF +FGL EGRDITF+ YLYLGSYDDLR VFGSD+
Sbjct: 361 SILEYTASYGDLVQCIGNDVNASKKHFVDFGLREGRDITFNPYLYLGSYDDLRQVFGSDK 420
Query: 420 GAAARHYITHGVKEGRNPD 438
+A RHYITHG +EGRNP
Sbjct: 421 DSATRHYITHGFREGRNPG 439
Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/150 (43%), Positives = 81/150 (54%), Gaps = 17/150 (11%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL 579
+ LEY AS+ DL+ + V A K HF +FG EGR ITFNP LYL SYDDL
Sbjct: 356 DIKQQSILEYTASYGDLVQCIGND---VNASKKHFVDFGLREGRDITFNPYLYLGSYDDL 412
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGI----SGMQFKSVMNLSEKSRDKADLSLSFDHK 635
VFGSD+ +A +HYITHG +EGR G MQ +LSEKS++ S FD K
Sbjct: 413 RQVFGSDKDSATRHYITHGFREGRNPGFMYRDDSMQHS--FSLSEKSQEHKYTSTFFDPK 470
Query: 636 KVDLYTDYFGDGNYYDSDLYSMHDINHDFS 665
+ DL ++F N + D DFS
Sbjct: 471 E-DLSENFFEWPNSF-------QDTIFDFS 492
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
LEY AS+ DL+ + V K HF +FG EGR +TF+ YLYLGSYDDLR VFGSD
Sbjct: 363 LEYTASYGDLVQCIGND---VNASKKHFVDFGLREGRDITFNPYLYLGSYDDLRQVFGSD 419
Query: 503 RGAAARHYITHGVKEGRNPDAFK 525
+ +A RHYITHG +EGRNP
Sbjct: 420 KDSATRHYITHGFREGRNPGFMY 442
>gi|328541869|ref|YP_004301978.1| peptidase M10, serralysin-like protein [polymorphum gilvum
SL003B-26A1]
gi|326411620|gb|ADZ68683.1| Peptidase M10, serralysin-like protein [Polymorphum gilvum
SL003B-26A1]
Length = 789
Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 217/658 (32%), Positives = 315/658 (47%), Gaps = 68/658 (10%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
PVY+ ++IA L + N + R+ +V ++ DIT L + +A AL W+ V
Sbjct: 30 PVYSNDQIAHQLTDGYWNHNGYGRHSFNVAPGGSITVDITGLTSAGRSLATQALQAWTDV 89
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHN 123
+ F + + + I F +N+G + + + + + + W YG +
Sbjct: 90 TGINFAQVTGGAQITFDDNNSGAYASTWWSGTTITQASVNISTAWLSAYGTSIDSYSFQT 149
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCAT 182
+HEIGHALGL H G+Y+G YGV N Y NDS+ S+MSYF +++ + AS+ Y T
Sbjct: 150 YVHEIGHALGLGHAGNYDGS-ATYGVHNHYANDSWQASIMSYFDQVENTSIAASYAYAIT 208
Query: 183 PMVSDIVAVQKIYGAPKG-SLGNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLD 232
PMV+DI+A+Q +YG P GN +Y + P TIYD+GG D L+
Sbjct: 209 PMVADIIAIQNLYGTPTTIRAGNTVYGDGSTAGGYLDSLTSFSRPVAVTIYDNGGFDTLN 268
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ IDL E SS+ G N+ IA+ TVIE+ +G SGND +IGN+ANN
Sbjct: 269 FGTVS-ANQTIDLRAEHVSSVRGLTGNLIIARGTVIENAIGGSGNDTLIGNAANN----- 322
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ DG +G DT A ++ F + + A+ D L ++E + F+D
Sbjct: 323 ----ILDGGAGFDTAHIGASLAGTRVTVFFEGMTL--ASSQGNDVLVNIEMVAFSDTTRS 376
Query: 353 SVNVKQRSILE-YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + + Y ASY DLI IG + + H+ F +EGR ITF+ Y+ S+ DL
Sbjct: 377 TASFGSSGSIYAYGASYADLITGIGGNALGLLNHYANFAAAEGRSITFNGLSYIASHVDL 436
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV------ 465
G++ A HYI+HG EGR F L YIASH DLI A + +
Sbjct: 437 IQAHGANATIGALHYISHGYGEGRTI-TFDGLAYIASHADLIQAHGANATIGALHYVSHG 495
Query: 466 -------------------------------GKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
G +H+ N G EGR + FD+ LYLG+Y D
Sbjct: 496 YGEGRTTSFNGLEYIAAYADLRAAYGTNGSIGAEHYINHGFGEGRGLRFDTRLYLGAYAD 555
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
LR +G+D A H+I HG EGR+ D F AL+YIAS+ DLI + H+
Sbjct: 556 LRAAYGTDINQAVTHFIQHGAAEGRSTDRFSALDYIASYGDLIAVYGTN---TAGALQHY 612
Query: 555 SNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
G+ EGR F+ Y+ SY DL +GSD + H+I HG EGR+ +
Sbjct: 613 YAHGFTEGRGDNFDGLRYIASYADLILAYGSDATQGTTHFIMHGFGEGRSTLFDAAAY 670
Score = 158 bits (400), Expect = 3e-36, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L + + LEY A+Y DL G + +H+ G EGR + FD+ L
Sbjct: 489 LHYVSHGYGEGRTTSFNGLEYIAAYADLRAAYGTNGSIGAEHYINHGFGEGRGLRFDTRL 548
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
YLG+Y DLR +G+D A H+I HG EGR+ D F AL+YIAS+ DLI +
Sbjct: 549 YLGAYADLRAAYGTDINQAVTHFIQHGAAEGRSTDRFSALDYIASYGDLIAVYGTN---T 605
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
H+ G EGR FD Y+ SY DL +GSD H+I HG EGR+
Sbjct: 606 AGALQHYYAHGFTEGRGDNFDGLRYIASYADLILAYGSDATQGTTHFIMHGFGEGRST-L 664
Query: 524 FKALEYIAS--HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWN 581
F A YI + + DL+ + D H+ GY EGR+++ ++
Sbjct: 665 FDAAAYINASGNADLLAVYGSNLD---GAVLHYVRHGYFEGRNLSGGGSQEAIAFSQAAE 721
Query: 582 V 582
Sbjct: 722 A 722
>gi|222087758|ref|YP_002546295.1| metallopeptidase protein [Agrobacterium radiobacter K84]
gi|221725206|gb|ACM28362.1| metallopeptidase protein [Agrobacterium radiobacter K84]
Length = 640
Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats.
Identities = 167/668 (25%), Positives = 255/668 (38%), Gaps = 101/668 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFD-----ITELNPNAQEVARWALG 60
P +T D L+ +YW++ + + S+ LN Q AL
Sbjct: 9 PWPSTSNDVDGLIYGRYWASSALDFSFTTSGAQYGSYSGEQLTFQPLNATMQAAVHSALA 68
Query: 61 EWSKVVDLTF-EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------- 112
++S + +LTF EETS+ + + Y YF + DVW
Sbjct: 69 QYSSISNLTFMEETSVPGNATLRFGMSDEAQNSAY--TYFPSESAQGGDVWFGTQSGLSA 126
Query: 113 --GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ- 169
KG + LHEIGHALGL HP + V +DS +VMSY
Sbjct: 127 MTNPVKGNYAWISTLHEIGHALGLKHPHEF---SNTNFVTTSLAHDSMEFTVMSYRSYTG 183
Query: 170 ----DSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK---------- 214
+ FG+ + M+ DI A+QK+YGA GN Y
Sbjct: 184 ASLYTGYTNEDFGFAQSLMMYDIAAIQKLYGADFSAHAGNTTYTFSSTTGEMFIDGVGQG 243
Query: 215 ---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----GYEKNMTIAQHTV 267
D+ T++D GG D D + ++ I+L WS++ Y + A V
Sbjct: 244 KPGDNRVFLTVWDGGGVDTYDFSNYTSAQS-INLAPGGWSAMSRSQLAYLGDGHFAHGNV 302
Query: 268 -------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
IE+ +G SG+D +IGN+ANN GND G +G+DT +
Sbjct: 303 YNALQYNGDNRSLIENAIGGSGSDTIIGNAANNSLTGGGGNDWLSGGAGVDTAVFNFSLK 362
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQ 373
+ A+++ D L +E+L+F+D+ I + + Y D+
Sbjct: 363 QATVDYGNRAMLL--NGSEGHDSLVWIEKLQFSDRTIVQDDGSALVDDMFYYTHNHDVFD 420
Query: 374 VIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
++ +H+ G EG D FD+ YL Y D+ +HY G
Sbjct: 421 A----GADADQHYSNVGWREGLDPNKFFDTSEYLAKYHDVAAA----GINPLQHYDQFGW 472
Query: 432 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-----FDS 485
KEGR+P + F EY+ + D+ A D +H+ FG EGR V D
Sbjct: 473 KEGRDPSSLFHTSEYLRLNPDVAAAKIDP-------LEHYLKFGIYEGRNVNAKDLLIDD 525
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 544
Y + D+ +HY G EGR+P+ F Y+A++ D+ A +
Sbjct: 526 TFYFKNNPDVETAHAD----PEQHYNQFGWHEGRDPNPFFDTSGYLAAYHDVAAAGVNP- 580
Query: 545 DLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
H+ +G+ EGR F+ YL D+ +HY+ G+ EG
Sbjct: 581 ------FTHYLQYGWHEGRDPSRNFDAAGYLKLNPDVAAA----GINPLEHYLEFGVFEG 630
Query: 603 RALGISGM 610
R G
Sbjct: 631 RTYVSDGT 638
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 18/145 (12%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 538
D Y D+ + A +HY G +EG +P+ F EY+A + D+
Sbjct: 403 SALVDDMFYYTHNHDVFDAGAD----ADQHYSNVGWREGLDPNKFFDTSEYLAKYHDVAA 458
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
A + H+ FG++EGR + F+ YL D+ + +HY+
Sbjct: 459 AGINP-------LQHYDQFGWKEGRDPSSLFHTSEYLRLNPDVAAA----KIDPLEHYLK 507
Query: 597 HGMKEGRALGISGMQFKSVMNLSEK 621
G+ EGR + +
Sbjct: 508 FGIYEGRNVNAKDLLIDDTFYFKNN 532
>gi|296535274|ref|ZP_06897481.1| peptidase [Roseomonas cervicalis ATCC 49957]
gi|296264395|gb|EFH10813.1| peptidase [Roseomonas cervicalis ATCC 49957]
Length = 646
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 168/668 (25%), Positives = 264/668 (39%), Gaps = 112/668 (16%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKP----DVLTTHRLSFDITELNPNAQEVA---RWALGE 61
T +R D +L W + Y D + + D+ E P ++A R+ L
Sbjct: 10 TGDRNIDAVLWGVRWKATELTYSFPEDADGYSGEEPNIDLAEFQPVTADLADAIRFILET 69
Query: 62 -WSKVVDLTFEETSIHSD-----IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG-- 113
+ V LTF E + SD S + PR+ + D+W
Sbjct: 70 QFPAVAQLTFREVAPGSDSMLTFGTLTSEETAHANIPRFSPDSY------AGDIWFNQQQ 123
Query: 114 ---IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN---DYENDSFLTSVMSYFM 167
G+ A+HEIGH+LGL H G YGV + DS S+M+Y
Sbjct: 124 FNLAPIGSYAYFTAMHEIGHSLGLKHGHD-GGSPVEYGVSTLPLTADRDSVEFSIMTYRP 182
Query: 168 PQDSMMDA----SFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE------------ 210
+ + Y TPM+ DI A+Q +YGA + + G+ +Y+ +
Sbjct: 183 YTAANFEYYTIPDGSYPQTPMMYDIAALQYLYGANYETNAGDTVYRFDRDTGEMSVNGVG 242
Query: 211 -VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE----KNMTIAQ- 264
+ ++TI+D GG+D D + IDL+ W+ +G + M +AQ
Sbjct: 243 QGAPSANVILRTIWDGGGNDTYDFSNY-EADLRIDLSPGGWTVLGTEQRATMGQMEVAQA 301
Query: 265 ------------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
++IE+ +G SG+D + GN A+N G ++ DG G DT A
Sbjct: 302 HLYNALLYQDDPRSLIENAIGGSGDDTIFGNGADNRLEGGLGTNILDGRGGFDTAVIAAA 361
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTASYEDL 371
Y FE + ++ + K D +E F+D + L Y D+
Sbjct: 362 LTDIT-YSFEGRYLAFERPDEKGDLAIRIEAFAFSDGTVIRDDGFALLDDLYYYTQNHDI 420
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
++ H+ G EGRD F + +YL D+ G D +HY
Sbjct: 421 WLA----GADAEAHYAASGWREGRDPNAFFSTAVYLAMNPDVAAA-GID---PLQHYREF 472
Query: 430 GVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--------- 479
G KE R+P AF Y+A + D+ A + +H+ +G EGR
Sbjct: 473 GWKELRDPSAAFDTGAYLARYTDVAAAGINP-------LEHYLAYGQAEGRLPLPVVGEL 525
Query: 480 -FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
+ FD+ YL S D+ +A HY T G +EGR+P+A F Y+ S+ D+
Sbjct: 526 NVIGFDASYYLLSNLDVLQAG----LSAWGHYSTQGWREGRDPNAYFDTSLYLESNPDVA 581
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
A D H+ G+ EGR+ + F+ YL +Y D+ + H++
Sbjct: 582 AAGMDP-------LQHYHESGWREGRTPSERFDGAAYLAAYADIAE----GQYDPLLHFL 630
Query: 596 THGMKEGR 603
+G EGR
Sbjct: 631 KYGRDEGR 638
Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 18/138 (13%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
+ +NV Y S D++Q + H+ G EGRD FD+ LYL S
Sbjct: 521 VVGELNVIGFDASYYLLSNLDVLQA----GLSAWGHYSTQGWREGRDPNAYFDTSLYLES 576
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
D+ +HY G +EGR P F Y+A++ D+ D
Sbjct: 577 NPDVAAA----GMDPLQHYHESGWREGRTPSERFDGAAYLAAYADIAEGQYDP------- 625
Query: 467 KDHFSNFGCEEGRFVTFD 484
HF +G +EGR D
Sbjct: 626 LLHFLKYGRDEGRLAFAD 643
>gi|296533245|ref|ZP_06895863.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266431|gb|EFH12438.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 636
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 154/612 (25%), Positives = 237/612 (38%), Gaps = 83/612 (13%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF-----------ISSNNGYVCTPRYD- 95
N + + + +LTF E S+ F ++ P
Sbjct: 56 NTYERAQLLQVFELYQAITNLTFTEVDTESEADFHLLLGDLPSLEGATPAAIFNPPVGGE 115
Query: 96 -SRYFMEINFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
Y M +A G + +G +HEIGH LGL HP GG V+ D
Sbjct: 116 LDGYGMFNIIPRAWSREPGGRLDQGGSAFQTLIHEIGHGLGLAHPHDDGGGSTVFPGVED 175
Query: 153 ------YENDSFLTSVMSYFMPQDSMMD-----ASFGYCATPMVSDIVAVQKIYGAPKG- 200
++ + + ++MSY + D +G+ TPM DI +Q YGA
Sbjct: 176 SWETGEFDLNQGVWTMMSYVRGWATGPDGPPVLPEYGHSMTPMAFDIAVLQARYGANTTY 235
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW---------- 250
+ G++IY++ I+D+GGDD + + G +DL +
Sbjct: 236 ATGDDIYELWDTDGPGTGYAAIWDAGGDDAIRYS--GARDAVVDLRAATLEWAPGGGGFV 293
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-FY 309
S + G TIA VIE + +GND + GN A+N+FF SGND+ DG G + F
Sbjct: 294 SYVSGVHGGYTIAHGVVIEVALLGAGNDRITGNDADNLFFGGSGNDMIDGGGGRNAAGFT 353
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTASY 368
+ + L R+ N +I+ QD L ++ RL FAD I+ L Y
Sbjct: 354 TSFTELASFGRYGNTVILD--GPEGQDTLVNIHRLMFADGTIELDRGSPLVDPLHYYFDN 411
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
D+ + +HF +G EGRD F Y + SY + + HY+
Sbjct: 412 RDVWLA----GMNAEEHFASYGWREGRDPNF--YFSVSSYLAVNQDVAAAGLNPLEHYLD 465
Query: 429 HGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------ 481
+G +EGR+P A F Y+A + D+ A + H+ +G E R
Sbjct: 466 YGWREGRDPSAWFDTDLYLARNPDVAAAGLNP-------LLHYLTYGQNEQRSSFQALGK 518
Query: 482 ----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
FD+ YL + D+ A +HY G +E R+P+ + + EY +
Sbjct: 519 EIRDGFDAEFYLLANPDVARAG----IDARQHYEEFGWREERSPNGWFSTEYYLDMNPDV 574
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
A P H+ G+ EGR S F YL + D+ +HY+
Sbjct: 575 AAAGINP------LAHYHTDGWREGRDPSPLFETGRYLANNPDVAAA----GIDPLEHYL 624
Query: 596 THGMKEGRALGI 607
G+ EGR
Sbjct: 625 RFGLAEGRDAPF 636
>gi|254501291|ref|ZP_05113442.1| Peptidase M10 serralysin C terminal domain family [Labrenzia
alexandrii DFL-11]
gi|222437362|gb|EEE44041.1| Peptidase M10 serralysin C terminal domain family [Labrenzia
alexandrii DFL-11]
Length = 506
Score = 353 bits (905), Expect = 6e-95, Method: Composition-based stats.
Identities = 147/471 (31%), Positives = 220/471 (46%), Gaps = 40/471 (8%)
Query: 9 TTERIADHLLRDQY-WSNYFI-RYKPDVLTTHRLSF-----DITELNPNAQEVARWALGE 61
+ I L R Y W + Y + N ++AR AL
Sbjct: 34 SLNYIIGQLNRGDYSWGGIAVVTYSFAKVLPSYAKGLDEYDGFNSFNSQQMDMARLALET 93
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------RYG 113
WS V D+TF+E+ S + I+F +S+ + Y + DVW
Sbjct: 94 WSDVADITFQESNSYFAPIRFANSDTLADYS--AAHAYLPGFSSWAGDVWVNSDYAYNTS 151
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYN--GGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G +HEIGHA+G HPG YN GG Y + Y DS S+MSY+ +
Sbjct: 152 PEIGNYGYKVLVHEIGHAIGQPHPGDYNASGGKLSYQNNAAYAEDSAQYSIMSYWDESHT 211
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ--------QKDSPFIQTI 222
D + TPM+ DI+A+Q YG + + +Y +++ + +I
Sbjct: 212 GADFGDAFAQTPMLHDILAIQAKYGVNMSTRTDDTVYGFNSNTESPIYDFSQNTAPVFSI 271
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D+GG D +D + V I+LN +SS G N++IA VIE+ +G +G+DVVIG
Sbjct: 272 WDAGGIDTIDFSGY-FVDTVINLNEGGFSSAAGLTNNISIAYGAVIENAIGGAGDDVVIG 330
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N +N+ +G+DV F S Y F+N + ++H D L++VE
Sbjct: 331 NQWDNLVDAGAGSDV---------FVLNQSSSSADTYVFDNGETIV-FSDHGTDRLTNVE 380
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ +AD +D + Q SILEY ASYED+ + G D HF EFGL+EGR I F +
Sbjct: 381 IIFYADAELDVIAQTQVSILEYAASYEDVEEAFGTDEEALFDHFVEFGLTEGRTIDFSAL 440
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
Y+ S++DL VFG+D A ARHYI G E R F + ++ ++ +L+
Sbjct: 441 DYIASHEDLIEVFGADAEAGARHYIEFGRAENREI-TFDSAAFLEANPELV 490
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
Y SY+D+ FG+D A H++ G+ EGR D F AL+YIASHEDLI F +
Sbjct: 401 EYAASYEDVEEAFGTDEEALFDHFVEFGLTEGRTID-FSALDYIASHEDLIEVFGADAE- 458
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
AG H+ FG E R ITF+ +L + +L + G + +AA
Sbjct: 459 --AGARHYIEFGRAENREITFDSAAFLEANPELVPLQGQEINAA 500
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
LEY AS+ED+ AF + A DHF FG EGR+I F+ Y+ S++DL VFG+D
Sbjct: 400 LEYAASYEDVEEAFGTDEE---ALFDHFVEFGLTEGRTIDFSALDYIASHEDLIEVFGAD 456
Query: 587 RSAAAQHYITHGMKEGRALGISGMQF 612
A A+HYI G E R + F
Sbjct: 457 AEAGARHYIEFGRAENREITFDSAAF 482
>gi|209966645|ref|YP_002299560.1| Serralysin precursor, putative [Rhodospirillum centenum SW]
gi|209960111|gb|ACJ00748.1| Serralysin precursor, putative [Rhodospirillum centenum SW]
Length = 650
Score = 334 bits (855), Expect = 4e-89, Method: Composition-based stats.
Identities = 131/533 (24%), Positives = 201/533 (37%), Gaps = 96/533 (18%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-------HSDIKFISSNNGY 88
+ L + R AL ++ +V + F E + S GY
Sbjct: 136 PDRPTAATFVTLTEAQRAATRLALAQYEEVSLIRFTEVTDEEAALLRFGSHAMDGSLAGY 195
Query: 89 VCTPRYDSRYF------MEINFDKADVW------RYGIGKGTILSHNALHEIGHALGLMH 136
P + R + D W GT + +HE+GHALGL H
Sbjct: 196 AYYPSFAVRTSDDIITAATPSGIAGDSWLAASAANAAPTPGTDAFNTVIHELGHALGLKH 255
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM--------DASFGYCATPMVSDI 188
P G P V DS +VMSY P +S + ++ T M+ DI
Sbjct: 256 PFE---GVPSVSV----AEDSVRYTVMSYTYPDNSEIWVEYPDRWGSALVSPRTLMLYDI 308
Query: 189 VAVQKIYGAPKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+AVQ +YG + G+ +Y Q + F +TI+D GG D +D + + IDL
Sbjct: 309 LAVQYLYGVNTATRAGDTVYSW---QPNERFFETIWDGGGTDTVDASAQT-LDCVIDLRD 364
Query: 248 ESWSSI------------------------GGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+SSI N+ IA VIE+ G +GND +IGN
Sbjct: 365 GHFSSIAIRATEAQKRMDLPADADYLTTPTYDGRDNLAIAYGAVIENARGGAGNDTLIGN 424
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV---------YDANEHK 334
+A N+ +G+D G +G DT + + +I +A+ +
Sbjct: 425 AAANLLEGGAGDDRLSGGTGDDTIDGGSGVDVIRIEAARSAVTLEATGPWGVRLSGAATG 484
Query: 335 QDFLSDVERLRFADQCIDSV-----------NVKQRSILEYTASYEDLIQVIGQDV-FES 382
D S VE +RF DQ + Y A + D+ +
Sbjct: 485 TDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLARWADVRAAVNAGQVMSG 544
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA 439
++H+ FG +EGRD T FD YL + D+R + + + HY+ G +E R+P A
Sbjct: 545 LEHYLAFGQAEGRDPTPLFDEEAYLARWADVRAAVEAGQVRSGYEHYLNSGWREDRDPSA 604
Query: 440 -FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLG 490
F Y+ + D+ +A D H+ +G E R T D+ L+L
Sbjct: 605 WFDLSAYLQRNPDVADAGIDP-------LRHWLVWGIGENRIATAADTGLWLA 650
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL + D+R + + + HY+ G EGR+P F Y+A D+ A
Sbjct: 520 FDEAFYLARWADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRAAV 579
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
V++G +H+ N G+ E R + F+ YL D+ + +H++ G
Sbjct: 580 EAGQ--VRSGYEHYLNSGWREDRDPSAWFDLSAYLQRNPDVADA----GIDPLRHWLVWG 633
Query: 599 MKEGR 603
+ E R
Sbjct: 634 IGENR 638
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF Y+A D+ A V +G +H+ FG EGR T F+ + YL + D+
Sbjct: 519 AFDEAFYLARWADVRAAV--NAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVR 576
Query: 581 NVFGSDRS-AAAQHYITHGMKEGRALG 606
+ + + +HY+ G +E R
Sbjct: 577 AAVEAGQVRSGYEHYLNSGWREDRDPS 603
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGRALG--ISGMQFKSVMNLSEKS 622
F+ YL + D+ + + + +HY+ G EGR + + +
Sbjct: 519 AFDEAFYLARWADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRAA 578
Query: 623 RDKADLSLSFDH 634
+ + ++H
Sbjct: 579 VEAGQVRSGYEH 590
>gi|60461914|gb|AAX21094.1| ProA [Serratia proteamaculans]
Length = 504
Score = 330 bits (845), Expect = 7e-88, Method: Composition-based stats.
Identities = 100/407 (24%), Positives = 175/407 (42%), Gaps = 42/407 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++TE+ + R+ W+ Y + +P LT + +++ +
Sbjct: 57 VNGKDSFSTEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 116
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF-------- 99
Q+ A+ +L WS V ++TF E ++I F + + YD++ +
Sbjct: 117 EQQQQAKLSLQSWSDVANITFTEVGAGQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIY 176
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ ++ HEIGHALGL HPG YN G D
Sbjct: 177 QGQNLGGQTWYNVNQSNVKHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDAS 236
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + + G+ +Y
Sbjct: 237 YAEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANQTTRTGDTVYGFNS 296
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 297 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 355
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A +
Sbjct: 356 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDTFVFSAVS 415
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ A++ +DF ++++ + + Q +++ +
Sbjct: 416 DSA--PGASDWIKDFQKGIDKIDLSFFNQGAQGGDQIHFVDHFSGAA 460
>gi|47241|emb|CAA39139.1| metalloprotease [Serratia marcescens]
gi|227601|prf||1707277A metalloprotease
Length = 504
Score = 329 bits (844), Expect = 8e-88, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 169/385 (43%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 57 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 116
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 117 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 176
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 177 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVT 236
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 237 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYGFNS 296
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 297 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 355
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 356 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 415
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 416 DSA--PGASDWIRDFQKGIDKIDLS 438
>gi|288958036|ref|YP_003448377.1| secreted protease [Azospirillum sp. B510]
gi|288910344|dbj|BAI71833.1| secreted protease [Azospirillum sp. B510]
Length = 526
Score = 329 bits (842), Expect = 1e-87, Method: Composition-based stats.
Identities = 146/508 (28%), Positives = 223/508 (43%), Gaps = 38/508 (7%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN 85
+ + + +N + R AL WS V +++F E S + +
Sbjct: 40 TYGFLSSSRQVSSGDATGFAAMNTAQRTAVRQALAAWSAVANISFVEISDAASAEIAFGT 99
Query: 86 N-------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
N Y P S+ + + G+ +HEIGHALGL HPG
Sbjct: 100 NRQSGRSAAYAYYPSTGSQGGQVFLANDS-AGNTNPTTGSYSYMTVIHEIGHALGLKHPG 158
Query: 139 SYNGGYP--VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+Y+ G G D++ S+MSY + S GY P + DI A+Q +YG
Sbjct: 159 NYDAGSGSGTEGPYLPAATDNYAYSIMSYNA---NSRLPSGGYLTGPSLYDIAAIQYLYG 215
Query: 197 APKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
A + G+ Y + T++D G + L+ + + +DL +SS GG
Sbjct: 216 ANMSAAPGDTSYTLNTAS-----FTTLWDPNGRNSLNGSAQTTSLS-LDLRGGQFSSAGG 269
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +A T I++ G SGND N+ DV DG +G DT +
Sbjct: 270 -TTFLALAYGTRIQAATGGSGNDTFTVNTLG---------DVLDGGAGTDTVVFSGSRAQ 319
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQ 373
Y++ +F+ + + + L+++E LRF+D S + L Y AS DLI
Sbjct: 320 YRVQQFDGSRYIV-SGADGNALLTNIEFLRFSDGTTALSSASSGSFDALRYIASSADLIG 378
Query: 374 VIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+G + +H GL EGR +T FD Y Y+ Y DL N FG+D AA H+I +G +
Sbjct: 379 ALGANAAAGTQHLISSGLYEGRSLTGFDPYNYIAGYVDLMNAFGADTTAATSHFIAYGYR 438
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGS 491
EGR F L Y AS+ DLI AF + + V++ H+ G EGR +T F++ YL +
Sbjct: 439 EGRGSTLFDTLSYEASNPDLIVAFGNNREAVEL---HYIVSGRFEGRSLTRFNAAAYLAA 495
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGR 519
D+ G A +HY++ G EGR
Sbjct: 496 NPDVNAAVGGSLAGARQHYVSSGFAEGR 523
Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDD 494
+ +F AL YIAS DLI A G H + G EGR + FD Y Y+ Y D
Sbjct: 360 SSGSFDALRYIASSADLIGALGAN---AAAGTQHLISSGLYEGRSLTGFDPYNYIAGYVD 416
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L N FG+D AA H+I +G +EGR F L Y AS+ DLI AF + + V+ H+
Sbjct: 417 LMNAFGADTTAATSHFIAYGYREGRGSTLFDTLSYEASNPDLIVAFGNNREAVEL---HY 473
Query: 555 SNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
G EGRS+T FN YL + D+ G + A QHY++ G EGRALG
Sbjct: 474 IVSGRFEGRSLTRFNAAAYLAANPDVNAAVGGSLAGARQHYVSSGFAEGRALG 526
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSYDD 578
+ +F AL YIAS DLI A AG H + G EGRS+T F+P Y+ Y D
Sbjct: 360 SSGSFDALRYIASSADLIGALGAN---AAAGTQHLISSGLYEGRSLTGFDPYNYIAGYVD 416
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALG-ISGMQFKS 614
L N FG+D +AA H+I +G +EGR + +++
Sbjct: 417 LMNAFGADTTAATSHFIAYGYREGRGSTLFDTLSYEA 453
>gi|199583196|gb|ACH90152.1| insecticidal protein [Serratia marcescens]
Length = 487
Score = 326 bits (835), Expect = 8e-87, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 40 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 99
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 100 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 159
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 160 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVT 219
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 279
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 280 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 338
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 339 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 398
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 399 DSA--PGASDWIRDFQKGIDKIDLS 421
>gi|124518424|gb|ABN13866.1| metalloprotease precursor [Serratia sp. KCK]
Length = 493
Score = 326 bits (835), Expect = 9e-87, Method: Composition-based stats.
Identities = 100/407 (24%), Positives = 175/407 (42%), Gaps = 42/407 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++TE+ + R+ W+ Y + +P LT + +++ +
Sbjct: 46 VNGKDSFSTEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 105
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF-------- 99
Q+ A+ +L WS V ++TF E ++I F + + YD++ +
Sbjct: 106 EQQQQAKLSLQSWSDVANITFTEVGAGQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIY 165
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ ++ HEIGHALGL HPG YN G D
Sbjct: 166 QGQNLGGQTWYNVNQSNVKHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDAS 225
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + + G+ +Y
Sbjct: 226 YAEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANQTTRTGDTVYGFNS 285
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 286 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 344
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A +
Sbjct: 345 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDTFVFSAVS 404
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ A++ +DF ++++ + + Q +++ +
Sbjct: 405 DSA--PGASDWIKDFQKGIDKIDLSFFNQGAQGGDQIHFVDHFSGAA 449
>gi|218198433|gb|EEC80860.1| hypothetical protein OsI_23479 [Oryza sativa Indica Group]
Length = 487
Score = 326 bits (835), Expect = 9e-87, Method: Composition-based stats.
Identities = 98/407 (24%), Positives = 178/407 (43%), Gaps = 42/407 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 40 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 99
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 100 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 159
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 160 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVT 219
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 279
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I ++D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 280 NTGRDFLSTTSNAQKLIFAVWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 338
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 339 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 398
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ A++ +DF ++++ + ++ + +++ +
Sbjct: 399 DSA--PGASDWIRDFQKGIDKIDLSFFNKEAQSSDFIHFVDHFSGAA 443
>gi|47240|emb|CAA39138.1| metalloprotease [Serratia marcescens]
Length = 493
Score = 325 bits (834), Expect = 1e-86, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 169/385 (43%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 46 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 105
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 106 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 165
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 166 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVT 225
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 226 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYGFNS 285
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 286 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 344
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 345 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 404
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 405 DSA--PGASDWIRDFQKGIDKIDLS 427
>gi|117655427|gb|ABK55613.1| insecticidal protein [Serratia marcescens]
Length = 487
Score = 325 bits (833), Expect = 2e-86, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 40 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 99
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 100 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 159
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 160 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVT 219
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 279
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 280 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 338
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 339 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 398
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 399 DSA--PGASDWIRDFQKGIDKIDLS 421
>gi|270264281|ref|ZP_06192548.1| serralysin, precursor [Serratia odorifera 4Rx13]
gi|270041930|gb|EFA15027.1| serralysin, precursor [Serratia odorifera 4Rx13]
Length = 504
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 50/383 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++TE+ + R+ W+ Y + +P LT + +++ +
Sbjct: 57 VNGKDSFSTEQAGLFITRENQTWNGYKVFGQPAKLTFSFPDYKFSSTNVAGDTGLSKFSA 116
Query: 50 NAQEVARWALGEWSKVVDLTFEETS--IHSDIKFISSNNGYVCTPRYDSRYFM------- 100
Q+ A+ +L WS V ++TF E + ++I F + + YD++ +
Sbjct: 117 EQQQQAKLSLQSWSDVANITFTEVAPSQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIY 176
Query: 101 ---------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VD 150
N ++++V HEIGHALGL HPG YN G D
Sbjct: 177 QGQNLGGQTWYNVNQSNVQH--PASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYND 234
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI 209
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 235 ASYAEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANLSTRTGDTVYGF 294
Query: 210 EVQ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
I +D+GG+D D + I+LN +S+S +GG + N+
Sbjct: 295 NSNTGRDFLSTSGNAQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNV 353
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+IA IE+ +G SGNDV++GN+ANNV +GND+ G +G D + A +
Sbjct: 354 SIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDILFGGAGADELWGGAGKDTFVF-- 411
Query: 321 FENAIIVYDANEHKQDFLSDVER 343
V D+ D++ D ++
Sbjct: 412 ----AAVSDSKPGAADWIRDFQK 430
>gi|32172419|sp|P07268|PRZN_SERME RecName: Full=Serralysin; AltName: Full=Extracellular
metalloproteinase; AltName: Full=Serratiopeptidase;
Short=Serrapeptase; Short=Serrapeptidase; AltName:
Full=Zinc proteinase; Flags: Precursor
Length = 487
Score = 324 bits (830), Expect = 3e-86, Method: Composition-based stats.
Identities = 98/407 (24%), Positives = 177/407 (43%), Gaps = 42/407 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 40 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 99
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 100 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 159
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 160 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVT 219
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 279
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 280 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 338
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 339 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 398
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ A++ +DF ++++ + ++ + +++ +
Sbjct: 399 DSA--PGASDWIRDFQKGIDKIDLSFFNKEAQSSDFIHFVDHFSGAA 443
>gi|131125|sp|P23694|PRZN_SERMA RecName: Full=Serralysin; AltName: Full=Extracellular
metalloproteinase; AltName: Full=Zinc proteinase; Flags:
Precursor
gi|47239|emb|CAA39137.1| metalloprotease [Serratia marcescens]
Length = 487
Score = 324 bits (830), Expect = 3e-86, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 169/385 (43%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 40 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 99
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 100 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 159
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 160 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVT 219
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 220 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYGFNS 279
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 280 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 338
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 339 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 398
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 399 DSA--PGASDWIRDFQKGIDKIDLS 421
>gi|157368459|ref|YP_001476448.1| serralysin [Serratia proteamaculans 568]
gi|157320223|gb|ABV39320.1| Serralysin [Serratia proteamaculans 568]
Length = 504
Score = 323 bits (829), Expect = 4e-86, Method: Composition-based stats.
Identities = 98/405 (24%), Positives = 172/405 (42%), Gaps = 42/405 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 57 VNGKDSFSNEQAGLFITRENQTWNGYKVFGQPAKLTFSFPDYKFSSTNVAGDTGLSKFSA 116
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF-------- 99
Q+ A+ +L WS V +LTF E + ++I F + + Y ++ +
Sbjct: 117 EQQQQAKLSLQSWSDVANLTFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIY 176
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ ++ HEIGHALGL HPG YN G D
Sbjct: 177 QGQDLGGQTWYNVNQSNVKHPASEDYGRQTFTHEIGHALGLSHPGEYNAGEGNPTYNDVT 236
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+++Y
Sbjct: 237 YAEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDSVYGFNS 296
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN S+S +GG + N++I
Sbjct: 297 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNETSFSDVGGLKGNVSI 355
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ NNV +GNDV G G D + A ++
Sbjct: 356 AAGVTIENAIGGSGNDVIVGNAVNNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAVS 415
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
++ A++ +DF +++ + + Q +++ +
Sbjct: 416 DSA--PGASDVIKDFQKGTDKIDLSFFNQGKQSGDQIHFVDHFSG 458
>gi|307131038|ref|YP_003883054.1| secreted protease C [Dickeya dadantii 3937]
gi|306528567|gb|ADM98497.1| Secreted protease C precursor [Dickeya dadantii 3937]
Length = 479
Score = 323 bits (829), Expect = 4e-86, Method: Composition-based stats.
Identities = 104/381 (27%), Positives = 174/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 42 VNGKTSYSVDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 102 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 161
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 162 GSSWYNYNQSNIRNPGSEE--YGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 219
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 220 SYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 279
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG+D D + I+LN S+S +GG + N++IA
Sbjct: 280 DFYTATDSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 338
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 339 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 398
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 399 A--AYDWIADFQKGIDKIDLS 417
>gi|131066|sp|P16317|PRTC_ERWCH RecName: Full=Secreted protease C; Short=ProC; Flags: Precursor
gi|24987447|pdb|1K7G|A Chain A, Prtc From Erwinia Chrysanthemi
gi|148488|gb|AAA63638.1| neutral protease large subunit [Erwinia chrysanthemi]
gi|148492|gb|AAA24860.1| metalloprotease C [Erwinia chrysanthemi]
Length = 479
Score = 323 bits (827), Expect = 7e-86, Method: Composition-based stats.
Identities = 104/381 (27%), Positives = 173/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 42 VNGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 102 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 161
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 162 GSSWYNYNQSNIRNPGSEE--YGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 219
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 220 SYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 279
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 280 DFYTATDSSKALIFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 338
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 339 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 398
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 399 A--AYDWIADFQKGIDKIDLS 417
>gi|167487383|gb|ABZ81090.1| metalloprotease [Serratia nematodiphila]
Length = 473
Score = 322 bits (825), Expect = 1e-85, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 40 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 99
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 100 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 159
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 160 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVT 219
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 279
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 280 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 338
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 339 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 398
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 399 DSA--PGASDWIRDFQKGIDKIDLS 421
>gi|157833854|pdb|1SRP|A Chain A, Structural Analysis Of Serratia Protease
Length = 471
Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats.
Identities = 98/407 (24%), Positives = 177/407 (43%), Gaps = 42/407 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 24 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 83
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 84 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 143
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 144 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVT 203
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 204 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 263
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 264 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 322
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 323 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 382
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ A++ +DF ++++ + ++ + +++ +
Sbjct: 383 DSA--PGASDWIRDFQKGIDKIDLSFFNKEAQSSDFIHFVDHFSGAA 427
>gi|24987448|pdb|1K7I|A Chain A, Prtc From Erwinia Chrysanthemi: Y228f Mutant
Length = 479
Score = 321 bits (822), Expect = 3e-85, Method: Composition-based stats.
Identities = 103/381 (27%), Positives = 173/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 42 VNGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 102 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 161
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 162 GSSWYNYNQSNIRNPGSEE--YGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 219
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S+MS++ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 220 SYQFSIMSFWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 279
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 280 DFYTATDSSKALIFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 338
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 339 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 398
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 399 A--AYDWIADFQKGIDKIDLS 417
>gi|3114529|pdb|1AF0|A Chain A, Serratia Protease In Complex With Inhibitor
Length = 471
Score = 320 bits (821), Expect = 4e-85, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 24 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 83
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 84 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 143
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 144 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGDPTYNDVT 203
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 204 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 263
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 264 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 322
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 323 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 382
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 383 DSA--PGASDWIRDFQKGIDKIDLS 405
>gi|1431808|pdb|1SMP|A Chain A, Crystal Structure Of A Complex Between Serratia Marcescens
Metallo-Protease And An Inhibitor From Erwinia
Chrysanthemi
Length = 471
Score = 320 bits (821), Expect = 4e-85, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 24 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 83
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 84 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 143
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 144 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVT 203
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 204 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 263
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 264 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 322
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 323 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 382
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 383 DSA--PGASDWIRDFQKGIDKIDLS 405
>gi|70730574|ref|YP_260315.1| protease PrtA [Pseudomonas fluorescens Pf-5]
gi|68344873|gb|AAY92479.1| protease PrtA [Pseudomonas fluorescens Pf-5]
Length = 482
Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats.
Identities = 103/429 (24%), Positives = 172/429 (40%), Gaps = 45/429 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ A LLRD + + H +S ++ +
Sbjct: 44 VNGKPSFSVDQAATQLLRDGAAYKDLNGNGKIDLTYTFLTSASSSTMYKHGIS-GFSQFS 102
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY-- 98
+ A A+ W+ V ++ F E + D N + P + Y
Sbjct: 103 AQQKAQAVLAMQSWADVANVVFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDG 162
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 163 TSWYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGNPSYKDASYGQDT 222
Query: 158 FLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQ 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+ Y
Sbjct: 223 RGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANYSTRAGDTTYGFNSN 282
Query: 213 ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +++D GG+D LD + I+LN S+S +GG N++IA
Sbjct: 283 TGRDFYSASSSSDKLVFSVWDGGGNDTLDFSGFT-QNQKINLNEASFSDVGGMVGNVSIA 341
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
Q +E+ +G SGND++IGN+A NV +GND+ G+ G D + + S + +
Sbjct: 342 QGVTVENAIGGSGNDLLIGNNAANVLKGGAGNDIIYGAGGADQLWGGSGSDTFVFAASTD 401
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ A + DF+S ++++ D + + +T + D I V
Sbjct: 402 S--KPGAADQIMDFVSGLDKI---DLTGITKGAGLHFVNAFTGAAGDAILTTSGGVSTLS 456
Query: 384 KHFYEFGLS 392
F G++
Sbjct: 457 VDFSGHGVA 465
>gi|157833779|pdb|1SAT|A Chain A, Crystal Structure Of The 50 Kda Metallo Protease From S.
Marcescens
Length = 471
Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats.
Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 42/385 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 24 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 83
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 84 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 143
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 144 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGDPTYADVT 203
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 204 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 263
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 264 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 322
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G SGNDV++GN+ANNV +GNDV G G D + A ++
Sbjct: 323 AAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 382
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
++ A++ +DF ++++ +
Sbjct: 383 DSA--PGASDWIRDFQKGIDKIDLS 405
>gi|271500595|ref|YP_003333620.1| Serralysin [Dickeya dadantii Ech586]
gi|270344150|gb|ACZ76915.1| Serralysin [Dickeya dadantii Ech586]
Length = 478
Score = 320 bits (819), Expect = 6e-85, Method: Composition-based stats.
Identities = 99/379 (26%), Positives = 156/379 (41%), Gaps = 36/379 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N KP Y+ E + RD W+ + K LT L + N
Sbjct: 41 INGKPSYSLEEAGAQITRDNVSWNGANVFGKSANLTFKFLQSARATPDGDTGFVKFNAAQ 100
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-----GYVCTPRYDSRYFMEINFDK 106
A+ AL W+ V ++TF E + + N G + Y
Sbjct: 101 ISQAKLALQSWADVANITFTEVTGNQSANVTFGNYTRDSSGRLDYGSQAYAYLPGSGSAS 160
Query: 107 ADVWRY-------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSF 158
W HEIGHALGL HPG YN G D Y D+
Sbjct: 161 GSTWYNYNVDNIRSPDTMEYGRQTLTHEIGHALGLNHPGDYNAGVGNPSYSDVTYAEDTR 220
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI-------- 209
S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+ IY
Sbjct: 221 QFSIMSYWSEKNTGGDFKGHYAAGPMLDDIEAIQRLYGANMSTRTGDTIYGFHSNTDRDF 280
Query: 210 -EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + I+LN ++S +GG + N++IA I
Sbjct: 281 YTATSSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGAFSDVGGLKGNISIAHGVTI 339
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN ANN +G+D+ G G D + + + ++ +
Sbjct: 340 ENAIGGSGNDLLIGNDANNTLQGGAGDDILYGGGGADRLYGGSGKDTFVYTAVSDSSV-- 397
Query: 329 DANEHKQDFLSDVERLRFA 347
+A + DF + V+++ +
Sbjct: 398 NAPDWILDFQTGVDKIDLS 416
>gi|293393921|ref|ZP_06638228.1| alkaline metalloproteinase [Serratia odorifera DSM 4582]
gi|291423748|gb|EFE96970.1| alkaline metalloproteinase [Serratia odorifera DSM 4582]
Length = 489
Score = 320 bits (819), Expect = 6e-85, Method: Composition-based stats.
Identities = 101/381 (26%), Positives = 170/381 (44%), Gaps = 38/381 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K +TTE+ ++ R W+ + P LT + +++ +
Sbjct: 46 INGKDSFTTEQAGLYITRSNQTWNGKGVFDTPVKLTYAFPDYAFNSANAGGDRGLSKFSV 105
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSNNGYVCTPRYDSRYFMEI--NFD 105
Q+ A+ +L W+ V ++TF E S ++I F + + YD++ + + + +
Sbjct: 106 EQQQQAKLSLQSWADVANITFTEVSGSQKANITFGNYSQDQYGNTDYDTQAYAWLPGSGN 165
Query: 106 KADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
+ Y I + HEIGHALGL HPG YN G D Y D
Sbjct: 166 VSGQSWYNINQSNIQHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPSYKDVSYAED 225
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ--- 212
+ + S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 226 TRMFSLMSYWSETNTGGDNGGHYSAAPLLDDISAIQHLYGANMSTRTGDTVYGFNSNTGR 285
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +D GG D D + I+LN +S+S +GG + N++IA
Sbjct: 286 DFLSTSSNAQKVIFAAWDGGGKDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSIAAGV 344
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGNDV++GN ANN+ +GNDV G G D + A S ++ ++
Sbjct: 345 TIENAIGGSGNDVLVGNQANNLLKGGAGNDVLFGGGGADELWGGAGSDIFVFAAASDS-- 402
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + +DF ++++ +
Sbjct: 403 KSGAADWIRDFQKGIDKIDLS 423
>gi|271500594|ref|YP_003333619.1| Serralysin [Dickeya dadantii Ech586]
gi|270344149|gb|ACZ76914.1| Serralysin [Dickeya dadantii Ech586]
Length = 480
Score = 320 bits (819), Expect = 6e-85, Method: Composition-based stats.
Identities = 103/382 (26%), Positives = 165/382 (43%), Gaps = 41/382 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ + R+ W+ I K LT L + N
Sbjct: 42 INDKASYSVDQAVSQITRENTTWNGSNILGKSASLTFKFLQSASSTPAGDTGFVKFNAEQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTPR-YDSR 97
A+ AL W+ V +LTF E + + N Y P Y
Sbjct: 102 IAQAKLALQSWADVANLTFTEVTGNKSANITFGNYTRDASGNLDYDTQAYAYYPGQYQGA 161
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP--VYGVDNDYEN 155
N++++++ G HEIGHALGL HP YN G Y Y
Sbjct: 162 GSSWYNYNQSNIRSPGT--EDYGRQTLTHEIGHALGLSHPAEYNAGEGDISYKNSAAYAE 219
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI----- 209
DS S+MSY+ +D+ D Y A P++ DI A+QK+YGA + G+ +Y
Sbjct: 220 DSRQFSIMSYWDVEDTGGDFRGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFHSNTD 279
Query: 210 ----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I +++D+GG+D D + I+LN ++S +GG + N++IA
Sbjct: 280 RDFYTATDSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGAFSDVGGLKGNVSIAHG 338
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT A + +++
Sbjct: 339 VTIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLTGGAGRDTFVYGSGQDST 398
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
+ A + DF + V+++ +
Sbjct: 399 V--SAYDWITDFQTGVDKIDLS 418
>gi|77458903|ref|YP_348409.1| epralysin. metallo peptidase. MEROPS family M10B [Pseudomonas
fluorescens Pf0-1]
gi|77382906|gb|ABA74419.1| metalloprotease [Pseudomonas fluorescens Pf0-1]
Length = 486
Score = 320 bits (819), Expect = 7e-85, Method: Composition-based stats.
Identities = 102/429 (23%), Positives = 168/429 (39%), Gaps = 45/429 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ A LLRD + + H +S ++ +
Sbjct: 48 VNGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMYKHGIS-GFSQFS 106
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY-- 98
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 107 TQQKAQAVLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDG 166
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
+ HEIGH LGL HPG YN G D Y D+
Sbjct: 167 TSWYLINSGYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDT 226
Query: 158 FLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 227 RGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANLTTRTGDTTYGFNSN 286
Query: 213 ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +++D+GG D D + I+LN S+S +GG N++IA
Sbjct: 287 AGRDFLSASSSADKLVFSVWDAGGKDTFDFSGFT-QNQKINLNEASFSDVGGLVGNVSIA 345
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ IE+ +G SGND++IGNSA N +GND+ G+ G D + A S + +
Sbjct: 346 KGVTIENAIGGSGNDLLIGNSAANELKGGAGNDIIWGAGGADKLWGGAGSDTFVFAASSD 405
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ A + DF+S ++++ D + + +T + D +
Sbjct: 406 S--KPGAIDQILDFVSGLDKI---DLTGITNGAGLHFVSAFTGAAGDAVLTSSGGNSLLS 460
Query: 384 KHFYEFGLS 392
F G++
Sbjct: 461 VDFSGHGVA 469
>gi|307131037|ref|YP_003883053.1| secreted protease A [Dickeya dadantii 3937]
gi|306528566|gb|ADM98496.1| Secreted protease A precursor [Dickeya dadantii 3937]
Length = 477
Score = 319 bits (818), Expect = 8e-85, Method: Composition-based stats.
Identities = 99/379 (26%), Positives = 159/379 (41%), Gaps = 36/379 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N KP Y+ E + + RD W+ + K LT L + N
Sbjct: 40 INGKPSYSIEDAGEQITRDNVSWNGSNVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQ 99
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS-----RYFMEINFDK 106
A+ AL W+ + ++TF E + + N + R D Y
Sbjct: 100 VAQAKLALQSWADLANITFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSAS 159
Query: 107 ADVWRY-------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSF 158
W K HEIGHALGL HPG YN G D Y D+
Sbjct: 160 GTTWYNYNVDNIRSPDKMEYGRQTLTHEIGHALGLNHPGDYNAGEGNPTYSDVTYAEDTR 219
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE------- 210
S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+ +Y
Sbjct: 220 QFSIMSYWSEKNTGGDFKGHYAAGPMLDDIDAIQRLYGANMTTRTGDTVYGFNSNTDRDF 279
Query: 211 --VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + I+LN S S +GG + N++IA I
Sbjct: 280 YTATSSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGSLSDVGGLKGNVSIAHGVTI 338
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN+A+N+ +G+D+ G G D + + + ++ +
Sbjct: 339 ENAIGGSGNDLLIGNNADNILRGGAGDDILYGGGGADRLYGGSGRDTFVYTAVSDSKVA- 397
Query: 329 DANEHKQDFLSDVERLRFA 347
A + DF + V+++ +
Sbjct: 398 -APDWILDFQTGVDKIDLS 415
>gi|24987449|pdb|1K7Q|A Chain A, Prtc From Erwinia Chrysanthemi: E189a Mutant
Length = 479
Score = 318 bits (816), Expect = 1e-84, Method: Composition-based stats.
Identities = 103/381 (27%), Positives = 172/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 42 VNGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 102 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 161
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + H IGHALGL HPG YN G D Y D
Sbjct: 162 GSSWYNYNQSNIRNPGSEE--YGRQTFTHAIGHALGLAHPGEYNAGEGDPSYNDAVYAED 219
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 220 SYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 279
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 280 DFYTATDSSKALIFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 338
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 339 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 398
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 399 A--AYDWIADFQKGIDKIDLS 417
>gi|251789714|ref|YP_003004435.1| Serralysin [Dickeya zeae Ech1591]
gi|247538335|gb|ACT06956.1| Serralysin [Dickeya zeae Ech1591]
Length = 478
Score = 318 bits (816), Expect = 2e-84, Method: Composition-based stats.
Identities = 100/379 (26%), Positives = 156/379 (41%), Gaps = 36/379 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N KP Y+ E D + RD W+ + K LT L + N
Sbjct: 41 INGKPSYSIEEAGDQITRDNVSWNGANVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQ 100
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-----GYVCTPRYDSRYFMEINFDK 106
A+ AL W+ V ++TF E + + N G + Y
Sbjct: 101 ISQAKLALQSWADVANVTFTEVTGNQSANVTFGNYTRDSSGRLDYGSQAYAYLPGSGSAS 160
Query: 107 ADVWRY-------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSF 158
W HEIGHALGL HPG YN G D Y D+
Sbjct: 161 GTTWYNYNVDNIRSPDTMEYGRQTLTHEIGHALGLNHPGDYNAGEGNPSYSDVTYAEDTR 220
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE------- 210
S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+ +Y
Sbjct: 221 QFSIMSYWSEKNTGGDFKGHYAAGPMLDDIAAIQRLYGANMTTRTGDTVYGFNSNTDRDF 280
Query: 211 --VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I + +D+GG+D D + I+LN S S +GG + N++IA+ I
Sbjct: 281 YTATSSSKALIFSAWDAGGNDTFDFSGYSN-NQRINLNEGSLSDVGGLKGNVSIAEGVTI 339
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN+A+N +G+DV G SG D + + + ++ +
Sbjct: 340 ENAIGGSGNDLLIGNNADNTLRGGAGDDVLFGGSGADRLYGGSGRDTFVYSATSDSKVA- 398
Query: 329 DANEHKQDFLSDVERLRFA 347
A + DF + +++ +
Sbjct: 399 -APDWILDFQTGTDKIDLS 416
>gi|3169102|emb|CAA76737.1| serralysin [Pseudomonas sp. 'TAC II 18']
Length = 480
Score = 318 bits (816), Expect = 2e-84, Method: Composition-based stats.
Identities = 101/382 (26%), Positives = 159/382 (41%), Gaps = 38/382 (9%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP +T +++AD L R W + P V R ++ +
Sbjct: 41 LVNGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLGTFSQFSA 100
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 101 LQKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGES 160
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 161 WYLINKDYQVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYAEDTRA 220
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ +++ + Y + P++ DI AVQK+YGA + + +Y
Sbjct: 221 YSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGFNSTAD 280
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I +++D GG+D LD + I+L S+S +GG N++IAQ
Sbjct: 281 RDFYSATSSTDKLIFSVWDGGGNDTLDFSGFS-QNQKINLTAGSFSDVGGMTGNVSIAQG 339
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +G SGND++IGN A NV +GND+ G G D + S + ++
Sbjct: 340 VTIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGADVLWGGTGSDTFVFGAVSDS- 398
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF S +++
Sbjct: 399 -TPKAADIIKDFQSGFDKIDLT 419
>gi|227113041|ref|ZP_03826697.1| metalloprotease [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 476
Score = 318 bits (814), Expect = 3e-84, Method: Composition-based stats.
Identities = 102/377 (27%), Positives = 163/377 (43%), Gaps = 34/377 (9%)
Query: 3 NIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR----YFMEINFDKAD 108
+ A+ +L WS V ++TF + S N + R D +M N A
Sbjct: 100 QQAKLSLQSWSDVANITFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSAAG 159
Query: 109 VWRYGIGKGT-------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFLT 160
+ T HEIGHALGL HPG YN G D Y D+
Sbjct: 160 SAWFNYNSDTVRNPATEYGKQTLTHEIGHALGLNHPGDYNAGEGNPTYRDVTYAEDTRQF 219
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE--------- 210
S+MSY+ Q++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 SLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDFYT 279
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I +++D+GG+D D + I+LN +S +GG + N++IA IE+
Sbjct: 280 TTSNSQKLIFSVWDAGGNDTFDFSGY-RNDQRINLNEGGFSDVGGLKGNVSIAHGVTIEN 338
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+G SGND++IGN ANN+ +G+DV G G DT A ++ +Y + +
Sbjct: 339 AIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTLTGGAGKDIF-VYASASDSSYKNG 397
Query: 331 NEHKQDFLSDVERLRFA 347
+ DF ++++ +
Sbjct: 398 YDTITDFQRGIDKIDLS 414
>gi|50236481|gb|AAT71322.1| metalloprotease [Pseudomonas fluorescens]
Length = 482
Score = 318 bits (814), Expect = 3e-84, Method: Composition-based stats.
Identities = 103/429 (24%), Positives = 172/429 (40%), Gaps = 45/429 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ A LLRD + + H +S ++ +
Sbjct: 44 VNGKPSFSVDQAATQLLRDGAAYKDLNGNGKIDLTYTFLTSASSSTMYKHGIS-GFSQFS 102
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY-- 98
+ A A+ W+ V ++ F E + D N + P + Y
Sbjct: 103 AQQKAQAVLAMQSWADVANVVFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDG 162
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 163 TSWYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGNPSYKDASYGQDT 222
Query: 158 FLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQ 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+ Y
Sbjct: 223 RGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANYSTRAGDTTYGFNSN 282
Query: 213 ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +++D GG+D LD + I+LN S+S +GG N++IA
Sbjct: 283 TGRDFYSASSSSDKLVFSVWDGGGNDTLDFSGFT-QNQKINLNEASFSDVGGMVGNVSIA 341
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
Q +E+ +G SGND++IGN+A NV +GND+ G+ G D + + S + +
Sbjct: 342 QGVTVENAIGGSGNDLLIGNNAANVLKGGAGNDIIFGAGGADQLWGGSGSDTFVFAASTD 401
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ A + DF+S ++++ D + + +T + D I V
Sbjct: 402 S--KPGAADQIMDFVSGLDKI---DLSGFTKGAGLHFVNAFTGATGDAILTTSGGVSTLS 456
Query: 384 KHFYEFGLS 392
F G++
Sbjct: 457 VDFSGHGVA 465
>gi|104780724|ref|YP_607222.1| alkaline metalloprotease precursor AprA [Pseudomonas entomophila
L48]
gi|95109711|emb|CAK14412.1| Alkaline metalloprotease precursor AprA [Pseudomonas entomophila
L48]
Length = 485
Score = 317 bits (812), Expect = 4e-84, Method: Composition-based stats.
Identities = 98/384 (25%), Positives = 157/384 (40%), Gaps = 43/384 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLT----------THRLSFDITELNPN 50
N KP YT ++ A++LLRD W + + R ++ +
Sbjct: 42 VNGKPSYTVDQAANYLLRDGAAWKDLNKDGTISLSYTFLTKAPSDFYSRGLGTFSQFSDL 101
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTP-----RYDSRY 98
+ A+ A+ W+ V +TF E + D N + P +
Sbjct: 102 QKGQAKLAMQSWADVAKVTFTEAASGGDGHMTFGNFSASNGGAAFAYLPFDMPGSHKGES 161
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDS 157
+ IN G G HEIGH LGL HPG YN G D Y D+
Sbjct: 162 WYLINSSYQ--VNTTPGTGNYGRQTLTHEIGHVLGLSHPGDYNAGEGNPTYRDATYAQDT 219
Query: 158 FLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE-- 210
SVMSY+ ++ + Y + P++ DI A+QK+YGA + G+ +Y
Sbjct: 220 RGYSVMSYWSESNTGQNFVKAGGQYYASAPLMDDIAAIQKLYGANYATRSGDTVYGFNSN 279
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D GG+D D + I+LN S+S +GG N++IA
Sbjct: 280 ADRDFYSATSSSSKLVFSVWDGGGNDTFDFSGFT-QNQKINLNETSFSDVGGMIGNVSIA 338
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ IE+ G SGND++IGN+ NV +GND+ G G D + + + +
Sbjct: 339 KGVTIENAFGGSGNDLLIGNALANVLKGGAGNDIIYGGGGADQLWGGTGADTFVFGAISD 398
Query: 324 AIIVYDANEHKQDFLSDVERLRFA 347
+ A + DF S +++ +
Sbjct: 399 S--TKAAPDRIMDFTSGQDKIDLS 420
>gi|24987255|pdb|1GO8|P Chain P, The Metzincin's Methionine: Prtc M226l Mutant
Length = 462
Score = 317 bits (811), Expect = 5e-84, Method: Composition-based stats.
Identities = 103/381 (27%), Positives = 173/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 25 VNGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 84
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 85 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 144
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 145 GSSWYNYNQSNIRNPGSEE--YGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 202
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S++SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 203 SYQFSILSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 262
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 263 DFYTATDSSKALIFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 321
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 322 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 381
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 382 A--AYDWIADFQKGIDKIDLS 400
>gi|261822160|ref|YP_003260266.1| Serralysin [Pectobacterium wasabiae WPP163]
gi|261606173|gb|ACX88659.1| Serralysin [Pectobacterium wasabiae WPP163]
Length = 474
Score = 317 bits (811), Expect = 5e-84, Method: Composition-based stats.
Identities = 103/377 (27%), Positives = 161/377 (42%), Gaps = 34/377 (9%)
Query: 3 NIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L + + +
Sbjct: 38 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVKSIPSGDQGFVKFSAAQE 97
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR----YFMEINFDKAD 108
A+ +L WS V +LTF E S N + + D +M N A
Sbjct: 98 HQAKLSLQSWSDVANLTFTEVSPTQKATITFGNYTRDSSGKMDYDTQAYAYMPGNHSAAG 157
Query: 109 VWRYGIGKGT-------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFLT 160
+ T HEIGHALGL HPGSYN G D Y D+
Sbjct: 158 SAWFNYNAETVRDPTTEYGKQTLTHEIGHALGLNHPGSYNAGEGDPTYRDVTYAEDTRQF 217
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ------- 212
S+MSY+ Q++ D + Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 218 SLMSYWSEQNTGGDFQWHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNADRDFYS 277
Query: 213 --QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I +++D+GG+D D + I+L +S +GG + N++IA IE+
Sbjct: 278 AHSNSDKLIFSVWDAGGNDTFDFSGY-RDDQRINLTEGGFSDVGGLKGNVSIAHGVTIEN 336
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+G SGND++IGN ANN+ +GNDV G G D A ++ +Y +
Sbjct: 337 AIGGSGNDIIIGNDANNILQGGAGNDVIYGGGGADILTGGAGKDIF-VYASASDSSYKSG 395
Query: 331 NEHKQDFLSDVERLRFA 347
+ DF ++++ +
Sbjct: 396 YDIITDFQRGIDKIDLS 412
>gi|4115623|dbj|BAA36461.1| alkaline protease [Pseudomonas fluorescens]
Length = 482
Score = 316 bits (810), Expect = 7e-84, Method: Composition-based stats.
Identities = 110/435 (25%), Positives = 172/435 (39%), Gaps = 50/435 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N KP +T ++ ADHLLR+ + + K D+ T S ++ N
Sbjct: 37 VNGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASNATMNKHGITGFSQFNT 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV 109
+ A A+ W+ V ++TF E + D N Y N +
Sbjct: 97 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNAKYNES 156
Query: 110 WRYG---------------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDY 153
G HEIGH LGL HPG YN G D DY
Sbjct: 157 GLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADY 216
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 217 GQDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGANYNTRAGDTTYG 276
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ +++D GG+D LD + I+LN S+S +GG N
Sbjct: 277 FNSNTGRDFLSATSSADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNETSFSDVGGLVGN 335
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA+ +E+ G SGND++IGN+A N+ +GND+ G G D + A S +
Sbjct: 336 VSIAKGVTVENAFGGSGNDLLIGNAAANILKGGAGNDIIYGGGGADQLWGGAGSDTFVFG 395
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED--LIQVIGQ 377
++ A + DF S +++ D + + +T D L G
Sbjct: 396 SSSDS--KPGAADKIFDFTSGSDKI---DLTGITKGAGLTFVNAFTGHAGDAVLSYASGT 450
Query: 378 DVFESMKHFYEFGLS 392
++ F G++
Sbjct: 451 NLGTLAVDFSGHGVA 465
>gi|229590602|ref|YP_002872721.1| metalloprotease [Pseudomonas fluorescens SBW25]
gi|229362468|emb|CAY49374.1| metalloprotease [Pseudomonas fluorescens SBW25]
Length = 477
Score = 316 bits (810), Expect = 7e-84, Method: Composition-based stats.
Identities = 104/428 (24%), Positives = 173/428 (40%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 37 INGKPSYTVDQAATQLLRDGATYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNA 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 97 QQKAQAVLAMQSWADVANITFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 217 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+LN S+S +GG N++IA+
Sbjct: 277 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNEASFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ G +GND++IGN+A N+ +GND+ G G D + A + + ++
Sbjct: 336 GVTIENAFGGAGNDLIIGNNAANIIKGGAGNDLIYGGGGADQLWGGAGNDTFVFGASSDS 395
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A++ DF S +++ + + + + A L G ++
Sbjct: 396 --KPGASDKIFDFTSGSDKIDLSGITKGA-GLTFVNAFTGHAGDAVLTYAAGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|227326952|ref|ZP_03830976.1| metalloprotease [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 476
Score = 316 bits (809), Expect = 8e-84, Method: Composition-based stats.
Identities = 103/377 (27%), Positives = 164/377 (43%), Gaps = 34/377 (9%)
Query: 3 NIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR----YFMEINFDKAD 108
+ A+ +L WS V ++TF + S N + R D +M N A
Sbjct: 100 QQAKLSLQSWSDVANITFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSAAG 159
Query: 109 VWRYGIGKGT-------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFLT 160
+ T HEIGHALGL HPGSYN G D Y D+
Sbjct: 160 SAWFNYNSDTVRNPATEYGKQTLTHEIGHALGLNHPGSYNAGEGNPTYRDVTYAEDTRQF 219
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE--------- 210
S+MSY+ Q++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 SLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDFYT 279
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I +++D+GG+D D + I+LN +S +GG + N++IA IE+
Sbjct: 280 TTSNSQKLIFSVWDAGGNDTFDFSGY-RNDQRINLNEGGFSDVGGLKGNVSIAHGVTIEN 338
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+G SGND++IGN ANN+ +G+DV G G DT A ++ +Y + +
Sbjct: 339 AIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTLTGGAGKDIF-VYASASDSSYKNG 397
Query: 331 NEHKQDFLSDVERLRFA 347
+ DF ++++ +
Sbjct: 398 YDTIMDFQRGIDKIDLS 414
>gi|164665001|gb|ABY65932.1| AprX [Pseudomonas fluorescens]
Length = 477
Score = 316 bits (809), Expect = 8e-84, Method: Composition-based stats.
Identities = 104/428 (24%), Positives = 173/428 (40%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 37 INGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNA 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 97 QQKAQAVLAMQSWADVANITFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 217 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+LN S+S +GG N++IA+
Sbjct: 277 GRGFLSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNEASFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ G +GND++IGN+A N+ +GND+ G G D + A + + ++
Sbjct: 336 GVTIENAFGGAGNDLIIGNNAANIIKGGAGNDLIYGGGGADQLWGGAGNDTFVFGASSDS 395
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A++ DF S +++ + + + + A L G ++
Sbjct: 396 --KPGASDKIFDFTSGSDKIDLSGITKGA-GLTFVNAFTGHAGDAVLTYAAGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|4063015|gb|AAD09851.1| protease PrtA [Pseudomonas fluorescens]
Length = 477
Score = 316 bits (809), Expect = 1e-83, Method: Composition-based stats.
Identities = 106/428 (24%), Positives = 172/428 (40%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP Y+ +++A LLRD + + K D+ T S ++ N
Sbjct: 37 VNGKPSYSVDQVATQLLRDGAAYRDVNGNGKIDLTYTFLTSASSSTLNKHGISGFSQFNA 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
++ A A+ WS V ++TF E + D N + P + Y
Sbjct: 97 QQKDQAVLAMQSWSDVANVTFTEKATGGDTHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 217 GYSVMSYWSESNTNQNFSKGGVEAYASGPLLDDIAAIQKLYGANYNTRAGDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+LN S+S +GG N++IA+
Sbjct: 277 GRDFYSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNEASFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ G +GND++IGN+A NV +GND+ G G D + A + + ++
Sbjct: 336 GVTIENAFGGAGNDLIIGNNAANVIKGGAGNDIIYGGGGADQLWGGAGNDTFVFGSSSDS 395
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + DF S +++ + + + + A L G ++
Sbjct: 396 --KPGAADKIFDFTSGSDKIDLSGITKGA-GLTFVNAFTGHAGDAVLTYAAGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|5733435|gb|AAD49575.1|AF141295_1 metalloprotease [Pectobacterium carotovorum subsp. carotovorum]
Length = 473
Score = 315 bits (808), Expect = 1e-83, Method: Composition-based stats.
Identities = 103/377 (27%), Positives = 160/377 (42%), Gaps = 35/377 (9%)
Query: 3 NIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L + + +
Sbjct: 38 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVKSIPSGDQGFVKFSAAQE 97
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR----YFMEINFDKAD 108
A+ +L WS V +LTF E S N + + D +M N A
Sbjct: 98 HQAKLSLQSWSDVANLTFTEVSPTQKATITFGNYTRDSSGKMDYDTQAYAYMPGNHSAAG 157
Query: 109 VWRYGIGKGT-------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFLT 160
+ T HEIGHALGL HPGSYN G D Y D+
Sbjct: 158 SAWFNYNAETVRDPTTEYGKQTLTHEIGHALGLNHPGSYNAGEGDPTYRDVTYAEDTRQF 217
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ------- 212
S+MSY+ Q++ D + Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 218 SLMSYWSEQNTGGDFQWHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNADRDFYS 277
Query: 213 --QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I +++D+GG+D D + I+L +S +GG + N++IA IE+
Sbjct: 278 AHSNSDKLIFSVWDAGGNDTFDFSGY-RDDQRINLTEGGFSDVGGLKGNVSIAHGVTIEN 336
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+G SGND++IGN ANN+ +GNDV G G D A ++ + Y +
Sbjct: 337 AIGGSGNDIIIGNDANNILQGGAGNDVIYGGGGADILTGGAGKDIF--VYASASDSSYKS 394
Query: 331 NEHKQDFLSDVERLRFA 347
DF ++++ +
Sbjct: 395 GYDITDFQRGIDKIDLS 411
>gi|730410|sp|Q07295|PRTA_ERWCH RecName: Full=Secreted protease A; Short=ProA; Flags: Precursor
gi|297898|emb|CAA49611.1| protease A [Erwinia chrysanthemi]
Length = 472
Score = 315 bits (807), Expect = 2e-83, Method: Composition-based stats.
Identities = 98/378 (25%), Positives = 156/378 (41%), Gaps = 39/378 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N KP Y+ E D + RD W+ + K LT L + N
Sbjct: 40 INGKPSYSIEDAGDQITRDNVSWNGSNVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQ 99
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS-----RYFMEINFDK 106
A+ AL W+ + ++TF E + + N + R D Y
Sbjct: 100 VAQAKLALQSWADLANITFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSAS 159
Query: 107 ADVWRY-------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
W K HEIGHALGL HPG YN G Y D+
Sbjct: 160 GTTWYNYNVDNIRSPDKMEYGRQTLTHEIGHALGLNHPGDYNAGEGNP----TYREDTRQ 215
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE-------- 210
S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+ +Y
Sbjct: 216 FSIMSYWSEKNTGGDFKGHYAAGPMLDDIDAIQRLYGANMTTRTGDTVYGFNSNTDRDFY 275
Query: 211 -VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I +++D+GG D + I+LN S S +GG + N++IA IE
Sbjct: 276 TATSSSKALIFSVWDAGGKHTFDFSGYSN-NQRINLNEGSLSDVGGLKGNVSIAHGVTIE 334
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ +G SGND++IGN+A+N+ +G+D+ G G D + + + ++ +
Sbjct: 335 NAIGGSGNDLLIGNNADNILRGGAGDDILYGGGGADRLYGGSGRDTFVYTAVSDSKVA-- 392
Query: 330 ANEHKQDFLSDVERLRFA 347
A + DF + V+++ +
Sbjct: 393 APDWILDFQTGVDKIDLS 410
>gi|254574998|pdb|3HBU|P Chain P, Prtc Methionine Mutants: M226h Desy
Length = 462
Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats.
Identities = 103/381 (27%), Positives = 172/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 25 VNGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 84
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 85 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 144
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 145 GSSWYNYNQSNIRNPGSEE--YGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 202
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S+ SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 203 SYQFSIHSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 262
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 263 DFYTATDSSKALIFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 321
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 322 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 381
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 382 A--AYDWIADFQKGIDKIDLS 400
>gi|242556628|pdb|3HBV|P Chain P, Prtc Methionine Mutants: M226a In-House
gi|242556638|pdb|3HDA|P Chain P, Prtc Methionine Mutants: M226a_desy
Length = 462
Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats.
Identities = 103/381 (27%), Positives = 172/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 25 VNGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 84
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 85 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 144
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 145 GSSWYNYNQSNIRNPGSEE--YGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 202
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S+ SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 203 SYQFSIASYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 262
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 263 DFYTATDSSKALIFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 321
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 322 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 381
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 382 A--AYDWIADFQKGIDKIDLS 400
>gi|9438187|gb|AAF87588.1|AF286062_1 AprA [Pseudomonas brassicacearum]
Length = 487
Score = 314 bits (805), Expect = 3e-83, Method: Composition-based stats.
Identities = 101/429 (23%), Positives = 170/429 (39%), Gaps = 45/429 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP Y+ + A LLRD + + H +S ++ +
Sbjct: 49 VNGKPSYSVDEAATQLLRDGAAYQDRDGSGKIELTYTFLTSASSSTMNKHGIS-GFSQFS 107
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY-- 98
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 108 AQQKGQAALAMQSWADVANVTFAEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDG 167
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD-NDYENDS 157
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 168 TSWYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGSPTYDDATYGQDT 227
Query: 158 FLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G++ Y
Sbjct: 228 RGYSVMSYWSESNTDQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDSTYGFNSN 287
Query: 213 ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +++D+GG D LD + I+LN S+S +GG N++IA
Sbjct: 288 TGRDFLSASSSSDKVVFSVWDAGGRDTLDFSGFT-QNQKINLNDASFSDVGGMVGNVSIA 346
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ VIE+ +G +G+D++IGNS N +GND+ G+ G D + + S + +
Sbjct: 347 KGAVIENAIGGAGSDLLIGNSVANELKGGAGNDILWGAGGADKLWGGSGSDTFVFAASSD 406
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ A + DF+S ++++ D + + T + D +
Sbjct: 407 S--RPGATDQILDFVSGLDKI---DLTGITKGAGLHFVSALTGAAGDAVLSTSAGNSLLS 461
Query: 384 KHFYEFGLS 392
F G++
Sbjct: 462 VDFSGHGVA 470
>gi|253988086|ref|YP_003039442.1| hypothetical protein PAU_00605 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779536|emb|CAQ82697.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 484
Score = 314 bits (805), Expect = 3e-83, Method: Composition-based stats.
Identities = 95/368 (25%), Positives = 153/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYNFLESKPDDMPWHI--SEFSAFNEEQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ETS + T Y Y + W
Sbjct: 109 IQSWADVANINFVETSDVKEANITFGFFDVSLTGSYAFAYLPRPEKTQLGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 TNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q++YGA + + IY ++S
Sbjct: 229 SEKNTGQDFKGIYSSAPLLNDISAIQEVYGANNTTRTDDTIYGFNSNTERDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDAGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A+N +G+D+ G G D + + + + + + D
Sbjct: 348 NDVLIGNDADNTLKGGAGDDIIYGGLGADNLWGGEGKDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGEDKI 413
>gi|28948337|pdb|1G9K|A Chain A, Crystal Structure Of A Psychrophilic Alkaline Protease
From Pseudomonas Tac Ii 18
gi|34811434|pdb|1O0Q|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 1 Mm Edta
gi|34811435|pdb|1O0T|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 5 Mm Edta (5
Days)
gi|34811441|pdb|1OM6|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 5mm Edta (2
Months)
gi|34811442|pdb|1OM7|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Soaked In 85 Mm Edta
gi|34811443|pdb|1OM8|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallyzed With 10 Mm Edta
gi|34811444|pdb|1OMJ|A Chain A, Crystal Structure Of A Psychrophilic Alkaline Protease
From Pseudomonas Tac Ii 18
Length = 463
Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats.
Identities = 101/382 (26%), Positives = 159/382 (41%), Gaps = 38/382 (9%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP +T +++AD L R W + P V R ++ +
Sbjct: 24 LVNGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLGTFSQFSA 83
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 84 LQKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGES 143
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 144 WYLINKDYQVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYAEDTRA 203
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ +++ + Y + P++ DI AVQK+YGA + + +Y
Sbjct: 204 YSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGFNSTAD 263
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I +++D GG+D LD + I+L S+S +GG N++IAQ
Sbjct: 264 RDFYSATSSTDKLIFSVWDGGGNDTLDFSGFS-QNQKINLTAGSFSDVGGMTGNVSIAQG 322
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +G SGND++IGN A NV +GND+ G G D + S + ++
Sbjct: 323 VTIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGADVLWGGTGSDTFVFGAVSDS- 381
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF S +++
Sbjct: 382 -TPKAADIIKDFQSGFDKIDLT 402
>gi|50121709|ref|YP_050876.1| metalloprotease [Pectobacterium atrosepticum SCRI1043]
gi|49612235|emb|CAG75685.1| metalloprotease [Pectobacterium atrosepticum SCRI1043]
Length = 469
Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats.
Identities = 102/376 (27%), Positives = 158/376 (42%), Gaps = 43/376 (11%)
Query: 4 IKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNAQE 53
KP +T+E+ ++RD W+ + K LT L + + ++
Sbjct: 43 GKPSFTSEQAGWQIVRDGLTWNGTNVFGKSADLTYSFLQNVKSIPSGDQGFVKFSAAQEQ 102
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR----YFMEINFDKADV 109
A+ +L WS V +LTF + S N + R D +M N A
Sbjct: 103 QAKLSLQSWSDVANLTFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSAAGS 162
Query: 110 WRYGIGKGT-------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFLTS 161
+ T HEIGHALGL HPG YN G D Y D+ S
Sbjct: 163 AWFNYNADTVRNPATEYGKQTLTHEIGHALGLNHPGDYNAGEGNPTYRDVTYAEDTRQYS 222
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIE---------V 211
+MSY+ Q++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 223 LMSYWSEQNTGGDFKGHYAAGPLIDDIAAIQLLYGANMDTRTGDTVYGFNSNTGRDFYTT 282
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
I +++D+GG+D D + IDLN +S +GG + N++IA IE+
Sbjct: 283 NSNSQKLIFSVWDAGGNDTFDFSGY-KDNQIIDLNEGRFSDVGGLKGNVSIAHGVTIENA 341
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G SGND++IGNSA+N+ +G D G +G D F Y + S ++
Sbjct: 342 IGGSGNDIIIGNSADNILQGGAGADTLTGGAGKDIFVYASASDSSNTTGYDT-------- 393
Query: 332 EHKQDFLSDVERLRFA 347
DF ++++ +
Sbjct: 394 --ITDFQRGIDKIDLS 407
>gi|253687942|ref|YP_003017132.1| Serralysin [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754520|gb|ACT12596.1| Serralysin [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 476
Score = 314 bits (804), Expect = 4e-83, Method: Composition-based stats.
Identities = 103/377 (27%), Positives = 163/377 (43%), Gaps = 34/377 (9%)
Query: 3 NIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNAQ 52
N KP +T++ A ++RD W+ + K LT L + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR----YFMEINFDKAD 108
+ A+ +L WS V ++TF + S N + R D +M N A
Sbjct: 100 QQAKLSLQSWSDVANVTFTQVSPTQKATITFGNYTRDSSGRLDYDTQAYAYMPGNHSAAG 159
Query: 109 VWRYGIGKGT-------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFLT 160
+ T HEIGHALGL HPGSYN G D Y D+
Sbjct: 160 SAWFNYNSDTVRNPATEYGKQTLTHEIGHALGLNHPGSYNAGEGNPTYRDVTYAEDTRQF 219
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE--------- 210
S+MSY+ Q++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 SLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDFYS 279
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I +++D+GG D D + I+LN +S +GG + N++IA IE+
Sbjct: 280 ANSSSDKLIFSVWDAGGTDTFDFSGY-RNDQRINLNEGGFSDVGGLKGNVSIAHGVTIEN 338
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+G SGND++IGN ANN+ +G+DV G G DT A ++ +Y + +
Sbjct: 339 AIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTLTGGAGKDIF-VYASASDSSYKNG 397
Query: 331 NEHKQDFLSDVERLRFA 347
+ DF ++++ +
Sbjct: 398 YDTITDFQRGIDKIDLS 414
>gi|24987254|pdb|1GO7|P Chain P, The Metzincin's Methionine: Prtc M226c-E189k Double Mutant
Length = 462
Score = 313 bits (803), Expect = 4e-83, Method: Composition-based stats.
Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 25 VNGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 84
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 85 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 144
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + H+IGHALGL HPG YN G D Y D
Sbjct: 145 GSSWYNYNQSNIRNPGSEE--YGRQTFTHKIGHALGLAHPGEYNAGEGDPSYNDAVYAED 202
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S+ SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 203 SYQFSICSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 262
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 263 DFYTATDSSKALIFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 321
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 322 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 381
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 382 A--AYDWIADFQKGIDKIDLS 400
>gi|330809663|ref|YP_004354125.1| Alkaline metalloproteinase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377771|gb|AEA69121.1| Alkaline metalloproteinase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 485
Score = 313 bits (803), Expect = 5e-83, Method: Composition-based stats.
Identities = 101/429 (23%), Positives = 170/429 (39%), Gaps = 45/429 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP Y+ + A LLRD + + H +S ++ +
Sbjct: 47 VNGKPSYSVDEAATQLLRDGAAYQDRDGSGKIELTYTFLTSASSSTMNKHGIS-GFSQFS 105
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY-- 98
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 106 AQQKGQAALAMQSWADVANVTFAEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDG 165
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD-NDYENDS 157
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 166 TSWYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGSPTYDDATYGQDT 225
Query: 158 FLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G++ Y
Sbjct: 226 RGYSVMSYWSESNTDQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDSTYGFNSN 285
Query: 213 ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +++D+GG D LD + I+LN S+S +GG N++IA
Sbjct: 286 TGRDFLSASSSSDKVVFSVWDAGGRDTLDFSGFT-QNQKINLNDASFSDVGGMVGNVSIA 344
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ VIE+ +G +G+D++IGNS N +GND+ G+ G D + + S + +
Sbjct: 345 KGAVIENAIGGAGSDLLIGNSVANELKGGAGNDILWGAGGADKLWGGSGSDTFVFAASSD 404
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ A + DF+S ++++ D + + T + D +
Sbjct: 405 S--RPGATDQILDFVSGLDKI---DLTGITKGAGLHFVSALTGAAGDAVLSTSAGNSLLS 459
Query: 384 KHFYEFGLS 392
F G++
Sbjct: 460 VDFSGHGVA 468
>gi|251789713|ref|YP_003004434.1| Serralysin [Dickeya zeae Ech1591]
gi|247538334|gb|ACT06955.1| Serralysin [Dickeya zeae Ech1591]
Length = 481
Score = 313 bits (803), Expect = 5e-83, Method: Composition-based stats.
Identities = 101/381 (26%), Positives = 167/381 (43%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 44 VNGKTSYSADQAAAQITRENVSWNGTNVFGKSANLTFKFLQSATSTPAGDKGFVKFNAEQ 103
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSR 97
+ AL W+ V +LTF E + + N Y P Y
Sbjct: 104 IAQTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYPGNYQGA 163
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 164 GSSWYNYNQSNIRSPGTEE--YGRQTLTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 221
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI------ 209
S+ S+MSY+ ++ D Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 222 SYQFSIMSYWGENETGADYKGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFHSNTDR 281
Query: 210 ---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG+D D + I+LN S+S +GG + N++IA
Sbjct: 282 DFYTANDSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 340
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GN+A+NV +GND+ G++G DT A + +++ +
Sbjct: 341 TIENAIGGSGNDLLVGNAADNVLQGGAGNDILYGAAGADTLSGGAGRDTFVYGSGQDSTV 400
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF S +++ +
Sbjct: 401 --SAYDWINDFQSGADKIDLS 419
>gi|131089|sp|P19144|PRTX_ERWCH RecName: Full=Secreted protease C; Short=ProC; Flags: Precursor
gi|148490|gb|AAA24859.1| metalloprotease C [Erwinia chrysanthemi]
Length = 478
Score = 313 bits (803), Expect = 5e-83, Method: Composition-based stats.
Identities = 101/379 (26%), Positives = 158/379 (41%), Gaps = 36/379 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N KP Y+ E D + RD W+ + K LT L + N
Sbjct: 41 INGKPSYSIEDAGDQITRDNVSWNGANVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQ 100
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS-----RYFMEINFDK 106
A+ AL W+ V ++TF E + + N + R D Y
Sbjct: 101 ISQAKLALQSWADVANVTFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSAS 160
Query: 107 ADVWRY-------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSF 158
W HEIGHALGL HPG YN G D Y D+
Sbjct: 161 GTTWYNYNVDNIRSPDTMEYGRQTLTHEIGHALGLNHPGDYNAGEGNPSYSDVTYAEDTR 220
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE------- 210
S+MSY+ +++ D Y A PM+ DI A+Q++YGA + G+++Y
Sbjct: 221 QFSIMSYWSEKNTGGDFKGHYAAGPMLDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 280
Query: 211 --VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I + +D+GG+D D + I+LN S S +GG + N++IA+ I
Sbjct: 281 YTATSSSKALIFSAWDAGGNDTFDFSGYSN-NQRINLNDGSLSDVGGLKGNVSIAEGVTI 339
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN+A+N +G+DV G SG D + + + ++ +
Sbjct: 340 ENAIGGSGNDLLIGNNADNTLRGGAGDDVLFGGSGADRLYGGSGRDTFVYTAASDSKVA- 398
Query: 329 DANEHKQDFLSDVERLRFA 347
A + DF + +++ +
Sbjct: 399 -APDWLLDFQTGADKIDLS 416
>gi|262093149|gb|ACY25898.1| alkaline metalloprotease [Flavobacterium sp. YS-80-122]
Length = 480
Score = 313 bits (802), Expect = 6e-83, Method: Composition-based stats.
Identities = 107/418 (25%), Positives = 167/418 (39%), Gaps = 43/418 (10%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP +T ++ AD L R W + P R + +
Sbjct: 41 LVNGKPSFTVDQAADQLTRSGASWYDLNGDGVINLSYTFLTSPPPGYASRGLGTFSSFSG 100
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 101 LQKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGES 160
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 161 WYLINKDYDVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPSYRDAVYGEDTRA 220
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIE---- 210
SVMSY+ +++ + Y + P++ DI AVQK+YGA G+ +Y
Sbjct: 221 YSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANMETRAGDTVYGFNSTAD 280
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I +++D GG+D LD + I+L S+S +GG N++IAQ
Sbjct: 281 RDYYSATSATDKLIFSVWDGGGNDTLDFSGFS-QNQKINLAAGSFSDVGGMTGNVSIAQG 339
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +G SGND+++GN+A+N+ +GND+ G G D + + S + +YR
Sbjct: 340 VTIENAIGGSGNDLLLGNAASNILKGGAGNDIIYGGGGADKLWGGSGSDTF-VYRE---- 394
Query: 326 IVYDANEHKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
V D+ D L D + L D + + +T D + Q
Sbjct: 395 -VSDSTPKAADTLMDFQTGLDKIDLTGITHLSGLNFVNAFTGQAGDAVVSYNQASNAG 451
>gi|23452667|gb|AAN33118.1| extracellular metalloprotease EprC [Erwinia chrysanthemi]
Length = 479
Score = 313 bits (801), Expect = 8e-83, Method: Composition-based stats.
Identities = 101/381 (26%), Positives = 167/381 (43%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 42 VNGKTSYSADQAAAQITRENVSWNGTNVFGKSANLTFKFLQSATSTPAGDKGFVKFNAEQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSR 97
+ AL W+ V +LTF E + + N Y P Y
Sbjct: 102 IAQTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYPGNYQGA 161
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 162 GSSWYNYNQSNIRSPGTEE--YGRQTLTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 219
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI------ 209
S+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 220 SYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFHSNTDR 279
Query: 210 ---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG+D D + I+LN S+S +GG + N++IA
Sbjct: 280 DFYTANDSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 338
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GN A+NV +GND+ G++G DT A + +++ +
Sbjct: 339 TIENAIGGSGNDLLVGNGADNVLQGGAGNDILYGAAGADTLSGGAGRDTFVYGSGQDSTV 398
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF S +++ +
Sbjct: 399 --SAYDWINDFQSGADKIDLS 417
>gi|164665003|gb|ABY65933.1| AprX [Pseudomonas fluorescens]
Length = 482
Score = 312 bits (800), Expect = 9e-83, Method: Composition-based stats.
Identities = 104/434 (23%), Positives = 169/434 (38%), Gaps = 48/434 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 37 VNGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFS 95
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 96 NLQKGQAVLAMQSWADVANVTFTERASGGDFHMTFGNYSSGQDGAAAFAYLPGTNEKYHT 155
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ + G HEIGH LGL HPG YN G D D
Sbjct: 156 SGTDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYRDAD 215
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 216 YGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 275
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ +++D GG+D LD + I+LN S+S +GG
Sbjct: 276 GFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNETSFSDVGGLVG 334
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N++IAQ +E+ G SGND++IGN+ N +GND+ G G D + A S +
Sbjct: 335 NVSIAQGVTVENAFGGSGNDLLIGNAVANTLKGGAGNDLIYGGGGADKLWGGAGSDTFVF 394
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ A + DF S +++ S + A L G +
Sbjct: 395 GASSDS--RPGAADQILDFTSGSDKIDLTGITKGSGLH-FVNAFTGAAGDAVLTYASGTN 451
Query: 379 VFESMKHFYEFGLS 392
+ F G++
Sbjct: 452 LGTLAVDFAGHGVA 465
>gi|28948368|pdb|1H71|P Chain P, Psychrophilic Protease From Pseudoalteromonas 'tac Ii 18'
Length = 463
Score = 312 bits (800), Expect = 9e-83, Method: Composition-based stats.
Identities = 99/382 (25%), Positives = 158/382 (41%), Gaps = 38/382 (9%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP +T +++AD L R W + P V R ++ +
Sbjct: 24 LVNGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLGTFSQFSA 83
Query: 50 NAQEVARWALGEWSKVVDLTFEETS---------IHSDIKFISSNNGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E ++ + + P +
Sbjct: 84 LQKEQAKLSLESWADVAKVTFTEGPAARGDDGHQTFANFSASNGGAAFAYLPNSSRKGES 143
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 144 WYLINKDYQVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYAEDTRA 203
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ +++ + Y + P++ DI AVQK+YGA + + +Y
Sbjct: 204 YSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGFNSTAD 263
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I +++D GG+D LD + I+L S+S +GG N++IAQ
Sbjct: 264 RDFYSATSSTDKLIFSVWDGGGNDTLDFSGFS-QNQKINLTAGSFSDVGGMTGNVSIAQG 322
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +G SGND++IGN A NV +GND+ G G D + S + ++
Sbjct: 323 VTIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGADVLWGGTGSDTFVFGAVSDS- 381
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF S +++
Sbjct: 382 -TPKAADIIKDFQSGFDKIDLT 402
>gi|300724813|ref|YP_003714138.1| Secreted alkaline metalloproteinase [Xenorhabdus nematophila ATCC
19061]
gi|297631355|emb|CBJ92050.1| Secreted alkaline metalloproteinase [Xenorhabdus nematophila ATCC
19061]
gi|310894056|gb|ADP37931.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894060|gb|ADP37933.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894062|gb|ADP37934.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894064|gb|ADP37935.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894066|gb|ADP37936.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894068|gb|ADP37937.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894070|gb|ADP37938.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894072|gb|ADP37939.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894074|gb|ADP37940.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894076|gb|ADP37941.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
Length = 478
Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats.
Identities = 94/373 (25%), Positives = 168/373 (45%), Gaps = 38/373 (10%)
Query: 11 ERIADHLLRDQY-WSN-------------YFIRYKPDVLTTHRLSFDITELNPNAQEVAR 56
+ D L+R Y W+N +F++ D L + N ++ A+
Sbjct: 45 DEAPDELVRGHYKWANKYVNSSGTLELSYHFLKSASDPLMRIFKVSGFSAFNEEQKDAAK 104
Query: 57 WALGEWSKVVDLTFEETSI--HSDIKFI------SSNNGYVCTPRYDSRYFMEINFDKAD 108
+L WS V ++ F E S ++I F + + + P+ + N
Sbjct: 105 LSLQSWSDVANIKFTEVSSIYKANITFGFFDKSVNKDYAFANLPQGQKMVYTWYNAKSHT 164
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSY 165
I + HEIGH LGL HP Y+ P Y +Y D +VMSY
Sbjct: 165 FVDNDIDVNGYIRQTFTHEIGHTLGLEHPADYDASDEIRPNYINSAEYFEDCRAYTVMSY 224
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE---------VQQKD 215
F + + D +GY + P+++DI A+Q++YGA + G+ +Y +
Sbjct: 225 FSEKFTGQDFKYGYSSAPLLNDISAIQELYGANMETRKGDTVYGFNSNTDRDFMTATDAN 284
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S I +++D+GG+D D + I+LN S+S +GG + N++IA+ VIE+ +G S
Sbjct: 285 SKLIFSVWDAGGEDTFDFSGFT-QNQRINLNAGSFSDVGGLKGNVSIARGVVIENAIGGS 343
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D+++GNSA+N+ +G+D+ G G D + + ++ + + +
Sbjct: 344 GDDILVGNSADNILKGGAGDDIIYGGLGGDHLWGGEGNDIF--VYLSGKESLKNNPDWIH 401
Query: 336 DFLSDVERLRFAD 348
DF+S +++ +D
Sbjct: 402 DFVSGEDKIDLSD 414
>gi|238791577|ref|ZP_04635215.1| Serralysin [Yersinia intermedia ATCC 29909]
gi|238729193|gb|EEQ20709.1| Serralysin [Yersinia intermedia ATCC 29909]
Length = 479
Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats.
Identities = 100/377 (26%), Positives = 157/377 (41%), Gaps = 43/377 (11%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSF---------DITELNPN 50
+ N KP Y+ E + R DQ W+ ++ +P LT L + NP
Sbjct: 38 VINGKPSYSNEDAGLQITRTDQTWNGKYVFDQPVKLTYSFLDSVTRIPGGDKGFVKFNPA 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------NGYVCTPRYDSRY 98
A+ +L WS ++TF E + N Y P S
Sbjct: 98 QIATAKLSLQSWSDAANITFTEITPSQKANVTFGNFTLSHDGSLADSQAYALLPGSGSSS 157
Query: 99 FM-EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++ ++ + HEIGHALGL HPG+YN G D Y D
Sbjct: 158 GSTWYNYNVDNIRHPDTME--YGRQTLTHEIGHALGLSHPGNYNAGEGTPTYKDVTYAED 215
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI------ 209
+ S+MSY+ +++ D Y A PM+ DI A+Q +YGA + G+ IY
Sbjct: 216 TRQFSIMSYWNEKNTGGDNKGHYAAAPMLDDIAAIQHLYGANMTTRTGDTIYGFHSNTHR 275
Query: 210 ---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+ G+D D + I+L+ S++ +GG + N++IA
Sbjct: 276 DYYTAADSSKALIFSVWDADGNDTFDFSGYSN-DQRINLHEGSFTDVGGLKGNVSIAAGV 334
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GN A N GND+ G G D + ++ +
Sbjct: 335 TIENAIGGSGNDIIVGNDARNTLMGGDGNDILFGDGGADVLWGGGGKDIFVFGK------ 388
Query: 327 VYDANEHKQDFLSDVER 343
V D+ D++ D ER
Sbjct: 389 VSDSTPQVADWIMDFER 405
>gi|312960983|ref|ZP_07775488.1| serralysin [Pseudomonas fluorescens WH6]
gi|311284641|gb|EFQ63217.1| serralysin [Pseudomonas fluorescens WH6]
Length = 477
Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats.
Identities = 104/428 (24%), Positives = 171/428 (39%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 37 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSATLNKHGISGFSQFNA 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++ F E + D N + P + Y
Sbjct: 97 QQKAQAVLAMQSWADVANVAFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ- 212
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 217 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 276
Query: 213 --------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+LN S+S +GG N++IA+
Sbjct: 277 GRDFLSAGSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNETSFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E+ G +GND++IGN+A NV +GND+ G G D + A S + ++
Sbjct: 336 GVTVENAFGGAGNDLIIGNNAANVIKGGAGNDLIYGGGGADQLWGGAGSDTFVFGASSDS 395
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + DF S +++ + + + + A L G ++
Sbjct: 396 --RPGAADKLLDFTSGSDKIDLSGITKGA-GLSFVNAFTGHAGDAVLSYAAGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|307131039|ref|YP_003883055.1| secreted protease B [Dickeya dadantii 3937]
gi|306528568|gb|ADM98498.1| Secreted protease B precursor [Dickeya dadantii 3937]
Length = 481
Score = 312 bits (798), Expect = 2e-82, Method: Composition-based stats.
Identities = 102/381 (26%), Positives = 171/381 (44%), Gaps = 38/381 (9%)
Query: 2 HNIKPVYTTERIADH-LLRDQY-WSNYFIRYKPDVLTTHRLSFDIT---------ELNPN 50
N KP YTT++ L R W+ + K LT L+ + + P
Sbjct: 42 VNGKPSYTTDKAVSEGLTRPHTTWNGDNVFGKAANLTYSFLNTFSSTPNGHTGPVKFTPV 101
Query: 51 AQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF---MEINFD 105
+ A+ +L W+ +LTF E S + ++I F + + D++ + +
Sbjct: 102 QMQQAKLSLQSWADAANLTFTEVSPNQKANITFANYTRNADGSLNTDTQAYAAYPGTHPV 161
Query: 106 KADVWRY-------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYP--VYGVDNDYEND 156
W H+ HEIGHALGL HP YN G Y Y D
Sbjct: 162 SGSAWFNYNQSSIRNPDTDEYGRHSFTHEIGHALGLSHPAEYNAGEGDISYKNSAAYAED 221
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+ +Y
Sbjct: 222 SRQFSIMSYWEVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFNSNTDR 281
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++D+GG+D D + I+LN S+S +GG + N++IA
Sbjct: 282 DFYTATNSSKALVFSVWDAGGNDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 340
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND++IGN A+N+ +G+DV GS+G DT A ++ +++ +
Sbjct: 341 TIENAIGGSGNDILIGNGADNILQGGAGDDVLYGSTGADTLTGGAGRDIFVYGSGQDSTV 400
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF + ++++ +
Sbjct: 401 --SAYDWITDFQTGIDKIDLS 419
>gi|255311883|pdb|3HB2|P Chain P, Prtc Methionine Mutants: M226i
Length = 462
Score = 312 bits (798), Expect = 2e-82, Method: Composition-based stats.
Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 40/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ ++ A + R+ W+ + K LT L + N
Sbjct: 25 VNGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQ 84
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----------SNNGYVCTP-RYDSR 97
E A+ +L WS V +LTF E + + ++I F + Y P Y
Sbjct: 85 IEQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYPGNYQGA 144
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + H IGHALGL HPG YN G D Y D
Sbjct: 145 GSSWYNYNQSNIRNPGSEE--YGRQTFTHAIGHALGLAHPGEYNAGEGDPSYNDAVYAED 202
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S+ S++SY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 203 SYQFSIISYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDR 262
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 263 DFYTATDSSKALIFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 321
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT + A + +++ +
Sbjct: 322 TIENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLYGGAGRDTFVYGSGQDSTV 381
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF ++++ +
Sbjct: 382 A--AYDWIADFQKGIDKIDLS 400
>gi|47591|emb|CAA27738.1| unnamed protein product [Serratia sp.]
Length = 486
Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats.
Identities = 93/407 (22%), Positives = 173/407 (42%), Gaps = 43/407 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNP 49
N K ++ E+ + R+ W+ Y + +P LT + +++ +
Sbjct: 40 INGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSA 99
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF------ME 101
Q+ A+ +L W+ V ++TF E + ++I F + + Y ++ + +
Sbjct: 100 EQQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIW 159
Query: 102 INFDKADVWRYGIGKGT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
D Y + + HEIGHALGL HPG YN G D
Sbjct: 160 QGQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVT 219
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE- 210
Y D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 220 YAEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNS 279
Query: 211 --------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I +D+GG+D D + I+LN +S+S +GG + N++I
Sbjct: 280 NTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYT-ANQRINLNEKSFSDVGGLKGNVSI 338
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G +++GN+ANNV +GNDV G G D + A ++
Sbjct: 339 AAGVTIENAIGFR-QRLIVGNAANNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAAS 397
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ A++ +DF ++++ + ++ + +++ +
Sbjct: 398 DSA--PGASDWIRDFQKGIDKIDLSFFNKEAQSSDFIHFVDHFSGAA 442
>gi|131060|sp|P16316|PRTB_ERWCH RecName: Full=Secreted protease B; Short=ProB; Flags: Precursor
gi|148487|gb|AAA63637.1| neutral protease large subunit [Erwinia chrysanthemi]
gi|148494|gb|AAA24861.1| protease B precursor [Erwinia chrysanthemi]
Length = 481
Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats.
Identities = 102/381 (26%), Positives = 170/381 (44%), Gaps = 38/381 (9%)
Query: 2 HNIKPVYTTERIADH-LLRDQY-WSNYFIRYKPDVLTTHRLSFDIT---------ELNPN 50
N KP YTT++ L R W+ + K LT L+ + + P
Sbjct: 42 VNGKPSYTTDKAVSEGLTRPHTTWNGDNVFGKAANLTYSFLNTFSSTPNGHTGPVKFTPV 101
Query: 51 AQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYF---MEINFD 105
+ A+ +L W+ +LTF E S + ++I F + + D++ + +
Sbjct: 102 QMQQAKLSLQSWADAANLTFTEVSPNQKANITFANYTRNADGSLNTDTQAYAAYPGTHPV 161
Query: 106 KADVWRY-------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYP--VYGVDNDYEND 156
W H+ HEIGHALGL HP YN G Y Y D
Sbjct: 162 SGSAWFNYNQSSIRNPDTDEYGRHSFTHEIGHALGLSHPAEYNAGEGDISYKNSAAYAED 221
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE----- 210
S S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+ +Y
Sbjct: 222 SRQFSIMSYWEVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFNSNTDR 281
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++D+GG D D + I+LN S+S +GG + N++IA
Sbjct: 282 DFYTATNSSKALVFSVWDAGGTDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 340
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND++IGN A+N+ +G+DV GS+G DT A ++ +++ +
Sbjct: 341 TIENAIGGSGNDILIGNGADNILQGGAGDDVLYGSTGADTLTGGAGRDIFVYGSGQDSTV 400
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF + ++++ +
Sbjct: 401 --SAYDWITDFQTGIDKIDLS 419
>gi|238755251|ref|ZP_04616595.1| Serralysin [Yersinia ruckeri ATCC 29473]
gi|14161134|emb|CAC39217.1| metalloprotease p1 [Yersinia ruckeri]
gi|238706485|gb|EEP98858.1| Serralysin [Yersinia ruckeri ATCC 29473]
Length = 477
Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats.
Identities = 98/381 (25%), Positives = 161/381 (42%), Gaps = 39/381 (10%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSF---------DITELNPN 50
+ KP YT E + R +Q W+ + +P LT L + NP
Sbjct: 38 IIQGKPSYTPEEAGLQITRTNQTWNGKNVFDQPVKLTYSFLDQVSRIPSGDKGFVKFNPA 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------NGYVCTPRYDS-R 97
EVA+ +L W+ ++ F E + N Y P S
Sbjct: 98 QIEVAKLSLQSWADAANIAFTEITSSQSANITFGNYTLSWNGKPADSQAYAYLPGSGSPS 157
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++ ++ + + HEIGHALGL HPG+YN G D Y D
Sbjct: 158 GSTWYNYNVDNIRNPDVME--YGRQTFTHEIGHALGLSHPGNYNAGQGDPSYKDVTYAED 215
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ--- 212
+ S+MSY+ +++ D Y + P++ DI A+Q +YGA + G+ IY
Sbjct: 216 TRQFSIMSYWSEKNTGGDNKGHYASAPLLDDISAIQHLYGANMTTRTGDTIYGFNSNTER 275
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+ G+D D + I+L +S+S +GG + N++IA
Sbjct: 276 DYYTAINSSKALIFSVWDADGNDTFDFSGYSN-NQRINLYEQSFSDVGGLKGNVSIAAGV 334
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGNDV++GN N ++GNDV G G D + + S ++ E
Sbjct: 335 TIENAIGGSGNDVLVGNDIANELHGAAGNDVLFGCGGADKLWGGSGSDIF--VYGEAMDS 392
Query: 327 VYDANEHKQDFLSDVERLRFA 347
+ + DF S ++++ +
Sbjct: 393 TPASPDWIMDFESGIDKIDLS 413
>gi|60265600|gb|AAX15945.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894058|gb|ADP37932.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
Length = 478
Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats.
Identities = 94/373 (25%), Positives = 167/373 (44%), Gaps = 38/373 (10%)
Query: 11 ERIADHLLRDQY-WSN-------------YFIRYKPDVLTTHRLSFDITELNPNAQEVAR 56
+ D L+R Y W+N +F++ D L + N ++ A+
Sbjct: 45 DEAPDELVRGHYKWANKYVNSSGTLELSYHFLKSASDPLMRIFKVSGFSAFNEEQKDAAK 104
Query: 57 WALGEWSKVVDLTFEETSI--HSDIKFI------SSNNGYVCTPRYDSRYFMEINFDKAD 108
+L WS V ++ F E S ++I F + + + P+ + N
Sbjct: 105 LSLQSWSDVANIKFTEVSSIYKANITFGFFDKSVNKDYAFANLPQGQKMVYTWYNAKSHT 164
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSY 165
I + HEIGH LGL HP Y+ P Y +Y D +VMSY
Sbjct: 165 FVDNDIDVNGYIRQTFTHEIGHTLGLEHPADYDASDEIRPNYINSAEYFEDCRAYTVMSY 224
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE---------VQQKD 215
F + + D +GY + P+++DI A+Q++YGA + G+ +Y +
Sbjct: 225 FSEKFTGQDFKYGYSSAPLLNDISAIQELYGANMETRKGDTVYGFNSNTDRDFMTATDAN 284
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S I +++D+GG+D D + I+LN S+S +GG + N++IA+ VIE+ +G S
Sbjct: 285 SKLIFSVWDAGGEDTFDFSGFT-QNQRINLNAGSFSDVGGLKGNVSIARGVVIENAIGGS 343
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D+++GNSA+N+ G+D+ G G D + + ++ + + +
Sbjct: 344 GDDILVGNSADNILKGGVGDDIIYGGLGGDHLWGGEGNDIF--VYLSGKESLKNNPDWIH 401
Query: 336 DFLSDVERLRFAD 348
DF+S +++ +D
Sbjct: 402 DFVSGEDKIDLSD 414
>gi|271500593|ref|YP_003333618.1| Serralysin [Dickeya dadantii Ech586]
gi|270344148|gb|ACZ76913.1| Serralysin [Dickeya dadantii Ech586]
Length = 480
Score = 311 bits (796), Expect = 3e-82, Method: Composition-based stats.
Identities = 103/381 (27%), Positives = 164/381 (43%), Gaps = 38/381 (9%)
Query: 2 HNIKPVYTTERIADH-LLRDQY-WSNYFIRYKPDVLTTHRLSFDIT---------ELNPN 50
N KP Y+T++ L R W+ + K LT L + + P
Sbjct: 41 VNGKPSYSTDKAVSEGLTRPHTTWNGDNVYGKAANLTYSFLDTFTSTPNGHTGPVKFTPV 100
Query: 51 AQEVARWALGEWSKVVDLTFEETS--IHSDIKFISSNNGYVCTPRYDSRYF---MEINFD 105
+ + +L W+ V +LTF E S ++I F + + D++ + +
Sbjct: 101 QMDQVKLSLQSWADVANLTFTEVSPSQKANITFANYTRNADGSLNTDTQAYAAYPGTHPL 160
Query: 106 KADVWRY-------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYP--VYGVDNDYEND 156
W H HEIGHALGL HP YN G Y Y D
Sbjct: 161 SGSAWFNYNQSTVRNPDTEEYGRHTFTHEIGHALGLSHPAEYNAGEGDISYKNSAAYAED 220
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI------ 209
S S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+ +Y
Sbjct: 221 SRQFSIMSYWDVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFHSNTDR 280
Query: 210 ---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++D+GG+D D + I+LN ++S +GG + N++IA
Sbjct: 281 DFYTATDSSKALVFSVWDAGGNDTFDFSGYS-DNQRINLNEGAFSDVGGLKGNVSIAHGV 339
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+NV +GNDV GS G DT A ++
Sbjct: 340 TIENAIGGSGNDILVGNSADNVLQGGAGNDVLFGSVGADTLTGGAGRDIF--VYGSGQDS 397
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF + V+++ +
Sbjct: 398 TLSAYDWITDFQTGVDKIDLS 418
>gi|62754165|gb|AAX99100.1| secreted alkaline metalloprotease [Photorhabdus temperata subsp.
khanii NC19]
Length = 483
Score = 311 bits (796), Expect = 3e-82, Method: Composition-based stats.
Identities = 91/368 (24%), Positives = 152/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W + F+ +PD + H + N + A+ +
Sbjct: 50 AAKELIRGDYRWGHQGDDKSETFQLTYSFLESEPDNMPWHI--AGFSAFNEEQKAAAKLS 107
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ Y Y ++ W
Sbjct: 108 IQSWTDVANINFTETTDSDKAHITFGFFDVSLRGSYAFAYLPSPESKQSGTWYNLKSHTF 167
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
IG HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 168 SENDIGVNGYGRQTFTHEIGHTLGLEHPADYNASDKERPTYKKSATYFEDSRAYTVMSYF 227
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q++YGA + + +Y ++S
Sbjct: 228 GEKNTGQDFKGIYSSAPLLNDISAIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDENS 287
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 288 KLLFTAWDAGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 346
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND++IGN A N+ +G+D+ G G D + + + + + D
Sbjct: 347 NDILIGNDAENILKGGAGDDIIYGGLGADQLWGGEGKDTFVYLSAKESPPPE--RDWIHD 404
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 405 FVSGEDKI 412
>gi|28395571|gb|AAO39136.1| secreted alkaline metalloproteinase [Photorhabdus luminescens]
Length = 483
Score = 310 bits (795), Expect = 4e-82, Method: Composition-based stats.
Identities = 92/368 (25%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W + F+ +PD + H + N + A+ +
Sbjct: 50 AAKELIRGDYRWGHQGDDKSETFQLTYSFLESEPDNMPWHI--AGFSAFNEEQRTAAKLS 107
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ T Y Y ++ W
Sbjct: 108 IQSWTDVANINFTETTDSDKAHITFGFFDASLTGSYAFAYLPSPESKQSGTWYNLKSRTF 167
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
IG HEIGH LGL HP +YN P Y Y DS +VMSYF
Sbjct: 168 SENDIGVNGYGRQTFTHEIGHTLGLEHPAAYNASDKERPTYKKSATYFEDSRAYTVMSYF 227
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q++YGA + + +Y ++S
Sbjct: 228 GEKNTGQDFKGIYSSAPLLNDISAIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDENS 287
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 288 KLLFTAWDAGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 346
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND++IGN A+N +G+D+ G G D + + + + + + D
Sbjct: 347 NDILIGNDADNTLKGGAGDDIIYGGLGADQLWGGEGKDTFVYLSAKESPPLE--RDWIHD 404
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 405 FVSGEDKI 412
>gi|292490040|ref|YP_003532934.1| zinc-binding metalloprotease PrtA [Erwinia amylovora CFBP1430]
gi|292901057|ref|YP_003540426.1| zinc-binding metalloprotease [Erwinia amylovora ATCC 49946]
gi|4826415|emb|CAB42873.1| zinc-binding metalloprotease [Erwinia amylovora]
gi|291200905|emb|CBJ48042.1| zinc-binding metalloprotease [Erwinia amylovora ATCC 49946]
gi|291555481|emb|CBA23978.1| zinc-binding metalloprotease PrtA [Erwinia amylovora CFBP1430]
Length = 478
Score = 309 bits (792), Expect = 9e-82, Method: Composition-based stats.
Identities = 104/386 (26%), Positives = 171/386 (44%), Gaps = 43/386 (11%)
Query: 2 HNIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFD-----------ITELNP 49
N K Y ++ + R +Q W+ + K +T S++ + NP
Sbjct: 30 VNNKTSYDIDQAGKEIARGEQSWNGVHVTDKGATVTYSFPSWEPGKKNFNGDTIHSAFNP 89
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--HSDIKFIS----SNNGYVCTPR--------YD 95
Q + +L WS V ++ F E S +S+I F + Y P+ YD
Sbjct: 90 EQQAQTKLSLQSWSDVANIKFVEVSGDQYSNITFGNIVAPDTQAYAMLPQSTDNGKIIYD 149
Query: 96 SRYF---MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDN 151
R F + + +D G HEIGH LGL HPG YN G D
Sbjct: 150 DRSFDISGQSWYSTSDPENLAPELGNYGRLTLTHEIGHTLGLNHPGDYNAGEGNPSYADA 209
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI- 209
Y DS S MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 210 TYAEDSRQFSDMSYWNEPNTGGDNGGNYSAAPLIDDIAAIQHLYGANMTTRTGDTVYGFH 269
Query: 210 --------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I ++D+GG+D LD + I+LN S+S +GG + N++
Sbjct: 270 SNTDRDFYTAKDSNQKLIFAVWDAGGNDTLDFSGYS-QNQRINLNEGSFSDVGGLKGNIS 328
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA IE+ +G +GNDV++GN+A+NV +GNDV G G D + + + ++
Sbjct: 329 IAAGATIENAIGGAGNDVIVGNAADNVIKGGAGNDVIYGGGGQDQLWGGSGNDIFVFSDL 388
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFA 347
+++ + + +DF S +++ +
Sbjct: 389 KDSS--SKSPDQIRDFESGKDKIDLS 412
>gi|251826356|gb|ACT21086.1| extracellular metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 309 bits (791), Expect = 1e-81, Method: Composition-based stats.
Identities = 103/428 (24%), Positives = 166/428 (38%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 37 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 97 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 217 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+L S+S +GG N++IA+
Sbjct: 277 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLTATSFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ G +GND++IGN N +GND+ G G D + A S ++
Sbjct: 336 GVTIENAFGGAGNDLIIGNQVANTIKGGAGNDLIYGGGGADQLWGGAGSD--TFVYGASS 393
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + DF S +++ + + V + A L G ++
Sbjct: 394 DSKPGAADKIFDFTSGSDKIDLSGITKGA-GVTFVNAFTGHAGDAVLSYASGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|73533607|gb|AAZ76880.1| protease [Pseudomonas fluorescens]
Length = 477
Score = 309 bits (791), Expect = 1e-81, Method: Composition-based stats.
Identities = 103/428 (24%), Positives = 166/428 (38%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 37 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 97 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 217 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+L S+S +GG N++IA+
Sbjct: 277 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLTATSFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ G SGND++IGN N +GND+ G G D + S ++
Sbjct: 336 GVTIENAFGGSGNDLIIGNQVANTIKGGAGNDLIYGGGGADQLWGGTGSD--TFVYGASS 393
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + DF S +++ + + V + A L G ++
Sbjct: 394 DSRPGAADKIFDFTSGSDKIDLSGITKGA-GVTFVNAFTGHAGDAVLTYASGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|31335337|gb|AAP44489.1| extracellular alkaline metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats.
Identities = 103/428 (24%), Positives = 166/428 (38%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 37 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 97 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIEVQ- 212
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 217 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNT 276
Query: 213 --------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+L S+S +GG N++IA+
Sbjct: 277 GRDFLSASSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLTATSFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ G SGND++IGN N +GND+ G G D + S ++
Sbjct: 336 GVTIENAFGGSGNDLIIGNQVANTIKGGAGNDLIYGGGGADQLWGGTGSD--TFVYGASS 393
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + DF S +++ + + V + A L G ++
Sbjct: 394 DSRPGAADKIFDFTSGSDKIDLSGITKGA-GVTFVNAFTGHAGDAVLTYASGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|54038903|sp|Q84F70|PRTA1_PHOLU RecName: Full=Secreted alkaline metalloproteinase
gi|28395574|gb|AAO39138.1| secreted alkaline metalloproteinase [Photorhabdus luminescens]
Length = 486
Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 149/368 (40%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 53 AAKELIRGDYRWGHQDDDKSKAFQLKYTFLESKPDDMPWHI--SEFSAFNEKQKAAAKLS 110
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFM---------EINFDKADV 109
+ W+ V ++ F ET+ + T Y Y N
Sbjct: 111 IQSWADVANINFVETTDAKEANITFGFFDVSLTGSYAFAYLPRPEKTQLGTWYNAKSRTF 170
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 171 SNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDEVSPTYKNSATYFEDSRAYTVMSYF 230
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 231 SEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENS 290
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 291 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 349
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + D
Sbjct: 350 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGKDTFVYLSAKESPPLE--RDWIHD 407
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 408 FVSGEDKI 415
>gi|312174231|emb|CBX82484.1| zinc-binding metalloprotease PrtA [Erwinia amylovora ATCC BAA-2158]
Length = 478
Score = 308 bits (789), Expect = 2e-81, Method: Composition-based stats.
Identities = 103/406 (25%), Positives = 175/406 (43%), Gaps = 43/406 (10%)
Query: 2 HNIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFD-----------ITELNP 49
N K Y ++ + R +Q W+ + K +T S++ + NP
Sbjct: 30 VNNKTSYDIDQAGKEIARGEQSWNGVHVTDKGATVTYSFPSWEPGKKNFNGDTIHSAFNP 89
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--HSDIKFIS----SNNGYVCTPR--------YD 95
Q + +L WS V ++ F E S +S+I F + Y P+ YD
Sbjct: 90 EQQAQTKLSLQSWSDVANIKFVEVSGDQYSNITFGNIVAPDTQAYAMLPQSTDNGKIIYD 149
Query: 96 SRYF---MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDN 151
R + + + +D G HEIGH LGL HPG YN G D
Sbjct: 150 DRSYDISGQSWYSTSDPENLAPELGNYGRLTLTHEIGHTLGLNHPGDYNAGEGNPSYADA 209
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI- 209
Y DS S MSY+ ++ D Y A P++ DI A+Q +YGA + G+ +Y
Sbjct: 210 TYAEDSRQFSDMSYWNEPNTGGDNGGNYSAAPLIDDIAAIQHLYGANMTTRTGDTVYGFH 269
Query: 210 --------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I ++D+GG+D LD + I+LN S+S +GG + N++
Sbjct: 270 SNTDRDFYTAKDSNQKLIFAVWDAGGNDTLDFSGYS-QNQRINLNEGSFSDVGGLKGNIS 328
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA IE+ +G +GNDV++GN+A+NV +GNDV G G D + + + ++
Sbjct: 329 IAAGATIENAIGGAGNDVIVGNAADNVIKGGAGNDVIYGGGGQDQLWGGSGNDIFVFSDL 388
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+++ + + +DF S +++ + +++ +
Sbjct: 389 KDSS--SKSPDQIRDFESGKDKIDLSFFNQGDKGSDFIHFVDHFSG 432
>gi|302184989|ref|ZP_07261662.1| serralysin [Pseudomonas syringae pv. syringae 642]
Length = 476
Score = 308 bits (789), Expect = 2e-81, Method: Composition-based stats.
Identities = 100/375 (26%), Positives = 157/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD+LLRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAADYLLRDDASWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-------- 103
+ A ++ W+ V ++F + + D N Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSW 157
Query: 104 --FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
D + G HEIGH LGL HPG YN G D Y D+
Sbjct: 158 YLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANMSTRAGDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA+
Sbjct: 278 DFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ VG SGND++IGN+A N +GND+ G G+D+ A + ++
Sbjct: 337 VVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGVDSLTGGAGADIFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAGQDTIRDF 405
>gi|3646411|emb|CAA07697.1| metalloprotease [Pseudomonas tolaasii]
Length = 477
Score = 308 bits (789), Expect = 2e-81, Method: Composition-based stats.
Identities = 103/428 (24%), Positives = 171/428 (39%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP +T ++ ADHLLRD + K D+ T S ++ N
Sbjct: 37 VNGKPSWTVDQAADHLLRDGASYKELNHNGKIDLTYTFLTSATTATMNKHGISGFSQFNA 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG----------YVCTPRYDSRYF 99
+ A A+ W+ V +++F E++ D +N Y+
Sbjct: 97 QQKAQAVLAMQSWADVANVSFTESASGGDTHMTFANYSGGQAGAAAFAYLPGTGAGYDGT 156
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + HEIGH LGL HPG YN G D DY D+
Sbjct: 157 SWYLTNSSYTVNKTPDVNNYGRQTLTHEIGHTLGLAHPGDYNAGTGNPTYKDADYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE--- 210
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+ Y
Sbjct: 217 GYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+L S+ +GG N++I +
Sbjct: 277 GRDFYSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLTEGSFFDVGGLVGNVSIGK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E+ G SGND++IGN+A N+ +GND+ G G D + A + + + N+
Sbjct: 336 GVTVENAFGGSGNDLIIGNNAVNIIKGGAGNDIIYGGGGADQLWGGAGNDTFVLGASSNS 395
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + DF S +++ + + + + A L G ++
Sbjct: 396 G--PGAPDKIFDFTSGSDKIDLSGITKGA-GLTFVNAFTGHAGDAVLSYAAGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|54038901|sp|P82115|PRTA_PHOAZ RecName: Full=Protease prtA; AltName: Full=Secreted alkaline
metalloproteinase
gi|42541022|gb|AAS19409.1| secreted alkaline metalloprotease [Photorhabdus sp. Az29]
Length = 483
Score = 308 bits (789), Expect = 2e-81, Method: Composition-based stats.
Identities = 92/368 (25%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W + F+ +PD + H + N + A+ +
Sbjct: 50 AAKELIRGDYRWGHQGDDKSETFQLTYSFLESEPDNMPWHIT--GFSAFNEEQRTAAKLS 107
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ T Y Y ++ W
Sbjct: 108 IQSWTDVANINFTETTDSDKAHITFGFFDASLTGSYAFAYLPSPESKQSGTWYNLKSRTF 167
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
IG HEIGH LGL HP +YN P Y Y DS +VMSYF
Sbjct: 168 SENDIGVNGYGRQTFTHEIGHTLGLEHPAAYNASDKERPTYKKSATYFEDSRAYTVMSYF 227
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q++YGA + + +Y ++S
Sbjct: 228 GEKNTRTDFKGIYSSAPLLNDISAIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDENS 287
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 288 KLLFTAWDAGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 346
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND++IGN A N+ +G+D+ G G D + + + + + + D
Sbjct: 347 NDILIGNDAENILKGGAGDDIIYGGLGADQLWGGEGKDTFVYLSAKESPPLE--RDWIHD 404
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 405 FVSGEDKI 412
>gi|331010762|gb|EGH90818.1| serralysin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 476
Score = 308 bits (788), Expect = 3e-81, Method: Composition-based stats.
Identities = 99/375 (26%), Positives = 156/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD++LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAADYILRDNAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-------- 103
+ A ++ W+ V ++F + + D N Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSW 157
Query: 104 --FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
D + G HEIGH LGL HPG YN G D Y D+
Sbjct: 158 YLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTYKDASYAEDTRGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGVAAYSSAPLLDDIAAVQQLYGANMSTRAGDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA+
Sbjct: 278 DFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ VG SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 337 VVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAAQDTIRDF 405
>gi|251789712|ref|YP_003004433.1| Serralysin [Dickeya zeae Ech1591]
gi|247538333|gb|ACT06954.1| Serralysin [Dickeya zeae Ech1591]
Length = 480
Score = 308 bits (788), Expect = 3e-81, Method: Composition-based stats.
Identities = 104/383 (27%), Positives = 173/383 (45%), Gaps = 42/383 (10%)
Query: 2 HNIKPVYTTERIADH-LLRDQY-WSNYFIRYKPDVLTTHRLSFDIT---------ELNPN 50
N KP Y+T++ + L R W+ + K LT L+ + + P
Sbjct: 41 VNGKPSYSTDKAVEEGLTRPHTTWNGDNVYGKAANLTYSFLNTFSSTPNGHTGPVKFTPV 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYFM-------- 100
+ + +L WS V +LTF E S + +++ F + + D++ +
Sbjct: 101 QMQQVKLSLQSWSDVANLTFTEVSPNQKANLTFANYTRNADGSIENDTQAYAAYPGQHPL 160
Query: 101 ----EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP--VYGVDNDYE 154
N+++ + + H HEIGH LGL HP YN G Y Y
Sbjct: 161 SGSAWFNYNQPSIRNPDTDE--YGRHTFTHEIGHTLGLSHPAEYNAGEGDISYKNSAAYA 218
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI---- 209
DS S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+++Y
Sbjct: 219 EDSRQFSIMSYWDVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDSVYGFHSNT 278
Query: 210 -----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
I +++D+GG+D D + I+LN S S +GG + N++IA
Sbjct: 279 DRDFYTANNSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGSLSDVGGLKGNVSIAH 337
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ +G SGND+++GN ANNV +G+DV GS+G DT A ++ +++
Sbjct: 338 GVTIENAIGGSGNDLLVGNGANNVLQGGAGDDVLYGSTGADTLVGGAGRDIFVYGSGQDS 397
Query: 325 IIVYDANEHKQDFLSDVERLRFA 347
A + DF S V+++ +
Sbjct: 398 TT--SAYDWINDFQSGVDKIDLS 418
>gi|62754189|gb|AAX99112.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 151/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|62754167|gb|AAX99101.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
gi|62754173|gb|AAX99104.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
gi|62754187|gb|AAX99111.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 151/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|62754183|gb|AAX99109.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 307 bits (785), Expect = 5e-81, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 153/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA K ++ +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANKTIRADDPVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|330954598|gb|EGH54858.1| serralysin [Pseudomonas syringae Cit 7]
Length = 476
Score = 307 bits (785), Expect = 5e-81, Method: Composition-based stats.
Identities = 100/375 (26%), Positives = 156/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD++LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAADYILRDNAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-------- 103
+ A ++ W+ V ++F + + D N Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSW 157
Query: 104 --FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
D + G HEIGH LGL HPG YN G D Y D+
Sbjct: 158 YLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S IGG N++IA+
Sbjct: 278 DFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDIGGMVGNVSIAKGV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ VG SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 337 VVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAGQDTIRDF 405
>gi|62754177|gb|AAX99106.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 307 bits (785), Expect = 5e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 150/368 (40%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSARESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|62754169|gb|AAX99102.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 307 bits (785), Expect = 5e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 151/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGAKNTIRADDTVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|37524656|ref|NP_928000.1| alkaline metalloprotease precursor PrtA [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|54038902|sp|Q7N8R3|PRTA_PHOLL RecName: Full=Secreted alkaline metalloproteinase
gi|36784081|emb|CAE12950.1| Alkaline metalloprotease precursor PrtA [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 480
Score = 307 bits (785), Expect = 6e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 151/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 47 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 104
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 105 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 164
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 165 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 224
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 225 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENS 284
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 285 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 343
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 344 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 401
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 402 FVSGKDKI 409
>gi|270261821|ref|ZP_06190093.1| serralysin [Serratia odorifera 4Rx13]
gi|270043697|gb|EFA16789.1| serralysin [Serratia odorifera 4Rx13]
Length = 490
Score = 307 bits (785), Expect = 6e-81, Method: Composition-based stats.
Identities = 99/398 (24%), Positives = 160/398 (40%), Gaps = 55/398 (13%)
Query: 2 HNIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFD----------------- 43
N KP + + R +Q W+ I + +T +D
Sbjct: 30 VNNKPSFDVGEAGQQIARSEQTWNGVHITGQGATVTYSFPDWDYNQTNLNSVFFRADDRE 89
Query: 44 --ITELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGY----------- 88
++ Q A+ +L W+ V ++TF E + SDI F +
Sbjct: 90 TGLSAFTAEQQAQAKLSLQSWADVANITFVEVAPGHKSDITFGNYEGAGQAYAIKPFTQA 149
Query: 89 ---VCTPRYDSRYFMEINFDKADVWRYGIGK-----GTILSHNALHEIGHALGLMHPGSY 140
+ + +N+D AD G HEIGH LGL HPG Y
Sbjct: 150 GNDYSGQHVAGQSWYNVNYDVADTGDGVYANLHPDLGNYGRLTFTHEIGHTLGLDHPGDY 209
Query: 141 NGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
N G Y Y D+ SVMSY+ + D Y A P+V DI A+Q +YGA
Sbjct: 210 NAGDGATYKSVPTYAEDTRQFSVMSYWNESYTGGDNGGHYAAAPLVDDIAAIQYLYGANT 269
Query: 200 GSL-GNNIYKI---------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ G+++Y + +++D GG D LD + I+L S
Sbjct: 270 STRAGDSVYGFHSNTGRDFYTANDSSQKLVFSVWDGGGKDTLDFSGYS-QDQRINLTAGS 328
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S +GG + N++IA IE+ +G SGNDV++GN+A N+ +GNDV G G D
Sbjct: 329 FSDVGGLKGNISIAAGVTIENAIGGSGNDVIVGNNAANIIKGGAGNDVIYGGGGQDQLSG 388
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ ++ ++ Y + + DF + ++++ +
Sbjct: 389 GSGKDIFVFAAVSDS--PYTSPDKILDFETGIDKIDLS 424
>gi|62754185|gb|AAX99110.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 307 bits (785), Expect = 6e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 151/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNIPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|62754171|gb|AAX99103.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 307 bits (785), Expect = 6e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 152/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA ++ +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDPVYGFNSNPDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|330900592|gb|EGH32011.1| serralysin [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 476
Score = 306 bits (784), Expect = 6e-81, Method: Composition-based stats.
Identities = 99/375 (26%), Positives = 156/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD++LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAADYILRDDAAWTDRDGNGIINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-------- 103
+ A ++ W+ V ++F + + D N Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSW 157
Query: 104 --FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
D + G HEIGH LGL HPG YN G D Y D+
Sbjct: 158 YLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA+
Sbjct: 278 DFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ VG SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 337 VVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAGQDTIRDF 405
>gi|289679140|ref|ZP_06500030.1| serralysin [Pseudomonas syringae pv. syringae FF5]
Length = 476
Score = 306 bits (784), Expect = 7e-81, Method: Composition-based stats.
Identities = 99/375 (26%), Positives = 156/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD++LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAADYILRDDAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-------- 103
+ A ++ W+ V ++F + + D N Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSW 157
Query: 104 --FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
D + G HEIGH LGL HPG YN G D Y D+
Sbjct: 158 YLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA+
Sbjct: 278 DFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ VG SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 337 VVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAGQDTIRDF 405
>gi|66046392|ref|YP_236233.1| serralysin [Pseudomonas syringae pv. syringae B728a]
gi|63257099|gb|AAY38195.1| Serralysin [Pseudomonas syringae pv. syringae B728a]
gi|330972872|gb|EGH72938.1| serralysin [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 476
Score = 306 bits (783), Expect = 8e-81, Method: Composition-based stats.
Identities = 98/375 (26%), Positives = 156/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD++LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAADYILRDDASWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-------- 103
+ A ++ W+ V ++F + + D N Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSW 157
Query: 104 --FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
D + G HEIGH LGL HPG YN G D Y D+
Sbjct: 158 YLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA+
Sbjct: 278 DFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ +G SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 337 VVENALGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAGQDTIRDF 405
>gi|62754175|gb|AAX99105.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 306 bits (783), Expect = 9e-81, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 152/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA ++ +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDPVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|541038|pir||JN0892 metalloproteinase (EC 3.4.24.-) B - Erwinia chrysanthemi
Length = 478
Score = 306 bits (783), Expect = 1e-80, Method: Composition-based stats.
Identities = 101/381 (26%), Positives = 166/381 (43%), Gaps = 41/381 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF---------DITELNPNA 51
N K Y+ + A + R+ W+ + K LT L + N
Sbjct: 42 VNGKTSYSADHAA-QITRENVSWNGTNVFGKSANLTFKFLQSATSTPAGDKGFVKFNAEQ 100
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------------NGYVCTP-RYDSR 97
+ AL W+ V +LTF E + + N Y P Y
Sbjct: 101 IAQTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYPGNYQGA 160
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEND 156
N++++++ G + HEIGHALGL HPG YN G D Y D
Sbjct: 161 GSSWYNYNQSNIRSPGTEE--YGRQTLTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAED 218
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI------ 209
S+ S+MSY+ ++ D + Y PM+ DI A+Q++YGA + G+++Y
Sbjct: 219 SYQFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFHSNTDR 278
Query: 210 ---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG+D D + I+LN S+S +GG + N++IA
Sbjct: 279 DFYTANDSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAHGV 337
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GN A+NV +GND+ G++G DT A + +++ +
Sbjct: 338 TIENAIGGSGNDLLVGNGADNVLQGGAGNDILYGAAGADTLSGGAGRDTFVYGSGQDSTV 397
Query: 327 VYDANEHKQDFLSDVERLRFA 347
A + DF S +++ +
Sbjct: 398 --SAYDWINDFQSGADKIDLS 416
>gi|271500588|ref|YP_003333613.1| Serralysin [Dickeya dadantii Ech586]
gi|270344143|gb|ACZ76908.1| Serralysin [Dickeya dadantii Ech586]
Length = 477
Score = 305 bits (782), Expect = 1e-80, Method: Composition-based stats.
Identities = 100/380 (26%), Positives = 160/380 (42%), Gaps = 42/380 (11%)
Query: 5 KPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNPNAQ 52
KP YT E+ D + R W+ + KP LT L + N
Sbjct: 41 KPSYTLEQARDQITRGNVTWNGDHVFGKPVALTYAFLQSVSDANMPDNYKGFVKFNAAQI 100
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG--------------YVCTPRYDSRY 98
+ AR AL W+ V ++TF E N +
Sbjct: 101 QQARLALQSWADVANVTFTEVKNPQQATIKFGNYTLTSDGHTDNNSQAFGFYPGNWKWAG 160
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
N+++AD R I + + HEIGH LGL HPG Y+ G D Y D+
Sbjct: 161 SAWFNYNQADNQRPDINE--FGRNTLAHEIGHTLGLYHPGDYDASDGNPGYKDVTYAEDT 218
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI------- 209
S+MSY+ + D + A P++ DI A+QK+YGA + G+ +Y
Sbjct: 219 RQFSIMSYWNEGYTGGDFHGYHAAAPLMDDIAAIQKLYGANMTTRTGDTVYGFHSNAGRD 278
Query: 210 --EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+P I +++D+GG+D D + I L + ++S +GG + N++IA V
Sbjct: 279 FYTATDSKTPLIFSVWDAGGNDTFDFSGYS-SNQRISLISGTFSDVGGLKGNVSIAAGAV 337
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+ +G SGNDV++GN ++N +GNDV G G D A ++ +++ +
Sbjct: 338 IENAIGGSGNDVIVGNLSDNRIDGGAGNDVLYGDGGADILTGGAGKDIFVYAWEKDS--L 395
Query: 328 YDANEHKQDFLSDVERLRFA 347
A + DF +++ +
Sbjct: 396 ASAPDTITDFQRGEDKIDLS 415
>gi|62754181|gb|AAX99108.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 305 bits (781), Expect = 2e-80, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 151/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKSSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + N++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWDGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|60101756|gb|AAX13994.1| EprB [Erwinia chrysanthemi]
Length = 480
Score = 305 bits (781), Expect = 2e-80, Method: Composition-based stats.
Identities = 98/362 (27%), Positives = 165/362 (45%), Gaps = 40/362 (11%)
Query: 2 HNIKPVYTTERIADH-LLRDQY-WSNYFIRYKPDVLTTHRLSFDIT---------ELNPN 50
N KP Y+T++ + L R W+ + K LT L+ + + P
Sbjct: 41 VNGKPSYSTDKAVEEGLTRPHTTWNGDNVYGKAANLTYSFLNTFSSTPNGHTGPVKFTPV 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYFM-------- 100
+ + +L WS V +LTF E S + +++ F + + D++ +
Sbjct: 101 QMQQVKLSLQSWSDVANLTFTEVSPNQKANLTFANYTRNADGSIENDTQAYAAYPGQHPL 160
Query: 101 ----EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP--VYGVDNDYE 154
N+++ + + HEIGHALGL HP YN G Y Y
Sbjct: 161 SGSAWFNYNQPSIRNPDTEE--YGRQTFTHEIGHALGLSHPAEYNAGEGDISYKNSAVYA 218
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI---- 209
DS S+MSY+ +++ D Y A P++ DI A+QK+YGA + G+++Y
Sbjct: 219 EDSRQFSIMSYWDIENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDSVYGFHSNT 278
Query: 210 -----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
I +++D+GG+D D + I+LN S+S +GG + N++IA
Sbjct: 279 DRDFYTANDSSKALIFSVWDAGGNDTFDFSGYSN-NQRINLNEGSFSDVGGLKGNVSIAH 337
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ +G SGND+++GN A+NV +G+DV GS+G DT A +++ +++
Sbjct: 338 GVTIENAIGGSGNDLLVGNGADNVLQGGAGDDVLYGSTGADTLVGGAGRHIFVYGSGQDS 397
Query: 325 II 326
Sbjct: 398 TS 399
>gi|70729851|ref|YP_259590.1| protease PrtA [Pseudomonas fluorescens Pf-5]
gi|68344150|gb|AAY91756.1| protease PrtA [Pseudomonas fluorescens Pf-5]
Length = 515
Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats.
Identities = 104/412 (25%), Positives = 165/412 (40%), Gaps = 56/412 (13%)
Query: 1 MHNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLT---------THRLSFDITELNPN 50
+ N KP +T ++ AD +LR W + K D+ + +E +
Sbjct: 74 LVNGKPSFTADQAADSILRKGLSWHDQNGDGKIDLSYSFLTEKPANYNPALGSFSEFSAL 133
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
+ A +L W+ V ++TF E + D N V T Y + W
Sbjct: 134 QKAQALLSLQSWADVANVTFTEAAKGGDGHMSFGNYN-VSTGGAAFAYLPSGSSYDGQSW 192
Query: 111 ---------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
G G HEIGH+LGL HPG YN G D Y D+
Sbjct: 193 YLINDQYRVNETPGNGNYGRQTLTHEIGHSLGLSHPGVYNAGSGSPTYNDVTYAQDTRGY 252
Query: 161 SVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ--- 212
S+MSY+ ++ D S Y + P++ DIVAVQK+YGA + + +Y
Sbjct: 253 SLMSYWSESNTGQDFSKDGGGAYASAPLLDDIVAVQKLYGANLETRADDTVYGFNSNTGR 312
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ ++D GG+D LD + I+LN +S +GG N++IA
Sbjct: 313 DFYSAHSASDKLVFAVWDGGGNDTLDFSGFT-QNQKINLNEGGFSDVGGLVGNVSIAHGV 371
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYLYK 317
+E+ +G SGND++IGN+A N+ +GND+ G +G DTF Y A +
Sbjct: 372 TVENAIGGSGNDLLIGNAAANILEGGAGNDIIYGGGGGDTLWGGAGADTFVYGAAADS-- 429
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+DA + DF+S +++ + + + +
Sbjct: 430 ---------TFDAPDWIMDFVSGEDKIDLTGIPQFASGGATLNFVSGFTGHA 472
>gi|330875816|gb|EGH09965.1| alkaline metalloendoprotease [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 475
Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats.
Identities = 96/374 (25%), Positives = 153/374 (40%), Gaps = 41/374 (10%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ A+ +LRD WS+ ++ T + + N
Sbjct: 38 INGKPSYSVDQAANFILRDHAAWSDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW- 110
+ A ++ W+ V ++F + + D N + Y W
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSSGGAAFAYLPSGGRTDGQSWY 157
Query: 111 --------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTS 161
G HEIGH LGL HPG YN G D Y D+ S
Sbjct: 158 LIDDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYKDATYAEDTRGYS 217
Query: 162 VMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIE------ 210
VMSY+ ++ + G Y + P++ DI AVQ++YGA + + +Y
Sbjct: 218 VMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFNSTAGRD 277
Query: 211 ---VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
S + +++D GG D LD + I+LN S+S +GG N++IA+ V
Sbjct: 278 FYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGVV 336
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+ +G SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 337 VENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS------ 390
Query: 328 YDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 391 SDSNRAAQDTIRDF 404
>gi|62754179|gb|AAX99107.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 304 bits (779), Expect = 3e-80, Method: Composition-based stats.
Identities = 92/368 (25%), Positives = 151/368 (41%), Gaps = 41/368 (11%)
Query: 13 IADHLLR-DQYW-------------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA 58
A L+R D W F+ KPD + H + + N + A+ +
Sbjct: 51 AAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKLS 108
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-------- 110
+ W+ V ++ F ET+ + T Y Y + W
Sbjct: 109 IQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRTF 168
Query: 111 -RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
I HEIGH LGL HP YN P Y Y DS +VMSYF
Sbjct: 169 LNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYF 228
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ---------QKDS 216
+++ D Y + P+++DI A+Q +YGA + +Y ++S
Sbjct: 229 GEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENS 288
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D+GG+D D + I+LN S+S +GG + +++IA+ IE+ +G SG
Sbjct: 289 KLLFTAWDTGGNDTFDFSGFT-QGQRINLNEASFSDVGGLKGDVSIARGVTIENAIGGSG 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+IGN A N +G+D+ G G D + + + + + + + D
Sbjct: 348 NDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESPPLE--RDWIHD 405
Query: 337 FLSDVERL 344
F+S +++
Sbjct: 406 FVSGKDKI 413
>gi|8895497|gb|AAF80994.1| metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 304 bits (778), Expect = 3e-80, Method: Composition-based stats.
Identities = 100/428 (23%), Positives = 168/428 (39%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP ++ ++ ADHLLRD + + K D+ T S ++ N
Sbjct: 37 VNGKPSFSVDQAADHLLRDGASYKDVNHNGKIDLTYTFLTSASSATLNKHGISGFSQFNA 96
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ WS V +++F E++ D N + P + Y
Sbjct: 97 QQKAQAVLAMQSWSDVANVSFTESASGGDTHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + EIGH LGL HPG YN G D D+ D+
Sbjct: 157 SWYLTNSSYTPNKTPDVNNYGRQTLTQEIGHTLGLAHPGDYNAGTGNPSCKDADHGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYG-APKGSLGNNIYKIE--- 210
SVMSY+ ++ + + G Y + P++ DI A+QK+YG G+ Y
Sbjct: 217 GYSVMSYWSESNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGGVYSTRAGDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+ N S+S +GG N++IA+
Sbjct: 277 GRDFYSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINPNEASFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E+ G SGND++IGN+A N+ +GND+ G G D + A ++
Sbjct: 336 GVTVENAFGGSGNDLIIGNNAANLIKGGAGNDIIYGGGGADQLWGGAGKD--TFVYGASS 393
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + DF S +++ + + + + A L G ++
Sbjct: 394 DSKPGAADKIFDFTSGSDKIDLSGITKGA-GLSFVNAFTGHAGDAVLSYASGTNLGTLAV 452
Query: 385 HFYEFGLS 392
G++
Sbjct: 453 DLSGHGVA 460
>gi|237801166|ref|ZP_04589627.1| serralysin [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024023|gb|EGI04080.1| serralysin [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 476
Score = 304 bits (778), Expect = 4e-80, Method: Composition-based stats.
Identities = 101/375 (26%), Positives = 156/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD+LLRD W++ ++ T + + N
Sbjct: 38 VNGKPSYSVDQAADYLLRDDAAWADRDGNGTINLTYTFLTAKPAGFNNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR 111
+ A ++ W+ V ++F + + D N Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGNAGGAAFAYLPSGNSRTDGQSW 157
Query: 112 Y----------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
Y G H HEIGH LGL HPG YN G D Y D+
Sbjct: 158 YLVDNSYKLNTTPDNGNYGRHTLTHEIGHTLGLSHPGDYNAGEGNPAYKDASYAEDTLGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE----- 210
SVMSY+ ++ + G Y + P + DI AVQ++YGA + G+ +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGAPAYSSGPQLDDIAAVQQLYGANMSTRAGDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA+
Sbjct: 278 DFYSATSAASKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ VG SGND++IGN+A N +GND+ G +G D+ A + ++
Sbjct: 337 VVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGAGADSLTGGAGADVFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAAQDTIRDF 405
>gi|152986695|ref|YP_001349497.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PA7]
gi|150961853|gb|ABR83878.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PA7]
Length = 479
Score = 302 bits (774), Expect = 1e-79, Method: Composition-based stats.
Identities = 98/408 (24%), Positives = 168/408 (41%), Gaps = 49/408 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQY-W----SNYFIRYKPDVLTTHRLSFD------------ 43
+ N P YT ++ AD +LR+ W + + LT F+
Sbjct: 32 LVNGHPSYTVDQAADQILRENAAWQKAPGDSVLTLSYSFLTKPNDFFNSPWKYVSDIYSL 91
Query: 44 --ITELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
+ + Q + +L WS V + F + D+ F + + P
Sbjct: 92 GKFSAFSAQQQAQTKLSLQSWSDVAKINFVDAGQGEQGDLVFGNFSSSVGGAAFAFLPDV 151
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + G HEIGH LGL HPG YN G
Sbjct: 152 QDALKGQSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYA 209
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+Q++YGA G+ +Y
Sbjct: 210 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQQLYGANLTTRTGDTVYG 269
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 270 FNSNTERDFYSATSSTSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGN 328
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D+++GN NV +GND+ G G D + + + +
Sbjct: 329 VSIAAGATVENAIGGSGSDLLVGNQVANVLKGGAGNDILYGGLGADQLWGGSGADTFVYG 388
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + A + +DF+S +++ D V +L+Y +
Sbjct: 389 AIDESSAA--APDTLRDFVSGQDKI---DLSGLDAFVNGGLLLQYVDA 431
>gi|157370627|ref|YP_001478616.1| serralysin [Serratia proteamaculans 568]
gi|157322391|gb|ABV41488.1| Serralysin [Serratia proteamaculans 568]
Length = 490
Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats.
Identities = 101/397 (25%), Positives = 168/397 (42%), Gaps = 55/397 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFD------------------ 43
N KP + E + R +Q W+ + K +T +D
Sbjct: 31 NNKPSFGVEEAGKQIARSEQTWNGIHVTGKGATVTYSFPDWDYNQSNLNFRFGSNNQDTG 90
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDIKFIS---SNNGYVCTP------ 92
++ + A+ +L W+ V +LTF E + S+I F + S Y P
Sbjct: 91 LSAFTAEQKAQAKLSLQSWADVANLTFVEVAPDQKSNITFGNYEGSGQAYAIKPFSGAGN 150
Query: 93 -----RYDSRYFMEINFDKADVWRYGIGK-----GTILSHNALHEIGHALGLMHPGSYNG 142
D + + IN+D AD G + HE+GH LGL HPG YN
Sbjct: 151 DYRGHNTDGQSWFNINYDYADPRDGVYANLHPELGNYGRLSITHELGHTLGLDHPGKYNA 210
Query: 143 GYPVYGVD--NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+Y D+ SVMSY+ + D + A P+V DI A+Q +YGA
Sbjct: 211 DENNPPNYSMANYAEDTRQFSVMSYWDESLTGGDNGGHFAAAPLVDDIAAIQYLYGANTT 270
Query: 201 S-LGNNIYKIEV---------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ G+ +Y + + +++D+GG+D LD + I+L S+
Sbjct: 271 TRTGDTVYGFNSNTGRDFYTLTDSNQKLVFSVWDAGGNDTLDFSGYT-QNQRINLTEGSF 329
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S +GG + N++IA VIE+ +G SGNDV++GN A N+ +GNDV G G D F
Sbjct: 330 SDVGGLKGNVSIAVGAVIENAIGGSGNDVIVGNDAANIIHGGAGNDVIYGGGGQDQLFGG 389
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ ++ ++ + + + DF + ++++ +
Sbjct: 390 SGKDIFVFSAVSDSS--FKSPDKILDFETGIDKIDLS 424
>gi|213970068|ref|ZP_03398200.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato T1]
gi|301381424|ref|ZP_07229842.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato
Max13]
gi|302058422|ref|ZP_07249963.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato K40]
gi|302130329|ref|ZP_07256319.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213925172|gb|EEB58735.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato T1]
gi|331017237|gb|EGH97293.1| alkaline metalloendoprotease [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 475
Score = 301 bits (771), Expect = 2e-79, Method: Composition-based stats.
Identities = 95/374 (25%), Positives = 152/374 (40%), Gaps = 41/374 (10%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ A+ +LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAANFILRDDAAWADRDGNGTINLTYTFLTAKPAGFNNALGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW- 110
+ A ++ W+ V ++F + + D N Y W
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSNGGSAFAYLPSGGRTDGQSWY 157
Query: 111 --------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTS 161
G HEIGH LGL HPG YN G D Y D+ S
Sbjct: 158 LISDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGDGNPTYKDATYAEDTRGYS 217
Query: 162 VMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIE------ 210
VMSY+ ++ + G Y + P++ DI AVQ++YGA + + +Y
Sbjct: 218 VMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFNSTAGRD 277
Query: 211 ---VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
S + +++D GG D LD + I+LN S+S +GG N++IA+ V
Sbjct: 278 FYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGVV 336
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+ +G SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 337 VENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS------ 390
Query: 328 YDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 391 SDSNRAAQDTIRDF 404
>gi|28870496|ref|NP_793115.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28853744|gb|AAO56810.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 475
Score = 301 bits (771), Expect = 3e-79, Method: Composition-based stats.
Identities = 97/375 (25%), Positives = 154/375 (41%), Gaps = 43/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ A+ +LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAANFILRDDAAWADRDGNGTINLTYTFLTAKPAGFNNALGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW- 110
+ A ++ W+ V ++F + + D N Y W
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSNGGSAFAYLPSGGRTDGQSWY 157
Query: 111 --------RYGIGKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSFLT 160
G HEIGH LGL HPG YN G P Y D Y D+
Sbjct: 158 LISDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAVDGNPTY-KDATYAEDTRGY 216
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + + +Y
Sbjct: 217 SVMSYWSESNTDQNFVKGGASSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFNSTAGR 276
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA+
Sbjct: 277 DFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGV 335
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ +G SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 336 VVENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS----- 390
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 391 -SDSNRAAQDTIRDF 404
>gi|330958198|gb|EGH58458.1| alkaline metalloendoprotease [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 476
Score = 301 bits (770), Expect = 3e-79, Method: Composition-based stats.
Identities = 97/375 (25%), Positives = 156/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ A+++LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAANYILRDDASWADRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR 111
+ A ++ W+ V ++F + + D N + Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYTDGSSGGAAFAYLPSGNSRTDGQSW 157
Query: 112 Y----------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
Y G HEIGH LGL HPG YN G D Y D+
Sbjct: 158 YLINSSYQQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTYNDVSYAEDTRGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + + +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGAASYSSAPLLDDIAAVQQLYGANMSTRATDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA++
Sbjct: 278 DFYSATSAASKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKNV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ +G SGND++IGNSA N +GND+ G G D+ A + ++
Sbjct: 337 VVENAIGGSGNDLLIGNSAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAAQDTIRDF 405
>gi|17978658|gb|AAL47190.1| S-layer editing metalloprotease SapA [Caulobacter vibrioides]
Length = 658
Score = 300 bits (768), Expect = 5e-79, Method: Composition-based stats.
Identities = 105/433 (24%), Positives = 172/433 (39%), Gaps = 50/433 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYF-----IRYKPDVLTTHRL---SFDITELNPNAQ 52
+ K T A LLR + WSN F + Y + + ++ N
Sbjct: 40 VDGKKSLTVPEAALQLLRSEPGWSNQFLVPATVTYAFRATAPASMPSDTGGFSQFNAAQI 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINF-------- 104
A AL WS V ++TF + + S+N + + + F
Sbjct: 100 LQAEKALQAWSDVANITFVRVGQGTSGEAAYSDNASILFANFSTGSEGSAGFAYYPGNPA 159
Query: 105 ---DKADVW-------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGVDN 151
DVW +HE+GHA+G+ HP YN Y V+
Sbjct: 160 ASSRSGDVWIKSTAGYNTNPTGSNYGGMVLVHELGHAIGIAHPSEYNASADDTLTYAVNA 219
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y DS +VMSYF ++ Y ++P++ DI A Q YGA + G+ +Y
Sbjct: 220 TYYQDSRQYTVMSYFSEANTGGSFGGAYASSPLLDDIAAAQLAYGANMTTRTGDTVYGFN 279
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + ++D+GG D LD + V IDL +SS+GG + N+T
Sbjct: 280 STAGREWFAATSSSTRLVFAVWDAGGVDTLDFSGY-RVAQTIDLRAGYFSSVGGLKGNVT 338
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA + VIE+ +G S D + GN+ +N +G D+ DG G+DT + Y +
Sbjct: 339 IAMNAVIENAIGGSAADTINGNAVDNRLTGGAGADILDGGRGVDTAVFSGAYGNYTLTAA 398
Query: 322 ENAI--IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-------EYTASYEDLI 372
N ++ D L+++E L F D+ + V+ + + + ++AS E L
Sbjct: 399 TNGAWSVLDRVGTDATDTLANIEFLAFTDRTVTLVDSRVATAISNILRLQTFSASAEPLS 458
Query: 373 QVIGQDVFESMKH 385
+ + + H
Sbjct: 459 KSLAASMAAGASH 471
>gi|16124999|ref|NP_419563.1| alkaline metalloproteinase [Caulobacter crescentus CB15]
gi|221233720|ref|YP_002516156.1| secreted protease precursor sapA [Caulobacter crescentus NA1000]
gi|13421979|gb|AAK22731.1| alkaline metalloproteinase, putative [Caulobacter crescentus CB15]
gi|220962892|gb|ACL94248.1| secreted protease precursor sapA [Caulobacter crescentus NA1000]
Length = 658
Score = 299 bits (766), Expect = 9e-79, Method: Composition-based stats.
Identities = 104/433 (24%), Positives = 171/433 (39%), Gaps = 50/433 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYF-----IRYKPDVLTTHRL---SFDITELNPNAQ 52
+ K T A LLR + WSN F + Y + + ++ N
Sbjct: 40 VDGKKSLTVPEAALQLLRSEPGWSNQFLVPATVTYAFRATAPASMPSDTGGFSQFNAAQI 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINF-------- 104
A AL WS V ++TF + + S+N + + + F
Sbjct: 100 LQAEKALQAWSDVANITFVRVGQGTSGEAAYSDNASILFANFSTGSEGSAGFAYYPGNPA 159
Query: 105 ---DKADVW-------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGVDN 151
DVW +HE+GHA+G+ HP YN Y +
Sbjct: 160 ASSRSGDVWIKSTAGYNTNPTGSNYGGMVLVHELGHAIGIAHPSEYNASADDTLTYAANA 219
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y DS +VMSYF ++ Y ++P++ DI A Q YGA + G+ +Y
Sbjct: 220 TYYQDSRQYTVMSYFSEANTGGSFGGAYASSPLLDDIAAAQLAYGANMTTRTGDTVYGFN 279
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + ++D+GG D LD + V IDL +SS+GG + N+T
Sbjct: 280 STAGREWFAATSSSTRLVFAVWDAGGVDTLDFSGY-RVAQTIDLRAGYFSSVGGLKGNVT 338
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA + VIE+ +G S D + GN+ +N +G D+ DG G+DT + Y +
Sbjct: 339 IAMNAVIENAIGGSAADTINGNAVDNRLTGGAGADILDGGRGVDTAVFSGAYGNYTLTAA 398
Query: 322 ENAI--IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-------EYTASYEDLI 372
N ++ D L+++E L F D+ + V+ + + + ++AS E L
Sbjct: 399 TNGAWSVLDRVGTDATDTLANIEFLAFTDRTVTLVDSRVATAISNILRLQTFSASAEPLS 458
Query: 373 QVIGQDVFESMKH 385
+ + + H
Sbjct: 459 KSLAASMAAGASH 471
>gi|330981411|gb|EGH79514.1| serralysin [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 476
Score = 298 bits (764), Expect = 2e-78, Method: Composition-based stats.
Identities = 98/375 (26%), Positives = 155/375 (41%), Gaps = 42/375 (11%)
Query: 2 HNIKPVYTTERIADHLLRD-QYWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD++LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAADYILRDDAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR 111
+ A ++ W+ V ++F + + D N Y N
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQSW 157
Query: 112 Y----------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
Y G +EIGH LGL HPG YN G D Y D+
Sbjct: 158 YLVDNNYKVNTTPDNGNYGRPTLTNEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTHGY 217
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE----- 210
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + G+ +Y
Sbjct: 218 SVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAGR 277
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG D LD + I+LN S+S +GG N++IA+
Sbjct: 278 DFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGMVGNVSIAKGV 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ VG SGND++IGN+A N +GND+ G G D+ A + ++
Sbjct: 337 VVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGAS----- 391
Query: 327 VYDANEHKQDFLSDV 341
D+N QD + D
Sbjct: 392 -SDSNRAGQDTIRDF 405
>gi|307131044|ref|YP_003883060.1| secreted protease C [Dickeya dadantii 3937]
gi|306528573|gb|ADM98503.1| Secreted protease C precursor [Dickeya dadantii 3937]
Length = 477
Score = 297 bits (761), Expect = 3e-78, Method: Composition-based stats.
Identities = 96/380 (25%), Positives = 158/380 (41%), Gaps = 42/380 (11%)
Query: 5 KPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNPNAQ 52
KP YT E+ D + R W+ + K LT L + N
Sbjct: 41 KPSYTLEQARDQITRGNITWNGEKVFGKSAALTYSFLQSVADSDMPDNFKGFVKFNAAQI 100
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG--------------YVCTPRYDSRY 98
+ + AL W+ V ++TF E N +
Sbjct: 101 QQTKLALQSWADVANVTFSEAKDGERATIQFGNYTLTPDGNTDNNSQAFGFYPGNWKWAG 160
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
N+++AD R I + + HEIGH LGL HPG Y+ G D Y D+
Sbjct: 161 SAWFNYNQADNQRPDINE--FGRNTLTHEIGHTLGLYHPGDYDASDGNPGYKDVTYAEDT 218
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI------- 209
S+MSY+ + D + A P++ DI A+QK+YGA + G+ +Y
Sbjct: 219 RQFSIMSYWNEGYTGGDFHGYHAAAPLMDDIAAIQKLYGANMSTRTGDTVYGFHSNSGRD 278
Query: 210 --EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+P I +++D+GG+D D + I L + ++S +GG + N++IA V
Sbjct: 279 FYTATDSKTPLIFSVWDAGGNDTFDFSGYS-ANQRISLISGTFSDVGGLKGNVSIAAGAV 337
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+ +G SG+DV++GN ++N +GNDV G G D A ++ +++ +
Sbjct: 338 MENAIGGSGHDVIVGNLSDNRIDGGAGNDVLYGDGGADILTGGAGKDIFVYAWEKDS--L 395
Query: 328 YDANEHKQDFLSDVERLRFA 347
A + DF +R+ +
Sbjct: 396 SSAPDTITDFQRGEDRIDLS 415
>gi|284006975|emb|CBA72251.1| metalloprotease [Arsenophonus nasoniae]
Length = 508
Score = 297 bits (759), Expect = 5e-78, Method: Composition-based stats.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 39/343 (11%)
Query: 5 KPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----DITELNPNAQEVARWA 58
K Y ++ ++R Q W++ +P +T + +L Q+ AR A
Sbjct: 15 KDSYDIDQAGQQIIRQQATWNSEQQIGQPAAVTYSFSRWQEYYTGYHQLTEKQQQQARIA 74
Query: 59 LGEWSKVVDLTFEE-TSIHSDIKFIS----SNNGYVCTPRYDSRYFMEINFDKADVWRYG 113
L W+ V ++TF E + ++I F + + P+ ++ +
Sbjct: 75 LDSWADVANITFTEDATQTTNINFGNFHSMQGQAFAYLPQSGAQAGQCWFNAEDHPENLD 134
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYN-----------------GGYPVYGVDNDYEND 156
G +HEIGHA+GL HPG YN Y + YE D
Sbjct: 135 PQPGNYGRLVLVHEIGHAIGLSHPGDYNWASIDQQTQTLKWTRNTDSALSYSANAPYEED 194
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKD 215
S SVMSY+ + + Y + P++ DI AVQ +YGA G+++Y
Sbjct: 195 SRQFSVMSYWSEYHTGGNFHGHYASAPLIDDIAAVQALYGANMRTRTGDDVYGFNSTTNK 254
Query: 216 SPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ I +++D+GG+D LD + + I+LN ++S++GG+ KN++IA++T
Sbjct: 255 DWYTISDPRIGCIFSVWDAGGNDTLDFSGYSKL-QLINLNAGTFSNVGGWIKNVSIAKNT 313
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
VIE+ G G D +IGNS +N+ +G D+ G G D +
Sbjct: 314 VIENAFGGYGQDTIIGNSVDNIIKGGAGEDIIYGGLGQDILWG 356
>gi|30014084|emb|CAD89200.1| metalloprotease [Pseudomonas fluorescens]
Length = 481
Score = 297 bits (759), Expect = 6e-78, Method: Composition-based stats.
Identities = 105/430 (24%), Positives = 173/430 (40%), Gaps = 47/430 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQE------- 53
N KP ++ ++ A LLRD + + K ++ T S + +N +
Sbjct: 43 VNGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGITGFSQFSA 102
Query: 54 ----VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY--F 99
A+ A+ W+ V ++TF E + D N + P + Y
Sbjct: 103 QQQAQAKLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 162
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ HEIGH+LGL HPG YN G D Y D+
Sbjct: 163 SWYLINSGYTQNKNPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGNGNPTYNDASYGQDTR 222
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP------------KGSL 202
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 223 GYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNT 282
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + + + +++D+GG D LD + I+LN S+S +GG N++I
Sbjct: 283 GRDF--LSASSSSDKVVFSVWDAGGKDTLDFSGFT-QNQKINLNDASFSDVGGMVGNVSI 339
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A+ +IE+ +G SGND++IGNS N +GND+ G G D + A S +
Sbjct: 340 AKGAIIENAIGGSGNDLLIGNSVANELKGGAGNDILWGGGGADKLWGGAGSDTFVFAASS 399
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ A + DF+S ++++ D + + +T S D I
Sbjct: 400 DS--KPGAIDQILDFVSGLDKI---DLTGITNGAGLHFVSSFTGSAGDAILTSSGGNSLL 454
Query: 383 MKHFYEFGLS 392
F G++
Sbjct: 455 SVDFSGHGVA 464
>gi|330937697|gb|EGH41595.1| serralysin [Pseudomonas syringae pv. pisi str. 1704B]
Length = 785
Score = 294 bits (753), Expect = 3e-77, Method: Composition-based stats.
Identities = 126/411 (30%), Positives = 195/411 (47%), Gaps = 38/411 (9%)
Query: 9 TTERIADHLLRDQYWSNYF--IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
T ++ A++L D YW + + ++ DV L+ ++ L+ +AQ VAR+AL W+ V
Sbjct: 36 TLDQQANYLT-DGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVVARYALQTWTNVS 94
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
L F ET+ + I F +G Y + + + A W + G +H
Sbjct: 95 GLNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIH 151
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMV 185
EIGHALGL H G+YNG + + Y+ DS+ SVMSYF +++ +ASFGY ATPM+
Sbjct: 152 EIGHALGLGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPML 210
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF------IQTIYDSGGDDLLDLTLIGGV 239
+DIVA+Q +YG G+N Y ++ + TIYDSGG+D ++++ G
Sbjct: 211 ADIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPSLVATIYDSGGNDTINVSTYAGA 270
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++N ++GND
Sbjct: 271 -QTVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQ 329
Query: 300 GSSGLDTFFYYAPSY----------------------LYKIYRFENAII-VYDANEHKQD 336
G G D A S Y NA + V+DA D
Sbjct: 330 GGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNATLSVHDAQTSDVD 389
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
LS VERL F+D+ + Y A + + + H
Sbjct: 390 TLSSVERLSFSDRNASLDELLMAFPSRYGAFNAESDATVSLSFSTDLHHIA 440
>gi|34559722|gb|AAQ75527.1| organic solvent-tolerant protease [Pseudomonas aeruginosa]
Length = 479
Score = 293 bits (751), Expect = 5e-77, Method: Composition-based stats.
Identities = 101/408 (24%), Positives = 166/408 (40%), Gaps = 49/408 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------- 52
+ N P YT ++ A+ +LR+Q L+ L+ N +
Sbjct: 32 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 91
Query: 53 -----------EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
A+ +L WS V ++ F + D+ F + + P
Sbjct: 92 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 151
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + G HEIGH LGL HPG YN G
Sbjct: 152 PDALKGQSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYA 209
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 210 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYG 269
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 270 FNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGN 328
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D++IGN NV +GND+ G G D + A +
Sbjct: 329 VSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGTD--TFV 386
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A A + +DF+S +++ D V +L+Y +
Sbjct: 387 YGDIAESSAAAPDTLRDFVSGQDKI---DLSGLDAFVNGGLVLQYVDA 431
>gi|15596446|ref|NP_249940.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAO1]
gi|254234376|ref|ZP_04927699.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa C3719]
gi|254239625|ref|ZP_04932947.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 2192]
gi|416632|sp|Q03023|APRA_PSEAE RecName: Full=Alkaline metalloproteinase; Short=AP; Flags:
Precursor
gi|1311334|pdb|1KAP|P Chain P, Three-Dimensional Structure Of The Alkaline Protease Of
Pseudomonas Aeruginosa: A Two-Domain Protein With A
Calcium Binding Parallel Beta Roll Motif
gi|9947180|gb|AAG04638.1|AE004554_6 alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAO1]
gi|45283|emb|CAA45858.1| alkaline protease [Pseudomonas aeruginosa PAO1]
gi|126166307|gb|EAZ51818.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa C3719]
gi|126193003|gb|EAZ57066.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 2192]
Length = 479
Score = 293 bits (751), Expect = 5e-77, Method: Composition-based stats.
Identities = 101/408 (24%), Positives = 166/408 (40%), Gaps = 49/408 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------- 52
+ N P YT ++ A+ +LR+Q L+ L+ N +
Sbjct: 32 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 91
Query: 53 -----------EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
A+ +L WS V ++ F + D+ F + + P
Sbjct: 92 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 151
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + G HEIGH LGL HPG YN G
Sbjct: 152 PDALKGQSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYA 209
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 210 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYG 269
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 270 FNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGN 328
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D++IGN NV +GND+ G G D + A +
Sbjct: 329 VSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGAD--TFV 386
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A A + +DF+S +++ D V +L+Y +
Sbjct: 387 YGDIAESSAAAPDTLRDFVSGQDKI---DLSGLDAFVNGGLVLQYVDA 431
>gi|229589310|ref|YP_002871429.1| putative metalloprotease [Pseudomonas fluorescens SBW25]
gi|229361176|emb|CAY48040.1| putative metalloprotease [Pseudomonas fluorescens SBW25]
Length = 510
Score = 293 bits (750), Expect = 6e-77, Method: Composition-based stats.
Identities = 109/375 (29%), Positives = 153/375 (40%), Gaps = 30/375 (8%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP YTT++ A L R+ F D + D + Q+ R AL W
Sbjct: 29 NKPAYTTDQAAKQLSRENL---RFHDRNDDSTVDVHYTVDNS-FTQPQQQRVRQALQSWQ 84
Query: 64 KVVDLTFEETSIHSDIKFISSNN-----GYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
V ++ F E S SD NN G +P G+
Sbjct: 85 DVANINFREQSGDSDGTLNVRNNPRSDRGVATSPN--RTTPHTTATLGTQGGNSSAALGS 142
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-MMDASF 177
S A+HEIGHA+GL HPG YNGG P Y Y D+ +VMSYF ++ D
Sbjct: 143 HFSLTAIHEIGHAIGLHHPGDYNGGNPNYQTGATYAGDTHARTVMSYFSEKNQKGHDFKN 202
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIEVQQKDSPF---------IQTIYDSGG 227
+ PM+ DI A Q++YGA + + Y + F + ++D GG
Sbjct: 203 QSPSAPMMDDIAAAQRLYGANHQTRNTDTTYGFNSNTEREAFSLKSATDKPVFCVWDGGG 262
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D +D + +N IDLN ES+S +GG + N++IA+ IE+ +G +G D + GN A N
Sbjct: 263 IDTMDFSGFAQDQN-IDLNAESFSDVGGLKGNVSIAKGCTIENAMGGAGRDTLSGNDAAN 321
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDFLSDVE 342
G D G G DTF Y S I F + D + +D + V
Sbjct: 322 RLKGGGGADTLRGGGGADTFVYDKASDSTPDQPDMIEDFTSGTDKIDVSGALKD--AGVR 379
Query: 343 RLRFADQCIDSVNVK 357
L F D+
Sbjct: 380 GLVFTDRFTGRAGEA 394
>gi|107100698|ref|ZP_01364616.1| hypothetical protein PaerPA_01001725 [Pseudomonas aeruginosa PACS2]
Length = 472
Score = 293 bits (750), Expect = 6e-77, Method: Composition-based stats.
Identities = 101/408 (24%), Positives = 166/408 (40%), Gaps = 49/408 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------- 52
+ N P YT ++ A+ +LR+Q L+ L+ N +
Sbjct: 25 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 84
Query: 53 -----------EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
A+ +L WS V ++ F + D+ F + + P
Sbjct: 85 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 144
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + G HEIGH LGL HPG YN G
Sbjct: 145 PDALKGQSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYA 202
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 203 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYG 262
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 263 FNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGN 321
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D++IGN NV +GND+ G G D + A +
Sbjct: 322 VSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGAD--TFV 379
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A A + +DF+S +++ D V +L+Y +
Sbjct: 380 YGDIAESSAAAPDTLRDFVSGQDKI---DLSGLDAFVNGGLVLQYVDA 424
>gi|218892777|ref|YP_002441646.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
LESB58]
gi|62467844|gb|AAX84042.1| alkaline protease [Pseudomonas aeruginosa]
gi|218773005|emb|CAW28817.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
LESB58]
Length = 479
Score = 293 bits (750), Expect = 6e-77, Method: Composition-based stats.
Identities = 100/408 (24%), Positives = 166/408 (40%), Gaps = 49/408 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------- 52
+ N P YT ++ A+ +LR+Q L+ L+ N +
Sbjct: 32 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 91
Query: 53 -----------EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
A+ +L W+ V ++ F + D+ F + + P
Sbjct: 92 GKFSAFSAQQQAQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 151
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + G HEIGH LGL HPG YN G
Sbjct: 152 PDALKGQSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYA 209
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 210 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYG 269
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 270 FNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGN 328
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D++IGN NV +GND+ G G D + A +
Sbjct: 329 VSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGAD--TFV 386
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A A + +DF+S +++ D V +L+Y +
Sbjct: 387 YGDIAESSAAAPDTLRDFVSGQDKI---DLSGLDAFVNGGLVLQYVDA 431
>gi|116049201|ref|YP_791996.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|313106233|ref|ZP_07792483.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 39016]
gi|115584422|gb|ABJ10437.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310878985|gb|EFQ37579.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 39016]
Length = 479
Score = 293 bits (749), Expect = 8e-77, Method: Composition-based stats.
Identities = 100/408 (24%), Positives = 166/408 (40%), Gaps = 49/408 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------- 52
+ N P YT ++ A+ +LR+Q L+ L+ N +
Sbjct: 32 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 91
Query: 53 -----------EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
A+ +L W+ V ++ F + D+ F + + P
Sbjct: 92 GKFSAFSAQQQAQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 151
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + G HEIGH LGL HPG YN G
Sbjct: 152 PDALKGQSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYA 209
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 210 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYG 269
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 270 FNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGN 328
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D++IGN NV +GND+ G G D + A +
Sbjct: 329 VSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGAD--TFV 386
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A A + +DF+S +++ D V +L+Y +
Sbjct: 387 YGDIAESSAAAPDTLRDFVSGQDKI---DLSGLDAFVNGGLVLQYVDA 431
>gi|296390372|ref|ZP_06879847.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAb1]
Length = 472
Score = 293 bits (749), Expect = 9e-77, Method: Composition-based stats.
Identities = 100/408 (24%), Positives = 166/408 (40%), Gaps = 49/408 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------- 52
+ N P YT ++ A+ +LR+Q L+ L+ N +
Sbjct: 25 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 84
Query: 53 -----------EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
A+ +L W+ V ++ F + D+ F + + P
Sbjct: 85 GKFSAFSAQQQAQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 144
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + G HEIGH LGL HPG YN G
Sbjct: 145 PDALKGQSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYA 202
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 203 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYG 262
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 263 FNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGN 321
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D++IGN NV +GND+ G G D + A +
Sbjct: 322 VSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGAD--TFV 379
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A A + +DF+S +++ D V +L+Y +
Sbjct: 380 YGDIAESSAAAPDTLRDFVSGQDKI---DLSGLDAFVNGGLVLQYVDA 424
>gi|15825671|pdb|1JIW|P Chain P, Crystal Structure Of The Apr-Aprin Complex
gi|157829926|pdb|1AKL|A Chain A, Alkaline Protease From Pseudomonas Aeruginosa Ifo3080
Length = 470
Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats.
Identities = 101/408 (24%), Positives = 167/408 (40%), Gaps = 49/408 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------- 52
+ N P YT ++ A+ +LR+Q L+ L+ N +
Sbjct: 23 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 82
Query: 53 -----------EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
A+ +L WS V ++ F + D+ F + + P
Sbjct: 83 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDV 142
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + G HEIGH LGL HPG YN G
Sbjct: 143 PDALKGQSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYA 200
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA + G+ +Y
Sbjct: 201 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYG 260
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 261 FNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGN 319
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D++IGN NV +GND+ G G D + A +
Sbjct: 320 VSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGAD--TFV 377
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A A + +DF+S +++ D V +L+Y +
Sbjct: 378 YGDIAESSAAAPDTLRDFVSGQDKI---DLSGLDAFVNGGLVLQYVDA 422
>gi|289677888|ref|ZP_06498778.1| serralysin [Pseudomonas syringae pv. syringae FF5]
Length = 691
Score = 292 bits (746), Expect = 2e-76, Method: Composition-based stats.
Identities = 125/411 (30%), Positives = 195/411 (47%), Gaps = 38/411 (9%)
Query: 9 TTERIADHLLRDQYWSNYF--IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
T ++ A++L + YW + + ++ DV L+ ++ L+ +AQ VAR+AL W+ V
Sbjct: 36 TLDQQANYLT-NGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVVARYALQTWTNVS 94
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
L F ET+ + I F +G Y + + + A W + G +H
Sbjct: 95 GLNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIH 151
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMV 185
EIGHALGL H G+YNG + + Y+ DS+ SVMSYF +++ +ASFGY ATPM+
Sbjct: 152 EIGHALGLGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPML 210
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF------IQTIYDSGGDDLLDLTLIGGV 239
+DIVA+Q +YG G+N Y ++ + TIYDSGG+D ++++ G
Sbjct: 211 ADIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGA 270
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++N ++GND
Sbjct: 271 -QTVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQ 329
Query: 300 GSSGLDTFFYYAPSY----------------------LYKIYRFENAII-VYDANEHKQD 336
G G D A S Y NA + V+DA D
Sbjct: 330 GGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNATLSVHDAQTSDVD 389
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
LS VERL F+D+ + Y A + + + H
Sbjct: 390 TLSSVERLSFSDRNASLDELLMAFHSRYGAFNAESDATVSLSFSTDLHHIA 440
>gi|330981485|gb|EGH79588.1| serralysin [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 785
Score = 292 bits (746), Expect = 2e-76, Method: Composition-based stats.
Identities = 125/411 (30%), Positives = 195/411 (47%), Gaps = 38/411 (9%)
Query: 9 TTERIADHLLRDQYWSNYF--IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
T ++ A++L + YW + + ++ DV L+ ++ L+ +AQ VAR+AL W+ V
Sbjct: 36 TLDQQANYLT-NGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVVARYALQTWTNVS 94
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
L F ET+ + I F +G Y + + + A W + G +H
Sbjct: 95 GLNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIH 151
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMV 185
EIGHALGL H G+YNG + + Y+ DS+ SVMSYF +++ +ASFGY ATPM+
Sbjct: 152 EIGHALGLGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPML 210
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF------IQTIYDSGGDDLLDLTLIGGV 239
+DIVA+Q +YG G+N Y ++ + TIYDSGG+D ++++ G
Sbjct: 211 ADIVAIQSLYGPAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGA 270
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++N ++GND
Sbjct: 271 -QTVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQ 329
Query: 300 GSSGLDTFFYYAPSY----------------------LYKIYRFENAII-VYDANEHKQD 336
G G D A S Y NA + V+DA D
Sbjct: 330 GGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNATLSVHDAQTSDVD 389
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
LS VERL F+D+ + Y A + + + H
Sbjct: 390 TLSSVERLSFSDRNASLDELLMAFHSRYGAFNAESDATVSLSFSTDLHHIA 440
>gi|295690966|ref|YP_003594659.1| serralysin [Caulobacter segnis ATCC 21756]
gi|295432869|gb|ADG12041.1| Serralysin [Caulobacter segnis ATCC 21756]
Length = 662
Score = 291 bits (744), Expect = 3e-76, Method: Composition-based stats.
Identities = 104/431 (24%), Positives = 159/431 (36%), Gaps = 42/431 (9%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS--------FDITELNPNAQ 52
M K T + A LLR + ++ ++ V +R S + +
Sbjct: 34 MVAGKTSLTIPQAASQLLRGEPGWSFQLQQAATVSYAYRASASTMPNDTGGFSTFSAAQI 93
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR-------YFMEINF- 104
AL WS V ++F + SN + Y S F N+
Sbjct: 94 AQTEKALAAWSDVARISFVRVGEGTSGSAAYSNEAAILFGNYSSGEDGAAAFAFYPGNYA 153
Query: 105 ---DKADVW-------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV---YGVDN 151
DVW +HE+GHA+GL HPG Y+ Y +
Sbjct: 154 TSNRSGDVWINSTLSYNANPTGTNYGGMVLIHELGHAIGLAHPGDYDADANTTLTYAANA 213
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
Y DS +VMSYF ++ S Y ++P++ DI A Q YGA + G+ +Y
Sbjct: 214 GYYEDSRQYTVMSYFSESNTGGSFSGAYASSPLLDDIAAAQLAYGANMSTRTGDTVYGFN 273
Query: 211 ---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ I ++D+GG D LD + V IDL +SS+GG N++
Sbjct: 274 SNAGRDWFSATSTSTRLIFAVWDAGGTDTLDFSGY-RVAQTIDLRAGYFSSVGGLTGNVS 332
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-- 319
IA IE+ +G + D++ GNSA N GND DG G DT + Y I
Sbjct: 333 IAIGATIENALGGTAADIINGNSAANRIVGGQGNDTLDGGQGADTAVFSGKVASYAITPL 392
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ +A D + ++E L FAD + V+ + + + + L
Sbjct: 393 STGGWQVKDNAGTDGTDVVVNIESLVFADGAVSLVDSRVATAMGGLLRLKPLSAGAETLA 452
Query: 380 FESMKHFYEFG 390
G
Sbjct: 453 KSLAADMAAGG 463
>gi|302384379|ref|YP_003820202.1| serralysin [Brevundimonas subvibrioides ATCC 15264]
gi|302195007|gb|ADL02579.1| Serralysin [Brevundimonas subvibrioides ATCC 15264]
Length = 1576
Score = 290 bits (742), Expect = 5e-76, Method: Composition-based stats.
Identities = 101/403 (25%), Positives = 146/403 (36%), Gaps = 40/403 (9%)
Query: 4 IKPVYTTERIADHLLR---------DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEV 54
KP T A L R + + T + ++
Sbjct: 81 GKPSLTLTDAAGQLTRTGLSWAPSLGTATTVTYAFRSTAPTTMPTDTAGFSQFTTAQVSA 140
Query: 55 ARWALGEWSKVVDLTFEETSIHS----DIKFISSNNGYVCTPRYDSRYFM---EINFDKA 107
AL WS V ++TF + + N Y
Sbjct: 141 TLLALQAWSDVANITFTRVDDGGGYSNNATMLFGNYSSGEEGAGAFAYQPGNRSTTSVTG 200
Query: 108 DVWRYGIGKGT-------ILSHNALHEIGHALGLMHPGSYNGGYP---VYGVDNDYENDS 157
DVW H HE+GHA+GL HP +YN YG D Y DS
Sbjct: 201 DVWVNASLTSNSSLTLLAYGQHTLTHEVGHAIGLSHPAAYNASEGVSITYGNDATYYEDS 260
Query: 158 FLTSVMSYFMPQDSMMDASFG---YCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ 213
+VMSYF ++ + G Y A P++ DI A Q++YGA + G+ Y
Sbjct: 261 RQYTVMSYFSESNTGANFRRGNAQYSAVPLLDDIAAAQRLYGANMSTRTGDTTYGFNSTA 320
Query: 214 KDSPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ F I I+D+GG D LD + IDL ++S++GG N+ IA
Sbjct: 321 DRAWFSATSSSSSLIFAIWDAGGIDTLDFSGFN-QSQVIDLRQGAFSNVGGLIGNVAIAA 379
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ +G SGND + GNSANN G+D DG G+DT + Y +
Sbjct: 380 GAAIENAIGGSGNDTIYGNSANNRIDGGGGSDTIDGGLGVDTVVFGGARSAYSVSWNGQV 439
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
V + + +VE L F D I + ++ +
Sbjct: 440 GSVLTIGTGQTTTVRNVEFLAFTDMAIATSPTGGVTVYGDLTN 482
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 28/235 (11%)
Query: 195 YGAPKGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Y + G+ GN++ Y + GDD +++ + N + E +
Sbjct: 1165 YDSLYGNGGNDVLFGYGGIDVLVGGDGADIMVGGDGDDTYEVSEV--ADNIQEGAGEGFD 1222
Query: 252 SIGGYEKNMTIAQHTV-------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
++ Y T+A +T + G++G++ ++GN +N+ +GND F G +G
Sbjct: 1223 TVFAYASGYTLAANTESLRLVGSATTGYGNAGDNTLVGNGLDNLLVGGAGNDTFYGGTGD 1282
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT Y + I + ++VE LR +++ +++
Sbjct: 1283 DT--YEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVENLRLVGTAVNATGNALNNMIVG 1340
Query: 365 TASYEDLIQVIGQDVF-----------ESMKHFYEFGLSEGRDITFDSYLYLGSY 408
LI G D+ EG D + Y+ +Y
Sbjct: 1341 NDGNNVLIGGAGNDIMVGSLGNDAYEVTEAGDVVYEAAGEGTDTVYS---YIDTY 1392
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 49/173 (28%), Gaps = 20/173 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-------- 320
E + G+ G D + GN N+V F G DV G G D Y++
Sbjct: 1157 EVLNGADGYDSLYGNGGNDVLFGYGGIDVLVGGDGADIMVGGDGDDTYEVSEVADNIQEG 1216
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCI---------DSVNVKQRSILEYTASYEDL 371
A ++ E LR V ++L A +
Sbjct: 1217 AGEGFDTVFAYASGYTLAANTESLRLVGSATTGYGNAGDNTLVGNGLDNLLVGGAGNDTF 1276
Query: 372 IQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGA 421
G D EG D F Y LG+ + + G+ A
Sbjct: 1277 YGGTGDDTYEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVENLRLVGTAVNA 1329
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 18/170 (10%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ DS TI +G + + + L T S Y ++
Sbjct: 718 NDDGATSGDAGNATDSALTFTIPANG----IYYVQVSEWVSNGPLTTRDIPSGQTYTLHV 773
Query: 261 TIAQHTVIESVVGSS------GNDVVI-------GNSANNVFFESSGNDVFDGSSGLDTF 307
++ H V+ V + G+D GN F S+ +D DG +G+DT
Sbjct: 774 SVPGHAVVPIVNTGASMFGEDGDDSFHQGILYVAGNITATSVFGSA-SDRIDGGAGVDTV 832
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+Y + S+ + + + V + N + D L++VE ++F D + V
Sbjct: 833 YYNSYSFPFTVTTSDGVTTVRNNNTGETDTLTNVEFIQFIDMTVQLGQVA 882
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 41/193 (21%)
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSP 217
SV S+ S++ G T + +A + A + G +Y +
Sbjct: 431 YSV-SWNGQVGSVLTIGTGQTTTVRNVEFLAFTDMAIATSPTGGVTVYGDLTNDSVNGTN 489
Query: 218 FIQTIYDSGGDDLLDLTL----------------------IGGVKNYIDLNTESWSSIGG 255
F TI GG+D ++ + G + L+ + +
Sbjct: 490 FADTITSGGGNDTVNGLDGNDLLDGGLGDDVLSGGLGSDVLTGGRGNDQLDGGAGVDVAD 549
Query: 256 YEK-----NMTIAQH-----------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
Y ++++A IE ++GS+ D +IG+ +N + G D
Sbjct: 550 YRAAGSGVSVSLATGLATGGAGNDTLAGIEDLLGSAYADTLIGDGGDNALSGNGGVDTLY 609
Query: 300 GSSGLDTFFYYAP 312
G G D F+
Sbjct: 610 GGGGNDRFYGSVG 622
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 66/241 (27%), Gaps = 48/241 (19%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDL---------LDLTLI 236
I A I A GS + IY + TI G D ++
Sbjct: 377 IAAGAAIENAIGGSGNDTIYGNSANNRIDGGGGSDTIDGGLGVDTVVFGGARSAYSVSWN 436
Query: 237 GGVKNYIDLNTESWSSIGGY--------------EKNMTIAQHTVIESVVGSSGNDVVIG 282
G V + + + T +++ +T+ +SV G++ D +
Sbjct: 437 GQVGSVLTIGTGQTTTVRNVEFLAFTDMAIATSPTGGVTVYGDLTNDSVNGTNFADTITS 496
Query: 283 NSANNVF------------------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
N+ G+DV G G D A + +
Sbjct: 497 GGGNDTVNGLDGNDLLDGGLGDDVLSGGLGSDVLTGGRGNDQLDGGAGVDVADYRAAGSG 556
Query: 325 IIVYDA-----NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ V A D L+ +E L + + + L + L G D
Sbjct: 557 VSVSLATGLATGGAGNDTLAGIEDLLGSAYADTLIGDGGDNALSGNGGVDTLYGGGGNDR 616
Query: 380 F 380
F
Sbjct: 617 F 617
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 71/262 (27%), Gaps = 24/262 (9%)
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
D SF + +I A ++G+ + V F T+ S G +
Sbjct: 795 GDDSFHQGILYVAGNITATS-VFGSASDRIDGGAGVDTVYYNSYSFPFTVTTSDGVTTVR 853
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMT-IAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
G ++ + + + I+ E++ G+ D + G N+
Sbjct: 854 NNNTGETDTLTNVEFIQFIDMTVQLGQVAPISGTAAGETLNGTQFGDTIYGLGGNDTLNG 913
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ--------DFLSDVER 343
GND G G D Y++ + + ++VE
Sbjct: 914 FGGNDTLIGGGGDDVLVGSLGDDAYEVTEAGDVVTEQAGEGSDTVYSYLDSYTLAANVET 973
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-----------ESMKHFYEFGLS 392
L + + L A L+ G D
Sbjct: 974 LALVGSARAGIGNAGNNTLIGNAGANLLVGGAGVDRMVGGQGDDFYEVTEAGDVVVEAAG 1033
Query: 393 EGRDITFDSYLYLGSYDDLRNV 414
EG D + YL +Y NV
Sbjct: 1034 EGTDTVYS---YLETYTASANV 1052
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
GS+GND ++GN NN+ ++GND+ G +G+D F++ A +I F +I
Sbjct: 1412 GSAGNDTIVGNGLNNILNGNAGNDILTGGAGVDQFWHLAGGGHDRITDFFPSI 1464
Score = 37.0 bits (84), Expect = 9.6, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 7/181 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLN-TESWSSIGGYE 257
G G++ Y EV + ++ G D + N +L + + G
Sbjct: 1278 GGTGDDTY--EVTEAGDVVVEA--AGEGIDTIFSYVTYTLGANVENLRLVGTAVNATGNA 1333
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N I + ++G +GND+++G+ N+ + + DV ++G T Y+ Y+
Sbjct: 1334 LNNMIVGNDGNNVLIGGAGNDIMVGSLGNDAYEVTEAGDVVYEAAGEGTDTVYSYIDTYQ 1393
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ A+ + + + + + IL A + + G
Sbjct: 1394 MSLNVEALYLVGSGRVGLGSAGN-DTIVGNGLNNILNGNAGNDILTGGAGVDQFWHLAGG 1452
Query: 378 D 378
Sbjct: 1453 G 1453
>gi|290473566|ref|YP_003466436.1| Secreted alkaline metalloproteinase [Xenorhabdus bovienii SS-2004]
gi|289172869|emb|CBJ79640.1| Secreted alkaline metalloproteinase [Xenorhabdus bovienii SS-2004]
Length = 476
Score = 290 bits (741), Expect = 7e-76, Method: Composition-based stats.
Identities = 109/431 (25%), Positives = 188/431 (43%), Gaps = 62/431 (14%)
Query: 11 ERIADHLLRDQY-WSN------------YFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
+ D L+R Y W+N +F+ P V+ ++ + N +E A
Sbjct: 45 NKAPDELVRTNYHWTNKVGSSGAVELSYHFLESAPSVMPRFGIA-GFSSFNDEQKEAALL 103
Query: 58 ALGEWSKVVDLTFEETSI--HSDIKFIS------SNNGYVCTPRYDSRYFMEINFDKADV 109
+L WS V ++ F E S ++I F + + P+ + + + +
Sbjct: 104 SLQSWSDVANVKFNEVSSLSKANITFGFFDYSITDDYAFATLPKGQNTTYSWYSAESRTF 163
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYF 166
IG HEIGH LGL HP Y+ P Y +Y DS +VMSYF
Sbjct: 164 IDNDIGVNGYGRQTFTHEIGHTLGLDHPAEYDASDAVRPTYISVGEYFEDSRAYTVMSYF 223
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIE---------VQQKDS 216
+ + D + + P+++DI A+Q++YGA G+ +Y S
Sbjct: 224 SEKYTGQDYKGAFSSAPLLNDISAIQQLYGANTETRTGDTVYGFNSNTDRDFMTATNAKS 283
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ +++D+ G+D D + I+LN ++S +GG + N++IA+ IE+ +G SG
Sbjct: 284 KLVFSVWDADGNDTFDFSGFT-QNQRINLNEGAFSDVGGLKGNVSIARGVTIENAIGGSG 342
Query: 277 NDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFY--------YAPSYLYKIY 319
+D+++GNSA+NV G+D+ G +G DTF Y P +++
Sbjct: 343 DDILVGNSADNVLKGGDGDDIIYGGLGGDDLWGGAGKDTFVYLNGKESLKGNPDWIHDFI 402
Query: 320 RFENAIIVYDANEHKQDFLSDV--------ERLRFADQCIDSVNVKQRSILEYTASYEDL 371
E+ I + D N + + V E L D+ D ++ S+ AS++ L
Sbjct: 403 SGEDKIDLSDFNFGGKGDIKFVDSFSGRAGEVLLTYDKVTDITDM-SISLGGDLASHDFL 461
Query: 372 IQVIGQDVFES 382
+++IGQ V E+
Sbjct: 462 VKIIGQPVAEA 472
>gi|829594|gb|AAA86729.1| metalloprotease [Proteus mirabilis]
Length = 495
Score = 289 bits (740), Expect = 8e-76, Method: Composition-based stats.
Identities = 99/396 (25%), Positives = 169/396 (42%), Gaps = 59/396 (14%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSF----------DITELNPNAQEV 54
P + + H+ R D W+ ++ +P +T + + E N +E
Sbjct: 38 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 97
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFIS------SNNGYVCTPRY--- 94
AR +L WS + ++ F E ++ +DI F + + Y P
Sbjct: 98 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 157
Query: 95 -----DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG- 148
+F + ++ G +HEIGH LGLMHPG YN G V G
Sbjct: 158 GKDLSGQAWFSDYHYAG----NTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGY 213
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIY 207
+ +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+++Y
Sbjct: 214 LKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVY 273
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I +++DSGG+D D + IDL ++S +GG +K
Sbjct: 274 GFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGF-YQDQLIDLRAGNFSDVGGLQK 332
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------A 311
N++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 333 NVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIYGGRGQDTLHG 392
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ E A + A + DF + ++++ +
Sbjct: 393 GTGSNTFIYKEIADSLVTAADKIMDFKTGIDKIDLS 428
>gi|66047210|ref|YP_237051.1| serralysin [Pseudomonas syringae pv. syringae B728a]
gi|63257917|gb|AAY39013.1| Serralysin [Pseudomonas syringae pv. syringae B728a]
Length = 785
Score = 289 bits (739), Expect = 1e-75, Method: Composition-based stats.
Identities = 123/411 (29%), Positives = 192/411 (46%), Gaps = 38/411 (9%)
Query: 9 TTERIADHLLRDQYWSNYF--IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
T ++ A +L D YW + + ++ DV L+ ++ L+ +AQ VAR+AL W+ V
Sbjct: 36 TLDQQAYYLT-DGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVVARYALQTWTNVS 94
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
L F ET+ + I F +G Y + + + A W + G +H
Sbjct: 95 GLNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIH 151
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMV 185
EIGHALGL H G+YNG + + Y+ DS+ SVMSYF +++ ASFGY ATPM+
Sbjct: 152 EIGHALGLGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTYSSASFGYVATPML 210
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF------IQTIYDSGGDDLLDLTLIGGV 239
+DIVA+Q +YG G+N Y ++ + TIYDSGG+D ++++ G
Sbjct: 211 ADIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGA 270
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++N ++GND
Sbjct: 271 -QTVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQ 329
Query: 300 GSSGLDTFFYYAPSYL-----------------------YKIYRFENAIIVYDANEHKQD 336
G G D A S + + V+DA D
Sbjct: 330 GGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNGTLSVHDAQTSDVD 389
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
LS VERL F+D+ + + Y A + + + H
Sbjct: 390 TLSSVERLSFSDRNANLDELLMAFHSRYGAFNAESDATVSLSFSTDLHHIA 440
>gi|30410775|gb|AAC38255.2| alkaline protease [Pseudomonas fluorescens]
Length = 477
Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats.
Identities = 104/428 (24%), Positives = 171/428 (39%), Gaps = 41/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQE------- 53
N KP YT ++ A LLRD + ++ K D+ T S + +N +
Sbjct: 37 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNA 96
Query: 54 ----VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
A A+ WS V ++TF E + D N + P + Y
Sbjct: 97 QQKAQAALAMQSWSDVANVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH+LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGEGAPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 217 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+LN S+S +GG N++IA+
Sbjct: 277 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNEASFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E+ G +GND++IGN+A NV +GND+ G G D + A + ++
Sbjct: 336 GVTVENAFGGAGNDLIIGNNAANVIKGGAGNDLIYGGGGADQLWGGAGKDTFVFGASSDS 395
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + DF S +++ + + + + A G ++
Sbjct: 396 --KPGAADKIFDFTSGSDKIDLSGITKGA-GLTFVNAFTGHAGDAVFSYAAGTNLGTLAV 452
Query: 385 HFYEFGLS 392
F G++
Sbjct: 453 DFSGHGVA 460
>gi|1731424|sp|Q11137|ZAPA_PROMI RecName: Full=Extracellular metalloprotease; Flags: Precursor
Length = 491
Score = 288 bits (738), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/396 (25%), Positives = 169/396 (42%), Gaps = 59/396 (14%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSF----------DITELNPNAQEV 54
P + + H+ R D W+ ++ +P +T + + E N +E
Sbjct: 34 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 93
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFIS------SNNGYVCTPRY--- 94
AR +L WS + ++ F E ++ +DI F + + Y P
Sbjct: 94 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 153
Query: 95 -----DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG- 148
+F + ++ G +HEIGH LGLMHPG YN G V G
Sbjct: 154 GKDLSGQAWFSDYHYAG----NTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGY 209
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIY 207
+ +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+++Y
Sbjct: 210 LKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVY 269
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I +++DSGG+D D + IDL ++S +GG +K
Sbjct: 270 GFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGF-YQDQLIDLRAGNFSDVGGLQK 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------A 311
N++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 329 NVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIYGGRGQDTLHG 388
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ E A + A + DF + ++++ +
Sbjct: 389 GTGSNTFIYKEIADSLVTAADKIMDFKTGIDKIDLS 424
>gi|197284187|ref|YP_002150059.1| metalloprotease [Proteus mirabilis HI4320]
gi|227357937|ref|ZP_03842280.1| serralysin [Proteus mirabilis ATCC 29906]
gi|194681674|emb|CAR40753.1| metalloprotease [Proteus mirabilis HI4320]
gi|227161846|gb|EEI46875.1| serralysin [Proteus mirabilis ATCC 29906]
Length = 491
Score = 288 bits (738), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/396 (25%), Positives = 169/396 (42%), Gaps = 59/396 (14%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSF----------DITELNPNAQEV 54
P + + H+ R D W+ ++ +P +T + + E N +E
Sbjct: 34 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 93
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFIS------SNNGYVCTPRY--- 94
AR +L WS + ++ F E ++ +DI F + + Y P
Sbjct: 94 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 153
Query: 95 -----DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG- 148
+F + ++ G +HEIGH LGLMHPG YN G V G
Sbjct: 154 GKDLSGQAWFSDYHYAG----NTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGY 209
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIY 207
+ +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+++Y
Sbjct: 210 LKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVY 269
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I +++DSGG+D D + IDL ++S +GG +K
Sbjct: 270 GFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGF-YQDQLIDLRAGNFSDVGGLQK 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------A 311
N++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 329 NVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIYGGRGQDTLHG 388
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ E A + A + DF + ++++ +
Sbjct: 389 GTGSNTFIYKEIADSLVSAADKIMDFKTGIDKIDLS 424
>gi|3493596|gb|AAC33449.1| ZapA [Proteus mirabilis]
Length = 491
Score = 288 bits (738), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/396 (25%), Positives = 169/396 (42%), Gaps = 59/396 (14%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSF----------DITELNPNAQEV 54
P + + H+ R D W+ ++ +P +T + + E N +E
Sbjct: 34 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 93
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFIS------SNNGYVCTPRY--- 94
AR +L WS + ++ F E ++ +DI F + + Y P
Sbjct: 94 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 153
Query: 95 -----DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG- 148
+F + ++ G +HEIGH LGLMHPG YN G V G
Sbjct: 154 GKDLSGQAWFSDYHYAG----NTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGY 209
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIY 207
+ +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+++Y
Sbjct: 210 LKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVY 269
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I +++DSGG+D D + IDL ++S +GG +K
Sbjct: 270 GFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGF-HQDQLIDLRAGNFSDVGGLQK 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------A 311
N++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 329 NVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIYGGRGQDTLHG 388
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ E A + A + DF + ++++ +
Sbjct: 389 GTGSNTFIYKEIADSLVTAADKIMDFKTGIDKIDLS 424
>gi|238791578|ref|ZP_04635216.1| Serralysin [Yersinia intermedia ATCC 29909]
gi|238729194|gb|EEQ20710.1| Serralysin [Yersinia intermedia ATCC 29909]
Length = 485
Score = 288 bits (737), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/402 (24%), Positives = 159/402 (39%), Gaps = 40/402 (9%)
Query: 3 NIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSF---------DITELNPNAQ 52
+ K + + A L R + W+ L L + NP
Sbjct: 43 SGKVSFDLGKSALQLNRSELNWNGKTTLGHDVDLNYSFLDLQSQKSNDVHGFIKFNPEQV 102
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN----------GYVCTPRYDSRYFMEI 102
+++L WS V ++ F E N G T +
Sbjct: 103 TQTKFSLQSWSDVANIHFTEVGPTEKANITLGNYSLTADGQLAGGQAYTSSSYTSGPNGR 162
Query: 103 NFDKADVWRYG------IGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYEN 155
D + + Y K HE+GHALGL HP +YN G + D Y
Sbjct: 163 IADTSTWYNYNMDNIREPEKMEYGRLTLAHELGHALGLSHPANYNAGQGNTFAKDAVYGE 222
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQK 214
D+ S+MSY+ S D Y +TP+V DI A+Q++YGA +NIY +
Sbjct: 223 DTRQFSIMSYWDAWQSGADHQGHYASTPLVDDIFAIQRLYGANMDTRTEDNIYGFNSNTQ 282
Query: 215 DSPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
F + +++D+GG D D + V I+L ++S +GG + N++IA +
Sbjct: 283 RDSFTLTDSSDQKVFSVWDAGGIDTFDFSGYS-VDQRINLEEAAFSDVGGLKANVSIAAN 341
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +G SGNDV++GN A+N +GNDV G G D + + S ++ R ++
Sbjct: 342 VTIENAIGGSGNDVLVGNGADNELHGGAGNDVLFGGGGADKLWGGSGSDIFVFGRTTDSS 401
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + DF ++++ + S + +A
Sbjct: 402 --PSAPDWIMDFEGGIDKIDLSVFNTGSGGIHFVDHFSGSAG 441
>gi|77459585|ref|YP_349092.1| epralysin. metallo peptidase. MEROPS family M10B [Pseudomonas
fluorescens Pf0-1]
gi|77383588|gb|ABA75101.1| putative metalloprotease [Pseudomonas fluorescens Pf0-1]
Length = 468
Score = 287 bits (735), Expect = 4e-75, Method: Composition-based stats.
Identities = 106/412 (25%), Positives = 165/412 (40%), Gaps = 59/412 (14%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP +T ++ AD +LR W + K D+ T + +E +
Sbjct: 29 VNGKPSFTADQAADEILRKGMSWQDKNADGKIDLTYTFLTDKPSNYNAKLGNFSEFSAQQ 88
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW- 110
+ A ++ WS V +TF E D N V T Y + + W
Sbjct: 89 KAQAVLSMQSWSDVAKVTFTE-GKGGDGHMTFGNYD-VSTGGAAFAYLPQGSSYDGQSWY 146
Query: 111 --------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLT 160
HEIGH LGL HPG+YN G P YG D Y D+
Sbjct: 147 LINDQYQVNKTPDANNYGRQTLTHEIGHTLGLSHPGAYNAGNGNPTYG-DAKYAEDTRGY 205
Query: 161 SVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE----- 210
S+MSY+ ++ + S Y + P++ DIVAVQK+YGA + N +Y
Sbjct: 206 SLMSYWSEANTDQNFSKDGSGAYASAPLMDDIVAVQKLYGANFETRADNTVYGFNSNADR 265
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG+D LD + I+LN S+S +GG N++IA
Sbjct: 266 DFYSATSNTSKVVFSVWDGGGNDTLDFSGFN-QNQKINLNEGSFSDVGGLVGNVSIAHGV 324
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYLYK 317
+E+ +G SG+D++IGN+A N +GND+ G G DTF + A S
Sbjct: 325 TVENAIGGSGSDLLIGNAAANDLIGGAGNDIIYGGGGGDSLWGGEGADTFVFGAASDS-- 382
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A + DF S ++++ + + + + +
Sbjct: 383 ---------TMTAPDWIMDFTSGLDKIDLSGIAGFATGAATLNFVSGFTGHA 425
>gi|730411|sp|Q07162|PRTG_ERWCH RecName: Full=Secreted protease G; Short=ProG; Flags: Precursor
gi|297861|emb|CAA50501.1| protease G [Erwinia chrysanthemi]
Length = 475
Score = 287 bits (734), Expect = 5e-75, Method: Composition-based stats.
Identities = 96/380 (25%), Positives = 155/380 (40%), Gaps = 44/380 (11%)
Query: 5 KPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSF-----------DITELNPNAQ 52
KP YT E+ D + R W+ + K LT L + N
Sbjct: 41 KPSYTLEQARDQITRGNITWNGEKVFGKSAALTYSFLQSVADSDMPDNFKGFVKFNAAQI 100
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG--------------YVCTPRYDSRY 98
+ + AL W+ V ++TF E N +
Sbjct: 101 QQTKLALQSWADVANVTFSEAKDGERATIQFGNYTLTPDGNTDNNSQAFGFYPGNWKWAG 160
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
N+++AD R I + + HEIGH LGL HPG Y+ G D Y D+
Sbjct: 161 SAWFNYNQADNQRPDINE--FGRNTLTHEIGHTLGLYHPGDYDASDGNPGYKDVTYAEDT 218
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI------- 209
S+MSY+ + D + A P DI A+QK+YGA + G+ +Y
Sbjct: 219 RQFSIMSYWNEGYTGGDFHGYHAAAP--HDIAAIQKLYGANMSTRTGDTVYGFHSNSGRD 276
Query: 210 --EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+P I +++D+GG+D D + I L + ++S +GG + ++IA V
Sbjct: 277 FYTATDSKTPLIFSVWDAGGNDTFDFSGYS-ANQRISLISGTFSDVGGLKAMVSIAAGAV 335
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+ +G SG+DV++GN ++N +GNDV G G D A ++ +++ +
Sbjct: 336 IENAIGGSGHDVIVGNLSDNRIDGGAGNDVLYGDGGADILTGGAGKDIFVYAWEKDS--L 393
Query: 328 YDANEHKQDFLSDVERLRFA 347
A + DF +R+ +
Sbjct: 394 SSAPDTITDFQRGEDRIDLS 413
>gi|299818421|gb|ADJ53339.1| metalloprotease zapA [Proteus mirabilis]
Length = 491
Score = 287 bits (733), Expect = 6e-75, Method: Composition-based stats.
Identities = 99/396 (25%), Positives = 168/396 (42%), Gaps = 59/396 (14%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSF----------DITELNPNAQEV 54
P + + H+ R D W+ ++ +P +T + + E N +E
Sbjct: 34 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 93
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFIS------SNNGYVCTPRY--- 94
AR +L WS + ++ F E ++ +DI F + + Y P
Sbjct: 94 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 153
Query: 95 -----DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG- 148
+F + + G +HEIGH LGLMHPG YN G V G
Sbjct: 154 GKDLSGQAWFSDYYYAG----NTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGY 209
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIY 207
+ +DY DS +VMSY+ ++ Y P++ DI A+Q +YGA + G+++Y
Sbjct: 210 LKSDYAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVY 269
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I +++DSGG+D D + IDL ++S +GG +K
Sbjct: 270 GFNSNTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGF-YQDQLIDLRAGNFSDVGGLQK 328
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------A 311
N++IAQ+ IE+ +G GND++ GN A+N G+D+ G SG +T +
Sbjct: 329 NVSIAQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIYGGRGQDTLHG 388
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ E A + A + DF + ++++ +
Sbjct: 389 GTGSNTFIYKEIADSLVTAADKIMDFKTGIDKIDLS 424
>gi|1616941|dbj|BAA13503.1| alkaline proteinase [Pseudomonas aeruginosa]
Length = 476
Score = 285 bits (730), Expect = 1e-74, Method: Composition-based stats.
Identities = 102/441 (23%), Positives = 170/441 (38%), Gaps = 51/441 (11%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------- 52
+ N P YT ++ A+ +LR+Q L+ L+ N +
Sbjct: 32 LVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSL 91
Query: 53 -----------EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRY 94
A+ +L WS V ++ F + D+ F + + P
Sbjct: 92 GKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGHQGDLTFGNFSSSVGGAAFAFLPDV 151
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-V 149
+ + IN + HEIGH LGL P YN G
Sbjct: 152 PDALKGQSWYLINSSYS--ANVNPANANYGRQTLTHEIGHTLGLSTP-DYNAGEGDPTYA 208
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 209 DATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYG 268
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+GG+D LD + I+LN ++ S +GG + N
Sbjct: 269 FNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSRFS-QNQKINLNEKALSDVGGLKGN 327
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++IA +E+ +G SG+D++ GN NV +GND+ G G D + A + +
Sbjct: 328 LSIAAGVTVENAIGGSGSDLLYGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTF--- 384
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + A + +DF+S +++ D V +L+Y ++ Q I
Sbjct: 385 VYAISPSPPRAPDRVRDFVSGQDKI---DLSGLHAFVNGGLVLQYVDAFAGNAQGILSYD 441
Query: 380 FESMKHFYEFGLSEGRDITFD 400
S S R F
Sbjct: 442 AASKAGSLAVDFSGDRHADFA 462
>gi|3135220|dbj|BAA28268.1| metalloprotease [Pseudomonas fluorescens]
Length = 476
Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats.
Identities = 107/428 (25%), Positives = 171/428 (39%), Gaps = 42/428 (9%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQE------- 53
N KP Y+ ++ A LLRD + + K D+ T S + +N +
Sbjct: 37 VNGKPSYSVDQAATQLLRDGAAYRDVDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNA 96
Query: 54 ----VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
A A+ WS V ++TF E + D N + P + Y
Sbjct: 97 QQKAQAALAMQSWSDVANVTFTEKATGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 156
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 157 SWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 216
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE--- 210
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+ Y
Sbjct: 217 GYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDTTYGFNSNT 276
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +++D GG+D LD + I+LN S+S +GG N++IA+
Sbjct: 277 GRDFYSATSNADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNEASFSDVGGLVGNVSIAK 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ G SGND++IGN+A NV +GND+ G G D + A + ++
Sbjct: 336 GVTIEN-FGGSGNDLIIGNNAANVIKGGAGNDIIYGGGGADQLWGGAGND--TFVYGASS 392
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A++ DF S +++ + + + + A L G ++
Sbjct: 393 DSKPGASDKIFDFTSGSDKIDLSGITKGA-GLTFVNAFTGHAGDAVLTYAAGTNLGTLAV 451
Query: 385 HFYEFGLS 392
F G++
Sbjct: 452 DFSGHGVA 459
>gi|77463798|ref|YP_353302.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides 2.4.1]
gi|77388216|gb|ABA79401.1| Neutral zinc metallopeptidase [Rhodobacter sphaeroides 2.4.1]
Length = 531
Score = 280 bits (717), Expect = 4e-73, Method: Composition-based stats.
Identities = 120/392 (30%), Positives = 168/392 (42%), Gaps = 23/392 (5%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + IAD L+ + S + DV L+ +++ L + Q +AR AL W+ V
Sbjct: 45 VASMREIADQLVSGYWRSEGHSIRRFDVEPGDTLNVNLSGLTADGQRLARAALDTWADVT 104
Query: 67 DLTFEETSIHSD---IKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILS 121
L F I NG T ++ N + W YG +
Sbjct: 105 GLKFNTAPRFGATVHIVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLNSYSL 164
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYC 180
+HEIGHALGL H G+YNG Y D + NDS+ SVMSYF ++S +DA +
Sbjct: 165 QTFIHEIGHALGLGHAGNYNGS-ADYASDALFLNDSWQASVMSYFSQTENSYIDADKAFV 223
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI-----------YKIEVQQKDSPFIQTIYDSGGDD 229
TPM++DI+A+Q +YG P G +N Y P TI+D GG D
Sbjct: 224 VTPMIADILAIQTLYGTPGGLRADNTVYGTGSTAGGMYDRAATMTADPVAWTIFDQGGWD 283
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LDL IDL + S I G + N++IA TVIE+ G SGND +IGN NV
Sbjct: 284 RLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGVANVL 342
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-D 348
G+D+ G +G D Y L +I I + ++VE L A
Sbjct: 343 NGGGGSDIMRGGAGNDI---YHSDGLDRIVELPGQGIDRVISTASCTLAANVENLTLAGG 399
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ I +++ A+ L G D F
Sbjct: 400 RSISGTGNGLANVIAGNAAANRLTGGAGADSF 431
>gi|332558673|ref|ZP_08412995.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides WS8N]
gi|332276385|gb|EGJ21700.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides WS8N]
Length = 531
Score = 279 bits (714), Expect = 9e-73, Method: Composition-based stats.
Identities = 119/392 (30%), Positives = 168/392 (42%), Gaps = 23/392 (5%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + IAD L+ + S + DV L+ +++ L + Q +AR AL W+ V
Sbjct: 45 VASMREIADQLVSGYWRSEGHSIRRFDVEPGDTLNVNLSGLTADGQRLARAALDTWADVT 104
Query: 67 DLTFEETSIHSD---IKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILS 121
L F I NG T ++ N + W YG +
Sbjct: 105 GLKFNTAPRFGATVHIVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLNSYSL 164
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYC 180
+HEIGHALGL H G+YNG Y D + NDS+ SVMSYF ++S +DA +
Sbjct: 165 QTFIHEIGHALGLGHAGNYNGS-ADYASDALFLNDSWQASVMSYFSQTENSYIDADKAFV 223
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI-----------YKIEVQQKDSPFIQTIYDSGGDD 229
TPM++DI+A+Q +YG P G ++ Y P TI+D GG D
Sbjct: 224 VTPMIADILAIQTLYGTPGGLRADSTVYGTGSTAGGMYDRAATMTADPVSWTIFDQGGWD 283
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LDL IDL + S I G + N++IA TVIE+ G SGND +IGN NV
Sbjct: 284 RLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGVANVL 342
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-D 348
G+D+ G +G D Y L +I I + ++VE L A
Sbjct: 343 NGGGGSDIMRGGAGNDI---YHSDGLDRIVELPGQGIDRVISTASCTLAANVENLTLAGG 399
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ I +++ A+ L G D F
Sbjct: 400 RAISGTGNGLANVITGNAAANRLTGGAGADSF 431
>gi|126462634|ref|YP_001043748.1| serralysin [Rhodobacter sphaeroides ATCC 17029]
gi|126104298|gb|ABN76976.1| Serralysin [Rhodobacter sphaeroides ATCC 17029]
Length = 531
Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats.
Identities = 119/392 (30%), Positives = 168/392 (42%), Gaps = 23/392 (5%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + IAD L+ + S + DV L+ +++ L + Q +AR AL W+ V
Sbjct: 45 VASMREIADQLVSGYWRSEGHSIRRFDVEPGDTLNVNLSGLTADGQRLARAALDTWADVT 104
Query: 67 DLTFEETSIHSD---IKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILS 121
L F I NG T ++ N + W YG +
Sbjct: 105 GLKFNTAPRFGATVHIVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLNSYSL 164
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYC 180
+HEIGHALGL H G+YNG Y D + NDS+ SVMSYF ++S +DA +
Sbjct: 165 QTFIHEIGHALGLGHAGNYNGS-ADYASDALFLNDSWQASVMSYFSQTENSYIDADKAFV 223
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI-----------YKIEVQQKDSPFIQTIYDSGGDD 229
TPM++DI+A+Q +YG P G ++ Y P TI+D GG D
Sbjct: 224 VTPMIADILAIQTLYGTPGGLRADSTVYGTGSTAGGMYDRAATLTAEPVAWTIFDQGGWD 283
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LDL IDL + S I G + N++IA TVIE+ G SGND +IGN NV
Sbjct: 284 RLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGVANVL 342
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-D 348
G+D+ G +G D Y L +I I + ++VE L A
Sbjct: 343 NGGGGSDIMRGGAGNDI---YHSDGLDRIVELPGQGIDRVISTASCTLAANVENLTLAGG 399
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ I +++ A+ L G D F
Sbjct: 400 RAITGTGNGLANVITGNAAANRLTGGAGADSF 431
>gi|221639650|ref|YP_002525912.1| Serralysin [Rhodobacter sphaeroides KD131]
gi|221160431|gb|ACM01411.1| Serralysin [Rhodobacter sphaeroides KD131]
Length = 531
Score = 278 bits (712), Expect = 2e-72, Method: Composition-based stats.
Identities = 120/392 (30%), Positives = 167/392 (42%), Gaps = 23/392 (5%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + IAD L+ + S + DV L+ +++ L + Q +AR AL W+ V
Sbjct: 45 VASMREIADQLVSGYWRSEGHSIRRFDVEPGDTLNVNLSGLTADGQRLARAALDTWADVT 104
Query: 67 DLTFEETSIHSD---IKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILS 121
L F I NG T ++ N + W YG +
Sbjct: 105 GLKFNTAPRFGATVHIVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLNSYSL 164
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYC 180
+HEIGHALGL H G+YNG Y D + NDS+ SVMSYF ++S +DA +
Sbjct: 165 QTFIHEIGHALGLGHAGNYNGS-ADYASDALFLNDSWQASVMSYFSQTENSYIDADKAFV 223
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI-----------YKIEVQQKDSPFIQTIYDSGGDD 229
TPM++DI+A+Q +YG P G +N Y P TI D GG D
Sbjct: 224 VTPMIADILAIQTLYGTPGGLRADNTVYGTGSTAGGMYDRAATMTADPVAWTILDQGGWD 283
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LDL IDL + S I G + N++IA TVIE+ G SGND +IGN NV
Sbjct: 284 RLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIASGTVIEAARGGSGNDRLIGNGVANVL 342
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-D 348
G+D+ G +G D Y L +I I + ++VE L A
Sbjct: 343 NGGGGSDIMRGGAGNDI---YHSDGLDRIVELPGQGIDRVISTASCILAANVENLTLAGG 399
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ I +++ A+ L G D F
Sbjct: 400 RAISGTGNGLANVITGNAAANRLTGGAGADSF 431
>gi|51598104|ref|YP_072295.1| metalloprotease [Yersinia pseudotuberculosis IP 32953]
gi|51591386|emb|CAH23052.1| metalloprotease [Yersinia pseudotuberculosis IP 32953]
Length = 445
Score = 273 bits (699), Expect = 5e-71, Method: Composition-based stats.
Identities = 100/391 (25%), Positives = 157/391 (40%), Gaps = 54/391 (13%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRL--------------SFDITELNPNAQEVARWA 58
IA + Q W I K LT + ++ NP A+ A
Sbjct: 35 IAPQISSHQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYVSLFNPAQIHQAKIA 94
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ V +++F E S S + N GY P S + IN+ +D
Sbjct: 95 MQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGSFSPIWINYSFSD--N 152
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ HEIGHALGL H + +G + SVMSY QDS
Sbjct: 153 QHPSRLNYGGGVLTHEIGHALGLGHSHAPHGY-------------TQQMSVMSYLSEQDS 199
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ---------KDSPFIQT 221
+ Y +TP + DI A+Q +YGA + G+ +Y I
Sbjct: 200 GANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFC 259
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG+D D + I+LN +S +GG + N++IA IE+ +G SG+D +I
Sbjct: 260 VWDAGGNDTFDFSGY-KQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDII 318
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHK-- 334
GN NN+ + G+D G+ G +TF Y + I+ F++ D ++
Sbjct: 319 GNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPS 378
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + V+RL F Q + + + Y
Sbjct: 379 TDRVIFVDRLSFNGQTEMGQQYNEVADITYL 409
>gi|170022379|ref|YP_001718884.1| serralysin [Yersinia pseudotuberculosis YPIII]
gi|169748913|gb|ACA66431.1| Serralysin [Yersinia pseudotuberculosis YPIII]
Length = 444
Score = 273 bits (698), Expect = 6e-71, Method: Composition-based stats.
Identities = 100/391 (25%), Positives = 157/391 (40%), Gaps = 54/391 (13%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRL--------------SFDITELNPNAQEVARWA 58
IA + Q W I K LT + ++ NP A+ A
Sbjct: 34 IAPQISSHQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYVSLFNPAQIHQAKIA 93
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ V +++F E S S + N GY P S + IN+ +D
Sbjct: 94 MQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNPGSFSPIWINYSFSD--N 151
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ HEIGHALGL H + +G + SVMSY QDS
Sbjct: 152 QHPSRLNYGGGVLTHEIGHALGLGHSHAPHGY-------------TQQMSVMSYLSEQDS 198
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ---------KDSPFIQT 221
+ Y +TP + DI A+Q +YGA + G+ +Y I
Sbjct: 199 GANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFC 258
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG+D D + I+LN +S +GG + N++IA IE+ +G SG+D +I
Sbjct: 259 VWDAGGNDTFDFSGY-KQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDII 317
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHK-- 334
GN NN+ + G+D G+ G +TF Y + I+ F++ D ++
Sbjct: 318 GNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPS 377
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + V+RL F Q + + + Y
Sbjct: 378 TDRVIFVDRLSFNGQTEMGQQYNEVADITYL 408
>gi|186897322|ref|YP_001874434.1| peptidase M10 serralysin [Yersinia pseudotuberculosis PB1/+]
gi|186700348|gb|ACC90977.1| Peptidase M10 serralysin [Yersinia pseudotuberculosis PB1/+]
Length = 444
Score = 273 bits (698), Expect = 6e-71, Method: Composition-based stats.
Identities = 100/391 (25%), Positives = 157/391 (40%), Gaps = 54/391 (13%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRL--------------SFDITELNPNAQEVARWA 58
IA + Q W I K LT + ++ NP A+ A
Sbjct: 34 IAPQISSHQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYVSLFNPAQIHQAKIA 93
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ V +++F E S S + N GY P S + IN+ +D
Sbjct: 94 MQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGSFSPIWINYSFSD--N 151
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ HEIGHALGL H + +G + SVMSY QDS
Sbjct: 152 QHPSRLNYGGGVLTHEIGHALGLGHSHAPHGY-------------TQQMSVMSYLSEQDS 198
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ---------KDSPFIQT 221
+ Y +TP + DI A+Q +YGA + G+ +Y I
Sbjct: 199 GANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFC 258
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG+D D + I+LN +S +GG + N++IA IE+ +G SG+D +I
Sbjct: 259 VWDAGGNDTFDFSGY-KQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDII 317
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHK-- 334
GN NN+ + G+D G+ G +TF Y + I+ F++ D ++
Sbjct: 318 GNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPS 377
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + V+RL F Q + + + Y
Sbjct: 378 TDRVIFVDRLSFNGQTEMGQQYNEVADITYL 408
>gi|153948040|ref|YP_001402983.1| metalloprotease [Yersinia pseudotuberculosis IP 31758]
gi|152959535|gb|ABS46996.1| metalloprotease [Yersinia pseudotuberculosis IP 31758]
Length = 442
Score = 273 bits (698), Expect = 7e-71, Method: Composition-based stats.
Identities = 100/391 (25%), Positives = 157/391 (40%), Gaps = 54/391 (13%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRL--------------SFDITELNPNAQEVARWA 58
IA + Q W I K LT + ++ NP A+ A
Sbjct: 32 IAPQISSHQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYVSLFNPAQIHQAKIA 91
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ V +++F E S S + N GY P S + IN+ +D
Sbjct: 92 MQSWADVANISFTEASADSSANILFLNFQRPGNVAGYAYHPNLGSFSPIWINYSFSD--N 149
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ HEIGHALGL H + +G + SVMSY QDS
Sbjct: 150 QHPSRLNYGGGVLTHEIGHALGLGHSHAPHGY-------------TQQMSVMSYLSEQDS 196
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ---------KDSPFIQT 221
+ Y +TP + DI A+Q +YGA + G+ +Y I
Sbjct: 197 GANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFC 256
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG+D D + I+LN +S +GG + N++IA IE+ +G SG+D +I
Sbjct: 257 VWDAGGNDTFDFSGY-KQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDII 315
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHK-- 334
GN NN+ + G+D G+ G +TF Y + I+ F++ D ++
Sbjct: 316 GNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPS 375
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + V+RL F Q + + + Y
Sbjct: 376 TDRVIFVDRLSFNGQTEMGQQYNEVADITYL 406
>gi|146277440|ref|YP_001167599.1| peptidase M10, serralysin-like protein [Rhodobacter sphaeroides
ATCC 17025]
gi|145555681|gb|ABP70294.1| Peptidase M10, serralysin-like protein [Rhodobacter sphaeroides
ATCC 17025]
Length = 614
Score = 273 bits (697), Expect = 9e-71, Method: Composition-based stats.
Identities = 107/344 (31%), Positives = 155/344 (45%), Gaps = 20/344 (5%)
Query: 6 PVY-TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
P + + ++IA L+ + DV L+ D + L + + +A AL WS
Sbjct: 126 PSFGSVQQIATQLVSGYWQWKGAPARAYDVKPGDTLNVDFSGLTADGKRLATLALQSWSD 185
Query: 65 VVDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTI 119
V + F I G + Y ++ + + W YG +
Sbjct: 186 VTGIRFNTNPARLATVHITMDDVEPGASTSTTYMGSKILKSHVNIGTKWLSDYGTDVNSY 245
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFG 178
+HE+GHALGL HPG+YN G+ YG DN + NDS+ +VMSYF +++ + A
Sbjct: 246 SLQTYIHELGHALGLGHPGNYN-GWANYGTDNLFLNDSWQATVMSYFSQTENTTIKADRA 304
Query: 179 YCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ----------KDSPFIQTIYDSGG 227
+ TPM++DIVAVQ IYG P G GN Y TIYD GG
Sbjct: 305 FVVTPMIADIVAVQMIYGTPSGLRAGNTTYGDNSNAGGMYDRIASLPGREVAWTIYDQGG 364
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D+LDL IDL S S++ G N++IAQ TVIE G GNDV+IGNSA+N
Sbjct: 365 RDILDLRSAT-AAQVIDLRPGSVSNVYGAVGNLSIAQGTVIEVARGGKGNDVIIGNSAHN 423
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+D G +G D + + ++ ++ A+
Sbjct: 424 DLSGGGGSDTLRGGAGNDIYRVDGGDRVIELAGNGIDRVISSAS 467
>gi|22127728|ref|NP_671151.1| metalloprotease [Yersinia pestis KIM 10]
gi|45443084|ref|NP_994623.1| metalloprotease [Yersinia pestis biovar Microtus str. 91001]
gi|150261071|ref|ZP_01917799.1| metalloprotease [Yersinia pestis CA88-4125]
gi|218930968|ref|YP_002348843.1| metalloprotease [Yersinia pestis CO92]
gi|229836449|ref|ZP_04456616.1| metalloprotease [Yersinia pestis Pestoides A]
gi|229839671|ref|ZP_04459830.1| metalloprotease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841754|ref|ZP_04461910.1| metalloprotease [Yersinia pestis biovar Orientalis str. India 195]
gi|229904292|ref|ZP_04519403.1| metalloprotease [Yersinia pestis Nepal516]
gi|21960850|gb|AAM87402.1|AE013989_9 putative secreted metalloprotease [Yersinia pestis KIM 10]
gi|45437951|gb|AAS63500.1| metalloprotease [Yersinia pestis biovar Microtus str. 91001]
gi|115349579|emb|CAL22553.1| metalloprotease [Yersinia pestis CO92]
gi|149290479|gb|EDM40556.1| metalloprotease [Yersinia pestis CA88-4125]
gi|229678410|gb|EEO74515.1| metalloprotease [Yersinia pestis Nepal516]
gi|229691093|gb|EEO83146.1| metalloprotease [Yersinia pestis biovar Orientalis str. India 195]
gi|229696037|gb|EEO86084.1| metalloprotease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229706517|gb|EEO92524.1| metalloprotease [Yersinia pestis Pestoides A]
gi|320017299|gb|ADW00871.1| metalloprotease [Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 445
Score = 271 bits (694), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/391 (25%), Positives = 156/391 (39%), Gaps = 54/391 (13%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRL--------------SFDITELNPNAQEVARWA 58
IA + Q W I K LT + I+ NP A+ A
Sbjct: 35 IAPQISSRQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYISLFNPAQIHQAKIA 94
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ V +++F E S S + N GY P S + IN+ +D
Sbjct: 95 MQSWADVANISFTEASADSSANILFLNFQRPSNVAGYAYYPNPGSFSPIWINYSFSD--N 152
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ HEIGHALGL H + +G + SVMSY Q S
Sbjct: 153 QHPSRLNDGGGVLTHEIGHALGLGHSHAPHGY-------------TQQMSVMSYLSEQGS 199
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ---------KDSPFIQT 221
+ Y +TP + DI A+Q +YGA + G+ +Y I
Sbjct: 200 GANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFC 259
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG+D D + I+LN +S +GG + N++IA IE+ +G SG+D +I
Sbjct: 260 VWDAGGNDTFDFSGY-KQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDII 318
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHK-- 334
GN NN+ + G+D G+ G +TF Y + I+ F++ D ++
Sbjct: 319 GNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPS 378
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + V+RL F Q + + + Y
Sbjct: 379 TDRVIFVDRLSFNGQTEMGQQYNEVADITYL 409
>gi|162419360|ref|YP_001608372.1| metalloprotease [Yersinia pestis Angola]
gi|165926981|ref|ZP_02222813.1| metalloprotease [Yersinia pestis biovar Orientalis str. F1991016]
gi|165936949|ref|ZP_02225515.1| metalloprotease [Yersinia pestis biovar Orientalis str. IP275]
gi|166009505|ref|ZP_02230403.1| metalloprotease [Yersinia pestis biovar Antiqua str. E1979001]
gi|167400502|ref|ZP_02306011.1| metalloprotease [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420863|ref|ZP_02312616.1| metalloprotease [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167426616|ref|ZP_02318369.1| metalloprotease [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167468060|ref|ZP_02332764.1| metalloprotease [Yersinia pestis FV-1]
gi|294504302|ref|YP_003568364.1| metalloprotease [Yersinia pestis Z176003]
gi|162352175|gb|ABX86123.1| metalloprotease [Yersinia pestis Angola]
gi|165915191|gb|EDR33802.1| metalloprotease [Yersinia pestis biovar Orientalis str. IP275]
gi|165921087|gb|EDR38311.1| metalloprotease [Yersinia pestis biovar Orientalis str. F1991016]
gi|165991427|gb|EDR43728.1| metalloprotease [Yersinia pestis biovar Antiqua str. E1979001]
gi|166960992|gb|EDR57013.1| metalloprotease [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167049870|gb|EDR61278.1| metalloprotease [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054391|gb|EDR64207.1| metalloprotease [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|262363677|gb|ACY60398.1| metalloprotease [Yersinia pestis D106004]
gi|294354761|gb|ADE65102.1| metalloprotease [Yersinia pestis Z176003]
Length = 444
Score = 271 bits (692), Expect = 3e-70, Method: Composition-based stats.
Identities = 100/391 (25%), Positives = 156/391 (39%), Gaps = 54/391 (13%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRL--------------SFDITELNPNAQEVARWA 58
IA + Q W I K LT + I+ NP A+ A
Sbjct: 34 IAPQISSRQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYISLFNPAQIHQAKIA 93
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ V +++F E S S + N GY P S + IN+ +D
Sbjct: 94 MQSWADVANISFTEASADSSANILFLNFQRPSNVAGYAYYPNPGSFSPIWINYSFSD--N 151
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ HEIGHALGL H + +G + SVMSY Q S
Sbjct: 152 QHPSRLNDGGGVLTHEIGHALGLGHSHAPHGY-------------TQQMSVMSYLSEQGS 198
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ---------KDSPFIQT 221
+ Y +TP + DI A+Q +YGA + G+ +Y I
Sbjct: 199 GANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFC 258
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG+D D + I+LN +S +GG + N++IA IE+ +G SG+D +I
Sbjct: 259 VWDAGGNDTFDFSGY-KQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDII 317
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHK-- 334
GN NN+ + G+D G+ G +TF Y + I+ F++ D ++
Sbjct: 318 GNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPS 377
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + V+RL F Q + + + Y
Sbjct: 378 TDRVIFVDRLSFNGQTEMGQQYNEVADITYL 408
>gi|108809791|ref|YP_653707.1| metalloprotease [Yersinia pestis Antiqua]
gi|108813781|ref|YP_649548.1| metalloprotease [Yersinia pestis Nepal516]
gi|145600589|ref|YP_001164665.1| metalloprotease [Yersinia pestis Pestoides F]
gi|270488101|ref|ZP_06205175.1| hypothetical protein YPD27_1615 [Yersinia pestis KIM D27]
gi|108777429|gb|ABG19948.1| metalloprotease [Yersinia pestis Nepal516]
gi|108781704|gb|ABG15762.1| metalloprotease [Yersinia pestis Antiqua]
gi|145212285|gb|ABP41692.1| metalloprotease [Yersinia pestis Pestoides F]
gi|262367608|gb|ACY64165.1| metalloprotease [Yersinia pestis D182038]
gi|270336605|gb|EFA47382.1| hypothetical protein YPD27_1615 [Yersinia pestis KIM D27]
Length = 442
Score = 270 bits (691), Expect = 4e-70, Method: Composition-based stats.
Identities = 100/391 (25%), Positives = 156/391 (39%), Gaps = 54/391 (13%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRL--------------SFDITELNPNAQEVARWA 58
IA + Q W I K LT + I+ NP A+ A
Sbjct: 32 IAPQISSRQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYISLFNPAQIHQAKIA 91
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ V +++F E S S + N GY P S + IN+ +D
Sbjct: 92 MQSWADVANISFTEASADSSANILFLNFQRPSNVAGYAYYPNPGSFSPIWINYSFSD--N 149
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ HEIGHALGL H + +G + SVMSY Q S
Sbjct: 150 QHPSRLNDGGGVLTHEIGHALGLGHSHAPHGY-------------TQQMSVMSYLSEQGS 196
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ---------KDSPFIQT 221
+ Y +TP + DI A+Q +YGA + G+ +Y I
Sbjct: 197 GANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFC 256
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG+D D + I+LN +S +GG + N++IA IE+ +G SG+D +I
Sbjct: 257 VWDAGGNDTFDFSGY-KQNQMINLNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDII 315
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHK-- 334
GN NN+ + G+D G+ G +TF Y + I+ F++ D ++
Sbjct: 316 GNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPS 375
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + V+RL F Q + + + Y
Sbjct: 376 TDRVIFVDRLSFNGQTEMGQQYNEVADITYL 406
>gi|166213401|ref|ZP_02239436.1| metalloprotease [Yersinia pestis biovar Antiqua str. B42003004]
gi|166205342|gb|EDR49822.1| metalloprotease [Yersinia pestis biovar Antiqua str. B42003004]
Length = 444
Score = 269 bits (688), Expect = 9e-70, Method: Composition-based stats.
Identities = 99/391 (25%), Positives = 155/391 (39%), Gaps = 54/391 (13%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRL--------------SFDITELNPNAQEVARWA 58
IA + Q W I K LT + I+ NP A+ A
Sbjct: 34 IAPQISSRQSWKENTIHNKNTNLTYSFSRAYTLWDYDRTFQQNAYISLFNPAQIHQAKIA 93
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ V +++F E S S + N GY P S + IN+ +D
Sbjct: 94 MQSWADVANISFTEASADSSANILFLNFQRPSNVAGYAYYPNPGSFSPIWINYSFSD--N 151
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ HEIGHALGL H + +G + SVMSY Q S
Sbjct: 152 QHPSRLNDGGGVLTHEIGHALGLGHSHAPHGY-------------TQQMSVMSYLSEQGS 198
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ---------KDSPFIQT 221
+ Y +TP + DI A+Q +YGA + G+ +Y I
Sbjct: 199 GANYGQHYLSTPQMYDIAAIQYLYGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFC 258
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG+D D + I+LN +S +GG + N++IA IE+ + SG+D +I
Sbjct: 259 VWDAGGNDTFDFSGY-KQNQMINLNELCFSDVGGLKGNVSIAADVTIENAISGSGHDDII 317
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHK-- 334
GN NN+ + G+D G+ G +TF Y + I+ F++ D ++
Sbjct: 318 GNHTNNILTGNGGSDQLWGNGGNNTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPS 377
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + V+RL F Q + + + Y
Sbjct: 378 TDRVIFVDRLSFNGQTEMGQQYNEVADITYL 408
>gi|226328853|ref|ZP_03804371.1| hypothetical protein PROPEN_02754 [Proteus penneri ATCC 35198]
gi|225202039|gb|EEG84393.1| hypothetical protein PROPEN_02754 [Proteus penneri ATCC 35198]
Length = 390
Score = 269 bits (688), Expect = 1e-69, Method: Composition-based stats.
Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 29/367 (7%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNN------GYVCTPR-YDSRYFMEI 102
++ AR +L WS + ++ F E + SDI F + + Y P Y +
Sbjct: 8 KDHARQSLDAWSDIANIKFTEVAPGTKSDITFGNITDPYGQFQAYATLPNTYSYGRDLSG 67
Query: 103 NFDKADVW---RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+D + G +HEIGH LGLMHPG YN G V G + +DY DS
Sbjct: 68 QAWFSDYYYAGNTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGYLKSDYAEDSR 127
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE------- 210
+VMSY+ ++ Y P++ DI A+Q +YGA + G+++Y
Sbjct: 128 QYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVYGFNSNTGIDY 187
Query: 211 --VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I +++DS G+D D + IDL +S +GG +KN++IAQ I
Sbjct: 188 YTATSSNDKLIFSVWDSSGNDTFDFSGF-YQDQIIDLREGHFSDVGGLQKNVSIAQGVTI 246
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++ GN A+N+ GND+ G G D + S E + +
Sbjct: 247 ENAIGGSGNDIIYGNDADNILIGGGGNDILYGGGGQDILWGDTGSN--TFVYKEISDSLA 304
Query: 329 DANEHKQDFLSDVERLRFA---DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S ++++ + + + + + + E +
Sbjct: 305 SAADKIMDFKSGIDKIDLSELIENTFSHKFLNFVDNFTGRSGEATVKYDQSTNSSELAIN 364
Query: 386 FYEFGLS 392
Y +G S
Sbjct: 365 AYGYGYS 371
>gi|259414780|ref|ZP_05738703.1| rb139 [Silicibacter sp. TrichCH4B]
gi|259349231|gb|EEW60978.1| rb139 [Silicibacter sp. TrichCH4B]
Length = 660
Score = 269 bits (687), Expect = 1e-69, Method: Composition-based stats.
Identities = 120/423 (28%), Positives = 179/423 (42%), Gaps = 43/423 (10%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYK-PDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
V + + +AD L D YW F + D ++++ +IT L Q++ARWA W +V
Sbjct: 151 VASLDEMADFLT-DGYWQGTFRSGRNFDTSADNQITVNITGLTAAGQQLARWAFEAWERV 209
Query: 66 VDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSH 122
+L F ET +DI F + +G + + + W YG T
Sbjct: 210 ANLEFVETGTGFADITFDDAASGAYAQSVVSGGTILSSVVNVSTSWLSNYGTDIDTYSFQ 269
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCA 181
+HEIGHALGL H G+YN G YG D + NDS+ SVMSYF ++ +ASFGY
Sbjct: 270 TYVHEIGHALGLGHQGAYN-GNATYGTDETFINDSWQLSVMSYFDQVDNTTTNASFGYIV 328
Query: 182 TPMVSDIVAVQKIYGAP---KGSLGNNIYK--------------------IEVQQKDSPF 218
+ M++DIVA+Q +YGAP + G+ + + F
Sbjct: 329 STMMADIVAIQNLYGAPDEDSETAGDTTWGANTTLTDSYLSEVFGALEGDFSFNMTGNDF 388
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
TIYD G D +DL+ + IDLN ES+S + G N+ IA+ TVIE+V+ SGND
Sbjct: 389 ALTIYDVSGTDTIDLSPNT-TNDRIDLNDESFSDVAGRIGNLGIARDTVIENVIAGSGND 447
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ GN N +G D+ G +G DT F A + + + + + D L
Sbjct: 448 TITGNEVGNEIHAGNGTDIISGGAGDDTIFGGADALDLRDVVYGGSGNDSIDGGYGNDEL 507
Query: 339 S------------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + D + A + + G D
Sbjct: 508 RGDAGNDSIEGGFGSDTVIGGDGDDVLTGSALSDQVFGGAGSDFVNGGFGHDRVNGGGDA 567
Query: 387 YEF 389
+F
Sbjct: 568 DKF 570
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 11/143 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS-----SIGGYEKN 259
+ I+ G D++ D T+ GG +DL + SI G N
Sbjct: 446 NDTITGNEVGNEIHAGNGTDIISGGAGDDTIFGGADA-LDLRDVVYGGSGNDSIDGGYGN 504
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +S+ G G+D VIG ++V S+ +D G +G D
Sbjct: 505 DELRGDAGNDSIEGGFGSDTVIGGDGDDVLTGSALSDQVFGGAGSDFVNGGFGHDRVNGG 564
Query: 320 RFENAIIVYDANEHKQDFLSDVE 342
+ H D++ D +
Sbjct: 565 GDADKFFHLGVANHGSDWIQDYD 587
>gi|312959818|ref|ZP_07774334.1| alkaline metalloprotease precursor AprA [Pseudomonas fluorescens
WH6]
gi|311285984|gb|EFQ64549.1| alkaline metalloprotease precursor AprA [Pseudomonas fluorescens
WH6]
Length = 552
Score = 267 bits (683), Expect = 4e-69, Method: Composition-based stats.
Identities = 92/360 (25%), Positives = 143/360 (39%), Gaps = 46/360 (12%)
Query: 5 KPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP Y+T++ A HL R WS+ K D+ T + R L W+
Sbjct: 27 KPSYSTDKAAKHLTRSGSRWSDRNKDKKIDLSYTLAP-----GFTSAEKHRIREGLKSWA 81
Query: 64 KVVDLTFEETSIHSDIKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYG-IGKG 117
+V ++TF E + D G+ P YF E + + + + G
Sbjct: 82 EVTNVTFTENATGRDGVLKIKGLPDYPGGWATLPN---PYFEEGSVNVGTSRTHTKLEHG 138
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T +HE+GHA+GL HP G Y D+ +VMSY
Sbjct: 139 TQFDKTFVHEVGHAIGLKHPH---------GDVEPYREDTSAYTVMSYHDASFGDHPYER 189
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQ---------QKDSPFIQTIYDSGG 227
+ PM+ DI AVQ++YGA + + Y + ++D+GG
Sbjct: 190 KKVSAPMLHDIAAVQRLYGANTETRKTDTTYGFNANAGRDFYTLKSARDKPVFCVWDAGG 249
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D LD + I L ES+S +GG N++IA+ +E+ VG G+D +IGN+ANN
Sbjct: 250 TDTLDFSGF-RQDQKISLKAESFSDVGGMIGNVSIAKGVTVENAVGGFGHDTLIGNTANN 308
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G D +G+ G + F Y + + +DF S +R+ +
Sbjct: 309 RLTGGPGADTLEGNGGRNVFAYDNVTDS-----------TPSHPDLIKDFASGADRIDIS 357
>gi|294675715|ref|YP_003576330.1| M10 family peptidase [Rhodobacter capsulatus SB 1003]
gi|294474535|gb|ADE83923.1| peptidase, M10 family [Rhodobacter capsulatus SB 1003]
Length = 586
Score = 267 bits (682), Expect = 4e-69, Method: Composition-based stats.
Identities = 112/355 (31%), Positives = 166/355 (46%), Gaps = 27/355 (7%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T + +AD+L+ + SN D + + ++ D+ L + Q++ARWAL WS V +L
Sbjct: 139 TIDDLADYLVNGYWESNGGQARSFDTTSDNVITVDLHNLTADGQQLARWALQAWSAVANL 198
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI--NFDKADVWRYGIGKGTILSHNALH 126
F ET+ +DI+F S++G T N D A + YG +H
Sbjct: 199 VFVETTGTADIEFDDSDDGAYSTSNTTGTRINSSFVNIDTAWIANYGTTMDGYSLQTYIH 258
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMV 185
EIGHALGL H G+YNG Y D + NDS+ SVMSYF ++ ASF + + M+
Sbjct: 259 EIGHALGLGHQGAYNGS-ATYPDDATFPNDSWHLSVMSYFSQDDNTTSGASFAWVMSAMM 317
Query: 186 SDIVAVQKIYGAPKGSLGNNIY-------------------KIEVQQKDSPFIQTIYDSG 226
SDI+A+Q +YGA +LG+ +Y P TIYD+G
Sbjct: 318 SDIIAMQSMYGASTTTLGSTVYGRNSNVGGYLETLFDSLVAGTSATYGGDPVTMTIYDAG 377
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D +D + V ++L S+S++ G N+ IA+ TVIE V +GND+++GN+A+
Sbjct: 378 GRDTIDFS-FSNVNQTLNLAPGSFSNLAGLVGNLGIARGTVIEIGVTGNGNDLIMGNNAS 436
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
N GND G +G D + K FL +V
Sbjct: 437 NTLMSRGGNDTLRGGAGNDKLDGGTGND---FIDGSTGQDTLIGGAGKDTFLFNV 488
>gi|126729145|ref|ZP_01744959.1| Serralysin [Sagittula stellata E-37]
gi|126710135|gb|EBA09187.1| Serralysin [Sagittula stellata E-37]
Length = 858
Score = 265 bits (678), Expect = 1e-68, Method: Composition-based stats.
Identities = 110/383 (28%), Positives = 165/383 (43%), Gaps = 20/383 (5%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P Y+ +++A L + S R D L+F++++L+ + A A WS V
Sbjct: 39 PSYSLDQVAAQLTDGYWHSTGRARRSFDAEAGDTLTFNVSQLDSTGRATAIEAFEAWSAV 98
Query: 66 VDLTFE-ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
L F+ TS +D F ++G + + + W+ G G
Sbjct: 99 SGLNFQITTSTGADFVFTDDSSGAYSYSYIAGQTITQSYVNVNTGWQ---GYGDYYLQTY 155
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATP 183
+HEIGHALGL H G+YNG +G D Y+ DS+ S+MSYF ++ +AS Y AT
Sbjct: 156 IHEIGHALGLGHAGNYNGS-ADFGTDAHYQQDSWQYSIMSYFGQWENPHTNASSNYLATT 214
Query: 184 MVSDIVAVQKIYGAPKG-SLGNNIYKIEVQ------QKDSPFIQTIYDSGGDDLLDLTLI 236
++DI+A+Q +YG P + GN +Y + + I+DS G D ++L
Sbjct: 215 QLADILAIQNLYGTPTNVNTGNTVYGDNTNLAQKGMGLSTQWAVAIFDSAGTDTINLGSR 274
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+DL ++S + G N IA+ VIE+ SG D + NSANN SGND
Sbjct: 275 S-ANQRLDLRDGTFSDLNGEVGNFAIARGAVIENATTGSGRDSITTNSANNNIHSGSGND 333
Query: 297 VFDGSSGLDTFFYYAPSYLYKI------YRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GS G DT A S L + Y F + +E L FAD
Sbjct: 334 TIFGSDGNDTINGGAGSDLLAMGGAFTEYTFGCNGAATLTVNGNTTRFTGIETLTFADGT 393
Query: 351 IDSVNVKQRSILEYTASYEDLIQ 373
+ + +TA+ D
Sbjct: 394 AVVGSSANGQTITFTATGADYAA 416
>gi|254471210|ref|ZP_05084612.1| secreted alkaline metalloproteinase [Pseudovibrio sp. JE062]
gi|211959356|gb|EEA94554.1| secreted alkaline metalloproteinase [Pseudovibrio sp. JE062]
Length = 530
Score = 264 bits (675), Expect = 3e-68, Method: Composition-based stats.
Identities = 108/338 (31%), Positives = 166/338 (49%), Gaps = 14/338 (4%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+T ++IA L + S R DV L+ ++ LN + +E+A AL W+ V
Sbjct: 143 FTNDQIAAQLTDGYWNSTGRGRRAFDVSPGESLTVNLNGLNSSGRELATKALEAWTMVTG 202
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNAL 125
+ F S ++ I F +++G + + + W RYG +
Sbjct: 203 IEFRTVSSNAQITFDDNDSGAYANSTTRGSTILSSTVNVSTDWVARYGTDLDGYAFQTYV 262
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPM 184
HEIGHALGL H G+YN G YGVDN Y NDS+ ++MSYF +++ +DAS Y TPM
Sbjct: 263 HEIGHALGLGHAGNYN-GAATYGVDNHYSNDSWQATIMSYFDQVENTNVDASRAYVVTPM 321
Query: 185 VSDIVAVQKIYG-APKGSLGNNIYKIEVQQKD--------SPFIQTIYDSGGDDLLDLTL 235
++DI+A+Q +YG A G+ +Y +P TI D+GG+D ++ +
Sbjct: 322 IADILAMQDLYGTATDLRTGSTVYGENSTAGGYYDDIADLNPATFTIMDNGGNDSINFSS 381
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ I L E++S + G NMTI + TVIE+ SGND +IGN A+N + ++GN
Sbjct: 382 V-RADQKISLVAETYSDVNGLTGNMTIMRDTVIENAYSGSGNDELIGNDADNGLYANAGN 440
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
D +G G DT + S + A + D +
Sbjct: 441 DTLEGGLGDDTLSGGSGSDTFVFNINCGADTIIDFSNG 478
>gi|32456013|ref|NP_862015.1| rb140 [Ruegeria sp. PR1b]
gi|22726365|gb|AAN05161.1| RB140 [Ruegeria sp. PR1b]
Length = 509
Score = 264 bits (674), Expect = 4e-68, Method: Composition-based stats.
Identities = 112/405 (27%), Positives = 176/405 (43%), Gaps = 37/405 (9%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDV----LTTHRLSFDITELNPNAQEVARWALGEWSK 64
+ +A +L + + ++ H ++ D+T L Q +ARWAL W +
Sbjct: 64 SLTELASYLTSGYWEDGGSSAHSFAATVGEISAHVITVDLTALTSTGQRLARWALDSWEQ 123
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRY---FMEINFDKADVWRYGIGKGTILS 121
V DL F E + DI F S++G T +D +N + + YG +
Sbjct: 124 VADLHFTEVTRGGDITFDDSDSGAYSTSSFDEDGNTLAATVNISQDWLATYGTTLASYSM 183
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYC 180
+HEIGHALGL H G+YNG Y NDS+ SVMSY ++S + A + +
Sbjct: 184 TTFVHEIGHALGLGHLGNYNGSTGT----QIYANDSWQLSVMSYIAQSENSNVSADYAFP 239
Query: 181 ATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD--------------SPFIQTIYDS 225
+ PM++DIVA+Q +YG P + G++ + P TIYD
Sbjct: 240 SGPMMADIVAIQSLYGTPIESDDGDSTWGQGGTYSRYFTTLFASITDPTIEPIAFTIYDV 299
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D+LDL+ + ++LN +S++ G+ N+ IA TVIE++ GND V GN+A
Sbjct: 300 GGTDMLDLSG-SRTADVVNLNAGGFSNVAGHIGNLAIASGTVIENIKVGRGNDTVYGNAA 358
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+NV +G D+ G SG D F +A + D+L E
Sbjct: 359 DNVIRGQTGWDLLHGGSGRDRIFGGMGRDTIS----GDAGNDRLFGKKGHDWLDGGE--- 411
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
I + + + D+I+ D+ + +FG
Sbjct: 412 --GNDILFGGLGRDTFFYGFGHDADIIRDFDLDLDKLAFSALDFG 454
>gi|254464133|ref|ZP_05077544.1| serralysin [Rhodobacterales bacterium Y4I]
gi|206685041|gb|EDZ45523.1| serralysin [Rhodobacterales bacterium Y4I]
Length = 1158
Score = 263 bits (672), Expect = 7e-68, Method: Composition-based stats.
Identities = 112/386 (29%), Positives = 177/386 (45%), Gaps = 15/386 (3%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP YT ++IA +L + + + DV T +L+ +++ LN +E AR AL W+
Sbjct: 32 GKPTYTVDQIAQYLYKGFWEDTGRTQRSFDVQTGGQLTVNLSGLNATGKETARKALESWT 91
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+ + F ET+ + I F +N+G + + + + + D W G
Sbjct: 92 ALTGIEFAETTGSAKITFDDNNSGAYASSTVSNGTILSSHINVDDGW---SAYGNYYLQT 148
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCAT 182
+HEIGHALGL H G+YNG YG D + NDS+ S+MSYF +++ +DASF Y AT
Sbjct: 149 FIHEIGHALGLGHTGNYNGS-ASYGSDAHFANDSWQMSIMSYFSQSENTAVDASFAYLAT 207
Query: 183 PMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK------DSPFIQTIYDSGGDDLLDLTL 235
++DI AV +YG P G+ Y + + I DSGG D+++L
Sbjct: 208 AQLADIAAVHHLYGTPVNVETGDTTYGDGQTTGRFGMDLNGGWAVAIVDSGGTDVINLGS 267
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
++LN ++SS+ G N +IA TVIE+ + SG D + GN+A+NV +GN
Sbjct: 268 RSY-NQTLNLNAGTFSSLNGKTGNFSIASGTVIENAITGSGIDSITGNAADNVLDSGAGN 326
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G DT + Y VY D ++D L D+ S
Sbjct: 327 DQISAGGGNDTLIGGTGAD-YLTGGAGADRFVYRKLGESGDSIADF-SLAAGDRVDVSAL 384
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFE 381
++ A+ + ++ +
Sbjct: 385 LQDIGYTGTDAAADGVVSLQAGSGGS 410
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 7/178 (3%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+NIY + + T+ D+ GG D LDL+ + + I L + +IG +
Sbjct: 481 DNIYTFTNSFVPNWTSVLGTVTDTNGGTDTLDLSAVTYTSS-ITLQSGVSGTIGSKT--L 537
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+++ + IE+++ S +D GNSA N+ GND G G DT S
Sbjct: 538 TVSEGSEIENLILGSASDKGYGNSAANLIEGRDGNDQLFGLDGDDTLTGGNGSDKLYGGL 597
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+++ + D + + D L+ L G D
Sbjct: 598 GSDSLDGGEGRNQLYGEDGD-DTVLAGDGADKIDGGAGNDSLDGGGGRNQLYGEDGDD 654
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 49/171 (28%), Gaps = 12/171 (7%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G D + GG N + + G + + T+ + + G +GND
Sbjct: 654 DTVLAGDGSDKI----YGGAGNDSLNGGGGRNQLYGEDGDDTVLAGDSSDRIDGGAGNDS 709
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHK 334
+ G NN GNDV SG D + + +
Sbjct: 710 LDGGGGNNRVEGGLGNDVIITGSGRDLLYGGDGNDTLSAGDGYNKADGGLGDDLISGGSG 769
Query: 335 QDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+D + + D + + + + L G D +
Sbjct: 770 RDQFKGGDGNDTIAAGDGYNKADGGLGDDSISGGSGKDQLSGGDGDDTIAA 820
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND + G S +++ S+G+D +G +G DT A + ++ ++A +
Sbjct: 1025 INGGAGNDTIRGGSGDDMLDGSAGSDRLEGGAGADTLKGGADADVFVFASADDAGDILRD 1084
Query: 331 NEHKQDFLSDV 341
D+
Sbjct: 1085 FRLGDGDALDI 1095
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 1/128 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +I + + + G GND + +N G+DV SG D
Sbjct: 863 VSGDDGDDSITSGSGKDKIKGGLGNDTIAAGDGDNQISGDDGDDVITSGSGKDKIKGGLG 922
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+N + D N+ S ++++ + + A + ++
Sbjct: 923 EDTLSAGGGDNKLDGGDGNDVIT-SGSGSDKVQGGNGDDLIETGSGADNVNGGAGNDTIL 981
Query: 373 QVIGQDVF 380
D
Sbjct: 982 AGADADKV 989
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 47/173 (27%), Gaps = 12/173 (6%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
I G DLL GG N + ++ G + I+ + + G GN
Sbjct: 724 GNDVIITGSGRDLL----YGGDGNDTLSAGDGYNKADGGLGDDLISGGSGRDQFKGGDGN 779
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI--------IVYD 329
D + N G+D G SG D +N I
Sbjct: 780 DTIAAGDGYNKADGGLGDDSISGGSGKDQLSGGDGDDTIAAGDGDNKADGGEGHDSITSG 839
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + K + + D + + + + +G D +
Sbjct: 840 SGKDKIKGGLGNDTIAAGDGDNQVSGDDGDDSITSGSGKDKIKGGLGNDTIAA 892
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 50/181 (27%), Gaps = 12/181 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +Y G D LD GG + ++ + I +
Sbjct: 581 DDTLTGGNGSDKLYGGLGSDSLD----GGEGRNQLYGEDGDDTVLAGDGADKIDGGAGND 636
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G G + + G ++ G+D G +G D+ ++ ++ D
Sbjct: 637 SLDGGGGRNQLYGEDGDDTVLAGDGSDKIYGGAGNDSLNGGGGRNQLYGEDGDDTVLAGD 696
Query: 330 --------ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A D R+ + R +L + L G + +
Sbjct: 697 SSDRIDGGAGNDSLDGGGGNNRVEGGLGNDVIITGSGRDLLYGGDGNDTLSAGDGYNKAD 756
Query: 382 S 382
Sbjct: 757 G 757
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 1/142 (0%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + G + N I + + V G +G+D++ S + +GND + D
Sbjct: 930 GGDNKLDGGDGNDVITSGSGSDKVQGGNGDDLIETGSGADNVNGGAGNDTILAGADADKV 989
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
++ I + ++ + A +L+ +A
Sbjct: 990 IGGDGGDSLDGGDGDDKISAGNGDDTADGGDGADKINGGAGNDTIRGGSG-DDMLDGSAG 1048
Query: 368 YEDLIQVIGQDVFESMKHFYEF 389
+ L G D + F
Sbjct: 1049 SDRLEGGAGADTLKGGADADVF 1070
>gi|238797053|ref|ZP_04640556.1| Metalloprotease [Yersinia mollaretii ATCC 43969]
gi|238719098|gb|EEQ10911.1| Metalloprotease [Yersinia mollaretii ATCC 43969]
Length = 433
Score = 263 bits (671), Expect = 8e-68, Method: Composition-based stats.
Identities = 96/392 (24%), Positives = 155/392 (39%), Gaps = 44/392 (11%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHR------------LSFDITELNPNAQEVARWA 58
E IA +++ W+ + L+ D N A+ +
Sbjct: 25 ENIAPNIVTHYSWNGEGHYGRGISLSYSFNIPVRNDMLDGLSPHDFFPFNQFQVNQAKKS 84
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWR 111
+ W+ + +++F E ++ N +G+ P Y + IN +
Sbjct: 85 MQAWADIANISFTEAVDFDNVNIGFYNFSEKSIRSGFAFHPNYSRFSGVYINHSFGE--N 142
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
K HEIGH+LGL HP N G + + + S+MSY+ S
Sbjct: 143 TKPTKSNYGGFTLTHEIGHSLGLKHPH--NAGDTIKDQKH-----THQVSIMSYYSESSS 195
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQ---------KDSPFIQT 221
D +TP + D+ AVQ +YGA G+ IY I
Sbjct: 196 NADYCDDNVSTPQLYDVAAVQYLYGANMKTRTGDTIYGFNSNSERDFFTANAPTDKLIFC 255
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+GG D D + +N I+L S+S +GG N++IA VIE+ +G SGND +
Sbjct: 256 VWDAGGMDTFDFSGYSEDQN-INLKELSFSDVGGLTANISIAADVVIENAIGGSGNDTLY 314
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD---FL 338
GN ANN+ +G D G +G + F Y PS I + I ++A + K D FL
Sbjct: 315 GNDANNILSGGAGADQLWGINGHNVFRYDKPSDSTSISA--DTIHDFNAEKDKIDLSPFL 372
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYED 370
S + Q D ++ ++++ S
Sbjct: 373 SGNRNIPLIVQNYDDISEITSLMIDFGISNRQ 404
>gi|197106755|ref|YP_002132132.1| alkaline metalloproteinase [Phenylobacterium zucineum HLK1]
gi|196480175|gb|ACG79703.1| alkaline metalloproteinase [Phenylobacterium zucineum HLK1]
Length = 551
Score = 261 bits (666), Expect = 4e-67, Method: Composition-based stats.
Identities = 97/430 (22%), Positives = 151/430 (35%), Gaps = 52/430 (12%)
Query: 4 IKPVYTTERIADHLL-----RDQYWSNYFIRYKPDVLTTHR----------LSFDITELN 48
K +T +R A L + + + ++ + + N
Sbjct: 33 GKESFTIDRAAKQLTGFDPVSGVPYGGWGPVGQAVTVSYAFRSNAPFEMPTDTTGFSRFN 92
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS--------RYFM 100
AL WS V ++ F + + S+N + Y F
Sbjct: 93 AAQIAQTELALQAWSDVANIRFVRSGFGLSGEGAYSDNAQMLFSNYSGGQDGASAFATFP 152
Query: 101 EINFDKADVW-------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGVD 150
+ DVW G +H +HEIGHA+GLMHPG Y+ +
Sbjct: 153 GRSAAAGDVWINITARDNSAPASGNYGAHVLVHEIGHAIGLMHPGDYDADATSNFTWSQH 212
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
+Y DS +VMSYF ++ Y ATP + DI A Q YG G+ +Y
Sbjct: 213 AEYFEDSRQYTVMSYFSESNTGASYGLRYPATPQLDDIAAAQIEYGPNWTTRTGDTVYGF 272
Query: 210 EVQ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
S + ++D+GG D LD + G IDL +S++GG N+
Sbjct: 273 NSTAERPWFEAGSASSRVVFAVWDAGGTDTLDFSGYG-QNQLIDLREGFFSNVGGLTGNV 331
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL----- 315
IA+ VIE+ G SG D++ GN+ N F G D +G +G D +
Sbjct: 332 AIAKGAVIENARGGSGGDLINGNAQANALFGGVGGDTLNGEAGQDFLRGEDGNDSLFGGA 391
Query: 316 --YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLI 372
++ V + F D+ D+V + LE A + +
Sbjct: 392 EFDDLHGNWGEDTVSGGDGGDWVVGGQGNDRLFGDEGGDAVLGNLGNDTLEGGAGNDVVR 451
Query: 373 QVIGQDVFES 382
G D+
Sbjct: 452 GGQGDDLIAG 461
>gi|238761252|ref|ZP_04622229.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238761505|ref|ZP_04622481.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238700479|gb|EEP93220.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238700732|gb|EEP93472.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
Length = 436
Score = 260 bits (664), Expect = 6e-67, Method: Composition-based stats.
Identities = 87/348 (25%), Positives = 137/348 (39%), Gaps = 46/348 (13%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS-------SNNGYVCTPRY 94
I+ LN R A+ S V ++ F E S++++I ++ S GY +P
Sbjct: 73 ISALNQWQISQTRIAMQSISDVANIRFIEVNESVNANIPIVNVHPEQPISAAGYAYSPNQ 132
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
+ + IN D + HEI H LGL H
Sbjct: 133 RNLSPVCINADFPE--NLTPTHSNYGGRVFTHEIMHTLGLKHTHD-------------TV 177
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQ 213
+ SVMSY+ S D Y TP + DI A+Q +YG + GN+IY
Sbjct: 178 RLTQQKSVMSYYSEWYSDADYGGHYAYTPQLYDIAALQYLYGPNMSTRTGNDIYTYSSHA 237
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I I+D+ G D LD + I+L S+S IGG + N++IA VIE+ +G
Sbjct: 238 P----ILCIWDADGIDTLDFSYQT-QDQVINLTAGSFSHIGGLKGNISIAYGVVIENAIG 292
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------ 327
GND + GN NV G+D G +G D + + + + E+++
Sbjct: 293 GCGNDQLWGNKEVNVLAGGDGDDKLSGGNGADHLWGGKGNNTFTYHHIEDSLTTSADTIH 352
Query: 328 -YDANEHKQDF---------LSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + E K D ++ V++ F+ Q + + Y
Sbjct: 353 DFKSGEDKIDLSPLIYGNEDIALVDKFSFSGQTEIMQKYDEVRDITYL 400
>gi|119383574|ref|YP_914630.1| peptidase domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119373341|gb|ABL68934.1| peptidase domain protein [Paracoccus denitrificans PD1222]
Length = 820
Score = 258 bits (658), Expect = 3e-66, Method: Composition-based stats.
Identities = 115/408 (28%), Positives = 171/408 (41%), Gaps = 39/408 (9%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+T IA L + + R DV L+ D++ L +++A AL W++V
Sbjct: 150 FTMAEIALQLTDGYWEATGRSRRAFDVGQGDVLNVDLSGLTQEGRQLAGMALSAWAQVTG 209
Query: 68 LTFEE---TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSH 122
+ F T+ I F S+ G + + + + W YG G +
Sbjct: 210 IVFNRNPGTNATIHITFDDSDWGAWSSSMTSGDRIVSSHVNIGLDWLISYGTGYNSYSYQ 269
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCA 181
+HEIGHALGL H G+YNG V GV+N Y NDS+ SVMSYF ++ +DASF Y A
Sbjct: 270 TYIHEIGHALGLGHAGNYNGS-AVLGVNNHYLNDSWQASVMSYFDQAENVWVDASFAYIA 328
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS---------------PFIQTIYDSG 226
+PM +DI+A+Q++YG GNN Y S TI+D G
Sbjct: 329 SPMTADILAIQRLYGPTAIRTGNNTYGETTNAGPSYATIAALLRNADTRDDIAFTIFDQG 388
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+LDL I L + S+ G N++I T+IE+ GND+VIGN A+
Sbjct: 389 GVDMLDLGTDT-RGQRISLVAGTSSNAYGLVGNISIMPGTLIENAQAGRGNDLVIGNWAD 447
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRFENAIIVYDANEHKQDFLSD 340
N+ +GND G++G DT + +Y + + +A D +
Sbjct: 448 NILRGGAGNDTLRGAAGNDTLNGQGGADRLVGGVGDDVYVTDGRDQIVEAAGQGIDTVRS 507
Query: 341 V----------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ D + L A L G D
Sbjct: 508 TVTLQLGANLENLVLISNAAQDGGGNALANRLTGNAHANRLEGFSGND 555
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 23/174 (13%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSS---IGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D GG+ L + N + E +S + G + N T+ + + G +G D++
Sbjct: 529 DGGGNALANRLTGNAHANRL----EGFSGNDTLLGGQGNDTLYGGNGWDVLGGGAGADLL 584
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRFENAIIVYDANEHK 334
IG + N++ +GND G +G DT + +Y + + +A
Sbjct: 585 IGGNGNDILRGWTGNDTLRGGAGNDTLNGQGGADRLEGGAGDDVYVTDGRDQIVEAAGQG 644
Query: 335 QDFLSDV----------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + + ++ D + L A L G D
Sbjct: 645 IDTVRSTVTLRLGANLENLVLISNAAQDGSGNGLANRLTGNAHANRLEGFFGND 698
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 8/171 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDLNTESWSSIGG 255
+G G+++Y V ++ G D + T+ G + L + + G
Sbjct: 621 EGGAGDDVY---VTDGRDQIVEA--AGQGIDTVRSTVTLRLGANLENLVLISNAAQDGSG 675
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + G GND ++G N++ F G+D +G +G D
Sbjct: 676 NGLANRLTGNAHANRLEGFFGNDTLLGRQGNDLLFGGQGDDWLEGGAGADLLVGGQGDDT 735
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + DF D++ LR D +L+
Sbjct: 736 MLGGAGADHFVFQGGRDVVGDFQDDLDTLRIDDALWGGGPRSVAQVLQLAH 786
>gi|149186450|ref|ZP_01864763.1| Serralysin [Erythrobacter sp. SD-21]
gi|148830039|gb|EDL48477.1| Serralysin [Erythrobacter sp. SD-21]
Length = 767
Score = 256 bits (655), Expect = 6e-66, Method: Composition-based stats.
Identities = 116/408 (28%), Positives = 171/408 (41%), Gaps = 31/408 (7%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
Y+ ++IA+ L YW + T + ++ L+ + +A A+ W+ V D
Sbjct: 148 YSLDQIANQLT-SGYWGGNERAF------TQPIFYEFVGLSQGEERLALEAMQYWATVAD 200
Query: 68 LTFEETSIHS---DIKFISSNNGYVCTPR----YDSRYFMEINFDKADVWRYGIGKGTIL 120
+ F S S ++ F +S G +N A +YG G+
Sbjct: 201 IDFSPASSGSSPANLIFQNSEEGAFAQSSVQFGNGGIVSSTVNVSAAWYAQYGSTLGSYT 260
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD----SMMDAS 176
LHEIGHALGL H G+YN G Y D Y NDS+ T+VMSYF + S +
Sbjct: 261 FQTYLHEIGHALGLGHAGNYN-GAASYANDATYLNDSWATTVMSYFDQSENTYFSQQGFN 319
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS--------PFIQTIYDSGGD 228
Y TPM++DIVA+Q +YGAP G++IY D+ TIYDSGG
Sbjct: 320 SVYVGTPMLADIVAIQNLYGAPSTRTGDDIYGFNSVGIDAVFNATLYPDIAYTIYDSGGH 379
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D LD + IDL E +SS+GG N+ IA+ ++E +G SG D +IGN NV
Sbjct: 380 DTLDYSGFA-ADQVIDLRPEMYSSVGGNIGNVAIARGVILEDAIGGSGADQLIGNDVTNV 438
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + G+DV DG D + + + N + +A D + + L
Sbjct: 439 LWGNGGDDVIDGGILADILWGGDGNDTL-VGSAGNDTLRGEAGNDTIDGGASWDYLFGGP 497
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
L A + L G D + + + G
Sbjct: 498 GNDTLTGGNGNDGLFGDAGDDTLDGGAGADLLRGGGGEDYLDAGAGND 545
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 11/171 (6%)
Query: 215 DSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ +GGDD++D L GG N + + ++ G N TI +
Sbjct: 432 GNDVTNVLWGNGGDDVIDGGILADILWGGDGNDTLVGSAGNDTLRGEAGNDTIDGGASWD 491
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND + G + N+ F +G+D DG +G D + I
Sbjct: 492 YLFGGPGNDTLTGGNGNDGLFGDAGDDTLDGGAGADLLRGGGGEDYLDAGAGNDVI---- 547
Query: 330 ANEHKQDFL--SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E D L D + + A +D+V + L Y + D I D
Sbjct: 548 KGEWASDTLLGGDGDDIILAGDGLDTVIAGSGNDLVYGEAGRDTIYGADGD 598
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 8/151 (5%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWS 251
G G++ + + G+D++ TL+GG + I L +
Sbjct: 513 GDAGDDTLDGGAGADLLRGGGGEDYLDAGAGNDVIKGEWASDTLLGGDGDDIILAGDGLD 572
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ N + +++ G+ G+D + G S +++ G+D G +G D A
Sbjct: 573 TVIAGSGNDLVYGEAGRDTIYGADGDDRLYGASEDDLLVGGDGDDELFGGAGDDRIAGRA 632
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ L + + D D ++D +
Sbjct: 633 GNDLLTGGAGNDLFVFGDYGAGNVDTITDFQ 663
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/198 (13%), Positives = 57/198 (28%), Gaps = 8/198 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPF---IQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS 252
GS GN+ + E ++ G+D L G L+ + +
Sbjct: 468 GSAGNDTLRGEAGNDTIDGGASWDYLFGGPGNDTLTGGNGNDGLFGDAGDDTLDGGAGAD 527
Query: 253 I-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + + G +D ++G +++ G D SG D + A
Sbjct: 528 LLRGGGGEDYLDAGAGNDVIKGEWASDTLLGGDGDDIILAGDGLDTVIAGSGNDLVYGEA 587
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ + ++ D E A + + + +
Sbjct: 588 GRDTIYGADGDDRLYGASEDDLLVGGDGDDELFGGAGDDRIAGRAGNDLLTGGAGNDLFV 647
Query: 372 IQVIGQDVFESMKHFYEF 389
G +++ F E
Sbjct: 648 FGDYGAGNVDTITDFQEG 665
>gi|238787699|ref|ZP_04631496.1| Metalloprotease [Yersinia frederiksenii ATCC 33641]
gi|238724042|gb|EEQ15685.1| Metalloprotease [Yersinia frederiksenii ATCC 33641]
Length = 416
Score = 253 bits (645), Expect = 9e-65, Method: Composition-based stats.
Identities = 90/310 (29%), Positives = 129/310 (41%), Gaps = 36/310 (11%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG--------YVCTPRYDSR 97
N A+ A+ + V ++ F + S + I N G Y P D+
Sbjct: 52 SFNRQQIRQAKIAMQSCADVANIQFIQASHNHSANLIFLNYGQPDGKNVGYAYYPSPDNF 111
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ NF +++ + + +HEIGHALGL H NG +
Sbjct: 112 SPVWTNFAVSNISSPTVI--NFGGYAFIHEIGHALGLGHSHGPNG-------------HT 156
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD- 215
SVMSY QDS D S Y +TP + DI A+Q +YG GN Y
Sbjct: 157 QQVSVMSYLSEQDSGADYSGNYPSTPQMLDIAALQYLYGTNISTRTGNTTYGFNSNSNRP 216
Query: 216 --------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I ++D+GG D D + +N I+LN S+S+IGG N++IA
Sbjct: 217 YFTAYKARDVLIFCVWDAGGIDTFDFSGYWQNQN-INLNEGSFSNIGGLIGNVSIATGVC 275
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+ +G SGND + GNS NN G D G G +TF YY S + + I
Sbjct: 276 IENAIGGSGNDNIWGNSENNRIAGGLGADQLWGGGGSNTFVYYRVSD--SLTTSADTIHD 333
Query: 328 YDANEHKQDF 337
++ N+ D
Sbjct: 334 FNVNKDTVDL 343
>gi|296283662|ref|ZP_06861660.1| serralysin [Citromicrobium bathyomarinum JL354]
Length = 972
Score = 250 bits (639), Expect = 4e-64, Method: Composition-based stats.
Identities = 112/380 (29%), Positives = 173/380 (45%), Gaps = 23/380 (6%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P++T ++I+D L YW R+ V ++ ++T L Q +AR AL W+ V
Sbjct: 123 PIFTNDQISDQLT-SGYWGGSTRRWN--VAPGGTITVNLTGLTTEGQFLAREALNLWTDV 179
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFME---INFDKADVWRYGIGKGTILSH 122
+ F E + + I F + +G + +F +N + YG T
Sbjct: 180 TGINFSEITTSAQITFDDNESGAFAGGSTSNGFFTGNSRVNVSTDWLTNYGTTLNTYSFQ 239
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD----SMMDASFG 178
+HEIGHALGL H G+YNG Y D Y+NDS+ T++MSYF P + S ++
Sbjct: 240 TYIHEIGHALGLGHGGNYNGS-ADYPADALYQNDSWNTTIMSYFSPGENTYFSQQGFTYQ 298
Query: 179 YCATPMVSDIVAVQK-IYGAPKGS-LGNNIYKIEVQQK--------DSPFIQTIYDSGGD 228
Y TPMV+DI++ +Y + G+ G+ Y ++ I D GG
Sbjct: 299 YTITPMVADIISTNGGLYASYSGTRTGDTTYGFNNTSGRAVYDASVNANATVAIIDHGGI 358
Query: 229 DLLDLTLIGGV-KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D LD + I+LN E + + G N+ IA+ TVIE+ +G +G+D +IGN A+N
Sbjct: 359 DTLDYSFTNASYTQLINLNPEVFGNTRGRVGNLVIARGTVIENAIGGAGSDTLIGNIADN 418
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ ++GND DG G DT + Y I + + D LS +ERL F
Sbjct: 419 ILRGNAGNDTIDGGVGTDTAVFSGNRADYTITNLSGGRVQV-SGPDGTDTLSSIERLMFN 477
Query: 348 DQCIDSVNVKQRSILEYTAS 367
D + + + A
Sbjct: 478 DMVLGRSGASFGNATQAYAG 497
>gi|32456012|ref|NP_862014.1| rb139 [Ruegeria sp. PR1b]
gi|22726364|gb|AAN05160.1| RB139 [Ruegeria sp. PR1b]
Length = 643
Score = 247 bits (630), Expect = 4e-63, Method: Composition-based stats.
Identities = 118/415 (28%), Positives = 178/415 (42%), Gaps = 30/415 (7%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T + +A++L + ++ R+ D + ++ +++ L+ AQ++ARWA W V DL
Sbjct: 164 TLDEMAEYLTDGYWEDSFDSRHSFDTSDSTEITVNLSALSSGAQQLARWAFEAWELVADL 223
Query: 69 TFEETSIHS-DIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNAL 125
F ETS + DI F +++G T + + W YG + +
Sbjct: 224 EFVETSSSNVDILFRDNDSGAYATSSTSGGTIQSSEVNISQNWVSTYGSTISSYTFSTYI 283
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPM 184
HEIGHALGL H G YN G +YGVD + DS+ SVMSYF ++ +DAS+ A+ M
Sbjct: 284 HEIGHALGLGHQGDYN-GNAIYGVDETFALDSYQLSVMSYFSQEDNTEVDASYAEPASAM 342
Query: 185 VSDIVAVQKIYGA---PKGSLGNNIYKIE------------------VQQKDSPFIQTIY 223
++DI+A+Q++YGA S GN I+ D P TIY
Sbjct: 343 MTDIIAIQELYGAAGRNSASAGNTIWGANGTLDGYLADVFDGWGGSNANLGDEPVTITIY 402
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D+LDL+ + + S I G N+ IA+ TVIE GND VIGN
Sbjct: 403 DRDGIDMLDLSNNNSNNRLDLNDATA-SDINGLIGNLLIARDTVIEKAKMGRGNDTVIGN 461
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
ANN GND G +G D F ++ + + +
Sbjct: 462 EANNRLLGGGGNDALSGGAGQDKMFGGVGRDTLSGGAGQDKMFGGAGWDQLSGEGGNDRL 521
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGRD 396
L + + S +L ++ L G+D+ + F GRD
Sbjct: 522 LGGSGRDTLSGGAGNDRLLGKL-GHDTLNGGTGRDLMIGGKGADTFVFETGNGRD 575
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 24/171 (14%)
Query: 197 APKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
A G + + E + + G D + TL GG
Sbjct: 449 AKMGRGNDTVIGNEANNRLLGGGGNDALSGGAGQDKMFGGVGRDTLSGGAGQDKMFGGAG 508
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
W + G N + + +++ G +GND ++G ++ +G D+ G G DTF +
Sbjct: 509 WDQLSGEGGNDRLLGGSGRDTLSGGAGNDRLLGKLGHDTLNGGTGRDLMIGGKGADTFVF 568
Query: 310 YAPSYLYKIYR-----------------FENAIIVYDANEHKQDFLSDVER 343
+ I F +A + D D L+ +E
Sbjct: 569 ETGNGRDTIRDFALGQDKLQLESALAEGFGSATAMLDDLATVTDLLTLIEF 619
>gi|238757396|ref|ZP_04618582.1| Metalloprotease [Yersinia aldovae ATCC 35236]
gi|238704435|gb|EEP96966.1| Metalloprotease [Yersinia aldovae ATCC 35236]
Length = 422
Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats.
Identities = 87/329 (26%), Positives = 136/329 (41%), Gaps = 37/329 (11%)
Query: 26 YFIRYKPDVLTTHRLS--FDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKFI 82
F P + L+ I+ LN + A+ S V +++F E +I +
Sbjct: 40 SFPESIPSNYYYYELNHKIPISSLNQLQIDQAKSTFRNISDVANISFTEVKYTEVNIPIV 99
Query: 83 S-------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ S G+ P + IN D ++ H +HEI HA+GL
Sbjct: 100 NFHPENYISVGGFAYYPNAGEFTPVCINADVSE--NLAPTHLNSGGHVIVHEILHAVGLK 157
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H G + SVMSYF Q S + + +TP + DI A+Q +Y
Sbjct: 158 HTHDTAG-------------LTQRESVMSYFSEQYSGANYGGHHVSTPQLYDIAALQYLY 204
Query: 196 GAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
GA + G++IY I I+D+GG D+LD + I+L S+S++G
Sbjct: 205 GANMHTRTGHDIYTYSHHTP----ILCIWDAGGTDMLDYSDQN-QDQVINLTAGSFSNVG 259
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N++IA VIE+ +G SGND ++GN + NV G+D G G D +
Sbjct: 260 GLAGNVSIAYGVVIENAIGGSGNDELLGNESVNVLASGGGDDKLSGGGGADQLWGGKGHD 319
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ R E+++ D + D E
Sbjct: 320 TFIYRRAEDSLTTSS------DTIHDFEV 342
>gi|159045942|ref|YP_001534736.1| neutral zinc metallopeptidase [Dinoroseobacter shibae DFL 12]
gi|157913702|gb|ABV95135.1| neutral zinc metallopeptidase [Dinoroseobacter shibae DFL 12]
Length = 451
Score = 245 bits (625), Expect = 2e-62, Method: Composition-based stats.
Identities = 123/426 (28%), Positives = 174/426 (40%), Gaps = 51/426 (11%)
Query: 6 PVYTTERIADHL------LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWAL 59
P +T +++AD L R+ W + DI+ L Q A AL
Sbjct: 36 PTFTVDQVADQLKSGFFKSREASWDVEPG--------GEAIDVDISRLTEKGQFYAELAL 87
Query: 60 GEWSKVVDLTFEETS--------IHSDIKFISSNNGYVCTPRYDSR---YFMEINFDKAD 108
W+ + F T S I F +++G P +S Y IN +
Sbjct: 88 DAWTMTTGIEFNITELEIFAFGFTRSGIIFDDTDSGAYAQPIVNSENEIYTARINISQDW 147
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+ G +HEIGHALGL H G+YN G Y D Y NDS+ S+MSYF
Sbjct: 148 IRNDGETIDNYSFQTFIHEIGHALGLEHAGNYN-GNAKYSTDALYTNDSWQMSIMSYFSQ 206
Query: 169 QDS-MMDASFGYCATPMVSDIVAVQKIYG-APKGSLGNNIYKIEVQQKDS---------- 216
D+ +DASF Y TPM++DI AVQ++YG A GN IY Q S
Sbjct: 207 TDNASIDASFAYVVTPMIADITAVQQLYGVAGDLRPGNTIYGQPTTQGGSLMSMADGYYE 266
Query: 217 -------PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
P TI D GG D ++ + + +N I+LN + S + G + N+ I TVIE
Sbjct: 267 DFGDTSRPITYTIIDDGGFDAINFSDVTADQN-INLNGGAVSDVNGLKGNLVIFSTTVIE 325
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
VV SGND + GN ANN FF G D G G D + + ++
Sbjct: 326 YVVSGSGNDTLTGNGANNHFFAGDGRDTIFGGDGDDILEGQGGIDILTGGAGRDGFVLSG 385
Query: 330 ANEHKQDFLSDV---ERLRF--ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D ++D E L F A ++V +R+ + ++G +
Sbjct: 386 TGFDGLDIVTDFTDGEDLLFFAAADSFSDISVSERATGTVVGFNGEFAILLGVSSNQISA 445
Query: 385 HFYEFG 390
+ FG
Sbjct: 446 DDFVFG 451
>gi|209966405|ref|YP_002299320.1| Alkaline Protease, putative [Rhodospirillum centenum SW]
gi|209959871|gb|ACJ00508.1| Alkaline Protease, putative [Rhodospirillum centenum SW]
Length = 674
Score = 244 bits (623), Expect = 3e-62, Method: Composition-based stats.
Identities = 109/421 (25%), Positives = 175/421 (41%), Gaps = 70/421 (16%)
Query: 4 IKPVYTTERIADHLLRDQY-WSN-------YFIRYKPD-VLTTHRLSFDITELNPNAQEV 54
K ++ T+ IADHL+R W+ FI ++P + + + + + +E
Sbjct: 212 GKAIWDTDTIADHLIRTGTAWAAPGGVVRYGFIDHRPAEGYSPNGEAEGFSPFSAAQREA 271
Query: 55 ARWALGEWSKVVDLTFEETS--IHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADVW- 110
AR A W V+ + F E + I+F ++ G P YF + DVW
Sbjct: 272 ARQAAALWDDVLAIRFVEDTRPDGGQIRFANTTTG----PGQAWAYFPDARAAAGGDVWV 327
Query: 111 ------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGVDNDYENDSFLTS 161
+ G +HE+GHALGL HPG Y+ G Y +Y DS S
Sbjct: 328 NPDQASNLELAPGYYGLTTLVHEMGHALGLSHPGDYDAGDDGEISYAASAEYFQDSRQYS 387
Query: 162 VMSYFMPQDSMMDA------SFGYCATPMVSDIVAVQKIYGA-------------PKGSL 202
+MSY+ + + D F Y A+PM+ DI A Q++YGA +
Sbjct: 388 IMSYWDARLTGADHVDWWDLRFVYAASPMLHDIAAAQRLYGADRTTRTGDTTYGFNASAD 447
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG------- 255
+ + + P + ++D+GG D LD + + +DL ++SS GG
Sbjct: 448 LADRPSFDFTRNTQPVV-ALWDAGGTDTLDFSGF-DTPSVLDLRQGAFSSGGGRADVPAD 505
Query: 256 --------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++N+ IA TVIE+ VG SG+D+VIGN N +G D G+ G DT
Sbjct: 506 YAAQGDSLLKQNIAIAFGTVIENAVGGSGDDLVIGNEVANRLDGGAGADTLVGAQGRDTL 565
Query: 308 FYYAPSYLYKIYRFENA-------IIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQR 359
L+++ R ++ I+ +D + + D D + R DQ +
Sbjct: 566 VGGGGDDLFRLVRSGDSPVRAPDVIVDFDQGDDRIDLSAMDADLHRAGDQDFRFIGSAPF 625
Query: 360 S 360
+
Sbjct: 626 T 626
>gi|238751201|ref|ZP_04612696.1| Metalloprotease [Yersinia rohdei ATCC 43380]
gi|238710679|gb|EEQ02902.1| Metalloprotease [Yersinia rohdei ATCC 43380]
Length = 448
Score = 244 bits (622), Expect = 4e-62, Method: Composition-based stats.
Identities = 82/344 (23%), Positives = 128/344 (37%), Gaps = 41/344 (11%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY 98
N A+ A+ + ++ F ETS + + N GY P
Sbjct: 85 FNQQQIRQAKLAMQSCADAANIHFMETSQDNPANLLFLNYEQQDVTIAGYAYYPGQGDFS 144
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+ INF D + + + HE+GH LGL H + + +
Sbjct: 145 PLWINFAHCDAAN--PTQTSYSALILTHELGHTLGLKHTHNPDSY-------------TQ 189
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE------- 210
SVMSY Q S D + +TP + DI A+Q +YGA LGN Y
Sbjct: 190 QVSVMSYLSEQSSDADYLGHHPSTPQMLDIAALQYLYGANPHTRLGNTTYGFNSNSSREY 249
Query: 211 --VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I ++D+GG D D + I+LN S+S +GG + N++IA +I
Sbjct: 250 LTANNASDILIFCVWDAGGIDTFDFSGY-KQNQTINLNQLSFSDVGGLKGNISIAADVII 308
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-------YRF 321
E+ +G G+D + GN A+N G D G+ G +TF Y + S +
Sbjct: 309 ENAIGGDGDDNIKGNKADNRLTGGGGADQLWGNQGYNTFVYQSVSDSLTTAADTLHDFNV 368
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ I A + V++ F + + Y
Sbjct: 369 DKDKIDLSALALDSNKTRLVDKFSFGGDTEIMQHYDDIRDMTYL 412
>gi|114571037|ref|YP_757717.1| serralysin [Maricaulis maris MCS10]
gi|114341499|gb|ABI66779.1| Serralysin [Maricaulis maris MCS10]
Length = 1631
Score = 243 bits (621), Expect = 5e-62, Method: Composition-based stats.
Identities = 120/399 (30%), Positives = 175/399 (43%), Gaps = 35/399 (8%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+ I D+L SN F + D ++ +IT L Q +AR AL W + ++F
Sbjct: 1095 QEIGDYLD-----SNGFGGLQWDRSAGDTITVNITALTVAGQTLARAALQLWEDITGISF 1149
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFM---EINFDKADVWRYGIGKGTILSHNALHE 127
E + +I F G P S F+ +N A + YG +HE
Sbjct: 1150 TEVATGGEITFDDDEEGAFAGPDATSGGFITAASVNVGTAWLDTYGTNIDGYSFQTYIHE 1209
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVS 186
IGHALGL H G Y+G Y VD Y NDS+ SVMSYF +++ +DA FGY P V+
Sbjct: 1210 IGHALGLGHGGPYDGS-ADYAVDAIYLNDSWQASVMSYFSQNENTFIDADFGYVIGPQVA 1268
Query: 187 DIVAVQKIYGAPKGSLG-NNIYK---------IEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
DI+AV +YG + G + Y + +P TI+D+GG D +D +
Sbjct: 1269 DIIAVLDMYGGSTSTRGGDTTYGYNSTAGNVIFDATAHSNPVSFTIFDTGGTDTMDYSG- 1327
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES---- 292
DL +++S + G E N+ IA+ TVIE+ +G +GND+ IGN ANNV
Sbjct: 1328 SSANQTFDLREQAYSDLMGREGNVGIARGTVIENAIGGAGNDIFIGNDANNVLTGGGGGD 1387
Query: 293 -----SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVYDANEHKQD---FLSDVER 343
G+DVFDG SG DT + S Y + + +V D D L VE
Sbjct: 1388 RFYASGGSDVFDGGSGSDTVVFSGASTDYSLTTNGSGNTVVTDNRTGAPDGVVELISVET 1447
Query: 344 LRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDVFE 381
+ + + +D+ + + E
Sbjct: 1448 IVYDGGTSNPEYFGDPDFAGREGLDPDDMPALAPFNPNE 1486
>gi|296532125|ref|ZP_06894892.1| metallophosphoesterase [Roseomonas cervicalis ATCC 49957]
gi|296267549|gb|EFH13407.1| metallophosphoesterase [Roseomonas cervicalis ATCC 49957]
Length = 2039
Score = 243 bits (620), Expect = 8e-62, Method: Composition-based stats.
Identities = 100/367 (27%), Positives = 157/367 (42%), Gaps = 51/367 (13%)
Query: 258 KNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I V + G V+G + ++V SGN + DG +G DT
Sbjct: 1699 GNAGIRYDDVQVVRLEAAPGGVRQVLGGAGDDVLQAGSGNVLVDGGAGHDTVVLTGGIGG 1758
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQV 374
Y++ R +++ A+ L ++E +RFAD ++ + L Y + D++
Sbjct: 1759 YQMLRSGAELLLSAADGAV--TLRNIEAVRFADGLVELAHANTLFDPLHYMRANADVLA- 1815
Query: 375 IGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ H+ ++G EGRD F + YL + D+ +HY+ HG
Sbjct: 1816 ---SGMTAEAHYDQYGWREGRDPNAVFSTGGYLSANGDVEAA----GLNPLQHYLQHGAA 1868
Query: 433 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF----------V 481
EGR+P A F A Y+A + D+ A +H+ N+G EGR
Sbjct: 1869 EGRDPSAQFDAQFYLARNADVARAGLG-------ALEHYLNYGMAEGRVTGPAIGQRVEA 1921
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD+ YL + D+ G+ A H++ HG EGRNP+A F Y+A++ D+ A
Sbjct: 1922 GFDAEYYLLANADV----GAAGVDARGHWLQHGQVEGRNPNAYFDTRFYLAANTDVAAAG 1977
Query: 541 ADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
D +H+S FG++EGR S F+ YL D+ +HY+T G
Sbjct: 1978 MDP-------LEHYSRFGWQEGRQPSAAFDAGAYLRINPDVAAA----GVNPLEHYLTFG 2026
Query: 599 MKEGRAL 605
EGR L
Sbjct: 2027 HLEGRVL 2033
Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 38/196 (19%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F L Y+ ++ D++ + + H+ +G EGR F + YL + D+
Sbjct: 1801 FDPLHYMRANADVLASG-------MTAEAHYDQYGWREGRDPNAVFSTGGYLSANGDVEA 1853
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+HY+ HG EGR+P A F A Y+A + D+ A +H+ N
Sbjct: 1854 AG----LNPLQHYLQHGAAEGRDPSAQFDAQFYLARNADVARAGL-------GALEHYLN 1902
Query: 557 FGYEEGR----------SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
+G EGR F+ + YL + D+ G+ A H++ HG EGR
Sbjct: 1903 YGMAEGRVTGPAIGQRVEAGFDAEYYLLANADV----GAAGVDARGHWLQHGQVEGRN-- 1956
Query: 607 ISGMQFKSVMNLSEKS 622
F + L+ +
Sbjct: 1957 -PNAYFDTRFYLAANT 1971
>gi|46241703|gb|AAS83088.1| putative protease-like protein [Azospirillum brasilense]
Length = 589
Score = 243 bits (620), Expect = 8e-62, Method: Composition-based stats.
Identities = 98/411 (23%), Positives = 152/411 (36%), Gaps = 68/411 (16%)
Query: 7 VYTTERIA-------DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITE------------- 46
V++ +IA D LL W + L+ ++
Sbjct: 10 VFSVSKIAQSGRIEIDSLLAGYKWGEGSKPGEGVSLSYSFGVAGLSAYRDGYLTPDPGSV 69
Query: 47 --LNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFISSNNGYVCT--------P 92
L+ A+ R AL W+ V ++T E + + D++F SN P
Sbjct: 70 WTLSGTARAAIRQALNTWTAVANITCTEVADNALSCGDLRFGGSNAPATAYTVLPVADIP 129
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+F + D + W G+ +HEIGHA GL H G +P+
Sbjct: 130 EAGDVWFGPLFADPSLSW----ASGSYTYQTIVHEIGHAFGLKHLHEEYGAFPI----AP 181
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG---YCATPMVSDIVAVQKIYGAPK-GSLGNNIYK 208
DS L S MSY + + + TPMV DI A+Q +YGA + G+ +Y
Sbjct: 182 TGIDSQLYSTMSYRSYPGAPPGMGYWQDRFPTTPMVDDIAAIQYLYGANMSTNAGDTVYS 241
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY--------EKNM 260
Q +TI+D GG+D + IDL S+S +G + +
Sbjct: 242 W---QPGQAIFETIWDGGGNDTISWANQT-TDARIDLRPGSYSDLGPAWRAGFYMESRTL 297
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
IA IE+ +G SGND++IGN +N + +G+D DG G+DT +
Sbjct: 298 GIAYDCWIENAIGGSGNDILIGNERDNALYGGAGDDTLIGGAGNNLLDGGDGVDTAVFEG 357
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y I + D + L +E L F D + +
Sbjct: 358 APTSYTIRHSGAGEVTVDG-PQGTNTLRSIEHLSFGDMTLALSRDATPGTV 407
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E++VG +GND + + +G+DV DG +G + A + + +
Sbjct: 448 EAIVGGNGNDFINSRGGMDAIDGGAGDDVLDGGTGSNFLTGGAGHDTFFLDARSGEPVWS 507
Query: 329 DANEHKQDFLSDV 341
+ + + V
Sbjct: 508 TVTDLEAGEIVTV 520
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I + + G D + G + ++V +G++ G +G DTFF A S
Sbjct: 443 GSDDGEAIVGGNGNDFINSRGGMDAIDGGAGDDVLDGGTGSNFLTGGAGHDTFFLDARSG 502
>gi|254559808|ref|YP_003066903.1| Alkaline phosphatase [Methylobacterium extorquens DM4]
gi|254267086|emb|CAX22902.1| putative Alkaline phosphatase; Hemolysin-type calcium-binding domain
[Methylobacterium extorquens DM4]
Length = 1058
Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats.
Identities = 98/409 (23%), Positives = 164/409 (40%), Gaps = 61/409 (14%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G+D L T Y + + I T + +VG +GND++ G S
Sbjct: 681 TSGNDTLTATQ-AARPYYFN----------AGMGDDIIVGGTAKDFLVGGAGNDMLAGGS 729
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ F +GNDV +G +GLD + S + + + D +E+
Sbjct: 730 GDDTFIGGAGNDVINGGAGLDRVIFNFASSAASVGLSASGVTTITG-SEGTDAFRGIEQF 788
Query: 345 RFADQCIDSVNV-KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDS 401
F+D+ I++ + + Y S +D++ ++ HF E+G EGRD F +
Sbjct: 789 TFSDRTINNADASPLVDDVFYLLSNKDVLA----SGKDADDHFAEYGAREGRDPNAYFST 844
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 460
YL + D+ Y G KEGR+P A F Y+A + D+ A +
Sbjct: 845 KGYLAANSDVAQ----SGANPLTQYAQAGWKEGRDPSATFDNEFYLARNPDVKAAGLNP- 899
Query: 461 DLVQVGKDHFSNFGCEEGRFV------------TFDSYLYLGSYDDLR----NVFGSDRG 504
H+ +G EGR FD+ YL + D+ G
Sbjct: 900 ------LAHYIEYGQSEGRTTFAAVGRTADIKGGFDAEYYLLANGDVASVATAAGGDTFA 953
Query: 505 AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
A +H+ +G KEGR+P+A F Y+A++ D+ A + H+ +G++EGR
Sbjct: 954 FARQHFDNYGWKEGRDPNAIFDTKGYLAAYTDVAQAGVNP-------LGHYDTYGWKEGR 1006
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
F+ YL + D+ QH++ G+ E RA+ G
Sbjct: 1007 DPATDFDTSAYLQANPDVAQA----GIEPMQHFLQFGLVENRAVLSDGT 1051
Score = 94.8 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 18/150 (12%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLI----QVIGQDVFESMKHFYEFGLSEGRDIT-- 398
FA + Y + D+ G + +HF +G EGRD
Sbjct: 914 TFAAVGRTADIKGGFDAEYYLLANGDVASVATAAGGDTFAFARQHFDNYGWKEGRDPNAI 973
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ YL +Y D+ HY T+G KEGR+P F Y+ ++ D+ A
Sbjct: 974 FDTKGYLAAYTDVAQA----GVNPLGHYDTYGWKEGRDPATDFDTSAYLQANPDVAQAGI 1029
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ HF FG E R V D
Sbjct: 1030 EP-------MQHFLQFGLVENRAVLSDGTF 1052
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/404 (18%), Positives = 127/404 (31%), Gaps = 52/404 (12%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S +G + A + +I+ G GND + G + N+ GND G +G DT F+
Sbjct: 515 SDVGDTLDGL--AGNDIID---GRGGNDTLAGGAGNDAISGGLGNDRITGGAGNDTVFFN 569
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A V + + + L F + + N + +
Sbjct: 570 ASVDGSDNVDLGAGSDVANISLSTPGQIR----LSFTSAQVGNGNANDSNDMADQDGGLA 625
Query: 371 L---IQVIGQDVFESMKHFYEFG--LSEGRDITFDSYLYLG--SYDDLRNVFGSDRG--- 420
+ + + + F + G + G TFD + DL V
Sbjct: 626 VRLQAEGANDALTGPVSRFDDEGTTFTAGSGATFDVRDLVAGTQRGDLFEVVSLGTSGND 685
Query: 421 ------AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
AA +Y G+ + + + + A D G + G
Sbjct: 686 TLTATQAARPYYFNAGMGDDIIVGGTAKDFLVGGAGNDMLAGGSGDDTFIGGAGNDVING 745
Query: 475 CEEGRFVTFDSYLYLG----SYDDLRNVFGSDRGAAARHYITHGVKEGRNPD------AF 524
V F+ S + + GS+ A R + R +
Sbjct: 746 GAGLDRVIFNFASSAASVGLSASGVTTITGSEGTDAFRGIEQFTFSD-RTINNADASPLV 804
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNV 582
+ Y+ S++D++ + DA D HF+ +G EGR F+ YL + D+
Sbjct: 805 DDVFYLLSNKDVLASGKDADD-------HFAEYGAREGRDPNAYFSTKGYLAANSDVAQS 857
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
+ + Y G KEGR F + L+ KA
Sbjct: 858 GANPLTQ----YAQAGWKEGRD---PSATFDNEFYLARNPDVKA 894
>gi|110597459|ref|ZP_01385746.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
gi|110341003|gb|EAT59474.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
Length = 549
Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats.
Identities = 104/381 (27%), Positives = 156/381 (40%), Gaps = 44/381 (11%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH---- 76
YW + + R ++H L A W+ V +L+F + +
Sbjct: 54 AYWQSDYSRTNEPDASSHF------ALTATQIAAAGSVFQLWAAVANLSFTQVADTAGSV 107
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINF-DKADVWRY-------GIGKGTILSHNALHEI 128
D + S+ + + Y+ + + ADVW + ++ +HEI
Sbjct: 108 GDFRLAFSS---AVSGSWGWCYYPDDYWASAADVWINPAYATGSSWTNSSFNYYSLIHEI 164
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG---YCATPMV 185
GH LGL HPG+Y+ G G D L SVMSY +DAS TPMV
Sbjct: 165 GHGLGLKHPGNYS-GTSSSGPYLPANLDYRLYSVMSYNDWHKWYVDASQTIAVLPETPMV 223
Query: 186 SDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
DI A+Q +YGA GNN Y + PF +TI+D+GG D +D++ +D
Sbjct: 224 YDIAAIQYLYGANNSYQTGNNTYTFD---PAVPFYKTIWDAGGTDTIDISNFT-TDCTVD 279
Query: 245 LNTESWSSI----------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L S+SS+ N+ IA +E+V G +G+D + GNSA N G
Sbjct: 280 LRAGSYSSLHYVNRGNSSNYDGSNNLGIAFGVTLENVKGGTGSDTITGNSAANTITGGGG 339
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAII----VYDANEHKQDFLSDVERLRFADQC 350
ND +G G DT + S Y I ++ + A D LS VE +FAD
Sbjct: 340 NDTINGGDGSDTAIFSGNSSDYTITYDASSGVYTITDKRAGGEGSDHLSGVEHFQFADTT 399
Query: 351 IDSVNVKQRSILEYTASYEDL 371
+ N+ ++ D+
Sbjct: 400 QINTNIPTVTLFSPNDGAVDV 420
>gi|238783933|ref|ZP_04627950.1| Metalloprotease [Yersinia bercovieri ATCC 43970]
gi|238715172|gb|EEQ07167.1| Metalloprotease [Yersinia bercovieri ATCC 43970]
Length = 441
Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats.
Identities = 81/347 (23%), Positives = 126/347 (36%), Gaps = 34/347 (9%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------GYVCTPRYD 95
D+ N A+ ++ W+ V ++ F E + + G P
Sbjct: 69 DVFSFNKMQVIQAKKSMQSWADVANIYFTEAAGDESAYLGFYSYLQDNNRHGAAYHPNNL 128
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ +N +D + +H HEIGH LGL H + +
Sbjct: 129 ILSPIYLNSFSSD--GKKPTQSNYGAHILTHEIGHTLGLKHTH-------GAKNWPEEQQ 179
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
+ S+MSY Q S D +TP + DI AVQ +YG GN Y
Sbjct: 180 HTQQVSIMSYQSEQASGADYGGNSLSTPQLYDIAAVQYLYGPNLTTRTGNTAYGFNSNSD 239
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I ++D+GG D D + +N I LN S+S +GG N++IA
Sbjct: 240 RDFLTANTPTDKLIFCVWDAGGIDTFDFSGYTENQN-IYLNELSFSDVGGLVANISIAAD 298
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------- 318
VIE+ +G SGND ++GN +N+ +G D G G + F Y S
Sbjct: 299 VVIENAIGGSGNDKLVGNDVDNILTGGAGADHLWGDEGNNIFRYNRTSDSTSTSSDTIHD 358
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
++ + I ++ V R F+ Q + Y
Sbjct: 359 FKSDKDKIDLSPLLFGDRNIAMVNRFSFSGQTEIQQKYDAVRDITYL 405
>gi|254487953|ref|ZP_05101158.1| Ig family protein [Roseobacter sp. GAI101]
gi|214044822|gb|EEB85460.1| Ig family protein [Roseobacter sp. GAI101]
Length = 1075
Score = 240 bits (613), Expect = 5e-61, Method: Composition-based stats.
Identities = 109/344 (31%), Positives = 170/344 (49%), Gaps = 15/344 (4%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
PVY+ ++IAD+L + N + DV T L+ D+ L A+ A AL W+ V
Sbjct: 40 PVYSIDQIADYLTVGFWQDNNMSQRSFDVQTGDTLTVDLRALGTVAETTALRALDAWTAV 99
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
L F + S +DI F S+N+G + +E + +D W+ G G +
Sbjct: 100 SGLKFVQGSS-ADIVFSSANSGAYNSSTTMGTRIIESRVNISDSWQ---GYGDYYLQTFI 155
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPM 184
HEIGHALGL H G YNG + D + NDS+ T+VMSYF ++ +A+ + A+
Sbjct: 156 HEIGHALGLGHSGMYNGS-ASFASDAHFANDSWQTTVMSYFDQNENPNTNATRLFLASAQ 214
Query: 185 VSDIVAVQKIYGAPKG-SLGNNIYKIEVQQK------DSPFIQTIYDSGGDDLLDLTLIG 237
+ DI A+QK+YGAP + G++IY + + I D+GG D+++LT
Sbjct: 215 LGDIAAIQKLYGAPTSVATGDSIYGDSANTGQWGMELGTNWSVAIVDNGGTDVINLTSRT 274
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+DL E++S+I G N++I ++TVIE+ SG+D + GN A N +GND
Sbjct: 275 -HNQMLDLRAETYSNINGRTGNLSIGRNTVIENATTGSGHDYIFGNDAGNRISSGAGNDT 333
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G+ G D S + + + Y A + D ++D
Sbjct: 334 ILGNGGDDVLIGGQGSDILSGGVGADRFV-YAALDEAGDTVTDF 376
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + T I+ + G G+D++ G+ N+ + +GND G +G D A
Sbjct: 562 LYGMAGNDALIGGTGIDMLYGGDGDDILQGDDGNDRLYGGTGNDTLAGGAGNDQMRGEAG 621
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + D ++ D + + D D + + D
Sbjct: 622 DDQMDGGARNDTLYGQDGDDTIAG--GDGNDIVYGDLGDDDLRGNDGRDRLFGREGND 677
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 61/191 (31%), Gaps = 22/191 (11%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+NIY TI G+D L D + GG N ++ G E
Sbjct: 794 DNIYGDSGDD-------TILGGSGNDYLKGDAGDDQIDGGADNDKIYAESGNDTVAGGEG 846
Query: 259 NMTIAQHTVIESVVGS---------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ IA + + V G SGND V G + +G D DG +G D +
Sbjct: 847 DDYIAGGSGDDLVDGGAGTDRIYADSGNDTVSGGDGADYIKGGAGEDQIDGGAGTDRIYA 906
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ I ++ + +R+ IL + +
Sbjct: 907 ETGHDTVTGGDGDDYISGATGDDVLSGDAGN-DRVYGDSGDDLLDGGAGDDILNAGSGND 965
Query: 370 DLIQVIGQDVF 380
LI +G D+
Sbjct: 966 RLIGGMGADML 976
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 40/93 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + ++ + V G SG+D++ G + +++ SGND G G D +
Sbjct: 922 ISGATGDDVLSGDAGNDRVYGDSGDDLLDGGAGDDILNAGSGNDRLIGGMGADMLLGGSG 981
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ ++ ++A + +Q + +V +
Sbjct: 982 ADVFVFNTLDDAGDTISDMKLRQGDMIEVSNML 1014
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 23/142 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
+ +Y G+D L G ++ + + + G + + TIA
Sbjct: 590 QGDDGNDRLYGGTGNDTLAGGAGNDQMRGEAGDDQMDGGARNDTLYGQDGDDTIAGGDGN 649
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGND------------------VFDGSSGLDTFFYY 310
+ V G G+D + GN + F GND DG SG D
Sbjct: 650 DIVYGDLGDDDLRGNDGRDRLFGREGNDSLDGGADDDILDGGDGDNTVDGGSGNDKITTR 709
Query: 311 APSYLYKIYRFENAIIVYDANE 332
+ S + + + D N+
Sbjct: 710 SGSDIISGGDGNDRVGAGDGND 731
>gi|126741360|ref|ZP_01757036.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
gi|126717565|gb|EBA14291.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
Length = 644
Score = 240 bits (611), Expect = 8e-61, Method: Composition-based stats.
Identities = 104/401 (25%), Positives = 168/401 (41%), Gaps = 31/401 (7%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ + +A+ L YW + +++++ +I+ L Q++ARWA W V ++
Sbjct: 51 SLDDLANFLT-HGYWGGS--SRSFNTSGSNQITVNISGLTAAGQQLARWAFEAWEAVANI 107
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNALH 126
F ET + I F +++G + + + + W G + +H
Sbjct: 108 DFVETLGSAQITFDDNDSGAYASSSTSGTTILSSEVNVSTAWLANSGTTIDSYSFSTYVH 167
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMV 185
EIGHALGL H G YN G YGVD + NDS+ S+MSYF +++ +AS + M+
Sbjct: 168 EIGHALGLGHQGDYN-GNATYGVDETFSNDSWQVSIMSYFDQSENTTTNASRAALISTMM 226
Query: 186 SDIVAVQKIYGAPKG---SLGNNIYKIEVQQ-------------------KDSPFIQTIY 223
SDIVA+Q +YGAP + GN + + TIY
Sbjct: 227 SDIVAIQNLYGAPGTSSATAGNTTWGANTTLSGYMADAMNALASSRNSSVNGNSVAFTIY 286
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D+LDL+ + +DLN E++S + G N+ IA+ T+IE SGND ++GN
Sbjct: 287 DVDGYDILDLS-YNSTNDRVDLNGEAFSDVSGLIGNLGIARGTLIEEFRAGSGNDTIVGN 345
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
A N + + G D +G +G DT + + + + D + +
Sbjct: 346 DAANRIYGNGGTDTIEGGTGYDTLYGGSGNDSL-FGGSGRDSLRGDIGNDSLTGGTGDDT 404
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L D L A + + G D
Sbjct: 405 LYGGDGDDRLFGNTSLDTLYGGAGNDYISAGDGVDFVNGDA 445
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 51/164 (31%), Gaps = 17/164 (10%)
Query: 190 AVQKIYGAPKGSL------GNNIYKIEVQQK--DSPFIQTIYDSGGDD-----LLDLTLI 236
A +IYG + +Y ++ G+D D TL
Sbjct: 347 AANRIYGNGGTDTIEGGTGYDTLYGGSGNDSLFGGSGRDSLRGDIGNDSLTGGTGDDTLY 406
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + S ++ G N I+ ++ V G +GND + G S ++ + GND
Sbjct: 407 GGDGDDRLFGNTSLDTLYGGAGNDYISAGDGVDFVNGDAGNDTIHGRSGWDLLNGNDGND 466
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GS G DT + D L
Sbjct: 467 SIYGSQGDDTLNGGGDDDWLS----GGSAWDVLFGNDGNDTLYG 506
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 4/126 (3%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGY 256
++IY + + + SGG ++ G L S + G
Sbjct: 460 NGNDGNDSIYGSQGDDTLNGGGDDDWLSGGS---AWDVLFGNDGNDTLYGNFGSDVQSGG 516
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + T +S+ G GND + GN + +G+D+ G + DTF +
Sbjct: 517 AGNDQLFGGTGDDSLRGGDGNDTLQGNQGVDRLDGGAGDDLLRGGTLRDTFVFNTGYDND 576
Query: 317 KIYRFE 322
+I FE
Sbjct: 577 EINDFE 582
>gi|296533583|ref|ZP_06896151.1| glycerophosphodiester phosphodiesterase [Roseomonas cervicalis ATCC
49957]
gi|296266091|gb|EFH12148.1| glycerophosphodiester phosphodiesterase [Roseomonas cervicalis ATCC
49957]
Length = 690
Score = 240 bits (611), Expect = 8e-61, Method: Composition-based stats.
Identities = 91/374 (24%), Positives = 142/374 (37%), Gaps = 50/374 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + + G G+DV+ G +++ GND DG G DT P
Sbjct: 349 LTGGSGNDFLYGGEGDDIIEGGDGDDVLYGEQGDDMLIGGLGNDTLDGGEGRDTVVLSGP 408
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDL 371
Y + ++ L +E LRFAD + + Q L Y D+
Sbjct: 409 LASYSFDVVDG--LLQAVGPDGTTTLRAIELLRFADGTVALDAMAQGFDALSYALINADV 466
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
Q + H+ +FG EGRD + F + YL + D+ +HY+ +
Sbjct: 467 WQA----GVDLRAHYDQFGWREGRDPSGLFSTEAYLANNADVAAA----GINPLQHYLQY 518
Query: 430 GVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------- 481
G +EGR F +Y+A + D+ A D H+ G EGR
Sbjct: 519 GSQEGRLTSPWFDGRDYLARNADVAEAGVDP-------MLHYLTNGFLEGRVALFVIGRD 571
Query: 482 ----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 536
FD+ Y + D+ G D A HY +G EGR+ +A F+ Y+A + D+
Sbjct: 572 IGADAFDATFYRLANADVARA-GIDARA---HYEQYGRAEGRDANAYFEGETYLALNADV 627
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
A D H+ G+ EGRS F+ YL + + + H+
Sbjct: 628 AAAGVDP-------LAHYLADGWREGRSTPGEFDAQGYLAA----YADVAAAEINPLLHF 676
Query: 595 ITHGMKEGRALGIS 608
+ +G EGR
Sbjct: 677 LQYGAAEGRVPFFD 690
>gi|240138687|ref|YP_002963159.1| hypothetical protein MexAM1_META1p2085 [Methylobacterium extorquens
AM1]
gi|240008656|gb|ACS39882.1| hypothetical protein, putative 5'-nucleotidase domain
[Methylobacterium extorquens AM1]
Length = 2794
Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats.
Identities = 96/398 (24%), Positives = 164/398 (41%), Gaps = 52/398 (13%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T +L S S + H V++ G+ D + G + +++ S+
Sbjct: 2421 TAPAADARIQNLAARSDSVLARGVSRTGADGHDVLQ---GTPFADRLFGGAGDDIIVNSA 2477
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI-D 352
GND G G DT + + + E + +D +S ER F+D I
Sbjct: 2478 GNDFLSGGRGNDTLVF--NTSFASVTVTEAGSLTAITGPDGRDLVSGFERYLFSDATIVV 2535
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
+ L Y + +D+ Q ++ H+ ++G EGRD F + YL + +
Sbjct: 2536 NDGQPLVDDLFYLSRNKDVFQA----GQDADAHYAQYGAREGRDPNAFFSTKGYLAANPE 2591
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDH 469
+R + HY G KEGR+P F Y+A++ D+ A + H
Sbjct: 2592 VR----ASGANPLDHYEQAGWKEGRDPGVRFDNEFYLAANPDVKAAGLNP-------LAH 2640
Query: 470 FSNFGCEEGRFV------------TFDSYLYLGSYDDLRNVFG--SDRGAAARHYITHGV 515
+ G EGR + FD+ YL ++ D+ G AARH+ +G
Sbjct: 2641 YLAEGRAEGRAIHDAVGRSGDIRGGFDAEYYLLAHADVAQAAGTTDTFAFAARHFEQYGW 2700
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLY 572
+EGRNP+A F Y+A++ D+ A + H+ +G++EGR + F+ Y
Sbjct: 2701 QEGRNPNAVFDTKGYLAAYGDVKAAGLNP-------LTHYDQYGWKEGRDPSADFDSSTY 2753
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
L++Y D+ + QH++ +G+ EGR+ G
Sbjct: 2754 LSTYTDVAAA----KIDPMQHFLQYGLYEGRSTFADGT 2787
>gi|294677599|ref|YP_003578214.1| M10 family peptidase [Rhodobacter capsulatus SB 1003]
gi|3128317|gb|AAC16169.1| potential outer membrane secretion protein [Rhodobacter capsulatus
SB 1003]
gi|294476419|gb|ADE85807.1| peptidase, M10 family/hemolysin-type calcium-binding repeat family
protein [Rhodobacter capsulatus SB 1003]
Length = 1028
Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats.
Identities = 108/384 (28%), Positives = 151/384 (39%), Gaps = 27/384 (7%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+T ++ L+R Y+ Y + D T SF + + + AL WS V
Sbjct: 5 TFTEDQAVQQLIRG-YFGGYTYGWALDASRTLTYSF-AAAVTTAERALIETALDSWSAVA 62
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNA 124
+TF + I F +S G C + + A W YG G+
Sbjct: 63 GITFVRVASGGQIGFQNSAAGAYCAMSGTGTNMVSATVNVASSWFSNYGGTLGSYSYQTY 122
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATP 183
+HEIGHALGL H G+YNG + D Y NDS+ TSVMSYF + A+ Y TP
Sbjct: 123 VHEIGHALGLGHTGNYNGS-ARFATDALYANDSWQTSVMSYFAQTDNPNTGATHAYLLTP 181
Query: 184 MVSDIVAVQKIYGAPKG-SLGNNIYK-----------IEVQQKDSPFIQTIYDSGGDDLL 231
M DI A++ +YGAP GN Y + + T+ D+ G D L
Sbjct: 182 MAFDIAAMRALYGAPAAVHGGNTTYGSGSTAGDGLDYLATASHRANVAFTLMDTDGIDTL 241
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + IDL + S + G NM I TVIE V +G D + GN+A N
Sbjct: 242 DFSARA-EAARIDLTPGAISDLFGQRGNMVIYAGTVIEHVRSGAGADRITGNTAANRLAA 300
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYK-------IYRFENAIIVYDANEHKQDFLSD-VER 343
+GND G +G DT A + A I D + D V
Sbjct: 301 GAGNDTLAGGAGDDTLAGEAGDDRLAGEGGNDLLTGGAGADIFAFGTGFGSDTIEDLVAS 360
Query: 344 LRFADQCIDSVNVKQRSILEYTAS 367
+ + D + ++L A
Sbjct: 361 IDYVDLTAIAAIADWSALLALMAD 384
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 46/120 (38%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ I + D+GG+DL+ L + S +I N I+ +
Sbjct: 859 NDTLQGGAGIDAVTDTGGNDLVSLGAGDDSFTATGDSAASADTISAGAGNDRISAGAGND 918
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++G +GND + + N+ +GND+ G G D F + +I F + D
Sbjct: 919 LLLGEAGNDSLTAGAGNDRLTAGTGNDLMTGGLGNDVFIFATGDGADRITDFRIGVDDID 978
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++A ++++G G D + G + N+ +GND G +G DT ++
Sbjct: 432 LSLAGTAGRDTLLGGQGADTIDGGAGNDSITAGAGNDSVSGGAGNDTISLQEGDDIFADG 491
Query: 320 RFENAIIVYDANEHKQ 335
A +V+
Sbjct: 492 SDSGADVVWGGAGDDT 507
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 54/196 (27%), Gaps = 23/196 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + TI G D + + G + +G + T T +
Sbjct: 590 NDRIETGAGVDTILGGAGRDTI--SAGAGNDSVTGGADADRIDLGAGDDIFTDTADTGAD 647
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGND------------------VFDGSSGLDTFFYYA 311
+V+G GN+V+ + GND G +G D
Sbjct: 648 TVLGGLGNEVLTSLGGRDSLDGGEGNDSLTASAAGGALQGGLGNDTLQGGAGADVAADSG 707
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASY 368
+ L + ++ I + D + E L A L
Sbjct: 708 GNDLVDLGAGNDSYIASGDSAGNADTVRGGEGNDALSGAAGADSLDGGNGDDRLTGNDGN 767
Query: 369 EDLIQVIGQDVFESMK 384
+ ++ GQD +
Sbjct: 768 DTILGGAGQDSITAGA 783
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G T+ +++ G +GND + + N+ +GND G D F +
Sbjct: 433 SLAGTAGRDTLLGGQGADTIDGGAGNDSITAGAGNDSVSGGAGNDTISLQEGDDIFADGS 492
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
S ++ A + D L
Sbjct: 493 DSGADVVW--GGAGDDTLTSRGGADALHG 519
Score = 44.3 bits (103), Expect = 0.064, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 55/188 (29%), Gaps = 14/188 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ G+D + +L G + D + + G + T+ +
Sbjct: 458 NDSITAGAGNDSVSGGAGNDTI--SLQEGDDIFADGSDSGADVVWGGAGDDTLTSRGGAD 515
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---------SGLDTFFYYAPSYLYKIYR 320
++ G +G+D+++ + V G+D G +G D A + Y
Sbjct: 516 ALHGEAGDDLLVAGPSGCVLSGGLGDDTLQGGIAPTGSATAAGADVVSLGAGNDSYTGTG 575
Query: 321 FENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ D + + V+ + + A + + G
Sbjct: 576 DAATGGDSVSGGDGNDRIETGAGVDTILGGAGRDTISAGAGNDSVTGGADADRIDLGAGD 635
Query: 378 DVFESMKH 385
D+F
Sbjct: 636 DIFTDTAD 643
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 39/148 (26%), Gaps = 21/148 (14%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV------------ 280
L+L G L + +I G N +I +SV G +GND +
Sbjct: 432 LSLAGTAGRDTLLGGQGADTIDGGAGNDSITAGAGNDSVSGGAGNDTISLQEGDDIFADG 491
Query: 281 --------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + ++ G D G +G D PS + +
Sbjct: 492 SDSGADVVWGGAGDDTLTSRGGADALHGEAGDDLLVAG-PSGCVLSGGLGDDTLQGGIAP 550
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + + +
Sbjct: 551 TGSATAAGADVVSLGAGNDSYTGTGDAA 578
>gi|110681245|ref|YP_684252.1| VBCS repeat-containing protein [Roseobacter denitrificans OCh 114]
gi|109457361|gb|ABG33566.1| VCBS repeat domain protein [Roseobacter denitrificans OCh 114]
Length = 1301
Score = 237 bits (604), Expect = 6e-60, Method: Composition-based stats.
Identities = 103/363 (28%), Positives = 157/363 (43%), Gaps = 46/363 (12%)
Query: 38 HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFISSNNGYVCTPR 93
+R D L ++ R + + +V+ ++F ETS +DI F ++ G
Sbjct: 167 NRAGTDTNGLTAPRADLVRDVMDVFGEVLGISFVETSSSDASFTDIFFKDTDAGRAYANS 226
Query: 94 YDSRYFMEINF-DKADVWRYGIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
++ ++ + W G HE+GHALGL H G YNG + D
Sbjct: 227 TGFSAGIQYSWINIGQDWSGGTSTYNDYTLQTIFHEVGHALGLGHQGLYNGSG-SFPGDA 285
Query: 152 DYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVSDIVAVQKIYG----------APKG 200
D++NDS+ ++MSYF +++ + ASF + TPM D +A+Q IYG
Sbjct: 286 DFDNDSWQATMMSYFSQNENTTIPASFAFLQTPMAVDWIALQDIYGDQSFGGTNFGITNA 345
Query: 201 SLGNNIYKIEVQQKDSP-------------FIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
LG+ +Y S TI D+GG D LD + I+L
Sbjct: 346 FLGDTVYGFNTNISASTSNIWAEFATYANRTASTIVDAGGIDTLDFSGYS-ANQVINLTP 404
Query: 248 ES-------WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
S S+IGG N+T+A+ T+IE+ +G SG+D GN A+NVF + GND F+
Sbjct: 405 TSQFATAPSISNIGGLTGNLTLAEGTIIENAIGGSGSDTFFGNDASNVFRGNGGNDTFND 464
Query: 301 SSGLDTFFYYAPSYLYKI------YRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDS 353
S G DT++ A + Y F + D + + VE L F DQ
Sbjct: 465 SLGDDTYYGGAGTDTVDFLGLFSNYSFSISGTFLSVINVAMDLVENTVEFLSFDDQTFSF 524
Query: 354 VNV 356
N+
Sbjct: 525 QNI 527
>gi|229588355|ref|YP_002870474.1| putative protease [Pseudomonas fluorescens SBW25]
gi|229360221|emb|CAY47078.1| putative protease [Pseudomonas fluorescens SBW25]
Length = 495
Score = 236 bits (603), Expect = 7e-60, Method: Composition-based stats.
Identities = 94/414 (22%), Positives = 149/414 (35%), Gaps = 62/414 (14%)
Query: 7 VYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFD-----------------ITELN 48
T + +AD L R W + + LT + + LN
Sbjct: 40 SLTGKEVADRLTRTGHRWHDSNHNGR-TELTYEFSTVEPDSFKKDQIDSRNKARKFVPLN 98
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSD---IKFISSNNGYVCTPRYDSRYFMEINF- 104
++ R A E++ + +++F E + + + + G +P S +F +
Sbjct: 99 ARQKDYVRTAQQEYADIANISFTEKAGGGAEGHLIYNGYDTGSNVSPIRGSGFFPDPQGP 158
Query: 105 -DKADVWRYGIGKGTIL-----------------SHNALHEIGHALGLMHPGSYNGGYPV 146
VW + + N +HEIGH +GL HP G
Sbjct: 159 ERPGHVWMRNTDQASRFNEKEDGGFLEGFGDDIWRENLIHEIGHIVGLSHPH----GDSE 214
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GNN 205
DY+ + S+MSY P S + S G + M+ DI A+QK YGA + G+
Sbjct: 215 EEGLPDYQENWKNYSIMSYNTPLFSEAEDSGG-PVSLMIDDIAALQKTYGANHATRAGDT 273
Query: 206 IYKIEV---------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
Y D + ++D GG D LD + I+LN S SS+GG
Sbjct: 274 TYGFNSNSGREHSSLTSSDDKPLFAVWDGGGWDTLDFSGFS-QNQVINLNAGSLSSVGGL 332
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+N+ IA+ VIE G G +++IGN NV G DV G SG + A +
Sbjct: 333 SRNVGIAEGAVIEEARGGKGRNILIGNEVFNVLRGGPGEDVMYGGSGGAQMWGGAGPNTF 392
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ DF+S +++ + + S L S
Sbjct: 393 VFDGASSGK-----ANWVMDFVSGKDKIDLSGLSKKLGTLTFVSQLPLDHSKPQ 441
>gi|330898466|gb|EGH29885.1| serralysin [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 440
Score = 236 bits (602), Expect = 8e-60, Method: Composition-based stats.
Identities = 103/344 (29%), Positives = 157/344 (45%), Gaps = 35/344 (10%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + I F +G Y + + + A W + G +HEIGHALG
Sbjct: 5 TAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIHEIGHALG 61
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMVSDIVAVQ 192
L H G+YNG + + Y+ DS+ SVMSYF +++ +ASFGY ATPM++DIVA+Q
Sbjct: 62 LGHAGNYNGS-ATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPMLADIVAIQ 120
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPF------IQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+YG G+N Y ++ + TIYDSGG+D ++++ G +DL
Sbjct: 121 SLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGA-QTVDLR 179
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+E++SS+ G N+ IA+ TVIE+ + +G D +IGN+++N ++GND G G D
Sbjct: 180 SEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQGGDGNDR 239
Query: 307 FFYYAPSY----------------------LYKIYRFENAII-VYDANEHKQDFLSDVER 343
A S Y NA + V+DA D LS VER
Sbjct: 240 LMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNATLSVHDAQTSDVDTLSSVER 299
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
L F+D+ + Y A + + + H
Sbjct: 300 LSFSDRNASLDELLMAFHSRYGAFNAESDATVSLSFSTDLHHIA 343
>gi|318607889|emb|CBY29387.1| metalloprotease [Yersinia enterocolitica subsp. palearctica Y11]
Length = 413
Score = 236 bits (602), Expect = 1e-59, Method: Composition-based stats.
Identities = 82/358 (22%), Positives = 145/358 (40%), Gaps = 38/358 (10%)
Query: 26 YFIRYKPDVLTTHRLSFDI--TELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFI 82
F + P ++L DI + N A A+ S V ++ F E + ++I +
Sbjct: 40 SFTQDIPKKYHYYKLKDDIPTSPFNKTQIYQAGIAMQSISDVANIKFVEVNTTRANIPMV 99
Query: 83 SSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+++ GY P ++ + IN D + + +HEI HA+GL
Sbjct: 100 NAHFYNPTHVAGYGYYPNKNNLSPVCINADIQE--DITPSHLQYGNSVIVHEILHAIGLQ 157
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H G + S+MSY + S + + Y + P + DI A+Q +Y
Sbjct: 158 HTHDTAG-------------LTQQESIMSYSSEKHSGGNYAEYYVSMPQLYDIAALQYLY 204
Query: 196 GAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + GN+ Y I I+D+GG D LD + I+L S+S +G
Sbjct: 205 GPNMNTRTGNDTYTYSSDTP----IFCIWDAGGIDTLDFSDQT-QDQVINLTAGSFSDVG 259
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N++IA IE+ +G SG+D +IGN+ +N+ G D G +G + F Y+ +
Sbjct: 260 GLKANISIAFGVSIENAIGGSGDDKIIGNNTDNILTGGFGADEIWGGNGSNIFRYHKTTD 319
Query: 315 LYKI-------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ E I + + ++ V++ F+ + + + Y
Sbjct: 320 SNTTSADTLHDFNSEKDKIDLSPIIYSNEDIALVDKFNFSGRTEIIRKYDNTNDITYL 377
>gi|332163392|ref|YP_004299969.1| Peptidase M10 serralysin [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325667622|gb|ADZ44266.1| Peptidase M10 serralysin [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862188|emb|CBX72350.1| secreted protease C [Yersinia enterocolitica W22703]
Length = 413
Score = 235 bits (600), Expect = 2e-59, Method: Composition-based stats.
Identities = 82/358 (22%), Positives = 145/358 (40%), Gaps = 38/358 (10%)
Query: 26 YFIRYKPDVLTTHRLSFDI--TELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFI 82
F + P ++L DI + N A A+ S V ++ F E + ++I +
Sbjct: 40 SFTQDIPKKYHYYKLKDDIPTSPFNKTQIYQAGIAMQSISDVTNIKFVEVNTTRANIPMV 99
Query: 83 SSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+++ GY P ++ + IN D + + +HEI HA+GL
Sbjct: 100 NAHFYNPTHVAGYGYYPNKNNLSPVCINADIQE--DITPSHLQYGNSVIVHEILHAIGLQ 157
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H G + S+MSY + S + + Y + P + DI A+Q +Y
Sbjct: 158 HTHDTAG-------------LTQQESIMSYSSEKHSGGNYAEYYVSMPQLYDIAALQYLY 204
Query: 196 GAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + GN+ Y I I+D+GG D LD + I+L S+S +G
Sbjct: 205 GPNMNTRTGNDTYTYSSDTP----IFCIWDAGGIDTLDFSDQT-QDQVINLTAGSFSDVG 259
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N++IA IE+ +G SG+D +IGN+ +N+ G D G +G + F Y+ +
Sbjct: 260 GLKANISIAFGVSIENAIGGSGDDKIIGNNTDNILTGGFGADEIWGGNGSNIFRYHKTTD 319
Query: 315 LYKI-------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ E I + + ++ V++ F+ + + + Y
Sbjct: 320 SNTTSADTLHDFNSEKDKIDLSPIIYSNEDIALVDKFNFSGRTEIIRKYDNTNDITYL 377
>gi|167648839|ref|YP_001686502.1| serralysin [Caulobacter sp. K31]
gi|167351269|gb|ABZ74004.1| Serralysin [Caulobacter sp. K31]
Length = 727
Score = 235 bits (599), Expect = 2e-59, Method: Composition-based stats.
Identities = 112/521 (21%), Positives = 172/521 (33%), Gaps = 131/521 (25%)
Query: 4 IKPVYTTERIADHLLRDQY-WSNYFIRYK-----------------------------PD 33
KPV+T E+ + L R W+ + +
Sbjct: 50 GKPVFTIEQATEQLNRGGAGWTPGVVDHAVPRDGDVSVLNFGFHTAQSMFAEPYVYEEGG 109
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNN------ 86
L F E + AR A+ W ++ T E++ +DI F + N
Sbjct: 110 ELYGRTEYFGFAEFTEPQKAAAREAMASWDDLIAPTLVESAPEVADITFANYTNRPGTQA 169
Query: 87 ----GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
Y TP ++ + + +G H HE GHALGL HPG YN
Sbjct: 170 YAYLPYDYTPDNADLIAGDVWVSANQPSNFQLDEGLYGIHTLTHESGHALGLEHPGDYNA 229
Query: 143 GYP---VYGVDNDYENDSFLTSVMSYFMPQDSMMD------ASFGYCATPMVSDIVAVQK 193
Y + +Y DS S+MSYF ++ ++ Y +TP+V DI A+Q
Sbjct: 230 APGVTITYADNAEYYQDSRAYSIMSYFAASETGARHFDFNISTTVYASTPLVHDIAAIQA 289
Query: 194 IYGAPKGS-LGNNIYKIEVQQKDSPFIQT--------IYDSGGDDLLDLTLIGGVKNYID 244
IYGA + G+ Y + T I+D+GG+D LD + ID
Sbjct: 290 IYGADMTTRTGDTTYGFNSNAGRDSYDFTKTPAPVMAIWDAGGNDTLDASGY-HTDQIID 348
Query: 245 LNTESWSSIGG--------------------------------------------YEKNM 260
L S SSIGG N+
Sbjct: 349 LTPGSLSSIGGVTYDTAPSFEQVNANRAAAGYAPVALATYTSNMALLASNPVVGRLTDNV 408
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
IA IE+ +G SG+D +IGN+ N ++GND DG +G D + + +
Sbjct: 409 AIAYGATIENGIGGSGSDRLIGNAVGNTLTGNAGNDTLDGKAGADILYGGDGNDVLDGGA 468
Query: 321 FENAIIVYDANE-HKQDFLSD------------------------VERLRFADQCIDSVN 355
+ +I ++ + D L D VE LR + +
Sbjct: 469 GFDRMIGGAGDDRYIIDTLHDAIREMPNEGVDTVWSSVNYTLVPHVENLRLTGEAMIGTG 528
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEG 394
++++ L G D + E G
Sbjct: 529 NGLANVIDGNDISNKLSGEAGNDTLSGFGGVDYLEGGAGND 569
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 5/128 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G+ N ID N S + + G N T++ ++ + G +GND + G + +G D
Sbjct: 529 NGLANVIDGNDIS-NKLSGEAGNDTLSGFGGVDYLEGGAGNDSLFGGDGTDFLLGGAGAD 587
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G +G D A + +Y D++ DF+SD ER D N
Sbjct: 588 RLNGGAGFDILIGGAGNDVYAFDVS----AFPDSDGLSIDFVSDFERGDLFDFSALDANA 643
Query: 357 KQRSILEY 364
+
Sbjct: 644 TLEGDQAF 651
>gi|307152892|ref|YP_003888276.1| hypothetical protein Cyan7822_3046 [Cyanothece sp. PCC 7822]
gi|306983120|gb|ADN15001.1| hypothetical protein Cyan7822_3046 [Cyanothece sp. PCC 7822]
Length = 729
Score = 233 bits (593), Expect = 1e-58, Method: Composition-based stats.
Identities = 71/326 (21%), Positives = 125/326 (38%), Gaps = 47/326 (14%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSY 408
+ ++ + L TA Y + Q + H+Y+ G EGR + FD+ YL
Sbjct: 120 YGAAQGRKPNPLFDTAYYLQQNPEVAQSGVNPLAHYYQNGAREGRKPNPLFDTSYYLEQN 179
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGK 467
D+ HY+ G +GR P+ F + Y+ + ++ + +
Sbjct: 180 PDVAE----SGLNPLVHYLQEGGYQGRKPNPLFNSGYYLQQNPEVAQSGVNP-------L 228
Query: 468 DHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AF 524
H+ G +EGR FDS YL ++ HY+ G +EGR P+ F
Sbjct: 229 VHYLECGAQEGRKPNPLFDSGYYLQQNPEVA----HSGLNPLAHYLECGAREGRKPNSLF 284
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNV 582
+ Y+A + ++ + + H+ G EGR F+ D YL D+
Sbjct: 285 DSAYYLAQNPEVAQSGLNP-------LAHYLECGAREGRKPNPFFDGDYYLEQNPDVAEW 337
Query: 583 FGSDRSAAAQHYITHGMKEGR-ALGISGM---------QFKSVMNLSEKSRDKADLSLSF 632
HYI +G +GR A + + L ++ ++A + S+
Sbjct: 338 ----GDNPLAHYIDYGAYQGRLAWSLPNVMRIIQEESSVLSQTQKLINQTPNRALIFSSY 393
Query: 633 -DHKKVDLYTDYFGDGNYYDSDLYSM 657
H KV +Y GNY+ +++ +
Sbjct: 394 RSHPKVGIYCSSI--GNYFMAEMADL 417
>gi|254561286|ref|YP_003068381.1| hypothetical protein METDI2865 [Methylobacterium extorquens DM4]
gi|254268564|emb|CAX24521.1| hypothetical protein, putative 5'-nucleotidase domain
[Methylobacterium extorquens DM4]
Length = 2796
Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats.
Identities = 95/398 (23%), Positives = 163/398 (40%), Gaps = 52/398 (13%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T +L S S + H V++ G+ D + G + +++ S+
Sbjct: 2423 TAPAADARIQNLAARSDSVLARGVSRTGAEGHDVLQ---GTPFADRLFGGAGDDIIVNSA 2479
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI-D 352
G+DV G G DT + + + E + +D +S ER F+D I
Sbjct: 2480 GDDVLSGGRGNDTLVF--NTSFASVTVTEAGSLTAITGPDGRDLVSGFERYLFSDATIVV 2537
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
+ L Y + +D+ Q ++ H+ ++G EGRD F + YL + +
Sbjct: 2538 NDGQPLVDDLFYLSRNKDVFQA----GQDADAHYAQYGAREGRDPNAFFSTKGYLAANPE 2593
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDH 469
+R + Y G KEGR+P F Y+A++ D+ A + H
Sbjct: 2594 VR----ASGANPLDQYEQAGWKEGRDPGVRFDNEFYLAANPDVKAAGLNP-------LAH 2642
Query: 470 FSNFGCEEGRFV------------TFDSYLYLGSYDDLRNVFG--SDRGAAARHYITHGV 515
+ G EGR + FD+ YL ++ D+ G AARH+ +G
Sbjct: 2643 YLANGQAEGRAIHDAVGRSGDIRGGFDAEYYLLAHADVAQAAGTTDTFAFAARHFEQYGW 2702
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLY 572
+EGRNP+A F Y+A++ D+ A + H+ +G++EGR + F+ Y
Sbjct: 2703 QEGRNPNAVFDTKGYLAAYGDVKAAGLNP-------LTHYDQYGWKEGRDPSAGFDSSTY 2755
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
L++Y D+ + QH++ G+ EGR+ G
Sbjct: 2756 LSTYTDVAAA----KIDPMQHFLQDGLYEGRSTFADGT 2789
>gi|307945601|ref|ZP_07660937.1| serralysin [Roseibium sp. TrichSKD4]
gi|307771474|gb|EFO30699.1| serralysin [Roseibium sp. TrichSKD4]
Length = 951
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 99/331 (29%), Positives = 151/331 (45%), Gaps = 19/331 (5%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
+ +A L + SN +V ++++ L + +A AL W V L
Sbjct: 574 NDTLAYQLTNGYWESNGRTERSFNVAPGAVITYNHDGLASGVRHLATTALELWGDVTGLQ 633
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR--YGIGKGTILSHNALHE 127
F+ TS + I F + +G + + W YG + +HE
Sbjct: 634 FQYTSGSAQITFDDNYSGAYAYSYLSGTTITSSYINVSTAWTDYYGTALNSYSFQTYIHE 693
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMVS 186
+GHALGL H G+YNG + + NDS+ S+MSYF +++ +DAS+ TP ++
Sbjct: 694 VGHALGLGHAGNYNGS-ASFDPNVHLANDSWQASLMSYFSQTENTNVDASWALAVTPQMA 752
Query: 187 DIVAVQKIYGAP------------KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
D++AV+ +YG S G+ + +S TI D GG D L+ +
Sbjct: 753 DVLAVRNLYGTTGTTRTDDTTYGDNASSGDTF--ASLTAMNSSITYTIVDDGGIDTLNFS 810
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
IDLN E+ S++ G N+ IA+ TVIE+ + +GND +IGNSANN G
Sbjct: 811 NTS-ANQLIDLNAEATSNVRGLTGNVIIARGTVIENAISGNGNDTLIGNSANNHLDGGLG 869
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
D G+ G DTF + A S + FEN I
Sbjct: 870 ADTLTGNYGYDTFVFAAGSGNDTVTDFENGI 900
>gi|38455763|gb|AAR20883.1| alkaline protease [Pseudomonas aeruginosa]
Length = 459
Score = 232 bits (591), Expect = 2e-58, Method: Composition-based stats.
Identities = 74/358 (20%), Positives = 130/358 (36%), Gaps = 46/358 (12%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNP----------- 49
+ N YT + +LR+Q ++ L+ N
Sbjct: 12 LVNGHESYTVDEGGRQMLREQGTWQKAPGESVITISYSFLTKQNDFFNSPWKSRSDIYSL 71
Query: 50 --------NAQEVARWALGEWSKVVDLTFEETS-------IHSDIKFISSNNGYVCTPRY 94
A A+ +L WS V +L F + + + P
Sbjct: 72 GKFSFAFSQADRQAKLSLQSWSDVTNLHFVDGKQANQNDLTGGNFSSSVGGADFAFLPDV 131
Query: 95 D----SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--PVYG 148
+ S+ + IN + G HE+ H LGL HP Y+ G P Y
Sbjct: 132 ENSIKSQSWYLINSSYST--NVNPSNGNYGRQTLTHELNHTLGLSHPEDYHAGERDPTYA 189
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D Y D+ S + Q++ D Y + P++ I ++QKIYGA + + Y
Sbjct: 190 -DATYAEDTRKASTNMSWEEQNTGQDFKGAYSSAPLMGGIASLQKIYGANLTTRKGDTYV 248
Query: 209 ----------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
S + +++D+ G+ LD + I+ N ++ S + ++
Sbjct: 249 GFNSNTQRDFYSATSSSSKIVFSVWDAAGNQTLDFSGFT-QNQKINANEKALSEVNNLKR 307
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N+T+A +E+ +G SG+D++IGN NV + D+ G G + + A +
Sbjct: 308 NVTLAAEVTVENALGGSGSDLLIGNDVANVIKGGANGDILYGRLGANQLWGGANGANF 365
>gi|296532745|ref|ZP_06895427.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266938|gb|EFH12881.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 371
Score = 231 bits (588), Expect = 4e-58, Method: Composition-based stats.
Identities = 113/373 (30%), Positives = 171/373 (45%), Gaps = 21/373 (5%)
Query: 253 IGGYEKNMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IG + IA +S+ G +G+D + ++ GND +G G DT
Sbjct: 5 IGTPGNDRLIAPDARENDSIAGDAGDDFIEARGGDDRITPGPGNDRVEGGDGRDTVIVSG 64
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSILEYTASYE 369
++YR+ N ++ D L DVE ++F ++ + Y ASY
Sbjct: 65 DISQTEVYRYNNEGVLR--GPDGVDTLLDVEAVQFTGVGGTLEMSDANSFLSYSYIASYG 122
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR-GAAARHYIT 428
DL + G D +HF +FG EGR+ITF+ YL + D+ + G++ + ARHY+
Sbjct: 123 DLTEAYGADAGAGWRHFRDFGAVEGREITFNGNAYLAANTDVLSALGANADESGARHYLE 182
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+G EGR F AL Y AS+ +LI++F HF G EGR ++F+ Y
Sbjct: 183 YGRFEGRT-TEFAALSYTASYGELIDSFGTDTIAATA---HFVQEGFNEGRGISFNGLEY 238
Query: 489 LGSYDDLRNVFGSDRGA------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
+ SY DL + +G A HYI +G EGR F L+Y+AS+ D+I AF D
Sbjct: 239 VASYGDLIDAYGDAERPFDLGEDGAGHYIQYGRGEGRET-TFDGLQYMASYGDVIEAFRD 297
Query: 543 APDLVQ---AGKDHFSNFGYEEGR-SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ D G H+ G+ E R + FN Y + DL + A A H+I +G
Sbjct: 298 STDAGAYDTIGALHYIRDGFGEERVADRFNEQSYAAANGDLAEAGITSADALALHWIQYG 357
Query: 599 MKEGRALGISGMQ 611
++GRA +
Sbjct: 358 YEKGRAGAYDPVI 370
Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G E + ++F + YIAS+ DL A+ G HF +FG EGR +TF+ YL
Sbjct: 102 GTLEMSDANSFLSYSYIASYGDLTEAYGADAG---AGWRHFRDFGAVEGREITFNGNAYL 158
Query: 490 GSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ D+ + G++ + ARHY+ +G EGR + F AL Y AS+ +LI++F
Sbjct: 159 AANTDVLSALGANADESGARHYLEYGRFEGRTTE-FAALSYTASYGELIDSFGTD---TI 214
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD------RSAAAQHYITHGMKEG 602
A HF G+ EGR I+FN Y+ SY DL + +G A HYI +G EG
Sbjct: 215 AATAHFVQEGFNEGRGISFNGLEYVASYGDLIDAYGDAERPFDLGEDGAGHYIQYGRGEG 274
Query: 603 RALGISGMQF-KSVMNLSEKSRDKAD 627
R G+Q+ S ++ E RD D
Sbjct: 275 RETTFDGLQYMASYGDVIEAFRDSTD 300
>gi|110598202|ref|ZP_01386479.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
gi|110340216|gb|EAT58714.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
Length = 557
Score = 230 bits (585), Expect = 8e-58, Method: Composition-based stats.
Identities = 97/357 (27%), Positives = 135/357 (37%), Gaps = 49/357 (13%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFME 101
L AL W+ V L F E + D + S+ + YF +
Sbjct: 73 GLTAAQIAEVNHALQTWADVALLNFTEVADDPDSVGDFRLAFSS---AVDGYWGWCYFPD 129
Query: 102 INF-DKADVWRYGI-------GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ DVW + G+ ++ +HE GH LGL HPG+Y+ G +
Sbjct: 130 STWASAGDVWINPLFATGSSWTSGSFNYYSLIHETGHGLGLKHPGNYSEGSSSTEIYFPA 189
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFG-----YCATPMVSDIVAVQKIYGAPK-GSLGNNIY 207
D SVMSY Q D S TPMV DI A+Q +YG GN Y
Sbjct: 190 SLDYRNYSVMSYNDFQTWFFDTSLQEYIAVVPETPMVYDIEAIQYLYGTNNNYRTGNTTY 249
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-----------SIGGY 256
+ +PF ++I+DSGG D +D++ IDL S+S +
Sbjct: 250 TFD---PATPFYKSIWDSGGTDTIDISNFS-TDCTIDLTPGSYSTLHYINTGTRSDLYDG 305
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTF 307
N+ IA +E V G SGND + GN A N + SGND +G G D
Sbjct: 306 SNNLGIAFGVTLEMVNGGSGNDTIKGNRAGNSLYGGSGNDTVTGGAGDDILNGGDGTDKA 365
Query: 308 FYYAPSYLYKIYRFEN----AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y Y I I A+ D +S E+ +FAD + V +
Sbjct: 366 VYSGNFSDYSISYDGATDTYTITDKSADRDGSDRVSGFEQFQFADAVKADILVPTVT 422
>gi|218530329|ref|YP_002421145.1| 5'-nucleotidase domain protein [Methylobacterium chloromethanicum
CM4]
gi|218522632|gb|ACK83217.1| 5'-Nucleotidase domain protein [Methylobacterium chloromethanicum
CM4]
Length = 2796
Score = 230 bits (585), Expect = 9e-58, Method: Composition-based stats.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 49/363 (13%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+ D + G + +++ S+G+D G G DT + + + E +
Sbjct: 2455 DVLQGTPFADRLFGGAGDDIIVNSAGDDFLSGGRGNDTLVF--NTSFASVTVTEAGSLTA 2512
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNV-KQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+D +S ER F+D I + L Y + +D+ Q ++ H+
Sbjct: 2513 ITGPDGRDLVSGFERYLFSDATIVVNDGKPLVDDLFYLSRNKDVFQA----GQDADAHYA 2568
Query: 388 EFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 444
++G EGRD F + YL + ++R + Y G KEGR+P F
Sbjct: 2569 QYGAREGRDPNAFFSTKGYLAANPEVR----ASGANPLDQYEQAGWKEGRDPGVRFDNEF 2624
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------------TFDSYLYLGSY 492
Y+A++ D+ A + H+ G EGR + FD+ YL ++
Sbjct: 2625 YLAANPDVKAAGLNP-------LAHYLANGQAEGRAIHDAVGRSGDIRGGFDAEHYLLAH 2677
Query: 493 DDLRNVFG--SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQA 549
D+ G AARH+ +G +EGRNP+A F Y+A++ D+ A +
Sbjct: 2678 ADVAQAAGTTDTFAFAARHFEQYGWQEGRNPNAVFDTKGYLAAYGDVKAAGLNP------ 2731
Query: 550 GKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
H+ +G++EGR + F+ YL++Y D+ + QH++ G+ EGR+
Sbjct: 2732 -LTHYEQYGWKEGRDPSAGFDSSTYLSTYTDVAAA----KIDPMQHFLQDGLYEGRSTFA 2786
Query: 608 SGM 610
G
Sbjct: 2787 DGT 2789
>gi|123444226|ref|YP_001008194.1| metalloprotease [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122091187|emb|CAL14070.1| metalloprotease [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 492
Score = 229 bits (584), Expect = 1e-57, Method: Composition-based stats.
Identities = 86/407 (21%), Positives = 137/407 (33%), Gaps = 49/407 (12%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNG 87
LN R A S V ++ F E ++I + S G
Sbjct: 64 YYKSSDGIQAYSLNEAQIHQVRTATLATSDVANIKFIEAEDGVIANIPIANVLLEGSLGG 123
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
Y +P + + IN + + +HE GHALGL H G
Sbjct: 124 YAYSPNPGNLSPIFINAKIEE--NLAPTQSNYGGRVFMHEFGHALGLEHTHDSVG----- 176
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNI 206
+ TSVMSY +S + +TP + DI A+Q +YG +GN
Sbjct: 177 --------LTQQTSVMSYLSEFNSGAIYGGNFASTPQLHDISALQYLYGTNNRTRIGNTT 228
Query: 207 YKIEVQQK---------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
Y + ++D+GG+D D + I L +S IGG
Sbjct: 229 YGFNSNSNRDYFTATHASDKLVFCVWDAGGNDTFDFSGY-HQNQRITLTKRGFSDIGGLR 287
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N++IA VIE+ + SG+D + GN +NN G+D G G D F +
Sbjct: 288 GNVSIADKVVIENAITGSGDDEINGNRSNNTLNGGDGDDRLWGRVGNDRLFGGRGNDRLS 347
Query: 318 IYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + D L+ + F + D + + + + D +
Sbjct: 348 ----GGKGDDFLSGGAGNDRLAGGSGDDRLFGGRGADRMKGGEGCDIFQYRNSRDSTRKY 403
Query: 376 GQDVFESMKHFYEFGLSEGR-DITFDSYLYLGSYDDLRNVFGSDRGA 421
+F E + D++F + DL N F +
Sbjct: 404 TDT-------IIDFTSGEDKIDLSFIMAG--NNNIDLVNQFSVNGQT 441
>gi|238897624|ref|YP_002923303.1| putative metalloprotease, Serralysin and RTX domains [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465381|gb|ACQ67155.1| putative metalloprotease, Serralysin and RTX domains [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 540
Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats.
Identities = 98/434 (22%), Positives = 154/434 (35%), Gaps = 69/434 (15%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHR-LSFDITE------------LNPNAQEVARW 57
I + L W+ + L + + ++ N + +
Sbjct: 24 NEIKNTLTATYNWNGEKKYGQSVFLNFSFDIKKNPSKGSDKKVFGKPILFTQNQIQKVKL 83
Query: 58 ALGEWSKVVDLTFEE---TSIHSDIKFISSNN-----------GYVCTPRYDSRYFMEIN 103
L +S V ++ F E I+ I I N G P D + IN
Sbjct: 84 ILQFYSDVANVHFNEHKEEDINKKIHLIFFNYIKITPKSRFKRGAAYLPSRDGTSPIWIN 143
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
+ D + + HEIGHALGL H + Y N SVM
Sbjct: 144 AELED--NLNPNSKNLGNFTLNHEIGHALGLRHSH----------ISKSYTN---KISVM 188
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK-------- 214
SY+ + Y + P + DI +VQ +YGA + +GN IY
Sbjct: 189 SYYKE----FQYNGYYPSGPQMYDIASVQYLYGANLETRIGNTIYGFNSNSGRPYLSAEN 244
Query: 215 -DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
D P I ++D+GG D D + I+L + +S +GG + N++IA +IE+ +
Sbjct: 245 ADDPLIFCVWDAGGIDTFDFSGY-RQNQRINLKSSQFSDVGGLKNNVSIAYRVIIENAIS 303
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SG+D +IGN +NV G D+ G G D F + ++Y E A +
Sbjct: 304 GSGDDEIIGNEVDNVLRGGKGADLIYGEQGCDRLFGEEGND--RLYGGEGADKLVGGRGS 361
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
Q + + D + Q + L + L G D + E + G
Sbjct: 362 DQLWGGKDNDYLLGGEDQDFLFGGQGNDPLVGGRGRDQLWGEKGDDTLLGEMGDDWLSGG 421
Query: 391 LSE-------GRDI 397
+ GRDI
Sbjct: 422 IGSDKLTGGPGRDI 435
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 52/171 (30%), Gaps = 22/171 (12%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y E K ++ +D L +GG + G + N
Sbjct: 344 DRLYGGEGADKLVGGRGSDQLWGGKDNDYL----LGGEDQDF---------LFGGQGNDP 390
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-----YAPSYLY 316
+ + + G G+D ++G ++ G+D G G D F Y +
Sbjct: 391 LVGGRGRDQLWGEKGDDTLLGEMGDDWLSGGIGSDKLTGGPGRDIFVYQTCDDSSTLSTD 450
Query: 317 KIYRFENAI--IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
I FE I I + + V+R F Q + Y
Sbjct: 451 TICDFEVGIDKIDLSRITNNIKNIQFVDRFHFKGQTEIQQRHNSILNITYL 501
>gi|163732799|ref|ZP_02140244.1| VCBS repeat domain protein [Roseobacter litoralis Och 149]
gi|161394159|gb|EDQ18483.1| VCBS repeat domain protein [Roseobacter litoralis Och 149]
Length = 1301
Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats.
Identities = 100/391 (25%), Positives = 159/391 (40%), Gaps = 48/391 (12%)
Query: 38 HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFISSNNGYVCTPR 93
+R D L ++ R + + +V+ ++F ETS +DI F ++ G
Sbjct: 167 NRAGTDTNGLTAPRADLVRDVMDVFGEVLGISFVETSSSNADFTDIFFKDTDAGRAYANS 226
Query: 94 YDSRYFMEINF-DKADVWRYGIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
++ ++ + W G HE+GHALGL H G YNG + D
Sbjct: 227 TGFSAGVQYSWINIGQDWSGGTSTYNDYTLQTIFHEVGHALGLGHQGLYNGSG-SFPSDA 285
Query: 152 DYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVSDIVAVQKIYG----------APKG 200
D++NDS+ ++MSYF +++ + ASF + TPM D +A+Q +YG
Sbjct: 286 DFDNDSWQATMMSYFSQNENTTIPASFAFLQTPMAVDWIALQDMYGDQSSGGTNFGISNA 345
Query: 201 SLGNNIYKIEVQQKDSP-------------FIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
LG+ +Y + TI D+ G D LD + I+L
Sbjct: 346 FLGDTVYGFNTNISANTSNIWAEFATYANRTASTIVDAAGIDTLDFSGYS-ANQLINLTP 404
Query: 248 ES-------WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
S S+IGG N+T+A+ T+IE+ +G SG+D GN A+NVF + GND F+
Sbjct: 405 TSQFATAPSISNIGGLTGNLTLAEGTIIENAIGGSGSDTFFGNDASNVFRGNGGNDTFND 464
Query: 301 SSGLDTFFYYAPSYLYKI------YRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDS 353
S G DT++ + + Y F + + + + VE L F DQ
Sbjct: 465 SLGDDTYYGGSGTDTVDFLGLFSNYSFSISGTFLSVINVAMNLVENTVEFLSFDDQTFSF 524
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N+ D D +
Sbjct: 525 QNILDGLGSNAAPVASD--DAFATDEASPLA 553
>gi|254471059|ref|ZP_05084462.1| secreted protease C [Pseudovibrio sp. JE062]
gi|211960201|gb|EEA95398.1| secreted protease C [Pseudovibrio sp. JE062]
Length = 592
Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats.
Identities = 97/398 (24%), Positives = 155/398 (38%), Gaps = 36/398 (9%)
Query: 5 KPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSFD------ITELNPNAQEVARW 57
K Y A LLR WS P +T + +
Sbjct: 138 KAYYDGNMGAGALLRPGLSWSGP---GTPATVTYGFRENNNGVEDTFAHVTDAQIAAIEG 194
Query: 58 ALGEWSKVVDLTFEETSIHS---DIKFISSNNGYVCTPRYDSRYFM---EINFDKADVWR 111
L +S+V +++F + D + SN Y+ E + + DVW
Sbjct: 195 VLASYSEVANISFARVNPEGFTDDATILFSNYHSTTDGAGAYAYYPGSAEADAYEGDVWL 254
Query: 112 YG-------IGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGVDNDYENDSFLTS 161
+ G+ +HE+GHA+GL HPG YN G Y + D+ S
Sbjct: 255 NTNSVSTDELPTGSYSHFAVMHEVGHAVGLAHPGDYNAGPGVRITYDDHAQFRQDTQQYS 314
Query: 162 VMSYFMPQDSMMDASFG-YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQ------- 212
VMSYF ++ + +G + T M DI+A+Q++YG + + +Y
Sbjct: 315 VMSYFDESNADSNLGYGGFPDTLMPLDILALQQLYGVNTTTRADDTVYGYNSNAGGVYDF 374
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ P TI+D+GG+D +D++ G V I L S+S++GG N+ IA + VIE+ +
Sbjct: 375 SEGMPSALTIWDAGGNDTIDMSGAGKVNQMISLIDGSFSNVGGGLSNLAIAYNAVIENAI 434
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS GND +IGN+A N +GND G+ G D + + ++ A +
Sbjct: 435 GSGGNDTIIGNAAGNTLTGKAGNDTLIGNGGKDKLIGGNGHDTLR-GGSGSDVLKGGAGD 493
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
D S ++L + D
Sbjct: 494 DTLDGGSGADKLIAGAGDDTLTGGSGSDNFCFFNVGGD 531
>gi|218532711|ref|YP_002423527.1| heme peroxidase [Methylobacterium chloromethanicum CM4]
gi|218525014|gb|ACK85599.1| Animal heme peroxidase [Methylobacterium chloromethanicum CM4]
Length = 2342
Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats.
Identities = 87/350 (24%), Positives = 139/350 (39%), Gaps = 52/350 (14%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ +G + NN F ++ ND F+G SG D + + V D
Sbjct: 2006 IFVGGAENNTFTGTARNDSFNGGSGTDRAILNFAFGAALVSVAADGATVITG-PDGSDTF 2064
Query: 339 SDVERLRFADQCIDSVN-VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+E +F+D+ ID+ + L Y + Y D+ ++ H+ E+G EGRD
Sbjct: 2065 RGIEVYQFSDRTIDNADGSPLVDDLFYLSRYGDVAAA----GIDADTHYAEYGFREGRDP 2120
Query: 398 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
F + YL + D+R HY +G +EGR+P F Y A++ D+
Sbjct: 2121 NAFFSTTGYLAANSDVRGA----GINPLTHYDQYGFREGRDPGVNFDNEAYYAANPDVQA 2176
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFV--------------TFDSYLYLGSYDDLR---- 496
A + H+ +G EGR FD+ YL D+
Sbjct: 2177 AGLNP-------LRHYLEYGQGEGRSADEAVGRVADLSAAQGFDAEFYLLGNLDVAEAAI 2229
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G A HY +G+ EGR+P+A F Y+ ++ D+ A + H+
Sbjct: 2230 AAGGDSFAFALNHYSRYGIAEGRDPNALFDTDGYLDAYADVQAAGINP-------LTHYI 2282
Query: 556 NFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+G EGR SI F+ YL++ D+ HY+ +G+ EGR
Sbjct: 2283 QYGAREGRDPSIEFDTTAYLSANQDVQAA----GLNPMLHYLQYGLYEGR 2328
Score = 97.1 bits (240), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVI----GQDVFESMKHFYEFGLSEGRDIT--FDS 401
+ D + Y D+ + G ++ H+ +G++EGRD FD+
Sbjct: 2201 GRVADLSAAQGFDAEFYLLGNLDVAEAAIAAGGDSFAFALNHYSRYGIAEGRDPNALFDT 2260
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAP 460
YL +Y D+ G + HYI +G +EGR+P F Y+++++D+ A +
Sbjct: 2261 DGYLDAYADV-QAAGIN---PLTHYIQYGAREGRDPSIEFDTTAYLSANQDVQAAGLNP- 2315
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYL 487
H+ +G EGR D+
Sbjct: 2316 ------MLHYLQYGLYEGRLPQSDASF 2336
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Query: 252 SIGGYEKNMTIAQHT-------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ IA T +++ G++GND++ G N+ +G+D DG +G
Sbjct: 1578 NTFNGTPGDDIADGTSGFFGLGANDTLNGNAGNDILNGAGGNDTLNGGAGDDRLDGGTGT 1637
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
D + P + + ++V D D LS +E LRFA V +
Sbjct: 1638 DVAVFAGPVGNFALGSSGTNLVVTDLTGAEGTDTLSTIETLRFAGANYTVVAGTAGN 1694
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A + + Y N + A D F + Y +Y
Sbjct: 2208 AAQGFDAEFYLLGNLDVAEAAIAAGGDSFAFALNHYSRYGIAEGRDPNALFDTDGYLDAY 2267
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHY 426
D+ + H+ ++G EGRD + FD+ YL + D++ HY
Sbjct: 2268 ADVQAA----GINPLTHYIQYGAREGRDPSIEFDTTAYLSANQDVQAA----GLNPMLHY 2319
Query: 427 ITHGVKEGRNPDA 439
+ +G+ EGR P +
Sbjct: 2320 LQYGLYEGRLPQS 2332
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 11/143 (7%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ GND+++ ++ + +G+D + G+D F A + + +
Sbjct: 950 TIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADFL 1009
Query: 330 ANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLI-QVIGQDV--FESMK 384
D + L F +Q D + + + +D + G DV
Sbjct: 1010 HGNEGNDVIHGGSGLSLLFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEGD 1069
Query: 385 HFYEFGLS------EGRDITFDS 401
+ E G E ++ F+S
Sbjct: 1070 DWLEGGQRFDSLSGENSELFFNS 1092
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 15/136 (11%)
Query: 220 QTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSS----IGGYEKNMTIAQHTVIES 270
I+ GDD ++ GG + I N + + G E N I + +
Sbjct: 967 DAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADFLHGNEGNDVIHGGSGLSL 1026
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENA 324
+ G+ GND ++ F +G+D G SG D + EN+
Sbjct: 1027 LFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEGDDWLEGGQRFDSLSGENS 1086
Query: 325 IIVYDANEHKQDFLSD 340
+ +++ D L+
Sbjct: 1087 ELFFNSTIIGHDVLNG 1102
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 9/143 (6%)
Query: 218 FIQTIYDSGGDDLLDLTLIG-GVKNYIDLNTE--------SWSSIGGYEKNMTIAQHTVI 268
+ ++ GDD++ G +++ N S + G + N I
Sbjct: 983 GVDKVFGGAGDDIITNAGTDIGEADFLHGNEGNDVIHGGSGLSLLFGNQGNDFIVTGPDG 1042
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +G+D V+G S +V + G+D +G D+ + + ++
Sbjct: 1043 KEAFAGTGDDFVLGGSGGDVLLGNEGDDWLEGGQRFDSLSGENSELFFNSTIIGHDVLNG 1102
Query: 329 DANEHKQDFLSDVERLRFADQCI 351
+ + D S + + + I
Sbjct: 1103 GSGDTDYDGESGDDIMFQNSEGI 1125
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 18/130 (13%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI----------- 281
T+ G N I ++ +I G + I ++ V G +G+D++
Sbjct: 949 FTIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADF 1008
Query: 282 --GNSANNVFFESSGNDVFDGSSGLDTFFYY-----APSYLYKIYRFENAIIVYDANEHK 334
GN N+V SG + G+ G D A + + +
Sbjct: 1009 LHGNEGNDVIHGGSGLSLLFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEG 1068
Query: 335 QDFLSDVERL 344
D+L +R
Sbjct: 1069 DDWLEGGQRF 1078
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 14/149 (9%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G+ I +N+ +IGG E N I +++ G +G+D + + F +G+D+
Sbjct: 936 GIAESIRVNSNEHFTIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDI 995
Query: 298 -------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
G+ G D + L N IV + + + + +
Sbjct: 996 ITNAGTDIGEADFLHGNEGNDVIHGGSGLSLL-FGNQGNDFIVTGPDGKEAFAGTGDDFV 1054
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + LE ++ L
Sbjct: 1055 LGGSGGDVLLGNEGDDWLEGGQRFDSLSG 1083
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 64/210 (30%), Gaps = 38/210 (18%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTIAQ-- 264
+ + +GG+D L+ G + +D T + + G N +
Sbjct: 1599 GANDTLNGNAGNDILNGAGGNDTLNG---GAGDDRLDGGTGTDVAVFAGPVGNFALGSSG 1655
Query: 265 -HTVIESVVGSSGNDVVIG--------------------NSANNVFFESSGNDVFDGSSG 303
+ V+ + G+ G D + N+ N ++G+ G SG
Sbjct: 1656 TNLVVTDLTGAEGTDTLSTIETLRFAGANYTVVAGTAGNNAGLNGANGAAGSQAVFGLSG 1715
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT A S + + I + D + A D VN
Sbjct: 1716 NDTLNGGAASDHLVGGQGNDTI----RGDAGGDTIYWT-----AGDGRDLVNGDTTPTN- 1765
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
A D +++IG E+ + + E
Sbjct: 1766 -IAGSVDTMKIIGDTSSETFRIYTRAAALE 1794
>gi|218528172|ref|YP_002418988.1| heme peroxidase [Methylobacterium chloromethanicum CM4]
gi|218520475|gb|ACK81060.1| Animal heme peroxidase [Methylobacterium chloromethanicum CM4]
Length = 2342
Score = 224 bits (571), Expect = 4e-56, Method: Composition-based stats.
Identities = 86/350 (24%), Positives = 138/350 (39%), Gaps = 52/350 (14%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ +G + NN F ++ ND F+G G D + + V D
Sbjct: 2006 IFVGGAENNTFTGTARNDSFNGGGGTDRAILNFAFGAALVTVAADGATVITG-PDGSDTF 2064
Query: 339 SDVERLRFADQCIDSVN-VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+E +F+D+ ID+ + L Y + Y D+ ++ H+ E+G EGRD
Sbjct: 2065 RGIEAYQFSDRTIDNADGSPLVDDLFYLSRYGDVAAA----GIDADTHYAEYGFREGRDP 2120
Query: 398 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
F + YL + D+R HY +G +EGR+P F Y A++ D+
Sbjct: 2121 NAFFSTTGYLAANSDVRGA----GINPLTHYDQYGFREGRDPGVNFDNEAYYAANPDVQA 2176
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFV--------------TFDSYLYLGSYDDLR---- 496
A + H+ +G EGR FD+ YL D+
Sbjct: 2177 AGLNP-------LRHYLEYGQGEGRSADEAVGRVADLGAAQGFDAEFYLLGNLDVAEAAI 2229
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G A HY +G+ EGR+P+A F Y+ ++ D+ A + H+
Sbjct: 2230 AAGGDSFAFALNHYSRYGIAEGRDPNALFDTDGYLDAYADVQAAGINP-------LTHYI 2282
Query: 556 NFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+G EGR SI F+ YL++ D+ HY+ +G+ EGR
Sbjct: 2283 QYGAREGRDPSIEFDTTAYLSANQDVQAA----GLNPMLHYLQYGLYEGR 2328
Score = 97.1 bits (240), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVI----GQDVFESMKHFYEFGLSEGRDIT--FDS 401
+ D + Y D+ + G ++ H+ +G++EGRD FD+
Sbjct: 2201 GRVADLGAAQGFDAEFYLLGNLDVAEAAIAAGGDSFAFALNHYSRYGIAEGRDPNALFDT 2260
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAP 460
YL +Y D+ G + HYI +G +EGR+P F Y+++++D+ A +
Sbjct: 2261 DGYLDAYADV-QAAGIN---PLTHYIQYGAREGRDPSIEFDTTAYLSANQDVQAAGLNP- 2315
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYL 487
H+ +G EGR D+
Sbjct: 2316 ------MLHYLQYGLYEGRLPQSDASF 2336
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Query: 252 SIGGYEKNMTIAQHT-------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ IA T +++ G++GND++ G N+ +G+D DG +G
Sbjct: 1578 NTFNGTPGDDIADGTSGFFGLGANDTLNGNAGNDILNGAGGNDTLNGGAGDDRLDGGTGT 1637
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
D + P + + ++V D D LS +E LRFA V +
Sbjct: 1638 DVAVFAGPVGNFALGSSGTNLVVTDLTGAEGTDTLSTIETLRFAGANYTVVAGTAGN 1694
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 46/134 (34%), Gaps = 11/134 (8%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + + Y N + A D F + Y +
Sbjct: 2207 GAAQGFDAEFYLLGNLDVAEAAIAAGGDSFAFALNHYSRYGIAEGRDPNALFDTDGYLDA 2266
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
Y D+ + H+ ++G EGRD + FD+ YL + D++ H
Sbjct: 2267 YADVQAA----GINPLTHYIQYGAREGRDPSIEFDTTAYLSANQDVQAA----GLNPMLH 2318
Query: 426 YITHGVKEGRNPDA 439
Y+ +G+ EGR P +
Sbjct: 2319 YLQYGLYEGRLPQS 2332
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 11/143 (7%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ GND+++ ++ + +G+D + G+D F A + + +
Sbjct: 950 TIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADFL 1009
Query: 330 ANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLI-QVIGQDV--FESMK 384
D + L F +Q D + + + +D + G DV
Sbjct: 1010 HGNEGNDVIHGGSGLSLLFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEGD 1069
Query: 385 HFYEFGLS------EGRDITFDS 401
+ E G E ++ F+S
Sbjct: 1070 DWLEGGQRFDSLSGENSELFFNS 1092
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 15/136 (11%)
Query: 220 QTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSS----IGGYEKNMTIAQHTVIES 270
I+ GDD ++ GG + I N + + G E N I + +
Sbjct: 967 DAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADFLHGNEGNDVIHGGSGLSL 1026
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENA 324
+ G+ GND ++ F +G+D G SG D + EN+
Sbjct: 1027 LFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEGDDWLEGGQRFDSLSGENS 1086
Query: 325 IIVYDANEHKQDFLSD 340
+ +++ D L+
Sbjct: 1087 ELFFNSTIIGHDVLNG 1102
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 9/143 (6%)
Query: 218 FIQTIYDSGGDDLLDLTLIG-GVKNYIDLNTE--------SWSSIGGYEKNMTIAQHTVI 268
+ ++ GDD++ G +++ N S + G + N I
Sbjct: 983 GVDKVFGGAGDDIITNAGTDIGEADFLHGNEGNDVIHGGSGLSLLFGNQGNDFIVTGPDG 1042
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +G+D V+G S +V + G+D +G D+ + + ++
Sbjct: 1043 KEAFAGTGDDFVLGGSGGDVLLGNEGDDWLEGGQRFDSLSGENSELFFNSTIIGHDVLNG 1102
Query: 329 DANEHKQDFLSDVERLRFADQCI 351
+ + D S + + + I
Sbjct: 1103 GSGDTDYDGESGDDIMFQNSEGI 1125
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 18/130 (13%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI----------- 281
T+ G N I ++ +I G + I ++ V G +G+D++
Sbjct: 949 FTIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADF 1008
Query: 282 --GNSANNVFFESSGNDVFDGSSGLDTFFYY-----APSYLYKIYRFENAIIVYDANEHK 334
GN N+V SG + G+ G D A + + +
Sbjct: 1009 LHGNEGNDVIHGGSGLSLLFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEG 1068
Query: 335 QDFLSDVERL 344
D+L +R
Sbjct: 1069 DDWLEGGQRF 1078
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 14/149 (9%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G+ I +N+ +IGG E N I +++ G +G+D + + F +G+D+
Sbjct: 936 GIAESIRVNSNEHFTIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDI 995
Query: 298 -------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
G+ G D + L N IV + + + + +
Sbjct: 996 ITNAGTDIGEADFLHGNEGNDVIHGGSGLSLL-FGNQGNDFIVTGPDGKEAFAGTGDDFV 1054
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + LE ++ L
Sbjct: 1055 LGGSGGDVLLGNEGDDWLEGGQRFDSLSG 1083
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 64/210 (30%), Gaps = 38/210 (18%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTIAQ-- 264
+ + +GG+D L+ G + +D T + + G N +
Sbjct: 1599 GANDTLNGNAGNDILNGAGGNDTLNG---GAGDDRLDGGTGTDVAVFAGPVGNFALGSSG 1655
Query: 265 -HTVIESVVGSSGNDVVIG--------------------NSANNVFFESSGNDVFDGSSG 303
+ V+ + G+ G D + N+ N ++G+ G SG
Sbjct: 1656 TNLVVTDLTGAEGTDTLSTIETLRFAGANYTVVAGTAGNNAGLNGANGAAGSQAVFGLSG 1715
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT A S + + I + D + A D VN
Sbjct: 1716 NDTLNGGAASDHLVGGQGNDTI----RGDAGGDTIYWT-----AGDGRDLVNGDTTPTN- 1765
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
A D +++IG E+ + + E
Sbjct: 1766 -IAGSVDTMKIIGDTSSETFRIYTRAAALE 1794
>gi|238623416|emb|CAS06702.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 288
Score = 217 bits (553), Expect = 5e-54, Method: Composition-based stats.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 36/280 (12%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 9 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 68
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 69 LQKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGES 128
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 129 WYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 188
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 189 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTAD 248
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
S I +++D GG+D L+ + I+L
Sbjct: 249 RDYYSATSASSKLIFSVWDGGGNDTLEFSGFT-QNQKINL 287
>gi|149185554|ref|ZP_01863870.1| hypothetical protein ED21_21054 [Erythrobacter sp. SD-21]
gi|148830774|gb|EDL49209.1| hypothetical protein ED21_21054 [Erythrobacter sp. SD-21]
Length = 960
Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats.
Identities = 99/387 (25%), Positives = 166/387 (42%), Gaps = 24/387 (6%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKP--DVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+ ++I+++L W + + + + ++FD++ L+ + + R +L W
Sbjct: 335 SVDQISEYL--SSRWFDDMGQQAGGWALDASRTITFDLSGLDTSLHDTVRVSLAAWGDAA 392
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+TF E + + ++F++ R F+E D G T +
Sbjct: 393 GITFVEAAGGA-MQFVTGAENDASVTRVGG--FIESATVTIDPATPGFASETRAYQVVMQ 449
Query: 127 EIGHALGLMHPGSYNGG-YPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASFGYCA--- 181
E+G ALGL H G YN G Y Y D Y NDS + +VMS F +++ AS GY +
Sbjct: 450 EVGFALGLGHAGQYNNGQYVSYRAHDLVYLNDSNMLTVMSGFDNSSNVLLASQGYSSFDA 509
Query: 182 -TPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKD-------SPFIQTIYDSGGDDLLD 232
TPM++D+ A+Q IYGAP G++ Y D + T+ DS G D LD
Sbjct: 510 ITPMMADVAAIQAIYGAPTETRTGDDTYGFNSTAGDLYDAAVTTNAAYTVVDSAGVDTLD 569
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ I+L + ++GG N++IA TVIE+ +G SGND V GN N+
Sbjct: 570 YSQHA-QSQVINLVSGRLMNVGGMTGNVSIAAGTVIENAIGGSGNDFVRGNDVANLIQGL 628
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND G G DT L IY ++ + + F + + + D
Sbjct: 629 AGNDTIRGLGGNDTVEGGEGDDL--IYGNNGNDLLSAVSGFNRIFGNAGDDVILGGSGFD 686
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + +D + +
Sbjct: 687 KIFGGPGNDQMFGGAGDDFVMAWDGNN 713
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 52/172 (30%), Gaps = 10/172 (5%)
Query: 217 PFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
TI GG+D + D + G N + ++ I G + I + + +
Sbjct: 629 AGNDTIRGLGGNDTVEGGEGDDLIYGNNGNDLLSAVSGFNRIFGNAGDDVILGGSGFDKI 688
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G GND + G + ++ GN+ +G G D + + ++
Sbjct: 689 FGGPGNDQMFGGAGDDFVMAWDGNNHMEGGLGSDVMVGGRGND--TLLGGDDHGWDKLRG 746
Query: 332 EHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L ++L L + + G D+
Sbjct: 747 GDGDDVLIAGWGNDQLTGGTGNDWMDGGGAHDFLNGKEGNDTMFGGRGTDIL 798
Score = 42.0 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 18/118 (15%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGDD L GG + + + + G N + + + G GND + G
Sbjct: 735 GGDDHGWDKLRGGDGDDVLIAGWGNDQLTGGTGNDWMDGGGAHDFLNGKEGNDTMFGGRG 794
Query: 286 ------------------NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++ GND+ G G D F + + I FE+ +
Sbjct: 795 TDILWGGDGDDIIDGGLHDDRINGEQGNDLLTGGGGADVFVFNNYAGFDTITDFESGV 852
>gi|197284189|ref|YP_002150061.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681676|emb|CAR40761.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 654
Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats.
Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 17/231 (7%)
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
G+ + H +HE+GH+LGL H Y + DS SVMSY P D
Sbjct: 280 GSFVYHTFIHELGHSLGLFHIWEYILNEKHKVL------DSIKYSVMSYKCPDIKDADFG 333
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQQK---------DSPFIQTIYDSG 226
Y T M+ DI+ +Q +YG + NN Y + + I+D+G
Sbjct: 334 GLYPMTFMLVDILLLQYLYGENMTTRLENNTYGFNSNTGRAAYSLNSIEDKLVSCIWDAG 393
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D LD +L V I+LN +S IGG N++IA T+IE+ +G G+D +IGN +
Sbjct: 394 GIDTLDFSLYT-VNQVINLNEGCFSDIGGLRSNISIAYKTIIENAIGGKGDDTLIGNPFD 452
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N GND+F G G D F+ + + + + + D ++ D+
Sbjct: 453 NNLIGGDGNDLFYGGDGNDLFYGGSGNDVIYGELGNDVLYGDDGDDMLIDY 503
>gi|67922217|ref|ZP_00515731.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Crocosphaera watsonii WH 8501]
gi|67855920|gb|EAM51165.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Crocosphaera watsonii WH 8501]
Length = 670
Score = 216 bits (551), Expect = 7e-54, Method: Composition-based stats.
Identities = 90/409 (22%), Positives = 164/409 (40%), Gaps = 58/409 (14%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD----- 78
+ Y I + + + + + + + AL +S + ++ F+E ++
Sbjct: 256 NYYDIDGDSVNVDGNLATL-LQPFSEDTTKFIVDALKLYSDIANIQFQEVDETANGGEGG 314
Query: 79 -IKFI----------SSNNGYVCTPRYDSRYFMEINFDK--ADVW----RYGIGKGTILS 121
+ F S G TP + NFDK D+W GT +
Sbjct: 315 TLNFGYAFLTDQMGMSDAAGLAYTPSSLLEFPYSPNFDKKIGDIWIDRNETNFKPGTDVF 374
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+HEIGHALGL HP + G + G ++YE ++MSY + + +
Sbjct: 375 FTIIHEIGHALGLEHPHETSDGDQIVGFKDNYE-----YTIMSYNESKLNP----GVFPR 425
Query: 182 TPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
TP + D+ A+Q +YG + G++IY E + F+QTI+D+GG+D +
Sbjct: 426 TPQILDVAAIQYLYGVNNNTRSGDDIYSWEDNEN---FMQTIWDTGGNDTISAAKQSNE- 481
Query: 241 NYIDLNTESWSSIG-------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
IDL +++IG N+ I + +IE++ G G+D +IGN+ +N +
Sbjct: 482 VTIDLAAG-YANIGLNNKTYKPARSNLQIPVNVIIENIKGGQGDDTLIGNNIDNRLEGNG 540
Query: 294 GNDVFDGSSGLDTFFYYAP-----------SYLYKIYRFENAIIVYDANEHK--QDFLSD 340
GND +G+ G D +Y Y++ I++ D L +
Sbjct: 541 GNDTLEGNGGNDFIDGGEGEDTAIFSDAPQNYDYEVIDNNQIKIIHARGSESVQTDILIN 600
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+E L F D + + + + T + ++ + + +F
Sbjct: 601 IENLNFLDTNLTVHTLTAQKFYQATNQQGKVADLLKHNSGSIFQQIIDF 649
>gi|218438236|ref|YP_002376565.1| hypothetical protein PCC7424_1250 [Cyanothece sp. PCC 7424]
gi|218170964|gb|ACK69697.1| hypothetical protein PCC7424_1250 [Cyanothece sp. PCC 7424]
Length = 849
Score = 216 bits (551), Expect = 7e-54, Method: Composition-based stats.
Identities = 72/323 (22%), Positives = 129/323 (39%), Gaps = 53/323 (16%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLR 412
Y Y D+++ + + ++G EGR + FDS YL Y ++
Sbjct: 245 PNPLFDSSYYLQQYPDVVE----SGVNPLADYLDYGAREGRKPNPLFDSSYYLLQYPNVA 300
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ G + HY+ G +EGR P+ F + Y+ + D+ + + H+
Sbjct: 301 EM-GIN---PLAHYLLSGAREGRKPNPLFDSSYYLLQYSDVAESGVNP-------LAHYL 349
Query: 472 NFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALE 528
G EGR FDS YL Y D+ Y+ +G +EGR P+ F +
Sbjct: 350 LSGAREGRKPNPLFDSSYYLQQYPDVVESG----VNPLADYLDYGAREGRKPNSLFNSSY 405
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSD 586
Y+ + D++ + + H+ ++G EGR F+ YL Y D+ G
Sbjct: 406 YLQQYPDVVESGVNP-------LAHYLDYGALEGRKPNPWFDSGYYLQQYPDV----GEM 454
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE-----------KSRDKADLSLSFDH- 634
HY+ +G EGR L K++M S+ ++ +K + ++
Sbjct: 455 GINPLAHYLDYGAYEGR-LAWPLPTIKAIMQESKQLSSQTQKLIDQTLNKPLVFSTYSSI 513
Query: 635 KKVDLYTDYFGDGNYYDSDLYSM 657
K+ +Y GNY+ +++ +
Sbjct: 514 PKIGIYCSSL--GNYFMAEMADL 534
Score = 188 bits (476), Expect = 4e-45, Method: Composition-based stats.
Identities = 67/282 (23%), Positives = 108/282 (38%), Gaps = 37/282 (13%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLG 406
Q + + S L T Y I + + + H+ + G EGR + FDS YL
Sbjct: 83 QRRNLARLIMESGLFDTGYYWQQNPEIQKAGLDPLGHYLDHGGLEGRKPNPLFDSSYYLQ 142
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQV 465
Y D+ HY+ G +EGR P+ F + Y+ + D+ + +
Sbjct: 143 QYSDVAE----SGVNPLAHYLLSGAREGRKPNPLFDSSYYLQQYPDVAESGVNP------ 192
Query: 466 GKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
H+ G EGR FDS YL Y D+ Y+ +G +EGR P+
Sbjct: 193 -LAHYLLSGAREGRKPNPLFDSSYYLQQYPDVAESG----VNPLADYLDYGAREGRKPNP 247
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F + Y+ + D++ + + + ++G EGR F+ YL Y ++
Sbjct: 248 LFDSSYYLQQYPDVVESGVNP-------LADYLDYGAREGRKPNPLFDSSYYLLQYPNVA 300
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKS 622
+ HY+ G +EGR F S L + S
Sbjct: 301 EM----GINPLAHYLLSGAREGRK---PNPLFDSSYYLLQYS 335
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 18/142 (12%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FD 400
+ Y Y D+++ + + ++G EGR F+
Sbjct: 347 HYLLSGAREGRKPNPLFDSSYYLQQYPDVVE----SGVNPLADYLDYGAREGRKPNSLFN 402
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
S YL Y D+ HY+ +G EGR P+ F + Y+ + D+ +
Sbjct: 403 SSYYLQQYPDVVE----SGVNPLAHYLDYGALEGRKPNPWFDSGYYLQQYPDVGEMGINP 458
Query: 460 PDLVQVGKDHFSNFGCEEGRFV 481
H+ ++G EGR
Sbjct: 459 -------LAHYLDYGAYEGRLA 473
>gi|307826097|ref|ZP_07656309.1| glycosyl transferase family 2 [Methylobacter tundripaludum SV96]
gi|307732835|gb|EFO03700.1| glycosyl transferase family 2 [Methylobacter tundripaludum SV96]
Length = 1802
Score = 216 bits (551), Expect = 8e-54, Method: Composition-based stats.
Identities = 71/306 (23%), Positives = 113/306 (36%), Gaps = 42/306 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y D+ + H+ G +EGR+ FDS YL D+
Sbjct: 607 YLEQNPDVAAA----GVNPLAHYLSKGAAEGRNPNPWFDSRWYLEQNPDVAAA----GLN 658
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
HY++ G EGRNP+ F + Y+ + D+ A + H+ + G EGR
Sbjct: 659 PLAHYLSRGAAEGRNPNPLFDSRWYLEKNPDVAEAEINP-------LVHYLSNGAIEGRN 711
Query: 481 VT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
+ FDS YL D+ HY++ G EGRNP+ F + Y+ + D+
Sbjct: 712 PSPLFDSRWYLEQNPDVAAAG----LNPLAHYLSRGAAEGRNPNPLFDSRWYLEQNPDVA 767
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
A + H+ + G EGR+ F+ YL D+ H+I
Sbjct: 768 AAGLNP-------LVHYLSKGAAEGRNPNPWFDSRWYLEQNPDVAEA----GLNPLVHFI 816
Query: 596 THGMKEGRALGISGMQFKSVMNLSEKSRDKA----DLSLSFDHKKVDLYTDYFGDGNYYD 651
G +EGR + ++ ++ SFD KV + + +Y
Sbjct: 817 RSGAEEGRQPKPQPFRDMKILCEHLLRINRKQFGLLGFESFDTPKVSIIIPVYNQVHYTL 876
Query: 652 SDLYSM 657
L S+
Sbjct: 877 QCLESI 882
Score = 204 bits (518), Expect = 5e-50, Method: Composition-based stats.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 42/287 (14%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYL 403
A+Q Y D+ + S+ H+ G EGR+ F+S
Sbjct: 437 IAEQTELITGSNVFISAWYLEQNPDVTEA----GINSLAHYLSKGAVEGRNPNPLFNSRW 492
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDL 462
YL D+ G + HY++ G EGRNP+ F + Y+ + D+ A +
Sbjct: 493 YLEQNPDVAEA-GIN---PLVHYLSKGAAEGRNPNFLFDSRWYLEQNPDVAEAEINP--- 545
Query: 463 VQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
H+ + EGR + FDS YL D+ HY++ G EGRN
Sbjct: 546 ----LVHYLSNAAIEGRNPSPLFDSRWYLEQNPDVAAAG----LNPLTHYLSAGTVEGRN 597
Query: 521 PDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
P+ F Y+ + D+ A + H+ + G EGR+ F+ YL
Sbjct: 598 PNLWFDCCWYLEQNPDVAAAGVNP-------LAHYLSKGAAEGRNPNPWFDSRWYLEQNP 650
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
D+ HY++ G EGR F S L EK+ D
Sbjct: 651 DVAAA----GLNPLAHYLSRGAAEGRN---PNPLFDSRWYL-EKNPD 689
>gi|146309556|ref|YP_001190021.1| serralysin [Pseudomonas mendocina ymp]
gi|145577757|gb|ABP87289.1| Serralysin [Pseudomonas mendocina ymp]
Length = 1134
Score = 216 bits (551), Expect = 8e-54, Method: Composition-based stats.
Identities = 94/302 (31%), Positives = 134/302 (44%), Gaps = 34/302 (11%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRY 94
T S I L+ N + R AL +WS V +L+F E S + G +
Sbjct: 63 WTGSNSSNFIYSLSSNQESAVRSALAQWSSVANLSFTEVSDTAGGTVGDLRFGGYKLIDW 122
Query: 95 DSRYF---MEINFDKADVWRY------GIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
D+ F + DVW G+ LHEIGHALGL HP +G
Sbjct: 123 DTAAFAFLPGASPLAGDVWIGPVTNEVNPSGGSYDYLTFLHEIGHALGLKHPFEASGSS- 181
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGN 204
Y + Y D +VMSY D + PM+ DI A+Q IYG+ G+
Sbjct: 182 NYVLRGAY--DDVRYTVMSYNDTYDFL-------PTGPMLYDIAAMQYIYGSNDTWQTGD 232
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN----- 259
N+Y + + +TI+D+GG+D +D + I+LN+ +SSIG N
Sbjct: 233 NVYSWDAN---ARIFETIWDAGGNDTIDASNQS-AGVVINLNSGEFSSIGQSIYNYATGA 288
Query: 260 -----MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+TIA +VIE+ +GS D +IGNSA+NV G DV G +G DT++ P+
Sbjct: 289 GRNNFLTIAYGSVIENAIGSDYKDTLIGNSADNVLDGGKGEDVLRGGAGNDTYYVDLPTG 348
Query: 315 LY 316
Sbjct: 349 SD 350
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 59/172 (34%), Gaps = 16/172 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++ Y +++ ++ + + ++ G D + L + + E
Sbjct: 933 GDDTYIVDLMANNALEDRVVENANEGIDTIVLRGGSALP-----KAATIVLANNVENLDA 987
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-- 319
++ ++ G++ N+++IGN NN GND G G DT + ++
Sbjct: 988 SGTGSIALNLTGNAANNLLIGNQGNNTLNGGDGNDTLIGMGGFDTLTGGRGADTFRFALT 1047
Query: 320 ----RFENAIIVYDANEHKQDFLS----DVERLRFADQCIDSVNVKQRSILE 363
++ D D + D ER F + D+ +
Sbjct: 1048 WLGMNSGPDAVITDFRRLDGDKIQLQGEDAERFSFVGRTFDTGATGSHQLRF 1099
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 13/189 (6%)
Query: 203 GNNIYKIEVQQKDS---PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ Y +++ +++ ++ +Y+ G+D + L + + + E
Sbjct: 598 GDDTYIVDLTARNTLEDSVLENLYE--GNDTIQLRGGNVALATV----TAIALANNVENL 651
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
A T ++ G+ N+++IGN+A+N+ +G D G G DT+
Sbjct: 652 DASATGTTRLNLTGNVLNNILIGNAADNLLNGGAGADRLIGGDGNDTYVVDNLGDEVIEQ 711
Query: 320 RFENAIIVYDANEHKQDFLSDVERL----RFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
E +V A + E + + + L A+ L +
Sbjct: 712 AGEGTDLVQVAIATAGGTYTLGEHVENATLTNKVAFNLTGNALSNTLVGNAANNVLDGGL 771
Query: 376 GQDVFESMK 384
G DV
Sbjct: 772 GADVMNGGA 780
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 61/194 (31%), Gaps = 18/194 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPF-IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ Y +++ + T Y G D + L T +
Sbjct: 334 GGAGNDTYYVDLPTGSDFYDRVTEYAGEGYDKVVLRGTS---------TGFFGRSFALAN 384
Query: 259 NM----TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N+ V +++G++ + +IGN+ NN+ +G D G +G DT+
Sbjct: 385 NVEEVDASQTGAVALTLLGNNSANRIIGNAGNNLLNGGAGADTMIGGAGNDTYVVDHLGD 444
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERL----RFADQCIDSVNVKQRSILEYTASYED 370
E +V A + + + + V + L A+
Sbjct: 445 EVIEQVGEGIDLVQVAIATAGGTYTLGDHVENATLTNSVSFNLVGNTLSNTLVGNAANNL 504
Query: 371 LIQVIGQDVFESMK 384
L G DV
Sbjct: 505 LDGGAGADVMNGGA 518
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDL------NTESWSSIGGYEKNMTI 262
T+ G+D + +G V IDL ++G + +N T+
Sbjct: 420 NGGAGADTMIGGAGNDTYVVDHLGDEVIEQVGEGIDLVQVAIATAGGTYTLGDHVENATL 479
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++VG++ ++ ++GN+ANN+ +G DV +G +G DT+
Sbjct: 480 TNSVSF-NLVGNTLSNTLVGNAANNLLDGGAGADVMNGGAGNDTYVVDDIGDQIIDSAGI 538
Query: 323 NAIIVYDANEHKQDF 337
+ ++ + D
Sbjct: 539 DTVLASISYTLGNDL 553
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 76/254 (29%), Gaps = 75/254 (29%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-------------------GGV 239
G GN+ Y ++ TI DS G D + ++ G
Sbjct: 777 NGGAGNDTYIVD------DVGDTIIDSAGIDTVRASIAYTLGKGLENLVLTGSHAVSGTG 830
Query: 240 KNYIDLNTESWSS----IGGYEKNMTI---AQHTVIESVVGS------------------ 274
++ S ++ + G N T A TVIE G
Sbjct: 831 NALANILDGSQNNAANELRGLGGNDTYIVGAGDTVIEEANGGIDLVQAYVSYTLGDHVEN 890
Query: 275 ---SGNDVV--IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--- 326
G++ + GN NV + G++V DG G+DT Y + N +
Sbjct: 891 LSLLGSEALNGTGNGLANVLTGNDGSNVLDGGGGVDTLRGGKGDDTYIVDLMANNALEDR 950
Query: 327 VYDANEHKQDFLS-----------------DVERLRFADQCIDSVNVKQRSILEYTASYE 369
V + D + +VE L + ++N+ + +
Sbjct: 951 VVENANEGIDTIVLRGGSALPKAATIVLANNVENLDASGTGSIALNLTGNAANNLLIGNQ 1010
Query: 370 DLIQVIGQDVFESM 383
+ G D +++
Sbjct: 1011 GNNTLNGGDGNDTL 1024
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 49/286 (17%), Positives = 88/286 (30%), Gaps = 60/286 (20%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
Y + + EN + SV S+ + +++ + G A ++ + G
Sbjct: 464 AGGTYTLGDHVENATLTNSV-SFNLVGNTLSNTLVGNAANNLLDGGAGADVM----NGGA 518
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDL----LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ Y ++ I DS G D + TL ++N L +E+ + G
Sbjct: 519 GNDTYVVD------DIGDQIIDSAGIDTVLASISYTLGNDLENLSLLGSEALNGTGNGLA 572
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-- 316
N+ + GN +NV G D G G DT+ +
Sbjct: 573 NV-------------------ITGNDGSNVLDGGGGVDTLRGGKGDDTYIVDLTARNTLE 613
Query: 317 ----KIYRFENAIIVYDANEHKQDFLS------DVERLRFADQCID------------SV 354
+ N I ++ +VE L + +
Sbjct: 614 DSVLENLYEGNDTIQLRGGNVALATVTAIALANNVENLDASATGTTRLNLTGNVLNNILI 673
Query: 355 NVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDIT 398
++L A + LI G D V +++ EG D+
Sbjct: 674 GNAADNLLNGGAGADRLIGGDGNDTYVVDNLGDEVIEQAGEGTDLV 719
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 4/160 (2%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D+ GD++++ G + + T + G + V ++ G++ ++ ++
Sbjct: 700 VVDNLGDEVIEQAGEGTDLVQVAIATAGGTYTLGEHVENATLTNKVAFNLTGNALSNTLV 759
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN+ANNV G DV +G +G DT+ ++A I +
Sbjct: 760 GNAANNVLDGGLGADVMNGGAGNDTYIVDDVGD----TIIDSAGIDTVRASIAYTLGKGL 815
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E L S + + + ++ G +
Sbjct: 816 ENLVLTGSHAVSGTGNALANILDGSQNNAANELRGLGGND 855
>gi|317447655|emb|CBJ55059.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 287
Score = 214 bits (546), Expect = 3e-53, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 106/275 (38%), Gaps = 35/275 (12%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 12 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 71
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 72 LQKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGES 131
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 132 WYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 191
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 192 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTAD 251
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
S I +++D GG+D LD + +
Sbjct: 252 RDYYSATSASSKLIFSVWDGGGNDTLDFSGFTQNQ 286
>gi|317447661|emb|CBJ55062.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 284
Score = 214 bits (545), Expect = 4e-53, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 106/275 (38%), Gaps = 35/275 (12%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 10 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 69
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 70 LQKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGES 129
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 130 WYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 189
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 190 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTAD 249
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
S I +++D GG+D LD + +
Sbjct: 250 RDYYSATSASSKLIFSVWDGGGNDTLDFSGFTQNQ 284
>gi|238623352|emb|CAS06670.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 279
Score = 214 bits (545), Expect = 4e-53, Method: Composition-based stats.
Identities = 70/274 (25%), Positives = 105/274 (38%), Gaps = 35/274 (12%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 6 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 65
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 66 LQKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSARKGES 125
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 126 WYLINKDYEVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 185
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 186 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTAD 245
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
S I +++D GG+D LD +
Sbjct: 246 RDFYSATSASSKLIFSVWDGGGNDTLDFSGFSQN 279
>gi|238623376|emb|CAS06682.1| alkaline metalloprotease [Pseudomonas sp. W38a]
Length = 290
Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 107/278 (38%), Gaps = 42/278 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFD-----------ITELNP 49
N KP +T ++ ADHLLR+ + + K D+ T S ++ N
Sbjct: 12 VNGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASQATMNKHGITGFSQFNT 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF-- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 72 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYHQS 131
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDY 153
+ + HEIGH LGL HPG YN G D DY
Sbjct: 132 GLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADY 191
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYK 208
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+ Y
Sbjct: 192 GQDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGANYSTRAGDTTYG 251
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 252 FNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 289
>gi|238623358|emb|CAS06673.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 281
Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats.
Identities = 70/274 (25%), Positives = 105/274 (38%), Gaps = 35/274 (12%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 8 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 67
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 68 LQKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGES 127
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 128 WYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 187
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 188 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTAD 247
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
S I +++D GG+D LD +
Sbjct: 248 RDFYSATSASSKLIFSVWDGGGNDTLDFSGFSQN 281
>gi|238623356|emb|CAS06672.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 281
Score = 213 bits (543), Expect = 5e-53, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 35/272 (12%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 10 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 69
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 70 LQKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGES 129
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 130 WYLINKDYEVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 189
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 190 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTAD 249
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
S I +++D GG+D LD +
Sbjct: 250 RDFYSATSASSKLIFSVWDGGGNDTLDFSGFS 281
>gi|260436045|ref|ZP_05790015.1| glycosyl hydrolase, BNR repeat [Synechococcus sp. WH 8109]
gi|260413919|gb|EEX07215.1| glycosyl hydrolase, BNR repeat [Synechococcus sp. WH 8109]
Length = 1782
Score = 213 bits (543), Expect = 7e-53, Method: Composition-based stats.
Identities = 104/380 (27%), Positives = 160/380 (42%), Gaps = 51/380 (13%)
Query: 9 TTERIADHLLRDQYWSN-------YFIRYKPDVLTTHRLSF-DITELNPNAQEVARWALG 60
T + +A++L YW+ + + KP++ + D ++ + A
Sbjct: 46 TLDELANYL-ESGYWNAQGRSTRKFNLASKPNLYYNTTGNTKDSNGVSSERSNLIEEAFK 104
Query: 61 EWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK-GT 118
+ + + F++T + +D +F +++G + A W G G
Sbjct: 105 LLASTLGINFQKTNAAGADFRFGDNDSGAYARTWTSEGEVTYSEINIASSWHSGSTSLGD 164
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASF 177
LHEIGHALGL H G+YN Y D D+ NDS+ +S+MSYF ++ +DAS
Sbjct: 165 YYFQTTLHEIGHALGLGHLGNYNFS-ANYSYDADFINDSWQSSMMSYFDQTDNTSIDASK 223
Query: 178 GYCATPMVSDIVAVQKIYG-----APKGSLGNNIYKIEVQQKDSP-------------FI 219
Y +TPMV+D +A+ +YG + IY + ++
Sbjct: 224 VYLSTPMVADWIALDDLYGQYGFGINNAFTEDTIYGFDTNIGETTSLVFNKLKDLIPTTA 283
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTES-------WSSIGGYEKNMTIAQHTVIESVV 272
TI D GG D LDL+ IDL S+IGG N++ A T IESV+
Sbjct: 284 YTIVDGGGSDTLDLSGFAAT-QLIDLRPSDKYATNIYASNIGGKIGNLSFAPGTFIESVI 342
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY---D 329
G SG D GN+ANN FDG G DT + Y +I+V D
Sbjct: 343 GGSGADTFRGNNANNN---------FDGRDGDDTALFNGELSDYSFNLDGQSIVVSDLRD 393
Query: 330 ANEHKQDFLSDVERLRFADQ 349
+ QD L+++E + F
Sbjct: 394 GSPDGQDTLTNIENIDFNGT 413
>gi|238623372|emb|CAS06680.1| alkaline metalloprotease [Pseudomonas sp. Z57b]
Length = 282
Score = 213 bits (543), Expect = 7e-53, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 104/279 (37%), Gaps = 44/279 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H ++ ++ N
Sbjct: 5 VNGKPSFSVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASSATMNKHGIT-GFSQFN 63
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 64 TQQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYHQ 123
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ + HEIGH LGL HPG YN G D D
Sbjct: 124 SGLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 183
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 184 YGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 243
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 244 GFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 282
>gi|238793278|ref|ZP_04636905.1| Metalloprotease [Yersinia intermedia ATCC 29909]
gi|238727446|gb|EEQ18973.1| Metalloprotease [Yersinia intermedia ATCC 29909]
Length = 404
Score = 213 bits (543), Expect = 7e-53, Method: Composition-based stats.
Identities = 84/379 (22%), Positives = 135/379 (35%), Gaps = 50/379 (13%)
Query: 63 SKVVDLTFEET--SIHSDIKFIS-----SNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
S V ++ F E + ++I + S GY P D+ + IN +
Sbjct: 5 SDVANIKFIEAENDVVANIPITNALLEGSLGGYAYRPNPDNLSPIFINAKIEE--NLAPT 62
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
+ +HE GHALGL H G + TSVMSY S
Sbjct: 63 QSNYGGRVFMHEFGHALGLEHTHDSMG-------------LTQKTSVMSYLSEFYSGAIY 109
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQK---------DSPFIQTIYDS 225
+ +TP + DI+A+Q +YG +GN Y + ++D+
Sbjct: 110 GNNFASTPQLHDILALQYLYGTNNRTRIGNTTYGFNSNSNRDYFTATHASDKLVFCVWDA 169
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D D + I L +S IGG N++IA VIE+ + SG+D + GN +
Sbjct: 170 GGNDTFDFSGY-HQNQRITLTKRGFSDIGGLRGNVSIADKVVIENAITGSGDDEINGNRS 228
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VER 343
NN G+D G G D F + + + D L+ +
Sbjct: 229 NNTLNGGDGDDRLWGREGNDRLFGGRGNDRLS----GGKGDDFLSGGAGNDRLAGGSGDD 284
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR-DITFDSY 402
F + D + + + + D Q +F E + D++F
Sbjct: 285 RLFGGRGADRMKGGEGRDIFQYRNSRDSTQKYTDT-------IIDFTSGEDKIDLSFIMA 337
Query: 403 LYLGSYDDLRNVFGSDRGA 421
+ DL N F ++
Sbjct: 338 G---NNIDLVNQFSANGQT 353
>gi|238623360|emb|CAS06674.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 283
Score = 213 bits (542), Expect = 8e-53, Method: Composition-based stats.
Identities = 70/274 (25%), Positives = 105/274 (38%), Gaps = 35/274 (12%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 10 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGFATRGLGTFSQFSS 69
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 70 LQKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGES 129
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 130 WYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 189
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE---- 210
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 190 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTAD 249
Query: 211 -----VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
S I +++D GG+D LD +
Sbjct: 250 RDFYSATSASSKLIFSVWDGGGNDTLDFSGFTQN 283
>gi|150377401|ref|YP_001313996.1| serralysin [Sinorhizobium medicae WSM419]
gi|150031948|gb|ABR64063.1| Serralysin [Sinorhizobium medicae WSM419]
Length = 648
Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats.
Identities = 104/442 (23%), Positives = 154/442 (34%), Gaps = 86/442 (19%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF--------DITELNPNAQEVARWALG 60
T D LL D W+ + + S LN Q AR
Sbjct: 10 TGNAYIDGLLGDWKWAVKDFTFSFPTSASFYGSGYGNGEPQKGFAALNAAQQTTARAVFD 69
Query: 61 EWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG- 115
++S V ++F E + H+D++ SS+ P YF + D W
Sbjct: 70 QFSSVAKVSFTEIAESATKHADVRLASSDA-----PSTAWAYFPSTAAEGGDAWFNSSSG 124
Query: 116 ------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-- 167
KG LHEIGHALGL H N DS +VMSY
Sbjct: 125 YYSRPMKGNYAYLTFLHEIGHALGLEHAHEGNVMPAN--------RDSMEYTVMSYRSYV 176
Query: 168 ---PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQK--------- 214
++ ++GY + M+ DI A+Q IYGA + GN Y+
Sbjct: 177 GASTTTGYINETWGYAQSLMMYDIAALQHIYGADFTTQSGNTTYRWSPTSGEMFINGVGQ 236
Query: 215 ----DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------------- 257
+ + T++D GG D D + +DL W++ +
Sbjct: 237 NAPGGNKILLTVWDGGGTDTYDFSNYT-TALKVDLRPGEWTTTSAVQLAKLRYDDSKVAI 295
Query: 258 KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N+ A ++IE+ G +GNDV+ GN+A NV + + GND G++G D A
Sbjct: 296 GNIANALQYQSDARSLIENAKGGAGNDVITGNAAANVLWGNGGNDRLIGANGNDNLVGGA 355
Query: 312 PSY--------LYKIYRFENAIIVYDA-------NEHKQDFLSDVERLRFADQCIDSVNV 356
+ Y A +V D E D VERL +
Sbjct: 356 GADRLEGGNGNDLANYYNAAAGVVADIYSPGSNRGEAAGDTYVSVERLYGSAFGDTLAGD 415
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
+ ++L A + L G D
Sbjct: 416 RFANLLNGLAGNDVLHGRAGND 437
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 10/145 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-- 267
++ G D LD + NY + + + N A
Sbjct: 436 NDTLIGGDGNDSLVGGAGADRLDGGNGVDLANYYNAALGLVADLYSPVSNTGEAAGDTYL 495
Query: 268 -IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E + GS+ ND + G++ N+ +GNDV +G G DT + + +
Sbjct: 496 SVERLYGSAFNDSLRGDNIANLLNGLAGNDVLNGRGGNDTLIGGEGADRLIGGGGSDMFV 555
Query: 327 VYDANEHK-------QDFLSDVERL 344
A + + DF ++R+
Sbjct: 556 FQTATQSRPAAMDVIDDFARGIDRI 580
>gi|238623374|emb|CAS06681.1| alkaline metalloprotease [Pseudomonas sp. W12b]
Length = 277
Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 104/277 (37%), Gaps = 44/277 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H ++ ++ N
Sbjct: 2 VNGKPSFSVDQAADHLLRENAAYRDLDGNGKIDLTYTFLTSASSATMNKHGIT-GFSQFN 60
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 61 TQQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYHQ 120
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ + HEIGH LGL HPG YN G D D
Sbjct: 121 SGLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 180
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 181 YGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 240
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTL 235
+ +++D GG+D LD +
Sbjct: 241 GFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSG 277
>gi|238623398|emb|CAS06693.1| alkaline metalloprotease [Pseudomonas rhodesiae]
Length = 278
Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 103/273 (37%), Gaps = 37/273 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 6 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNA 65
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 66 QQKAQAVLAMQSWADVANVTFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 125
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 126 SWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDASYGQDTR 185
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 186 GYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 245
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 246 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 278
>gi|209967239|ref|YP_002300154.1| Alkaline protease, putative [Rhodospirillum centenum SW]
gi|209960705|gb|ACJ01342.1| Alkaline protease, putative [Rhodospirillum centenum SW]
Length = 1518
Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats.
Identities = 89/375 (23%), Positives = 134/375 (35%), Gaps = 59/375 (15%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDV---------LTTHRLSFDITELNPNAQEVARWAL 59
T + D LL + W + I Y T S + L Q R AL
Sbjct: 22 TGDGNVDTLLYGRKWGSNSITYSFPADASDLSDYPAGTAIDSSYFSALTAAQQTAVRAAL 81
Query: 60 GEWSKVVDLTFEETSI--HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK- 116
WS+V L+F + + DI+ + +P + ++ D+ + +G
Sbjct: 82 NAWSEVSGLSFTQAATPAQGDIRLY-----WYLSPDNLTARIVDYPSDQPEGGDLQLGSA 136
Query: 117 --------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM- 167
G+ LHE+GHALGL HP G+P D D SVMSY
Sbjct: 137 AGVASWDPGSYAYFLLLHELGHALGLKHPHDSVNGFPA----ADSSQDWVGLSVMSYRSQ 192
Query: 168 ---PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIY 223
P + A+ Y PM++DI A+Q +YG + G+ Y + T++
Sbjct: 193 AGGPVEGYSLAAGSYPFRPMLNDIAAIQALYGPNWSTNAGDTTYSFDPTAP--VIFMTLW 250
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------------KNMTIAQ------H 265
D GGDD + + L W S+GG + N+
Sbjct: 251 DGGGDDTYNFASYA-TDLTVSLLPGEWISLGGQQAILDTGSGVRAPGNIANPYLYQGDQR 309
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++IE+ +G SG+D + GN A+N GND G G DT +
Sbjct: 310 SLIENAIGGSGHDRITGNVADNRLEGRDGNDTLTGGDGNDTLIGGNGNDSL----LGGNG 365
Query: 326 IVYDANEHKQDFLSD 340
+ D L
Sbjct: 366 SDSLSGGADNDTLEG 380
Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 25/269 (9%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ YI L + ++ G + T+ + + G GND V G + +G+D
Sbjct: 1258 ARQYIRLGPDDD-TLRGGGGDDTVGSGEGRDLLYGDEGNDSVFGGEGYDRLSGGAGDDTI 1316
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---- 354
DG SG+D A + + D S VE +RF DQ +
Sbjct: 1317 DGGSGVDVVRIEAARSAVTLEATGPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVR 1376
Query: 355 -------NVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLY 404
Y A + D+ + F+ ++H+ FG +EGRD T FD Y
Sbjct: 1377 FEAVQPDGGGAFDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAY 1436
Query: 405 LGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDL 462
L + D+R + + + HY+ G +E R+P A F Y+ + D+ +A D
Sbjct: 1437 LARWADVRVAVEAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNSDVADAGIDP--- 1493
Query: 463 VQVGKDHFSNFGCEEGRFVT-FDSYLYLG 490
H+ +G E R T D+ L+L
Sbjct: 1494 ----LRHWLVWGIGEDRIATAADTGLWLA 1518
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 61/331 (18%), Positives = 101/331 (30%), Gaps = 54/331 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + T V+G + ++ G+D G D +
Sbjct: 1234 DYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSGEGRDLLYGDE 1293
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ F + D + S V+ +R +
Sbjct: 1294 GNDS----VFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEATGPWGVRLSG- 1348
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G DV ++ I FD + + D G
Sbjct: 1349 ----AATGTDVASGVEL-----------IRFDDQVVYVTLPVRFEAVQPDGG-------- 1385
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSY 486
AF Y+A D+ A AD Q G +H+ FG EGR T FD
Sbjct: 1386 ---------GAFDEAFYLAQWADVRAAVADG--RFQSGLEHYLAFGQAEGRDPTPLFDEE 1434
Query: 487 LYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 544
YL + D+R + + + HY+ G +E R+P A F Y+ + D+ +A D
Sbjct: 1435 AYLARWADVRVAVEAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNSDVADAGIDP- 1493
Query: 545 DLVQAGKDHFSNFGYEEGR-SITFNPDLYLT 574
H+ +G E R + + L+L
Sbjct: 1494 ------LRHWLVWGIGEDRIATAADTGLWLA 1518
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL + D+R R + HY+ G EGR+P F Y+A D+ A
Sbjct: 1388 FDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV 1447
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+G +H+ FG+ E R + F+ YL D+ + +H++ G
Sbjct: 1448 EAGQ--FHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNSDVADA----GIDPLRHWLVWG 1501
Query: 599 MKEGR 603
+ E R
Sbjct: 1502 IGEDR 1506
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF Y+A D+ A AD Q+G +H+ FG EGR T F+ + YL + D+
Sbjct: 1387 AFDEAFYLAQWADVRAAVADG--RFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVR 1444
Query: 581 NVFGSDR-SAAAQHYITHGMKEGRALG 606
+ + + +HY+ G +E R
Sbjct: 1445 VAVEAGQFHSGYEHYLAFGWREDRDPS 1471
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALGI 607
F+ YL + D+ R + +HY+ G EGR
Sbjct: 1387 AFDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTP 1429
>gi|238623394|emb|CAS06691.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 287
Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 106/276 (38%), Gaps = 37/276 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP Y+ ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 12 VNGKPSYSVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSATMNKHGISGFSQFNT 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ WS V ++TF E + D N + P + Y
Sbjct: 72 QQKAQAALAMQSWSDVANVTFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 131
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 191
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQ- 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+ Y
Sbjct: 192 GYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDTTYGFNSNT 251
Query: 213 --------QKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 252 GRDFYSAKSNADKLVFSVWDGGGNDTLDFSGFTQNQ 287
>gi|330969859|gb|EGH69925.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 535
Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats.
Identities = 102/432 (23%), Positives = 155/432 (35%), Gaps = 82/432 (18%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS-----FDITELNPNAQEVARWALG 60
P + + HL + +K D + S D L A+ AL
Sbjct: 29 PFWLGDSSGTHLT--------YSFHKADSVYATDYSRSQEPGDAYSLTDAQAVAAKSALD 80
Query: 61 EWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRYDSRY---FMEINFDKA 107
WS V D+ F E DI+F + G P R ++ N + A
Sbjct: 81 AWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAA 140
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
D KGT +HE GHALGL H Y +D +E+ ++MSY
Sbjct: 141 D-----PAKGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN 192
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+ SF TPM+ D+ A+Q IYGA G+++YK Q +TI+D+G
Sbjct: 193 ------NYSF-KPTTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFETIWDAG 242
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVV 272
G D +D + I+LN +S+IG + IA IE+ +
Sbjct: 243 GKDTIDASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAI 301
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YR 320
GS+ ND +IGN +NV G D G G DT+ L +
Sbjct: 302 GSAFNDTLIGNDLDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTLKIT 361
Query: 321 FENAIIVYDANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYED 370
++N + L++ E + D+ ++L A +
Sbjct: 362 YDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDK 421
Query: 371 LIQVIGQDVFES 382
L+ G D+
Sbjct: 422 LVGGQGADIMTG 433
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 65/194 (33%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + G D L +T I+LN + ++
Sbjct: 329 GGLGNDTYVIDQAGELDLVQEK--ADQGVDTLKITYDNTSPIAQVINLNAGTLANFENVH 386
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +V+G+ N+ + GN A+NV F +GND G G D + + +
Sbjct: 387 -----LKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFV 441
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N+ ++ D N + D LS ++ D S A
Sbjct: 442 FNDLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|238623382|emb|CAS06685.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 285
Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats.
Identities = 65/282 (23%), Positives = 106/282 (37%), Gaps = 44/282 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 5 VNGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFS 63
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 64 NLQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHT 123
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ + G HEIGH LGL HPG YN G D D
Sbjct: 124 SGTDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 183
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 184 YGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 243
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 244 GFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 285
>gi|317447665|emb|CBJ55064.1| alkaline metalloprotease [Pseudomonas sp. R-38748]
Length = 292
Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats.
Identities = 65/282 (23%), Positives = 106/282 (37%), Gaps = 44/282 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 12 VNGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFS 70
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 71 NLQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHT 130
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ + G HEIGH LGL HPG YN G D D
Sbjct: 131 SGTDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 190
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 191 YGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 250
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 251 GFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 292
>gi|197284192|ref|YP_002150064.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681679|emb|CAR40769.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 649
Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats.
Identities = 85/383 (22%), Positives = 136/383 (35%), Gaps = 91/383 (23%)
Query: 39 RLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN---------- 86
L F +T + P+ QEV L S DLTF I +
Sbjct: 123 PLYFSVTTMTIFPHQQEVVTEILQLASDFADLTFTRVPIQKNANLKFGYYKQFATGYYMT 182
Query: 87 ----GYVCTPRYDSR------------------------------------YFMEINFDK 106
G+ P Y+ ++E +
Sbjct: 183 RETVGFASKPNYNGTPIKEIGQNESYDFSGSIFINLASHDFYQWVKRDNLDKYIENEANI 242
Query: 107 ADVWRYGIGK----------------------GTILSHNALHEIGHALGLMHPGSYNGGY 144
D++ Y G+ + + LHE+GHALGL H +Y
Sbjct: 243 GDLYNYHDNNQVAIIKSTDVLLNETMKSKHKLGSQIYYVFLHELGHALGLEHIDAYLKNI 302
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-G 203
++ ++ +VM D Y T M+ DI+ +Q +YG +
Sbjct: 303 KNSAIE------TYKYTVMGMGFADIKDADFGGLYPMTFMLVDILLLQYLYGPNMTTRLE 356
Query: 204 NNIYKIEVQQK---------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
NN Y + + I+D+GG D LD +L V I+LN +S IG
Sbjct: 357 NNTYGFNSNTGRAAYSLKSIEDKLVSCIWDAGGIDTLDFSLYT-VNQVINLNEGCFSDIG 415
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N++IA T+IE+ +G G+D +IGN +N GND+F G G D F+ + +
Sbjct: 416 GLRSNISIAYKTIIENAIGGKGDDTLIGNPFDNNLIGGDGNDLFYGGDGNDLFYGGSGND 475
Query: 315 LYKIYRFENAIIVYDANEHKQDF 337
+ + + D ++ D+
Sbjct: 476 VIYGEMGNDVLYGDDGDDMLIDY 498
>gi|288963038|ref|YP_003453317.1| hypothetical protein AZL_f00130 [Azospirillum sp. B510]
gi|288915290|dbj|BAI76773.1| hypothetical protein AZL_f00130 [Azospirillum sp. B510]
Length = 905
Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats.
Identities = 102/260 (39%), Positives = 130/260 (50%), Gaps = 8/260 (3%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
S L Y ASY DL V G D H+ G +EGR ++FD Y+ SY DL N FG
Sbjct: 638 PVFSPLAYIASYADLSAVFGTDAAAGAAHYIANGRAEGRTVSFDPLAYIASYGDLANAFG 697
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
++ A A HYI +G +EGR F L YIAS+ DL N F H+ G
Sbjct: 698 ANGDAGAAHYIANGRREGRTVS-FDPLAYIASYGDLANVFGANGGAGAA---HYIANGRA 753
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
EGR V+FD YL SY DL FG+DR +A HYIT+G EGR F L Y+A++ DL
Sbjct: 754 EGRTVSFDPLAYLASYGDLAAAFGADRRSAEIHYITNGRVEGRTV-TFNPLAYLAANADL 812
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
AF + H+ G EGR TF+ YL + D+ G D +AA +HYI
Sbjct: 813 AAAFGADSGRAEL---HYLGTGRTEGRRTTFDAGAYLAANGDVAAATGGDLNAAMRHYIL 869
Query: 597 HGMKEGRALGISGMQFKSVM 616
+G EGR L + +
Sbjct: 870 YGRLEGRMLSPTASSVHAAG 889
Score = 156 bits (393), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/222 (35%), Positives = 105/222 (47%), Gaps = 8/222 (3%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ L Y ASY DL G + H+ G EGR ++FD Y
Sbjct: 666 HYIANGRAEGRTVSFDPLAYIASYGDLANAFGANGDAGAAHYIANGRREGRTVSFDPLAY 725
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ SY DL NVFG++ GA A HYI +G EGR F L Y+AS+ DL AF +
Sbjct: 726 IASYGDLANVFGANGGAGAAHYIANGRAEGRTVS-FDPLAYLASYGDLAAAFGAD---RR 781
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
+ H+ G EGR VTF+ YL + DL FG+D G A HY+ G EGR F
Sbjct: 782 SAEIHYITNGRVEGRTVTFNPLAYLAANADLAAAFGADSGRAELHYLGTGRTEGRRT-TF 840
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
A Y+A++ D+ A + A H+ +G EGR ++
Sbjct: 841 DAGAYLAANGDVAAATGGD---LNAAMRHYILYGRLEGRMLS 879
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 41/96 (42%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + L Y A+ DL G D + H+ G +EGR TFD+
Sbjct: 785 IHYITNGRVEGRTVTFNPLAYLAANADLAAAFGADSGRAELHYLGTGRTEGRRTTFDAGA 844
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
YL + D+ G D AA RHYI +G EGR
Sbjct: 845 YLAANGDVAAATGGDLNAAMRHYILYGRLEGRMLSP 880
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
L AP G G F+P Y+ SY DL VFG+D +A A
Sbjct: 606 SAALTVPGIPAPVTETGGASSSPAAGPGPMPEPVFSPLAYIASYADLSAVFGTDAAAGAA 665
Query: 593 HYITHGMKEGRALGISGMQF-KSVMNLSEKSRDKAD 627
HYI +G EGR + + + S +L+ D
Sbjct: 666 HYIANGRAEGRTVSFDPLAYIASYGDLANAFGANGD 701
>gi|317447652|emb|CBJ55057.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 289
Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 104/276 (37%), Gaps = 37/276 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 13 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 72
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 73 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 132
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 192
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 193 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNT 252
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 253 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 288
>gi|197284190|ref|YP_002150062.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681677|emb|CAR40763.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 654
Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats.
Identities = 86/374 (22%), Positives = 137/374 (36%), Gaps = 92/374 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETS--IHSDIKFIS---------------SNNGYVCT 91
P+ QEV L S DLTF ++++KF N G+
Sbjct: 137 PHQQEVITEILQLASDFADLTFTRVPIQKNANLKFGYFNHFYKDSTTFFMTRGNGGFAQY 196
Query: 92 PRYDSR------------------------------------YFMEINFDKADVWRYGIG 115
P Y+ ++E + D++ Y
Sbjct: 197 PNYNGTPIKEIGPNEDYDIPGTIFINLATHEFYKWENGDNIDKYIENEANPGDLYNYHDN 256
Query: 116 K----------------------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
G+ +HE+GHALGLMH Y +
Sbjct: 257 NQVAIIKSTDVLLNETMKSKHKLGSYEYLCFIHELGHALGLMHINVY------LKNIKND 310
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKI--- 209
++ SVM+Y D + Y T M+ DI+ +Q +YG + NN Y
Sbjct: 311 VILTYKYSVMAYQFADIKDADFAGLYPMTFMLVDILLLQYLYGPNMTTRLENNTYGFHSN 370
Query: 210 ------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + I+D+GG D LD +L V I+LN +S IGG N++IA
Sbjct: 371 TGRAAYSLNSIEDKLVSCIWDAGGIDTLDFSLYT-VNQVINLNEGCFSDIGGLRSNISIA 429
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T+IE+ +G G+D +IGN +N GND+F G G D F+ + + + +
Sbjct: 430 YKTIIENAIGGKGDDTLIGNPFDNNLIGGDGNDLFYGGDGNDLFYGGSGNDVIYGELGND 489
Query: 324 AIIVYDANEHKQDF 337
+ D ++ D+
Sbjct: 490 VLYGDDGDDMLIDY 503
>gi|238623396|emb|CAS06692.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 284
Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 104/273 (38%), Gaps = 37/273 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFD-----------ITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 12 INGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGIAGFSQFNA 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 72 QQKAQAVLAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 131
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 191
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 192 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 251
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 252 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 284
>gi|88809389|ref|ZP_01124897.1| hypothetical protein WH7805_09564 [Synechococcus sp. WH 7805]
gi|88786608|gb|EAR17767.1| hypothetical protein WH7805_09564 [Synechococcus sp. WH 7805]
Length = 1961
Score = 210 bits (535), Expect = 5e-52, Method: Composition-based stats.
Identities = 105/411 (25%), Positives = 165/411 (40%), Gaps = 60/411 (14%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF--DITELNPNAQEVARWALGEWSKVVDL 68
E + R + K LT + + D L+ Q + R + + +
Sbjct: 160 EEAGTY-TRRFNLGGSGLGAKNGQLTYNITGWADDSNGLSAERQNLTREVFNVYEAITGI 218
Query: 69 TFEETSIHSDIKFISSNNG---YVCTPRYD---SRYFMEIN--------FDKADVWRYGI 114
F E + D +F +++G Y+ YD + ++ N + A W YG
Sbjct: 219 EFVEVATEGDFRFTDNDSGAYAYLGGGWYDQDPNTGTIDYNAAIIDYSVINVASSWFYGD 278
Query: 115 GK-GTILSHNALHEIGHALGLMHPGSYNGGY--PVYGVDNDYENDSFLTSVMSYFMPQ-D 170
+ HEIGHALGL H G YN G P Y Y ND++LT++MSY+ +
Sbjct: 279 SSYNSYTPQTIFHEIGHALGLGHQGQYNAGNGNPTYENSAQYGNDTWLTTMMSYWSQTTN 338
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-----GNNIYKIEVQQKD---------- 215
+ ++AS Y TPM D +A+ K+YG+ GN +Y +
Sbjct: 339 TNVNASRAYLQTPMTVDWIALDKLYGSQGYGSFKAFNGNTVYGVGTNISSGTSEIMNNFA 398
Query: 216 ---SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-------SSIGGYEKNMTIAQH 265
S T+ D G D+L+++ +I+L SSIGG N+TI
Sbjct: 399 TMISDTAYTLVDGSGYDILNVSNYS-DDQFINLAPSELNGTLPSSSSIGGLVNNLTIGVG 457
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS----------YL 315
T++E +G SGND +GN A+NVF +G D F S G DT++ + +
Sbjct: 458 TILEEAIGGSGNDTFLGNIADNVFRGGNGGDRFYDSFGSDTYYGGSGTFDTLYFSENYSD 517
Query: 316 YKIYRFENAIIVYDANEHKQDF---LSDVERLRFADQCIDSVNVKQRSILE 363
+ I ++ N D +D+E + F D I + I
Sbjct: 518 FSIENLGTSLAFSRNNSGLADTDLIWNDIELVYFNDDVIKTYQELLADITP 568
>gi|317447667|emb|CBJ55065.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 287
Score = 210 bits (535), Expect = 6e-52, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 105/276 (38%), Gaps = 37/276 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 12 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 72 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 131
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 191
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIEVQ- 212
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 192 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNT 251
Query: 213 --------QKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 252 GRDFLSASSNADKLVFSVWDGGGNDTLDFSGFTQNQ 287
>gi|238623408|emb|CAS06698.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 289
Score = 210 bits (534), Expect = 6e-52, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 102/279 (36%), Gaps = 44/279 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 12 VNGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFS 70
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN----- 103
+ A A+ W+ V ++TF E + D N Y N
Sbjct: 71 NLQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYNT 130
Query: 104 ----------FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
++ G HEIGH LGL HPG YN G D D
Sbjct: 131 SGTDGTSWYLINRGYTDNINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 190
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 191 YGQDTRGYSVMSYWSEFNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 250
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 251 GFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFT 289
>gi|238623384|emb|CAS06686.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 291
Score = 210 bits (534), Expect = 7e-52, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 105/281 (37%), Gaps = 44/281 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 12 VNGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFS 70
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 71 NLQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHT 130
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ + G HEIGH LGL HPG YN G D D
Sbjct: 131 SGTDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 190
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 191 YGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 250
Query: 208 KIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D GG+D LD +
Sbjct: 251 GFNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQN 291
>gi|238623400|emb|CAS06694.1| alkaline metalloprotease [Pseudomonas tolaasii]
Length = 286
Score = 210 bits (534), Expect = 8e-52, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 106/275 (38%), Gaps = 37/275 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP +T ++ ADHLLRD + + K D+ T S ++ N
Sbjct: 12 VNGKPSWTVDQAADHLLRDGASYKDVNHNGKIDLTYTFLTSATTATMNKHGISGFSQFNA 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG----------YVCTPRYDSRYF 99
+ A A+ W+ V +++F E++ D +N Y+
Sbjct: 72 QQKAQAVLAMQSWADVANVSFTESASGGDTHMTFANYSGGQAGAAAFAYLPGTGAGYDGT 131
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + HEIGH LGL HPG YN G D DY D+
Sbjct: 132 SWYLTNSSYTVNKTPDVNNYGRQTLTHEIGHTLGLAHPGDYNAGTGNPTYKDADYGQDTR 191
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIE--- 210
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+ Y
Sbjct: 192 GYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDTTYGFNSNT 251
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D GG+D LD +
Sbjct: 252 GRDFYSATSNADKLVFSVWDGGGNDTLDFSGFTQN 286
>gi|238623390|emb|CAS06689.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 283
Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats.
Identities = 66/273 (24%), Positives = 104/273 (38%), Gaps = 37/273 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 11 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 70
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 71 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 130
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 131 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 190
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIEVQ- 212
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 191 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNT 250
Query: 213 --------QKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 251 GRDFLSASSNADKLVFSVWDGGGNDTLDFSGFT 283
>gi|237801271|ref|ZP_04589732.1| metalloprotease [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024130|gb|EGI04187.1| metalloprotease [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 535
Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats.
Identities = 109/455 (23%), Positives = 159/455 (34%), Gaps = 79/455 (17%)
Query: 9 TTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQEVAR 56
+ + LL YW + + Y + + D L + AR
Sbjct: 17 SDDDRITSLLWGPYWLKGPNGNNLTYSFHTADSVYSTDYSRSQEPSDAYSLTTAQMDAAR 76
Query: 57 WALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRYDSRYFMEINFDK 106
ALG WS V D+ F E DI+F + G P R +
Sbjct: 77 SALGAWSAVADIKFTEVQDTPDNVGDIRFGGFKGLKGTELGQAYAPGTLGRS--GDVWIG 134
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
DV GKGT +HE GHALGL H Y +D +E+ ++MSY
Sbjct: 135 PDVDAAVPGKGTPDYLTFMHETGHALGLKHSFE-ETQYNDVLLDAKFEDAR--YTIMSY- 190
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ TPM+ D+ A+Q IYGA N++YK D +TI+D+
Sbjct: 191 ------TNKYSFKPTTPMLLDVAAMQFIYGANTHYHTENDVYKWA---PDQSVFETIWDA 241
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESV 271
GG D +D + I+LN +S+IG + IA T IE+
Sbjct: 242 GGKDTIDASNQAAF-VKINLNEGEFSTIGKAFLDYNHTPDNPTQMNSGLAIAYGTHIENA 300
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------Y 319
+GS+ +D +IGN NV G D G G DT+ L +
Sbjct: 301 IGSAFDDTLIGNELANVLDGRGGLDTMIGGLGNDTYVVDQVGELALVQEKANEGIDTLKI 360
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYE 369
+ N + L++ E + D+ +IL +
Sbjct: 361 TYNNTSDKAAVIDLNTGTLANFENVHLKGEGDFTVLGNDRNNTLTGNDANNILVGGGGND 420
Query: 370 DLIQVIGQDV---FESMKHFYEFGLSE-GRDITFD 400
LI G D+ HF LSE G+ + D
Sbjct: 421 KLIGGQGADILTGGSGADHFVFNDLSETGKGLNSD 455
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 20/145 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y ++ + + + + G D L +T IDLNT + ++
Sbjct: 329 GGLGNDTYVVDQVGELALVQEK--ANEGIDTLKITYNNTSDKAAVIDLNTGTLANF---- 382
Query: 258 KNMTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E+V G+ V+GN NN + N++ G G D + +
Sbjct: 383 -----------ENVHLKGEGDFTVLGNDRNNTLTGNDANNILVGGGGNDKLIGGQGADIL 431
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV 341
+ + D +E + SDV
Sbjct: 432 TGGSGADHFVFNDLSETGKGLNSDV 456
>gi|317447671|emb|CBJ55067.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 283
Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats.
Identities = 66/273 (24%), Positives = 103/273 (37%), Gaps = 37/273 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 11 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNA 70
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V +TF E + D N + P + Y
Sbjct: 71 QQKAQAVLAMQSWADVAKVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 130
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 131 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 190
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 191 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRASDTTYGFNSNT 250
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 251 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 283
>gi|238623362|emb|CAS06675.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 286
Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats.
Identities = 66/275 (24%), Positives = 103/275 (37%), Gaps = 37/275 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 12 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 72 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 131
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 191
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 192 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNT 251
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D GG+D LD +
Sbjct: 252 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQN 286
>gi|238623388|emb|CAS06688.1| alkaline metalloprotease [Pseudomonas sp. W17c]
Length = 285
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 63/276 (22%), Positives = 107/276 (38%), Gaps = 40/276 (14%)
Query: 2 HNIKPVYTTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLS----------FDITELNPN 50
N KP ++ ++ A LLRD +W++ K ++ T + ++ +
Sbjct: 12 VNGKPSFSVDQAATQLLRDGAHWNDLDHSGKIELTYTFLTAKTANFSGLGVTGFSQFSAL 71
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y +
Sbjct: 72 QKAQAVLAMQSWADVANVTFTEAARGGDGHMTFGNYSGGQEGAAAFAFLPGTEPGYDGQS 131
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFL 159
+ + G HEIGH LGL HPG YN G D Y D+
Sbjct: 132 WYLTGSGYDVNKTPGLSNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTYKDASYGQDTRG 191
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP------------KGSLG 203
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + G
Sbjct: 192 YSLMSYWSESNTNQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNTG 251
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ + + +++D+GG D LD +
Sbjct: 252 RDF--LSASSSSDKVVFSVWDAGGKDTLDFSGFTQN 285
>gi|238623380|emb|CAS06684.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 290
Score = 208 bits (530), Expect = 2e-51, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 105/278 (37%), Gaps = 44/278 (15%)
Query: 3 NIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELNP 49
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSN 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF-- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 72 LQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTS 131
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDY 153
+ + G HEIGH LGL HPG YN G D DY
Sbjct: 132 GTDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYRDADY 191
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 192 GQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYG 251
Query: 209 IE---------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 252 FNSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFT 289
>gi|325981485|ref|YP_004293887.1| peptidase M10A and M12B matrixin and adamalysin [Nitrosomonas sp.
AL212]
gi|325531004|gb|ADZ25725.1| peptidase M10A and M12B matrixin and adamalysin [Nitrosomonas sp.
AL212]
Length = 511
Score = 208 bits (530), Expect = 2e-51, Method: Composition-based stats.
Identities = 98/396 (24%), Positives = 151/396 (38%), Gaps = 50/396 (12%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH----S 77
+WS+ Y + L Q AL +W+ V +L F + +
Sbjct: 46 FWSSLSGGYGFQFGDGEPWNSAFVPLTTADQINFVRALQQWANVANLNFVQVAETASEVG 105
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG--------KGTILSHNALHEIG 129
DI+ + + T Y + D+W G G+I LHE+G
Sbjct: 106 DIRAAYTEDPDEST--LAWTYLPSPSTLAGDIWINTKGLLRFQDWNPGSISFETILHELG 163
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY---FMPQDSMMDASFGYCATPMVS 186
HALGL HP + G+ D D+ ++MSY + D + SF + TPMV
Sbjct: 164 HALGLEHPFADPNDPSKVGLPRDL--DNTRYTIMSYTYSNLEGDEGTEFSF-HPTTPMVL 220
Query: 187 DIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYID 244
DI A+Q +YG+ N+ Y + + +TI+D+GG D L G + + ID
Sbjct: 221 DISAIQFLYGSNNFYHAVNDTYTFDDAN---TYHETIWDAGGSSDTL--WYAGAIPSLID 275
Query: 245 LNTESWS-------------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
LN S S +IG N+ IA + IE+ +G GND IGN+A+N
Sbjct: 276 LNPASASQIGKPVYVQSNGVNIGSPIHNIWIADNVTIENAIGGQGNDTFIGNNASNSL-- 333
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVYDANEHKQDFLSDVERLRFADQC 350
DG G DT P + + + + I D N QD L ++ER+ F D
Sbjct: 334 -------DGGGGTDTVVIGFPRHQFTLGKSSGHYFIAADTNPANQDILLNIERVEFDDTG 386
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + + + +
Sbjct: 387 LALDLDGHAGEVAKLLGAVFGASSLANQEYAGIGLI 422
>gi|307300794|ref|ZP_07580569.1| Serralysin [Sinorhizobium meliloti BL225C]
gi|306904328|gb|EFN34913.1| Serralysin [Sinorhizobium meliloti BL225C]
Length = 551
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 98/442 (22%), Positives = 147/442 (33%), Gaps = 86/442 (19%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF--------DITELNPNAQEVARWALG 60
T D LL D W + + + LN Q R +L
Sbjct: 10 TGNAYIDGLLGDWKWGIKDFTFSFPTSASFYGAGYGNGEPLKGFAVLNAAQQAATRASLD 69
Query: 61 EWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG- 115
++S V ++TF E + H+D++ SS+ P YF + D W
Sbjct: 70 QFSSVANVTFTEITESVTKHADLRLASSDA-----PSTAWAYFPSTAAEGGDAWFNKSSG 124
Query: 116 ------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-- 167
KG LHE GHALGL H N DS +VMSY
Sbjct: 125 HYSRPVKGNYAYVTFLHETGHALGLEHAHEGNVMPVN--------RDSMEYTVMSYRSYV 176
Query: 168 ---PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK--------- 214
+ ++GY + M+ DI A+Q +YGA N Y+
Sbjct: 177 GASTTTGYTNETWGYAQSLMMYDIAALQHMYGADFTTHSENTTYRWSPTSGEMFVNGMGQ 236
Query: 215 ----DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------------- 257
+ + T++D GG D D + +DL W++ +
Sbjct: 237 GAPGGNKILLTVWDGGGTDTYDFSNYT-TALKVDLRPGEWTTTSAAQLAKLHYDGSKVAI 295
Query: 258 KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N+ A ++IE+ G +GND + GN+A N + + GND G G D A
Sbjct: 296 GNIANALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGNGGNDRLIGGDGNDNLAGGA 355
Query: 312 PSY--------LYKIYRFENAIIVYD-------ANEHKQDFLSDVERLRFADQCIDSVNV 356
+ Y A +V D E D +ERL +
Sbjct: 356 GADRLDGGNGTDLANYSNATAGMVADLYSPGSNTGEAAGDTYVSIERLYGSAFNDTLRGD 415
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
+ ++L A + L G D
Sbjct: 416 NRANLLNGLAGNDMLNGRDGND 437
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 3/156 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + G D LD + NY + + + N A
Sbjct: 337 GGNDRLIGGDGNDNLAGGAGADRLDGGNGTDLANYSNATAGMVADLYSPGSNTGEAAGDT 396
Query: 268 ---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE + GS+ ND + G++ N+ +GND+ +G G DT + +
Sbjct: 397 YVSIERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGNGADRLIGGGGADT 456
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + F ++ +D ++ S
Sbjct: 457 FVFQTTAQSAPAFRDVIDDFASGVDRMDLRSIDASS 492
>gi|238623423|emb|CAS06706.1| alkaline metalloprotease [Pseudomonas azotoformans]
gi|317447669|emb|CBJ55066.1| alkaline metalloprotease [Pseudomonas azotoformans]
Length = 282
Score = 208 bits (529), Expect = 3e-51, Method: Composition-based stats.
Identities = 66/271 (24%), Positives = 104/271 (38%), Gaps = 37/271 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFD-----------ITELNP 49
N KP Y+ ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 12 INGKPSYSVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGIAGFSQFNA 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 72 QQKAQAVLAMQSWADVANVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 131
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 191
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 192 GYSLMSYWSESNTNQNFSKGGVEAYASAPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 251
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTL 235
+ +++D GG+D LD +
Sbjct: 252 GRDFYSATSNADKLVFSVWDGGGNDTLDFSG 282
>gi|332706690|ref|ZP_08426751.1| matrixin family protein [Lyngbya majuscula 3L]
gi|332354574|gb|EGJ34053.1| matrixin family protein [Lyngbya majuscula 3L]
Length = 1099
Score = 208 bits (528), Expect = 4e-51, Method: Composition-based stats.
Identities = 111/443 (25%), Positives = 163/443 (36%), Gaps = 69/443 (15%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTH-RLSFDITELNPNAQEVARWALGEWSKVVD 67
+ D LL D YW + KP LT S L+ + + + R AL WS+V +
Sbjct: 6 SGNNDIDALLDDDYWVD---TGKPVSLTYSINYSTGSDGLDLSERSMVREALTRWSEVAN 62
Query: 68 LTFEETSIHSDIKFISSNN-GYVCTPRYDSRYFMEINFDKADVW--------RYGIGKGT 118
+TF E S +++F + V + + +++ ++ + G+G
Sbjct: 63 ITFREVSNKGNLRFSGQSGISGVASQKNARKWWKPRSWRSDKLDHVNIKLGKDSATGRGH 122
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVD-NDYENDSFLTSVMSYFMPQDSMMDASF 177
ALHEIGHALGL HPG YNG Y D+ +VMSY D
Sbjct: 123 RFLDVALHEIGHALGLKHPGDYNGDTGKGSSPFLPYYKDNNTNTVMSYNDVGD------- 175
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS-------------PFIQTIYD 224
Y ATPM DI AVQ IYG+ + GN Y+ + S P +I+D
Sbjct: 176 -YAATPMPYDIRAVQYIYGSNNFNSGNTYYRFDSVNGYSYDNGLARRGSEKLPMKLSIWD 234
Query: 225 SGGDDLLDLTLIG--------GVKNYIDLNTESW---------------------SSI-- 253
SGG D LD + +G Y D+ SS+
Sbjct: 235 SGGVDTLDFSKLGPVIFNISRSSGYYFDIRGGGILTSQHAYKSITYQPIDNTNNTSSLRY 294
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+IA VIE+V+GS +D +IGN + N +GND G+ G D+ F A +
Sbjct: 295 KTTRYGTSIAYGVVIENVIGSLTSDTIIGNFSANHLKGGNGNDSLYGNGGSDSLFGEAGN 354
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I + D + + L + R L + L
Sbjct: 355 DSL-IGGTGRDELYGGTGNDSLDGNTGNDYLSGSSGNDFLRGGTGRDQLHGGTGNDTLSG 413
Query: 374 VIGQDVFESM--KHFYEFGLSEG 394
G D+ + G+
Sbjct: 414 DSGSDILSGSSGHDYLYGGIGND 436
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 35/110 (31%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G+D + G+ N+ + GND+ G SG D Y +
Sbjct: 671 GGAGNDRIYGGGGDDQLYGSYGNDNLYGGFGNDLLKGESGRDRMKGGFGDDQYVLDVDSM 730
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + D + D + I Y + ++IQ
Sbjct: 731 GDTIVEYAGQGIDKVYTSITYHLGDNLENLELDGTNPINGYGNNLNNVIQ 780
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 10/109 (9%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND + G + N+ + +G+D+ +G +G D A + + V +
Sbjct: 960 AGNDSLYGGAGNDRIYGGAGDDLLNGGTGNDVLSGGAGADKF----------VLNIPTEG 1009
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D++SD + I + + + ++ D +
Sbjct: 1010 IDYISDFVSQQGDKLQISASGFGSGLVQGILDVGQFVLGAAALDTNDRF 1058
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF----YYAPSYLYKIYRFENA 324
+S+ G +GND + G + +++ +GNDV G +G D F Y+ +
Sbjct: 963 DSLYGGAGNDRIYGGAGDDLLNGGTGNDVLSGGAGADKFVLNIPTEGIDYISDFVSQQGD 1022
Query: 325 IIVYDANEHKQDFLSDV 341
+ A+ + +
Sbjct: 1023 KLQISASGFGSGLVQGI 1039
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 1/131 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + GS GND + G N++ SG D G G D +
Sbjct: 669 LNGGAGNDRIYGGGGDDQLYGSYGNDNLYGGFGNDLLKGESGRDRMKGGFGDDQYVLDVD 728
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDL 371
S I + I ++E L I+ ++++ ++ ++
Sbjct: 729 SMGDTIVEYAGQGIDKVYTSITYHLGDNLENLELDGTNPINGYGNNLNNVIQGNSASNNI 788
Query: 372 IQVIGQDVFES 382
G D
Sbjct: 789 WGGRGHDTVNG 799
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
S I N ++ + + G +G+D++ G + N+V +G D F
Sbjct: 954 SVIQEIAGNDSLYGGAGNDRIYGGAGDDLLNGGTGNDVLSGGAGADKF 1001
>gi|317447659|emb|CBJ55061.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 276
Score = 207 bits (526), Expect = 6e-51, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 103/274 (37%), Gaps = 37/274 (13%)
Query: 4 IKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNPNA 51
KP YT ++ A LLR+ + ++ K D+ T S ++ N
Sbjct: 3 GKPSYTVDQAATQLLREGAAYRDFBGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQ 62
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEIN 103
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 63 KAQAALAMQSWADVANVTFTEKTSGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSW 122
Query: 104 FDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 123 YLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGY 182
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE----- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 183 SLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNTGR 242
Query: 211 ----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 243 DFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 276
>gi|317447657|emb|CBJ55060.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 289
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 43/279 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ A LLRD + + H +S ++ +
Sbjct: 13 VNGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGIS-GFSQFS 71
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY-- 98
Q A+ A+ W+ V ++TF E + D N + P + Y
Sbjct: 72 AQQQNQAKLAMQSWADVANVTFTEKATGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDG 131
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
+ HEIGH+LGL HPG YN G D Y D+
Sbjct: 132 TSWYLINSGYTANKNPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGNGNPTYNDASYGQDT 191
Query: 158 FLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP------------KGS 201
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA +
Sbjct: 192 RGYSIMSYWSENNTSQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSN 251
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
G + + + +++D+GG D LD + +
Sbjct: 252 TGRDF--LSASSSSDKVVFSVWDAGGKDTLDFSGFTQNQ 288
>gi|16262469|ref|NP_435262.1| protease [Sinorhizobium meliloti 1021]
gi|14523072|gb|AAK64674.1| Serralysin-like metalloprotease [Sinorhizobium meliloti 1021]
Length = 551
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 98/442 (22%), Positives = 147/442 (33%), Gaps = 86/442 (19%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF--------DITELNPNAQEVARWALG 60
T D LL D W + + + L+ Q R AL
Sbjct: 10 TGNAYIDGLLGDWKWGIKDFTFSFPTSASFYSAGYGNGEPLKGFAALSGAQQAATRAALD 69
Query: 61 EWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG- 115
++S V ++TF E + H+D++ SS+ P YF + D W
Sbjct: 70 QFSSVANVTFTEITESATKHADLRLASSDA-----PSTAWAYFPSTAAEGGDAWFNKSSG 124
Query: 116 ------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-- 167
KG LHE GHALGL H N DS +VMSY
Sbjct: 125 HYSRPVKGNYAYVTFLHETGHALGLEHAHEGNVMPVN--------RDSMEYTVMSYRSYV 176
Query: 168 ---PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK--------- 214
+ ++GY + M+ DI A+Q +YGA N Y+
Sbjct: 177 GASTTTGYTNETWGYAQSLMMYDIAALQHMYGADFTTHSENTTYRWSPTSGEMFVNGMGQ 236
Query: 215 ----DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------------- 257
+ + T++D GG D D + +DL W++ +
Sbjct: 237 GAPGGNKILLTVWDGGGTDTYDFSNYT-TALKVDLRPGEWTTTSAAQLAKLHYDGSKVAI 295
Query: 258 KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N+ A ++IE+ G +GND + GN+A N + + GND G G D A
Sbjct: 296 GNIANALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGNGGNDRLIGGDGNDNLAGGA 355
Query: 312 PSY--------LYKIYRFENAIIVYD-------ANEHKQDFLSDVERLRFADQCIDSVNV 356
+ Y A +V D E D +ERL +
Sbjct: 356 GADRLDGGNGTDLANYSNATAGMVADLYSPGSNTGEAAGDTYVSIERLYGSAFNDTLRGD 415
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
+ ++L A + L G D
Sbjct: 416 NRANLLNGLAGNDMLNGRDGND 437
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 3/156 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + G D LD + NY + + + N A
Sbjct: 337 GGNDRLIGGDGNDNLAGGAGADRLDGGNGTDLANYSNATAGMVADLYSPGSNTGEAAGDT 396
Query: 268 ---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE + GS+ ND + G++ N+ +GND+ +G G DT + +
Sbjct: 397 YVSIERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGNGADRLIGGGGADT 456
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + F ++ +D ++ S
Sbjct: 457 FVFQTTAQSAPAFRDVIDDFASGVDRMDLRSIDASS 492
>gi|238623386|emb|CAS06687.1| alkaline metalloprotease [Pseudomonas sp. W17a]
Length = 277
Score = 205 bits (522), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 103/273 (37%), Gaps = 37/273 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQE------- 53
N KP ++ ++ A LLRD + + K ++ T S + +N +
Sbjct: 5 VNGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGISGFSQFST 64
Query: 54 ----VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY--F 99
A+ A+ W+ V ++TF E + D N + P + Y
Sbjct: 65 QQQTQAKLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGNGYDGT 124
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ HEIGH+LGL HPG YN G D Y D+
Sbjct: 125 SWYLINSGYTQNKNPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGNGNPTYNDASYGQDTR 184
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ- 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + G+ Y
Sbjct: 185 GYSVMSYWSESNTNQNFSKGGVEAYSSGPLMDDIAAIQKLYGANMNTRTGDTTYGFNSNA 244
Query: 213 --------QKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D+GG D D +
Sbjct: 245 GRDFLSASSSSDKLVFSVWDAGGKDTFDFSGFT 277
>gi|218529968|ref|YP_002420784.1| autotransporter-associated beta strand repeat protein
[Methylobacterium chloromethanicum CM4]
gi|218522271|gb|ACK82856.1| autotransporter-associated beta strand repeat protein
[Methylobacterium chloromethanicum CM4]
Length = 1806
Score = 205 bits (522), Expect = 2e-50, Method: Composition-based stats.
Identities = 80/329 (24%), Positives = 123/329 (37%), Gaps = 52/329 (15%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEY 364
T + + + I + + D ++ VE F+D + + L Y
Sbjct: 1502 TATFDFALSQASLRQAPGHIALIGPDGLSHD-VTAVETFVFSDGVVRQKDAAPLVDDLFY 1560
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAA 422
A+ D+ Q ++ H+ +G EGRD F + YL + ++
Sbjct: 1561 YAANPDVWQA----QIDAEAHYAAYGWREGRDPNAAFSTGGYLAANPEVAAA----GLDP 1612
Query: 423 ARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
H+ G KEGR+P A F Y+A H + A D H+ G EG
Sbjct: 1613 LVHFAQAGWKEGRDPAAGFDVERYLARHPEARAAGLDP-------LSHYLAQGRAEGHVA 1665
Query: 482 --------------TFDSYLYLGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNPDA 523
FD+ YL S D+ R G A HY T+G +EGRNP+A
Sbjct: 1666 HTAIGRPADLAEQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNA 1725
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+A++ D+ A D H+ +G EGR + F+ YL + D+
Sbjct: 1726 VFDTKGYLAAYGDVAAAGIDP-------LAHYVRYGAAEGRDPSAGFDGKAYLAANSDVA 1778
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISG 609
HY+ +G EGR+ G
Sbjct: 1779 AA----GLNPMLHYLQYGAAEGRSAFADG 1803
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 18/152 (11%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK----HFYEFGLSEGRDIT- 398
+ D Y S D+ + +S H+ +G EGR+
Sbjct: 1666 HTAIGRPADLAEQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNA 1725
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ YL +Y D+ G D HY+ +G EGR+P A F Y+A++ D+ A
Sbjct: 1726 VFDTKGYLAAYGDVAAA-GID---PLAHYVRYGAAEGRDPSAGFDGKAYLAANSDVAAAG 1781
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ H+ +G EGR D +
Sbjct: 1782 LNP-------MLHYLQYGAAEGRSAFADGHFA 1806
>gi|238623421|emb|CAS06705.1| alkaline metalloprotease [Pseudomonas fluorescens bv. G]
Length = 277
Score = 204 bits (518), Expect = 5e-50, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 101/267 (37%), Gaps = 37/267 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 11 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNA 70
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V +TF E + D N + P + Y
Sbjct: 71 QQKAQAVLAMQSWADVAKVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 130
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 131 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 190
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 191 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRASDTTYGFNSNT 250
Query: 211 ------VQQKDSPFIQTIYDSGGDDLL 231
+ +++D GG+D L
Sbjct: 251 GRDFLSATSNADKLVFSVWDGGGNDTL 277
>gi|238623410|emb|CAS06699.1| alkaline metalloprotease [Pseudomonas chlororaphis subsp.
chlororaphis]
Length = 284
Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 100/278 (35%), Gaps = 43/278 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP YT ++ A +LRD + + H +S ++ +
Sbjct: 10 VNGKPSYTVDQAATQILRDGAAYQDLNGSGKIELTYTFLTSASSSTMYKHGIS-GFSQFS 68
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY-- 98
+ A ++ W+ V ++TF E + D N + P + Y
Sbjct: 69 AQQKAQAVLSMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDG 128
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 129 TSWYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDT 188
Query: 158 FLTSVMSYFMPQDSMMDASF----GYCATPMVSDIVAVQKIYGAP------------KGS 201
SVMSY+ ++ + S Y + P++ DI A+QK+YGA +
Sbjct: 189 RGYSVMSYWSESNTSQNFSKAGVEAYSSGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSN 248
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
G + + + +++D+GG D LD +
Sbjct: 249 TGRDF--LSATSSADKLVFSVWDAGGKDTLDFSGFTQN 284
>gi|163851117|ref|YP_001639160.1| beta strand repeat-containing protein [Methylobacterium extorquens
PA1]
gi|163662722|gb|ABY30089.1| autotransporter-associated beta strand repeat protein
[Methylobacterium extorquens PA1]
Length = 1632
Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats.
Identities = 81/329 (24%), Positives = 123/329 (37%), Gaps = 52/329 (15%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEY 364
T + + + I + + D ++ VE F D + + L Y
Sbjct: 1328 TASFDFALSQASLRQAPGHIALIGPDGLSYD-VTAVETFVFTDGVVRQKDAAPLVDDLFY 1386
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAA 422
A+ D+ Q ++ H+ +G EGRD F + YL + ++
Sbjct: 1387 YAANPDVWQA----QIDAEAHYAAYGWREGRDPNATFSTGGYLAANPEVAAA----GLDP 1438
Query: 423 ARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
H+ G KEGR+P A F Y+A H + A D H+ G EG
Sbjct: 1439 LVHFAQAGWKEGRDPAAGFDVELYLARHPEAQAAGLDP-------LSHYLAQGRAEGLAA 1491
Query: 482 --------------TFDSYLYLGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNPDA 523
FD+ YL S D+ R G A HY T+G +EGRNP+A
Sbjct: 1492 HTAIGRPADLAQQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNA 1551
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLW 580
F Y+A++ D+ A D H+ +G EGR S +F+ YL + D+
Sbjct: 1552 VFDTKGYLAAYGDVAAAGIDP-------LAHYVRYGAAEGRDPSASFDGKAYLAANSDVA 1604
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISG 609
HY+ +G EGR+ G
Sbjct: 1605 AA----GLNPMLHYLQYGAAEGRSAFADG 1629
Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 18/152 (11%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK----HFYEFGLSEGRDIT- 398
+ D Y S D+ + +S H+ +G EGR+
Sbjct: 1492 HTAIGRPADLAQQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNA 1551
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ YL +Y D+ G D HY+ +G EGR+P A F Y+A++ D+ A
Sbjct: 1552 VFDTKGYLAAYGDVAAA-GID---PLAHYVRYGAAEGRDPSASFDGKAYLAANSDVAAAG 1607
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ H+ +G EGR D +
Sbjct: 1608 LNP-------MLHYLQYGAAEGRSAFADGHFA 1632
>gi|317447643|emb|CBJ55052.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 275
Score = 203 bits (517), Expect = 7e-50, Method: Composition-based stats.
Identities = 63/272 (23%), Positives = 102/272 (37%), Gaps = 37/272 (13%)
Query: 6 PVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNPNAQE 53
P YT ++ A LLR+ + ++ K D+ T S ++ N +
Sbjct: 4 PSYTVDQAATQLLREGAAYRDFBGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQKA 63
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEINFD 105
A A+ W+ V ++TF E + D N + P + Y +
Sbjct: 64 QAALAMQSWADVANVTFTEKTSGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYL 123
Query: 106 KADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSV 162
+ + HEIGH LGL HPG YN G D Y D+ S+
Sbjct: 124 TNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGYSL 183
Query: 163 MSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE------- 210
MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 184 MSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNTGRDF 243
Query: 211 --VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 244 LSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 275
>gi|78185015|ref|YP_377450.1| metalloprotease [Synechococcus sp. CC9902]
gi|78169309|gb|ABB26406.1| metalloprotease [Synechococcus sp. CC9902]
Length = 513
Score = 203 bits (516), Expect = 8e-50, Method: Composition-based stats.
Identities = 82/349 (23%), Positives = 131/349 (37%), Gaps = 66/349 (18%)
Query: 44 ITELNPNAQ-EVARWALGEWSKVVDLTFEETSIH---SDIKFISS----NNGYVCTPRYD 95
+ Q ++A+ S ++ F + + I+ + G Y
Sbjct: 134 YANFSEKQQNDIAKL-FESLSDYANIRFIKVPDNNTVGTIRIGFNTITDEAGKWRPGIYA 192
Query: 96 SRYFMEINFDKADVW-RYGIGKGTIL------------SHNALHEIGHALGLMHPGSYNG 142
+ D+W K S LHEI HALGL HP +
Sbjct: 193 TADTPNPEPRGGDIWFNKNFTKDNFSTGLVENVGPATPSAVMLHEILHALGLEHPDNPKR 252
Query: 143 GYPVYGVDNDYENDSFLTSVMS-----------YFMPQDSMMDA-----------SFGYC 180
P + + ++M+ YF + + +G
Sbjct: 253 VTPKFARN-------REYTLMADEFSHRAEFTQYFKDNGEIASSLAEFGRSEIRKDYGVS 305
Query: 181 ATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+TPM DI +Q +YGA GN IYK PF +TI+D+ G D ++L+
Sbjct: 306 STPMTWDIAGLQYLYGANTKFQQGNTIYKYS---NTIPFYETIWDASGIDTINLSNF-KK 361
Query: 240 KNYIDLNTESWSSIG----------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++LN S++ N+ IA +TVIE+ +G SGND +IGNSANN
Sbjct: 362 DLVVNLNGGQLSTLSFDVADQNWSDKQHGNLGIAFNTVIENGIGGSGNDSIIGNSANNTL 421
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
++GND G G+D + ++K+ + + I+ D N L
Sbjct: 422 KGNAGNDTLSGKDGIDVLIGGSGQDIFKLQQGKGHAIIQDFNSGIDKIL 470
>gi|317447646|emb|CBJ55054.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 273
Score = 203 bits (516), Expect = 9e-50, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 101/269 (37%), Gaps = 37/269 (13%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLS-----------FDITELNPNAQE 53
P YT ++ A LLR + ++ K D+ T S ++ N +
Sbjct: 4 PSYTVDQAATQLLRXGAAYRDFXGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQKA 63
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEINFD 105
A A+ W+ V ++TF E + D N + P + Y +
Sbjct: 64 QAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYL 123
Query: 106 KADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSV 162
+ + HEIGH LGL HPG YN G D Y D+ S+
Sbjct: 124 TNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGYSL 183
Query: 163 MSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIEVQ----- 212
MSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 184 MSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNTGRDF 243
Query: 213 ----QKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 244 LSASSNADKLVFSVWDGGGNDTLDFSGFT 272
>gi|260577026|ref|ZP_05845006.1| Serralysin [Rhodobacter sp. SW2]
gi|259020782|gb|EEW24098.1| Serralysin [Rhodobacter sp. SW2]
Length = 841
Score = 203 bits (515), Expect = 1e-49, Method: Composition-based stats.
Identities = 108/420 (25%), Positives = 178/420 (42%), Gaps = 49/420 (11%)
Query: 7 VYTTERIADHLLR--DQYWSNYFIRYKPDVLT----THRLSFDITELNPNAQEVARWALG 60
V T + +A L ++Y+S P ++S+++T L +A+ AL
Sbjct: 142 VLTADEVAWQLTNNFERYFSGAGSANIPATAYDLSGGRQISYNVTGLTAPGAALAQQALQ 201
Query: 61 EWSKVVDLTFEETSIHSDIKFISSN-----NGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
WS V +TF++TS + I F + + T + + + +G
Sbjct: 202 MWSDVTGITFQQTSGAAQITFQNDSVDVEAFNSNVTSPDGTIISSTLQVSTGWLTTFGTT 261
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY-------FMP 168
+ +HE+GH+LGL H G+YNG YGVDN Y NDS S+MSY F
Sbjct: 262 MDSYSFETYVHELGHSLGLGHGGNYNGS-ATYGVDNYYLNDSPHLSIMSYMQAVNDEFDD 320
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYG-APKGSLGNNIYKIEVQQKDSP---------- 217
++ ++A F Y TPM++DI+A++ +YG + GN Y ++
Sbjct: 321 ANTFVNAQFRYVLTPMIADILAMRNLYGLSTTTRTGNTTYGYNSNTGNAALDAAVTLNDP 380
Query: 218 -----FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T++D+GG D ++L+ G IDLN + S + G NM IA TV+E+ +
Sbjct: 381 ANNNYVAFTVFDNGGTDTINLSGYSGS-QRIDLNQGASSDVLGGRLNMGIAYGTVVENAI 439
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G S D + GNSA N GND +G++G+DT +Y + I+ +A
Sbjct: 440 GGSAADSMTGNSAANSLSGLGGNDTLNGNTGVDTLIGGLGDDVY---VTDGGDIIVEAAA 496
Query: 333 HKQDFLS---------DVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
D + ++E L + +++ ++ L G D
Sbjct: 497 AGTDRVMSSASASLSANIENLTLTGAAAINAYGNALNNVITGNSANNVLSGGGGNDTLNG 556
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 9/163 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + T+ GDD+ D+ + + + + +S+ +N+T+
Sbjct: 460 GGNDTLNGNTGVDTLIGGLGDDVYVTDGGDIIVEAAAAGTDRVMSSASASLSANIENLTL 519
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G++ N+V+ GNSANNV GND +G++G DT +Y +
Sbjct: 520 TGAAAI-NAYGNALNNVITGNSANNVLSGGGGNDTLNGTTGTDTMIGGLGDDVYT---TD 575
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ +A D + + + +I Y
Sbjct: 576 GGDTLTEAAAAGTDRVMSSASYGLSVNLENLTLTGTAAINGYG 618
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+Y + G D + G + + + +S+ +N+T+ I + G++ + +
Sbjct: 660 VYTTDGGDAITEAAAAGTDR---VLSSASTSLSANVENLTLTGAAAI-NGYGNTLANQIS 715
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
GNS NNV +GND G +G D F + I R + V D
Sbjct: 716 GNSGNNVLNGGAGNDTLSGGAGADVFIFNTAPSAANIDRITDFAAVNDT 764
>gi|238623378|emb|CAS06683.1| alkaline metalloprotease [Pseudomonas sp. W31b]
Length = 278
Score = 202 bits (513), Expect = 2e-49, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 99/269 (36%), Gaps = 42/269 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFD-----------ITELNP 49
N KP +T ++ ADHLLR+ + + K D+ T S ++ N
Sbjct: 10 VNGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASNATMNKHGITGFSQFNT 69
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV 109
+ A A+ W+ V ++TF E + D N Y N +
Sbjct: 70 QQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNAKYNES 129
Query: 110 WRYG---------------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDY 153
G HEIGH LGL HPG YN G D DY
Sbjct: 130 GLDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADY 189
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 190 GQDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGANYNTRAGDTTYG 249
Query: 209 IE---------VQQKDSPFIQTIYDSGGD 228
+ +++D GG+
Sbjct: 250 FNSNTGRDFLSATSSADKLVFSVWDGGGN 278
>gi|84685857|ref|ZP_01013753.1| Possible Zn-dependent metalloprotease [Maritimibacter alkaliphilus
HTCC2654]
gi|84665950|gb|EAQ12424.1| Possible Zn-dependent metalloprotease [Rhodobacterales bacterium
HTCC2654]
Length = 622
Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats.
Identities = 79/323 (24%), Positives = 124/323 (38%), Gaps = 39/323 (12%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN----------GYVCTPRYDSR 97
+ + A A G V +LTF + F+ + GY P S
Sbjct: 159 SADQITRAMQAFGAIEAVTNLTFTRVDDPTSANFLFGLDDDELAVHNLLGYFHPPGEASA 218
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV-------YGVD 150
+N ++ D R + GT+ +HE+ H LGL HP G V +G
Sbjct: 219 GHGNLNGERWD--RSALVPGTLTQAILIHEVLHGLGLSHPHDTGGTSTVMDGVAVAFGDY 276
Query: 151 NDYENDSFLTSVMSYFMPQDSM-------MDASFGYCATPMVSDIVAVQKIYGAPKGSL- 202
+ + + MSY + + +GY PM DI A+Q +YGA +
Sbjct: 277 GTAGLNQGIYTTMSYNFGWNEGDWGSFAALSGGWGYQTGPMALDIAALQSMYGANLATAD 336
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW----------SS 252
G++IY + + ++I+D+GG D + G IDL + S+
Sbjct: 337 GDDIYDLPDLNQIGTGWRSIWDTGGTDTIRYA--GLRDAIIDLRPATLDYGPGGGGFLSA 394
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
TIAQ +IE+ +GNDV+IGN ANN GND+ G G D +
Sbjct: 395 ARSVAGGFTIAQGVLIENARTGTGNDVLIGNDANNALMSGRGNDLVRGGEGADRIIAHRG 454
Query: 313 SYLYKIYRFENAIIVYDANEHKQ 335
+ + E+ I ++
Sbjct: 455 ADTVEGGDGEDWISAGRGDDAVT 477
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 27/160 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG----------- 300
++ G + I+ ++V G G+D + N+ +GND+ G
Sbjct: 457 TVEGGDGEDWISAGRGDDAVTGGPGDDSIYAGRGNDRISGGAGNDILWGRKGRDDIDGGT 516
Query: 301 ----------------SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+G DT + + + + + D + E +
Sbjct: 517 GDDLIIAGPGGDRVRGGAGDDTVTLGFGADTFVFRQGDGHDTITDFRPARDRLEIGRELV 576
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + S + + ++ + D+ + M
Sbjct: 577 DSVDLVVASAVAEAGGVRIVFDAWHTVFLEGDFDLADLMD 616
>gi|254560811|ref|YP_003067906.1| amidase-like protein [Methylobacterium extorquens DM4]
gi|254268089|emb|CAX23964.1| putative amidase-related protein [Methylobacterium extorquens DM4]
Length = 1721
Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats.
Identities = 81/329 (24%), Positives = 122/329 (37%), Gaps = 52/329 (15%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEY 364
T + + + I + + D ++ VE F D + + L Y
Sbjct: 1417 TASFDFALSQASLRQAPGHIALIGPDGLSHD-VTAVETFVFTDGVVRQKDAAPLVDDLFY 1475
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAA 422
A+ D+ Q ++ H+ +G EGRD F + YL + ++
Sbjct: 1476 YAANPDVWQA----QIDAEAHYAAYGWREGRDPNAAFSTGGYLAANPEVAAA----GLDP 1527
Query: 423 ARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
H+ G KEGR+P A F Y+A H + A D H+ G EG
Sbjct: 1528 LVHFAQAGWKEGRDPAAGFDVERYLARHPEAQAAGLDP-------LSHYLAQGRAEGHVA 1580
Query: 482 --------------TFDSYLYLGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNPDA 523
FD+ YL S D+ R G A HY T+G +EGRNP+A
Sbjct: 1581 HTAIGRPADLAQQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNA 1640
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLW 580
F Y+A++ D+ A D H+ +G EEG S F+ YL + D+
Sbjct: 1641 VFDTKSYLAAYGDVAAAGIDP-------LAHYVRYGAEEGHDPSAGFDGKAYLAANSDVA 1693
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISG 609
HY+ +G EGR+ G
Sbjct: 1694 AA----GLNPMLHYLQYGAAEGRSAFADG 1718
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 18/152 (11%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK----HFYEFGLSEGRDIT- 398
+ D Y S D+ + +S H+ +G EGR+
Sbjct: 1581 HTAIGRPADLAQQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPNA 1640
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ YL +Y D+ G D HY+ +G +EG +P A F Y+A++ D+ A
Sbjct: 1641 VFDTKSYLAAYGDVAAA-GID---PLAHYVRYGAEEGHDPSAGFDGKAYLAANSDVAAAG 1696
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ H+ +G EGR D +
Sbjct: 1697 LNP-------MLHYLQYGAAEGRSAFADGHFA 1721
>gi|257092498|ref|YP_003166139.1| Serralysin [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257045022|gb|ACV34210.1| Serralysin [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 1598
Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats.
Identities = 96/385 (24%), Positives = 140/385 (36%), Gaps = 54/385 (14%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFIS 83
Y + + LN Q A AL W ++ T + S+I+F +
Sbjct: 6 TYAFPTAASGIYGSQELSGFVGLNAQQQAQAERALQTWDDLIAPDMVRTTATTSNIEFGT 65
Query: 84 SNNGYVCTPRYD-SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
S G Y + + + AD+ +G+ + ++ +HEIGHALGL H G YNG
Sbjct: 66 STTGVSYAHAYFPTTGSVWFSRSYADLMSPQVGQHSFMA--YVHEIGHALGLDHMGDYNG 123
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDS------------MMDASFGYCATPMVSDIVA 190
DS + SVMSYF P + D TPMV+D++A
Sbjct: 124 SG---SWTPSSYEDSGVYSVMSYFGPNMNSGSGQVAWADWVGADGKLYSPQTPMVNDVMA 180
Query: 191 VQKIYGAPKGS-LGNNIYKI--EVQQKDSPFIQ---------TIYDSGGDDLLDLTLIGG 238
+Q IYGA + G+ +Y V +P TIYDS G D L+L+
Sbjct: 181 IQAIYGAETTTRTGDTVYGFGSNVTGAMAPIFDFTLNANPIVTIYDSAGIDTLNLSGWN- 239
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
I+L S+SS N+ IA IE+ VG S D + GN N +GND
Sbjct: 240 TACTINLAPGSYSSGNSMTYNIAIAYTCDIENAVGGSAGDQITGNLLANRLDGGAGNDTL 299
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD----------------------ANEHKQD 336
G G D A + ++++ D
Sbjct: 300 SGGGGDDVLVAGAGDDVLDGGEGTDSVVFSGTWGAYSYTCTNLYATTFAFTFYGAATGTD 359
Query: 337 FLSDVERLRFADQCIDSVNVKQRSI 361
L +E FAD + +
Sbjct: 360 TLRGIETFVFADVTKYASELSGAGP 384
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 64/208 (30%), Gaps = 15/208 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNM 260
G++IY + + + +GG D + + IG +
Sbjct: 1121 GSDIYLVGLASDHAAAEIADSGNGGSDEVRFAASSSGTLTLFAGDTGIERVVIGSGLGEV 1180
Query: 261 TIAQHTV--------IESVV---GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ T+ + + + G++G +V+ G + + +G D G G DT
Sbjct: 1181 AVSSGTLALDVDASRVANALSVLGNAGANVLTGTAYADRLDGGAGADRLIGGGGADTLIG 1240
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A + +Y + + I S V+ + A+ ++ A
Sbjct: 1241 GAGNDVYVVDSGDAIIEASTLASEIDRVESYVDWILGANLENLTLLGTGNLAGTGNALNN 1300
Query: 370 DLIQVIGQDVFES--MKHFYEFGLSEGR 395
L G + + G + R
Sbjct: 1301 TLTGNAGANRLDGGQGADILLGGAGDDR 1328
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+++ + + G++ D + G + + GND G +G DT A
Sbjct: 1484 DASRVANALSLLGNAGANVLTGTAYADTLDGGAGADRLIGGDGNDRLIGGAGNDTLTGGA 1543
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + + + ++ D DF+S + ++ + +V +
Sbjct: 1544 GADQFVLTQALSSTTNRDVLA---DFVSGTDTIQLSVSVFRAVTSR 1586
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G LGN+ Y ++++ + + + G D L + + + + + +N
Sbjct: 759 GGLGNDTYLLDMEGELANVTEN--AGQGTDTLTVVYANTSA----VKSIALTGNLANIEN 812
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + +V+G+ + + GN++ N ++GND DG G D +YK+
Sbjct: 813 VLL-SGAGLFNVLGNGLANALTGNASVNRLEGAAGNDTLDGQGGADQLIGGQGDDVYKVD 871
Query: 320 RFENAIIVYDANEHKQDFL 338
+ + ++ + + D +
Sbjct: 872 QLGD--VLIENADEGSDTV 888
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 252 SIGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I E +++ T +E+ V+ + + GNS NN +SGN++ DG +GLDTF
Sbjct: 701 GIDRVESSVSFTLGTNLENLVLTGNADSNGTGNSQNNQLTGNSGNNILDGKAGLDTFAGG 760
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS-------------------DVERLRFADQC- 350
+ Y + V + D L+ ++E + +
Sbjct: 761 LGNDTYLLDMEGELANVTENAGQGTDTLTVVYANTSAVKSIALTGNLANIENVLLSGAGL 820
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + L AS L G D +
Sbjct: 821 FNVLGNGLANALTGNASVNRLEGAAGNDTLDG 852
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 57/142 (40%), Gaps = 33/142 (23%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+LG+ +Y+ + YD+GG D +D ++ ++G + +N+
Sbjct: 1333 NLGDKVYETTTST-------SQYDAGGTDTVDSSINW--------------TLGNFVENL 1371
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ SGN IGN+ N ++G +V DG +G+D S +Y +
Sbjct: 1372 TL----------TGSGNLSGIGNALANTLRGNAGINVLDGKAGVDVLDGGEGSDIYLVGL 1421
Query: 321 FEN--AIIVYDANEHKQDFLSD 340
+ A + D+ D +
Sbjct: 1422 ASDHAAAEIADSGNGGSDEVRF 1443
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 33/142 (23%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+LG+ +Y+ YD+GG D +D ++ ++G + +N+
Sbjct: 1041 NLGDKVYETTTSTSA-------YDAGGIDTVDSSINW--------------TLGNFVENL 1079
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ SGN IGN+ N ++G +V DG +G+D S +Y +
Sbjct: 1080 TL----------TGSGNLSGIGNALANTLRGNAGINVLDGKAGVDVLDGGEGSDIYLVGL 1129
Query: 321 FEN--AIIVYDANEHKQDFLSD 340
+ A + D+ D +
Sbjct: 1130 ASDHAAAEIADSGNGGSDEVRF 1151
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 4/123 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG- 273
I T+ G D + +G V + S I E + +E++
Sbjct: 938 GGAGIDTLIGGAGGDTYVVDQVGDVLVE---TSSLASEIDRVESYVDWILGANLENLTLL 994
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GN GN+ NN ++G + DG G D A Y + + + +
Sbjct: 995 GNGNLAGTGNALNNTLIGNAGANRLDGGQGADILLGGAGDDRYVVDNLGDKVYETTTSTS 1054
Query: 334 KQD 336
D
Sbjct: 1055 AYD 1057
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 26/196 (13%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMT 261
G+++YK+ D GD L++ G + L+ S + G + +N T
Sbjct: 864 GDDVYKV--------------DQLGDVLIENADEGSDTVLVALSASGTSYVLGNHLENAT 909
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ I ++ G+ +V+ GN+ N +G D G +G DT+ +
Sbjct: 910 VVAAVAI-NLTGNDLANVLTGNALANRLDGGAGIDTLIGGAGGDTYVVDQVGDVL----- 963
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ S V+ + A+ ++ A LI G + +
Sbjct: 964 ---VETSSLASEIDRVESYVDWILGANLENLTLLGNGNLAGTGNALNNTLIGNAGANRLD 1020
Query: 382 S--MKHFYEFGLSEGR 395
G + R
Sbjct: 1021 GGQGADILLGGAGDDR 1036
>gi|28870362|ref|NP_792981.1| metalloprotease [Pseudomonas syringae pv. tomato str. DC3000]
gi|28853609|gb|AAO56676.1| metalloprotease, putative [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 535
Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats.
Identities = 102/424 (24%), Positives = 158/424 (37%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + + D L A+ AL WS V
Sbjct: 29 PFWLGDATGTHLTYSFHTAD---SVYATIYSGTQEPDDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+TF E DI+F SNN + + + Y DVW
Sbjct: 86 ADITFTEVKDTPENVGDIRFGGSNN--LQSTEFGQAYTAGTEGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL HP Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHPFE-GTQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGN NV G D+ G G DT+ L + ++N
Sbjct: 310 IGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEGVDTLKITYDNTSATA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ +++ A + L+ +G D
Sbjct: 370 AVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDTYVIDQADELALVQEK--ANEGVDTLKITYDNTSATAAVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGADIMTGGTGADRFV 441
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAETGKGAASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|288963034|ref|YP_003453313.1| hypothetical protein AZL_f00090 [Azospirillum sp. B510]
gi|288915286|dbj|BAI76769.1| hypothetical protein AZL_f00090 [Azospirillum sp. B510]
Length = 827
Score = 200 bits (508), Expect = 8e-49, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 130/316 (41%), Gaps = 15/316 (4%)
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D F G+ G D+ + P +Y + + R + +++
Sbjct: 114 DGFVGADGDDSVYLGVPGGRSFDGGGGIDRAIYGTDPRRYALQDG--SHRAETPVVVALD 171
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
R ++ D++ + + FD+ YL + DL F
Sbjct: 172 GGGRRYAVVSSRSADVLTDVEMVTIDGRTAALVA-------FAFDARGYLAANRDLAVAF 224
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G + AAA HY G EGR+ F AL Y+ ++ DL+ H+ G
Sbjct: 225 GDNVVAAAAHYAWSGRNEGRSLGGFDALGYLGANPDLLGVVGADA---NAALHHYLVSGA 281
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
EGR FD Y YL S D+ V+G D AA HY G++EGR F AL YIAS+ D
Sbjct: 282 REGRTAGFDPYGYLASNPDVLAVYGLDPVAALIHYGQSGLREGRTATGFDALGYIASYPD 341
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
LI AF +A H+ G EGR ITF+ YL + D+ G + +AA HYI
Sbjct: 342 LITAFGTD---GKAAVRHYLTSGLAEGRGITFDAAAYLAANPDVAAATGGNPAAAEAHYI 398
Query: 596 THGMKEGRALGISGMQ 611
G +EGR + Q
Sbjct: 399 IAGRREGRMAHPAPRQ 414
Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats.
Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 9/179 (5%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLRN 497
AF A Y+A++ DL AF D V H++ G EGR + FD+ YLG+ DL
Sbjct: 207 AFDARGYLAANRDLAVAFGDN---VVAAAAHYAWSGRNEGRSLGGFDALGYLGANPDLLG 263
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
V G+D AA HY+ G +EGR F Y+AS+ D++ + P A H+
Sbjct: 264 VVGADANAALHHYLVSGAREGRTA-GFDPYGYLASNPDVLAVYGLDP---VAALIHYGQS 319
Query: 558 GYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSV 615
G EGR+ T F+ Y+ SY DL FG+D AA +HY+T G+ EGR + + +
Sbjct: 320 GLREGRTATGFDALGYIASYPDLITAFGTDGKAAVRHYLTSGLAEGRGITFDAAAYLAA 378
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 4/137 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY--- 309
IGG N TI+ +++ G++GNDV++G + +G D+ G +G D
Sbjct: 544 IGGGAGNDTISGLAGNDTLFGNTGNDVLLGGDGADQLEGGAGRDLLFGGAGDDLLRGDII 603
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ N + D + V+ L + D + + + Y
Sbjct: 604 DVAGNDTLLGEEGNDWLDSGPGNDWLDGGAGVDTL-YGGIGSDVLRGGSGDDILFGDVYT 662
Query: 370 DLIQVIGQDVFESMKHF 386
D I + +S+ +
Sbjct: 663 DRSHAISVNPNDSVTGY 679
Score = 44.0 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G + N+ ++ +D DG +G+D+F Y + ++ + + D L
Sbjct: 435 VLTGTTGNDTLSGTADSDAVDGLAGVDSFVLTGALASYSL-SIDSGGALLISGPDGTDML 493
Query: 339 SDVERLRFADQ 349
+ +E L+ D
Sbjct: 494 TSIELLQATDG 504
>gi|238623404|emb|CAS06696.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 280
Score = 199 bits (507), Expect = 9e-49, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 101/270 (37%), Gaps = 44/270 (16%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 12 VNGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFS 70
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 71 NLQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHT 130
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ + G HEIGH LGL HPG YN G D D
Sbjct: 131 SGTDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 190
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 191 YGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 250
Query: 208 KIE---------VQQKDSPFIQTIYDSGGD 228
+ +++D GG+
Sbjct: 251 GFNSNTGRDHLSATSNADKLVFSVWDGGGN 280
>gi|302133296|ref|ZP_07259286.1| metalloprotease, putative [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|331016597|gb|EGH96653.1| metalloprotease, putative [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 535
Score = 199 bits (507), Expect = 1e-48, Method: Composition-based stats.
Identities = 102/424 (24%), Positives = 158/424 (37%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + + D L A+ AL WS V
Sbjct: 29 PFWLGDATGTHLTYSFHTAD---SVYATIYSGTQEPDDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+TF E DI+F SNN + + + Y DVW
Sbjct: 86 ADITFTEVKDTPENVGDIRFGGSNN--LQSTEFGQAYTAGTEGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL HP Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHPFE-GTQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGN NV G D+ G G DT+ L + ++N
Sbjct: 310 IGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEGVDTLKITYDNTSATA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ +++ A + L+ +G D
Sbjct: 370 AVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDTYVIDQADELALVQEK--ANEGVDTLKITYDNTSATAAVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGADIMTGGTGADRFV 441
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAETGKGAASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|213969839|ref|ZP_03397973.1| metalloprotease [Pseudomonas syringae pv. tomato T1]
gi|213925387|gb|EEB58948.1| metalloprotease [Pseudomonas syringae pv. tomato T1]
Length = 535
Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats.
Identities = 103/424 (24%), Positives = 158/424 (37%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + + D L A+ AL WS V
Sbjct: 29 PFWLGDATGTHLTYSFHTAD---SVYATIYSGTQEPDDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+TF E DI+F SNN + + + Y DVW
Sbjct: 86 ADITFTEVKDTPENVGDIRFGGSNN--LQSTEFGQAYTAGTEGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT LHE GHALGL HP Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFLHETGHALGLKHPFE-GTQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGN NV G D+ G G DT+ L + ++N
Sbjct: 310 IGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEGVDTLKITYDNTSATA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ +++ A + L+ +G D
Sbjct: 370 AVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDTYVIDQADELALVQEK--ANEGVDTLKITYDNTSATAAVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGADIMTGGTGADRFV 441
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAETGKGAASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|301384997|ref|ZP_07233415.1| metalloprotease, putative [Pseudomonas syringae pv. tomato Max13]
Length = 535
Score = 199 bits (505), Expect = 2e-48, Method: Composition-based stats.
Identities = 103/424 (24%), Positives = 159/424 (37%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + + D L A+ AL WS V
Sbjct: 29 PFWLGDATGTHLTYSFHTAD---SVYATIYSGTQEPDDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+TF E DI+F SNN + + + Y DVW
Sbjct: 86 ADITFTEVKDTPENVGDIRFGGSNN--LQSTEFGQAYTAGTEGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT LHE GHALGL HP Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFLHETGHALGLKHPFE-GTQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGN NV G D+ G G DT+ L + ++N
Sbjct: 310 IGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEGVDTLKITYDNTSATA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L+++E + D+ +++ A + L+ +G D
Sbjct: 370 AVIDLNAGPLANLENVHLKGEGEFTLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 68/194 (35%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN +++
Sbjct: 329 GGLGNDTYVIDQADELALVQEK--ANEGVDTLKITYDNTSATAAVIDLNAGPLANLE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGADIMTGGTGADRFV 441
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAETGKGAASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|238623402|emb|CAS06695.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 274
Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 102/274 (37%), Gaps = 44/274 (16%)
Query: 7 VYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQE 53
++ ++ ADHLLR+ + + H +S ++ + +
Sbjct: 1 SFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFSNLQKG 59
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF------ 99
A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 60 QAVLAMQSWADVANVTFTERASGGDFHMTFGNYSSGQDGAAAFAYLPGTNEKYHTSGTDG 119
Query: 100 -MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDS 157
+ + G HEIGH LGL HPG YN G D DY D+
Sbjct: 120 TSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYRDADYGQDT 179
Query: 158 FLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE-- 210
SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 180 RGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSN 239
Query: 211 -------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 240 TGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFT 273
>gi|257485399|ref|ZP_05639440.1| serralysin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 214
Score = 198 bits (503), Expect = 3e-48, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VD 150
R D + + D + G HEIGH LGL HPG YN G D
Sbjct: 1 SRTDGQSWYL--VDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTYKD 58
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL-GNN 205
Y D+ SVMSY+ ++ + G Y + P++ DI AVQ++YGA + G+
Sbjct: 59 ASYAEDTRGYSVMSYWSESNTDQNFVKGGVAAYSSAPLLDDIAAVQQLYGANMSTRAGDT 118
Query: 206 IYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+Y S + +++D GG D LD + I+LN S+S +GG
Sbjct: 119 VYGFNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFSGFT-QNQKINLNAASFSDVGGM 177
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
N++IA+ V+E+ VG SGND++IGN+A N +
Sbjct: 178 VGNVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGA 214
>gi|259414826|ref|ZP_05738749.1| alkaline metalloproteinase [Silicibacter sp. TrichCH4B]
gi|259349277|gb|EEW61024.1| alkaline metalloproteinase [Silicibacter sp. TrichCH4B]
Length = 692
Score = 198 bits (503), Expect = 3e-48, Method: Composition-based stats.
Identities = 100/446 (22%), Positives = 160/446 (35%), Gaps = 71/446 (15%)
Query: 1 MHNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWAL 59
M + + + IA++L R+ W I + D L+ + A+
Sbjct: 1 MPSYPSSFLPQSIANNLTREGRHWDKTTITFSFDDTLPTSGGVSSVTLDTIQRSWINEAI 60
Query: 60 GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------- 112
V+D+ F + + DI F NG T Y ++ + D Y
Sbjct: 61 ALLEDVIDVDFVQVTSGGDISF----NGVSGTSTYTQTFYYLSSGDITSSDVYLSQERDE 116
Query: 113 ----GIGKGTILSHNALHEIGHALGLMHPGSY-NGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ G +HE+ H +GL+HP Y N G Y + D+ D+ S+MSYF
Sbjct: 117 NLGENLSYGNQGFQTIIHELLHTVGLLHPSDYGNYGSDDYFLAADFREDTIRHSIMSYFD 176
Query: 168 PQDSMMDASFGY----------CATPMVSDIVAVQKI--------YGAPKGSL-GNNIYK 208
P +++ T MV DI+A+ + YG + GN Y
Sbjct: 177 PAYDGSGSTWAAFDGASFSKIDAQTMMVYDILALSEGSHNGLFSGYGLNLTTRAGNTTYG 236
Query: 209 IEVQQKDSPFIQ---------TIYDSGGDDLLDLTLIGGVKNY----------------- 242
TIYD+GG D LDL+ K
Sbjct: 237 YNATNGIRQVFNFDENGAPALTIYDAGGIDTLDLSGDDVSKQRTVTYAVDGSFTFGMTDR 296
Query: 243 ----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
IDL + ++SS G N+ IA T+IE+ +G+ D + GN + N G+D
Sbjct: 297 VSAIIDLTSGAYSSTHGMTNNIGIAFGTIIENAIGTVFRDNIKGNGSQNQLHGGRGDDTI 356
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ--DFLS--DVERLRFADQCIDSV 354
G SG D + + L +A+ + + Q D LS V+ L + +
Sbjct: 357 FGMSGDDHIHGGSGNDLLLGGLGADALDGGEGIDRAQYSDALSAVSVDLLHSGNNSASAA 416
Query: 355 NVKQRSILE-YTASYEDLIQVIGQDV 379
S+ + + Y D ++ G D
Sbjct: 417 GDTFTSVENLFGSGYSDTLKGDGADN 442
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 61/196 (31%), Gaps = 29/196 (14%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLD 232
GY T A I+G S G+ ++ + + G DLLD
Sbjct: 427 FGSGYSDTLKGDG--ADNWIWG---WSGGDTLFGRDGDDILYGGSGNDIMLGGRGADLLD 481
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGSS-------------- 275
Y D T N+ A IE++ GS
Sbjct: 482 GGDGVDRAQYSDALTRVGVDFLHSTGNIGEAAGDAYVSIENIFGSGHGDDLRADNDDNAI 541
Query: 276 ----GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+D++ G N+ SGND G++G DT F + + L + + + +
Sbjct: 542 WGWIGDDILYGRDGNDYLSGGSGNDTLSGAAGSDTLFGGSGADLLYGGNGDGSEDTFLFS 601
Query: 332 EHKQDFLSDVERLRFA 347
D + + F
Sbjct: 602 S-VNDSQAGQRDVVFG 616
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 8/159 (5%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T +E++ GS +D + G+ A+N + SG D G G D + + + + + A
Sbjct: 421 TSVENLFGSGYSDTLKGDGADNWIWGWSGGDTLFGRDGDDILYGGSGNDI--MLGGRGAD 478
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ + + SD D + N+ + + Y + G D+
Sbjct: 479 LLDGGDGVDRAQYSDALTRVGVDFLHSTGNIGEAAGDAYVSIENIFGSGHGDDLRADNDD 538
Query: 386 FYEFGLSEGRDITF--DSYLYL---GSYDDLRNVFGSDR 419
+G G DI + D YL D L GSD
Sbjct: 539 NAIWGWI-GDDILYGRDGNDYLSGGSGNDTLSGAAGSDT 576
>gi|260428691|ref|ZP_05782669.1| serralysin (Extracellular metalloproteinase) [Citreicella sp. SE45]
gi|260420285|gb|EEX13537.1| serralysin (Extracellular metalloproteinase) [Citreicella sp. SE45]
Length = 772
Score = 198 bits (502), Expect = 3e-48, Method: Composition-based stats.
Identities = 97/407 (23%), Positives = 151/407 (37%), Gaps = 37/407 (9%)
Query: 6 PVYTTERIADHLLRDQ-YWSNYF---------IRYKPDVLTTHRLSFDITELNPNAQEVA 55
P Y T A LLRD W++ IR + L+ A
Sbjct: 127 PSYDTAMAAGALLRDDLAWTSTAGQGVTVTWGIRASGQPQDAAGNAAGFATLSTAQAAAA 186
Query: 56 RWALGEWSKVVDLTFEETSIHS---DIKFISSNNGYVCTPRYDSRYFMEINFDK---ADV 109
A+ +S V L + + + + YF DV
Sbjct: 187 AEAIALYSGVSGLDLRQVNPGGTTNNATILFGAYSSDYDGAGAYAYFPGPTSSGSPAGDV 246
Query: 110 WRYGIGK-------GTILSHNALHEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFL 159
W G+ LHE+GHA+GL HPG YN GG YG Y DS+
Sbjct: 247 WINNASVSADSLPVGSFDHFVLLHELGHAVGLSHPGDYNATAGGVITYGDQAAYLEDSYQ 306
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQ------ 212
SVMSYF ++ + GY T ++ DI A+Q++YG G+++Y
Sbjct: 307 YSVMSYFDESNT-TSSIGGYPDTLLLHDIQALQQLYGVNYGYHAGDSVYGFNSTLGGAYD 365
Query: 213 -QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
++S +I+D GG D LD++ GG +I L +S IGGY N++IA IE
Sbjct: 366 FSQNSDPFLSIWDGGGRDRLDVSGFGG-NQFITLVEGEFSDIGGYRGNVSIAYGAGIEEA 424
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG SG+D + GN+ +N +D+ G G DT + + ++
Sbjct: 425 VGGSGDDTLQGNALDNTLLGGGHDDLIRGGDGNDTIDGEGGADSID-GDAGHDLLTGGRG 483
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + + + ++ + + G D
Sbjct: 484 DDLIRGGTGADTIDGSGGDDTLYGDSSTDLIYGGLDNDLIAGGTGSD 530
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 66/176 (37%), Gaps = 13/176 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D +D GG + ID + + G + I T +++ GS G+D + G+S
Sbjct: 454 GDGNDTID--GEGGADS-IDGDAGHD-LLTGGRGDDLIRGGTGADTIDGSGGDDTLYGDS 509
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ ++ + ND+ G +G DT + A + N DF+S +
Sbjct: 510 STDLIYGGLDNDLIAGGTGSDTIYGDAGDDSL----YGNTAFDTIYGGDGDDFISSGDGA 565
Query: 345 RFADQCIDSVNV---KQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGR 395
F D S + +L + + G DV ++ + G + R
Sbjct: 566 DFVDGGAGSDMIYGRSGVDLLHGGDDNDSMWGSEGDDVMYGDAGNDYLSGGSALDR 621
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 25/141 (17%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL------DLTLIGGVKNYI-------- 243
G+ + IY + TIY GDD + D G + I
Sbjct: 526 GTGSDTIYGDAGDDSLYGNTAFDTIYGGDGDDFISSGDGADFVDGGAGSDMIYGRSGVDL 585
Query: 244 ----DLNTESWSS-----IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
D N W S + G N ++ + ++ + G GND + GN + + +G
Sbjct: 586 LHGGDDNDSMWGSEGDDVMYGDAGNDYLSGGSALDRLQGGDGNDTLYGNFGEDQLWGDAG 645
Query: 295 NDVFDGSSGLDTFFYYAPSYL 315
ND G SG DT +
Sbjct: 646 NDELYGGSGYDTLRGGDGNDT 666
>gi|329848423|ref|ZP_08263451.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843486|gb|EGF93055.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1374
Score = 198 bits (502), Expect = 4e-48, Method: Composition-based stats.
Identities = 96/478 (20%), Positives = 155/478 (32%), Gaps = 92/478 (19%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS--------FDITELNPNAQ 52
+ + + YT ++ D +L W+ I + + + N Q
Sbjct: 115 LIDGRYEYTGNQLVDAVLFGSRWTVTNITFSFPATAEFYETPYYEPGHLTNHIPFNAAQQ 174
Query: 53 EVARWALGEWSKVVDLTFEETS----IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD 108
AR+A + +TF E + H I+ ++N + F + D
Sbjct: 175 TAARYAFSLVAGYTSVTFTEVTESAETHGIIRLSQTDNDTALGSAEGN--FPGSDASDGD 232
Query: 109 VWRYGIGK--------GTILSHNALHEIGHALGLMHPGSY------------NGGYPVYG 148
+W + G +HEIGH LGL H +G P YG
Sbjct: 233 IWFGSTNQPFYLTPAIGNWGQATMMHEIGHTLGLKHGQDNYTTLDLTNGGYLDGPGPHYG 292
Query: 149 VDNDYEN-DSFLTSVMSYFMPQD---SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLG 203
N D + S+M+Y S + T M +DI A+Q +YGA
Sbjct: 293 TAALPANRDGWAWSLMTYRSAPGFTASFQGDRYNQPQTYMQADIAALQFMYGANFTSHAT 352
Query: 204 NNIYKIEVQQKD-------------------SPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+++Y + +T++D G D +L ID
Sbjct: 353 DSVYTFSTTTGEMFINGVGQGTPEINAATGIGKIFRTLWDGDGVDTYNLANFS-DNQTID 411
Query: 245 LNTESWSSIG------------------GYEKNMTIAQHTV---IESVVGSSGNDVVIGN 283
L +S+ G N + Q V IE+ + GND++IGN
Sbjct: 412 LRPGQFSTFSQAQLGDSRPLVTGFTAQPGNIANALLYQGDVRSLIENAIAGVGNDILIGN 471
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---- 339
A N + GNDV DG +G D A + + + +V +A+ H D ++
Sbjct: 472 QAANALTGNDGNDVLDGGAGDDVMTGGAGDDTFGVDSSGD--VVTEASGHGTDLIAATVS 529
Query: 340 -----DVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
DVE L ID + + A L + G D +
Sbjct: 530 YTLGEDVEHLTLTGTANIDGTGNGLANQITGGAGSNVLNGLDGNDTLTGSYEYRTAAQ 587
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 18/134 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LG++ Y ++ + + S G D + ++ ++ G +
Sbjct: 961 SGGLGDDTYVVDETGD----VVSELSSQGSDTVRASVTF--------------TLVGKQV 1002
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I + G+S N+++ GN A NV S+G+D +G++G D+ A +
Sbjct: 1003 ETVILTGVAAINATGNSFNNLLSGNDAANVLNGSAGSDTLNGAAGNDSLIGGAGADSLMG 1062
Query: 319 YRFENAIIVYDANE 332
++ ++ DA +
Sbjct: 1063 GLGDDTYVIDDAGD 1076
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 23/190 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y ++ + + G D + ++ +WS G ++
Sbjct: 782 GGTGNDTYVVDSADD----VVSEGAGAGTDTV-------------ISAVTWSLAGREIEH 824
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+T+ I+ G++ +++ GNS NN G D G++G DT+ A + ++
Sbjct: 825 LTLTGAGDID-ATGNAMANLLTGNSGNNQLDGGDGADSLTGAAGNDTYVVGAGDVVTELA 883
Query: 320 RFENAIIVYDANEHKQD-----FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I++ D L+ E + + D
Sbjct: 884 GEGTDIVLSAVTWTLSDGVEILTLTGSEDIDGTGNSQANTVTGNGGANHLNGGGGDDALS 943
Query: 375 IGQDVFESMK 384
G
Sbjct: 944 GGAGSDSLAG 953
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 13/120 (10%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G S + GND DG +G+D + Y + ++ +V +
Sbjct: 749 GNDTLDGGSGEDSLSGGLGNDWLDGGAGMDALDGGTGNDTYVVDSADD--VVSEGAGAGT 806
Query: 336 DFL----------SDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + ++E L ID+ ++L + L G D
Sbjct: 807 DTVISAVTWSLAGREIEHLTLTGAGDIDATGNAMANLLTGNSGNNQLDGGDGADSLTGAA 866
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 56/189 (29%), Gaps = 8/189 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSSIGG 255
G+ GN+ Y + + T G D++ + + L G
Sbjct: 863 TGAAGNDTYVVGAGD-----VVTELAGEGTDIVLSAVTWTLSDGVEILTLTGSEDIDGTG 917
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T+ + + G G+D + G + ++ +GND G G DT+ +
Sbjct: 918 NSQANTVTGNGGANHLNGGGGDDALSGGAGSDSLAGGTGNDTMSGGLGDDTYVVDETGDV 977
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + V + + I++ ++L + L
Sbjct: 978 VSELSSQGSDTVRASVTFTLVGKQVETVILTGVAAINATGNSFNNLLSGNDAANVLNGSA 1037
Query: 376 GQDVFESMK 384
G D
Sbjct: 1038 GSDTLNGAA 1046
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 52/179 (29%), Gaps = 26/179 (14%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIG 254
G GN+ Y I+ + + GG D++ +L I+L
Sbjct: 1214 TGGAGNDTYYIQNAGDNVVEL----GGGGTDVIYSAVTYSLNARYAEIINLT-------- 1261
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
T + G+S ++ + GN N G D+ G G D F + +
Sbjct: 1262 ----------GTANINATGNSLSNTLTGNDGINTLNGKGGTDILTGGLGADIFLFETGAG 1311
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I F +++ + A + I A D++
Sbjct: 1312 SDTIADFSAFQNDSINVNAYTGGIANNGLVTQAGGNVLITLGGSNVITVTGAVVADVLA 1370
>gi|330890304|gb|EGH22965.1| metalloprotease [Pseudomonas syringae pv. mori str. 301020]
Length = 535
Score = 197 bits (501), Expect = 5e-48, Method: Composition-based stats.
Identities = 104/424 (24%), Positives = 156/424 (36%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P ++ + HL + +N + + D L AR ALG WS V
Sbjct: 29 PFWSGDSTGTHLTYSFHTAN---SVYATDYSRSQEPSDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+ F E DI+F + + Y Y DVW
Sbjct: 86 ADIKFTEVQDTPDNVGDIRF--GGFKSLQSTEYGQAYAPGTLGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL H Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGNS +NV G D G G DT+ L + ++N V
Sbjct: 310 IGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEGIDTLKITYDNTSPVA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ ++L A + L+ +G D
Sbjct: 370 TVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDTYVIDQAGELALVQEK--ANEGIDTLKITYDNTSPVATVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFV 441
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAEMGKGHASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|77460926|ref|YP_350433.1| peptidase M10A and M12B, matrixin and adamalysin [Pseudomonas
fluorescens Pf0-1]
gi|77384929|gb|ABA76442.1| putative metallopeptidase with Hemolysin-type calcium-binding
region [Pseudomonas fluorescens Pf0-1]
Length = 1133
Score = 197 bits (500), Expect = 7e-48, Method: Composition-based stats.
Identities = 93/378 (24%), Positives = 140/378 (37%), Gaps = 44/378 (11%)
Query: 29 RYKPDVLTTHRLSFD-ITELNPNAQEVARWALGEWSKVVDLTFE----ETSIHSDIKFIS 83
+ ++ + L + AL WS V ++TF + D++F
Sbjct: 50 TSYFANAYSSVNEYNAVFSLYTGQKTAISNALSTWSAVANVTFTMVRESAASVGDLRFG- 108
Query: 84 SNNGYVCTPR--YDSRYFMEINFDKADVWRYG------IGKGTILSHNALHEIGHALGLM 135
GY Y + DVW KG+ +HEIGHA+GL
Sbjct: 109 ---GYSGMDNKTAAWAYLPDNTPKGGDVWIGPSTDELFPSKGSYDYLTFVHEIGHAIGLK 165
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
HP S P D +VMSY TPMV DI+A+Q +Y
Sbjct: 166 HPFSAGTLNPTVLQP---LLDDVKYTVMSYNDNYSYQ-------PTTPMVLDILAIQSLY 215
Query: 196 GAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
GA GN Y Q+ +TI+D+GG+D +D + I+LN +S IG
Sbjct: 216 GANGLWQSGNTTYSWAPNQQ---IFETIWDAGGNDTIDASNQ-LASVRINLNEGQYSQIG 271
Query: 255 GYEKNMT----------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N+T IA IE+ VGS D +IGN+ +NV G D +G +G
Sbjct: 272 KAFTNLTTNAAFNEGLGIAYGAKIENAVGSDFGDWLIGNALDNVLNGRGGADTMEGGAGN 331
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSIL 362
DT++ + + I + ++VE L + +++ + L
Sbjct: 332 DTYYVDNVGDVVIERGSSLSEIDTVISTISYTLGANVENLILQGGAENLNATGNALNNTL 391
Query: 363 EYTASYEDLIQVIGQDVF 380
A L G D+
Sbjct: 392 RGNAGNNLLDGGTGADIM 409
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
G GN+ Y ++ + + + + G D L + G IDLN S++ +E
Sbjct: 935 GGTGNDTYVLDQFGELALVKEQ--ANEGTDTLYVAYTAGFGTTVIDLNN---SNLLNFEN 989
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+T +V G++ N+ +IGN+ NNV +G D+ G +G DTF + A + ++
Sbjct: 990 VTLDPGNTSPFTVTGNALNNTLIGNAGNNVLNGGAGADLLTGGAGADTFVFSAVN---EM 1046
Query: 319 YRFENAIIVYDANEHKQDFL 338
N ++ D + + D +
Sbjct: 1047 GTGANRDVITDFSSLQGDKI 1066
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
G GN+ Y ++ + + + S G D L + G IDLN
Sbjct: 756 GGAGNDTYVLDQFGELALVQEQ--ASEGTDTLYIAYTAGFGTTVIDLNG----------S 803
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ ++ ++ S ++GN+ NN F ++GN+V +G +G+D + Y +
Sbjct: 804 NLQNVENVTLDPANTSPF--SILGNAQNNTLFGNAGNNVLNGGAGIDNLIGGTGNDTYIV 861
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ ++ + ++ D +
Sbjct: 862 DNQYDVVLETSTDPNEIDTIQS 883
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 16/179 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIG-------GVKNYIDLNTESWS-SIGGYEKNMTIAQH 265
T+ G+D + +G + ID + S ++G +N+ +
Sbjct: 317 NGRGGADTMEGGAGNDTYYVDNVGDVVIERGSSLSEIDTVISTISYTLGANVENLILQGG 376
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ G++ N+ + GN+ NN+ +G D+ G G DT+ + I
Sbjct: 377 AENLNATGNALNNTLRGNAGNNLLDGGTGADIMIGGLGNDTYVVDSLLDTV--------I 428
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ LS V A+ ++ A LI G +V M
Sbjct: 429 ETSNLPTEIDTVLSAVNFALGANLENLTLLGTADINGNGNAQNNVLIGNAGNNVLNGMG 487
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 4/116 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGN 283
G+D + IG S + I ++ A +E + + N GN
Sbjct: 591 GAGNDTYYVDNIGDTVVE---TGNSLTEIDTVLSTVSYALGNNVEVLALLGANNLNGTGN 647
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ NN + G+++ +G +G DT + Y + + ++ + ++ D +
Sbjct: 648 ALNNYMVGNIGDNILNGGAGADTLIGGFGNDTYIVDNALDVVVETSNDPNEIDTVR 703
Score = 41.3 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V ++ N+V +G GLDT A + Y + +F +V + D L
Sbjct: 735 VLVGNAANNVLNGMGGLDTMIGGAGNDTYVLDQFGELALVQEQASEGTDTL 785
>gi|66046290|ref|YP_236131.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae B728a]
gi|63256997|gb|AAY38093.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae B728a]
Length = 535
Score = 197 bits (500), Expect = 7e-48, Method: Composition-based stats.
Identities = 103/432 (23%), Positives = 155/432 (35%), Gaps = 82/432 (18%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS-----FDITELNPNAQEVARWALG 60
P + + HL + +K D + S D L A+ AL
Sbjct: 29 PFWLGDSSGTHLT--------YSFHKADSVYATDYSRSQEPGDAYSLTDAQAAAAKSALD 80
Query: 61 EWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRYDSRY---FMEINFDKA 107
WS V D+ F E DI+F + G P R ++ N + A
Sbjct: 81 AWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAA 140
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
D KGT +HE GHALGL H Y +D +E+ ++MSY
Sbjct: 141 D-----PAKGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN 192
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+ SF TPM+ DI A+Q IYGA G+++YK Q +TI+D+G
Sbjct: 193 ------NYSF-KPTTPMLLDIAAMQFIYGANTHYHTGDDVYKWAPGQS---VFETIWDAG 242
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVV 272
G D +D + I+LN +S+IG + IA IE+ +
Sbjct: 243 GKDTIDASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAI 301
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YR 320
GS+ ND +IGN +NV G D G G DT+ L +
Sbjct: 302 GSAFNDTLIGNELDNVLNGRGGLDTMVGGLGNDTYVIDQAGELDLVQEKADQGIDTLKIT 361
Query: 321 FENAIIVYDANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYED 370
++N + L++ E + D+ ++L A +
Sbjct: 362 YDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDK 421
Query: 371 LIQVIGQDVFES 382
L+ G D+
Sbjct: 422 LVGGQGADIMTG 433
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + G D L +T I+LN + ++
Sbjct: 329 GGLGNDTYVIDQAGELDLVQEK--ADQGIDTLKITYDNTSPIAQVINLNAGTLANFENVH 386
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +V+G+ N+ + GN A+NV F +GND G G D + + +
Sbjct: 387 -----LKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFV 441
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ N+ ++ D N + D LS ++ D S A
Sbjct: 442 FNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|254500110|ref|ZP_05112262.1| Matrixin family [Labrenzia alexandrii DFL-11]
gi|222441408|gb|EEE48086.1| Matrixin family [Labrenzia alexandrii DFL-11]
Length = 526
Score = 196 bits (498), Expect = 9e-48, Method: Composition-based stats.
Identities = 112/492 (22%), Positives = 174/492 (35%), Gaps = 58/492 (11%)
Query: 38 HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI-----SSNNGYVCTP 92
+ + A A EW V +++FE T++ + + S T
Sbjct: 40 YFDDTGFRAWTDAEKTAALNAFAEWQAVANISFELTTVREEANILQVLTNSDQYAGQTTA 99
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D I + + I G +HEIGHA+GL HP S G GV +
Sbjct: 100 PADGVNPPTIEYSVLNGQFDYIQPGGDTYLTMVHEIGHAIGLYHPHS---GTTFPGVTLN 156
Query: 153 YENDS-------FLTSVMSYFMPQDSMMDAS--FGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ D+ + +VMSY + + +G + M DI AVQ +YGA G
Sbjct: 157 ADQDTGDNELNQQIWTVMSYAVGWTGQPRTTLDYGTGSGAMTFDIAAVQYLYGARAAETG 216
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW---------SSIG 254
+N Y + + I+D+GG D + I+L + S +
Sbjct: 217 DNTYALPTVNQTGIGWDAIWDTGGTDTISGAGAT-TSLTINLTAATLEGANAGGYVSWVT 275
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E TIA VIE+ +G SG+D + GNSANN +G +G D+ Y
Sbjct: 276 GIEGGFTIANGVVIENAIGGSGDDSITGNSANNA---------INGGAGTDSVIYTGDQS 326
Query: 315 LYKIYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y ++ ++ + +D L++VE L F Q + ++Y
Sbjct: 327 GYLVFTGSQGQTMVVDLTPSRDGKDSLTNVENLTFNGQSVSVSTAAVEPADADGSAY--- 383
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDL-------RNVFGSDRGAA 422
QV E+ HF+ L+E + D Y G+ D VF +
Sbjct: 384 -QVYRFYNTETGSHFFTTSLAERNSVIENLDGLSYEGNAFDSNVTDVNGTAVFRFYNTSN 442
Query: 423 ARHYITHGVKEG----RNPDAF--KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
H+ T E +N F + + Y AS +D A HF
Sbjct: 443 GVHFYTVSADEAASIRQNLSNFQDEGIAYYASADDSNGGTALFRFFNTSNGSHFFTVSET 502
Query: 477 EGRFVTFDSYLY 488
E + Y
Sbjct: 503 ERDNIIATLGHY 514
>gi|298486731|ref|ZP_07004787.1| Ca2+-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298158598|gb|EFH99662.1| Ca2+-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 535
Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats.
Identities = 104/424 (24%), Positives = 156/424 (36%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + +N + + D L AR ALG WS V
Sbjct: 29 PFWLGDSTGTHLTYSFHTAN---SVYATDYSRSQEPSDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+ F E DI+F + + Y Y DVW
Sbjct: 86 ADIKFTEVQDTPDNVGDIRF--GGFKSLQSTEYGQAYAPGTLGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL H Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGNS +NV G D G G DT+ L + ++N V
Sbjct: 310 IGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEGIDTLKITYDNTSPVA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ + ++L A + L+ +G D
Sbjct: 370 TVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLIGNDANNVLFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 68/194 (35%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDTYVIDQAGELALVQEK--ANEGIDTLKITYDNTSPVATVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ +IGN ANNV F +GND G G D + + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLIGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFV 441
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAEMGKGHASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|3493595|gb|AAC33448.1| ZapE [Proteus mirabilis]
Length = 687
Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats.
Identities = 83/289 (28%), Positives = 121/289 (41%), Gaps = 33/289 (11%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
GT LHE+GHALGL H Y + D ++ S SVM Y +P
Sbjct: 274 NNKYQPGTYHYKVILHEVGHALGLNHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTS 328
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQQK---------DSPFIQ 220
D Y T M+ DI+ +Q +YG + NNIY + +
Sbjct: 329 EHADFGGLYPMTFMLLDILLLQYLYGPNMTTRLENNIYGFHSNTGRAAYSLKSIEDKLVS 388
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I+DSGG D LD +L V I+LN +S IGG N++IA T+IE+ +G SG+D +
Sbjct: 389 CIWDSGGIDTLDFSLYT-VNQVINLNEGCFSDIGGLRSNISIAYKTIIENAIGGSGHDTI 447
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IGNSANN GND DG G D + + + + D+L
Sbjct: 448 IGNSANNELLGGDGNDTIDGGLGNDHLYGGMGNDILY-------------GDIGNDYLYG 494
Query: 341 --VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + D ++ + Y D Q+ G D +++ +Y
Sbjct: 495 GIGDDILHGGMGNDILHGSMGNDYLYGNKGND--QLFGGDGDDTLVDYY 541
>gi|71733556|ref|YP_274399.1| metalloprotease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|289627442|ref|ZP_06460396.1| metalloprotease, putative [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|71554109|gb|AAZ33320.1| metalloprotease, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320324669|gb|EFW80743.1| metalloprotease, putative [Pseudomonas syringae pv. glycinea str.
B076]
gi|330866689|gb|EGH01398.1| metalloprotease [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 535
Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats.
Identities = 104/424 (24%), Positives = 155/424 (36%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + +N + + D L AR ALG WS V
Sbjct: 29 PFWLGDSTGTHLTYSFHTAN---SVYATDYSRSQEPSDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+ F E DI+F + + Y Y DVW
Sbjct: 86 ADIKFTEVQDTPDNVGDIRF--GGFKSLQSTEYGQAYAPGTLGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL H Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGNS +NV G D G G DT+ L + ++N V
Sbjct: 310 IGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEGIDTLKITYDNTSPVA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ ++L A + L+ +G D
Sbjct: 370 TVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDTYVIDQAGELALVQEK--ANEGIDTLKITYDNTSPVATVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFV 441
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAEMGKGHASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|257485207|ref|ZP_05639248.1| metalloprotease, putative [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|330987388|gb|EGH85491.1| metalloprotease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010894|gb|EGH90950.1| metalloprotease [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 535
Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats.
Identities = 104/424 (24%), Positives = 156/424 (36%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + +N + + D L AR ALG WS V
Sbjct: 29 PFWLGDSTGTHLTYSFHTAN---SVYATDYSRSQEPSDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+ F E DI+F + + Y Y DVW
Sbjct: 86 ADIKFTEVQDTPDNVGDIRF--GGFKSLQSTEYGQAYAPGTLGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL H Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGNS +NV G D G G DT+ L + ++N V
Sbjct: 310 IGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEGIDTLKITYDNTSPVA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + L++ E + D+ ++L A + L+ +G D
Sbjct: 370 TVIDLNAEPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 68/194 (35%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN E ++
Sbjct: 329 GGLGNDTYVIDQAGELALVQEK--ANEGIDTLKITYDNTSPVATVIDLNAEPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFV 441
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAEMGKGHASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|320328779|gb|EFW84778.1| metalloprotease, putative [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330881974|gb|EGH16123.1| metalloprotease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 535
Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats.
Identities = 104/424 (24%), Positives = 155/424 (36%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + +N + + D L AR ALG WS V
Sbjct: 29 PFWLGDSTGTHLTYSFHTAN---SVYATDYSRSQEPSDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+ F E DI+F + + Y Y DVW
Sbjct: 86 ADIKFTEVQDTPDNVGDIRF--GGFKSLQSTEYGQAYAPGTLGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL H Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGNS +NV G D G G DT+ L + ++N V
Sbjct: 310 IGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEGIDTLKITYDNTSPVA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ ++L A + L+ +G D
Sbjct: 370 TVIDLDAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDL+ ++
Sbjct: 329 GGLGNDTYVIDQAGELALVQEK--ANEGIDTLKITYDNTSPVATVIDLDAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFV 441
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ D N D LS ++ D S A
Sbjct: 442 FNDLAEMGKGHASDVITDFNSQHGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|150377392|ref|YP_001313987.1| peptidase domain-containing protein [Sinorhizobium medicae WSM419]
gi|150031939|gb|ABR64054.1| peptidase domain protein [Sinorhizobium medicae WSM419]
Length = 1112
Score = 195 bits (496), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/373 (23%), Positives = 144/373 (38%), Gaps = 51/373 (13%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY---- 88
+ L ++ ELN P + A AL W+ V L FE D F SS +
Sbjct: 46 MAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEVVD---DTPFDSSTDWMEVVS 102
Query: 89 ------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
Y S ++ I D G + + +HE GH GL HPG YN
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNY 162
Query: 143 GYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--- 194
P Y + + D SVMSYF D + + S +TP+++DI AV +
Sbjct: 163 SGPGGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSASTPLMADIEAVIRRFFS 221
Query: 195 ---------YGAPKGSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLI 236
Y + + G+N+Y Q I+D+GG D +D +
Sbjct: 222 TVDENGVRTYQHIELNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGADTIDFSG- 280
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIGNSANNVF 289
+DL +SS+ G+ N++I I++ +GS +D++IGN N
Sbjct: 281 STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADETDYYIDNGIGSRFDDILIGNDGANTL 340
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQDFLSDVERLRFAD 348
G D G+ G DT+F + + + N ++ + K +++VE + +AD
Sbjct: 341 DGRGGGDRMAGNGGDDTYFVDSIDDIVREEANGGNDTVILLSRHLKIRKIANVENIIYAD 400
Query: 349 QCIDSVNVKQRSI 361
+ +
Sbjct: 401 ETTTQPGGGAETP 413
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 59/190 (31%), Gaps = 12/190 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ +Y Y GG D + IDL + G
Sbjct: 606 GNDGDILYGEAGNDTIIGGAGQDYLDGGSGVDTVVYAG-SPDGVTIDLAEGTACGGDGDG 664
Query: 258 KNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + VI E+ VGSS +D +IGN+ N +G+D G G D
Sbjct: 665 PVQIVGRGAVIRHDILAGFENAVGSSFDDHLIGNALANELSGGAGDDRLTGGGGADRLNG 724
Query: 310 YAPSYLYKIYRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A S + + + + D +E L + ++L
Sbjct: 725 GAGSDTADYADATSGVRLSLAGRKSGGDTYVSIENLAGSGFNDRLTGDGAANVLTGQGGN 784
Query: 369 EDLIQVIGQD 378
+ + G D
Sbjct: 785 DTIDGGRGDD 794
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 25/181 (13%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNT 247
IY + + D+ I+ G+D+LD G + I DL
Sbjct: 397 IYADETTTQPGGGAETPPSAGDNTMTSIIFGGSGNDILDG---GAGDDTIFGQGGDDLII 453
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+ + N TI + + GND + G N+ GND+ DG +G DT
Sbjct: 454 GGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDTL 513
Query: 308 FYYAPSYLYKIYRFENAII----------------VYDANEHKQDFLSDVERLRFADQCI 351
+++ + + V D +E L +D I
Sbjct: 514 SGQDGIDIFRGGEGTDTVDFSKESPFQLLVNLATNVASGGTASGDTFYSIENLIGSDDRI 573
Query: 352 D 352
D
Sbjct: 574 D 574
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG D L+ +Y D + S+ G + IE++ GS ND + G+
Sbjct: 716 GGGADRLNGGAGSDTADYADATSGVRLSLAGRKSGGDTY--VSIENLAGSGFNDRLTGDG 773
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAP 312
A NV GND DG G DT
Sbjct: 774 AANVLTGQGGNDTIDGGRGDDTLLGDFA 801
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 12/172 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ GD + + G + ID + T + + G +++ G + D++ G
Sbjct: 555 ASGDTFYSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDTLDGGNDGDILYG 614
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------- 335
+ N+ +G D DG SG+DT Y I E D + Q
Sbjct: 615 EAGNDTIIGGAGQDYLDGGSGVDTVVYAGSPDGVTIDLAEGTACGGDGDGPVQIVGRGAV 674
Query: 336 ---DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L+ E + + + L A + L G D
Sbjct: 675 IRHDILAGFENAVGSSFDDHLIGNALANELSGGAGDDRLTGGGGADRLNGGA 726
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 30/182 (16%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYD------SGGDDL-------LDLTLIGGVKNYIDLN 246
G+ G++ Y F+ +I D +GG+D L + I V+N I +
Sbjct: 351 GNGGDDTY----------FVDSIDDIVREEANGGNDTVILLSRHLKIRKIANVENIIYAD 400
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ GG E + +T+ + G SGND++ G + ++ F G+D+ G G D+
Sbjct: 401 ETTTQPGGGAETPPSAGDNTMTSIIFGGSGNDILDGGAGDDTIFGQGGDDLIIG--GRDS 458
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + E+ D N+ D + + D + +
Sbjct: 459 LASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDTLSGQDG 518
Query: 362 LE 363
++
Sbjct: 519 ID 520
Score = 43.6 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G SG+D +IG +++ G D G +G DTF + + ++ D
Sbjct: 977 GVSGSDTLIGGRGSDLLDGGLGADTLIGGAGEDTFRFSTALGNGNVDGIREFDVIDDT 1034
>gi|288958308|ref|YP_003448649.1| hypothetical protein AZL_014670 [Azospirillum sp. B510]
gi|288910616|dbj|BAI72105.1| hypothetical protein AZL_014670 [Azospirillum sp. B510]
Length = 394
Score = 195 bits (496), Expect = 2e-47, Method: Composition-based stats.
Identities = 90/283 (31%), Positives = 143/283 (50%), Gaps = 9/283 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N + S+I + + +++ G SGND + G +++ +GN+ DG SG D
Sbjct: 99 NDTARSTI--LSGSDIMYGSDFNDTIRGYSGNDTIFGGGGSDLLDGGAGNNYIDGGSGDD 156
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T ++ + + + ++ VYD+N D L+ VE +RF D+ + + V + Y
Sbjct: 157 TVQRHSTAASSTTFSYGGSVYVYDSN--GYDQLTGVEYIRFTDRTVATSGVSAFDPMSYL 214
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A+ DL G + ++ H+ G+ E R +TFD+ YL + DL FG++ AA +H
Sbjct: 215 AANSDLAAAFGANRTAALNHYLNSGIRERRSVTFDAASYLAANQDLAAAFGANTEAATQH 274
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
YIT+G E RN F A+ YIA++ DLI AF + H++ G E R V F++
Sbjct: 275 YITNGRLENRN-TTFNAMSYIAANPDLIQAFGTNTTAAAL---HYATVGRLENRSVNFNA 330
Query: 486 YLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRNPDAFKAL 527
YL Y DLR+ GS + AA HYI G +EGR+ +
Sbjct: 331 TAYLARYSDLRSALGSQNEAAATTHYILSGFREGRSGAPLTST 373
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 68/171 (39%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
AF + Y+A++ DL AF +H+ N G E R VTFD+ YL + DL
Sbjct: 206 SAFDPMSYLAANSDLAAAFGAN---RTAALNHYLNSGIRERRSVTFDAASYLAANQDLAA 262
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
FG++ AA +HYIT+G E RN F A+ YIA++ DLI AF A H++
Sbjct: 263 AFGANTEAATQHYITNGRLENRNT-TFNAMSYIAANPDLIQAFGTN---TTAAALHYATV 318
Query: 558 GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGRALGI 607
G E RS+ FN YL Y DL + GS AAA HYI G +EGR+
Sbjct: 319 GRLENRSVNFNATAYLARYSDLRSALGSQNEAAATTHYILSGFREGRSGAP 369
Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
FD YL + DL FG++R AA HY+ G++E R+ F A Y+A+++DL A
Sbjct: 205 VSAFDPMSYLAANSDLAAAFGANRTAALNHYLNSGIRERRSV-TFDAASYLAANQDLAAA 263
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
F + A H+ G E R+ TFN Y+ + DL FG++ +AAA HY T G
Sbjct: 264 FGANTE---AATQHYITNGRLENRNTTFNAMSYIAANPDLIQAFGTNTTAAALHYATVGR 320
Query: 600 KEGRALGISGMQFKSVMN 617
E R++ + + + +
Sbjct: 321 LENRSVNFNATAYLARYS 338
>gi|317447648|emb|CBJ55055.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 276
Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 92/243 (37%), Gaps = 28/243 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 12 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 71
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 72 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 131
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 191
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIEVQQ 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 192 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNT 251
Query: 214 KDS 216
Sbjct: 252 GRD 254
>gi|317447663|emb|CBJ55063.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 265
Score = 195 bits (495), Expect = 3e-47, Method: Composition-based stats.
Identities = 63/247 (25%), Positives = 94/247 (38%), Gaps = 26/247 (10%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 13 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 72
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 73 LQKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGES 132
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 192
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK 214
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 193 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTAD 252
Query: 215 DSPFIQT 221
+ T
Sbjct: 253 RDYYSAT 259
>gi|238623370|emb|CAS06679.1| alkaline metalloprotease [Pseudomonas sp. W15a]
Length = 263
Score = 195 bits (495), Expect = 3e-47, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 92/247 (37%), Gaps = 35/247 (14%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H ++ ++ N
Sbjct: 12 VNGKPSFSVDQAADHLLRENAAYRDLDGNGKIDLTYTFLTSASSATMNKHGIT-GFSQFN 70
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 71 TQQKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYHQ 130
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ + HEIGH LGL HPG YN G D D
Sbjct: 131 SGLDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 190
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 191 YGQDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTY 250
Query: 208 KIEVQQK 214
Sbjct: 251 GFNSNTG 257
>gi|330897915|gb|EGH29334.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 535
Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats.
Identities = 102/435 (23%), Positives = 155/435 (35%), Gaps = 81/435 (18%)
Query: 10 TERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQEVARW 57
T+ LL +W S + Y + + D L A+
Sbjct: 18 TDDRVTSLLWGPFWLGDSSGTHLTYSFHRADSVYATDYSRSQEPGDAYSLTDAQAAAAKS 77
Query: 58 ALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRYDSRY---FMEINF 104
AL WS V D+ F E DI+F + G P R ++ N
Sbjct: 78 ALDAWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNV 137
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+ AD KGT +HE GHALGL H Y +D +E+ ++MS
Sbjct: 138 NAAD-----PAKGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMS 189
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIY 223
Y + SF TPM+ D+ A+Q IYGA G+++YK Q +TI+
Sbjct: 190 YTN------NYSF-KPTTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFETIW 239
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIE 269
D+GG D +D + I+LN +S+IG + IA IE
Sbjct: 240 DAGGKDTIDASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIE 298
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----------- 318
+ +GS+ ND +IGN +NV G D G G DT+ L +
Sbjct: 299 NAIGSAFNDTLIGNELDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTL 358
Query: 319 -YRFENAIIVYDANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTAS 367
++N + L++ E + D+ ++L A
Sbjct: 359 KITYDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAG 418
Query: 368 YEDLIQVIGQDVFES 382
+ L+ G D+
Sbjct: 419 NDKLVGGQGADIMTG 433
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 67/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + G D L +T I+LN + ++
Sbjct: 329 GGLGNDTYVIDQAGELDLVQEK--ADQGVDTLKITYDNTSPIAQVINLNAGTLANFENVH 386
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +V+G+ N+ + GN A+NV F +GND G G D + + +
Sbjct: 387 -----LKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFV 441
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ N+ ++ D N + D LS ++ D S A
Sbjct: 442 FNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ + H
Sbjct: 502 ADHVLSGNVNADLH 515
>gi|110598386|ref|ZP_01386659.1| VCBS [Chlorobium ferrooxidans DSM 13031]
gi|110339995|gb|EAT58497.1| VCBS [Chlorobium ferrooxidans DSM 13031]
Length = 1656
Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats.
Identities = 88/368 (23%), Positives = 139/368 (37%), Gaps = 60/368 (16%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKV------------------VDLTFEETS 74
D T + +++ AR + + ++T +S
Sbjct: 1031 DGYTPSEGGTSLVQMSALQVATARLSFQLLDDIMAKSSGADHRLVQIADPSANITLNYSS 1090
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG--KGTILSHNALHEIGHAL 132
+ S + S +I A IG G+ +HEIGHAL
Sbjct: 1091 NTGGGTYTISFGTVDTVTQSFSITAEQIWLSSAWSSNSDIGMSLGSYGLFTMIHEIGHAL 1150
Query: 133 GLMHPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD-------ASFGYCAT 182
GL HPG Y NGG Y + + D+ +VMSYF +SF + T
Sbjct: 1151 GLSHPGVYDAGNGGTITYQNNAAFAEDNRKYTVMSYFGGYLPGYGWYPDGTYSSFIFPQT 1210
Query: 183 PMVSDIVAVQKIYGAPKGS-LGNNIYKIE-------------VQQKDSPFIQTIYDSGGD 228
PM+ DI A+Q ++GA + G+ IY ++ I TI+D+GG
Sbjct: 1211 PMLYDIAAIQALHGADTVTRTGDTIYGFNCNLASTDAERPIYDFTSNATPIFTIWDAGGM 1270
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D +D + + I+LN ++SS+GG +N+ IA IE VG SGNDV+IG++A N
Sbjct: 1271 DTIDCSGYT-TQQIINLNPGTYSSLGGMTENVAIAFDCTIERAVGGSGNDVLIGSAALNY 1329
Query: 289 FFESSGNDVF---------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ D + G++G D + + + F +
Sbjct: 1330 LNGGNAGDFYIVNRAGDHLAAEFADTGTTGSDEVRFASTIEHDTLTLFAGDTGIERVVIG 1389
Query: 334 KQDFLSDV 341
+S V
Sbjct: 1390 TGVGISGV 1397
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 61/173 (35%), Gaps = 14/173 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A G+ G++ + + D+G + ++ T +G S +
Sbjct: 1353 ADTGTTGSDEVRFASTIEHDTLTLFAGDTGIERVVIGTGVG------------ISGVTTG 1400
Query: 257 EKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
++ + V+ + G++G + + G + N+V + G D+ +G +G D + ++
Sbjct: 1401 TTSLDVDASAVLNPIVITGNAGANKLTGTTYNDVLYGGKGTDLLNGGNGSDIYHIFSADE 1460
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ D +D L D I+ V + L AS
Sbjct: 1461 HLSAEFSDTGTTGSDDVRFGSTIANDTLTLYAGDTGIERVTATGTATLNIDAS 1513
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 76/235 (32%), Gaps = 27/235 (11%)
Query: 194 IYGAPKGSL-----GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+YG L G++IY I + + + G D +
Sbjct: 1435 LYGGKGTDLLNGGNGSDIYHIFSADEHLSAEFSDTGTTGSDDVRFGSTIANDTL-----T 1489
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E+ T+ G ++ GN+ +N ++ D F G SG D+F
Sbjct: 1490 LYAGDTGIERVTATGTATLNIDASGVLNGLLLTGNAGSNTLTGTAYCDTFTGGSGADSFV 1549
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ Y++ N + DF S + L F+ + +L +
Sbjct: 1550 F-----TYQLQPVVNKDTI-------IDFQSGSDVLAFSKGSFTGITSSAGGLLSSAEFW 1597
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ +G D + + + G ++ +D + L + G+ A
Sbjct: 1598 SEAGATVGHDSDDRIIYDTATG-----NLYYDDDGNGSANARLVALIGTTAHPAL 1647
>gi|330939111|gb|EGH42542.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330980802|gb|EGH78905.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 535
Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats.
Identities = 102/435 (23%), Positives = 155/435 (35%), Gaps = 81/435 (18%)
Query: 10 TERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQEVARW 57
T+ LL +W S + Y + + D L A+
Sbjct: 18 TDDRVTSLLWGPFWLGDSSGTHLTYSFHRADSVYATDYSRSQEPGDAYSLTDAQAAAAKS 77
Query: 58 ALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRYDSRY---FMEINF 104
AL WS V D+ F E DI+F + G P R ++ N
Sbjct: 78 ALDAWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNV 137
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+ AD KGT +HE GHALGL H Y +D +E+ ++MS
Sbjct: 138 NAAD-----PAKGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMS 189
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIY 223
Y + SF TPM+ D+ A+Q IYGA G+++YK Q +TI+
Sbjct: 190 YTN------NYSF-KPTTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFETIW 239
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIE 269
D+GG D +D + I+LN +S+IG + IA IE
Sbjct: 240 DAGGKDTIDASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIE 298
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----------- 318
+ +GS+ ND +IGN +NV G D G G DT+ L +
Sbjct: 299 NAIGSAFNDTLIGNDLDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTL 358
Query: 319 -YRFENAIIVYDANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTAS 367
++N + L++ E + D+ ++L A
Sbjct: 359 KITYDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAG 418
Query: 368 YEDLIQVIGQDVFES 382
+ L+ G D+
Sbjct: 419 NDKLVGGQGADIMTG 433
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 67/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + G D L +T I+LN + ++
Sbjct: 329 GGLGNDTYVIDQAGELDLVQEK--ADQGVDTLKITYDNTSPIAQVINLNAGTLANFENVH 386
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +V+G+ N+ + GN A+NV F +GND G G D + + +
Sbjct: 387 -----LKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFV 441
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ N+ ++ D N + D LS ++ D S A
Sbjct: 442 FNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ + H
Sbjct: 502 ADHVLSGNVNADLH 515
>gi|289648029|ref|ZP_06479372.1| metalloprotease, putative [Pseudomonas syringae pv. aesculi str.
2250]
Length = 535
Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats.
Identities = 103/424 (24%), Positives = 155/424 (36%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + +N + + D L AR ALG WS V
Sbjct: 29 PFWLGDSTGTHLTYSFHTAN---SVYATDYSRSQEPSDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+ F E DI+F + + Y Y DVW
Sbjct: 86 ADIKFTEVQDTPDNVGDIRF--GGFKSLQSTEYGQAYAPGTLGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL H Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGNS +NV G D G G D++ L + ++N V
Sbjct: 310 IGNSLDNVLDGRGGLDTMIGGLGNDSYVIDQAGELALVQEKANEGIDTLKITYDNTSPVA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ ++L A + L+ +G D
Sbjct: 370 TVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDSYVIDQAGELALVQEK--ANEGIDTLKITYDNTSPVATVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + +++G+ N+ + GN ANNV F +GND G G D + + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGLGADIMTGGSGADRFV 441
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ D N + D LS ++ D S A
Sbjct: 442 FNDLAEMGKGHASDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|110632973|ref|YP_673181.1| peptidase, metallopeptidases [Mesorhizobium sp. BNC1]
gi|110283957|gb|ABG62016.1| peptidase, metallopeptidase [Chelativorans sp. BNC1]
Length = 745
Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats.
Identities = 89/444 (20%), Positives = 142/444 (31%), Gaps = 86/444 (19%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHR--------LSFDITELNPNAQEVARWALG 60
T D LL W+ + Y ++ + LN Q R A
Sbjct: 10 TGNAYIDGLLSGIKWAPTNLTYSFPTSASYYGSGYGSGEPGSNFGALNSAQQAAGRAAFD 69
Query: 61 EWSKVVDLTFEETS----IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG- 115
+S V ++TF E + H+D++ +S+ Y+ + DVW
Sbjct: 70 IFSSVANITFSEIAETSNQHADLRLAASD-----MVGTAWAYYPSTRSEGGDVWFNKSNG 124
Query: 116 ------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-- 167
G LHEIGHALGL H G DS +VMSY
Sbjct: 125 YYTSPQAGNYAFTTFLHEIGHALGLEHAHE--------GHVMPAGRDSMEYTVMSYRSYV 176
Query: 168 ---PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK--------- 214
++ +G+ + M+ DI A+Q +YGA + G Y
Sbjct: 177 GASTTSGYVNEKWGFAQSLMMYDIAALQHMYGANYSTNSGATTYSWSPTTGQMFINGTGQ 236
Query: 215 ----DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG-------------YE 257
+ T++D GG D + + +DL +W++
Sbjct: 237 DMPGANRIFLTVWDGGGADTYNFSAYS-TSLKVDLRPGAWTTTSSDQLARLHYDGSKLAA 295
Query: 258 KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N+ A ++IE+ G S +D + GN+A N + GND +G G D A
Sbjct: 296 GNIANALLHGNDPRSLIENAKGGSASDRITGNTAVNKLCGNGGNDTLNGMEGNDVLIGGA 355
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ---------------DFLSDVERLRFADQCIDSVNV 356
+ + DA D + +E L +
Sbjct: 356 GADKLNGGSGFDYASYTDATAGVVARLYAPTTNKGYAAGDTYTSIEGLIGSAHSDQLSGD 415
Query: 357 KQRSILEYTASYEDLIQVIGQDVF 380
+ + L A + L + G D
Sbjct: 416 EAGNKLHGGAGNDVLYGLGGNDAL 439
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 64/203 (31%), Gaps = 11/203 (5%)
Query: 193 KIYGAPKGS-----LGNNI-YKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
K+YG + GN++ Y + + S G D LD +Y D
Sbjct: 508 KLYGDAARNKLFGGAGNDVLYGLGGNDALYGMDGTDKLVGSAGADKLDGGAGFDYASYQD 567
Query: 245 LNTESWSSIGGYEKNMTIAQH---TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + N A T IE ++GS D + G++A N + +GNDV G
Sbjct: 568 ATAGVVARLDRPSSNTGYAAGDTYTGIEGLMGSKYTDKLYGDAAANRLYGEAGNDVLYGL 627
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D A + + ++ + + ID ++ +
Sbjct: 628 GGNDVLIGGAGADRLYGGAGADRFVIDKIGNSLPTARDRIGDFTRGEDKIDLRSIDANTS 687
Query: 362 LEYTASYEDLIQVIGQDVFESMK 384
L ++ + +
Sbjct: 688 LGGDQAFSFIGGKAFSGKASELN 710
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 69/211 (32%), Gaps = 30/211 (14%)
Query: 200 GSLGNNI-YKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN++ Y + ++ S G D LD +Y D S +
Sbjct: 423 GGAGNDVLYGLGGNDALYGVDGNDKLFGSAGADKLDGGAGFDYASYQDATAGVVSRLDAP 482
Query: 257 EKNMTIAQHTV---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY---- 309
+ N A IE ++GS +D + G++A N F +GNDV G G D +
Sbjct: 483 KANSGHAAGDTYSSIEGLIGSKYSDKLYGDAARNKLFGGAGNDVLYGLGGNDALYGMDGT 542
Query: 310 -------------YAPSYLYKIYRFENAIIV-------YDANEHKQDFLSDVERLRFADQ 349
+ Y Y+ A +V + D + +E L +
Sbjct: 543 DKLVGSAGADKLDGGAGFDYASYQDATAGVVARLDRPSSNTGYAAGDTYTGIEGLMGSKY 602
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ L A + L + G DV
Sbjct: 603 TDKLYGDAAANRLYGEAGNDVLYGLGGNDVL 633
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 60/200 (30%), Gaps = 27/200 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-- 265
+ G D L+ +Y D + + N A
Sbjct: 337 GGNDTLNGMEGNDVLIGGAGADKLNGGSGFDYASYTDATAGVVARLYAPTTNKGYAAGDT 396
Query: 266 -TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY--------------- 309
T IE ++GS+ +D + G+ A N +GNDV G G D +
Sbjct: 397 YTSIEGLIGSAHSDQLSGDEAGNKLHGGAGNDVLYGLGGNDALYGVDGNDKLFGSAGADK 456
Query: 310 --YAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ Y Y+ A +V ++ D S +E L + R+
Sbjct: 457 LDGGAGFDYASYQDATAGVVSRLDAPKANSGHAAGDTYSSIEGLIGSKYSDKLYGDAARN 516
Query: 361 ILEYTASYEDLIQVIGQDVF 380
L A + L + G D
Sbjct: 517 KLFGGAGNDVLYGLGGNDAL 536
>gi|16264732|ref|NP_437524.1| putative outer membrane secretion protein [Sinorhizobium meliloti
1021]
gi|15140870|emb|CAC49384.1| putative hemolysin-adenlyate cyclase protein [Sinorhizobium
meliloti 1021]
Length = 1112
Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats.
Identities = 92/373 (24%), Positives = 145/373 (38%), Gaps = 51/373 (13%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY---- 88
+ L ++ ELN P + A AL W+ V L FE D F S+ +
Sbjct: 46 MAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVD---DTPFDSTTDWMEVVS 102
Query: 89 ------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
Y S ++ I D G + + +HE GH GL HPG YN
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNY 162
Query: 143 GYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--- 194
P Y + + D SVMSYF D + + S +TP+++DI AV +
Sbjct: 163 SGPGGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSASTPLMADIEAVIRRFFS 221
Query: 195 ---------YGAPKGSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLI 236
Y + G+N+Y Q I+D+GG D +D +
Sbjct: 222 TVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSG- 280
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIGNSANNVF 289
+DL +SS+ G+ N++I A IE+ +GS +D++IGN N
Sbjct: 281 STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTL 340
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQDFLSDVERLRFAD 348
SG D G+ G DT+F + + + N ++ + K +++VE + +AD
Sbjct: 341 DGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYAD 400
Query: 349 QCIDSVNVKQRSI 361
+ S
Sbjct: 401 ESTTQPGGGGASP 413
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 55/164 (33%), Gaps = 25/164 (15%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTESWSSIGGYEKNMTIA- 263
D+ I+ G+D LD G + I DL S+ + N TI
Sbjct: 414 PSAGDNTMTSIIFGGNGNDTLDG---GAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDV 470
Query: 264 --------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+++ G GND ++G N++ +G+DV G G+D F A
Sbjct: 471 EDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDT 530
Query: 316 YKIYRFEN-------AIIVYDANEHKQDFLSDVERLRFADQCID 352
+ A V D +E L +D ID
Sbjct: 531 VDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRID 574
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 12/190 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ +Y + G D + IDL + S G
Sbjct: 606 GNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAG-SPDGVTIDLANGTASGGDGDG 664
Query: 258 KNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + VI E+ GSS +D +IGN+ N +G+D G G D
Sbjct: 665 PVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNG 724
Query: 310 YAPSYLYKIYRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A S + + + D +E L + ++L
Sbjct: 725 GAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGN 784
Query: 369 EDLIQVIGQD 378
+ + G D
Sbjct: 785 DTIDGGRGDD 794
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L+ +Y D + S GG T IE++ GS D + GN A N
Sbjct: 720 DRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTY---VSIENLAGSGFGDRLTGNGAAN 776
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAP 312
V GND DG G DT
Sbjct: 777 VLTGQGGNDTIDGGRGDDTLLGDFA 801
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 43/144 (29%), Gaps = 34/144 (23%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT------IAQHTVIESVVGSSGN- 277
G D +D + + ++L + +S G + I I+ +G+S
Sbjct: 525 GAGVDTVDFSKESPFQLLVNL-ATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAAN 583
Query: 278 --------------------------DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
D++ G + N+ +G D DG SG+DT Y
Sbjct: 584 HFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAG 643
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
I D + Q
Sbjct: 644 SPDGVTIDLANGTASGGDGDGPVQ 667
>gi|197284188|ref|YP_002150060.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681675|emb|CAR40757.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 687
Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats.
Identities = 82/289 (28%), Positives = 122/289 (42%), Gaps = 33/289 (11%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
GT LHE+GHALGL H Y + D ++ S SVM Y +P
Sbjct: 274 NNKYQPGTYHYKVVLHEVGHALGLSHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTS 328
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQQK---------DSPFIQ 220
D Y T M+ DI+ +Q++YG + NNIY + +
Sbjct: 329 EHADFGGLYPMTFMLLDILLLQQLYGENMTTRLENNIYGFHSNTGRVAYSLKSIEDKLVS 388
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I+DSGG D LD +L V I+LN S+S IGG N++IA T+IE+ +G SG+D +
Sbjct: 389 CIWDSGGIDTLDFSLYT-VNQVINLNEGSFSDIGGLRSNISIAYKTIIENAIGGSGHDTI 447
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IGNSANN GND G G D + + + + D+L
Sbjct: 448 IGNSANNELIGGDGNDTIKGGLGNDHLYGGMGNDILY-------------GDIGNDYLYG 494
Query: 341 --VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + D ++ + Y D ++ G D +++ +Y
Sbjct: 495 GIGDDILHGGMGNDILHGSMGNDYLYGNKGND--KLFGGDGDDTLVDYY 541
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 20/159 (12%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
G+D L D L GG+ N I + + G + N + +++V GN+ I
Sbjct: 488 GNDYLYGGIGDDILHGGMGNDILHGSMGNDYLYGNKGNDKLFGGDGDDTLVDYYGNNTFI 547
Query: 282 GNSAN-----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G N N GND+F G + + + + ++ A +
Sbjct: 548 GGKGNDLLFSISKAGRNELQGGEGNDIFYCGLGTNLLYGEQGNDTFNFLCYKGA----KS 603
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
DF ++ +++ F DQ +++ + +E + E
Sbjct: 604 YNLIFDFNTNEDKIIFVDQNYKKIDISKMKRVEQLSGNE 642
>gi|307315398|ref|ZP_07594966.1| Peptidase M10 serralysin [Sinorhizobium meliloti BL225C]
gi|306898818|gb|EFN29473.1| Peptidase M10 serralysin [Sinorhizobium meliloti BL225C]
Length = 1112
Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats.
Identities = 92/373 (24%), Positives = 145/373 (38%), Gaps = 51/373 (13%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY---- 88
+ L ++ ELN P + A AL W+ V L FE D F S+ +
Sbjct: 46 MAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVD---DTPFDSTTDWMEVVS 102
Query: 89 ------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
Y S ++ I D G + + +HE GH GL HPG YN
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNY 162
Query: 143 GYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--- 194
P Y + + D SVMSYF D + + S +TP+++DI AV +
Sbjct: 163 SGPGGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSASTPLMADIEAVIRRFFS 221
Query: 195 ---------YGAPKGSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLI 236
Y + G+N+Y Q I+D+GG D +D +
Sbjct: 222 TVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSG- 280
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIGNSANNVF 289
+DL +SS+ G+ N++I A IE+ +GS +D++IGN N
Sbjct: 281 STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTL 340
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQDFLSDVERLRFAD 348
SG D G+ G DT+F + + + N ++ + K +++VE + +AD
Sbjct: 341 DGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYAD 400
Query: 349 QCIDSVNVKQRSI 361
+ S
Sbjct: 401 ESTTQPGGGGASP 413
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 59/195 (30%), Gaps = 25/195 (12%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y + P+ D I+G + TI+
Sbjct: 398 YADESTTQPGGGGASP--PIAGDNTMTSIIFGGNGNDTLD----------GGAGDDTIFG 445
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GGDDL+ I+ NT + ++ +++ G GND ++G
Sbjct: 446 KGGDDLIIGGRDSLASRDIN-NTIDVEDLEDQTES-----DDGNDTLYGGGGNDTILGGQ 499
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-------AIIVYDANEHKQDF 337
N++ +G+DV G G D F A + A V D
Sbjct: 500 GNDILDGGAGDDVLSGQDGADIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDT 559
Query: 338 LSDVERLRFADQCID 352
+E L +D ID
Sbjct: 560 FHSIENLIGSDDRID 574
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 12/190 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ +Y + G D + IDL + S G
Sbjct: 606 GNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAG-SPDGVTIDLANGTASGGDGDG 664
Query: 258 KNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + VI E+ GSS +D +IGN+ N +G+D G G D
Sbjct: 665 PVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNG 724
Query: 310 YAPSYLYKIYRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A S + + + D +E L + ++L
Sbjct: 725 GAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGN 784
Query: 369 EDLIQVIGQD 378
+ + G D
Sbjct: 785 DTIDGGRGDD 794
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L+ +Y D + S GG T IE++ GS D + GN A N
Sbjct: 720 DRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTY---VSIENLAGSGFGDRLTGNGAAN 776
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAP 312
V GND DG G DT
Sbjct: 777 VLTGQGGNDTIDGGRGDDTLLGDFA 801
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 43/144 (29%), Gaps = 34/144 (23%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT------IAQHTVIESVVGSSGN- 277
G D +D + + ++L + +S G + I I+ +G+S
Sbjct: 525 GAGVDTVDFSKESPFQLLVNL-ATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAAN 583
Query: 278 --------------------------DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
D++ G + N+ +G D DG SG+DT Y
Sbjct: 584 HFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAG 643
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
I D + Q
Sbjct: 644 SPDGVTIDLANGTASGGDGDGPVQ 667
>gi|302185690|ref|ZP_07262363.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae 642]
Length = 535
Score = 193 bits (491), Expect = 7e-47, Method: Composition-based stats.
Identities = 98/430 (22%), Positives = 149/430 (34%), Gaps = 71/430 (16%)
Query: 10 TERIADHLLRDQYWSN-------YFIRYKPDVLTTHRLS-----FDITELNPNAQEVARW 57
T+ LL +W + ++ D + S D L A+
Sbjct: 18 TDDRVTSLLWGPFWLGDSSGTHLTYSFHRSDSVYATDYSRSQEPGDAYSLTDAQAAAAKS 77
Query: 58 ALGEWSKVVDLTFEETSIHSD--IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY--- 112
AL WS V D+ F E +D + + Y DVW
Sbjct: 78 ALDAWSAVADIKFTEVQDTADNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPKV 137
Query: 113 ---GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ 169
KGT +HE GHALGL H Y +D +E+ ++MSY
Sbjct: 138 NAADPAKGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMSYTN-- 192
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
+ SF TPM+ D+ A+Q IYGA G+++YK Q +TI+D+GG
Sbjct: 193 ----NYSF-KPTTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFETIWDAGGK 244
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGS 274
D +D + I+LN +S+IG + IA IE+ +GS
Sbjct: 245 DTIDASNQ-LASVKINLNEGEFSTIGKAFLDYNANPDAPTLMNSGLAIAYGAHIENAIGS 303
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFE 322
+ ND +IGN +NV G D G G DT+ L + ++
Sbjct: 304 AFNDTLIGNDLDNVLNGRGGVDTMIGGLGNDTYVIDQAGELDLVQEKADQGTDTLKITYD 363
Query: 323 NAIIVYDANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLI 372
N + L + E + D+ ++L A + L+
Sbjct: 364 NTSPIAQVINLNAGTLVNFENVHLKGEGAFTLLGNDRNNTLTGNDADNVLFGGAGNDKLV 423
Query: 373 QVIGQDVFES 382
G D+
Sbjct: 424 GGQGADIMTG 433
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + G D L +T I+LN + +
Sbjct: 329 GGLGNDTYVIDQAGELDLVQEK--ADQGTDTLKITYDNTSPIAQVINLNAGTLVNFENVH 386
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +++G+ N+ + GN A+NV F +GND G G D + + +
Sbjct: 387 -----LKGEGAFTLLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFV 441
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N+ ++ D N + D LS ++ D S A
Sbjct: 442 FNDLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|238623350|emb|CAS06669.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 254
Score = 193 bits (491), Expect = 7e-47, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 92/242 (38%), Gaps = 26/242 (10%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 10 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 69
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 70 LQKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGES 129
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 130 WYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 189
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK 214
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 190 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTAD 249
Query: 215 DS 216
Sbjct: 250 RD 251
>gi|330965844|gb|EGH66104.1| metalloprotease [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 535
Score = 193 bits (490), Expect = 9e-47, Method: Composition-based stats.
Identities = 101/424 (23%), Positives = 155/424 (36%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L AR ALG WS V
Sbjct: 29 PFWLGDATGTHLTYSFHTAD---SVYATDYSRSQEPGDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+TF E DI+F + + Y Y DVW
Sbjct: 86 ADITFTEVKDTPDNVGDIRF--GGFQGLQSLEYGQAYAPGTLGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL H Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHSFE-GTQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNDNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGN NV G D+ G G DT+ L + ++N
Sbjct: 310 IGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEGVDTLKITYDNTSATA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ +++ A ++L+ +G D
Sbjct: 370 AVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIFGGAGNDELVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 69/194 (35%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDTYVIDQADELALVQEK--ANEGVDTLKITYDNTSATAAVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY- 316
N+ + +++G+ N+ + GN ANNV F +GND G G D + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVIFGGAGNDELVGGLGADIMTGGTGADRFV 441
Query: 317 -----KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+I + + I+ D N + D LS ++ D S A
Sbjct: 442 FNDLAEIGKGAASYIITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|330875264|gb|EGH09413.1| metalloprotease [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 535
Score = 193 bits (490), Expect = 1e-46, Method: Composition-based stats.
Identities = 101/424 (23%), Positives = 154/424 (36%), Gaps = 66/424 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L AR ALG WS V
Sbjct: 29 PFWLGDATGTHLTYSFHTAD---SVYATDYSRSQEPGDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY------GIG 115
D+TF E DI+F + + Y Y DVW
Sbjct: 86 ADITFTEVKDTPDNVGDIRF--GGFQGLQSLEYGQAYAPGTLGRSGDVWIGPKVNAADPA 143
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KGT +HE GHALGL H Y +D +E+ ++MSY +
Sbjct: 144 KGTDDYLTFMHETGHALGLKHSFE-GTQYNDVLLDAKFEDAR--YTIMSYTN------NY 194
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
SF TPM+ D+ A+Q IYGA GN++YK D +TI+D+GG D +D +
Sbjct: 195 SF-KPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWA---PDQSVFETIWDAGGKDTIDAS 250
Query: 235 LIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGNDVV 280
I+LN +S+IG + IA IE+ +GS+ ND +
Sbjct: 251 NQASF-VKINLNEGEFSTIGKAFLDYNDNPDAPTLMNSGLAIAYGAHIENAIGSAFNDTL 309
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVY 328
IGN NV G D+ G G DT+ L + ++N
Sbjct: 310 IGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEGVDTLKITYDNTSATA 369
Query: 329 DANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + D+ +++ A + L+ +G D
Sbjct: 370 AVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGAD 429
Query: 379 VFES 382
+
Sbjct: 430 IMTG 433
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 69/194 (35%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + + + G D L +T IDLN ++
Sbjct: 329 GGLGNDTYVIDQADELALVQEK--ANEGVDTLKITYDNTSATAAVIDLNAGPLANFE--- 383
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY- 316
N+ + +++G+ N+ + GN ANNV F +GND G G D + +
Sbjct: 384 -NVHLKGEGEF-TLLGNDRNNTLTGNDANNVIFGGAGNDKLVGGLGADIMTGGTGADRFV 441
Query: 317 -----KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+I + + I+ D N + D LS ++ D S A
Sbjct: 442 FNDLAEIGKGAASDIITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 501
Query: 372 IQVIGQDVFESMKH 385
+ H
Sbjct: 502 ADHVLSGNVNGDLH 515
>gi|307319197|ref|ZP_07598627.1| Serralysin [Sinorhizobium meliloti AK83]
gi|306895304|gb|EFN26060.1| Serralysin [Sinorhizobium meliloti AK83]
Length = 551
Score = 193 bits (489), Expect = 1e-46, Method: Composition-based stats.
Identities = 99/442 (22%), Positives = 149/442 (33%), Gaps = 86/442 (19%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF--------DITELNPNAQEVARWALG 60
T D LL + W+ + + + LN Q R AL
Sbjct: 10 TGNAYIDGLLGEWKWAIKDFTFSFPTSASFYGAGYGNSEPLKGFAVLNAAQQAATRAALD 69
Query: 61 EWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG- 115
++S V +++F E + H+D++ SS+ P YF + D W
Sbjct: 70 QFSSVANVSFTEITESATKHADLRLASSDA-----PSTAWAYFPSTAGEGGDAWFNKSSG 124
Query: 116 ------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-- 167
KG LHE GHALGL H N DS +VMSY
Sbjct: 125 HYSRPVKGNYAYVTFLHETGHALGLEHAHEGNVMPVN--------RDSMEYTVMSYRSYV 176
Query: 168 ---PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK--------- 214
+ ++GY + M+ DI A+Q +YGA GN Y+
Sbjct: 177 GASTTTGYTNETWGYAQSLMMYDIAALQHMYGADFTTHSGNTTYRWSPTSGEMFTNGIGQ 236
Query: 215 ----DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------------- 257
+ + T++D GG D D + +DL W++ +
Sbjct: 237 GAPGGNKILLTVWDGGGTDTYDFSNYA-TALKVDLRPGEWTTTSAAQLAKLHYDGSKVAI 295
Query: 258 KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N+ A ++IE+ G +GND + GN+A N + + GND G G D A
Sbjct: 296 GNIANALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGNGGNDRLIGGDGNDNLAGGA 355
Query: 312 PSY--------LYKIYRFENAIIVYD-------ANEHKQDFLSDVERLRFADQCIDSVNV 356
+ Y A IV D E D +ERL +
Sbjct: 356 GADRLDGGNGTDLANYANATAGIVADLYSPGSNTGEAAGDTYVSIERLYGSAFNDTLRGD 415
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
+ ++L A + L G D
Sbjct: 416 NRANLLNGLAGNDMLNGRDGND 437
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 3/156 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + G D LD + NY + + + N A
Sbjct: 337 GGNDRLIGGDGNDNLAGGAGADRLDGGNGTDLANYANATAGIVADLYSPGSNTGEAAGDT 396
Query: 268 ---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE + GS+ ND + G++ N+ +GND+ +G G DT + + +
Sbjct: 397 YVSIERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGSGADRLIGGGGADT 456
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + F ++ +D ++ S
Sbjct: 457 FVFETTAQSAPAFRDVIDDFASGVDRMDLRSIDANS 492
>gi|307318732|ref|ZP_07598165.1| Peptidase M10 serralysin [Sinorhizobium meliloti AK83]
gi|306895759|gb|EFN26512.1| Peptidase M10 serralysin [Sinorhizobium meliloti AK83]
Length = 1112
Score = 192 bits (488), Expect = 1e-46, Method: Composition-based stats.
Identities = 92/373 (24%), Positives = 145/373 (38%), Gaps = 51/373 (13%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY---- 88
+ L ++ ELN P + A AL W+ V L FE D F S+ +
Sbjct: 46 MAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVD---DTPFDSTTDWMEVVS 102
Query: 89 ------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
Y S ++ I D G + + +HE GH GL HPG YN
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNY 162
Query: 143 GYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--- 194
P Y + + D SVMSYF D + + S +TP+++DI AV +
Sbjct: 163 SGPGGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSASTPLMADIEAVIRRFFS 221
Query: 195 ---------YGAPKGSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLI 236
Y + G+N+Y Q I+D+GG D +D +
Sbjct: 222 TVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGADTIDFSG- 280
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIGNSANNVF 289
+DL +SS+ G+ N++I A IE+ +GS +D++IGN N
Sbjct: 281 STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTL 340
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQDFLSDVERLRFAD 348
SG D G+ G DT+F + + + N ++ + K +++VE + +AD
Sbjct: 341 DGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYAD 400
Query: 349 QCIDSVNVKQRSI 361
+ S
Sbjct: 401 ESTTQPGGGGASP 413
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 62/198 (31%), Gaps = 26/198 (13%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTESWSSIGGYEKNMTIA- 263
D+ I+ G+D LD G + I DL S+ + N TI
Sbjct: 414 PSAGDNTMTSIIFGGNGNDTLDG---GAGDDTIFGRGGDDLIIGGRDSLASRDINNTIDV 470
Query: 264 --------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+++ G GND ++G N++ +G+D+ G G+D F A
Sbjct: 471 EDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDMLSGQDGVDIFRGGAGVDT 530
Query: 316 YKIYRFEN-------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ A V D +E L +D ID + +
Sbjct: 531 VDFSKESPFQLLVNLATNVASGGTASGDTFYSIENLIGSDDRIDRFVGTSAANHFWGQGG 590
Query: 369 ED-LIQVIGQDVFESMKH 385
D G D+ +
Sbjct: 591 GDYFNGGDGNDILDGGND 608
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 58/190 (30%), Gaps = 12/190 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ +Y Y GG D + IDL + S G
Sbjct: 606 GNDGDILYGEAGNDTVIGGAGQDYLDGGSGLDTVVYAG-SPDGVTIDLANGTASGGDGDG 664
Query: 258 KNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + VI E+ GSS +D +IGN+ N +G+D G G D
Sbjct: 665 PVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNG 724
Query: 310 YAPSYLYKIYRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A S + + + D +E L + ++L
Sbjct: 725 GAGSDTADYADATSGVRLGLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGN 784
Query: 369 EDLIQVIGQD 378
+ + G D
Sbjct: 785 DTIDGGRGDD 794
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L+ +Y D + + G IE++ GS D + GN A NV
Sbjct: 720 DRLNGGAGSDTADYADATSGVRLGLAGGRSGGDTY--VSIENLAGSGFGDRLTGNGAANV 777
Query: 289 FFESSGNDVFDGSSGLDTFFYYAP 312
GND DG G DT
Sbjct: 778 LTGQGGNDTIDGGRGDDTLLGDFA 801
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ GD + + G + ID + T + + G + + G + D++ G
Sbjct: 555 ASGDTFYSIENLIGSDDRIDRFVGTSAANHFWGQGGGDYFNGGDGNDILDGGNDGDILYG 614
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ N+ +G D DG SGLDT Y I D + Q
Sbjct: 615 EAGNDTVIGGAGQDYLDGGSGLDTVVYAGSPDGVTIDLANGTASGGDGDGPVQ 667
>gi|238623348|emb|CAS06668.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 251
Score = 191 bits (486), Expect = 3e-46, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 91/242 (37%), Gaps = 26/242 (10%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P V R ++ +
Sbjct: 8 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLGTFSQFSS 67
Query: 50 NAQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A +L W+ V +TF E + D +N + P +
Sbjct: 68 LQKEQAMLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGES 127
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 128 WYLINKDYEVNKSPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 187
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK 214
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 188 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTAD 247
Query: 215 DS 216
Sbjct: 248 RD 249
>gi|227818410|ref|YP_002822381.1| outer membrane secretion protein [Sinorhizobium fredii NGR234]
gi|227337409|gb|ACP21628.1| putative outer membrane secretion protein [Sinorhizobium fredii
NGR234]
Length = 1113
Score = 191 bits (486), Expect = 3e-46, Method: Composition-based stats.
Identities = 87/371 (23%), Positives = 143/371 (38%), Gaps = 51/371 (13%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY---- 88
+ L ++ ELN P + A AL W+ V L FE D F S+ +
Sbjct: 46 IAAGTLRINVYELNDHPEYKAAAIGALEMWASVTPLKFEIVD---DAPFDSTTDWMEVVS 102
Query: 89 ------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
Y S ++ I D G + + +HE GH GL HPG YN
Sbjct: 103 PELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNY 162
Query: 143 GYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--- 194
P Y + + D SVMSYF D + + + +TP+++DI AV +
Sbjct: 163 SGPGGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETTRWSASTPLMADIEAVIRRFFS 221
Query: 195 ---------YGAPKGSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLI 236
Y + + G+N+Y Q I+D+GG D +D +
Sbjct: 222 TVDANGVRTYQHIELNTGDNVYGFGSTQYGYQLTSSGMQHDIGFVIHDTGGTDTIDFSG- 280
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIGNSANNVF 289
+DL +SS+ G+ N++I +E+ +GSS +D++IGN N
Sbjct: 281 STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADQTDYYVENGIGSSYDDILIGNDGANTL 340
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQDFLSDVERLRFAD 348
G D G+ G D +F + + + N ++ + K +++VE + +AD
Sbjct: 341 DGRGGGDRMAGNGGDDIYFVDSWDDIVREEANGGNDTVILLSRHLKIRKIANVENIIYAD 400
Query: 349 QCIDSVNVKQR 359
+
Sbjct: 401 ESTTEPGDGGD 411
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 2/113 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ GD + + G + ID + T + + G + + G + D++ G
Sbjct: 556 ASGDTFYSIENLIGSDDRIDRFIGTAAANHFWGQGGGDYFNGGDGNDILDGGNDGDILYG 615
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ ++ +G D DG SG DT Y I D + Q
Sbjct: 616 EAGDDTIIGGAGQDYLDGGSGNDTVVYAGSPDGVTIDLANGTASGGDGDGPVQ 668
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 22/47 (46%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
IE++ GS ND + GN A NV GND DG G DT
Sbjct: 756 VSIENLAGSGFNDRLTGNDAANVLTGQGGNDAIDGGRGDDTLLGDFA 802
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 12/190 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ +Y + G+D + IDL + S G
Sbjct: 607 GNDGDILYGEAGDDTIIGGAGQDYLDGGSGNDTVVYAG-SPDGVTIDLANGTASGGDGDG 665
Query: 258 KNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + I E+ VGSS D +IGN+ N +G+D G G D
Sbjct: 666 PVQIVGRGAAIRHDILAGFENAVGSSFEDHLIGNALANELSGGAGDDTLTGGGGADRLNG 725
Query: 310 YAPSYLYKIYRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A S + + + D +E L + ++L
Sbjct: 726 GAGSDTADYADATSGVRLGLSGGRSGGDRYVSIENLAGSGFNDRLTGNDAANVLTGQGGN 785
Query: 369 EDLIQVIGQD 378
+ + G D
Sbjct: 786 DAIDGGRGDD 795
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 93/311 (29%), Gaps = 37/311 (11%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F ++ + + + V + F N D+ D + + ++
Sbjct: 276 IDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADQTDYYVENGIGSSYDDILIGND 335
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ L G G G D+ Y DS+ V + D +
Sbjct: 336 GANTLDGRGGGDRMAGN---GGDDIYFVDSWDDIV---REEANGGNDTVILLSRHLKIRK 389
Query: 188 IVAVQKIYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-- 243
I V+ I A + + G+ + D I G+D LD G + I
Sbjct: 390 IANVENIIYADESTTEPGDGGDETPPSVGDDTMTSIIIGGDGNDTLDG---GAGDDTIFG 446
Query: 244 ----DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES------- 292
DL S+ + N TI + + GND + G N+
Sbjct: 447 QGGDDLIVGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILD 506
Query: 293 -----------SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G D+F G +G+DT + S + A V D +
Sbjct: 507 GGDGDDTLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNL--ATNVASGGTASGDTFYSI 564
Query: 342 ERLRFADQCID 352
E L +D ID
Sbjct: 565 ENLIGSDDRID 575
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 52/171 (30%), Gaps = 19/171 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA ++ D + +D D++ GG I L+
Sbjct: 336 GANTLDGRGGGDRMAGNGGDDIYFVDSWD----DIVREEANGGNDTVILLSRHLKIRKIA 391
Query: 256 YEKNMTIAQHTVIESVVGSS------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+N+ A + E G G+D + + GND DG +G DT F
Sbjct: 392 NVENIIYADESTTEPGDGGDETPPSVGDDTMTS-----IIIGGDGNDTLDGGAGDDTIFG 446
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
L + + + + D+E +D D++ +
Sbjct: 447 QGGDDL----IVGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGN 493
>gi|238623346|emb|CAS06667.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 240
Score = 190 bits (483), Expect = 5e-46, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 91/233 (39%), Gaps = 26/233 (11%)
Query: 1 MHNIKPVYTTERIADHLLR-DQYWSNYFIRY----------KPDVLTTHRLSFDITELNP 49
+ N KP TT++ AD L R W + P R ++ +
Sbjct: 8 LVNGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPAGYATRGLGTFSQFSA 67
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 68 LQKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGES 127
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFL 159
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 128 WYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRA 187
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
SVMSY+ ++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 188 YSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVY 240
>gi|332561596|ref|ZP_08415909.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
gi|332274098|gb|EGJ19416.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
Length = 1100
Score = 190 bits (483), Expect = 6e-46, Method: Composition-based stats.
Identities = 88/387 (22%), Positives = 141/387 (36%), Gaps = 51/387 (13%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
R + L ++T LN P+ + A AL W+ V L FE D F
Sbjct: 24 GALNRSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVD---DAPFD 80
Query: 83 SSNNGY----------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + S ++ I D G + + +HE GH
Sbjct: 81 RATDWMQVVSPEIGEPSDGSAFSSNRYVSIGQRFHDTEPDKTALGGYVFDSFVHEFGHEF 140
Query: 133 GLMHPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GL HPG YN P Y + + D SVMSYF D + + S TP+++D
Sbjct: 141 GLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSATTPLMAD 199
Query: 188 IVAVQKI------------YGAPKGSLGNNIYKIEVQ---------QKDSPFIQTIYDSG 226
I AV + Y + G++IY I+D+G
Sbjct: 200 IEAVIRRFFSTVDEDGVRTYQPIDLNTGDDIYGFNSTVFGYELMSEGLQHDIGFVIHDTG 259
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDV 279
G D +D + +DL +SS+ G+ N++I A IE+ +GS D
Sbjct: 260 GMDTIDFSG-STAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEAGIGSRFADT 318
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQDFL 338
+IGN +NV G D G G DT+F + + + N I+ +
Sbjct: 319 IIGNDGDNVLDGRGGGDRMAGFGGDDTYFVDSADDIVREFADGGNDTIIVLTEGLDLGEV 378
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYT 365
++VE + +A + + + +
Sbjct: 379 ANVETIIYAGGSAPAPDEGTPAPVAGA 405
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 16/189 (8%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ GN I+ + GG D L I DL ++ S +
Sbjct: 423 NGGAGGNTIFGLAGDDLLI---------GGRDSLASRDINNTIAIADLEDQTESD----D 469
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + ++++G +G+D + G + N++ G DVF G +G+DT Y S
Sbjct: 470 GNDALYGGAGNDTIMGGAGDDTLDGGAGNDLLRGQDGVDVFRGGAGIDTVDYGMESPFQL 529
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQVIG 376
+ E V D +E L +D ID + + D G
Sbjct: 530 LVNLETN--VASGGTASGDTFYSIENLIGSDDRIDRFIGTSDANHFWGRGGGDYFNGRGG 587
Query: 377 QDVFESMKH 385
D+ +
Sbjct: 588 DDILDGGAD 596
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 62/199 (31%), Gaps = 14/199 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ +Y Y +GG D + +DL+ +
Sbjct: 597 GDILYGEGGNDTIIGGAGQDYMNGGAGIDTVVYAG-SSAGVTVDLSQGTARGGDADGPVQ 655
Query: 261 TIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + +VI E+VVGS +D +IG+ +NV G+D+ G G D A
Sbjct: 656 IVGRGSVIRHDILAGFENVVGSFHDDRLIGDGKSNVLSGGRGDDILTGGGGADRLNGGAG 715
Query: 313 SYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + D +E L + + ++L + L
Sbjct: 716 RDTADYSTAARGVALSLTLGSSDGDSYRSIENLAGSGHADVMIGDTAANVLTGQGGNDTL 775
Query: 372 IQVIGQDVFESMKHFYEFG 390
G DV + F G
Sbjct: 776 FGRGGDDVL--LGDFAPEG 792
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 12/172 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ GD + + G + ID + T + G + + G + D++ G
Sbjct: 543 ASGDTFYSIENLIGSDDRIDRFIGTSDANHFWGRGGGDYFNGRGGDDILDGGADGDILYG 602
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------- 335
N+ +G D +G +G+DT Y S + + DA+ Q
Sbjct: 603 EGGNDTIIGGAGQDYMNGGAGIDTVVYAGSSAGVTVDLSQGTARGGDADGPVQIVGRGSV 662
Query: 336 ---DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L+ E + + + + ++L + L G D
Sbjct: 663 IRHDILAGFENVVGSFHDDRLIGDGKSNVLSGGRGDDILTGGGGADRLNGGA 714
>gi|304394845|ref|ZP_07376731.1| secreted protease C [Ahrensia sp. R2A130]
gi|303293036|gb|EFL87450.1| secreted protease C [Ahrensia sp. R2A130]
Length = 594
Score = 190 bits (483), Expect = 6e-46, Method: Composition-based stats.
Identities = 89/433 (20%), Positives = 142/433 (32%), Gaps = 72/433 (16%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P +T D L+ N I Y + A W++V
Sbjct: 2 PNFTNNAYQDALIEGYRLGNTTIEYYLADTAAGN-------FTQIERTAFAQATALWNEV 54
Query: 66 VDLTFEETSIHSDIKFI----------------------------------SSNNGYVCT 91
++ F ET++ +D +FI +
Sbjct: 55 ANINFAETAVQADAEFIESLYVSGADGTSGNLGVHQNFIGSNTTVVDTITIDGTFATALS 114
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
Y+ F + G+ +G I +HE+GH LGL H P +
Sbjct: 115 GSYNRSGFGWDETNA----NGGLQRGGIGFATIVHELGHGLGLDHTHITGSNDPHFFPGA 170
Query: 152 DYEND-------SFLTSVMSYFMPQDSMMDA-----SFGYCATPMVSDIVAVQKIYGAPK 199
E D S L S+MSY + + ++G PM DI VQ +YGA
Sbjct: 171 PGEYDAGNNGLNSELYSIMSYRSGPEIRPNFIGETQNYGTVGGPMAFDIATVQFLYGANM 230
Query: 200 GS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-------- 250
+ G+++Y + + I+D+GG D + G IDL +
Sbjct: 231 TTRTGDDVYTMPSANAPGTYWSAIWDAGGTDTISHAG-GTAAVTIDLRAATLQDEVGGGG 289
Query: 251 --SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S +G TIA VIE+ G D ++GN+A N +G D G +G D +
Sbjct: 290 FISRVGTIYGGYTIANGVVIENATGGQAADTLVGNAAANALDGGAGADTMTGGAGDDYYV 349
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTAS 367
E + I+ D +VE LR + + R I++ +
Sbjct: 350 VENVGDTVTELAGEGSDIIDTFVS--YDVPVNVEVLRMQGTADLGTNGSVNRDIIQGNSG 407
Query: 368 YEDLIQVIGQDVF 380
+ G D+
Sbjct: 408 NNYINGAGGLDLM 420
Score = 40.5 bits (93), Expect = 0.95, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 27/170 (15%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y I+ Q I +GG D + T + V +
Sbjct: 422 GGSGNDTYTIDDSQDA-----VIEAAGGGDDVIYTSVDYV----------------LLGD 460
Query: 260 MTIAQHTVIESVV---GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY---APS 313
I + E+ V G + ++ +IGN NV G D G G D F +
Sbjct: 461 QEIETAILTENAVILRGDNSDNQLIGNDFINVLEGKGGTDYLLGLGGDDIFQVSLEANAT 520
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
L FE A ++ + ++ + + + ++ ++
Sbjct: 521 DLDVFGDFEGAGVIGGDRIALDAAIWGMDGIVYQVSQTSFIVATAQNTMQ 570
>gi|163743675|ref|ZP_02151050.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
gi|161383042|gb|EDQ07436.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
Length = 1112
Score = 190 bits (482), Expect = 8e-46, Method: Composition-based stats.
Identities = 85/380 (22%), Positives = 144/380 (37%), Gaps = 45/380 (11%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSI---HSDI 79
R + L ++T LN P ++ A AL WS V L FE +D+
Sbjct: 36 GALGRSLTPEIAAEPLVINLTGLNDHPAYKDAAIGALEMWSSVTPLQFEIVDDAPYDADL 95
Query: 80 KFISSNNGYVC----TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ + + + S ++ + D G + +HE GH GL
Sbjct: 96 HWMEVVSPEIGEQSDGSAFSSDRYVSVGQRFHDTEPDITDLGGYVFDTFVHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D D + TP++ DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGED-TRWSAVTPLMGDIEA 214
Query: 191 VQKIYGAP------------KGSLGNNIYKIEVQ---------QKDSPFIQTIYDSGGDD 229
+ + Y + + +N Y I+D+GGDD
Sbjct: 215 IIRRYFSTVDDEGVRTYQTINLNTDDNTYGFNSTEYGYLLTEDGPQHDIGFVIHDTGGDD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I +E+ +GSS +D++IG
Sbjct: 275 TIDFSG-STASTILDLRAGEFSSVNGHNNNVSIFAGHNADQTEYYVETGIGSSYDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFLSDV 341
N +NV +GND G+ G D +F + + + N ++ A+ +++V
Sbjct: 334 NDGDNVLDGRAGNDRMAGNGGDDVYFVDSIDDIVREDENGGNDTVIVVADGLDLGDIANV 393
Query: 342 ERLRFADQCIDSVNVKQRSI 361
E + +A +
Sbjct: 394 ETIIYAGGTPGTPGSDAPDA 413
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
IE++ GS ND + G++A+NV G+D G++G D I
Sbjct: 756 VSIENLSGSGFNDRMKGDAADNVLTGQGGDDTLRGAAGDDILLGDFADAADAI 808
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 44/186 (23%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT------IAQHTVIESVVGSSGND 278
G D +D + + ++L + +S G + I I+ +G+S N+
Sbjct: 526 GAGIDTVDFSQESPFQLLVNL-ETNVASGGTASGDTFYSIENLIGSDDRIDRFIGTSDNN 584
Query: 279 ---------------------------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G ++V SG D DG +G+DT Y A
Sbjct: 585 HFWGQGGGDVFNGGGGDDTLDGGNDGDMLYGEDGDDVLIGGSGQDYLDGGAGVDTVVYTA 644
Query: 312 PSYLYKIYRFENAI----------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
S + IV + D + DVE + + +
Sbjct: 645 SSVGVTVDLENGTARGGDADGPVQIVGRGTTIRHDIIVDVENAVGSLHDDHLIGTNGENA 704
Query: 362 LEYTAS 367
L A
Sbjct: 705 LSGGAG 710
Score = 44.7 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 55/176 (31%), Gaps = 14/176 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI--------ESVVGSSG 276
G D + T V +DL + + + T I E+ VGS
Sbjct: 634 GAGVDTVVYT-ASSVGVTVDLENGTARGGDADGPVQIVGRGTTIRHDIIVDVENAVGSLH 692
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ- 335
+D +IG + N +G+DV G G D A S Y + + K
Sbjct: 693 DDHLIGTNGENALSGGAGDDVLSGGGGADLLDGGAGSDTAD-YANATRGVKLNMTNGKTE 751
Query: 336 -DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D +E L + ++L + L G D+ + F +
Sbjct: 752 GDTYVSIENLSGSGFNDRMKGDAADNVLTGQGGDDTLRGAAGDDIL--LGDFADAA 805
Score = 40.9 bits (94), Expect = 0.74, Method: Composition-based stats.
Identities = 58/323 (17%), Positives = 92/323 (28%), Gaps = 46/323 (14%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
D+ F D S + + F +N +V + +
Sbjct: 262 DIGFVIHDTGGDDTIDFSGSTASTILDLRAGEFSSVNGHNNNVSIFAGHNADQTEYYV-- 319
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL-------TSVMSYFM----PQDSMMDA 175
E G +G + G +D ND V S ++ D
Sbjct: 320 ETG--IGSSYDDILIGNDGDNVLDGRAGNDRMAGNGGDDVYFVDSIDDIVREDENGGNDT 377
Query: 176 SFGYCATPMVSDIVAVQK-IY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
+ DI V+ IY G G+ G++ + I ++ LD
Sbjct: 378 VIVVADGLDLGDIANVETIIYAGGTPGTPGSDAPDAPNEGPTDATDSLIIGDDSNETLDG 437
Query: 234 TLIGGVKNYI------DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
G N I DL ++ + N TI + + GND + G N+
Sbjct: 438 ---GAGGNTIFGLGGDDLIIGGRDTLASRDINNTIDIADLEDQTETDDGNDALYGGDGND 494
Query: 288 VFF------------------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+G DVF G +G+DT + S + E V
Sbjct: 495 TINGGAGDDLLDGGDGDDLLRGQAGVDVFRGGAGIDTVDFSQESPFQLLVNLETN--VAS 552
Query: 330 ANEHKQDFLSDVERLRFADQCID 352
D +E L +D ID
Sbjct: 553 GGTASGDTFYSIENLIGSDDRID 575
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 18/52 (34%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G + +V GND+ DG DT ++ A + + +
Sbjct: 977 GEAGADVLRGGRGNDLLDGGLMADTLIGGKGDDFFRFSTELGADNIDEIRDF 1028
>gi|238623392|emb|CAS06690.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 267
Score = 189 bits (481), Expect = 9e-46, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 91/243 (37%), Gaps = 28/243 (11%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS-----------FDITELNP 49
N KP YT ++ A LLRD + ++ K D+ T S ++ N
Sbjct: 7 VNGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNT 66
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 67 QQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 126
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 127 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTR 186
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 187 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNT 246
Query: 214 KDS 216
Sbjct: 247 GRD 249
>gi|163736817|ref|ZP_02144235.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
gi|161389421|gb|EDQ13772.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
Length = 1112
Score = 189 bits (481), Expect = 1e-45, Method: Composition-based stats.
Identities = 85/380 (22%), Positives = 144/380 (37%), Gaps = 45/380 (11%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSI---HSDI 79
R + L ++T LN P ++ A AL WS V L FE +D+
Sbjct: 36 GALGRSLTPEIAAEPLVINLTGLNDHPAYKDAAIGALEMWSSVTPLQFEIVDDAPYDADL 95
Query: 80 KFISSNNGYVC----TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ + + + S ++ + D G + +HE GH GL
Sbjct: 96 HWMEVVSPEIGEQSDGSAFSSDRYVSVGQRFHDTEPDITDLGGYVFDTFVHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D D + TP++ DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGED-TRWSAVTPLMGDIEA 214
Query: 191 VQKIYGAP------------KGSLGNNIYKIEVQ---------QKDSPFIQTIYDSGGDD 229
+ + Y + + +N Y I+D+GGDD
Sbjct: 215 IIRRYFSTVDDEGVRTYQTINLNTDDNTYGFNSSEYGYLLTEDGPQHDIGFVIHDTGGDD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I +E+ +GSS +D++IG
Sbjct: 275 TIDFSG-STASTILDLRAGEFSSVNGHNNNVSIFAGHNADQTEYYVETGIGSSYDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFLSDV 341
N +NV +GND G+ G D +F + + + N ++ A+ +++V
Sbjct: 334 NDGDNVLDGRAGNDRMAGNGGDDVYFVDSIDDIVREDENGGNDTVIVVADGLDLGDIANV 393
Query: 342 ERLRFADQCIDSVNVKQRSI 361
E + +A +
Sbjct: 394 ETIIYAGGTPGTPGSDAPDA 413
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
IE++ GS ND + G++A+NV GND G++G D I
Sbjct: 756 VSIENLSGSGFNDRMKGDAADNVLTGQGGNDTLRGAAGDDILLGDFADAADAI 808
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 44/186 (23%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT------IAQHTVIESVVGSSGND 278
G D +D + + ++L + +S G + I I+ +G+S N+
Sbjct: 526 GAGIDTVDFSQESPFQLLVNL-ETNVASGGTASGDTFYSIENLIGSDDRIDRFIGTSDNN 584
Query: 279 ---------------------------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G ++V SG D DG +G+DT Y A
Sbjct: 585 HFWGQGGGDVFNGGGGDDTLDGGNDGDMLYGEDGDDVLIGGSGQDYLDGGAGVDTVVYTA 644
Query: 312 PSYLYKIYRFENAI----------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
S + IV + D + DVE + + +
Sbjct: 645 SSVGVTVDLENGTARGGDADGPVQIVGRGTTIRHDIIVDVENAVGSLHDDHLIGTNGENN 704
Query: 362 LEYTAS 367
L A
Sbjct: 705 LSGGAG 710
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 55/176 (31%), Gaps = 14/176 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI--------ESVVGSSG 276
G D + T V +DL + + + T I E+ VGS
Sbjct: 634 GAGVDTVVYT-ASSVGVTVDLENGTARGGDADGPVQIVGRGTTIRHDIIVDVENAVGSLH 692
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ- 335
+D +IG + N +G+DV G G D A S Y + + K
Sbjct: 693 DDHLIGTNGENNLSGGAGDDVLSGGGGADLLDGGAGSDTAD-YANATRGVKLNMTNGKTE 751
Query: 336 -DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D +E L + ++L + L G D+ + F +
Sbjct: 752 GDTYVSIENLSGSGFNDRMKGDAADNVLTGQGGNDTLRGAAGDDIL--LGDFADAA 805
Score = 40.9 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 56/320 (17%), Positives = 91/320 (28%), Gaps = 40/320 (12%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
D+ F D S + + F +N +V + +
Sbjct: 262 DIGFVIHDTGGDDTIDFSGSTASTILDLRAGEFSSVNGHNNNVSIFAGHNADQTEYYV-- 319
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL-------TSVMSYFM----PQDSMMDA 175
E G +G + G +D ND V S ++ D
Sbjct: 320 ETG--IGSSYDDILIGNDGDNVLDGRAGNDRMAGNGGDDVYFVDSIDDIVREDENGGNDT 377
Query: 176 SFGYCATPMVSDIVAVQK-IY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
+ DI V+ IY G G+ G++ + I ++ LD
Sbjct: 378 VIVVADGLDLGDIANVETIIYAGGTPGTPGSDAPDAPNEGPTDALDSLIIGDDSNETLDG 437
Query: 234 TLIGGV---KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
G + DL ++ + N TI + + GND + G N+
Sbjct: 438 GAGGNTIFGRGGDDLIIGGRDTLASRDINNTIDIADLEDQTETDDGNDALYGGDGNDTIN 497
Query: 291 ------------------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+G DVF G +G+DT + S + E V
Sbjct: 498 GGAGDDLLDGGDGDDLLRGQAGVDVFRGGAGIDTVDFSQESPFQLLVNLETN--VASGGT 555
Query: 333 HKQDFLSDVERLRFADQCID 352
D +E L +D ID
Sbjct: 556 ASGDTFYSIENLIGSDDRID 575
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 18/52 (34%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G + +V GND+ DG DT ++ A + + +
Sbjct: 977 GEAGADVLRGGRGNDLLDGGLMADTLIGGKGDDFFRFSTELGADNIDEIRDF 1028
>gi|238623354|emb|CAS06671.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 250
Score = 189 bits (481), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 93/240 (38%), Gaps = 24/240 (10%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--TSIHSDIKFI 82
Y P V R ++ + +E A+ +L W+ V +TF E + D
Sbjct: 10 TYTFLTAPPVGYATRGLGTFSQFSSLQKEQAKLSLESWADVAKVTFTEGPAARGGDGHMT 69
Query: 83 SSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+N + P + +K G+G HEIGH LGL
Sbjct: 70 FANFSASNGGAAFAYLPSSARKGESWYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLS 129
Query: 136 HPGSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDAS----FGYCATPMVSDIVA 190
HPG YN G D Y D+ SVMSY+ ++ + Y + P++ DI A
Sbjct: 130 HPGDYNAGNGNPTYRDAVYGEDTRAYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAA 189
Query: 191 VQKIYGAP-KGSLGNNIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
VQK+YGA + G+ +Y S I +++D GG+D LD + +
Sbjct: 190 VQKLYGANLETRAGDTVYGFNSTADRDYYSATSASSKLIFSVWDGGGNDTLDFSGFTQNQ 249
>gi|221218286|ref|YP_002524313.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
gi|221163313|gb|ACM04279.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
Length = 1100
Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats.
Identities = 88/387 (22%), Positives = 141/387 (36%), Gaps = 51/387 (13%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
R + L ++T LN P+ + A AL W+ V L FE D F
Sbjct: 24 GALNRSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVD---DAPFD 80
Query: 83 SSNNGY----------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + S ++ I D G + + +HE GH
Sbjct: 81 RATDWMEVVSPEIGEPSDGSAFSSNRYVSIGQRFHDTEPDKTALGGYVFDSFVHEFGHEF 140
Query: 133 GLMHPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GL HPG YN P Y + + D SVMSYF D + + S TP+++D
Sbjct: 141 GLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSATTPLMAD 199
Query: 188 IVAVQKI------------YGAPKGSLGNNIYKIEVQ---------QKDSPFIQTIYDSG 226
I AV + Y + G++IY I+D+G
Sbjct: 200 IEAVIRRFFSTVDEDGVRTYQPIDLNTGDDIYGFNSSVFGYELMSEGLQHDIGFVIHDTG 259
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDV 279
G D +D + +DL +SS+ G+ N++I A IE+ +GS D
Sbjct: 260 GMDTIDFSG-STAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEAGIGSRFADT 318
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQDFL 338
+IGN +NV G D G G DT+F + + + N I+ +
Sbjct: 319 LIGNDGDNVLDGRGGGDRMAGFGGDDTYFVDSADDIVREFADGGNDTIIVLTEGLDLGEV 378
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYT 365
++VE + +A + + + +
Sbjct: 379 ANVETIIYAGGSAPAPDEGTTAPVAGA 405
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 62/199 (31%), Gaps = 14/199 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ +Y Y +GG D + +DL+ +
Sbjct: 597 GDILYGEGGNDTIIGGAGQDYMNGGAGIDTVVYAG-SSAGVTVDLSQGTARGGDADGPVQ 655
Query: 261 TIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + +VI E+VVGS +D +IG+ +NV G+D+ G G D A
Sbjct: 656 IVGRGSVIRHDILAGFENVVGSFHDDRLIGDGKSNVLSGGRGDDILTGGGGADRLNGGAG 715
Query: 313 SYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + D +E L + + ++L + L
Sbjct: 716 RDTADYSTAARGVALSLTLGSSDGDSYRSIENLAGSGHADVMIGDTAANVLTGQGGNDTL 775
Query: 372 IQVIGQDVFESMKHFYEFG 390
G DV + F G
Sbjct: 776 FGRGGDDVL--LGDFAPEG 792
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 26/215 (12%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNT 247
IY + V + + G D L+ G N I DL
Sbjct: 385 IYAGGSAPAPDEGTTAPVAGAGGTLGSILMGTEGTDTLNG---GAGGNTIFGLAGDDLLI 441
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+ + N TIA + + GND + G + N+ +G+D DG +G D
Sbjct: 442 GGRDSLASRDINNTIAIADLEDQTESDDGNDALYGGAGNDTIMGGAGDDTLDGGAGNDLL 501
Query: 308 FYYAPSYLYKIYRFENAII----------------VYDANEHKQDFLSDVERLRFADQCI 351
+++ + + V D +E L +D I
Sbjct: 502 RGQDGVDVFRGGAGIDTVDYGMESPFQLLVNLETNVASGGTASGDTFYSIENLIGSDDRI 561
Query: 352 DSVNVKQRSILEYTASYED-LIQVIGQDVFESMKH 385
D + + D G D+ +
Sbjct: 562 DRFIGTSDANHFWGRGGGDYFNGRGGDDILDGGAD 596
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 12/172 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ GD + + G + ID + T + G + + G + D++ G
Sbjct: 543 ASGDTFYSIENLIGSDDRIDRFIGTSDANHFWGRGGGDYFNGRGGDDILDGGADGDILYG 602
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------- 335
N+ +G D +G +G+DT Y S + + DA+ Q
Sbjct: 603 EGGNDTIIGGAGQDYMNGGAGIDTVVYAGSSAGVTVDLSQGTARGGDADGPVQIVGRGSV 662
Query: 336 ---DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L+ E + + + + ++L + L G D
Sbjct: 663 IRHDILAGFENVVGSFHDDRLIGDGKSNVLSGGRGDDILTGGGGADRLNGGA 714
>gi|197105378|ref|YP_002130755.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
gi|196478798|gb|ACG78326.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
Length = 662
Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats.
Identities = 87/371 (23%), Positives = 135/371 (36%), Gaps = 48/371 (12%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFD-------ITELNPNAQEVARWALGE 61
+ + I D LL WS + + + L Q R AL
Sbjct: 10 SGDPIVDGLLFGSKWSGTSLTFSFPASVADLADYATPLDPTYFGVLEAAGQTAVRAALAR 69
Query: 62 WSKVVDLTFEETSIHS--DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI----- 114
W+ V +TF E + + D++ ++G + T R F + + D+ +
Sbjct: 70 WAAVAAVTFTEVAPSAAADLRIYHYDDGTLFTARV--VAFPDATPEAGDLQFGSMFVGPD 127
Query: 115 -GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM----PQ 169
G +HEIGHALGL HP G+P D + ++MSY P
Sbjct: 128 WSPGNYHYFTVVHEIGHALGLKHPHDTPNGFPAADSAVDAVAE----TIMSYRSYVGGPM 183
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
+ Y PM SDI A+Q +YG + G+ Y + S Q ++D GG
Sbjct: 184 GGYSLQAGSYPVGPMPSDIAAIQHLYGPNWATNAGDTTYTFDP--SASVIFQAVWDGGGT 241
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGY-------------EKNMTIAQ------HTVIE 269
D + +IDL WS +GG N+ ++IE
Sbjct: 242 DTYNFASYA-ADLHIDLRAGEWSDLGGQYAVLDTGDASIRPSGNVANPHLYQGDLRSLIE 300
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ VG SG+D + GN A N +G+D G G DT + + + +
Sbjct: 301 NAVGGSGDDTLTGNQAANTLTGGAGDDSLVGGDGADTLVGGSGNDTLSGGAGSDRFTLGG 360
Query: 330 ANEHKQDFLSD 340
+ DFL+
Sbjct: 361 GGDVIADFLAG 371
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 33/78 (42%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++ G + + + +++ G G+D + G + ++V G+DV +G G D
Sbjct: 496 GAADTVYGGQGDDRVFGDEGDDAIYGDMGSDRLDGGTGDDVAHGGPGDDVVEGGQGADLL 555
Query: 308 FYYAPSYLYKIYRFENAI 325
+ + ++ I
Sbjct: 556 YGGKDADTVSGGAGDDWI 573
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 32/132 (24%), Gaps = 10/132 (7%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S + T + V+GS D V GN ++ D G G D
Sbjct: 450 PGEGSDFVVLSQEGTTFAGAGADWVLGSIEGDWVHGNQGDDYLHGYGAADTVYGGQGDDR 509
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F I D + D + + + +L
Sbjct: 510 VFGDEGDDA----------IYGDMGSDRLDGGTGDDVAHGGPGDDVVEGGQGADLLYGGK 559
Query: 367 SYEDLIQVIGQD 378
+ + G D
Sbjct: 560 DADTVSGGAGDD 571
>gi|77404637|ref|YP_345211.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77390287|gb|ABA81470.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 1112
Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats.
Identities = 88/387 (22%), Positives = 141/387 (36%), Gaps = 51/387 (13%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
R + L ++T LN P+ + A AL W+ V L FE D F
Sbjct: 36 GALNRSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVD---DAPFD 92
Query: 83 SSNNGY----------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + S ++ I D G + + +HE GH
Sbjct: 93 RATDWMEVVSPEIGEPSDGSAFSSNRYVSIGQRFHDTEPDKTALGGYVFDSFVHEFGHEF 152
Query: 133 GLMHPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GL HPG YN P Y + + D SVMSYF D + + S TP+++D
Sbjct: 153 GLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGID-VGETSRWSATTPLMAD 211
Query: 188 IVAVQKI------------YGAPKGSLGNNIYKIEVQ---------QKDSPFIQTIYDSG 226
I AV + Y + G++IY I+D+G
Sbjct: 212 IEAVIRRFFSTVDEDGVRTYQTIDLNTGDDIYGFNSSVFGYELMSEGLQHDIGFVIHDTG 271
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDV 279
G D +D + +DL +SS+ G+ N++I A IE+ +GS D
Sbjct: 272 GMDTIDFSG-STAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEAGIGSRFADT 330
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQDFL 338
+IGN +NV G D G G DT+F + + + N I+ +
Sbjct: 331 LIGNDGDNVLDGRGGGDRMAGFGGDDTYFVDSADDIVREFADGGNDTIIVLTEGLDLGEV 390
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYT 365
++VE + +A + + + +
Sbjct: 391 ANVETIIYAGGSAPAPDEGTPAPVAGA 417
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 16/189 (8%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ GN I+ + GG D L I DL ++ S +
Sbjct: 435 NGGAGGNTIFGLAGDDLLI---------GGRDSLASRDINNTIAIADLEDQTESD----D 481
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + ++++G +G+D + G + N++ G DVF G +G+DT Y S
Sbjct: 482 GNDALYGGAGNDTIMGGAGDDTLDGGAGNDLLRGQDGVDVFRGGAGIDTVDYGMESPFQL 541
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQVIG 376
+ E V D +E L +D ID + + D G
Sbjct: 542 LVNLETN--VASGGTASGDTFYSIENLIGSDDRIDRFIGTSDANHFWGRGGGDYFNGRGG 599
Query: 377 QDVFESMKH 385
D+ +
Sbjct: 600 DDILDGGAD 608
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 62/199 (31%), Gaps = 14/199 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ +Y Y +GG D + +DL+ +
Sbjct: 609 GDILYGEGGNDTIIGGAGQDYMNGGAGIDTVVYAG-SSAAVTVDLSQGTARGGDADGPVQ 667
Query: 261 TIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + +VI E+VVGS +D +IG+ +NV G+D+ G G D A
Sbjct: 668 IVGRGSVIRHDILAGFENVVGSFHDDRLIGDGKSNVLSGGRGDDILTGGGGADRLNGGAG 727
Query: 313 SYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + D +E L + + ++L + L
Sbjct: 728 RDTADYSTAARGVALSLTLGSSDGDSYRSIENLAGSGHADVMIGDTAANVLTGQGGNDTL 787
Query: 372 IQVIGQDVFESMKHFYEFG 390
G DV + F G
Sbjct: 788 FGRGGDDVL--LGDFAPEG 804
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 12/172 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ GD + + G + ID + T + G + + G + D++ G
Sbjct: 555 ASGDTFYSIENLIGSDDRIDRFIGTSDANHFWGRGGGDYFNGRGGDDILDGGADGDILYG 614
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------- 335
N+ +G D +G +G+DT Y S + + DA+ Q
Sbjct: 615 EGGNDTIIGGAGQDYMNGGAGIDTVVYAGSSAAVTVDLSQGTARGGDADGPVQIVGRGSV 674
Query: 336 ---DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L+ E + + + + ++L + L G D
Sbjct: 675 IRHDILAGFENVVGSFHDDRLIGDGKSNVLSGGRGDDILTGGGGADRLNGGA 726
>gi|238623368|emb|CAS06678.1| alkaline metalloprotease [Pseudomonas sp. W30a]
Length = 284
Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 104/273 (38%), Gaps = 37/273 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQE------- 53
N KP YT ++ A LLRD + ++ K D+ T S + +N +
Sbjct: 12 INGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNA 71
Query: 54 ----VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
A A+ WS V ++TF E + D N + P + Y
Sbjct: 72 QQKAQAALAMQSWSDVANVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGT 131
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 SWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYKDATYGQDTR 191
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE--- 210
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 192 GYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 251
Query: 211 ------VQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 252 GRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 284
>gi|119489451|ref|ZP_01622231.1| Peptidase M10A and M12B, matrixin and adamalysin [Lyngbya sp. PCC
8106]
gi|119454724|gb|EAW35870.1| Peptidase M10A and M12B, matrixin and adamalysin [Lyngbya sp. PCC
8106]
Length = 594
Score = 188 bits (477), Expect = 3e-45, Method: Composition-based stats.
Identities = 77/300 (25%), Positives = 124/300 (41%), Gaps = 22/300 (7%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
+ + + +A + W +V + F + I +F
Sbjct: 15 NFIAFSADQITIAEQSFQLWEEVSGIDFVPVADTGAGGQIRLGARTDLIGNGAYAHFPGN 74
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTS 161
N D+W +HEIGHA+GL HPG+Y+ G D+ +
Sbjct: 75 NAGDGDIW---FDPNWNNLQAMIHEIGHAVGLKHPGNYDSTGNLPPPPFLPSSEDNKQYT 131
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQ 220
VM+Y S +++S TPM+ DI A+Q +YGA + GN+ Y ++ F++
Sbjct: 132 VMAYPAHPGSGVESS-----TPMLYDIAAIQYLYGANTTTRTGNDTYSWN---PNTAFVE 183
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK--------NMTIAQHTVIESVV 272
TI+D+GG D +D + IDL ++SSIG N+ IA IE+ V
Sbjct: 184 TIWDAGGIDTID-AGNQTLDAAIDLTAGAFSSIGPRSNGSNTPASNNLAIAYDVTIENAV 242
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G SG+D + GN+A+N G+D G G DT + + + + N+
Sbjct: 243 GGSGDDELRGNTASNDLQGGGGDDYLFGDDGTDTLDGETGNDFLVGWNGSDTLYGEVGND 302
>gi|289673120|ref|ZP_06494010.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae FF5]
Length = 419
Score = 188 bits (476), Expect = 4e-45, Method: Composition-based stats.
Identities = 98/403 (24%), Positives = 148/403 (36%), Gaps = 71/403 (17%)
Query: 10 TERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQEVARW 57
T+ LL +W S + Y + + D L A+
Sbjct: 18 TDDRVTSLLWGPFWLGDSSGTHLTYSFHRADSVYATDYSRSQEPGDAYSLTDAQAAAAKS 77
Query: 58 ALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRYDSRY---FMEINF 104
AL WS V D+ F E DI+F + G P R ++ N
Sbjct: 78 ALDAWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNV 137
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+ AD KGT +HE GHALGL H Y +D +E+ ++MS
Sbjct: 138 NAAD-----PAKGTDDYLTFMHETGHALGLKHSFE-ASQYNDVLLDAKFEDAR--YTIMS 189
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIY 223
Y + SF TPM+ D+ A+Q IYGA G+++YK Q +TI+
Sbjct: 190 YTN------NYSF-KPTTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFETIW 239
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIE 269
D+GG D +D + I+LN +S+IG + IA IE
Sbjct: 240 DAGGKDTIDASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIE 298
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----------- 318
+ +GS+ ND +IGN +NV G D G G DT+ L +
Sbjct: 299 NAIGSAFNDTLIGNELDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTL 358
Query: 319 -YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
++N + L++ E + + +V R+
Sbjct: 359 KITYDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRN 401
>gi|254562393|ref|YP_003069488.1| hypothetical protein METDI4008 [Methylobacterium extorquens DM4]
gi|254269671|emb|CAX25643.1| conserved hypothetical protein, putative protease-like protein
[Methylobacterium extorquens DM4]
Length = 713
Score = 188 bits (476), Expect = 4e-45, Method: Composition-based stats.
Identities = 87/411 (21%), Positives = 140/411 (34%), Gaps = 57/411 (13%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD 67
+ + + +L W + Y + I + N + + S +
Sbjct: 10 SDSSLINAVLAPNKWDATTLNYGFQIQ--DIDQNGIADFNEGQWRGFYKSNFDNISSFTN 67
Query: 68 LTFEETSI-----HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR-YGIGKGTILS 121
LTF ETS + + + P + + V + S
Sbjct: 68 LTFRETSFEESTLGQILTVGGGGSSFDPHPGMPNGNTHTSVGIQGTVAEASDVVFRGQWS 127
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSY----FMPQDSMMD 174
HEIGH+LGL HP G + D + S L +VMSY + +
Sbjct: 128 EVWYHEIGHSLGLDHPFERPGAIAGVRSEADLGTNFLNSSLYTVMSYSPFAWGEDNPWTT 187
Query: 175 AS-------FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
A + M DI A+Q +YGA + G+ +Y + + TI+D+GG
Sbjct: 188 AKDAGKTFMNASVGSYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTGG 247
Query: 228 DDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSS-- 275
+D + +G + IDL + S+ IA IE+ +G S
Sbjct: 248 NDTIRY--VGSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETAIGGSKD 305
Query: 276 ----------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
GND + G + N+V +G+D DG G+D + S Y I
Sbjct: 306 DILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGDGIDAARFAGQSRDYAIV 365
Query: 320 ----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+A V D L+ +E L F D ++S V + A
Sbjct: 366 YDASTTASAFAVKHIATGALDTLASIETLVFDDTALESQGVFTHLEARFGA 416
>gi|218531476|ref|YP_002422292.1| hypothetical protein Mchl_3544 [Methylobacterium chloromethanicum
CM4]
gi|218523779|gb|ACK84364.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 713
Score = 188 bits (476), Expect = 4e-45, Method: Composition-based stats.
Identities = 89/407 (21%), Positives = 138/407 (33%), Gaps = 69/407 (16%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD 67
+ + + L+ W + Y +++ + + + S +
Sbjct: 10 SDSSLVNALITRYKWGENTLNYGFKAQ--DIEKNGVSDFDEGQWRSFYKSIFDNVSSFTN 67
Query: 68 LTFEETSIHSDIKFISSNNGYV----CTPRYDSRYFMEINFDKADVWRY-----GIGKGT 118
L F ETS F S G + + + Y N + V R+ +
Sbjct: 68 LDFRETS------FAESTLGQILEVGGGGQSSNPYPELPNGNTYTVVRFFGTVASASESI 121
Query: 119 ILSH---NALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSY----FMP 168
HEIGH+LGL HP G D D + S L +VMSY +
Sbjct: 122 YRGQWSSVWYHEIGHSLGLAHPFEQPGVIAGVRSDADLGTNFINSSLYTVMSYSSFVWGE 181
Query: 169 QDSMMDAS-------FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
+ A + M DI A+Q +YGA + GN +Y + + T
Sbjct: 182 DNPWTRAQDAGRTFMNASAGSYMPIDIAALQHLYGAKAANTGNTVYTFGDDLRTNAGFNT 241
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESV 271
I+D+GG+D + G + IDL + S+ IA IE+
Sbjct: 242 IWDTGGNDTIRYA--GSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETA 299
Query: 272 VGSS------------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+G S GND + G + N+V +G+D DG G+D + S
Sbjct: 300 IGGSKDDILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQS 359
Query: 314 YLYKIY----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
Y I A V D L+ +E L F D + S V
Sbjct: 360 RDYAIVYDASTTAGAFAVKHIATGALDTLASIETLVFDDTALGSQGV 406
>gi|163852635|ref|YP_001640678.1| hypothetical protein Mext_3220 [Methylobacterium extorquens PA1]
gi|163664240|gb|ABY31607.1| hypothetical protein Mext_3220 [Methylobacterium extorquens PA1]
Length = 713
Score = 187 bits (475), Expect = 5e-45, Method: Composition-based stats.
Identities = 84/401 (20%), Positives = 134/401 (33%), Gaps = 57/401 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD 67
+ + + ++ W + Y V +++ + + + S +
Sbjct: 10 SDSSLVNAVITRYKWGENTLNYGFKVQ--DIDKNGVSDFDEGQWRSFYKSIFDNVSSFTN 67
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL------S 121
L F ETS G N + + + S
Sbjct: 68 LDFRETSFEESTLGQILEVGGGGQSSNPYPELPNGNTYTVVRFFGSVASASESIYRGQWS 127
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSY----FMPQDSMMD 174
HEIGH+LGL HP G D D + S L +VMSY + +
Sbjct: 128 SVWYHEIGHSLGLAHPFEQPGVIAGVRSDADLGTNFINSSLYTVMSYSSFVWGEDNPWTR 187
Query: 175 AS-------FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
A + M DI A+Q +YGA + G+ +Y + + TI+D+GG
Sbjct: 188 AQDAGRTFMNASAGSYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTGG 247
Query: 228 DDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSS-- 275
+D + +G + IDL + S+ + IA IE+ +G S
Sbjct: 248 NDTIRY--VGSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGLLIANGVAIETAIGGSKD 305
Query: 276 ----------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
GND + G + N+V +G+D DG G+D + S Y I
Sbjct: 306 DILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQSRDYAIV 365
Query: 320 ----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
A V D L+ +E L F D + S V
Sbjct: 366 YDASTTAGAFAVKHIATGALDTLASIETLVFDDTALGSQGV 406
>gi|227819048|ref|YP_002823019.1| protease [Sinorhizobium fredii NGR234]
gi|227338047|gb|ACP22266.1| possible protease [Sinorhizobium fredii NGR234]
Length = 551
Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats.
Identities = 93/442 (21%), Positives = 142/442 (32%), Gaps = 86/442 (19%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF--------DITELNPNAQEVARWALG 60
T D +L D W+ + + N AR A
Sbjct: 10 TGNAYIDGILGDWKWAVSDFTFSFPASASFYGYGYGSGEPLKGFATFNAAQMTAARAAFD 69
Query: 61 EWSKVVDLTFEE----TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG- 115
+++ V ++T E + H D++ SS+ P YF + D W
Sbjct: 70 QFASVANVTLTEITESATKHGDLRLASSDA-----PSTAWAYFPSTAAEGGDAWFDKSSG 124
Query: 116 ------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-- 167
KG LHEIGHALGL H N DS +VMSY
Sbjct: 125 YYSRPVKGNYAYTTFLHEIGHALGLEHAHEGNVMPAN--------RDSMEYTVMSYRSYV 176
Query: 168 ---PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE------------- 210
+ ++G+ + M+ DI A+Q +YGA N Y
Sbjct: 177 GASTTTGYTNETWGFAQSLMMYDIAAIQHMYGADFTTHSENTTYCWNQATGEMSINGVAQ 236
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------------- 257
+ + T++D GG D D + +DL W++ +
Sbjct: 237 GAPGGNKILLTVWDGGGIDTYDFSNYA-TALKVDLRPGEWTTTSSAQLARLRYDGSKVAV 295
Query: 258 KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF--- 308
N+ A ++IE+ G +GND + GN+A N + ++G D G G D
Sbjct: 296 GNIANALQYKGDARSLIENAKGGAGNDTITGNAAANTLWGNAGKDTLIGGDGNDNLVGGI 355
Query: 309 ------YYAPSYLYKIYRFENAIIV------YDANEHKQDFLSDVERLRFADQCIDSVNV 356
S L YR I+ ++ E D VERL +
Sbjct: 356 GADRLDGGNGSDLANYYRAAAGIVADLHSPGANSGEAAGDTYVSVERLYGSAFNDTLRGD 415
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
++L + L G D
Sbjct: 416 NLANLLNGLGGNDVLHGRDGND 437
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 55/168 (32%), Gaps = 22/168 (13%)
Query: 199 KGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLL---------DLTLIGGVKNYIDLN 246
KG GN+ + T+ G+D L D + NY
Sbjct: 316 KGGAGNDTITGNAAANTLWGNAGKDTLIGGDGNDNLVGGIGADRLDGGNGSDLANYYRAA 375
Query: 247 TESWSSIGGYEKNMTIAQHTV---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + N A +E + GS+ ND + G++ N+ GNDV G G
Sbjct: 376 AGIVADLHSPGANSGEAAGDTYVSVERLYGSAFNDTLRGDNLANLLNGLGGNDVLHGRDG 435
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYD-------ANEHKQDFLSDVERL 344
DT + + + A + +DF S V+R+
Sbjct: 436 NDTLIGGGGADRLIGGSGADTFVFQTTVQSAPAARDIIEDFASGVDRI 483
>gi|189220078|ref|YP_001940718.1| glycosyltransferase [Methylacidiphilum infernorum V4]
gi|189186936|gb|ACD84121.1| Glycosyltransferase [Methylacidiphilum infernorum V4]
Length = 1154
Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 117/325 (36%), Gaps = 58/325 (17%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYL 405
Q + + Y Y D+ + + + H+ G EGR+ FDS YL
Sbjct: 505 GQYLKILRSSLFDRAYYLGQYPDVQEA----GIDPLLHYIRHGWKEGRNPNPYFDSAYYL 560
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQ 464
+++ H+I +G KEGRNP F Y+ + +L + +
Sbjct: 561 EKNPEVKAA----GVNPLLHFIENGWKEGRNPHPDFDLDLYLETQPELRLSGVNP----- 611
Query: 465 VGKDHFSNF-GCEEG------------------RFVTFDSYLYLGSYDDLRNVFGSDRGA 505
HF EG R FD YLG Y D++ G D
Sbjct: 612 --LKHFLESVKSLEGGTAPGQGTPERGQYLKILRSSLFDKAYYLGQYPDVQEA-GID--- 665
Query: 506 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
HYI HG KEGRNP+ F + Y+ + D+ A + HF G++EGR+
Sbjct: 666 PLLHYIRHGWKEGRNPNPYFNSAYYLEKNPDVKAAGVNP-------LLHFIENGWKEGRN 718
Query: 565 --ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL---GISGMQFKSVMNLS 619
F+ YL Y D+ + HY+ +G KE R + M
Sbjct: 719 PHPDFDLRSYLERYPDVKQA----QVNPLWHYLHYGQKENRITKGKSTPPWEISPSMAPR 774
Query: 620 EKSRDKADLSLSFDHKKVDLYTDYF 644
+K+ D L D + D T
Sbjct: 775 KKALVFNDYLLVPDRRGGDFRTFQI 799
Score = 180 bits (457), Expect = 6e-43, Method: Composition-based stats.
Identities = 72/357 (20%), Positives = 107/357 (29%), Gaps = 120/357 (33%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y + Y D+ + + + H+ G EG++ FDS YL +++
Sbjct: 382 SGLFDPGYYWSCYPDVKKA----GADPLLHYVRHGWKEGKNPNPYFDSAYYLEKNPEVKA 437
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHE---------------------- 450
H+I +G KEGRNP F Y+ +
Sbjct: 438 A----GVNPLLHFIENGWKEGRNPHPDFDLDLYLETQPEVRLSGVNPLKHFLESVKSLEG 493
Query: 451 -----------------------DLINAFADAPDLVQVGKD---HFSNFGCEEGRFVT-- 482
D PD+ + G D H+ G +EGR
Sbjct: 494 GTAPGQGTPERGQYLKILRSSLFDRAYYLGQYPDVQEAGIDPLLHYIRHGWKEGRNPNPY 553
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHE------- 534
FDS YL +++ H+I +G KEGRNP F Y+ +
Sbjct: 554 FDSAYYLEKNPEVKAAG----VNPLLHFIENGWKEGRNPHPDFDLDLYLETQPELRLSGV 609
Query: 535 --------------------------------------DLINAFADAPDLVQAGKD---H 553
D PD+ +AG D H
Sbjct: 610 NPLKHFLESVKSLEGGTAPGQGTPERGQYLKILRSSLFDKAYYLGQYPDVQEAGIDPLLH 669
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
+ G++EGR+ FN YL D+ H+I +G KEGR
Sbjct: 670 YIRHGWKEGRNPNPYFNSAYYLEKNPDVKAA----GVNPLLHFIENGWKEGRNPHPD 722
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 71/226 (31%), Gaps = 68/226 (30%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
F Y + + D+ A AD H+ G +EG+ FDS YL
Sbjct: 381 ESGLFDPGYYWSCYPDVKKAGADP-------LLHYVRHGWKEGKNPNPYFDSAYYLEKNP 433
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHE------------------ 534
+++ H+I +G KEGRNP F Y+ +
Sbjct: 434 EVKAAG----VNPLLHFIENGWKEGRNPHPDFDLDLYLETQPEVRLSGVNPLKHFLESVK 489
Query: 535 ---------------------------DLINAFADAPDLVQAGKD---HFSNFGYEEGRS 564
D PD+ +AG D H+ G++EGR+
Sbjct: 490 SLEGGTAPGQGTPERGQYLKILRSSLFDRAYYLGQYPDVQEAGIDPLLHYIRHGWKEGRN 549
Query: 565 IT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
F+ YL ++ H+I +G KEGR
Sbjct: 550 PNPYFDSAYYLEKNPEVKAA----GVNPLLHFIENGWKEGRNPHPD 591
>gi|240139968|ref|YP_002964445.1| hypothetical protein MexAM1_META1p3431 [Methylobacterium extorquens
AM1]
gi|240009942|gb|ACS41168.1| conserved hypothetical protein, putative protease-like protein
[Methylobacterium extorquens AM1]
Length = 713
Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats.
Identities = 86/411 (20%), Positives = 136/411 (33%), Gaps = 57/411 (13%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD 67
+ + + ++ W + Y V +++ + + + S +
Sbjct: 10 SDSSLVNAVITRYKWGENTLNYGFKVQ--DIDKNGVSDFDEGQWRSFYKSIFDNVSSFTN 67
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL------S 121
L F ETS G N + + + S
Sbjct: 68 LDFRETSFEESTLGQILEVGGGGQSSNPYPELPNGNTYTVVRFFGSVASASESIYRGQWS 127
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSYFM----------- 167
HEIGH+LGL HP G D D + S L +VMSY
Sbjct: 128 SVWYHEIGHSLGLAHPFEQPGVIAGVRSDADLGTNFINSSLYTVMSYSSFVWGEDNPWTR 187
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
QD+ + M DI A+Q +YGA + G+ +Y + + TI+D+GG
Sbjct: 188 TQDAGRTFMNASAGSYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTGG 247
Query: 228 DDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSS-- 275
+D + +G + IDL + S+ IA IE+ +G S
Sbjct: 248 NDTIRY--VGSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETAIGGSKD 305
Query: 276 ----------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
GND + G + N+V +G+D DG G+D + S Y I
Sbjct: 306 DILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQSRDYAIV 365
Query: 320 ----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
A V D L+ +E L F D ++S V + A
Sbjct: 366 YDASTTAGAFAVKHIATGALDTLASIETLVFDDTALESQGVFTHLEARFGA 416
>gi|186684725|ref|YP_001867921.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
gi|186467177|gb|ACC82978.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
Length = 522
Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats.
Identities = 84/370 (22%), Positives = 133/370 (35%), Gaps = 40/370 (10%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIH---SDIKFISSNNGYVCTPRYDSRYFMEINFD 105
P ++ AL W+ V ++ F + + + + F + NN + + N
Sbjct: 68 PEGKDSLIKALDAWAAVANIQFVDAGDNKESATLGFYNLNNADLGDYLFGEFSPPGENGQ 127
Query: 106 K-------ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-------VDN 151
A GT+ +HE+GH LGL HP GG P+Y
Sbjct: 128 GIGYFNREALGGNVAGAPGTLNFAVLIHELGHGLGLAHPHDNGGGSPIYPGVTSPFRSLG 187
Query: 152 DYENDSFLTSVMSYFMP----QDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNI 206
+ + + + MSY + +G +TPM DI A+Q +YG GN+
Sbjct: 188 NLGLNQGIYTTMSYNSGFYSQNGNQEKLGYGLESTPMAFDIAAIQYLYGPNNSYKTGNDT 247
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-------------SSI 253
Y + + I+D+GG D ++ + IDLN S SS
Sbjct: 248 YYLPSVNQSGTSYSCIWDAGGVDTING-ISAQSDVTIDLNDASLNTAQDGAGAGGYVSSA 306
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G TIA VIE+ GS+ ND +IGN +N + GND DG +G DT +
Sbjct: 307 KGIFGGFTIANSVVIENATGSNFNDQIIGNEFSNSLVGNDGNDTIDGGAGSDTINGGNGN 366
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYED 370
I R + + + + L AD+ + + D
Sbjct: 367 DRL-IGRAGSDRLTGGTGNDVLIGGAGNDVLLGGTGADRFLYDTEGAFARADVGQDTISD 425
Query: 371 LIQVIGQDVF 380
+ G +
Sbjct: 426 FNRSQGDKIV 435
>gi|89067540|ref|ZP_01155053.1| Possible Zn-dependent metalloprotease [Oceanicola granulosus
HTCC2516]
gi|89047109|gb|EAR53163.1| Possible Zn-dependent metalloprotease [Oceanicola granulosus
HTCC2516]
Length = 560
Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats.
Identities = 79/348 (22%), Positives = 127/348 (36%), Gaps = 42/348 (12%)
Query: 2 HNIKPVYTTERIADHLLRDQYWSN--------YFIRYKPDVLTTHRLSFDITELNPNAQE 53
+ +P T + D L+ WS+ ++ + + ++
Sbjct: 10 VDGRPTGGTNPLIDSLVWGGAWSDEEDGPVTVSYMFQSGRDPYAYFSDRPGYRWFDHEKD 69
Query: 54 VARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRY--------FMEIN 103
R A W V D+ FEE +DI + + + + + N
Sbjct: 70 AVRDAFAAWEAVADIRFEEVDDPERADIWYWIGDGSQMGSTLGWHEVPGEAVEPLYGAFN 129
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS---------YNGGYPVYGVDNDYE 154
+ G+ G LHEIGH LGL HP + G + ++
Sbjct: 130 WQGFGWDDRGLKPGGYGFITVLHEIGHGLGLAHPHDGGYAEDATTFPGVSAPFADYGRHD 189
Query: 155 NDSFLTSVMSYFMPQDSMMDASF----GYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKI 209
+ + + M+Y + ++ G+ ATPM DI A Q+IYGA G ++Y +
Sbjct: 190 LNQGIWTTMTYNDGWATKFPEAWSETHGWQATPMALDIAAAQEIYGANMDHATGRDVYTL 249
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT---------ESWSSIGGYEKNM 260
K I+D+GG D + G IDL+ S + G +
Sbjct: 250 PADNKRGTGYTCIWDAGGIDKISHRG-GEEAAIIDLDDAPLTGRHAGGYVSYVKGVIGGV 308
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
TIA VIE+ +G D + GN A+N+ G+D GS G D F
Sbjct: 309 TIANGVVIENAIGGRAGDRIRGNEAHNMLDGRGGDDHISGSRGDDRMF 356
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 44/162 (27%), Gaps = 19/162 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSG 303
+ G + + G SG+D V GN ++V G+D G G
Sbjct: 391 MSGMSGADVLRGGKGDDKAQGGSGDDTVRGNGGDDVVRGGRGDDRVYGGQGADDIWGGGG 450
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA----------DQCIDS 353
D + DA + F S + + + +Q +D
Sbjct: 451 ADKLYGGHDDARDTFLFRGKKQSEADAPDRIYRFESGTDVIDLSRIDADPSLGGNQALDW 510
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ + + ++V + F GR
Sbjct: 511 SGKGPAAASVWLEDHGRHVRVFADVNGDGEADFALRVFGVGR 552
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 29/73 (39%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+A + V G SG+D + G S +V G+D G SG DT + + R
Sbjct: 373 VAGGRGDDEVWGQSGHDRMSGMSGADVLRGGKGDDKAQGGSGDDTVRGNGGDDVVRGGRG 432
Query: 322 ENAIIVYDANEHK 334
++ + +
Sbjct: 433 DDRVYGGQGADDI 445
>gi|325982056|ref|YP_004294458.1| Serralysin [Nitrosomonas sp. AL212]
gi|325531575|gb|ADZ26296.1| Serralysin [Nitrosomonas sp. AL212]
Length = 477
Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 147/438 (33%), Gaps = 60/438 (13%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELN---------PNAQEVARWALGEWSKVVD 67
LL +W++ + V + ++ + P + ++ + +
Sbjct: 20 LLWGSHWNDPIAGTRLKVYIAGQGENEVFDFGGRAVTAHTVPQEITAFQKSIQFIENICN 79
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG-------------- 113
+ F + +D I G V R G
Sbjct: 80 IDFMIANSQADADIIVGVVGNSDAGGSLGTSVPPGEDVGPVVNRQGAVILNRDAYYSTDY 139
Query: 114 --IGKGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVM 163
+ G +HE+GHA+GL HP + G +G D+ + L ++M
Sbjct: 140 SSLQPGGYDFTTFIHELGHAVGLKHPHDSGGDGRPNFPGVTAPFGDYGDFNLNQGLYTMM 199
Query: 164 SYFMPQDSMMD--------ASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQK 214
SY + + + +GY TPM DI A+Q +YG+ GNN+Y +
Sbjct: 200 SYNDGWPAGPNGPLDPVSISGYGYEGTPMAFDIAALQFLYGSNTNFQTGNNVYTLGSTNA 259
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQ 264
F I+D+ G D + + + IDL + SS+ G TIA
Sbjct: 260 SGTFYSAIWDTKGIDTIR--NPSAIDSTIDLRGATLLHAAGGGGYLSSVDGINGGFTIAN 317
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E+ +G SG D +IGN N ++GND +G G DT A + + +
Sbjct: 318 GVTVENAIGGSGADTIIGNRVANTLTGNAGNDRINGLGGADTIIGGAGADMLAGGGGADD 377
Query: 325 I--IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + + D + D D + +++ + G
Sbjct: 378 FTYVAVNDSSGQPDIIKDF-VHALDDIDVAAIDANGADAGNPAFIFRGNAAFTGAGAEVR 436
Query: 383 MKHFYEFGLSEGRDITFD 400
F + ++ FD
Sbjct: 437 ---FVKNATHNVTNVLFD 451
>gi|254469098|ref|ZP_05082503.1| Bacterial pre-peptidase C-terminal domain family protein
[Pseudovibrio sp. JE062]
gi|211960933|gb|EEA96128.1| Bacterial pre-peptidase C-terminal domain family protein
[Pseudovibrio sp. JE062]
Length = 1111
Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats.
Identities = 83/359 (23%), Positives = 139/359 (38%), Gaps = 45/359 (12%)
Query: 35 LTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSI---HSDIKFISSNNGYV 89
+ L ++T LN P + A AL WS V L FE D+ ++ + +
Sbjct: 45 IAAQPLVINVTGLNDYPEYKAAAIGALEVWSAVTPLQFEIVDDAPYDPDLHWMEVVSPAI 104
Query: 90 C----TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+ S + I D G + + +HE GH GL HPG YN P
Sbjct: 105 GEQSDGSAFSSNRKVSIGQKFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGP 164
Query: 146 -----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI------ 194
Y + + D SVMSYF D + + + +TP+++DI + +
Sbjct: 165 GGVQINYLNNATWIYDRQQYSVMSYFDGID-VGETTRWSASTPLMADIESTIRRFFSEVD 223
Query: 195 ------YGAPKGSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLIGGV 239
Y + G+NIY + TI+D+GG D +D +
Sbjct: 224 EDGVRTYQKIDLNTGDNIYGFNSTEYGYELTSDGMQHDIGFTIHDTGGMDTIDFSG-STA 282
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIGNSANNVFFES 292
+DL +SS+ G+ N++I IE +GS+ +D++IGN +NV
Sbjct: 283 GTILDLRAGQFSSVNGHSNNVSIFAGHNEDQTEYYIEKGIGSNYDDIIIGNDGDNVLDGR 342
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIY-RFENAIIVYDANEHKQDFLSDVERLRFADQC 350
G D G +G D +F + + + N I+ ++ + +VE + +
Sbjct: 343 GGADKMAGGAGDDIYFVDSIDDIVREEADGGNDTIIVVNSDLDLGEVENVENIIYVGGT 401
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 57/173 (32%), Gaps = 12/173 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI--------ESVVGSSGND 278
G D + + +DL + S + + T I E+VVGS +D
Sbjct: 634 GIDTVVYSG-SSDGVTVDLANGTASGGDADGPVQIVGRGTTIKHDIIVDVENVVGSFYDD 692
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DF 337
+IGN N +GNDV G G D A S + + + A + D
Sbjct: 693 HLIGNDQTNELSGGAGNDVLTGGEGADVLNGGAGSDTADYSDATSGVKLNLARGKSEGDT 752
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+E L + K + L + L G D+ F + G
Sbjct: 753 YISIENLSGSGHNDKIKGNKAANTLTGQGGNDVLRGGGGDDIL--FGDFADQG 803
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 41/121 (33%), Gaps = 15/121 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D D + ++L E + I+ IE++ GS ND + GN
Sbjct: 724 GAGSDTADYSDAT-SGVKLNLARG------KSEGDTYIS----IENLSGSGHNDKIKGNK 772
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR----FENAIIVYDANEHKQDFLSD 340
A N GNDV G G D F I R A + DA + D
Sbjct: 773 AANTLTGQGGNDVLRGGGGDDILFGDFADQGEAIPRPGMGTGYATLGPDATNNSIATAFD 832
Query: 341 V 341
+
Sbjct: 833 I 833
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 61/202 (30%), Gaps = 42/202 (20%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNT-----ESWSSIGGYEKNMTIAQHTVIESVVGSSGND- 278
G D +D + + ++L T + S Y I I+ +G+ N+
Sbjct: 524 GDGVDTVDFSHESPFQLLVNLETNVAVGGTASGDTFYSIENLIGSDDRIDRFIGTDDNNH 583
Query: 279 --------------------------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
++ G+ N++ SG D +G G+DT Y
Sbjct: 584 FWGQGGGDVFNGGGGDDILDGGRDGDLLYGDEGNDILIGGSGQDYMNGGEGIDTVVYSGS 643
Query: 313 SYLYKIYRFENAIIVYDANEHKQ----------DFLSDVERLRFADQCIDSVNVKQRSIL 362
S + DA+ Q D + DVE + + + Q + L
Sbjct: 644 SDGVTVDLANGTASGGDADGPVQIVGRGTTIKHDIIVDVENVVGSFYDDHLIGNDQTNEL 703
Query: 363 EYTASYEDLIQVIGQDVFESMK 384
A + L G DV
Sbjct: 704 SGGAGNDVLTGGEGADVLNGGA 725
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 18/55 (32%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
G + N+ + +G+D DG G D ++ V + D
Sbjct: 976 GEAGNDKLYGGNGSDFLDGGLGADLLVGGKGEDTFRFSTELGEDNVDRIKDFNTD 1030
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G +GND + G + ++ G D+ G G DTF + + R ++ D
Sbjct: 976 GEAGNDKLYGGNGSDFLDGGLGADLLVGGKGEDTFRFSTELGEDNVDRIKDFNTDEDV 1033
Score = 40.9 bits (94), Expect = 0.70, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 15/150 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+ I+ ++ GG D L I + +L ++ S + N +
Sbjct: 439 GDTIFGLDGDDLII---------GGRDTLASRDINNTIPFDELEDQTESD----DGNDVL 485
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G +G+D++ G ++ +G DVF G G+DT + S + E
Sbjct: 486 YGGGGNDTIFGGAGDDILDGGDGDDTLMGQAGADVFRGGDGVDTVDFSHESPFQLLVNLE 545
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ V D +E L +D ID
Sbjct: 546 TNVAVGGTASG--DTFYSIENLIGSDDRID 573
>gi|85372717|gb|ABC70165.1| cold adapted lipase [Janthinobacterium sp. PI12]
Length = 260
Score = 183 bits (463), Expect = 1e-43, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE---------VQ 212
MSY+ Q++ D Y + P++ DI A+QK+YGA + G+ +Y
Sbjct: 1 MSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSAT 60
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
S + +++D+GG+D LD + I+LN ++ S +GG + N++IA +E+ +
Sbjct: 61 SSSSKLVFSVWDAGGNDTLDFSGFS-QNQKINLNEKALSDVGGLKGNVSIAAGVTVENAI 119
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G SG+D++IGN NV +GND+ G G D + A + + A A +
Sbjct: 120 GGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGAD--TFVYGDIAESSAAAPD 177
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+DF+S +++ D V +L+Y +
Sbjct: 178 TLRDFVSGQDKI---DLSGLDAFVNGGLVLQYVDA 209
>gi|254413957|ref|ZP_05027725.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179093|gb|EDX74089.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 665
Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats.
Identities = 95/375 (25%), Positives = 143/375 (38%), Gaps = 65/375 (17%)
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFIS-SNNGYVCTPRYDSRYFMEINFDKADVWRY 112
+ R A+ +W V ++ F +++F S G + + +Y+ +++ ++ +
Sbjct: 1 MVREAINQWKYVANIDFHRVDKGGNLRFSGESGKGGLASYKYNRKWWNPFSWGSDKLNHV 60
Query: 113 GI--------GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
I G G A+HEIGHALGL HPG+YNG Y D+ +VMS
Sbjct: 61 NIKLGKQSENGIGARFLDVAIHEIGHALGLKHPGNYNGDKKGKSPFLSYSQDNNTNTVMS 120
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK---------- 214
Y Y ATPM DI AVQ +YGA + GN YK
Sbjct: 121 YND--------VGSYAATPMPYDIRAVQYLYGARSFNSGNTTYKFSSVNSYWDGSRHRGR 172
Query: 215 -DSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTES---------------------- 249
+ P ++DS G D +L+ +G +N +ID+N
Sbjct: 173 SNKPMKLAVWDSAGVDTFNLSKLGYSRNGYHIDINQGGIITYQDEYNQRTYKAQDNSKDR 232
Query: 250 --WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG---------NDVF 298
W + + TIA IE+VVGSS +D +IGNS+ NV G ND
Sbjct: 233 KDWETHKTSPRGTTIAYGARIENVVGSSSDDKIIGNSSANVLRGGRGDDDIKGNSNNDTL 292
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G +G D + + S N + + + D S +RL + D
Sbjct: 293 YGDAGNDRLYGGSGSDRLD-GGSGNDRLYGGSGSDRLDGGSGNDRL-YGDSSSRFSFFSG 350
Query: 359 RSILEYTASYEDLIQ 373
L + L
Sbjct: 351 SDYLHGGLGNDSLYG 365
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 12/136 (8%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN------ 246
++YG N + S + + D+ GD +++ + G + +N
Sbjct: 496 RMYGGSGNDYLNGGTGSDRMSGGSGNDRYVVDNVGDRIVEYSNHGTDQVSSSINYTLGDH 555
Query: 247 ------TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
T S G N +I + + + GS+G+D + G S N+ ND +G
Sbjct: 556 LENLSLTGKASRGYGNALNNSIRGNNLANYIRGSAGDDYLYGYSGNDTLTGDGDNDYLNG 615
Query: 301 SSGLDTFFYYAPSYLY 316
+G D+ + + + Y
Sbjct: 616 GTGSDSMYGGSGNDRY 631
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T S G N I + + + GS+G+D + G N+ ND +G +G D
Sbjct: 437 TGKASRGYGNALNNRIRGNNLANYIRGSAGDDRLYGYGGNDTLKGDGDNDYLNGGTGSDR 496
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + + N+ + +++ D V+ L
Sbjct: 497 MYGGSGNDYLNGGTGSDRMSGGSGNDRYVVDNVGDRIVEYSNHGTDQVSSSINYTLGDHL 556
Query: 367 SYEDLIQVIGQDVFESMK 384
L + ++
Sbjct: 557 ENLSLTGKASRGYGNALN 574
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 25/160 (15%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNT 247
YG G+ +Y G+D L+ ++ G Y+ N
Sbjct: 473 YGGNDTLKGD---GDNDYLNGGTGSDRMYGGSGNDYLNGGTGSDRMSGGSGNDRYVVDNV 529
Query: 248 E----SWSSIGGYEKNMTIAQ--HTVIESV---------VGSSGNDVVIGNSANNVFFES 292
+S+ G + + +I +E++ G++ N+ + GN+ N S
Sbjct: 530 GDRIVEYSNHGTDQVSSSINYTLGDHLENLSLTGKASRGYGNALNNSIRGNNLANYIRGS 589
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+G+D G SG DT + +++ N+
Sbjct: 590 AGDDYLYGYSGNDTLTGDGDNDYLNGGTGSDSMYGGSGND 629
>gi|254470859|ref|ZP_05084262.1| hypothetical protein PJE062_2767 [Pseudovibrio sp. JE062]
gi|211960001|gb|EEA95198.1| hypothetical protein PJE062_2767 [Pseudovibrio sp. JE062]
Length = 1398
Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats.
Identities = 99/412 (24%), Positives = 150/412 (36%), Gaps = 65/412 (15%)
Query: 58 ALGEWSKVVDLTFEETSI-HSDIKFISSNNG--YVCTPRYDSRYFMEINFDKADVWRYGI 114
A V + F +T+ +D F ++ G + Y + ++ A +
Sbjct: 63 AFEYIESVTGIEFVQTTDESADFNFTNNVAGRAFAGHHNYARMADGKQTYESARINLSET 122
Query: 115 GK-------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
G + LHEIGHALGL H G YNG Y + + NDS+ S+MSYF
Sbjct: 123 GSHGSIWDENKYFAQTVLHEIGHALGLGHQGHYNGSANFY-KNATFLNDSWQNSIMSYFD 181
Query: 168 -PQDSMMDASFGYCATPMVSDIVAVQKIYG----------APKGSLGNNIYKIEVQQKDS 216
Q+ D S+ + +D++A+ K+YG LG+ +Y
Sbjct: 182 QNQNPTDDGSYAVPQSFKAADLLALDKLYGDQSYDGKTFGTKNAFLGDTVYGWNTNLSGH 241
Query: 217 PFI-------------QTIYDSGGDDLLDLTLIGGVKNYIDLN-------TESWSSIGGY 256
+ D GG+D LD++ N IDL SSIG
Sbjct: 242 DNTRMVNLARYSDQNSYALVDGGGNDTLDMSG-SRYNNRIDLRVTQADATEAYTSSIGPK 300
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
KN+ IA TVIE+ VG GND + GN A+N GND G G D F+ A +
Sbjct: 301 HKNIAIAVGTVIENAVGGRGNDHITGNYADNHLLGGVGNDKMFGLEGDDHFYLEAGNDTM 360
Query: 317 KIYRFENAIIVYD-------------ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + + ++ QD L +E + + + LE
Sbjct: 361 DGGEGSDWLHIDSGADMDIDLNRESLSSSFGQDRLISIENIDSGSGNDRIIGNDAANTLE 420
Query: 364 YTASYEDLIQVIGQDVFES--MKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ L G D+ + G + R YL + DD+
Sbjct: 421 GNDGDDTLYGNGGNDILKGGNGNDKLYGGAGDDR-------FYLDAGDDVIQ 465
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 20/179 (11%)
Query: 223 YDSGGDDLLD-------LTLIGGVKNYIDLNTESWS------------SIGGYEKNMTIA 263
Y G+D +D L + G IDLN ES S +I N I
Sbjct: 352 YLEAGNDTMDGGEGSDWLHIDSGADMDIDLNRESLSSSFGQDRLISIENIDSGSGNDRII 411
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++ G+ G+D + GN N++ +GND G +G D F+ A + + +
Sbjct: 412 GNDAANTLEGNDGDDTLYGNGGNDILKGGNGNDKLYGGAGDDRFYLDAGDDVIQGGDGND 471
Query: 324 AIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
I + D + ++ D N+ +Y E ++ G +
Sbjct: 472 IIYFDGGQDSHVDLTENTIQTEFGTDTISSIENISAGHGSDYLRGNEKDNRIRGNGGDD 530
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 53/178 (29%), Gaps = 12/178 (6%)
Query: 199 KGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN++ + I G D + + G +DL S G
Sbjct: 1187 TGGAGNDVINGDAGDDYIILGSGYDVIDGGDGRDTVTYS--GSENIKVDL-----SRTGT 1239
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + A+ + +E+V G SGNDV+IGN N G D G G D
Sbjct: 1240 QDIWIGRAKFSDVENVSGGSGNDVLIGNEGENTLTGGKGADTLQGGGGSDAIMIRNDDET 1299
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I A D E + D N + S + +
Sbjct: 1300 DTIVYTSVADSNSDTGHDLIIGFEGGEDIF--DFSQIDANTNAAGEQAFIFSDDSAAE 1355
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 5/154 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D+LD GG+ N I L ++ G + T+ + + G SG+D++
Sbjct: 799 GAGVDMLD----GGIGNDILLGGAGSDTLMGGAGDDTLDGGADNDMLEGGSGDDILRAGH 854
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ SGND DG + D + + + + +A + D + + L
Sbjct: 855 GADTLKGGSGNDTLDGGADNDVLQGGSGNDVLHGGD-GADTLKGEAGNDELDGGAGNDIL 913
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ LE + L G D
Sbjct: 914 IDLEGQNILRGGDGDDYLEAGSGNSKLYGGEGDD 947
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 58/167 (34%), Gaps = 13/167 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+ L + G +IDL S E N + T IE + G +G+D + GN
Sbjct: 1092 GGEGKDSLKVDGSKGAHIDL-----SKTEAQETNYGLDTITGIEDLAGGAGDDHLSGNEQ 1146
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIYRFENAIIVYDANEHKQDF 337
N + GNDV G+ G DT A + N +I DA +
Sbjct: 1147 TNYLIGNDGNDVLSGAGGNDTLRGDAGNDTLHGGDGNDNLTGGAGNDVINGDAGDDYIIL 1206
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
S + + D +I + IG+ F ++
Sbjct: 1207 GSGYDVIDGGDGRDTVTYSGSENIKVDLSRTGTQDIWIGRAKFSDVE 1253
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 14/167 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ +L G + I ++ + G E N + +S+ G +GND++ GN N+
Sbjct: 1006 NDSLRGNDADNILISGAGHDWLYGREGNDILKAGEGNDSIDGGAGNDLLDGNVGNDRLNG 1065
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA--------------NEHKQDF 337
G+DV D +G D + + + ++++ V + + D
Sbjct: 1066 GDGDDVVDAGAGRDVITLDEGNDIIRGGEGKDSLKVDGSKGAHIDLSKTEAQETNYGLDT 1125
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ +E L +Q + L + L G D
Sbjct: 1126 ITGIEDLAGGAGDDHLSGNEQTNYLIGNDGNDVLSGAGGNDTLRGDA 1172
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 14/140 (10%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N ++ +++ G +GND + G N+ +GNDV +G +G D +
Sbjct: 1152 GNDGNDVLSGAGGNDTLRGDAGNDTLHGGDGNDNLTGGAGNDVINGDAGDDYIILGSGYD 1211
Query: 315 LYKIYRFENAIIVYDANEHKQDF--------------LSDVERLRFADQCIDSVNVKQRS 360
+ + + + K D SDVE + + + +
Sbjct: 1212 VIDGGDGRDTVTYSGSENIKVDLSRTGTQDIWIGRAKFSDVENVSGGSGNDVLIGNEGEN 1271
Query: 361 ILEYTASYEDLIQVIGQDVF 380
L + L G D
Sbjct: 1272 TLTGGKGADTLQGGGGSDAI 1291
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 5/98 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + + ++ G G+D + G ++ GND G +G DT A
Sbjct: 628 NITGGKHDDVFFGTDEANNLRGLDGDDEIDGRGGDDTLIGDGGNDKLRGGAGNDTIHGGA 687
Query: 312 PSYLYKIYRFENAIIVYDANE-----HKQDFLSDVERL 344
+ ++ + D ++ +D L E
Sbjct: 688 GNDELSDGDGDDLLYAGDGDDILIMGKGRDLLDGGEGF 725
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 8/123 (6%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--------IY 319
IE G+ G+D + G+ +N + GND G G D A + +
Sbjct: 757 IEGFEGNVGDDQLTGSELDNTLIGNGGNDTLIGLEGHDRLDGGAGVDMLDGGIGNDILLG 816
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ ++ A + D +D + L L+ + + L DV
Sbjct: 817 GAGSDTLMGGAGDDTLDGGADNDMLEGGSGDDILRAGHGADTLKGGSGNDTLDGGADNDV 876
Query: 380 FES 382
+
Sbjct: 877 LQG 879
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 66/191 (34%), Gaps = 21/191 (10%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSG 276
T+ G+D LD GG N + L S + + G + T+ + + G +G
Sbjct: 855 GADTLKGGSGNDTLD----GGADNDV-LQGGSGNDVLHGGDGADTLKGEAGNDELDGGAG 909
Query: 277 NDVVI---------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
ND++I G ++ SGN G G DT + + +IV
Sbjct: 910 NDILIDLEGQNILRGGDGDDYLEAGSGNSKLYGGEGDDTLVLSGGNETIHGGEGIDHLIV 969
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV-FESMKHF 386
D D + I ++ V + AS + L ++ H
Sbjct: 970 KDDRRINVDLAKTWRQ----GTTIGTLEVSGVENITSGASNDSLRGNDADNILISGAGHD 1025
Query: 387 YEFGLSEGRDI 397
+ +G EG DI
Sbjct: 1026 WLYG-REGNDI 1035
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 12/186 (6%)
Query: 216 SPFIQTIYDSGGDD----------LLDLTLIGGVKNYID-LNTESWSSIGGYEKNMTIAQ 264
S +TI+ G D +DL I L +I N ++
Sbjct: 952 SGGNETIHGGEGIDHLIVKDDRRINVDLAKTWRQGTTIGTLEVSGVENITSGASNDSLRG 1011
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ ++ +G+D + G N++ GND DG +G D + +
Sbjct: 1012 NDADNILISGAGHDWLYGREGNDILKAGEGNDSIDGGAGNDLLDGNVGNDRLNGGD-GDD 1070
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ A + +R + + + E G D ++
Sbjct: 1071 VVDAGAGRDVITLDEGNDIIRGGEGKDSLKVDGSKGAHIDLSKTEAQETNYGLDTITGIE 1130
Query: 385 HFYEFG 390
Sbjct: 1131 DLAGGA 1136
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 56/189 (29%), Gaps = 28/189 (14%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
N + E I+ I G D L N I G + I
Sbjct: 488 NTIQTEFGTDTISSIENISAGHGSDYLRG---NEKDNRI----------RGNGGDDVIKG 534
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + GS GND + G S ++ E +GND+ +G G D + +
Sbjct: 535 EAGDDYLSGSYGNDELYGGSGSDTLVEGAGNDLVEGGDGDDRVYLGDGDDTIDGGAGNDR 594
Query: 325 IIVYDANEH---------------KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + + D +S++E + + + L +
Sbjct: 595 ISIGGGKKGARIDLAETGIQNTSYGMDKISNIENITGGKHDDVFFGTDEANNLRGLDGDD 654
Query: 370 DLIQVIGQD 378
++ G D
Sbjct: 655 EIDGRGGDD 663
>gi|317447650|emb|CBJ55056.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 245
Score = 181 bits (458), Expect = 5e-43, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 34/234 (14%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP ++ ++ ADHLLR+ + + H +S ++ +
Sbjct: 12 VNGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGIS-GFSQFS 70
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYF- 99
+ A A+ W+ V ++TF E + D N + P + +Y
Sbjct: 71 NLQKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHT 130
Query: 100 ------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDND 152
+ + G HEIGH LGL HPG YN G D D
Sbjct: 131 SGTDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDAD 190
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSL 202
Y D+ SVMSY+ ++ + + G Y + P++ DI A+Q +YG+ +
Sbjct: 191 YGQDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIXDIAAIQXLYGSNYNTR 244
>gi|329848979|ref|ZP_08264007.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844042|gb|EGF93611.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1192
Score = 180 bits (457), Expect = 5e-43, Method: Composition-based stats.
Identities = 96/494 (19%), Positives = 165/494 (33%), Gaps = 86/494 (17%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
++ ++ D +L W++ + + D N + AR+A
Sbjct: 18 FSGDQSIDAVLIGSRWTDTDLTFSFPSSGAYYDTPYYDSGYLADHVVFNTVQKGAARYAF 77
Query: 60 GEWSKVVDLTFEET----SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
+ LTF E + H+ I+ +N+ + F N DVW
Sbjct: 78 ALIAGYSLLTFNEVTETEATHATIRLSQTNDASL---EAAEGNFPGSNRWDGDVWLGLTD 134
Query: 116 K--------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD-------------NDYE 154
+ G LHEIGH +GL H S Y + D D
Sbjct: 135 QPFYLTPQVGNWGMTTILHEIGHTMGLKHGHSDYTTYDLTDDDYVDKPGPRFGTRALDAA 194
Query: 155 NDSFLTSVMSYFMPQDSMMDAS---FGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIE 210
D++ SVM+Y D F T M +DI A+Q +YGA G + GN Y +
Sbjct: 195 EDNWAHSVMTYRSASGYDTDFQGDEFNQPQTYMQNDIAALQYLYGANFGFNSGNTTYTFD 254
Query: 211 VQQKD------------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + +T++D G D + + IDLN +WS+
Sbjct: 255 IGTGEMFVDGVGQGTPELNVFGKGLIFRTVWDGNGVDTYNFSNF-YTHQSIDLNPGAWST 313
Query: 253 IGGYE----------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFF 290
+ N+ A ++IE+ G SG+D ++GN A N
Sbjct: 314 MSSGNLVDLRPKDDSEDPLAPGNLANALLFEGDTRSLIENAKGGSGHDTIVGNQAANTLD 373
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ G+D +G +G D + ++ + D + S + L D
Sbjct: 374 GNGGSDTINGGTGNDWLYGDTGLDTLNGGSGDDDVFGGDGKDALYG-ASGNDFLNGDDDD 432
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFD--SYLYLG 406
+ L A + L+ G D V + + + G D+ + S
Sbjct: 433 DQLLGEAGNDYLNGGAGSDILVGSTGNDTYVVDDIGDYLFEAAGGGSDLVYAYVSETLAA 492
Query: 407 SYDDLRNVFGSDRG 420
+++ L + G +
Sbjct: 493 NFEQLTLLGGGNID 506
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 79/252 (31%), Gaps = 46/252 (18%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFI--QTIYDSG--------GDDLLDLTLIGGVKNYI 243
+YG + I+ SG G+D + L G+ +
Sbjct: 651 LYGGDGHDTLDTGVAESNDNFADGGAGDDAIWSSGEGTYAGGLGNDYIRAGLTAGLAEVL 710
Query: 244 D-------LNTESWS-----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L+T S+ ++ ++ E V GND VIG A+N
Sbjct: 711 DGGEGLDTLDTTSYQLDYVLNLSTGLTHIAFEDFDNFEHAVLGGGNDSVIGTDASNNIST 770
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND DG +G DT A +Y + + +I N D + A + +
Sbjct: 771 GMGNDSVDGGAGADTLTGGAGDDIYVVDSSADHVIETTGN--GNDVIRSSVSYSLAGRVV 828
Query: 352 DSVNVKQRS--------------------ILEYTASYEDLIQVIGQDV--FESMKHFYEF 389
+++ + + +L+ + + L +G D +
Sbjct: 829 ETLTLTGNANINATGNGNGNRLNGNAGNNVLDGSIGNDTLTGGLGNDSYYVSTAGDSVVE 888
Query: 390 GLSEGRDITFDS 401
EG D F +
Sbjct: 889 AAGEGTDTIFSA 900
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 14/145 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G GN+ + +D G + DL+D+TL Y +L ++++ G
Sbjct: 555 NGGTGNDTIGGAFAYGGT------WDGGTEVDLVDMTLHNWAATY-NLTVGTYATSVGTL 607
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ E+V NDVV GN+ N+ + + GND G G D+ +
Sbjct: 608 NIVNF------ENVNAGEQNDVVNGNAVANLIYGNGGNDSLVGGGGADSLYGGDGHDTLD 661
Query: 318 IYRFENAIIVYDANEHKQDFLSDVE 342
E+ D S E
Sbjct: 662 TGVAESNDNFADGGAGDDAIWSSGE 686
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 25/66 (37%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
N GNS N +SGN+V +G G DT + ++ A + D +
Sbjct: 1080 GEANIDATGNSLANQLVGNSGNNVLNGKGGADTVTGGFGADVFLFQTGSGADTINDFSAA 1139
Query: 334 KQDFLS 339
D +
Sbjct: 1140 DNDSIH 1145
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 31/102 (30%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN NNV + N++ G G DT+F + ++Y + +
Sbjct: 1014 TGNDLNNVLTGNGANNILSGGLGNDTYFVQNTGDNVVEAGGAGSDVIYSTVTYSLNGRFA 1073
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ID+ + L + L G D
Sbjct: 1074 EAIYLKGEANIDATGNSLANQLVGNSGNNVLNGKGGADTVTG 1115
>gi|27381138|ref|NP_772667.1| protease [Bradyrhizobium japonicum USDA 110]
gi|27354305|dbj|BAC51292.1| bll6027 [Bradyrhizobium japonicum USDA 110]
Length = 844
Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats.
Identities = 88/385 (22%), Positives = 137/385 (35%), Gaps = 62/385 (16%)
Query: 37 THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRY- 94
+ + Q +A+G + + + + +DI S + + Y
Sbjct: 31 SEPTTSGFASAPTQMQAAINYAIGLILGYTNASIQYAGTNGADIMVAQSPSANPTSYAYY 90
Query: 95 DSRYFMEINFDKADVWRYGIG-KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
Y + + Y + G ALHE+GHALGL H G V V
Sbjct: 91 PGNYASGGDVWFGTQYNYSLAALGNYYFTTALHELGHALGLKHSQETGG---VANVAVPS 147
Query: 154 ENDSFLTSVMSYFM----PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
+D +VMSY P + ++GY T M +DI+A+Q +YGA + G +Y
Sbjct: 148 AHDDSEYTVMSYRSYVGGPLTGYTNEAYGYPQTYMANDILALQTMYGANYTTQSGTTVYT 207
Query: 209 IEVQ-------------------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ +TI+D GG D DL+ I+LN +
Sbjct: 208 WSTATGQEFINGVGQPADNGGAGGSANRIFETIWDGGGVDTYDLSNYT-TNLSINLNPGA 266
Query: 250 ---WSSIG-GYEKNMTIAQHTV-------------IESVVGSSGNDVVIGNSANNVFFES 292
+SS+ Y N A V I++ +G SGND ++GN+ N
Sbjct: 267 SSVFSSVQLAYLGNGHYASGNVYNAYLYNNDARSYIDNAIGGSGNDTIVGNAIANTLNGG 326
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLY--------------KIYRFENAIIVYDANEHKQDFL 338
SGND G G DT A + + + + D +
Sbjct: 327 SGNDTITGGGGNDTILGGAGTDTAVYSGSRSSYSVSYNSATQTFTVTDLRGSLFDGTDTI 386
Query: 339 SDVERLRFADQCIDSVNVKQRSILE 363
+ VE +FADQ + S + LE
Sbjct: 387 TGVEYFQFADQTVASETLTGPLTLE 411
>gi|329848980|ref|ZP_08264008.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844043|gb|EGF93612.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1863
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 98/462 (21%), Positives = 156/462 (33%), Gaps = 88/462 (19%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
++ + D +L WS+ + Y + N Q R+AL
Sbjct: 135 FSGNQDIDAVLIGSKWSSTSLTYSFPTSGSFYQTPYYDSGYLTNHVVFNAAQQTATRYAL 194
Query: 60 GEWSKVVDLTFEETS----IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
G L+F E + H++++F + + + + + F + DVW G
Sbjct: 195 GLIYGYTLLSFTEVTESNTTHANLRFSQTTDSSLGSAEGN---FPGSDSWDGDVWFGQTG 251
Query: 116 K--------GTILSHNALHEIGHALGLMH-----------PGSY-NGGYPVYGVDN-DYE 154
+ G +HEIGHALGL H PG Y +G P YG D
Sbjct: 252 QPYYLTPQIGNWGQATIMHEIGHALGLKHGHSDYTGFDLAPGGYVDGPGPRYGSAALDAA 311
Query: 155 NDSFLTSVMSYFMPQDSMMDAS---FGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIE 210
+DS+ S+M+Y D F T M +DI A+Q +YGA G + GN Y
Sbjct: 312 HDSWAYSLMTYRSASGYASDFQGDQFNQPQTYMQNDIAALQYLYGAWFGFNSGNTTYSFN 371
Query: 211 VQ-----------------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-- 251
V +TI+D G D D + ++ I+L +WS
Sbjct: 372 VTTGELFVNGVGQGTPTLNGGQGKIFRTIWDGNGIDTYDFSNFTDNQS-INLAPGAWSTM 430
Query: 252 ------SIGGYEKNMTIAQ--------------HTVIESVVGSSGNDVVIGNSANNVFFE 291
+ + + +A ++IE+ G SGND + GN A N
Sbjct: 431 SAARLVDLRPLDGGVNVAPPGNLANALLYNGDLRSLIENANGGSGNDSIYGNQAGNTLQG 490
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDFLSDV---ER 343
+ G+D GS+G DT + + + + + D LS +
Sbjct: 491 NGGDDYGFGSTGNDTLYGALGNDTLDGWTDNDVAYGDGGDDLLMGYFGNDTLSGGIGNDV 550
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
L D L + + + DV
Sbjct: 551 LNGEDGNDYLEGDGGNDTLSGSTGNDSYVVREAGDVISEAAD 592
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 52/170 (30%), Gaps = 22/170 (12%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+T+ D +D TL G +D+ T + G N IA V +GND
Sbjct: 1052 ETLDGGSSTDTIDTTLWSG-DYVLDMITGLTNYAGELYINFEIA--------VTGAGNDS 1102
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
V G + N +GND DG G+DT Y + +V +A+ D +
Sbjct: 1103 VSGTAGANRIETGAGNDWLDGLGGVDTLVGGTGDDTY--VVNSASDVVVEASGEGTDTVR 1160
Query: 340 DVERLRFAD-----------QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A + L L G D
Sbjct: 1161 SSVTYTLAGINAEVLVLLGSGNYSGTGNGLSNTLYGNTGNNRLDGGTGND 1210
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 15/217 (6%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+L N +Y + + Y D + G + ++S G
Sbjct: 1524 NTLDNALYGNDGDNVLSGGTGNDSYYVQNAGDTISEASNAGTDSVFSWV--TYSIAGKQI 1581
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N+T+ V + G++ +V+ GN+ N S G+D DG +G+DT + Y
Sbjct: 1582 ENLTL-TGAVALNATGNNLANVLTGNTLANTLDGSGGHDRLDGGAGIDTLIGGTGNDTYV 1640
Query: 318 IYRFENAIIVYDAN-------EHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYE 369
+ + + ++VE L I ++L ++
Sbjct: 1641 VDDPTDTLTELAGQGADSVEAWTTYTLGAEVENLTLMGSAAISGTGNALNNVLTGNSNSN 1700
Query: 370 DLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
L +G D ++ EG D + + Y
Sbjct: 1701 ILTGGLGNDTYYIQNTGDNVVELSGEGTDTIYSTVTY 1737
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 68/196 (34%), Gaps = 23/196 (11%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++ VQ ++ + G D ++ ++ +WS G Y +
Sbjct: 1286 GGTGDDT--FYVQNAGDSVVEA--NGEGTDTVNSSV-------------TWSLAGSYVET 1328
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I + G+ + + GN+ N G+DV DG +G D Y +
Sbjct: 1329 L-ILTGAANINGTGNGQANAIYGNTGVNSLIGGGGHDVLDGGAGADVLTGNTGDDTYYVD 1387
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT--ASYEDLIQVIGQ 377
+ ++ + S V + I+S+ + + + T + + ++ G
Sbjct: 1388 NAGDNVVEANGEGTADIIYSSV-TYSLGGRYIESLLLTGSANINGTGNSLNQTIVGNTGD 1446
Query: 378 DVFESM--KHFYEFGL 391
+ + + + G
Sbjct: 1447 NTLTGLGGADYLDGGA 1462
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 8/162 (4%)
Query: 207 YKIEVQQKDSPFIQ--TIYDSGGD-DLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMT 261
Y + + D+G D D LDL I G I DL T +++ G +
Sbjct: 899 YGDGGNDTVTGIFNYTSYIDAGADVDTLDLAYITGGIPPIAFDLATGAYTDGSGSLTLLN 958
Query: 262 I---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
E+V G+ G++++ GN+ N+ G D +G SG DT S +
Sbjct: 959 FENYLGQGAAETVSGTDGDNLIEGNNGNDSISGLLGGDTLNGGSGNDTVNAGTYSAADLV 1018
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
++ + + + + ++++ +
Sbjct: 1019 DGGAGNDVITASGRGTFTGGTGNDYMYAGLGTDETLDGGSST 1060
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 12/143 (8%)
Query: 198 PKGSLGNNIY-KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----- 251
G+ + +Y T++ +GG L G IDL S +
Sbjct: 651 NGGAGDDVVYSTGYGAYYGGVGNDTVWAAGGYPELLDGGDG-----IDLLEVSTAFFDYA 705
Query: 252 -SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ N E++ +GND ++G S +N+ +GND + S G DT
Sbjct: 706 INMVTGVTNFATESFVNFENLNSGTGNDTLVGTSGDNIINAGAGNDNVNSSGGSDTVNGQ 765
Query: 311 APSYLYKIYRFENAIIVYDANEH 333
+ F N A
Sbjct: 766 HGNDYLYSDAFSNKTYDGGAGND 788
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 40/122 (32%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G I + + G+S + + GNS NN G D G G D F +
Sbjct: 1738 SLSGRYAEAIILTGSANVNATGNSLTNSLTGNSGNNTLNGKGGADNLTGDLGSDLFLFET 1797
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S + F A +++ + + + I TA+ D+
Sbjct: 1798 ASGADTVTDFSAAQNDTININAYTAGVANNGLVTQSGANVLISLGGGNVITVLTATQADV 1857
Query: 372 IQ 373
+
Sbjct: 1858 LA 1859
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 6/169 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-G 273
I T+ G+D + L + E T +E++
Sbjct: 1623 GGAGIDTLIGGTGNDTYVVDDPTDT-----LTELAGQGADSVEAWTTYTLGAEVENLTLM 1677
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S GN+ NNV +S +++ G G DT++ E +Y +
Sbjct: 1678 GSAAISGTGNALNNVLTGNSNSNILTGGLGNDTYYIQNTGDNVVELSGEGTDTIYSTVTY 1737
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ +++ + L + L G D
Sbjct: 1738 SLSGRYAEAIILTGSANVNATGNSLTNSLTGNSGNNTLNGKGGADNLTG 1786
Score = 41.3 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 11/153 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ Q ++ +D G D LD+ L ++L ++++ G
Sbjct: 783 GGAGNDTIGGGFQYGNT------WDGGADTDTLDMALHNFGPATVNLALGTYTTTNGTVN 836
Query: 259 NMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ H +E ++G++G +V+I + N+ G D G G D + +
Sbjct: 837 VLNFENYTGHNAVEIIIGTAGANVIITAAGNDDIDGGGGADTISGGDGNDFLHSSSGGVV 896
Query: 316 YKIYRFENAIIVYDANEHKQ-DFLSDVERLRFA 347
N + N D +DV+ L A
Sbjct: 897 AWYGDGGNDTVTGIFNYTSYIDAGADVDTLDLA 929
Score = 37.8 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 55/197 (27%), Gaps = 21/197 (10%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD + G N ++ N E + I ++ + ++ S N GNS N
Sbjct: 1380 GDDTYYVDNAG--DNVVEANGEGTADIIYSSVTYSLGGRYIESLLLTGSANINGTGNSLN 1437
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYL-------YKIYRFENAIIVYDANEHKQDFLS 339
++G++ G G D A Y + + D +
Sbjct: 1438 QTIVGNTGDNTLTGLGGADYLDGGAGGIDALIGGTGDDTYVNGTGDTITENASEGIDTVR 1497
Query: 340 ---------DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFY 387
++E L I+ + L L G D ++
Sbjct: 1498 SGITATLGANLEVLILTGVANINGTGNTLDNALYGNDGDNVLSGGTGNDSYYVQNAGDTI 1557
Query: 388 EFGLSEGRDITFDSYLY 404
+ G D F Y
Sbjct: 1558 SEASNAGTDSVFSWVTY 1574
>gi|227357936|ref|ZP_03842279.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
gi|227161845|gb|EEI46874.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
Length = 400
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 120/275 (43%), Gaps = 33/275 (12%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HE+GHALGL H Y + D ++ S SVM Y +P D Y T M
Sbjct: 1 MHEVGHALGLSHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTSEHADFGGLYPMTFM 55
Query: 185 VSDIVAVQKIYGAPKGSL-GNNIYKIEVQQK---------DSPFIQTIYDSGGDDLLDLT 234
+ DI+ +Q++YG + NNIY + + I+DSGG D LD +
Sbjct: 56 LLDILLLQQLYGENMTTRLENNIYGFHSNTGRAAYSLKSIEDKLVSCIWDSGGIDTLDFS 115
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L V I+LN S+S IGG N++IA T+IE+ +G SG+D +IGNSANN G
Sbjct: 116 LYT-VNQVINLNEGSFSDIGGLRSNISIAYKTIIENAIGGSGHDTIIGNSANNELIGGDG 174
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCID 352
ND G G D + + + + D+L + + D
Sbjct: 175 NDTIKGGLGNDHLYGGMGNDILY-------------GDIGNDYLYGGIGDDILHGGMGND 221
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++ + Y D ++ G D +++ +Y
Sbjct: 222 ILHGSMGNDYLYGNKGND--KLFGGDGDDTLVDYY 254
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 20/159 (12%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
G+D L D L GG+ N I + + G + N + +++V GN+ I
Sbjct: 201 GNDYLYGGIGDDILHGGMGNDILHGSMGNDYLYGNKGNDKLFGGDGDDTLVDYYGNNTFI 260
Query: 282 GNSAN-----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G N N GND+F G + + + + ++ A +
Sbjct: 261 GGKGNDLLFSISKAGRNELQGGEGNDIFYCGLGTNLLYGEQGNDTFNFLCYKGA----KS 316
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
DF ++ +++ F DQ +++ + +E + E
Sbjct: 317 YNLIFDFNTNEDKIIFVDQNYKKIDISKMKRVEQLSGNE 355
>gi|254000477|ref|YP_003052540.1| Serralysin [Methylovorus sp. SIP3-4]
gi|253987156|gb|ACT52013.1| Serralysin [Methylovorus sp. SIP3-4]
Length = 559
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 23/376 (6%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITEL--NPNAQEVARWALGEWSK 64
+ + +L+ L ++ + L N + AR AL W
Sbjct: 4 STSFDDYVTYLI-----DTEENDTASASLGKTTITVSLAGLTDNSQQEAAARHALEAWED 58
Query: 65 VVDLTFEETSIH-SDIKFISSNN---GYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTI 119
LTF + +DI + + G D+RY + N+ G+
Sbjct: 59 ATGLTFTIVTSGSADIYIGNDDALGEGAYAYEENDARYINVSENWMDGFPADEQWSVGSY 118
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
+HEIGH LGL H G YN G Y D + D+ S+MSYF + AS +
Sbjct: 119 GVQTFIHEIGHTLGLGHGGPYN-GNGSYAKDAIFALDTNQYSIMSYFDQSN-YGGASNLF 176
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKI--------EVQQKDSPFIQTIYDSGGDDLL 231
+PM++DI A++ +YG + G+ +Y + + + +TI DS G D +
Sbjct: 177 LLSPMMADIAAIRLLYGNLATNTGDTLYGLGETVLGGTSDMGSYAGYARTISDSDGTDTM 236
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + + + ID+ +SSI GY+KN IAQ T IE++ + G D V GN A+N+ +
Sbjct: 237 DFSNVS-RGSVIDMRAGGFSSINGYKKNFAIAQDTTIENLNATLGRDTVTGNDADNLIYG 295
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SGND +G DT ++ + + + + + +A
Sbjct: 296 LSGNDKISSGAGNDTLDGGLGGDTLTGGLGDDVYYINSSKDVISEKADGGTDVVYASVSY 355
Query: 352 DSVNVKQRSILEYTAS 367
+ + +L+ +AS
Sbjct: 356 TMASYLEEVVLQGSAS 371
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ K G ++ V + +++ + G + N I + + + + G
Sbjct: 339 SEKADGGTDVVYASVSYTMASYLEEVVLQGSASTKLKATGNAMANQITGDDGA-NVLNGG 397
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N T+A +++ G +GND + G AN+ +G+D G +G D A S ++
Sbjct: 398 AGNDTLAGGLGRDTLAGGTGNDSLDGGDANDKLDGGAGDDTLVGGAGNDLLKGGAGSDIF 457
Query: 317 KIYRFENAIIVYD 329
I + I+ D
Sbjct: 458 IIEDGTDHDIISD 470
>gi|329848977|ref|ZP_08264005.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844040|gb|EGF93609.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1784
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 97/497 (19%), Positives = 165/497 (33%), Gaps = 100/497 (20%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS--------FDITELNPNAQEVARWAL 59
+T + D +L W+ I + + N Q +A+
Sbjct: 157 FTGNQDIDAVLFGSRWTLSTITFSFPTSGAQYATPYYDPGYLTSHVAFNAAQQTAGEYAM 216
Query: 60 GEW--SKVVDLTFE-----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY 112
V TF + + I+ + + + + + F + D+W
Sbjct: 217 LTLMRGYVS--TFVNEIAPSLATPATIRMSQTTDASLGSAEGN---FPGSDSWDGDIWFG 271
Query: 113 GIGK--------GTILSHNALHEIGHALGLMHPGS------------YNGGYPVYGVDN- 151
G+ G +HEIGHA+GL H +G P +G
Sbjct: 272 MTGQPFYLTPQIGNWGQATIMHEIGHAMGLKHGHQDYTGFDLTVGGYLDGPGPRFGTRAL 331
Query: 152 DYENDSFLTSVMSYFMPQDSM-------MDASFGYCATPMVSDIVAVQKIYGA----PKG 200
+DS+ S+M+Y + F T M +DI A+Q +YGA P+
Sbjct: 332 PASHDSWAYSIMTYRSDPGNNPGGNPSFQGDQFNQPQTFMQNDIAALQYMYGADFTSPEA 391
Query: 201 SLGNNIYKIE-------------------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ +Y +TI+D GG D D
Sbjct: 392 HPTDTVYTFNSITGRMSINGVGQETPTFDAVNNVGKIFRTIWDGGGVDTYDFDNYT-TNQ 450
Query: 242 YIDLNTESWSSIGGYE---------------KNMTIAQ------HTVIESVVGSSGNDVV 280
IDL WS++ + N+ A ++IE+ G SGND +
Sbjct: 451 TIDLTPGGWSTMNSLQLADLRPLSATYVAAPGNIANALLYNGDLRSLIENANGGSGNDNI 510
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IGN NNV + GND G G D + A + + +++ D N+ + D
Sbjct: 511 IGNDVNNVIHGNGGNDTVFGDDGNDLLYGEAGNDTLDGWIGNDSVYGGDGNDFMYGY--D 568
Query: 341 VERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDI 397
A +D++ + + L + ++ G D V E SEG D+
Sbjct: 569 GNDFLIASTGLDTLRGESGNDYLSGGTGNDSMVGDTGNDTYVLEEAGDIVVEAASEGTDL 628
Query: 398 TFDSYLY--LGSYDDLR 412
+ + Y L ++++L
Sbjct: 629 VYAYFSYTLLANFENLT 645
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 71/232 (30%), Gaps = 27/232 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G GN+ +T+ G DLLD T I+L T
Sbjct: 841 GTYDGGTGNDT------AFAGIGNETMIGGSGTDLLDTTSWSLAY-TINLATG------- 886
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T E++ +GND + G NV +GND DG G D+ A
Sbjct: 887 -LTNFVGESFTGFENLTTGAGNDSLTGTFGVNVINGGAGNDTIDGGFGYDSLDGGAGIDT 945
Query: 316 YKIYRFENAI-------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y I F N + + + + E + A + ++
Sbjct: 946 YDISGFTNLTGATINLATGLYTDGSGSETILNFENVLGAGGDQSYFGTNGANFIDGGDGN 1005
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ + G D + G TF S YLG D G + G
Sbjct: 1006 DLIDSGGGNDTVQGGAGNDTIG-----TTTFSSRSYLGQGGDDVISGGFNYG 1052
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 69/220 (31%), Gaps = 23/220 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G LG++ + I G D L+ TL GG +DL T +
Sbjct: 1288 GTYNGGLGDD---YIYAGLTGAGAEVIDGGDGIDTLNTTLWGG-DYLVDLTTGLTDTATE 1343
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N E+++ SGND + G + N +G DV G +G DT+ +
Sbjct: 1344 DFDNF--------ENIISGSGNDTITGTAGANSIDGGAGADVLTGGAGDDTYIVDNTADD 1395
Query: 316 YKIYRFENAIIVYDANEHK-------QDFLSDVERLRFA--DQCIDSVNVKQRSILEYTA 366
+V + + L V + ++L+ A
Sbjct: 1396 VNESSGGGNDLVRASVSYSLAGMVVETLTLMGVADINATGNGNGNTLNGNSGNNVLDGAA 1455
Query: 367 SYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
+ ++ +G D EG D F + Y
Sbjct: 1456 GADTMLGGLGNDSYYVNVAGDVVTEVAGEGNDTIFTALTY 1495
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 14/144 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGV--KNYIDLNTESWSSIGG 255
G GN+ S +D G G DLLD++ + D+NT +W G
Sbjct: 1153 NGGAGNDTVGGNFGYNSS------FDGGTGVDLLDMSFVFSTLLPVTFDMNTGAWVDGIG 1206
Query: 256 YEKNMT----IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ I ES+ G+SG + + G ++ +G+D +G +G D+ A
Sbjct: 1207 PFSAVNFENYIGFSDA-ESITGTSGANSIEGGDGDDTLVGGAGSDTLNGGAGNDSINAGA 1265
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
S ++
Sbjct: 1266 LSDGTDTVNGNGGDDTIVSSGQGT 1289
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 68/180 (37%), Gaps = 19/180 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDL-----------N 246
G GN+ Q + +D G D++D+TL V Y + N
Sbjct: 702 NGGSGNDTVGGGFQYGGT------WDGSTGVDMVDMTLHNFVATYNLVTGTYTTGGGTQN 755
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ ++ ++N TI + ++ G+ GND + G ++ + +G D +G +G DT
Sbjct: 756 ILNFENVNAGDQNDTINGSDAVNALYGNGGNDSINGLGGHDALYGGAGIDTLNGGTGNDT 815
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
A + + + N +I + D + + + +L+ T+
Sbjct: 816 LLGGAGADIVN-GQDGNDVITSSGDSGTYDGGTGNDTAFAGIGNETMIGGSGTDLLDTTS 874
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 8/132 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGGYEK-----NMTIA 263
++ G D D++ I+L T ++ G E N+ A
Sbjct: 925 NDTIDGGFGYDSLDGGAGIDTYDISGFTNLTGATINLATGLYTDGSGSETILNFENVLGA 984
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S G++G + + G N++ GND G +G DT S + + +
Sbjct: 985 GGD--QSYFGTNGANFIDGGDGNDLIDSGGGNDTVQGGAGNDTIGTTTFSSRSYLGQGGD 1042
Query: 324 AIIVYDANEHKQ 335
+I N
Sbjct: 1043 DVISGGFNYGDT 1054
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 58/178 (32%), Gaps = 7/178 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S + +Y +GG+D ++ +GG ++ G N T+ +
Sbjct: 768 NDTINGSDAVNALYGNGGNDSIN--GLGGHDALY--GGAGIDTLNGGTGNDTLLGGAGAD 823
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V G GNDV+ + + + +GND G +T + + L + A +
Sbjct: 824 IVNGQDGNDVITSSGDSGTYDGGTGNDTAFAGIGNETMIGGSGTDLLDTTSWSLAYTINL 883
Query: 330 A---NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + + E L +++ A + + G D +
Sbjct: 884 ATGLTNFVGESFTGFENLTTGAGNDSLTGTFGVNVINGGAGNDTIDGGFGYDSLDGGA 941
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 26/187 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G LGN+ Y + V + T G+D + ++S G +N
Sbjct: 1462 GGLGNDSYYVNVAGD----VVTEVAGEGNDTI-------------FTALTYSLAGKQVEN 1504
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+T+ + + G+ +V+ GNSA N SG+D DG G D + Y +
Sbjct: 1505 LTLEGAAAV-NGTGNGLANVLKGNSAANTLDGGSGHDRVDGGLGADNLIGGTGNDTYVVD 1563
Query: 320 RFENAII-------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDL 371
+ + + +VE L + + + ++L ++ L
Sbjct: 1564 NAGDTVTEGAGAGGDLVESSVTYGLSLNVENLTLTGAAVINGSGNDLNNVLTGNSANNVL 1623
Query: 372 IQVIGQD 378
+G D
Sbjct: 1624 AGGLGND 1630
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 227 GDDLLDLTLIGGV-----KNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G+D + G IDL + S S+ G + G+S + +
Sbjct: 1628 GNDTYYVQNTGDNVTEVGGAGIDLIYSTVSYSLAGRYAETITLTGAANINATGNSLGNTL 1687
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GN NN GND G G D F + A S I F A
Sbjct: 1688 NGNDGNNTINGKGGNDALTGGLGADIFLFEAASGSDTIGDFSAA 1731
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 31/149 (20%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES------- 270
+ G+D + G + + + E ++T +E+
Sbjct: 1547 GADNLIGGTGNDTYVVDNAGDT-----VTEGAGAGGDLVESSVTYGLSLNVENLTLTGAA 1601
Query: 271 VVGSSGND---VVIGNSANNVFFESSGNDVFD-----------GSSGLDTFFYY-----A 311
V+ SGND V+ GNSANNV GND + G +G+D + A
Sbjct: 1602 VINGSGNDLNNVLTGNSANNVLAGGLGNDTYYVQNTGDNVTEVGGAGIDLIYSTVSYSLA 1661
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
Y I A I N +
Sbjct: 1662 GRYAETITLTGAANINATGNSLGNTLNGN 1690
>gi|329848424|ref|ZP_08263452.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843487|gb|EGF93056.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1128
Score = 178 bits (450), Expect = 4e-42, Method: Composition-based stats.
Identities = 77/451 (17%), Positives = 135/451 (29%), Gaps = 81/451 (17%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
YT ++ D L W+ I + + + N Q A +A
Sbjct: 149 YTGNQLVDGALFGSRWTVTNITFSFPTTGEFYNTPYYDPAYTAEQVPFNAAQQSAALYAF 208
Query: 60 GEWSKVVDLTFEETS----IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
S +LTF + + H I+ + + + F + D+W G
Sbjct: 209 ALISSYTNLTFTQVTESAETHGIIRMSQTTADGAGSAEGN---FPGSDASDGDIWFGQTG 265
Query: 116 K--------GTILSHNALHEIGHALGLMHPGSY------------NGGYPVYGVDN-DYE 154
+ G +HEIGH +GL H +G P +G +
Sbjct: 266 QPFYLTPQIGNWGMATMIHEIGHTMGLKHGHDSYTTFDLTVGGYLDGPGPHFGTAALPAD 325
Query: 155 NDSFLTSVMSYFMPQD---SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE 210
D + SVM+Y S F T M +DI A+Q +YGA + +++Y
Sbjct: 326 KDGWAWSVMTYRSAPGFTASFQGEQFNQPQTYMQADIAALQFMYGANFNSNATDSVYTFN 385
Query: 211 VQQKD-------------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ +TI+D G D D + ++L+ +S
Sbjct: 386 ATTGEMFINGVGQGVPEFDAVAGVGKIFRTIWDGNGTDTYDFSNFTN-NQTVNLSPGGFS 444
Query: 252 SIG---------------GYEKNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFF 290
+ N+ A ++IE+ + SGND++IGN A N
Sbjct: 445 TFSLAQLGDSRPLLAGFTAQPGNIGNALQYQGDARSLIENAITGSGNDLLIGNQATNTLT 504
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND + S D ++ + + + +D
Sbjct: 505 GGLGNDTYVVDSESDAVVEALDQGTDLVFATSSFTLGANVENLTLLTTTDATGNGNDLAN 564
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ +L + +
Sbjct: 565 VIYGGTGSYDVLNGLGGNDFIYGATDLPGAA 595
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 3/141 (2%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++ G +G+D ++G + ++ +G+D DG +G +T Y+A S +
Sbjct: 760 DGVDAMDGGAGDDTLMGVAGDDYLTGGAGDDSLDGGTGNNTASYFAASGAVTV-SLALQG 818
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESM 383
+ D L + L + +++ + +G D +S
Sbjct: 819 TAQNTIGAGTDTLVNFRNLAGSFHDDSLTGDDNANLINGQGGANTMAGGLGNDTYWIQSA 878
Query: 384 KHFYEFGLSEGRDITFDSYLY 404
G D+ Y
Sbjct: 879 GDVIIEAAGAGTDLVLSLIDY 899
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 20/170 (11%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTESWS-SIGGYEKNMTIAQHTV 267
++ G+D + +G V N DL S + ++G Y +N+T+
Sbjct: 957 GGTGNDSLIGFDGNDTYVVDAVGDVVNENEYMTGTDLVESSITYTLGAYVENLTLTGSAN 1016
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I + G +GN+V+ GNS NV +G+D Y + + NA I
Sbjct: 1017 I-NGTGHAGNNVLTGNSGTNVLTGGAGDDT-----------YVIQNAADNVVEANNAGID 1064
Query: 328 YDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ VE L AD + + + +
Sbjct: 1065 LIVSSVTYSLSGKQVENLTLADGAGNINGTGNGLANTLRGTPATICWTVA 1114
>gi|296532986|ref|ZP_06895639.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266686|gb|EFH12658.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 921
Score = 178 bits (450), Expect = 4e-42, Method: Composition-based stats.
Identities = 75/285 (26%), Positives = 111/285 (38%), Gaps = 47/285 (16%)
Query: 343 RLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
RL FAD D + Y A+Y D+ + H+ FG EG+D + F
Sbjct: 665 RLVFADGVLRDQDGDALMDGIHYAATYRDIYAA----GVDPAAHYRSFGWQEGKDPSAYF 720
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
+ Y + D+R H+ +G EGR+P A F Y + D+ A +
Sbjct: 721 STLGYRSANADVRQA----GVNPLEHFRQNGSAEGRDPSAEFDLRMYKVYNPDVAAAGLE 776
Query: 459 APDLVQVGKDHFSNFGCEEGRFV----------TFDSYLYLGSYDDLRNVFGSDRGAAAR 508
H+ FG EGR + D YL S D+ G A
Sbjct: 777 P-------LTHYLAFGAAEGRRIHAAVGDDIRGGLDLQYYLLSQPDV----GFAGVDPAA 825
Query: 509 HYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SI 565
H+ G +EGR+P+A F Y+A++ D+ A D H+ G+ EGR S
Sbjct: 826 HFRASGWREGRDPNAYFDTAGYLATYADVRAAGVDP-------LAHYMASGWREGRDPST 878
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
F+ YL + D+ QH++T G+ EGR+ G
Sbjct: 879 RFDTTAYLAANPDVAAA----GVNPLQHFLTAGLFEGRSAQADGA 919
Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 51/131 (38%), Gaps = 18/131 (13%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
+ Y S D+ G + HF G EGRD FD+ YL +Y D+R
Sbjct: 805 DLQYYLLSQPDV----GFAGVDPAAHFRASGWREGRDPNAYFDTAGYLATYADVRAA--- 857
Query: 418 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
HY+ G +EGR+P F Y+A++ D+ A + HF G
Sbjct: 858 -GVDPLAHYMASGWREGRDPSTRFDTTAYLAANPDVAAAGVNP-------LQHFLTAGLF 909
Query: 477 EGRFVTFDSYL 487
EGR D
Sbjct: 910 EGRSAQADGAW 920
>gi|308801467|ref|XP_003078047.1| unnamed protein product [Ostreococcus tauri]
gi|116056498|emb|CAL52787.1| unnamed protein product [Ostreococcus tauri]
Length = 881
Score = 178 bits (450), Expect = 4e-42, Method: Composition-based stats.
Identities = 80/369 (21%), Positives = 122/369 (33%), Gaps = 75/369 (20%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+Y K Y A I + + + I ++ + Y A Y
Sbjct: 317 FYMDDDTAKCYLNRYADIFKKFGTDLEAAKKHFHDVGQHEGRIAHCSISDADLKCYLARY 376
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDI--------------------TFDSYLYLGSY 408
EDL D HF++ G EGR + +D+ Y+ +Y
Sbjct: 377 EDLPWSQPND---GRTHFFKKGWMEGRTVKCAGDVDRYKYNFDDAELMYDYDAVCYIDNY 433
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNP--------DAFKALEYIASHEDLINAFADAP 460
DD+R FG D A HY G E R P D A+ + ++ D+ F
Sbjct: 434 DDVRKAFGFDLTKAKTHYFIKGASEKRKPICTREPVIDNLDAMCFASNFWDIHRYFGQYA 493
Query: 461 DLVQVGKD----------HFSNFGCEE----GRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
V D H ++ R D YL Y ++ +D AA
Sbjct: 494 GRVSQSTDIANIKTFMRVHHKQEARKKLSKCERVAPADFRCYLERYPEVPRSHANDIEAA 553
Query: 507 ARHYITHGVKEGRNP----------DAFKALEYIASHEDLINAFADA-PDLV-------- 547
H++ G KEG+NP A K + +D + D PD+
Sbjct: 554 RTHWLHSGWKEGKNPKCDSRPHFYRHAMKDKHWPHIRDDDAQCYLDRYPDIAKKYNHLTG 613
Query: 548 QAGKDHFSNFGYEEGRSITFNP---------DLYLTSYDDLWNVFGSDRS--AAAQHYIT 596
++ DH GR +P Y+ YDD+ + +S AA+H T
Sbjct: 614 KSKLDHAKIHYLRLGRRFRRDPTCAGPHEATKCYIARYDDVRKAYMQHKSLAKAAEHMRT 673
Query: 597 HGMKEGRAL 605
G++E R
Sbjct: 674 IGVQEERET 682
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 89/255 (34%), Gaps = 52/255 (20%)
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR----NPDAFKALEYIASHEDLINAF 456
+ YL Y D+ FG+D AA +H+ G EGR + Y+A +EDL
Sbjct: 324 AKCYLNRYADIFKKFGTDLEAAKKHFHDVGQHEGRIAHCSISDADLKCYLARYEDL---- 379
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--------------------FDSYLYLGSYDDLR 496
G+ HF G EGR V +D+ Y+ +YDD+R
Sbjct: 380 --PWSQPNDGRTHFFKKGWMEGRTVKCAGDVDRYKYNFDDAELMYDYDAVCYIDNYDDVR 437
Query: 497 NVFGSDRGAAARHYITHGVKEGRNP------------------DAFKALEYIASHEDLIN 538
FG D A HY G E R P + + Y + ++
Sbjct: 438 KAFGFDLTKAKTHYFIKGASEKRKPICTREPVIDNLDAMCFASNFWDIHRYFGQYAGRVS 497
Query: 539 AFADAPDLVQAGKDHFSNFGYEEG----RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
D ++ + H ++ R + YL Y ++ +D AA H+
Sbjct: 498 QSTDIANIKTFMRVHHKQEARKKLSKCERVAPADFRCYLERYPEVPRSHANDIEAARTHW 557
Query: 595 ITHGMKEGRALGISG 609
+ G KEG+
Sbjct: 558 LHSGWKEGKNPKCDS 572
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 73/225 (32%), Gaps = 37/225 (16%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI---------------- 397
V Y Y ++ + D+ + H+ G EG++
Sbjct: 525 ERVAPADFRCYLERYPEVPRSHANDIEAARTHWLHSGWKEGKNPKCDSRPHFYRHAMKDK 584
Query: 398 ------TFDSYLYLGSYDDLRNVFGSDRGA-----AARHYITHGVKEGRNPDAF----KA 442
D+ YL Y D+ + G A HY+ G + R+P
Sbjct: 585 HWPHIRDDDAQCYLDRYPDIAKKYNHLTGKSKLDHAKIHYLRLGRRFRRDPTCAGPHEAT 644
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR-----FVTFDSYLYLGSYDDLRN 497
YIA ++D+ A+ L + +H G +E R D Y+ Y L+
Sbjct: 645 KCYIARYDDVRKAYMQHKSLAKAA-EHMRTIGVQEERETRCALSNDDLRCYMARYPHLKT 703
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
F D A H+ + G +G +P + D I+ D
Sbjct: 704 KFDGDTALAREHFFSEGFMQGDDPKCELTKFHKTFTGDRIHGNLD 748
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGRDI-----TFDSYLYL 405
+ + Y A Y+D+ + Q ++ +H G+ E R+ D Y+
Sbjct: 636 TCAGPHEATKCYIARYDDVRKAYMQHKSLAKAAEHMRTIGVQEERETRCALSNDDLRCYM 695
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
Y L+ F D A H+ + G +G +P
Sbjct: 696 ARYPHLKTKFDGDTALAREHFFSEGFMQGDDP 727
>gi|300865764|ref|ZP_07110521.1| putative Hemolysin-type calcium-binding region protein
[Oscillatoria sp. PCC 6506]
gi|300336246|emb|CBN55674.1| putative Hemolysin-type calcium-binding region protein
[Oscillatoria sp. PCC 6506]
Length = 298
Score = 177 bits (449), Expect = 5e-42, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 22/244 (9%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
F Y+ ++ D+ A A+ V G DHF+ FG E R FD+ YL + D
Sbjct: 5 RSLFDNAFYLENNPDVGLAIANGK--VSSGFDHFNRFGKFEDRDPNILFDTSYYLETNTD 62
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ + AA H+I G E RNP+ + S+ + A L A +H+
Sbjct: 63 VAAAVEEGKITAADHFIRFGQFERRNPNPLFDTAFYGSNNPDVTAAVQRNQLTLA--EHY 120
Query: 555 SNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGRALGISGMQ 611
G E R + F+PD YL Y + + +A +HY+ G++E + + Q
Sbjct: 121 LKLGQFENRQPSLLFDPDYYLQKYPLVATAVNNGVVKSAFEHYLRFGLEE-TLVSVPPTQ 179
Query: 612 ---FKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFG---------DGNYYDSDLYSMHD 659
S +L + D + VD+Y+ DG D+D+ + D
Sbjct: 180 SEDLTSARSLGVLDGIQGVSDFVGDTEPVDIYSFLLNSPSNFSLTLDGLSADADVELLQD 239
Query: 660 INHD 663
IN D
Sbjct: 240 INRD 243
Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 10/162 (6%)
Query: 363 EYTASYEDL-IQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR 419
Y + D+ + + V HF FG E RD FD+ YL + D+ +
Sbjct: 12 FYLENNPDVGLAIANGKVSSGFDHFNRFGKFEDRDPNILFDTSYYLETNTDVAAAVEEGK 71
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
AA H+I G E RNP+ F Y +++ D+ A + +H+ G E
Sbjct: 72 ITAADHFIRFGQFERRNPNPLFDTAFYGSNNPDVTAAVQRNQLTLA---EHYLKLGQFEN 128
Query: 479 RFVT--FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKE 517
R + FD YL Y + + +A HY+ G++E
Sbjct: 129 RQPSLLFDPDYYLQKYPLVATAVNNGVVKSAFEHYLRFGLEE 170
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 5/142 (3%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + D Y + D+ + + + HF FG E R+
Sbjct: 31 SGFDHFNRFGKFEDRDPNILFDTSYYLETNTDVAAAVEEGKITAADHFIRFGQFERRNPN 90
Query: 399 --FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD+ Y + D+ ++ A HY+ G E R P F Y+ + + A
Sbjct: 91 PLFDTAFYGSNNPDVTAAVQRNQLTLAEHYLKLGQFENRQPSLLFDPDYYLQKYPLVATA 150
Query: 456 FADAPDLVQVGKDHFSNFGCEE 477
+V+ +H+ FG EE
Sbjct: 151 V--NNGVVKSAFEHYLRFGLEE 170
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 16/145 (11%)
Query: 301 SSGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVK 357
SSG D F + F+ + + D + VE ++ AD I +
Sbjct: 30 SSGFDHFNRFGKFEDRDPNILFDTSYYLETN----TDVAAAVEEGKITAADHFIRFGQFE 85
Query: 358 QRSILE------YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYD 409
+R+ Y ++ D+ + ++ +H+ + G E R + FD YL Y
Sbjct: 86 RRNPNPLFDTAFYGSNNPDVTAAVQRNQLTLAEHYLKLGQFENRQPSLLFDPDYYLQKYP 145
Query: 410 DLRNVFGSD-RGAAARHYITHGVKE 433
+ + +A HY+ G++E
Sbjct: 146 LVATAVNNGVVKSAFEHYLRFGLEE 170
>gi|329848975|ref|ZP_08264003.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844038|gb|EGF93607.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 827
Score = 176 bits (447), Expect = 8e-42, Method: Composition-based stats.
Identities = 89/452 (19%), Positives = 143/452 (31%), Gaps = 87/452 (19%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
++ + D +L W+ + + N Q AR+AL
Sbjct: 66 FSGVQDIDAVLIGSKWTVTNLTFSFPTSGAVYQTPYYDSGYLASHVAFNGAQQAGARYAL 125
Query: 60 GEWSKVVDLTFEETSIHSD--IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK- 116
G LTF E + +D S G D + ++D D+W +
Sbjct: 126 GLVDGYTLLTFSEIAETADTHANIRLSQTGDASLVTADGNFPGSDSWD-GDIWLTTSSQP 184
Query: 117 -------GTILSHNALHEIGHALGLMHPGSY------------NGGYPVYGVDN-DYEND 156
G LHEIGH+LGL H +G P YG ++D
Sbjct: 185 FYTTPQAGNWGMAVLLHEIGHSLGLKHGHEDYTTVDLTAGGYVDGPGPRYGTRALATQHD 244
Query: 157 SFLTSVMSYFMPQDSM-------MDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYK 208
S+ SVM+ ++ F T M +DI A+Q +YGA + GN IY
Sbjct: 245 SWAYSVMTARSDPNNNAGENPSFQGDGFNQPQTYMQNDIAALQYLYGADFTTQAGNTIYS 304
Query: 209 IEVQQKD-----------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ +TI+D G D D + I+L+ +WS
Sbjct: 305 FDAATGQMFINGAAQAVPTQNGGVGKIFRTIWDGNGIDTYDFSNFSN-NQTINLDPGAWS 363
Query: 252 SIGGYE----------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVF 289
++ + N+ A ++IE+ G +G D + GN N
Sbjct: 364 TMNAVQLAELRPLDAEVTVNAPGNIANALLYNNDTRSLIENANGGAGQDTISGNDGGNQL 423
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRF 346
+ GND G D A + + + ++ D L S + L
Sbjct: 424 HGNDGNDRLYAYKGDDLLSGDAGNDYLDGWSGADTLV----GGDGTDTLWGYSGNDFLSG 479
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L A + ++ G D
Sbjct: 480 GNDNDTINGEAGNDYLHGGAGADSMVGGSGND 511
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 1/127 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G+ T+ +++ G SGND + G + N+ +GND G +G D+ +
Sbjct: 450 LDGWSGADTLVGGDGTDTLWGYSGNDFLSGGNDNDTINGEAGNDYLHGGAGADSMVGGSG 509
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ Y + + I V D++ AD + V ++ S ++I
Sbjct: 510 NDTYVLDDVGD-ITVEVLWTGGNDWIYAPFSYTLADGYENLTLVGSGNLSGTGNSDYNVI 568
Query: 373 QVIGQDV 379
+ +
Sbjct: 569 RGTDGNN 575
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G I T G+S N+V+ GN NN +G D G G DT++
Sbjct: 622 SLFGRAVETLILTGTENLRATGNSLNNVLNGNFGNNRLDGGAGGDRMVGGLGNDTYYVDH 681
Query: 312 PSYLYKIYRFENAIIVYDA 330
+ V+ +
Sbjct: 682 LQDNVVEQHLQGTDTVFSS 700
>gi|302873081|ref|YP_003841714.1| hypothetical protein Clocel_0162 [Clostridium cellulovorans 743B]
gi|307688762|ref|ZP_07631208.1| hypothetical protein Ccel74_11408 [Clostridium cellulovorans 743B]
gi|302575938|gb|ADL49950.1| hypothetical protein Clocel_0162 [Clostridium cellulovorans 743B]
Length = 644
Score = 176 bits (446), Expect = 1e-41, Method: Composition-based stats.
Identities = 75/272 (27%), Positives = 106/272 (38%), Gaps = 32/272 (11%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y Y DL G D + KH+ G+ EGR + FD YL D+ G
Sbjct: 122 FDEKFYADKYPDLKTRFGYDRVKLFKHWKTSGIKEGRTFSCVFDPDYYLKHNSDVAKAVG 181
Query: 417 S-DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ + A +H+IT G EGR + + Y + DL HF +G
Sbjct: 182 ANNYEGAYQHFITSGYNEGRRSSPIYDGIYYKNCYSDLKTY------DFYKLIYHFLTYG 235
Query: 475 CEEGRFV--TFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRN--------PDA 523
EGR F+ +Y Y DL FG+ D HY+ G++EGR+ P+
Sbjct: 236 IHEGRSACLNFEPIVYAIRYPDLFKNFGNLDYKPYFTHYLISGIREGRSGLYDYNFIPNP 295
Query: 524 -----FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSY 576
F Y + DL H+ G +EGR S F+PD YL +
Sbjct: 296 IENLIFDEKFYADKYPDLKANLGYNK---AKLFMHWKTTGIKEGRTSSYVFDPDYYLKNN 352
Query: 577 DDLWNVFGSDRSA-AAQHYITHGMKEGRALGI 607
D+ G++ A +H+IT G EGR
Sbjct: 353 SDVAKAVGANNYKGAYEHFITSGYNEGRKSSP 384
Score = 166 bits (419), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 108/295 (36%), Gaps = 35/295 (11%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y Y DL +G + + H+ G+ EGR + FD YL + D+ G
Sbjct: 301 FDEKFYADKYPDLKANLGYNKAKLFMHWKTTGIKEGRTSSYVFDPDYYLKNNSDVAKAVG 360
Query: 417 SD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
++ A H+IT G EGR + Y + DL HF +G
Sbjct: 361 ANNYKGAYEHFITSGYNEGRKSSPIYHGSYYQNCYSDLKT------HDFYKLIYHFITYG 414
Query: 475 CEEGRFV--TFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRN--------PDA 523
E R F+ +Y Y DL G+ D HY+ G++EGR+ P+
Sbjct: 415 IHESRNACLNFEPIVYAIRYPDLFKALGNSDYKPYFTHYLISGIREGRSGLYDYNFIPNP 474
Query: 524 -----FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSY 576
F Y + DL F H+ G +EGR S F+P YL +
Sbjct: 475 IENLIFDEKFYADKYPDLKAKFGYDR---ARLFMHWKVSGIKEGRTSSYVFDPVYYLKNN 531
Query: 577 DDLWNVFGSDR-SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
D+ N G++ A QH+IT G EGR S + + +
Sbjct: 532 SDVSNAVGANNYEGAYQHFITSGYNEGRR---SSPIYDGSYYQNYNPELRVYDFY 583
Score = 151 bits (380), Expect = 5e-34, Method: Composition-based stats.
Identities = 82/345 (23%), Positives = 120/345 (34%), Gaps = 46/345 (13%)
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEG 394
DF + + Y Y DL + G D H+ G+ EG
Sbjct: 223 DFYKLIYHFLTYGIHEGRSACLNFEPIVYAIRYPDLFKNFGNLDYKPYFTHYLISGIREG 282
Query: 395 R--------------DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-A 439
R ++ FD Y Y DL+ G ++ H+ T G+KEGR
Sbjct: 283 RSGLYDYNFIPNPIENLIFDEKFYADKYPDLKANLGYNKAKLFMHWKTTGIKEGRTSSYV 342
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRN 497
F Y+ ++ D+ A + +HF G EGR + Y Y DL+
Sbjct: 343 FDPDYYLKNNSDVAKAVGANN--YKGAYEHFITSGYNEGRKSSPIYHGSYYQNCYSDLKT 400
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
D H+IT+G+ E RN F+ + Y + DL A ++ + H+
Sbjct: 401 ---HDFYKLIYHFITYGIHESRNACLNFEPIVYAIRYPDLFKALGNSD--YKPYFTHYLI 455
Query: 557 FGYEEGRS--------------ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G EGRS + F+ Y Y DL FG DR+ H+ G+KEG
Sbjct: 456 SGIREGRSGLYDYNFIPNPIENLIFDEKFYADKYPDLKAKFGYDRARLFMHWKVSGIKEG 515
Query: 603 RALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
R S F V L S + + Y + G
Sbjct: 516 RT---SSYVFDPVYYLKNNSD---VSNAVGANNYEGAYQHFITSG 554
Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats.
Identities = 71/284 (25%), Positives = 110/284 (38%), Gaps = 33/284 (11%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITF 399
E + + Y Y DL D ++ + HF +G+ E R+ + F
Sbjct: 369 EHFITSGYNEGRKSSPIYHGSYYQNCYSDLKT---HDFYKLIYHFITYGIHESRNACLNF 425
Query: 400 DSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRN--------PDA-----FKALEY 445
+ +Y Y DL G SD HY+ G++EGR+ P+ F Y
Sbjct: 426 EPIVYAIRYPDLFKALGNSDYKPYFTHYLISGIREGRSGLYDYNFIPNPIENLIFDEKFY 485
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDLRNVFGSD- 502
+ DL F + H+ G +EGR ++ D YL + D+ N G++
Sbjct: 486 ADKYPDLKAKFGYDRARL---FMHWKVSGIKEGRTSSYVFDPVYYLKNNSDVSNAVGANN 542
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
A +H+IT G EGR Y ++ + + +HF G EG
Sbjct: 543 YEGAYQHFITSGYNEGRRSSPIYDGSYYQNYNPELRVY-----DFYKLIEHFLVHGIHEG 597
Query: 563 RSI--TFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGR 603
R F +Y+ Y DL+ FG+ HY+ G+KEGR
Sbjct: 598 RRACSNFGAKVYVARYSDLFKNFGTSDYKPYFTHYLISGIKEGR 641
>gi|254474734|ref|ZP_05088120.1| secreted protease B [Ruegeria sp. R11]
gi|214028977|gb|EEB69812.1| secreted protease B [Ruegeria sp. R11]
Length = 438
Score = 175 bits (443), Expect = 3e-41, Method: Composition-based stats.
Identities = 78/369 (21%), Positives = 137/369 (37%), Gaps = 29/369 (7%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD------I 79
+ +P L T+ +D +E R A +++ F E + SD +
Sbjct: 36 FADTTEPADLPTNTTFYDWQTFTAAERENFREAFAHIETFLNVDFVEVNGQSDPDLNLGL 95
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL-HEIGHALGLMHPG 138
I + + R +D V+ + + HEIGHA+GL H
Sbjct: 96 VSIPGSTVGIGGYSIGYRGTTITRWDGFAVFDNQQDMSRDDRESLILHEIGHAMGLQHSF 155
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
N P ++EN+ L +VMSY + +D+ M+ D++A+Q I+GA
Sbjct: 156 EANPALP-----AEFENN--LYTVMSYSPNPINGLDSD-----AMMLFDVIALQDIWGAA 203
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + GN Y + + I+D+GG D D + +DL ++SS +
Sbjct: 204 QYNSGNTTY----SGARTDTVDLIWDTGGVDTFDASDRS-SGVRLDLRQMAFSSFDA-DS 257
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
++ I IE+ +G G D + GN +NN G D G +G D+ I
Sbjct: 258 DVVIGHGVTIENAIGGLGRDRLTGNGSNNQLTGGRGRDTLLGQTGNDSLVGNGG---VDI 314
Query: 319 YRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + L + L D++N + + D Q G
Sbjct: 315 LKGGSGRDTLRGGYGNDRLLGNSGNDLLLGGPGRDTLNGQFGNDQMQGMGGADTFQFFGN 374
Query: 378 DVFESMKHF 386
++++ F
Sbjct: 375 TGNDTIRDF 383
>gi|254470269|ref|ZP_05083673.1| hypothetical protein PJE062_4814 [Pseudovibrio sp. JE062]
gi|211960580|gb|EEA95776.1| hypothetical protein PJE062_4814 [Pseudovibrio sp. JE062]
Length = 1364
Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats.
Identities = 101/379 (26%), Positives = 149/379 (39%), Gaps = 44/379 (11%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRY------- 98
+ A E R A+ + V + ET+ ++ F + G +
Sbjct: 1 MGELAAERVREAMDYVASVTGIEIVETTDQVAEFNFKDNGKGAGAGHGGYAYQRDLDAWY 60
Query: 99 --FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ IN + H LHEIGHALGL H G YNG P Y + ND
Sbjct: 61 SDYTVINLPAGNGHGRHDSDTGHFVHTVLHEIGHALGLGHQGPYNGARPNYPNGVRFLND 120
Query: 157 SFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS----------LGNN 205
S SVMSY ++ AS Y T +D++A+ KIYG + LG+
Sbjct: 121 SRHVSVMSYLAQEKNYTSGASNAYPQTFAAADLLALDKIYGDQSYNGKTFGTHNAFLGDT 180
Query: 206 IYKIEVQQKDSPFI-------------QTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-- 250
+Y D T+ D GG+D LDL+ G K IDL
Sbjct: 181 VYGFNTNISDENNFRMVNLAKYGDNNSYTLVDGGGNDTLDLS--GFRKATIDLRVTQADD 238
Query: 251 -----SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
SS+ G KN++IA TVIE+ VG+ GND + GN A+N + GN+ G G D
Sbjct: 239 TMPYSSSVDGERKNISIAVGTVIENAVGTRGNDKITGNHADNHLWGGRGNNKMYGLEGDD 298
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEY 364
F+ A + + + + + + D + F D+ I NV S +
Sbjct: 299 HFYLEAGNDVMDGGEGSDWLHIDTDRDMTIDLNKEELVSSFGRDKIISIENVDSGSGDDR 358
Query: 365 TASYEDLIQVIGQDVFESM 383
E ++ G D +++
Sbjct: 359 IIGNEAANELEGNDGDDTL 377
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D L GG + + + + G + N T+ ++++G +G+D V G+ +
Sbjct: 1109 GND-LRNEFHGGNGDDVLIGAGGDDYLQGGDGNDTLLGGLGNDNLIGGAGDDTVNGDDGS 1167
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ SG D+ DG G DT Y L + + Q +S+VE +
Sbjct: 1168 DLITLGSGTDIIDGGDGRDTLRYDGSESLT----VNLSRTDFQNTGIGQLKVSNVEVVEG 1223
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + L + + L G+D
Sbjct: 1224 GSGDDVLIGDEVANTLRGGSGADTLQGGGGRD 1255
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 13/179 (7%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G++ + I G D L G ++L+ + + G
Sbjct: 1154 GGAGDDTVNGDDGSDLITLGSGTDIIDGGDGRDTLRY--DGSESLTVNLSRTDFQNTGIG 1211
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ ++ +E V G SG+DV+IG+ N SG D G G D +
Sbjct: 1212 QLKVSN-----VEVVEGGSGDDVLIGDEVANTLRGGSGADTLQGGGGRDYIVLGNDDAVD 1266
Query: 317 KIYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ + + + D D+ R D D+ + + A+ +
Sbjct: 1267 RVVYTSVSDVTLEGAAELVSGFDKGEDLFDFRQIDANTDNDGDQAFLFSDDGAAANSVW 1325
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 3/128 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G+ G++ +IGN+ N+V GND+ DG G D + A ++ +
Sbjct: 715 DRLIGTEGDNTLIGNAGNDVLSGLGGNDLLDGGEGDDKLYGGAGDDTLVGGAGDDILEAA 774
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HF 386
+ N + + L D + L A + L G D +
Sbjct: 775 EGNNVLHGDAGN-DLLTTGDGDDELHGGAGEDKLTSGAGNDRLFGDNGSDELRAGAGDDE 833
Query: 387 YEFGLSEG 394
G E
Sbjct: 834 LHGGAGED 841
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 48/161 (29%), Gaps = 14/161 (8%)
Query: 236 IGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G L I G + + + + + G +G+D++ G S ++ G
Sbjct: 586 FAGTDGSNSLRGMGGDDVIDGRGGDDKLEGNDGNDKINGGAGDDIIFGGSGDDELTGGDG 645
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-------------LSDV 341
D+ G SG D F L + + + D L +
Sbjct: 646 KDLLYGGSGDDVFIIGQGKDLLDGGAGHDIVRASNDEALVVDLKHTRLVTASGVKILRGI 705
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
E + + + L A + L + G D+ +
Sbjct: 706 EGFEAGGGDDRLIGTEGDNTLIGNAGNDVLSGLGGNDLLDG 746
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 14/141 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ + + G GND++ G + N+ +G+DV + G D
Sbjct: 992 TLNGGAGNDSLWGGDDRDLLNGGDGNDLLEGEADNDTLNGGAGDDVVNAGDGNDKITLDE 1051
Query: 312 PSYLYKIYRFENAIIVYDANEH--------------KQDFLSDVERLRFADQCIDSVNVK 357
+ + + E+ +IV + D +S +E + D
Sbjct: 1052 GNDIIRGGEGEDRLIVSGSKAARIDLNASGAQQTGYGLDVISGIENISGGDGDDHLTGND 1111
Query: 358 QRSILEYTASYEDLIQVIGQD 378
R+ + LI G D
Sbjct: 1112 LRNEFHGGNGDDVLIGAGGDD 1132
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 64/190 (33%), Gaps = 8/190 (4%)
Query: 225 SGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
GGDD L D TLIG N + + G E + + +++VG +G+D+
Sbjct: 711 GGGDDRLIGTEGDNTLIGNAGNDVLSGLGGNDLLDGGEGDDKLYGGAGDDTLVGGAGDDI 770
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ NNV +GND+ G D A + + + ++ +
Sbjct: 771 LEAAEGNNVLHGDAGNDLLTTGDGDDELHGGAGEDKLTSGAGNDRLFGDNGSDELRAGAG 830
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
D E A + + L + L G D +EG + F
Sbjct: 831 DDELHGGAGEDQLYGEDGNDT-LHGGDGDDILRGEAGDDELHGDAGNDNLIDTEGNNALF 889
Query: 400 --DSYLYLGS 407
D YL +
Sbjct: 890 GGDGDDYLEA 899
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 26/129 (20%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ G D + G +DL + I N TI + IES+ GND +
Sbjct: 413 IHGGEGTDTIYF--YGRQDARVDLTENT---IETAYGNDTI---SGIESISAGHGNDYLR 464
Query: 282 GNSANNVFFESSGNDVF------------------DGSSGLDTFFYYAPSYLYKIYRFEN 323
GN+ +N + G+D+ G +G DT + L + +
Sbjct: 465 GNAEDNSIRGNGGDDIILGEAGDDYLSGSHGNDELYGGTGNDTLNEGSGDDLVEAGEGND 524
Query: 324 AIIVYDANE 332
II+ D N+
Sbjct: 525 RIILGDGND 533
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S + A T IE+V SSG D V GN A+N+ +G D +G +G D+ +
Sbjct: 945 LSYTSARNTGIGQASITGIENVTTSSGRDRVTGNDADNIIKTHAGEDTLNGGAGNDSLWG 1004
Query: 310 YAPSYLYKIYRFEN 323
L +
Sbjct: 1005 GDDRDLLNGGDGND 1018
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + + + G +GND +I NN F G+D + G D A
Sbjct: 851 TLHGGDGDDILRGEAGDDELHGDAGNDNLIDTEGNNALFGGDGDDYLEAGDGKDILDGGA 910
Query: 312 PSYLYKIYRFENAIIVYDANEH-----------------------KQDFLSDVERLRFAD 348
+ + R + I D +H Q ++ +E + +
Sbjct: 911 GNDTILLSRGRDTIRGGDGVDHLIADYEENLSINLSYTSARNTGIGQASITGIENVTTSS 970
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+I++ A + L G D
Sbjct: 971 GRDRVTGNDADNIIKTHAGEDTLNGGAGNDSL 1002
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 33/80 (41%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N T+ + + G +G+D + G++ N+ ++ GN+ G G D
Sbjct: 843 LYGEDGNDTLHGGDGDDILRGEAGDDELHGDAGNDNLIDTEGNNALFGGDGDDYLEAGDG 902
Query: 313 SYLYKIYRFENAIIVYDANE 332
+ + I++ +
Sbjct: 903 KDILDGGAGNDTILLSRGRD 922
Score = 40.9 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 17/173 (9%)
Query: 222 IYDSGGDDLLD-------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I G+D+LD +T+ IDL G + + T +E++ G+
Sbjct: 526 IILGDGNDILDGGAGNDRITINSKKGARIDLAVTDAQDTG-----YGMDKITNVENITGN 580
Query: 275 SGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+DV G +N G+DV G G D KI I++ +
Sbjct: 581 KHDDVFAGTDGSNSLRGMGGDDVI-DGRGGDDKL--EGNDGNDKINGGAGDDIIFGGSGD 637
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKH 385
+ D + L + D + Q +L+ A ++ + + + +KH
Sbjct: 638 DELTGGDGKDLLYGGSGDDVFIIGQGKDLLDGGAGHDIVRASNDEALVVDLKH 690
>gi|238623412|emb|CAS06700.1| alkaline metalloprotease [Pseudomonas chlororaphis subsp.
chlororaphis]
Length = 286
Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats.
Identities = 62/278 (22%), Positives = 100/278 (35%), Gaps = 43/278 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQY-------------WSNYFIRYKPDVLTTHRLSFDITELN 48
N KP Y+ ++ A LLRD + + H +S ++ N
Sbjct: 12 VNGKPSYSVDQAATQLLRDGAAYQDLNGNGKIELTYTFLTSASSSTMYKHGIS-GFSQFN 70
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRY-- 98
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 71 AQQKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDG 130
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDS 157
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 131 TSWYLINSSYTQNKAPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGEDT 190
Query: 158 FLTSVMSYFMPQDSMMDASF----GYCATPMVSDIVAVQKIYGAP------------KGS 201
S+MSY+ ++ + S Y + P++ DI A+QK+YGA +
Sbjct: 191 RGYSIMSYWSESNTDQNFSKAGVEAYSSGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSN 250
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
G + + + +++D+GG D LD +
Sbjct: 251 TGRDF--LSASSSADKLVFSVWDAGGKDTLDFSGFTQN 286
>gi|238623364|emb|CAS06676.1| alkaline metalloprotease [Pseudomonas sp. W2a]
Length = 229
Score = 173 bits (438), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 83/230 (36%), Gaps = 26/230 (11%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
+ + H ++ ++ N + A A+ W+ V +TF E + D
Sbjct: 1 TYTFLTSASSSTMNKHGIA-GFSQFNAQQKAQAVLAMQSWADVAKVTFTEKASGGDGHMT 59
Query: 83 SSNN--------GYVCTPRYDSRYFMEINFDKADVWRYG--IGKGTILSHNALHEIGHAL 132
N + P + Y + + + HEIGH L
Sbjct: 60 FGNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTL 119
Query: 133 GLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSD 187
GL HPG YN G D Y D+ S+MSY+ ++ + S G Y + P++ D
Sbjct: 120 GLAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDD 179
Query: 188 IVAVQKIYGAP-KGSLGNNIYKIE---------VQQKDSPFIQTIYDSGG 227
I A+QK+YGA G+ Y + +++D GG
Sbjct: 180 IAAIQKLYGANYNTRAGDTTYGFNSNTGRDFLSATSNADKLVFSVWDGGG 229
>gi|163737436|ref|ZP_02144853.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
BS107]
gi|161388962|gb|EDQ13314.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
BS107]
Length = 482
Score = 173 bits (438), Expect = 1e-40, Method: Composition-based stats.
Identities = 70/300 (23%), Positives = 107/300 (35%), Gaps = 43/300 (14%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN--- 123
++ F E SD + + Y M D W L +
Sbjct: 150 NVDFVEVQGSSDPDLNLGSVTIPGSTVGIGGYSMSFRGDDITRWDGYAVFDNTLDMSQDN 209
Query: 124 ----ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
LHE+GHALGL H N E DS L SVMSY + D+
Sbjct: 210 RESLILHELGHALGLQHTHDSNLPE---------EYDSNLYSVMSYRENPLNGQDSD--- 257
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
M+ D++A+Q I+GA + GN Y+ + + ++D+GG D + +
Sbjct: 258 --AMMLFDVLALQDIWGAADFNTGNTTYR----GSRTDTVDVVWDTGGTDTFNASNRTNA 311
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+DL +SS + ++TIAQ IE+ +G G D + GN +NN G D
Sbjct: 312 VA-LDLREMHFSSFDA-DSDVTIAQGVTIENAIGGRGRDRITGNDSNNRLVGGGGRDTLR 369
Query: 300 GSSGLDTFFY----------------YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G G D ++ A + A + D + D +
Sbjct: 370 GDGGNDALNGNSGVDLLVGGGGNDRLNGAGGNDRLVGNSGADLFIFARKGGNDTIRDFQD 429
>gi|84686282|ref|ZP_01014177.1| Hemolysin-type calcium-binding toxin [Maritimibacter alkaliphilus
HTCC2654]
gi|84665809|gb|EAQ12284.1| Hemolysin-type calcium-binding toxin [Rhodobacterales bacterium
HTCC2654]
Length = 463
Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats.
Identities = 90/345 (26%), Positives = 142/345 (41%), Gaps = 25/345 (7%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLTFEETSIHSD-------IKFISSNNGYVCTPRYDSR 97
T +P+ + V R+ L +++ F E S + D + G + P+Y S
Sbjct: 52 TAFSPDEKSVVRFLLETVETFLNVDFVEVSGNRDPDLNLGKVTMFPGTAG-LGGPQYSSS 110
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
FD V+ I + + LHEIGHA+GL H P Y D+
Sbjct: 111 GTRITAFDGFAVFNNTIDLSSGRQNLILHEIGHAMGLDHTFEGARLDPAY--------DN 162
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
S+MSY +DA+ M D++A+Q I+GA + G Y + +
Sbjct: 163 LHYSLMSYDADPTPGIDATIR----MMAYDMLALQDIWGAATYNDGATSY--AGPRLGAG 216
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ ++DSGG D +D + G ++DL +S G E +M +A +TVIE+ GS+
Sbjct: 217 KVDVVWDSGGTDWMDASAWG-RPVHLDLGEGMFSRWFGTE-DMVVAFNTVIENARGSAFA 274
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D VIGN N F G D+ G G DT + A + + ++ + D N+ +
Sbjct: 275 DTVIGNDYANRLFGGGGGDLVRGRKGADTVYGDAQNDEVRGGAGDDIVYGGDGNDTVKGT 334
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D A + S+ T S +DL G D +
Sbjct: 335 PGDDRVYGEAGDDLVRGGPGNDSLFGGTGS-DDLRGWRGNDRLDG 378
>gi|254426342|ref|ZP_05040058.1| Peptidase M10 serralysin C terminal family [Synechococcus sp. PCC
7335]
gi|196187756|gb|EDX82722.1| Peptidase M10 serralysin C terminal family [Synechococcus sp. PCC
7335]
Length = 589
Score = 172 bits (435), Expect = 2e-40, Method: Composition-based stats.
Identities = 67/327 (20%), Positives = 109/327 (33%), Gaps = 58/327 (17%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYFM 100
N + R + + V + +E + + D +N + +
Sbjct: 104 GFNAFNSAQKAATRSIMKMYESVANFDLDELTDNKDRDATIRLANADGTNRFDGIAGFPS 163
Query: 101 EINFDKADVW--------RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
E +F + DVW G +HEIGHALGL H + D
Sbjct: 164 EPDFMQGDVWIDSVNDPRNTNPKIGNKGYWVLMHEIGHALGLTHSHETHA---NLDGPMD 220
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
DS +VMSY + + + M+ DI A+Q +YGA GN Y
Sbjct: 221 SWLDSKEFTVMSYKAHVGGELIPNPVDEVDQPQSLMMYDIAAIQAMYGANFDTRSGNTTY 280
Query: 208 KIEVQQK-------------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ +TI+D G D D + G ++ I+L +WS +
Sbjct: 281 TFSTSTGEMFANGQSLGKPENNTIFRTIWDGNGRDTYDFSNTGRSQS-INLRPGAWSDLS 339
Query: 255 G--------------------YEKNMTIA------QHTVIESVVGSSGNDVVIGNSANNV 288
++ A ++IE+ G G+D + GN A N
Sbjct: 340 ADSTAQNARLKIEWGGVVTKRARGHIANALQHNDDPRSLIENAKGGGGSDTIQGNIARNH 399
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + G+D G DT + L
Sbjct: 400 LYGNVGDDRLWGWDNNDTLDGGSEDDL 426
>gi|113474014|ref|YP_720075.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
gi|110165062|gb|ABG49602.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
Length = 928
Score = 172 bits (435), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 70/362 (19%)
Query: 9 TTERIADHLLRDQYWSN------YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
++ + + LL W + + + ++ + + + + +
Sbjct: 297 SSNKKINGLLTKTLWDTEEENIITYSFFSEQAINSYYGRENPLPVTDPIKINVKDIFNLF 356
Query: 63 SKVVDLTFEETSIHSD----IKFISSNN-------GYVCTPRYDSRYFMEINFDKADVWR 111
+ +D+ F+E +D I+ + SN GY P S + + + V++
Sbjct: 357 EQYIDVRFQEVGDTADNYGQIRIMLSNGPLQNESRGYAYQPPGTSENPADGDIHLSSVYQ 416
Query: 112 --YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ 169
Y G+ HEIGHALGL HPG+Y+ G + Y D+ ++M+Y
Sbjct: 417 DEYEDVPGSYGYITIAHEIGHALGLKHPGNYSPGERAPFL--SYAQDNNTNTMMTYI--- 471
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIE-----------VQQKDSP 217
+ Y TPM DI ++Q +YG + N Y + + D+
Sbjct: 472 --GLGGLNQYSTTPMTYDIQSLQYLYGRNNNFNAENTTYSFDRVYGFFDGNQYLGSSDTE 529
Query: 218 FIQTIYDSGGDDLLDLT-------LIGGVKNYIDLNTE---------------SWSSIGG 255
T++D GG D +DL+ IDL ++ G
Sbjct: 530 TKLTLWDGGGFDTIDLSKLPDLELADFTYDYRIDLREGGLITTTDAYNQHEYIAFQDTSG 589
Query: 256 -----YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-----SSGNDVFDGSSGLD 305
IA V+E+++ S G+D++ N+A N F +GND ++ D
Sbjct: 590 KKYKTSTSGTAIAYGAVMENLINSRGDDLIYANNAANKFSGYTPGKYTGNDKIFRTNQKD 649
Query: 306 TF 307
Sbjct: 650 VL 651
>gi|194335832|ref|YP_002017626.1| Cadherin [Pelodictyon phaeoclathratiforme BU-1]
gi|194308309|gb|ACF43009.1| Cadherin [Pelodictyon phaeoclathratiforme BU-1]
Length = 1134
Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats.
Identities = 84/224 (37%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 400 DSYLYLGSYDDLRNVFGSDR------GAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
S+ YL S+ DL +D A RHYI HG+ EGR F A EY+AS+ DL+
Sbjct: 7 ASWEYLASHTDLMTWLRADGVTDADSATATRHYIEHGISEGRTI-TFNAWEYLASNPDLM 65
Query: 454 NAF---ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN------VFGSDRG 504
N HF +G E R +TF+++ YL S DL N V +D
Sbjct: 66 NWLRADGVTDADAITAAKHFIGYGYNEERTITFNAWEYLASNPDLMNWLRADGVTDADAI 125
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA---PDLVQAGKDHFSNFGYEE 561
AA+H+I +G E R F EY+AS+ DL+N HF +GY E
Sbjct: 126 TAAKHFIGYGYDEERTI-TFDVWEYLASNPDLMNWLGADGITDADAITAAKHFIAYGYNE 184
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
GR++ F+ YL SY+DL N FG+D AA HY+T+G +EGRA+
Sbjct: 185 GRTMIFDAAAYLASYEDLRNAFGNDTLAATIHYVTYGYREGRAV 228
Score = 154 bits (388), Expect = 6e-35, Method: Composition-based stats.
Identities = 83/226 (36%), Positives = 114/226 (50%), Gaps = 26/226 (11%)
Query: 363 EYTASYEDLI------QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
EY AS+ DL+ V D + +H+ E G+SEGR ITF+++ YL S DL N
Sbjct: 10 EYLASHTDLMTWLRADGVTDADSATATRHYIEHGISEGRTITFNAWEYLASNPDLMNWLR 69
Query: 417 SDRG------AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF---ADAPDLVQVGK 467
+D AA+H+I +G E R F A EY+AS+ DL+N
Sbjct: 70 ADGVTDADAITAAKHFIGYGYNEERTI-TFNAWEYLASNPDLMNWLRADGVTDADAITAA 128
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG------SDRGAAARHYITHGVKEGRNP 521
HF +G +E R +TFD + YL S DL N G +D AA+H+I +G EGR
Sbjct: 129 KHFIGYGYDEERTITFDVWEYLASNPDLMNWLGADGITDADAITAAKHFIAYGYNEGRTM 188
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
F A Y+AS+EDL NAF + A H+ +GY EGR++
Sbjct: 189 -IFDAAAYLASYEDLRNAFGND---TLAATIHYVTYGYREGRAVNN 230
Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats.
Identities = 70/206 (33%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI------QVIGQDVFESMKH 385
+ D S + + I + EY AS DL+ V D + KH
Sbjct: 25 DGVTDADSATATRHYIEHGISEGRTITFNAWEYLASNPDLMNWLRADGVTDADAITAAKH 84
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG------AAARHYITHGVKEGRNPDA 439
F +G +E R ITF+++ YL S DL N +D AA+H+I +G E R
Sbjct: 85 FIGYGYNEERTITFNAWEYLASNPDLMNWLRADGVTDADAITAAKHFIGYGYDEERTI-T 143
Query: 440 FKALEYIASHEDLINAFADAPDLVQ---VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F EY+AS+ DL+N HF +G EGR + FD+ YL SY+DLR
Sbjct: 144 FDVWEYLASNPDLMNWLGADGITDADAITAAKHFIAYGYNEGRTMIFDAAAYLASYEDLR 203
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPD 522
N FG+D AA HY+T+G +EGR +
Sbjct: 204 NAFGNDTLAATIHYVTYGYREGRAVN 229
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 438 DAFKALEYIASHEDLI---NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + EY+ASH DL+ A H+ G EGR +TF+++ YL S D
Sbjct: 4 GSLASWEYLASHTDLMTWLRADGVTDADSATATRHYIEHGISEGRTITFNAWEYLASNPD 63
Query: 495 LRN------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF---ADAPD 545
L N V +D AA+H+I +G E R F A EY+AS+ DL+N
Sbjct: 64 LMNWLRADGVTDADAITAAKHFIGYGYNEERTI-TFNAWEYLASNPDLMNWLRADGVTDA 122
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA------AAQHYITHGM 599
HF +GY+E R+ITF+ YL S DL N G+D AA+H+I +G
Sbjct: 123 DAITAAKHFIGYGYDEERTITFDVWEYLASNPDLMNWLGADGITDADAITAAKHFIAYGY 182
Query: 600 KEGRALGISGMQF-KSVMNLSEKSRDKADLSLS 631
EGR + + S +L + +
Sbjct: 183 NEGRTMIFDAAAYLASYEDLRNAFGNDTLAATI 215
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 331 NEHKQDFLSDVERL----RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE----- 381
N + D ++D + + F D + EY AS DL+ +G D
Sbjct: 112 NWLRADGVTDADAITAAKHFIGYGYDEERTITFDVWEYLASNPDLMNWLGADGITDADAI 171
Query: 382 -SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ KHF +G +EGR + FD+ YL SY+DLRN FG+D AA HY+T+G +EGR + +
Sbjct: 172 TAAKHFIAYGYNEGRTMIFDAAAYLASYEDLRNAFGNDTLAATIHYVTYGYREGRAVNNY 231
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+H IE+V G++ +D + GNS +N +G+D+ G G DT S
Sbjct: 1077 YKHDFIENVKGTAYDDTLTGNSLDNHIDGGAGDDILKGLVGNDTIDGGKRS 1127
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 48/147 (32%), Gaps = 8/147 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ S+ N+T + G S ++ + G + N+ +GND+ G +G D
Sbjct: 515 TDGTNSTAKTITVNLTDIFENTGLLLEGDSNDNRLTGGTGNDTLVGGNGNDILRGGAGTD 574
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR-FADQCIDSVNVKQRSILEY 364
+ A + I + + E D ++ L Q ++ N +
Sbjct: 575 SMDGGAGDDTFVIVGDLSGGGKVGSPE---DTVALGHPLSDLNGQDLNEDNNGAVETIVG 631
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L + H+ G+
Sbjct: 632 GEGNDTLY----VYGTADLSHYVISGI 654
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N E S I G +++ + V +++ G++ ND +IG + ++ +G+D+ G D
Sbjct: 774 NPEIMSVINGEHRDL--DNNGVFDTIFGTNDNDYIIGTAFDDTLDGLNGDDLLSGKEEND 831
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANE 332
TF I + + +
Sbjct: 832 TFKINGSGEKTIIDSGGDHDTLDLSGS 858
Score = 37.4 bits (85), Expect = 7.2, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G + N+ ++ +D DG +G D + +KI I+ +H
Sbjct: 795 DTIFGTNDNDYIIGTAFDDTLDGLNGDDLLSGKEENDTFKINGSGEKTIIDSGGDHDTLD 854
Query: 338 LSD 340
LS
Sbjct: 855 LSG 857
>gi|238623425|emb|CAS06707.1| alkaline metalloprotease [Pseudomonas fluorescens bv. F]
Length = 277
Score = 171 bits (433), Expect = 4e-40, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 98/267 (36%), Gaps = 37/267 (13%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQE------- 53
N KP ++ + A LLRD + + K ++ T S + +N +
Sbjct: 11 VNGKPSFSVDEAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGITGFSQFSA 70
Query: 54 ----VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFME 101
A A+ W+ V ++TF E S D N + P + Y
Sbjct: 71 QQKAQAALAMQSWADVANVTFTEKSFGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGT 130
Query: 102 INFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSF 158
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 131 SWYLTGGGYNVNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGEDTR 190
Query: 159 LTSVMSYFMPQDSMMDASF----GYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ- 212
SVMSY+ ++ + S Y + P++ DI A+QK+YGA G+ Y
Sbjct: 191 GYSVMSYWSESNTDQNFSKSGVEAYASGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNA 250
Query: 213 --------QKDSPFIQTIYDSGGDDLL 231
+ +++D+GG D L
Sbjct: 251 GRDFLSASSSSDKVVFSVWDAGGKDTL 277
>gi|209967145|ref|YP_002300060.1| hypothetical protein RC1_3906 [Rhodospirillum centenum SW]
gi|209960611|gb|ACJ01248.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 912
Score = 171 bits (432), Expect = 5e-40, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 25/269 (9%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ YI L + ++ G + T+ + + G GND V G + +G+D
Sbjct: 652 ARQYIRLGPDDD-TLRGGGGDDTVGSGEGRDLLYGDEGNDSVFGGEGYDRLSGGAGDDTI 710
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---- 354
DG SG+D A + + D S VE +RF DQ +
Sbjct: 711 DGGSGVDVVRIEAARSAVTLEAAGPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVR 770
Query: 355 -------NVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLY 404
Y A + D+ + F+ ++H+ FG +EGRD T FD Y
Sbjct: 771 FAAVQPDGGGAFDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAY 830
Query: 405 LGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDL 462
L + D+R + + + HY+ G +E R+P A F Y+ + D+ +A D
Sbjct: 831 LARWADVRVAVEAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP--- 887
Query: 463 VQVGKDHFSNFGCEEGRFVT-FDSYLYLG 490
H+ +G E R T D+ L+L
Sbjct: 888 ----LRHWLVWGIGEDRIATAADTGLWLA 912
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/331 (18%), Positives = 101/331 (30%), Gaps = 54/331 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + T V+G + ++ G+D G D +
Sbjct: 628 DYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSGEGRDLLYGDE 687
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ F + D + S V+ +R +
Sbjct: 688 GNDS----VFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEAAGPWGVRLSG- 742
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G DV ++ I FD + + D G
Sbjct: 743 ----AATGTDVASGVEL-----------IRFDDQVVYVTLPVRFAAVQPDGG-------- 779
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSY 486
AF Y+A D+ A AD Q G +H+ FG EGR T FD
Sbjct: 780 ---------GAFDEAFYLAQWADVRAAVADG--RFQSGLEHYLAFGQAEGRDPTPLFDEE 828
Query: 487 LYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 544
YL + D+R + + + HY+ G +E R+P A F Y+ + D+ +A D
Sbjct: 829 AYLARWADVRVAVEAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP- 887
Query: 545 DLVQAGKDHFSNFGYEEGR-SITFNPDLYLT 574
H+ +G E R + + L+L
Sbjct: 888 ------LRHWLVWGIGEDRIATAADTGLWLA 912
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL + D+R R + HY+ G EGR+P F Y+A D+ A
Sbjct: 782 FDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV 841
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+G +H+ FG+ E R + F+ YL D+ + +H++ G
Sbjct: 842 EAGQ--FHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADA----GIDPLRHWLVWG 895
Query: 599 MKEGR 603
+ E R
Sbjct: 896 IGEDR 900
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF Y+A D+ A AD Q+G +H+ FG EGR T F+ + YL + D+
Sbjct: 781 AFDEAFYLAQWADVRAAVADG--RFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVR 838
Query: 581 NVFGSDR-SAAAQHYITHGMKEGRALG 606
+ + + +HY+ G +E R
Sbjct: 839 VAVEAGQFHSGYEHYLAFGWREDRDPS 865
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 31/110 (28%), Gaps = 12/110 (10%)
Query: 270 SVVGSSGNDV-VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-----------K 317
+ + SG +IG S + S G+D DG +G D F Y +
Sbjct: 56 TAITDSGESTRIIGGSGADTLAGSFGDDTLDGGAGDDIFLYGGGNTDNGRDLIQNLATGD 115
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
I R NA + ++ A + A
Sbjct: 116 IIRVSNADFSATTITAGNGTSVGLNEIQIATANGRTTLHIGTDAQADAAD 165
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALGI 607
F+ YL + D+ R + +HY+ G EGR
Sbjct: 781 AFDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTP 823
>gi|197105325|ref|YP_002130702.1| hypothetical protein PHZ_c1862 [Phenylobacterium zucineum HLK1]
gi|196478745|gb|ACG78273.1| hypothetical protein PHZ_c1862 [Phenylobacterium zucineum HLK1]
Length = 737
Score = 171 bits (432), Expect = 5e-40, Method: Composition-based stats.
Identities = 79/360 (21%), Positives = 133/360 (36%), Gaps = 46/360 (12%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKF-----ISSNNGYVCTPR----YDSRYFMEIN-FDKA 107
AL E++ + + + T F ++ + G P+ D + N
Sbjct: 344 ALQEYTPITGINYVRTDDIEQATFRLVTTVNQDFGAKFYPQDPGLGDLQGLGIFNLISGG 403
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND------YENDSFLTS 161
+ G LHE GHA G+ HP GG + +D Y+ + + +
Sbjct: 404 FTAPASLQPGGFSFGVVLHEFGHAHGVAHPHDNGGGSEIMLGVSDSSSLGIYDLNQGVYT 463
Query: 162 VMSYFMPQDSMMDAS---------FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
VMSY + D + G+ T DI +Q YG + G+++Y+IE
Sbjct: 464 VMSYNDGWQTHPDGTLEFSSKTWGSGWSGTLGAFDIAVLQARYGVHAHNAGDDVYQIESL 523
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTI 262
Q+ S + QTI+D+GG D + + GG +IDL + S + G TI
Sbjct: 524 QRWS-YYQTIWDTGGTDTIAYS--GGRDAHIDLLAATLDYTPTGGGVVSFVNGVFGGFTI 580
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF- 321
A VIE+ G G+D ++GN+ N+ +G+D G +G D +
Sbjct: 581 AGGVVIENATGGQGDDALMGNAVGNLLKGGTGDDTLIGRAGDDRLMGETGQDDLRGGEGA 640
Query: 322 ----ENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
D L + F + +++ Q+ L + ED+
Sbjct: 641 DTLEGGTGTDTLHGGEGDDVLIGGTGKDVFVFTEAGTETIADYQKGELIDLSGLEDVTFA 700
>gi|209963360|ref|YP_002296275.1| hypothetical protein RC1_0011 [Rhodospirillum centenum SW]
gi|209956826|gb|ACI97462.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 1110
Score = 171 bits (432), Expect = 5e-40, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 25/269 (9%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ YI L + ++ G + T+ + + G GND V G + +G+D
Sbjct: 850 ARQYIRLGPDDD-TLRGGGGDDTVGSGEGRDLLYGDEGNDSVFGGEGYDRLSGGAGDDTI 908
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---- 354
DG SG+D A + + D S VE +RF DQ +
Sbjct: 909 DGGSGVDVVRIEAARSAVTLEAAGPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVR 968
Query: 355 -------NVKQRSILEYTASYEDLIQVIGQDV-FESMKHFYEFGLSEGRDIT--FDSYLY 404
Y A + D+ + ++H+ FG +EGRD T FD Y
Sbjct: 969 FEAVQPDGGGAFDEAFYLARWADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAY 1028
Query: 405 LGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDL 462
L + D+R + + + HY+ G +E R+P A F Y+ + D+ +A D
Sbjct: 1029 LARWADVRVAVEAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP--- 1085
Query: 463 VQVGKDHFSNFGCEEGRFVT-FDSYLYLG 490
H+ +G E R T D+ L+
Sbjct: 1086 ----LRHWLVWGIGENRIATAADTGLWFA 1110
Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/319 (17%), Positives = 94/319 (29%), Gaps = 53/319 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + T V+G + ++ G+D G D +
Sbjct: 826 DYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSGEGRDLLYGDE 885
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ F + D + S V+ +R +
Sbjct: 886 GNDS----VFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEAAGPWGVRLSG- 940
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G DV ++ I FD + + D G
Sbjct: 941 ----AATGTDVASGVEL-----------IRFDDQVVYVTLPVRFEAVQPDGG-------- 977
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSY 486
AF Y+A D+ A V G +H+ FG EGR T FD
Sbjct: 978 ---------GAFDEAFYLARWADVRAAV--NAGQVMSGLEHYLAFGQAEGRDPTPLFDEE 1026
Query: 487 LYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 544
YL + D+R + + + HY+ G +E R+P A F Y+ + D+ +A D
Sbjct: 1027 AYLARWADVRVAVEAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP- 1085
Query: 545 DLVQAGKDHFSNFGYEEGR 563
H+ +G E R
Sbjct: 1086 ------LRHWLVWGIGENR 1098
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL + D+R + + + HY+ G EGR+P F Y+A D+ A
Sbjct: 980 FDEAFYLARWADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV 1039
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+G +H+ FG+ E R + F+ YL D+ + +H++ G
Sbjct: 1040 EAGQ--FHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADA----GIDPLRHWLVWG 1093
Query: 599 MKEGR 603
+ E R
Sbjct: 1094 IGENR 1098
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF Y+A D+ A V +G +H+ FG EGR T F+ + YL + D+
Sbjct: 979 AFDEAFYLARWADVRAAV--NAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVR 1036
Query: 581 NVFGSDR-SAAAQHYITHGMKEGRALG 606
+ + + +HY+ G +E R
Sbjct: 1037 VAVEAGQFHSGYEHYLAFGWREDRDPS 1063
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 31/110 (28%), Gaps = 12/110 (10%)
Query: 270 SVVGSSGNDV-VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-----------K 317
+ + SG +IG S + S G+D DG +G D F Y +
Sbjct: 254 TAITDSGESTRIIGGSGADTLAGSFGDDTLDGGAGDDIFLYGGGNTDNGRDLIQNLATGD 313
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
I R NA + ++ A + A
Sbjct: 314 IIRVSNADFSATTITAGNGTSVGLNEIQIATANGRTTLHIGTDAQADAAD 363
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGRALGI 607
F+ YL + D+ + + + +HY+ G EGR
Sbjct: 979 AFDEAFYLARWADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTP 1021
>gi|238623414|emb|CAS06701.1| alkaline metalloprotease [Pseudomonas fluorescens bv. G]
Length = 215
Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 17/209 (8%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+ + H +S ++ + + A A+ W+ V ++ F E + D
Sbjct: 8 LTYTFLTSASSSTMYKHGIS-GFSQFSAQQKAQAVLAMQSWADVANVVFTEKASGGDAHM 66
Query: 82 ISSNN--------GYVCTPRYDSRY--FMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
N + P + Y + + HEIGH
Sbjct: 67 TFGNYSGGQDGAAAFAYLPGTGAGYDGTSWYLINSSYTQNKNPDLNNYGRQTLTHEIGHT 126
Query: 132 LGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVS 186
LGL HPG YN G D Y D+ SVMSY+ ++ + S G Y + P++
Sbjct: 127 LGLAHPGDYNAGEGNPSYKDASYGQDTRGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMD 186
Query: 187 DIVAVQKIYGAPKGSL-GNNIYKIEVQQK 214
DI A+QK+YGA + G+ Y +++Q +
Sbjct: 187 DIAAIQKLYGANYSTRAGDTTYGLQLQHR 215
>gi|307320589|ref|ZP_07600003.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306893739|gb|EFN24511.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 473
Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats.
Identities = 97/455 (21%), Positives = 142/455 (31%), Gaps = 99/455 (21%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVL-----TTHRLSFDITELNPNAQEVARWAL-GEW 62
T + D LL W+ I Y L F T ++ + A +A+ +
Sbjct: 14 TGNNVVDSLLTGVAWAGT-ITYSFPTLAKSYAYGFEKYFGFTSVSAAQKNAALFAMEQSF 72
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYV-------CTPRYDSRYFMEINFDKADVWRYG-- 113
+ F ++ F + G Y ++ D+W
Sbjct: 73 GPAANDGF-SVEGFTNASFAPGSAGTATIRFAQTALAETSYAYLPALHAAAGDIWFGTAY 131
Query: 114 ---------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
G H LHE+GHALGL H + + DS SV+S
Sbjct: 132 AGTADDYRKPVAGNYAWHTHLHELGHALGLKHGHESDVYGATPA-----QYDSIEYSVLS 186
Query: 165 YF-----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD--- 215
Y S FG T M+ DI A+Q++YGA + GN +YK
Sbjct: 187 YRAYVGADTGGSYSYEQFGAPQTFMMGDIAALQEMYGADFTTNSGNTVYKWTPGSGATFV 246
Query: 216 ----------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------GYEK 258
+ TI+D GG D DLT +DL S+
Sbjct: 247 NGAVGISPGANRIFATIWDGGGKDTYDLTAYT-TALKVDLRPGKASTFSIDQLAWLDGGP 305
Query: 259 NMTIAQHTV-------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N A V IE+V G S D + GN A NV + +GND +G +G D
Sbjct: 306 NGGFAAGNVFNALLYRGDTRSLIENVKGGSAGDAITGNQATNVLWGYAGNDTLNGDTGND 365
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + S + + I N+ ++
Sbjct: 366 VLYGGSGSDRLYGGKGNDQIFGETGND----------------------------LIYAG 397
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
A + L G D F + + GRD FD
Sbjct: 398 AGADRLNGGSGTDSFVFKALWDSTAAASGRDTIFD 432
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 1/110 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + + + + G GND + G + N++ + +G D +G SG D+F + A
Sbjct: 357 TLNGDTGNDVLYGGSGSDRLYGGKGNDQIFGETGNDLIYAGAGADRLNGGSGTDSFVFKA 416
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRS 360
+ I + + D D DQ
Sbjct: 417 LWDSTAAASGRDTIFDFTPKSDRIDLSAIDANTSIAGDQAFLFAGTAAFG 466
>gi|317447641|emb|CBJ55051.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 243
Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 17/210 (8%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
+ + H +S + N + A A+ W+ V ++TF E + D
Sbjct: 1 TYTFLTSATQSTMNKHGIS-GFSXFNTQQKAQAALAMQSWADVANVTFTEKTSGGDGHMT 59
Query: 83 SSNN--------GYVCTPRYDSRYFMEINFDKADVWRYG--IGKGTILSHNALHEIGHAL 132
N + P + Y + + + HEIGH L
Sbjct: 60 FGNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTL 119
Query: 133 GLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSD 187
GL HPG YN G D Y D+ S+MSY+ ++ + S G Y + P++ D
Sbjct: 120 GLAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDD 179
Query: 188 IVAVQKIYGAP-KGSLGNNIYKIEVQQKDS 216
I A+QK+YGA + Y
Sbjct: 180 IAAIQKLYGANFNTRATDTTYGFNSNTGRD 209
>gi|163740056|ref|ZP_02147460.1| possible protease [Phaeobacter gallaeciensis BS107]
gi|161386687|gb|EDQ11052.1| possible protease [Phaeobacter gallaeciensis BS107]
Length = 483
Score = 170 bits (430), Expect = 7e-40, Method: Composition-based stats.
Identities = 91/414 (21%), Positives = 149/414 (35%), Gaps = 66/414 (15%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK 80
Y+ DV + ++P +++ A+ W++V +L +D+
Sbjct: 36 YYDYDPDFGDYDVGGEYLPEGATVNMDPAERQMMLQAVAAWNEVANLNLIPARGGTADLT 95
Query: 81 FISSNNGYVC--------------TPRYDSRYFMEINFDKADVWRYGIGK--GTILSHNA 124
F S++ R + +N D + GIG G +
Sbjct: 96 FASAHFANAGLFGFIVDFPDPSDLGTRPSPAGDLWLNNSNPDQYVPGIGPILGHTSWNTY 155
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASF-GYCAT 182
LHE+GHALGL HP G +VMSY P D+ + G+ T
Sbjct: 156 LHELGHALGLHHPNEMPENPTTPG----------QFTVMSYLPHPGDADLGQDLQGWALT 205
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI---------------YKIE------VQQKDSPFIQT 221
PM+ D+ AVQ +YGA + + Y + T
Sbjct: 206 PMLWDMQAVQALYGANTETRTDATVYLGAGDGRGGQAYQYGADGMTVRGGDGVARNVSLT 265
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT--------VIESVVG 273
I+D+GG DL+D + I + IDL +SSIG E N+ +A +IE G
Sbjct: 266 IWDAGGQDLIDASDI-ETNSRIDLRPGQYSSIGTLENNVAMAAAVRLDGRTLNLIEDAWG 324
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+D +IGN A N ++G D G+ G D S + + +A+
Sbjct: 325 GAGHDHLIGNGAANELLGNAGRDTLAGARGGDELSGGQGSDRLQGGKGHDALE----GGR 380
Query: 334 KQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+D L +RL D + + ++ + +I D +
Sbjct: 381 GRDTLKGGAGQDRLDGGDGNDRMAGGRGADVFVFSQGADVVIDFQRDDRIDMRA 434
>gi|260426907|ref|ZP_05780886.1| peptidase domain protein [Citreicella sp. SE45]
gi|260421399|gb|EEX14650.1| peptidase domain protein [Citreicella sp. SE45]
Length = 843
Score = 170 bits (430), Expect = 9e-40, Method: Composition-based stats.
Identities = 89/424 (20%), Positives = 133/424 (31%), Gaps = 46/424 (10%)
Query: 2 HNIKPVYTTERIA-------DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEV 54
+ YT E + + + + Y N
Sbjct: 106 DDGSGSYTLETAVAPPPDPLEAIDWGTQLPDNEVTYYFAPNGVTADGVTSEGYNAYEMAR 165
Query: 55 ARWALGEWSKVVDLTFEET--SIHSDIKFISSNN-------GYVCTPRYDSRYFMEINFD 105
A + +LTF E + +D F+ N GY+ P + N +
Sbjct: 166 FEAAFAMIATYTNLTFTEVNSAAAADFTFVLDTNELPSNLYGYMNPPGEPNPGVGVFNGN 225
Query: 106 KAD-VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG------GYPVYGVDNDYENDSF 158
D + G +HE+GH LGL HP G G + +
Sbjct: 226 NWDRSAGGSLDLGGDGFFTVIHELGHGLGLAHPHDTGGTSEVMTGVDGSSDTGTFSLNQG 285
Query: 159 LTSVMSYFMP------QDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV 211
+ +VMSY D + G + M DI +Q+ YGA GN +Y ++
Sbjct: 286 IFTVMSYNSSFVEGPVGTPAPDTNSGSMGSFMAFDIALLQQKYGANPNTGSGNTVYTLDD 345
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMT 261
D+ + IYD GG D + IDL S S+I G T
Sbjct: 346 ---DTSYWLAIYDVGGTDTI--VNDSNTAATIDLRAASLLFEAGGGGFASAIDGIAGGFT 400
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA TVIE+ G + D + GN+ NV +GND G G DT +
Sbjct: 401 IANGTVIENATGGAAGDTLSGNAIANVLVGLAGNDTIFGRRGHDTISGGTGNDSIDAG-L 459
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N I+ D + + L +A S + D+I + V
Sbjct: 460 GNDIVAGGIGADDMDGGAGRDTLTYAASGAAVNIRLGSSNNTGGDAEGDIITSFERVVGS 519
Query: 382 SMKH 385
Sbjct: 520 DFND 523
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 14/110 (12%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
Q++ GG+D + T G S SS+ I + + G+ G+D
Sbjct: 692 FQSLRGGGGNDTI--TGYSGAD-------PSSSSVRDI-----IVGDVGNDVLAGAGGDD 737
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G + N++ ++G+D+ +G +G DTF + S I F++ I
Sbjct: 738 TIDGGTGNDLIRGNAGDDILNGGTGFDTFIFGLTSETDTILDFQDDIDTL 787
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 5/128 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ TI G+D + G N+ L + + +V +
Sbjct: 665 DTIAANNVNAATIEGGAGNDRI-----IGGGNFQSLRGGGGNDTITGYSGADPSSSSVRD 719
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+VG GNDV+ G ++ +GND+ G++G D + + D
Sbjct: 720 IIVGDVGNDVLAGAGGDDTIDGGTGNDLIRGNAGDDILNGGTGFDTFIFGLTSETDTILD 779
Query: 330 ANEHKQDF 337
+
Sbjct: 780 FQDDIDTL 787
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 12/164 (7%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ G+D L GG+ + L E+ + I Q + + + G GND++
Sbjct: 534 TLEGGDGNDRL----YGGMNAQV-LRGEAGNDTITGYGGPNINQSGIGDVIDGGFGNDIL 588
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY------DANEHK 334
G++ + GND+ G++ D+ + + V
Sbjct: 589 AGSAGADTIIGGFGNDIIAGNANDDSLVGNNGKDTVTYANSDAGVNVLLNSASNSGGHAA 648
Query: 335 QDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
D L ER+ +D + N + +E A + +I
Sbjct: 649 GDILEGFERVVGSDFDDTIAANNVNAATIEGGAGNDRIIGGGNF 692
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 5/173 (2%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
D+G + LL+ G D+ + + G + + TIA + V +
Sbjct: 617 GNNGKDTVTYANSDAGVNVLLNSASNSGGHAAGDILEG-FERVVGSDFDDTIAANNVNAA 675
Query: 271 VV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +GND +IG GND G SG D + + N ++
Sbjct: 676 TIEGGAGNDRIIGGGNFQSLRGGGGNDTITGYSGADP--SSSSVRDIIVGDVGNDVLAGA 733
Query: 330 ANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D + + +R A I + + + S D I D+
Sbjct: 734 GGDDTIDGGTGNDLIRGNAGDDILNGGTGFDTFIFGLTSETDTILDFQDDIDT 786
>gi|258546038|ref|ZP_05706272.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258518695|gb|EEV87554.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 1549
Score = 169 bits (429), Expect = 1e-39, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 145/442 (32%), Gaps = 48/442 (10%)
Query: 16 HLLRDQYWSNYFIRYKPDVLT-----THRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
HL+ + + Y + + + R L ++ V++ F
Sbjct: 1106 HLIGHKPGQGLNVTYAFATSPVDKDEPGKAMSGFDTYSETQKTAIRTVLDHIAEHVNVKF 1165
Query: 71 EETSIHSDIKF----ISSNNGYVCTPRYDSRYFMEINFDKADVWRY--------GIGKGT 118
E ++ + F + + + F D +R G
Sbjct: 1166 SE-GNNATLNFYKHTMDTAETVGYGVYGGGVHLSAERFTADDAFRNDIPYRITGGDAIEY 1224
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SF 177
+ ALHEIGH LGL HP + D + SVMSY + + A S
Sbjct: 1225 YGWYAALHEIGHTLGLTHPFDH-AKKGDGRPDLSVAENRDTISVMSYVNGETIPLRAGSN 1283
Query: 178 GYCATPM------VSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQT-IYDSGGDD 229
Y P+ + D+ A+ +G G++ Y + KD+ I+D GG D
Sbjct: 1284 YYPEFPIAQNKLGIFDLAALHHSFGVNPNYHSGDDTYTFKEFNKDAVGNDIYIHDGGGLD 1343
Query: 230 LLDLTLIGGVKNYIDLNTESWS-------------SIGGYEKNMTIAQHTVIESVVGSSG 276
D + N IDL SW + M I T IE+ G +G
Sbjct: 1344 TFDASEQTLDLN-IDLTPGSWIYAGEKTAHLALNDDLTPTHGQMFIGYGTQIENAKGGTG 1402
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + GNSA+N F G+D DG +G D + + + I + K D
Sbjct: 1403 NDTIKGNSADNHLFGFDGDDHLDGGAGNDQLEGGRGADTLTGGKGADTFIFASPLDGKAD 1462
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ D F + + ++ + L+ D + + Y+ E
Sbjct: 1463 TILD---FNFNEGDVLQLDHNIFTALQSGTLAADQFVLGKAAQDANDHLIYDRATGE--- 1516
Query: 397 ITFDSYLYLGSYDDLRNVFGSD 418
+ +D + G++
Sbjct: 1517 LAYDPDGSGAAAAVTIARLGAN 1538
>gi|255263135|ref|ZP_05342477.1| serralysin [Thalassiobium sp. R2A62]
gi|255105470|gb|EET48144.1| serralysin [Thalassiobium sp. R2A62]
Length = 365
Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats.
Identities = 85/348 (24%), Positives = 150/348 (43%), Gaps = 45/348 (12%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTP----------RYDSRYFMEINFDKADVW----- 110
+ F + S+ +D+ F + G + ++ + + W
Sbjct: 3 TGIHFVQ-SVTADLVFDDEDLGNAYASFNLDNMGGTNANGTGLIVDASINIGKDWIEDDW 61
Query: 111 --RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY---GVDNDYENDSFLTSVMSY 165
G+ + +HEIGHALGL H G YNG G D + NDS+ SVMSY
Sbjct: 62 TLNDGVDLDSYSFQTYIHEIGHALGLGHAGPYNGSADYTQFEGGDAAFINDSWQMSVMSY 121
Query: 166 FMP-QDSMMDASFGYCATPMVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQK--------- 214
F +++ +DA+F Y TPM++DI A+ ++Y + + IY +
Sbjct: 122 FSQTENTFIDATFAYVVTPMLADIQAIHQLYNTSGNIRDTDTIYGVGSTAGGYYDTVLGL 181
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+P T+ D GG D +D+++ G I+LN S SSI G NM+I T IE+VV
Sbjct: 182 ANPVTFTVVDDGGVDTIDVSVFG-SDQMINLNGNSISSIAGNVGNMSIMDGTEIENVVMG 240
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+DVV N N + +G D+ + + + + NA ++ +
Sbjct: 241 SGDDVVYANDVGNDNYGGAGTDIVS--------YIASDAAVTVNLGAGNA----NSGYAQ 288
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L+ ++ ++ ++ + ++++ + + G D+ E+
Sbjct: 289 GDTLTGIQGVQGSEYGDILIGASVVNLMDGGDGDDSISVGGGDDIVEA 336
>gi|170744798|ref|YP_001773453.1| peptidase metallopeptidase [Methylobacterium sp. 4-46]
gi|168199072|gb|ACA21019.1| peptidase metallopeptidase [Methylobacterium sp. 4-46]
Length = 641
Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats.
Identities = 95/391 (24%), Positives = 139/391 (35%), Gaps = 78/391 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDI------TELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
W N + + + + AQ + AL WS + D+ F+E +
Sbjct: 49 WYNDDKGSPIAATSKAGTPGGVVSYAFDSSVGVEAQAAYKAALTLWSDIADIKFQEVAWS 108
Query: 77 SDIKFISSN------------NGYVCTPRY-----------DSRYFMEINFDKADVWRYG 113
+ SN NGY R ++IN D
Sbjct: 109 AAASIQISNTPEANGDTFVPSNGYSVPGRGVTDLPTQMAPHTRGGAVQINVSADDAAFKI 168
Query: 114 IGKGTILSH-NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G +HE GHALGL H G YNG Y G + Y D+ S+MSY PQDS
Sbjct: 169 SSIGAPSQIGTVVHETGHALGLGHAGRYNGSYDASGQFSAY--DTQSWSIMSYIDPQDSA 226
Query: 173 MDASFGYC-------------------ATPMVSDIVAVQKIYGAPKGSL--GNNIYKIEV 211
Y +PM+ DI+A Q++YGA K S G +Y
Sbjct: 227 APYFDKYPVQGTQWTSYYKGAEFKGGAQSPMMLDILASQRLYGASKSSTFSGGQVYGFNS 286
Query: 212 QQKDSPF-----------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG---YE 257
D+ I T+Y+SG ++ LDL+ + I+LN S+SS
Sbjct: 287 NISDASRLLFDFSVNRVPIVTLYNSGTNNTLDLSGF-DTPSTINLNPGSFSSASASGLLV 345
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ IA +T I+ VG +G+D I N + G + Y
Sbjct: 346 NNIGIAYNTRIDKAVGGAGDDTFILNGDGDTIDGGGG---------TNRVVIKGDRANYS 396
Query: 318 IYRFENA-IIVYDANEHKQDFLSDVERLRFA 347
+ R A V + D L++V+ + F
Sbjct: 397 VERTGAASATVTNTATGAIDRLTNVQDITFD 427
>gi|149186560|ref|ZP_01864872.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Erythrobacter sp. SD-21]
gi|148829787|gb|EDL48226.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Erythrobacter sp. SD-21]
Length = 1933
Score = 165 bits (417), Expect = 3e-38, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 130/315 (41%), Gaps = 30/315 (9%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSD----IKFISSNNGYVCTPRYDSRYFMEINF 104
N+ ++ R A+ WS V ++TF+E S S+ ++I S Y + + +
Sbjct: 55 TNSDDMFRLAIDRWSAVANITFQEASDPSENPDWTEYIVSGQNYGYGAYHYTPGGPGGAY 114
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND-----SFL 159
+ V +G + LHEIGHALGL H +G P GV + + L
Sbjct: 115 NAYYVNTATNVEGGYGLYTFLHEIGHALGLNHTFETDGDGPFPGVSGSNDPGDNNLSTGL 174
Query: 160 TSVMSYF--MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDS 216
SVM+Y P + ++ GY ATPM DI A+Q IYGA + G+++Y +
Sbjct: 175 YSVMAYVFQNPDYASGYSNIGYAATPMAFDIAAIQAIYGANMTTATGDDVYYLPPSTGTQ 234
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW----------------SSIGGYEKNM 260
F + I+D G D + + IDL + S G
Sbjct: 235 AF-ECIWDVSGTDTIS-AELSDGGTTIDLRAATLLNEVGGGGWLSYQDGSSGAGVVYGGY 292
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TIA VIE+ VGS+ D + GN NV SG+D G G D+ A +
Sbjct: 293 TIANGVVIENAVGSTYADTITGNDEANVLDGGSGDDTIFGLGGDDSIDGGAGADAMAGGT 352
Query: 321 FENAIIVYDANEHKQ 335
++ V +A +
Sbjct: 353 GDDTYYVDNAGDTVT 367
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 6/189 (3%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ ++ + GGDD + L G + + + G + N T+
Sbjct: 1732 DTLWGDAGTDRLYGGNDADTLHGGDD--NDLLFGQAGDDVVNGDGGDDLVQGNKGNDTLD 1789
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++V G +GND + G + N+V G D G G DTF + + K +
Sbjct: 1790 GGADNDTVNGGAGNDTLFGGTGNDVLIGGWGVDTMTGGEGADTFSFTQSGHSGKFASVAD 1849
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
II + + E LS ++ + ++ + +L G++ +
Sbjct: 1850 TIIDFSSAEGDLIDLSAIDAIS----GGSDDAFTFIGDAAFSGTAGELRAYAGENGLIVV 1905
Query: 384 KHFYEFGLS 392
G +
Sbjct: 1906 GDIDGDGAA 1914
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 253 IGGYEKNMTIAQHT---VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + N I T I +++G SG+D ++G + +++ +G D G +G DT+
Sbjct: 657 LSGGDNNDVIYGGTAAETINNLIGGSGDDTLVGGNGDDLLDGGTGADDMTGGAGNDTYRV 716
Query: 310 YAPSYLYKIYRFENAIIVYDA 330
+ E V
Sbjct: 717 DDANDTITELDGEGTDTVETT 737
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 81/232 (34%), Gaps = 25/232 (10%)
Query: 175 ASFGYCATPMVSDIVA----VQKIYGAPKGSLGNNIYK-------IEVQQKDSPFIQTIY 223
AS Y +DI+ +IYG G + +Y I + D+ + Q +
Sbjct: 1648 ASIEYLVGSAFADILTGSNDANQIYG---GGAADTVYGGIGNDLLIGEEGNDTLYGQASW 1704
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ D D TL+GG L ++ G + +++ G ND++ G
Sbjct: 1705 DTIRGDAGDDTLVGGNGGDALLGGTGLDTLWGDAGTDRLYGGNDADTLHGGDDNDLLFGQ 1764
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDFL 338
+ ++V G+D+ G+ G DT A + F D +
Sbjct: 1765 AGDDVVNGDGGDDLVQGNKGNDTLDGGADNDTVNGGAGNDTLFGGTGNDVLIGGWGVDTM 1824
Query: 339 SDVE-----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ E + +V +I++++++ DLI + D
Sbjct: 1825 TGGEGADTFSFTQSGHSGKFASV-ADTIIDFSSAEGDLIDLSAIDAISGGSD 1875
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 3/179 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + GDD L +G + + N++ H
Sbjct: 1100 RDNDTLDGGAGADELIGGQGDDTYYLDNVGDIVTEYEGEGNDTIVTTITTVNLSDDGHVE 1159
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ SG+ + GNSA NV S+ ND DG +G D Y + + +V
Sbjct: 1160 NLTAGDDSGDYALTGNSAVNVITGSANNDTLDGGAGADRLVGGLGDDTYHVDDAND--VV 1217
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-TASYEDLIQVIGQDVFESMKH 385
+ + D + D ++++ + Y + I V G D E H
Sbjct: 1218 SEGVDEGTDRVIATASQYALDANVENLEAVTDTAFTYEGNDLANDITVTGADEGEIFGH 1276
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 11/125 (8%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPS 313
A ++++ G GND++ N+ + +G+D+ DG +G DT Y
Sbjct: 1565 AFEGSMDTLFGGFGNDILYAVIGNDSLYGGAGFDMLHSGAGDDLLDGGNGNDTANYANAV 1624
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + A D D L+ +E L + + + + + +
Sbjct: 1625 AGVTVDLLDAAA--QDTIGAGVDTLASIEYLVGSAFADILTGSNDANQIYGGGAADTVYG 1682
Query: 374 VIGQD 378
IG D
Sbjct: 1683 GIGND 1687
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVV---IGNSANNVFFESSGNDVFDGSSGLDTFF 308
S GY T+ + + G + ++ + G++ +++ +G D DG +G D
Sbjct: 904 SAVGYSTRNTLYGGDDNDQIYGGASSETINEIYGDAGDDLLVGGAGADTLDGGTGADAMI 963
Query: 309 YYAPSYLYKIYRF 321
A Y +
Sbjct: 964 AGAGDDYYTVDDA 976
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 48/166 (28%), Gaps = 23/166 (13%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ GN +N ND DG +G D Y + + + Y+ +
Sbjct: 1086 VLTGNDLDNTIIGERDNDTLDGGAGADELIGGQGDDTYYLDNVGDIVTEYEGEGNDTIVT 1145
Query: 339 SD----------VERLRFADQCID--SVNVKQRSILEYTASYEDLIQVIGQDV------- 379
+ VE L D D +++ +A+ + L G D
Sbjct: 1146 TITTVNLSDDGHVENLTAGDDSGDYALTGNSAVNVITGSANNDTLDGGAGADRLVGGLGD 1205
Query: 380 ----FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ G+ EG D + ++ N+ A
Sbjct: 1206 DTYHVDDANDVVSEGVDEGTDRVIATASQYALDANVENLEAVTDTA 1251
>gi|163740883|ref|ZP_02148276.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
2.10]
gi|161385874|gb|EDQ10250.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
2.10]
Length = 409
Score = 165 bits (417), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/300 (23%), Positives = 107/300 (35%), Gaps = 43/300 (14%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN--- 123
++ F E SD + + Y M D W +L +
Sbjct: 77 NVDFVEVQGSSDPDLNLGSVTIPGSTVGIGGYSMSFRGDDITRWDGYAVFDNMLDMSQDN 136
Query: 124 ----ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
LHE+GHALGL H N E DS L SVMSY + D+
Sbjct: 137 RESLILHELGHALGLQHTHDSNLPE---------EYDSNLYSVMSYRENPLNGQDSD--- 184
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
M+ D++A+Q I+GA + N Y+ + + ++D+GG D + +
Sbjct: 185 --AMMLFDVLALQDIWGAADFNTSNTTYR----GSRTDTVDVVWDTGGTDTFNASNRTNA 238
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+DL +SS + ++TIAQ IE+ +G G D + GN ANN G D
Sbjct: 239 -VTLDLREMHFSSFDA-DSDVTIAQGVTIENAIGGRGRDRITGNDANNRLVGGGGRDTLR 296
Query: 300 GSSGLDTFFY----------------YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G G D ++ A + A + D + D +
Sbjct: 297 GDGGNDALNGNSGVDLLVGGGGNDRLNGAGGNDRLVGNSGADLFIFARKGGNDTIRDFQD 356
>gi|116250562|ref|YP_766400.1| rhizobiocin [Rhizobium leguminosarum bv. viciae 3841]
gi|115255210|emb|CAK06284.1| putative calcium binding RTX Zn-metalloprotease [Rhizobium
leguminosarum bv. viciae 3841]
Length = 1585
Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats.
Identities = 108/509 (21%), Positives = 167/509 (32%), Gaps = 98/509 (19%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWAL----GE 61
T ++ D L W P T++ S + + + + AL
Sbjct: 12 SLTGDQKVDGLFSGTAWDGTITYAFPTTATSYAYSGEKDYAFSSISSQQQSLALFFMEES 71
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYV-------CTPRYDSRYFMEINFDKADVWRYG- 113
+ + F ++ F++ + G P Y I DVW
Sbjct: 72 YGNAANDGF-SVEGFTNANFVAGSAGTATVRFAQSSLPPTAWAYTPIIGGHGGDVWFGTE 130
Query: 114 ----------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
G SH HE+GHALGL H GY + DS ++M
Sbjct: 131 YAGTEDDLRFPRFGNYASHTLAHELGHALGLKHAQE---GYNLNLTVVPGAYDSLEYTIM 187
Query: 164 SYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK---- 214
+Y G T M+ DI A+Q++YGA + G+ +YK Q
Sbjct: 188 TYRTFVGDNLYGYKYEHDGAPQTFMMLDIAALQEMYGADYTTNSGDTVYKWNPNQGITYV 247
Query: 215 ---------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--------SIGGYE 257
+ TI+D GG D DL+ IDL +S +GG
Sbjct: 248 NGVAAITPAANRIFATIWDGGGIDTYDLSAYT-TALKIDLRAGGYSVFSQSQLADLGGGP 306
Query: 258 KNMTIAQHTV-------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N A+ V IE+V SGND ++GN A+N + ++GND G SG
Sbjct: 307 NN-GYARGNVFNALLYHDNVASLIENVRAGSGNDTLVGNEADNALWGNAGNDTLTGDSGN 365
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDAN-------EHKQDFL---------SDVERLRFAD 348
DT A + IV DAN + D + ++VE L +
Sbjct: 366 DTLDGGAGIDKMSGGMGNDVYIVDDANDAVIENVDEGTDTVRTTGSYTLSTNVENLVYIG 425
Query: 349 QCIDSVNVKQR----------SILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
S L+ A + LI G D + + + G D
Sbjct: 426 TFGFSGTGNTAANVITGGTGIDWLDGKAGADTLIGGAGNDTYIVDDLGDVVVEAADSGAD 485
Query: 397 I--TFDSYLYLGSYDDLRNVFGSDRGAAA 423
T + L ++ +++ + G +
Sbjct: 486 TIRTDLAAYSLADNANVEDLYFTGSGNST 514
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 24/192 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y ++ + G D + TL L + + N
Sbjct: 972 GGAGNDTYIVDNAGDLVTEAAEV----GIDTVRTTLAAYT-----LGANVENLLYTGSAN 1022
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T + + ++ G GND + G + N+ +GND G G DT +Y +
Sbjct: 1023 FTGTGNALANTITGGVGNDTLDGGTGNDTLIGGAGNDTLIGGGGSDTMSGGTGDDIYVVD 1082
Query: 320 RFENAIIVYDANEHKQD------------FLSDVERLRFAD-QCIDSVNVKQRSILEYTA 366
+ ++ +A D L +VE L + +I+
Sbjct: 1083 SATD--VINEAVSAGTDEIRTALAAYSIAALINVENLTYTGSASFIGTGNALANIITGGI 1140
Query: 367 SYEDLIQVIGQD 378
+ L G D
Sbjct: 1141 GNDTLNGGGGAD 1152
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 7/158 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T+ GDD DL + T S G +
Sbjct: 1142 NDTLNGGGGADTLIGGAGDDTYIVDNIGDLVTEAADAGTDTVRTTLASYTLGSDVENLTN 1201
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T + G+ ++V+ G +A + GND +G +G D + +Y I
Sbjct: 1202 IGTAAFTGTGNDLDNVITGGAAIDTLSGGVGNDTLNGGAGADRLIGGEGNDIY-IVDNAG 1260
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
++ ANE +++ A + + +
Sbjct: 1261 DVVTEAANEGIDTVRTNLSAHTLAANVENLTYIGTAAF 1298
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/250 (14%), Positives = 72/250 (28%), Gaps = 25/250 (10%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQD-SMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+ V + + D+ T++ SY + + + T +D+ + GA
Sbjct: 654 DNASDVVTENANEGIDTVRTTLASYMLGSNVENLTYMGAVAFTGTGNDLANTIR--GAAS 711
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + GDD + + V + + +
Sbjct: 712 ADTLD----------GKAGADILIGGAGDDTYIVDNLADVVTE---RPNEGADLVKTTLS 758
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ V + +G+ GN N +GND DG +G D A + +Y +
Sbjct: 759 SYTLTNNVEKLTFIGTGDFAGTGNGLANTINGGAGNDTLDGGAGNDALDGGAGNDIYVLD 818
Query: 320 RFENAIIVYDANEHKQDF--------LSDVERLRFA-DQCIDSVNVKQRSILEYTASYED 370
+ I + + L +VE L + + + A +
Sbjct: 819 SASDVIKDSAGTDEIRTVLVAFSIAALVNVENLTYTRSANFTGTGNAFANTITGGAGNDT 878
Query: 371 LIQVIGQDVF 380
L G D
Sbjct: 879 LDGGAGADSL 888
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 61/371 (16%), Positives = 111/371 (29%), Gaps = 55/371 (14%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
R AL +S + E + FI + N AD G G
Sbjct: 1100 RTALAAYSIAALINVENLTYTGSASFIGTGNALANIITGGIGNDTLNGGGGADTLIGGAG 1159
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
T + N + D D+ T++ SY + D
Sbjct: 1160 DDTYIVDNI-------------------GDLVTEAADAGTDTVRTTLASYTLGSDVENLT 1200
Query: 176 SFGYCA-TPMVSDI-------VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ G A T +D+ A+ + G N + I D+ G
Sbjct: 1201 NIGTAAFTGTGNDLDNVITGGAAIDTLSGGVGNDTLNGGAGADRLIGGEGNDIYIVDNAG 1260
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D + + G +L+ + + +N+T T + G+ ++++IG A +
Sbjct: 1261 DVVTEAANEGIDTVRTNLSAHT---LAANVENLT-YIGTAAFTGAGNLLDNIIIGGVAAD 1316
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-------- 339
++GND G +G DT +Y + + IV++ D +
Sbjct: 1317 KLMGAAGNDTLIGGAGADTMLGGTGDDIYVVDIATD--IVFENANEGTDTVRTALVSYTL 1374
Query: 340 --DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQD-----------VFESMKH 385
+VE L + + + A + L G D + ++
Sbjct: 1375 GNNVENLTYTGSASFTGAGNALANTITGGAGNDVLNGGTGADSLIGGAGNDTYIVDNAGD 1434
Query: 386 FYEFGLSEGRD 396
+EG D
Sbjct: 1435 IVTEVANEGTD 1445
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 10/135 (7%)
Query: 260 MTIAQHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
++ +E++ S + GN+ N +GNDV +G +G D+ A + Y +
Sbjct: 1370 VSYTLGNNVENLTYTGSASFTGAGNALANTITGGAGNDVLNGGTGADSLIGGAGNDTYIV 1429
Query: 319 YRFENAII--------VYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYE 369
+ + AN ++VE L + +++ + +
Sbjct: 1430 DNAGDIVTEVANEGTDTVRANLASYTLAANVENLTYIGTGPFAGEGNALNNVIVGGSGFN 1489
Query: 370 DLIQVIGQDVFESMK 384
L G D
Sbjct: 1490 ALTGGAGDDTLTGGA 1504
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 74/214 (34%), Gaps = 5/214 (2%)
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + D+ T+++SY + +++ + ++ A+ + I G + N
Sbjct: 1357 NANEGTDTVRTALVSYTLG-NNVENLTYTGSASFTGAGNALANTITGGAGNDVLNGGTGA 1415
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + I D+ GD + ++ G +L S++ E I
Sbjct: 1416 DSLIGGAGNDTYIVDNAGDIVTEVANEGTDTVRANL--ASYTLAANVENLTYIGTGPFA- 1472
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G++ N+V++G S N +G+D G + D F Y I F +D
Sbjct: 1473 -GEGNALNNVIVGGSGFNALTGGAGDDTLTGGAAADVFIYSLNWGHDTITNFVATGSAHD 1531
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+D E L A + V I
Sbjct: 1532 TIRIDHSIFADWESLFAASSQYGNDTVVTADIDN 1565
>gi|227820120|ref|YP_002824091.1| protease [Sinorhizobium fredii NGR234]
gi|227339119|gb|ACP23338.1| putative protease [Sinorhizobium fredii NGR234]
Length = 509
Score = 164 bits (414), Expect = 6e-38, Method: Composition-based stats.
Identities = 103/502 (20%), Positives = 162/502 (32%), Gaps = 86/502 (17%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF----DITELNPNAQEVARWALGE-WS 63
T + D LL WS P + + ++ AR+A+ +
Sbjct: 14 TGNELVDGLLSGYAWSGTITYAFPTSASAYNYGPEKYDGFNSISQAQINTARFAMVVGYG 73
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCT-------PRYDSRYFMEINFDKADVWRYG--- 113
+ F ++ +F + + P Y D+W
Sbjct: 74 SAANDGF-SVEGFTNARFAAGSASSATIRFAQSNEPDTAYAYMPGNYSQAGDIWFGTDYI 132
Query: 114 --------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
G H LHE+GHALGL H G + + DS S+M+Y
Sbjct: 133 GTVADYRKPVAGNYAWHTLLHELGHALGLKHGHEQEGAFEPLPS----QYDSIEYSIMTY 188
Query: 166 FMPQDSMMDA--SFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD------- 215
A +G T M++DI A+Q++YGA + GN +YK
Sbjct: 189 RGYVGGYGYAYEQYGAPQTFMMADIAALQEMYGADFSTNSGNTVYKWTPGSGATLVNGAV 248
Query: 216 ------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------GYEKNMTI 262
+ TI+D GG D DLT + IDL S+ G N
Sbjct: 249 GIAPGANRIFATIWDGGGSDTYDLTAY-KIALKIDLRPGKVSTFSADQLAWLGGGSNDGY 307
Query: 263 AQHTV-------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
A + IE+V+G SGND + GN A N + +GND+ +G +G DT +
Sbjct: 308 AAGNIFNALLYHGDTRSLIENVLGGSGNDAITGNQAANKLYGYAGNDIMNGDTGHDTLYG 367
Query: 310 YAPSYLYKIYRFENAIIVYDANEH-----KQDFL---SDVERLRFADQCIDSVNVKQRSI 361
S +A++ N+ D L S + F +V R
Sbjct: 368 GVGSDKLYGSSGNDALVGDAGNDALYGGTGADRLYGGSGNDTFAFRLLAESTVGATGRDT 427
Query: 362 LEYTASYEDLIQVIGQDVFESMKH----FYEFGLSEGRD-------ITFDSYLYLGSYDD 410
+ A+ + + + F G++ D+Y+Y D
Sbjct: 428 IYDFAASDRINVSAIDANSTASGDQAFTFVGTAAFSGKNGELRYDRAASDTYIYGDVNGD 487
Query: 411 LRNVFGSDRGAAARHYITHGVK 432
+ F A + G
Sbjct: 488 KKADFAIRLDDAVT--LQKGYF 507
>gi|84686280|ref|ZP_01014175.1| protease PrtA [Maritimibacter alkaliphilus HTCC2654]
gi|84665807|gb|EAQ12282.1| protease PrtA [Rhodobacterales bacterium HTCC2654]
Length = 415
Score = 163 bits (413), Expect = 8e-38, Method: Composition-based stats.
Identities = 72/366 (19%), Positives = 131/366 (35%), Gaps = 34/366 (9%)
Query: 37 THRLSFDITELNPNAQE---VARWALGEWSKVVDLTFEETSIHS----DIKFISSNNGYV 89
+ + R AL +++ F E S + D+ F ++G
Sbjct: 50 NASGAVAFSGFEAWQLSEILAVRRALAHIETFLNVDFVEVSATTNPDMDLAFAELDDGTA 109
Query: 90 CTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ D+ D V+ T LHEIGHALGL H + +
Sbjct: 110 GYGGWKADTSGSQITAVDSFAVFDRDFDIVTDRYGVVLHEIGHALGLRHTFDSDLLPDRF 169
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
D+ S+M+Y S + + V D++A+Q I+GA + + + Y
Sbjct: 170 --------DTNKWSLMAYDRHPGSGVASD-----AMGVFDVLALQDIWGAARYADDDTTY 216
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ TI+D+GG D D T + +DL ++S G +++ +A TV
Sbjct: 217 ----VGSRTATTDTIWDTGGIDTFDATG-TPHRVKLDLREGAFSRFGPAYEDVVVAFGTV 271
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+ G +GND + GN A+N + G+D+ +G G D + + + I
Sbjct: 272 IENSRGGAGNDRLAGNPASNRIEGNQGDDMLNGKQGDDILLAGDRDDRLRGGKGADWI-- 329
Query: 328 YDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L + F + + + + + +++
Sbjct: 330 --NGGPGDDILRGGPGADTFVFNGGRDEIRDFQDDFDRIKVQGFGSVAEILSDTEQRGAD 387
Query: 385 HFYEFG 390
+ + G
Sbjct: 388 IWIDLG 393
>gi|332705045|ref|ZP_08425130.1| matrixin [Lyngbya majuscula 3L]
gi|332356222|gb|EGJ35677.1| matrixin [Lyngbya majuscula 3L]
Length = 1485
Score = 163 bits (413), Expect = 8e-38, Method: Composition-based stats.
Identities = 86/397 (21%), Positives = 148/397 (37%), Gaps = 72/397 (18%)
Query: 14 ADHLLRDQYWSNYFIRYKP----DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
AD LL +W I Y + + + ++E++ ++ R L + + +
Sbjct: 8 ADSLLDHHHWDTNTITYSFYNNANSGSYYGPETGVSEISEKTKDNIRSILETLERYIAVD 67
Query: 70 FEETSIHSD----IKFISSNN-GYVCT-------------PRYDSRYFMEINFDKADVWR 111
F E + + ++++ S+ GY T + +D
Sbjct: 68 FHEVADTATDYGLLRYMVSDGPGYAYTYLPEGFNTNVGNWSDVAGDVHLNQAYDTTGNNG 127
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ G +HEIGH+LGL HP Y +G + D+ +VMSY
Sbjct: 128 FADDPGNHGYMTVIHEIGHSLGLKHPNPYE--DNDHGPFLPFNEDNTTNTVMSY------ 179
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP-------------F 218
+ + TPM+ DI A+Q IYGA + + G+ Y + +
Sbjct: 180 --NFAGKSAITPMIYDIQALQSIYGAREYNHGDTTYSFDSVNYYTDGSEYYGKTKPIEEI 237
Query: 219 IQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESW---------------SSIGGYEK--- 258
QT++DSGG + LD + + V+ + D+N S G E
Sbjct: 238 KQTLWDSGGVNTLDFSNLTFVEKGYHFDMNEGGILTTQEAYNDSSYKARSDDSGREYVTS 297
Query: 259 --NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-----SSGNDVFDGSSGLDTFFYYA 311
IA TV E+++ S+ ND +I NSA N+F S+G+D+ G + LDT
Sbjct: 298 EFGTAIAFGTVFENLINSNSNDYIIANSAANIFSGYELEISTGDDLIKGWNYLDTLDLSN 357
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
++ ++ L D + +D
Sbjct: 358 YAFSSVTQTQSGDDLILGLGSDSSITLKDYHTVSESD 394
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 22/191 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI---DLNTESWS------SIGG 255
+ + T++ G D L D +L GGV N D+ ++ ++ G
Sbjct: 1179 NDFLRGTWGNDTLHGGSGHDTLGGGQGDDSLSGGVGNDRIMGDVGNDTLEGSSGEDNLSG 1238
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I T +S+ G G D + G S N+ GND +G SG D+ +
Sbjct: 1239 GSGDDLIEAGTEDDSLRGGKGGDTLKGGSGNDYLRGDDGNDSLEGGSGNDSLIGASGDDT 1298
Query: 316 YKI--------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
N ++ + + D D + L + +L+
Sbjct: 1299 LDGGSDHDTLKGSSGNNYLIGGSGDDLLDGGRDHDSLEGGSGNDYLIGGSGDDLLDGGQH 1358
Query: 368 YEDLIQVIGQD 378
++ L G D
Sbjct: 1359 HDFLKGGSGND 1369
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 8/136 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ + +++ G SG+D ++G N+ + GND G SG DT
Sbjct: 1148 GNRNNDTLIGGSGHDTLSGGSGDDSLVGGFGNDFLRGTWGNDTLHGGSGHDTLGGGQGDD 1207
Query: 315 LYKIYRFENAIIVYDAN-----EHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTA 366
+ I+ N +D LS + + + K L+ +
Sbjct: 1208 SLSGGVGNDRIMGDVGNDTLEGSSGEDNLSGGSGDDLIEAGTEDDSLRGGKGGDTLKGGS 1267
Query: 367 SYEDLIQVIGQDVFES 382
+ L G D E
Sbjct: 1268 GNDYLRGDDGNDSLEG 1283
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 8/162 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G N + ++ G + ++ + + G+ GND + G S ++
Sbjct: 1143 DDRLWGNRNNDTLIGGSGHDTLSGGSGDDSLVGGFGNDFLRGTWGNDTLHGGSGHDTLGG 1202
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-----QDFLS---DVER 343
G+D G G D + + E+ + ++ D L +
Sbjct: 1203 GQGDDSLSGGVGNDRIMGDVGNDTLEGSSGEDNLSGGSGDDLIEAGTEDDSLRGGKGGDT 1262
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
L+ LE + + LI G D +
Sbjct: 1263 LKGGSGNDYLRGDDGNDSLEGGSGNDSLIGASGDDTLDGGSD 1304
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 13/169 (7%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GY 256
G++ + ++ + GDD LD G ++ L S ++ G
Sbjct: 1269 NDYLRGDD---GNDSLEGGSGNDSLIGASGDDTLD-----GGSDHDTLKGSSGNNYLIGG 1320
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + +S+ G SGND +IG S +++ +D G SG D + +
Sbjct: 1321 SGDDLLDGGRDHDSLEGGSGNDYLIGGSGDDLLDGGQHHDFLKGGSGNDYLIGGSGNDTL 1380
Query: 317 KIY----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
R I V F+ + F D+ + +
Sbjct: 1381 NGVGNGSRGNGEIDVLVGGAWSDTFILGDDHRAFYQGKGDNDYAEIYDL 1429
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 1/110 (0%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D + GN N+ SG+D G SG D+ + + + N + +
Sbjct: 1139 GGHGDDRLWGNRNNDTLIGGSGHDTLSGGSGDDSLVGGFGNDFLR-GTWGNDTLHGGSGH 1197
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L + LE ++ ++L G D+ E+
Sbjct: 1198 DTLGGGQGDDSLSGGVGNDRIMGDVGNDTLEGSSGEDNLSGGSGDDLIEA 1247
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 10/114 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G ++ + G ++ + + ND G SG DT + + F N +
Sbjct: 1126 KSIRGDRYDNRLEGGHGDDRLWGNRNNDTLIGGSGHDTLSGGSGDDSL-VGGFGNDFL-- 1182
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L + L + ++ +G D E
Sbjct: 1183 -RGTWGNDTLHG------GSGHDTLGGGQGDDSLSGGVGNDRIMGDVGNDTLEG 1229
>gi|317447637|emb|CBJ55048.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 203
Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
+ + H +S ++ N + A A+ W+ V ++TF E + D
Sbjct: 1 YTFLTSATQSTMNKHGIS-GFSQFNTQQKAQAALAMQSWADVANVTFTEKASGGDGHMTF 59
Query: 84 SNN--------GYVCTPRYDSRYFMEINFDKADVWRYG--IGKGTILSHNALHEIGHALG 133
N + P + Y + + + HEIGH LG
Sbjct: 60 GNYSXGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLG 119
Query: 134 LMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDI 188
L HPG YN G D Y D+ S+MSY+ ++ + S G Y + P++ DI
Sbjct: 120 LAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDI 179
Query: 189 VAVQKIYGAPKGSLG-NNIYKIEV 211
A+QK+YGA + + Y
Sbjct: 180 AAIQKLYGANLSTRATDTTYGFNS 203
>gi|329850545|ref|ZP_08265390.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840860|gb|EGF90431.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1439
Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/419 (19%), Positives = 138/419 (32%), Gaps = 89/419 (21%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEV 54
+ + ++ ++ D +L W + + V + + N Q
Sbjct: 14 DGRYEFSHDQDIDAVLIGSRWDITNLTFSFPVSGSVYQPGYDSPGFVTNHIAFNAMQQTA 73
Query: 55 ARWALGEWSKVVDLTFEETSIHSD----IKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
R LG+ + L+F E + S+ ++F +++ V T F + DVW
Sbjct: 74 VRLLLGQVAGFTLLSFTEITETSNTHAVLRFSQTSDSGVPT---AEGRFPGPDVGDGDVW 130
Query: 111 RYGIG---------KGTILSHNALHEIGHALGLMHPG-SYNG-------------GYPVY 147
G LHE GH +GL H Y P Y
Sbjct: 131 VGTSTDQLAYTVPQSGNWGMDMLLHETGHTMGLKHGHSDYTDFDLTIDGHVSTFMPGPRY 190
Query: 148 GVDN-DYENDSFLTSVMSYFMPQD----SMMDASFGYCATPMVSDIVAVQKIYGAP-KGS 201
G ++DS SVM+Y + + + T M +DI A+Q +YGA +
Sbjct: 191 GTQALPTDHDSSAYSVMTYRSDPGNVMMTPQSSLYDMAQTYMQNDIAALQYLYGANFNVN 250
Query: 202 LGNNIYKIEVQQKD------------------SPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+++Y + + +TI+D GG+D +L+ +
Sbjct: 251 ATDSVYTFDTSTGEMFINGVGQGIPTRPDGDVGKIFRTIWDGGGNDTYNLSN-SFRNQTV 309
Query: 244 DLNTESWSSIGGYE----------------KNMTIAQ------HTVIESVVGSSGNDVVI 281
DLN W+ + N A+ ++IE+V +G+D +
Sbjct: 310 DLNPGGWTIFNDRQLADLRGGDPDVTVNAPGNFANARLYNFDTRSLIENVTTGAGHDTIY 369
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN+A N G+D+ G G DT + + QD L
Sbjct: 370 GNTARNHIQAGGGDDLVYGGDGWDTLEGGFSNDTLE----GGDGYDRLNGGDGQDSLIG 424
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 81/217 (37%), Gaps = 32/217 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G LG++ Y + D+ D + + G Y + S+ G Y +
Sbjct: 882 GGLGDDTY--------------VVDNSNDKVFEAAGEGTDALY---TSVSYMLTGRYIET 924
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + I +V G+S ND+++GNSA N +G D+ DG +G D + + + +
Sbjct: 925 VFMTGGDAI-AVTGNSLNDIIVGNSAANTLTGLAGADLLDGGAGGDLLIGGSGNDTFSVD 983
Query: 320 RFENAIIVYDANEHKQDFLS---------DVERLRFADQ-CIDSVNVKQRSILEYTASYE 369
+ +V + D + +VE LRF ++ + +++ +
Sbjct: 984 SAGD--VVVENASEGIDIVEAFASVTLGDNVENLRFWGTANLNGIGNALGNVMTGNSGNN 1041
Query: 370 DLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
L G D +++ G D + S Y
Sbjct: 1042 RLDGGAGDDTYYVQNVGDNVVEANGNGTDTVYASVSY 1078
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+S + + GN NN G D G G D F + A + K+ F+ A +
Sbjct: 1333 AFGNSNGNSLTGNDGNNHLNGKGGADNLTGGLGSDIFVFEASNGRDKVLDFQTADVDLID 1392
Query: 331 NEHKQDFLSDVERLRF--ADQCIDSVNVKQRSILE 363
+++ + LR AD ID +++
Sbjct: 1393 ISAHTGGVANFDLLRQNGADAVIDLGGGNMITVIN 1427
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 2/122 (1%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN+ NNV + G +V G G DT++ + + +++ + + +
Sbjct: 1261 TGNAMNNVLTGNGGANVLSGGLGNDTYYVQNSNDNVIEGGGAGSDLIFSSVSYGLNGRYV 1320
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGRDIT 398
+ ID+ + L L G D + F S GRD
Sbjct: 1321 ERLILTGSADIDAFGNSNGNSLTGNDGNNHLNGKGGADNLTGGLGSDIFVFEASNGRDKV 1380
Query: 399 FD 400
D
Sbjct: 1381 LD 1382
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G++ +++++GN+ NN GND G SG D + I+ +
Sbjct: 512 IGNASHNLIVGNAGNNRLDGGEGNDTLQGGSGNDELIAGGILGTGLLEGEAGDDILRSSG 571
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 36/116 (31%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+V+G++ N+ G N G DV G G DT+ + E +Y
Sbjct: 851 ENVIGAAANETYFGTVDGNRLDGGIGVDVLRGGLGDDTYVVDNSNDKVFEAAGEGTDALY 910
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + I I+ ++ L + G D+ +
Sbjct: 911 TSVSYMLTGRYIETVFMTGGDAIAVTGNSLNDIIVGNSAANTLTGLAGADLLDGGA 966
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 25/68 (36%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ E ++ G D ++G+ N+ G+D +G G DT + + +
Sbjct: 631 SGFEGIITGVGLDHIVGDDEANMIETGGGDDTLNGGYGDDTLIGGEGGDIIVAGQGGDGA 690
Query: 326 IVYDANEH 333
D E
Sbjct: 691 DWVDGGEG 698
Score = 45.1 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 21/184 (11%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++ Y + Q ++ + G D + ++ S+S G Y ++
Sbjct: 1045 GGAGDDTYYV--QNVGDNVVEA--NGNGTDTVYASV-------------SYSLSGRYVES 1087
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I G+S + + GN NN +G+D +G +G DT + + + +
Sbjct: 1088 L-ILTGVQAIDATGNSNANNLTGNGGNNRLDGGAGHDRLNGGAGTDTLIGGSGNDSFVVD 1146
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-YTASYEDLIQVIGQD 378
+ + IV + ++ D + D + V + + A L G +
Sbjct: 1147 QAGD--IVTEVSQGGIDTVETATSYTLGDNIENIVLMGLDDVNAVGNAMNNRLTGNAGIN 1204
Query: 379 VFES 382
E
Sbjct: 1205 FLEG 1208
Score = 44.0 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 11/195 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ G+D + G + + S I E + IE++V
Sbjct: 1126 NGGAGTDTLIGGSGNDSFVVDQAGDI-----VTEVSQGGIDTVETATSYTLGDNIENIVL 1180
Query: 274 SSGNDV-VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+DV +GN+ NN ++G + +G G DT+ + +V +
Sbjct: 1181 MGLDDVNAVGNAMNNRLTGNAGINFLEGGLGDDTYVVDNVFDVAAEAANAGIDLVLSSVS 1240
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDV--FESMKHFYEF 389
+ E L S ++L L +G D ++
Sbjct: 1241 FVLG--PETENLTLTGTAAISGTGNAMNNVLTGNGGANVLSGGLGNDTYYVQNSNDNVIE 1298
Query: 390 GLSEGRDITFDSYLY 404
G G D+ F S Y
Sbjct: 1299 GGGAGSDLIFSSVSY 1313
Score = 38.2 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 72/217 (33%), Gaps = 18/217 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
D I+ + G DLLDL + ++L T + +S E V
Sbjct: 724 DGNGIEFVDGGEGVDLLDL-GLTIHDYVLNLATGAVASNPDETF-------VGFELVFTG 775
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--------NAII 326
SG+D + G+ N+ SGND DG +G D + +
Sbjct: 776 SGHDSITGSDGYNIIATGSGNDTVDGGAGFDDLDGGDGLDTLDYSSAGVTLAGMVVDLSL 835
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMK 384
+ +++ + E + A + L+ + L +G D V ++
Sbjct: 836 ATLTKGGQTEYVLNFENVIGAAANETYFGTVDGNRLDGGIGVDVLRGGLGDDTYVVDNSN 895
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
EG D + S Y+ + + VF + A
Sbjct: 896 DKVFEAAGEGTDALYTSVSYMLTGRYIETVFMTGGDA 932
>gi|158424290|ref|YP_001525582.1| zinc-dependent metalloprotease [Azorhizobium caulinodans ORS 571]
gi|158331179|dbj|BAF88664.1| zinc-dependent metalloprotease [Azorhizobium caulinodans ORS 571]
Length = 709
Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats.
Identities = 77/384 (20%), Positives = 130/384 (33%), Gaps = 85/384 (22%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFD-------------------ITELNPNAQEVARWA 58
L D W+ F +P + T+ L + R A
Sbjct: 48 LMDYRWTTSFNGSQPATVMTYAFPTSAADYSSIAGGYPDTQELAQFAPLTQTQMDAVRTA 107
Query: 59 LGEWSKVVDLTFEETSIH----SDIKFI-SSNNGYVC-TPRYDSRYFMEINFDKADVWRY 112
LG + +L F E + + ++F ++ G P Y + D W
Sbjct: 108 LGLVASYTNLVFREVTSGLASEATLRFAQFTDTGSESRFPANSGPYASSDSRVAGDTWLG 167
Query: 113 GIGK------GTILSHNALHEIGHALGLMHPGS--YNGGYPVYGVDNDYENDSFLTSVMS 164
G G+ GT + +HE+GHA GL H +NG DN++ SVMS
Sbjct: 168 GNGQAPAAYFGTDALNTIMHEMGHAFGLKHGHDGSFNGALAPQFNDNEF-------SVMS 220
Query: 165 Y--FMPQDSMMDA---SFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEV------- 211
Y + ++ + + M+ DI A+Q++YGA +G +YK +
Sbjct: 221 YASYFGANTAGSTEAIAGSSPQSYMMFDIAALQELYGANFSKVGTTDVYKWDPVTGQETI 280
Query: 212 ---------QQKDSPFIQTIYDSGGDDLLDLTLIGGVK---------------NYIDLNT 247
T++ +G DL+ + DLN
Sbjct: 281 NGVPAPNTGASSTGKIFSTVWTAGATVTYDLSAFNEDQVDDLRPGQWLTFSKAQIADLNN 340
Query: 248 ESWSSIGGYEKNMTIA--------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
E+ + Y+ I +++ +++ +G+D + GN NNV +GND
Sbjct: 341 EAVAGTAQYQAQGNIYNALLYHGDARSLVSNIITGNGSDKITGNDGNNVISAGAGNDWIS 400
Query: 300 GSSGLDTFFYYAPSYLYKIYRFEN 323
G +G D A + N
Sbjct: 401 GGNGNDIISGGAGADTIIFGSGRN 424
>gi|332970464|gb|EGK09455.1| hypothetical protein HMPREF0476_0906 [Kingella kingae ATCC 23330]
Length = 773
Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats.
Identities = 76/300 (25%), Positives = 112/300 (37%), Gaps = 35/300 (11%)
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY-GVDNDYENDSFLTSVMSYFMPQD 170
YG G +HEIGH+LG H G+YNG G ++ SVMSY +D
Sbjct: 344 YGNGWFDGGYGTLVHEIGHSLGFKHTGNYNGQNGKAEGPYLPDGEENSGHSVMSYKDLRD 403
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT-IYDSGGD 228
S + + D+ A+ YG K + GNN Y+ + KD I+D G
Sbjct: 404 SNQNV-IQTGQGLQIFDLAALHYRYGVNKAENSGNNTYRFKAYNKDKVGNDIYIWDGSGI 462
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIG-------------GYEKNMTIAQHTVIESVVGSS 275
D D + K +DL SW+ IG I T IE+++GS+
Sbjct: 463 DTFDAS-DAKDKVTVDLTPGSWNYIGSKTSHLITDTLGHKVTGQSFIGYGTQIENLIGSA 521
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-------AIIVY 328
ND + GN A+N+ GND G G DT R ++ + V
Sbjct: 522 FNDTLRGNDADNIITGGKGNDTIFGDLGNDTLDGGEGVDQLSGGRGDDIYIVDNTSDTVT 581
Query: 329 DANEHKQDFL---------SDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+A +D + ++VE L + +++ LI G D
Sbjct: 582 EAANEGKDTVISSVNYTLSANVENLTLVGKANLSGTGNDLDNVITGNRGNNTLIGGKGND 641
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------SI 75
+RY + + + + E + ++ R AL E++K ++TFEE
Sbjct: 183 KGIVVRYSFALRNYNGET-NFKEFSVTQKQAVRDALAEYAKYANITFEEVLDSGDQLDKG 241
Query: 76 HSDIKFISSN 85
++D +F +
Sbjct: 242 NADFRFYFDD 251
>gi|209966394|ref|YP_002299309.1| hypothetical protein RC1_3132 [Rhodospirillum centenum SW]
gi|209959860|gb|ACJ00497.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 2485
Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 25/269 (9%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ YI L + ++ G + T+ + + G GND V G + +G+D
Sbjct: 2225 ARQYIRLGPDDD-TLRGGGGDDTVGSGEGRDLLYGDEGNDSVFGGEGYDRLSGGTGDDTI 2283
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---- 354
DG SG+D A + + D S VE +RF DQ +
Sbjct: 2284 DGGSGVDVVRIEAARSAVTLEATGPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVR 2343
Query: 355 -------NVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLY 404
Y A + D+ + F+ ++H+ FG +EGRD T FD Y
Sbjct: 2344 FEAVQPDGGGAFDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAY 2403
Query: 405 LGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDL 462
L + D+R + + + HY+ G +E R+P A F Y+ + D+ +A D
Sbjct: 2404 LARWADVRVAVEAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP--- 2460
Query: 463 VQVGKDHFSNFGCEEGRFVT-FDSYLYLG 490
H+ +G E R T D+ L+L
Sbjct: 2461 ----LRHWLVWGIGEDRIATAADTGLWLA 2485
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 61/331 (18%), Positives = 101/331 (30%), Gaps = 54/331 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + T V+G + ++ G+D G D +
Sbjct: 2201 DYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSGEGRDLLYGDE 2260
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ F + D + S V+ +R +
Sbjct: 2261 GNDS----VFGGEGYDRLSGGTGDDTIDGGSGVDVVRIEAARSAVTLEATGPWGVRLSG- 2315
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G DV ++ I FD + + D G
Sbjct: 2316 ----AATGTDVASGVEL-----------IRFDDQVVYVTLPVRFEAVQPDGG-------- 2352
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSY 486
AF Y+A D+ A AD Q G +H+ FG EGR T FD
Sbjct: 2353 ---------GAFDEAFYLAQWADVRAAVADG--RFQSGLEHYLAFGQAEGRDPTPLFDEE 2401
Query: 487 LYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 544
YL + D+R + + + HY+ G +E R+P A F Y+ + D+ +A D
Sbjct: 2402 AYLARWADVRVAVEAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP- 2460
Query: 545 DLVQAGKDHFSNFGYEEGR-SITFNPDLYLT 574
H+ +G E R + + L+L
Sbjct: 2461 ------LRHWLVWGIGEDRIATAADTGLWLA 2485
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL + D+R R + HY+ G EGR+P F Y+A D+ A
Sbjct: 2355 FDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV 2414
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+G +H+ FG+ E R + F+ YL D+ + +H++ G
Sbjct: 2415 EAGQ--FHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADA----GIDPLRHWLVWG 2468
Query: 599 MKEGR 603
+ E R
Sbjct: 2469 IGEDR 2473
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF Y+A D+ A AD Q+G +H+ FG EGR T F+ + YL + D+
Sbjct: 2354 AFDEAFYLAQWADVRAAVADG--RFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVR 2411
Query: 581 NVFGSDR-SAAAQHYITHGMKEGRALG 606
+ + + +HY+ G +E R
Sbjct: 2412 VAVEAGQFHSGYEHYLAFGWREDRDPS 2438
Score = 40.5 bits (93), Expect = 0.84, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALGI 607
F+ YL + D+ R + +HY+ G EGR
Sbjct: 2354 AFDEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTP 2396
>gi|113954849|ref|YP_730469.1| type I secretion target GGXGXDXXX repeat-containing protein
[Synechococcus sp. CC9311]
gi|113882200|gb|ABI47158.1| type I secretion target GGXGXDXXX repeat protein [Synechococcus sp.
CC9311]
Length = 619
Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats.
Identities = 93/391 (23%), Positives = 149/391 (38%), Gaps = 70/391 (17%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
++ + L Y + P ++ FD LNP QE+ R S +D+TF
Sbjct: 147 QVIKYNLTGGY---SHWDHNPQQQFGNKNDFDGLSLNPERQELLRSVFKYLSNTLDITFI 203
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-----------------FDKADVWRYGI 114
E + +D I N+ + F ++N + +
Sbjct: 204 EDNTFTDFDNILENDINPYSEYDGYISFGDVNEVNYASKRQMLERRFCIINIDNTINPSG 263
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYN--------GGYPVYGVDNDYENDSFLTSVMSYF 166
G G+ +ALHEIGHALGL HPGSYN + ++ ND+ + ++MSYF
Sbjct: 264 GVGSNAWTDALHEIGHALGLSHPGSYNYDPDPESENHNVTFERMAEFYNDTNMLTLMSYF 323
Query: 167 MPQDSMMDAS-------FGY---CATPMVSDIVAVQKIYGAPKGSLG------------N 204
P +++ FG AT M +D +A++ Y K + N
Sbjct: 324 KPNNNLGGLGSLENPNIFGPHMKQATLMPADFIALRGRYEIQKNNAAHGDWNEKKIIGVN 383
Query: 205 NIYK--------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES------- 249
+E Q S + T + +D +D + IDL +
Sbjct: 384 TTITNEDPIWNQVESQISTSRYFYTQVANHNEDTVDFSNTT-EDQKIDLRVTTGDNYDAF 442
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
WS+IGG +KN+ ++ ++ E SG+D++IGN+ANN F + G+D G G D
Sbjct: 443 WSNIGGNKKNLAFSEVSIFEVAKSGSGDDILIGNNANNALFGNDGDDHLIGWGGDDDLSG 502
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ F D+LS
Sbjct: 503 GQGND----ELFGGTGNDLIIAGEGDDYLSG 529
>gi|33866834|ref|NP_898393.1| secreted protease [Synechococcus sp. WH 8102]
gi|33639435|emb|CAE08819.1| possible secreted protease [Synechococcus sp. WH 8102]
Length = 1313
Score = 161 bits (406), Expect = 5e-37, Method: Composition-based stats.
Identities = 81/377 (21%), Positives = 137/377 (36%), Gaps = 67/377 (17%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI--------- 75
Y+I D ++ +F+ P QE ++ +S V L+FE +S
Sbjct: 95 TYYIGQTGDSISAAGDTFNAVTPKPGEQEAIEASMKAFSDVAQLSFEASSSLSGNTTIAW 154
Query: 76 --HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+D + + + I + D + G+ +HE+GHALG
Sbjct: 155 GVSADESIYHGIADFPGDSEATAASGVIIFNEDYDADGGEVESGSYFYLTYIHELGHALG 214
Query: 134 LMHPGSY-NGGYPVY-------------GVDNDYENDSFLTSVMSYFMPQD--SMMDASF 177
L HP + G+ Y +++N+S +VM+Y ++ DAS
Sbjct: 215 LAHPHNGGEAGWNSYESALFPGVSEGADSSAGEFDNNSTPWTVMTYNDSSSYLAVSDASG 274
Query: 178 -------------GYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIY 223
GY DI AVQ +YG + + G+ +Y + + + ++I+
Sbjct: 275 QLDDVSPGYQSIDGYLENLGPIDIAAVQYLYGPNHQSNAGDTVYALNEYELN--GYRSIW 332
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHT------- 266
D+ G+D +D IDL + S I K TIA +
Sbjct: 333 DASGNDTID-AFDSSSSVVIDLRNATLENEIGGGGFLSKINDEYKGYTIAYDSLTLAGFG 391
Query: 267 ------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
VIE+ GS ND + GN +N+ G+D G++G DT + +Y
Sbjct: 392 DGAYQAVIENARGSFLNDSLQGNDYDNLLEGEGGDDTLIGAAGADTLYGAEGDDVYTGGA 451
Query: 321 FENAIIVYDANEHKQDF 337
+ + DF
Sbjct: 452 GGDLFVFDSGANIINDF 468
>gi|238623366|emb|CAS06677.1| alkaline metalloprotease [Pseudomonas sp. Z22b]
Length = 199
Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 76/199 (38%), Gaps = 16/199 (8%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
+ + H +S ++ N + A A+ W+ V +TF E + D
Sbjct: 1 TYTFLTSASSSTMNKHGIS-GFSQFNAQQKAQAVLAMQSWADVAKVTFTEKATGGDGHMT 59
Query: 83 SSNN--------GYVCTPRYDSRYFMEINFDKADVWRYG--IGKGTILSHNALHEIGHAL 132
N + P + Y + + + HEIGH L
Sbjct: 60 FGNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTL 119
Query: 133 GLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSD 187
GL HPG YN G D Y D+ S+MSY+ ++ + S G Y + P++ D
Sbjct: 120 GLAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDD 179
Query: 188 IVAVQKIYGAPKGSLGNNI 206
I A+QK+YGA + ++
Sbjct: 180 IAAIQKLYGANYSTRASDT 198
>gi|240950084|ref|ZP_04754384.1| calcium-binding domain-containing protein [Actinobacillus minor
NM305]
gi|240295433|gb|EER46192.1| calcium-binding domain-containing protein [Actinobacillus minor
NM305]
Length = 1762
Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats.
Identities = 93/449 (20%), Positives = 154/449 (34%), Gaps = 113/449 (25%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSD----IKFISSNNGYVCTPRYDSRYFMEINFDKA 107
+ V R A S ++ F E+ I D + + S NG R I ++
Sbjct: 1276 KAVFRDAYAILSSYTNIQFVESKISGDRDTFVHYASMTNGSAAVARNGGH----ITWNAG 1331
Query: 108 DVWRYGIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
W+ G GT L + ALHEI H LG++H + G P + + ++ S++SY
Sbjct: 1332 SSWK---GWGTDYLYYTALHEIEHTLGMVHTNA--GDIPTFKENGYGNENTAEFSIISYD 1386
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI-EVQQKDSPFIQTIYD 224
+ + S D+ + +G G+++Y S + I+D
Sbjct: 1387 RYVNDNLYLS---LRDLRPYDLAYLHYRFGVNPNARAGDDVYSFANYNTYASDGGRYIWD 1443
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGG----------------------------- 255
G D D + Y++LN SWS +G
Sbjct: 1444 GNGVDTFDASKE-KQGVYVNLNPGSWSYVGEERERNFLVKNINSTQQDAHQYFDLPEKAV 1502
Query: 256 ------------------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ I Q T IE+++GS+ ND +IGN+A+N F +GND
Sbjct: 1503 IDSGNGKEEPLKISDVEYTSGQVYIGQGTQIENLIGSNHNDTLIGNAADNNIFGGAGNDK 1562
Query: 298 FDGSSGL---------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS--------- 339
+G +G DT + +Y + ++ I+ +A D +
Sbjct: 1563 LEGGAGNDYLNGGLGEDTMIGGLGNDIYLVDNTKD--IIVEAKNEGIDTVYSTVDYRLSE 1620
Query: 340 DVERLRFADQCIDSVNVKQ----------RSILEYTASYEDLIQVIGQDVF---ESMKHF 386
+VE L + + L A + LI +G D+F E HF
Sbjct: 1621 NVENLVLIGNTAKEAYGNELDNILTANNIGNTLNGGAGNDRLIGGLGADIFIGGEGADHF 1680
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
F++ L D+ F
Sbjct: 1681 V-----------FNTT--LNGNVDIIKDF 1696
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 22/156 (14%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES------------ 249
NNI+ K Y +GG L + T+IGG+ N I L +
Sbjct: 1550 ADNNIFGGAGNDKLEGGAGNDYLNGG--LGEDTMIGGLGNDIYLVDNTKDIIVEAKNEGI 1607
Query: 250 ---WSSI----GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+S++ +N+ + +T E G+ ++++ N+ N +GND G
Sbjct: 1608 DTVYSTVDYRLSENVENLVLIGNTAKE-AYGNELDNILTANNIGNTLNGGAGNDRLIGGL 1666
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
G D F + + N + + + +D +
Sbjct: 1667 GADIFIGGEGADHFVFNTTLNGNVDIIKDFNTEDKI 1702
>gi|163743491|ref|ZP_02150869.1| PaxA, putative [Phaeobacter gallaeciensis 2.10]
gi|161383194|gb|EDQ07585.1| PaxA, putative [Phaeobacter gallaeciensis 2.10]
Length = 483
Score = 160 bits (404), Expect = 7e-37, Method: Composition-based stats.
Identities = 85/403 (21%), Positives = 136/403 (33%), Gaps = 95/403 (23%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK 80
Y+ DV + ++P +++ A+ W++V +L +D+
Sbjct: 36 YYDYDPDFGDYDVGGEYLPEGATVNMDPAERQMMLQAVAAWNEVANLNLIPARGGTADLT 95
Query: 81 FISSNNGYVC--------------TPRYDSRYFMEINFDKADVWRYGIGK--GTILSHNA 124
F S++ R + +N D + GIG G +
Sbjct: 96 FASAHFADAGLFGFIADFPDPSDLGTRPSPAGDLWLNNSNPDQYVPGIGPILGHTSWNTY 155
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASF-GYCAT 182
LHE+GHALGL HP G +VMSY P ++ +D G+ T
Sbjct: 156 LHELGHALGLHHPNEMPENPTTPG----------QFTVMSYLPHPGEADLDQDLQGWALT 205
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI---------------YKIE------VQQKDSPFIQT 221
PM+ D+ A+Q +YGA + + Y + T
Sbjct: 206 PMLWDMQALQALYGANTETRTDATSYFGDGDGRGDQAYQYGADDMTVQGGDGVARNVSLT 265
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT--------VIESVVG 273
I+D+GG DL+D + + G + IDL +S+IG E N+ +A +IE G
Sbjct: 266 IWDAGGQDLIDASDVAG-NSRIDLRPGQYSTIGALENNVAMAAAVRVDGRTLNLIEDAWG 324
Query: 274 SSGNDVVIGNSANN------------------------------------VFFESSGNDV 297
+GND + GN A N G D
Sbjct: 325 GAGNDHLTGNGAANELAGNAGRDTLAGARNSDVLIGGQGSDRLQGGKGHDALEGGRGRDT 384
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G +G DT + R + + + DF S+
Sbjct: 385 LKGGAGQDTLDGGDGNDRMAGGRGADVFVFSQGADVVIDFQSN 427
>gi|227823260|ref|YP_002827232.1| hypothetical protein NGR_c27300 [Sinorhizobium fredii NGR234]
gi|227342261|gb|ACP26479.1| hypothetical protein NGR_c27300 [Sinorhizobium fredii NGR234]
Length = 607
Score = 160 bits (404), Expect = 9e-37, Method: Composition-based stats.
Identities = 78/401 (19%), Positives = 137/401 (34%), Gaps = 39/401 (9%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
D ++ W++ + + + D ++ R + + +++TF ET+
Sbjct: 17 DGVIGGYAWTSKTLTFGFTKQDIDKNGIDDFAEGDW-KDFYREMFADIAACINVTFRETT 75
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT-------ILSHNALHE 127
I ++ + E A K S LHE
Sbjct: 76 I-ANATLKQTLLDTGGGGFSGGPGPTEDTVTTAVGIDPKSVKSAADIIRLGTFSDVWLHE 134
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSY----FMPQDSMMDAS-- 176
I H+LGL H G + GV ++ + +S + SVM Y + + A
Sbjct: 135 IAHSLGLKHTHDSIAGPTLPGVVDEDDKGTGLLNSSIYSVMGYTYAFWGEDNPFTQARDF 194
Query: 177 ----FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+ DI A+Q +YGA + GN++Y+ + T++D+GG+D +
Sbjct: 195 GTTLNAQPGSLGAIDIAALQHMYGAKAHNTGNDLYRFSDNVDFNRGYTTLWDTGGNDTIA 254
Query: 233 LTLIGGVKNYIDLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
T G + IDL + S+ TIA VIE+ G D++IG
Sbjct: 255 YT--GTSRAKIDLRAATLKAEIGGGGWLSTSETLTGGFTIANGVVIENAKGGPAADILIG 312
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ NV G D G +G D + +V + ++VE
Sbjct: 313 NAVGNVLDGGRGADQLHGLAGNDIYVVDNVGDRVSEAASAGTDLVKSSVSFALG--ANVE 370
Query: 343 RLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L ++ + L A+ + G D +
Sbjct: 371 NLLLTGNLAVNGTGNGLANRLTGNAAANVMSGAAGNDTLDG 411
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES---- 270
++ G+D+ + +G ++ + + + +++ A +E+
Sbjct: 321 GGRGADQLHGLAGNDIYVVDNVGDR-----VSEAASAGTDLVKSSVSFALGANVENLLLT 375
Query: 271 ---VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
V +GN + + GN+A NV ++GND DG G D+ + Y + +
Sbjct: 376 GNLAVNGTGNGLANRLTGNAAANVMSGAAGNDTLDGGQGADSLTGGTGNDTY-VVDNKGD 434
Query: 325 IIVYDANEHKQDFLSDV---------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ +AN S + + I + + A+ L
Sbjct: 435 KVIEEANAGTDIVRSSISLALAANVENLVLTGSASIGGKGNALSNTITGNAAANTLDGGA 494
Query: 376 GQDVFESMK 384
G D+
Sbjct: 495 GGDLLSGNA 503
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 65/201 (32%), Gaps = 25/201 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ G+D + G + E+ + ++++A +E
Sbjct: 406 NDTLDGGQGADSLTGGTGNDTYVVDNKGDK-----VIEEANAGTDIVRSSISLALAANVE 460
Query: 270 SV-------VGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ +G GN + + GN+A N +G D+ G++G D F + +
Sbjct: 461 NLVLTGSASIGGKGNALSNTITGNAAANTLDGGAGGDLLSGNAGKDQFAFSTALGASNVD 520
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D + ++ A + + + TA+ D + D
Sbjct: 521 HIRD-------FSAIDDTIVLSSKIFAA---LTPGTLPAGLFKDLTAAKVDASDRLLYDR 570
Query: 380 FESMKHFYEFGLSEGRDITFD 400
+ + G G+ + F
Sbjct: 571 DTGVLFYDADGSGAGKAVQFA 591
>gi|329848973|ref|ZP_08264001.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844036|gb|EGF93605.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 754
Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats.
Identities = 90/455 (19%), Positives = 148/455 (32%), Gaps = 85/455 (18%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
++ + D +L W+ + Y LN + AR+AL
Sbjct: 14 FSGNQDIDAVLFGTKWTTTNLTYSFPTDAAFYQTPYYDQTYLDTFEVLNTLQKAGARYAL 73
Query: 60 GEWSKVVDLTFEETS----IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
L+F E + H +I+ +++ + + F D+W G
Sbjct: 74 SLVYGYTLLSFTEVTESATTHGNIRIAQNDSSNLES---AEANFPGSETWDGDIWMGKWG 130
Query: 116 K---------GTILSHNALHEIGHALGLMHPGSY------------NGGYPVYGVDN-DY 153
G LHEIGH+LGL H S +G P YG
Sbjct: 131 NEPFYETPQIGNWGQATLLHEIGHSLGLKHGHSDYTTLDLTIGGYIDGPGPRYGTRALPA 190
Query: 154 ENDSFLTSVMSYFMPQD----SMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYK 208
+D + S+M+Y S +F T M +DI A+Q +YGA + N+ Y
Sbjct: 191 AHDGWAWSLMTYRSSPSVGDPSFQGDAFNQPQTFMQNDIAALQYMYGAYFGHNASNSTYT 250
Query: 209 IE--------------------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
++ +TI+D G D D + G IDL
Sbjct: 251 FNNFTGEMFINGVSQGMPAQDSLRNNGGKIFRTIWDGNGIDTYDFSNFTG-NQTIDLAPG 309
Query: 249 SWSSIGGYE---------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANN 287
WS + + N+ A ++IE+ G SGND + GN ANN
Sbjct: 310 GWSMMNAAQLADLYPLYFENPTPPGNVANALLYNNDTRSLIENANGGSGNDFLFGNLANN 369
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ GND G D+ F + ++++ N++ D + + +
Sbjct: 370 ALHGNGGNDQLLSGDGHDSLFGGTGNDTLSAAVGDDSLSGEGGNDY-LDGATGNDTIYAG 428
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+V ++ + L G D
Sbjct: 429 LDQDAAVGGIGNDYIDGEDGDDTLSGDDGNDYLNG 463
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 15/186 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ + +Y +T+ G D LD T G + I+LNT + S G
Sbjct: 571 GTGNDTVYAGSGSN------ETLIGGDGIDFLDATGTTGAYD-INLNTGATSFAGESFTG 623
Query: 260 MTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + +G N+ + N+ N+ + G+D+ +G +G D+ S +
Sbjct: 624 FEHVNSGSGNNAITGNGANNTINSNAGNDTVYAEGGSDIVNGGAGDDSLRGGTGSDILTA 683
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ +A V ++ + L + ++ S E LI D
Sbjct: 684 GTYASAGDVLYGDDGN-------DALTSSGAGTYDGGTGNDTLTAGLGSNETLIGGADTD 736
Query: 379 VFESMK 384
+ +
Sbjct: 737 LLNTAS 742
>gi|86140056|ref|ZP_01058620.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Roseobacter sp. MED193]
gi|85823306|gb|EAQ43517.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Roseobacter sp. MED193]
Length = 438
Score = 159 bits (402), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/397 (19%), Positives = 134/397 (33%), Gaps = 53/397 (13%)
Query: 30 YKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYV 89
+P L T + + AL +++ F + SD +
Sbjct: 40 SEPGDLPTSADYDGWRRMTTAEKAAFEDALEHIESYLNVDFVQAKRTSDPDLNVAAISLP 99
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIG-------KGTILSHNALHEIGHALGLMHPGSYNG 142
Y + D W + + LHE+GHA+GL HP
Sbjct: 100 GAVIGSGGYSIRYQGDSITQWDGFVAYDATLNLSSERYTDLLLHELGHAMGLQHPFEAET 159
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
P YEN+ L S+MSY + + M+ D++A+Q I+GA +
Sbjct: 160 PIP-----EQYENN--LYSLMSYQENPYNG-----EHSDALMLFDVLALQDIWGAAVNNE 207
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ Y + + +I+DSGG D LD T +DL ++SS + ++ +
Sbjct: 208 DDTRY----TGSRTNTVDSIWDSGGIDTLDATGRT-ESVTVDLRQGAFSSFDS-DHDVVV 261
Query: 263 AQHTVIESVVGSSGNDVVIGN------------------SANNVFFESSGNDVFDGSSGL 304
T IE+ G+ GND ++GN + ++ G+D G G
Sbjct: 262 TFGTEIENAFGALGNDRIVGNYLDNLLRGHGGRDLLAGKAGDDQLEGGWGDDTLWGDQGD 321
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDV---ERLRFADQCIDSVNV 356
D F K ++ +I + D LS + F +Q
Sbjct: 322 DVLFGGRGKDRVKGGTGDDRLIGSRGKDTLDGQAGDDLLSGGHGRDIFIFKNQGGADTVS 381
Query: 357 KQRSILE--YTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + + D+ ++ Q ++FG
Sbjct: 382 DFKPGKDMLKIIGHGDMGDLLDQAQDTDAGLLFDFGA 418
>gi|187921346|ref|YP_001890378.1| group 1 glycosyl transferase [Burkholderia phytofirmans PsJN]
gi|187719784|gb|ACD21007.1| glycosyl transferase group 1 [Burkholderia phytofirmans PsJN]
Length = 665
Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/242 (25%), Positives = 93/242 (38%), Gaps = 34/242 (14%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
R FD YL D+ + + +HY+ HG EGRNP+ F + Y+ + D++
Sbjct: 37 RSDHFDRGFYLSQNKDV----AASKTDPVKHYLAHGAFEGRNPNPNFDSAAYLRKYPDVV 92
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL-GSYDDLRNVFGSDRGAAARHYIT 512
A + H+ FG EGR T D+ G L + ++RG +
Sbjct: 93 AAGINP-------LVHYVRFGEAEGRTATPDAARARDGRGSSLEIIESAERGKTTDA-NS 144
Query: 513 HGVKEGRN-----------PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
GV+ RN F A Y+ ++ D+ A D DHF + G+ E
Sbjct: 145 AGVRRARNIRESDRKKVADSGLFSATYYLDTYADIAVAKIDP-------LDHFMDQGWRE 197
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
GR NP L Y D HYI HG G G + + F++ + +
Sbjct: 198 GRRP--NPTFDLGWYADQCPDVLKAGINPLIHYIDHGKAGGFESGPNPIIFEAARKMIAE 255
Query: 622 SR 623
+
Sbjct: 256 AG 257
Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 76/245 (31%), Gaps = 30/245 (12%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITF 399
L F Y + +D+ + +KH+ G EGR + F
Sbjct: 24 RVLNFVRDRAILERSDHFDRGFYLSQNKDVAA----SKTDPVKHYLAHGAFEGRNPNPNF 79
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL----INA 455
DS YL Y D+ G + HY+ G EGR A L
Sbjct: 80 DSAAYLRKYPDVVAA-GIN---PLVHYVRFGEAEGRTATPDAARARDGRGSSLEIIESAE 135
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR-----FVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
D G + E R F + YL +Y D+ + H+
Sbjct: 136 RGKTTDANSAGVRR-ARNIRESDRKKVADSGLFSATYYLDTYADIAVA----KIDPLDHF 190
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
+ G +EGR P+ L + A + P + H+ + G G NP
Sbjct: 191 MDQGWREGRRPNPTFDLGWYADQCPDVLKAGINPLI------HYIDHGKAGGFESGPNPI 244
Query: 571 LYLTS 575
++ +
Sbjct: 245 IFEAA 249
>gi|288959793|ref|YP_003450133.1| hypothetical protein AZL_a00580 [Azospirillum sp. B510]
gi|288962617|ref|YP_003452911.1| hemolysin-type calcium-binding protein [Azospirillum sp. B510]
gi|288912101|dbj|BAI73589.1| hypothetical protein AZL_a00580 [Azospirillum sp. B510]
gi|288914883|dbj|BAI76367.1| hemolysin-type calcium-binding protein [Azospirillum sp. B510]
Length = 427
Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
FD YL DL V G+D AA HYI G +EGR+ AF +Y+A + DL+ AF
Sbjct: 184 FDPLRYLAGNADLARVIGTDSAAARSHYIQSGAREGRSTTAFNPYQYLAGYGDLMAAFGS 243
Query: 459 APDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
Q H+ G EGR T F++ YL S DL FGSDR AA+RHYI G E
Sbjct: 244 DA---QAAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGSDRNAASRHYIDSGRAE 300
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTS 575
R D F A Y ++ D+ AF + A H+ +GY E R P +
Sbjct: 301 QRRLDGFDATAYERANPDIAAAFGAD---LTAATRHYVEYGYREHRRTAVQPVAAQGA 355
Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/169 (37%), Positives = 86/169 (50%), Gaps = 5/169 (2%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRN 413
+ L Y A DL +VIG D + H+ + G EGR T F+ Y YL Y DL
Sbjct: 180 AIDGFDPLRYLAGNADLARVIGTDSAAARSHYIQSGAREGRSTTAFNPYQYLAGYGDLMA 239
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
FGSD AA HYI G++EGR+ AF A Y+AS+ DL+ AF H+ +
Sbjct: 240 AFGSDAQAAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGSD---RNAASRHYIDS 296
Query: 474 GCEEGRFV-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
G E R + FD+ Y + D+ FG+D AA RHY+ +G +E R
Sbjct: 297 GRAEQRRLDGFDATAYERANPDIAAAFGADLTAATRHYVEYGYREHRRT 345
Score = 146 bits (367), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/176 (34%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLR 496
D F L Y+A + DL + H+ G EGR T F+ Y YL Y DL
Sbjct: 182 DGFDPLRYLAGNADLARVIGTDS---AAARSHYIQSGAREGRSTTAFNPYQYLAGYGDLM 238
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
FGSD AA HYI G++EGR+ AF A Y+AS+ DL+ AF A H+ +
Sbjct: 239 AAFGSDAQAAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGSDR---NAASRHYID 295
Query: 557 FGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
G E R + F+ Y + D+ FG+D +AA +HY+ +G +E R + +
Sbjct: 296 SGRAEQRRLDGFDATAYERANPDIAAAFGADLTAATRHYVEYGYREHRRTAVQPVA 351
Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/136 (42%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
FD YL DL V G+D AA HYI G +EGR+ AF +Y+A + DL+ AF
Sbjct: 183 GFDPLRYLAGNADLARVIGTDSAAARSHYIQSGAREGRSTTAFNPYQYLAGYGDLMAAFG 242
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
QA H+ G EGRS T FN D YL S DL FGSDR+AA++HYI G
Sbjct: 243 SD---AQAAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGSDRNAASRHYIDSGRA 299
Query: 601 EGRAL-GISGMQFKSV 615
E R L G ++
Sbjct: 300 EQRRLDGFDATAYERA 315
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 71/191 (37%), Gaps = 18/191 (9%)
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D Y A + ++ + + +
Sbjct: 182 DGFDPLRYLAGNADLARVIGTDSAA--------------ARSHYIQSGAREGRSTTAFNP 227
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRG 420
+Y A Y DL+ G D + H+ + GL EGR T F++ YL S DL FGSDR
Sbjct: 228 YQYLAGYGDLMAAFGSDAQAAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGSDRN 287
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AA+RHYI G E R D F A Y ++ D+ AF + H+ +G E R
Sbjct: 288 AASRHYIDSGRAEQRRLDGFDATAYERANPDIAAAFGAD---LTAATRHYVEYGYREHRR 344
Query: 481 VTFDSYLYLGS 491
G+
Sbjct: 345 TAVQPVAAQGA 355
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSY 576
G D F L Y+A + DL A + H+ G EGRS T FNP YL Y
Sbjct: 178 GPAIDGFDPLRYLAGNADLARVIGTD---SAAARSHYIQSGAREGRSTTAFNPYQYLAGY 234
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
DL FGSD AA HYI G++EGR+
Sbjct: 235 GDLMAAFGSDAQAAGIHYIQSGLREGRSAT 264
>gi|172035829|ref|YP_001802330.1| putative peptidase [Cyanothece sp. ATCC 51142]
gi|171697283|gb|ACB50264.1| putative peptidase [Cyanothece sp. ATCC 51142]
Length = 1143
Score = 157 bits (397), Expect = 6e-36, Method: Composition-based stats.
Identities = 74/343 (21%), Positives = 130/343 (37%), Gaps = 57/343 (16%)
Query: 26 YFIRYKPDVLT--THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-----IHSD 78
+ Y+ D T + + E++ + R V+D+ F E + D
Sbjct: 92 TYSFYEDDDFTNSYYGSESGVKEVSNAVKINYREIFAWLENVIDVDFVEVDEINKDTYGD 151
Query: 79 IKFISSNNGYVCTPRYDSRYF--------MEINFD-KADVWRYGIGKGTILSHNALHEIG 129
I+ SNN Y + + + N+D D + G +HE+G
Sbjct: 152 IRIQDSNNPNYAYAYYPTSPYSKVAGDVHLNSNYDRYGDTNGFQHDPGKHGYMTLVHELG 211
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HALGL H S G + D+ SVM+Y + + AT M DI
Sbjct: 212 HALGLAHTHS--------GTPLSAQLDNTDNSVMTY--------NFTGNSAATFMPLDIA 255
Query: 190 AVQKIYGAPKGSLGNNIY------------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
A+Q +YGA + G+ Y + + + + QT++DS G D LD + +
Sbjct: 256 ALQHLYGAKTHNAGDTTYVFGNYIDQVTVNGVSLVETSNRTKQTLWDSDGIDTLDFSGLN 315
Query: 238 GVKN--YIDLNTE-----SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ ++DL ++SS Y ++ E+V+ SS ND + N+ N
Sbjct: 316 AQSSGFHLDLRQGGLLSKTFSSTTDYSTAVSYGFDV--ENVINSSSNDTIYLNNVANEIS 373
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ D +G D +Y + + K+ N + + ++
Sbjct: 374 GY----LSDRFTGHDKIYYGSNEDILKLDYASNEVTQTQSGQN 412
>gi|190890431|ref|YP_001976973.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Rhizobium etli CIAT 652]
gi|190695710|gb|ACE89795.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium binding
protein [Rhizobium etli CIAT 652]
Length = 2608
Score = 154 bits (388), Expect = 6e-35, Method: Composition-based stats.
Identities = 94/478 (19%), Positives = 148/478 (30%), Gaps = 95/478 (19%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLT-THRLSFDITELNPNAQEVARWAL----GEWS 63
T + D LL W P T + + + AL +
Sbjct: 14 TGDNKVDGLLDLYAWDGTITYAFPTTSTFYDYGPEKNDSFSSISSQQQSLALYFMEQSYG 73
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYV-------CTPRYDSRYFMEINFDKADVWRYG--- 113
+ F ++ F + G P Y + DVW
Sbjct: 74 SAANDGF-SVEGFTNANFEVGSAGTATVRFAQSSLPDTAWAYLPGADGRGGDVWFGTGYA 132
Query: 114 --------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
G G H HE+GHALGL H + + DS ++M+Y
Sbjct: 133 GTEDDLRFPGFGNYAGHTLAHELGHALGLKHAHEAGDFNGIVVPNA---YDSLEYTIMTY 189
Query: 166 F----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK------ 214
D + G T M+ DI A+Q++YGA + G+ +Y+ +
Sbjct: 190 RTYVGDNADGLEYEHDGAPQTFMMLDIAALQEMYGADYTTNSGDTVYRWNPNEGITYVDG 249
Query: 215 -------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--------SIGGYEKN 259
+ TI+D GG D DL+ + IDL +S +GG N
Sbjct: 250 VAAITPDANRIFATIWDGGGIDTYDLSAYTTALS-IDLRAGGYSVFSRGQLADLGGGPNN 308
Query: 260 MTIAQH------------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++IE+V SGND ++GN ANN + + G+D G G DT
Sbjct: 309 GYARGNIFNALLYDGNVASLIENVQAGSGNDKIVGNEANNTLWGNDGDDSLYGGIGNDTL 368
Query: 308 FYYAPSYLYKIYRFENAIIVYD-------ANEHKQDFLS----------DVERLRFAD-Q 349
A S ++ +V D + D + +VE L +
Sbjct: 369 IGGADSDWMVGGAGDDLYVVDDNFDSVIESANQGTDTVQTALSIHTLGNNVETLTYTGSA 428
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQD-----------VFESMKHFYEFGLSEGRD 396
+ + A + L G D + ++ EG D
Sbjct: 429 SFTGTGNALANTITGGAGNDTLNGGAGADTLIGGAGDDAYIVDNAADIVTEAADEGVD 486
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 25/195 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ G+D DL + + T S G +
Sbjct: 2165 NDMLNGGAGADSLIGGAGNDTYIVDHAGDLVIEAADAGIDTVRTTLASYTLGSDVEHLTY 2224
Query: 264 QHTVIESVVGSSGND---VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T +GND + G +A + +GND +G +G D A Y +
Sbjct: 2225 IGTT---AFAGTGNDLDNTITGGAAADTLSGGAGNDTLNGGAGADHMIGGAGDDTYIVDH 2281
Query: 321 FENAIIVYDANEHKQDFL----------SDVERLRFADQCIDSVNVKQ-RSILEYTASYE 369
+ +V +A D + SDVE L F + + + A+ +
Sbjct: 2282 AGD--VVTEAASAGTDTVRTTLASYTLGSDVEHLTFLGTAAFAGTGNSLDNTIMGGAAAD 2339
Query: 370 DLIQVIGQDVFESMK 384
L G D
Sbjct: 2340 TLSGGAGNDTLNGGA 2354
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 80/231 (34%), Gaps = 31/231 (13%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD------- 232
+ + SD+ + + A GN+ ++ T+ G+D L+
Sbjct: 2302 ASYTLGSDVEHLTFLGTAAFAGTGNS---LDNTIMGGAAADTLSGGAGNDTLNGGAGADR 2358
Query: 233 LTLIGGVKNYIDLNTE----SWSSIGGYEKNMTIAQHTVIESV----VGSSGNDVVIGNS 284
L G YI N + G + +A +T+ +V SGN GN+
Sbjct: 2359 LIGGTGDDTYIVDNAGDIVTEAADAGTDTVHTALASYTLGSNVENLTYTGSGNFSGAGNA 2418
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL------ 338
N +GNDV +G +G DT A S Y + + IV +A D +
Sbjct: 2419 LANTITGGAGNDVLNGGAGADTLIGGAGSDTYIVDHAGD--IVTEAAGAGTDTVRTTLAS 2476
Query: 339 ----SDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
S+VE L F + +++ + L+ G D+
Sbjct: 2477 YALGSNVENLTFIGTGAFVGIGNALNNVIVGGSGPNTLMGGAGNDILTGGA 2527
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 25/195 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ G+D DL + + T S G +
Sbjct: 1564 NDMLNGGAGADSLIGGAGNDTYIVDHAGDLVIEAADAGIDTVRTTLASYTLGSDVEHLTY 1623
Query: 264 QHTVIESVVGSSGND---VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T +GND + G +A + +GNDV +G G DT A Y +
Sbjct: 1624 IGTT---AFAGTGNDLDNTITGGAAADTLSGGAGNDVLNGGGGADTLIGGAGDDTYIVDN 1680
Query: 321 FENAIIVYDANEHKQDFLS----------DVERLRFADQ-CIDSVNVKQRSILEYTASYE 369
IV +A + D + +VE L + + + + A+ +
Sbjct: 1681 AGG--IVTEAADEGIDTVRTNLSAYTLGVNVENLTYIGTAAFVGIGNSLDNTITSGAAAD 1738
Query: 370 DLIQVIGQDVFESMK 384
L G D
Sbjct: 1739 TLSGGDGNDTLNGGA 1753
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 24/191 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD--LTLIGGVKNYIDLNTESWSSIGGYE 257
G GN+ Y ++ + T + G DL+ L+ N +L +S G
Sbjct: 795 GGAGNDTYIVDDVGD----VVTEGLNAGTDLIKTALSSYTLGNNVENLQYTGSASFTGT- 849
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++ ++ G +GND + G N+ GND G +G DT +Y
Sbjct: 850 ------GNALLNTITGGAGNDTLDGGIGNDTLNGGGGNDTLIGGAGSDTMSGGMGDDIY- 902
Query: 318 IYRFENAIIVYDANEHKQDFLS---------DVERLRFAD-QCIDSVNVKQRSILEYTAS 367
+ +++ + NE + +VE L + + + A
Sbjct: 903 VVDIATDVVIENVNEGTDTVQTALAGYTLGNNVENLTYTGSASFTGTGNALANTITGGAF 962
Query: 368 YEDLIQVIGQD 378
+ L G D
Sbjct: 963 NDTLNGGAGAD 973
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 74/248 (29%), Gaps = 50/248 (20%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
DIV G Y + ++ +I T +G + LD T+ GG
Sbjct: 1080 AGDIVTEAASAGTDTVRTTLAAYTLAANVENLTYIGTAAFAGAGNSLDNTITGGAAADKL 1139
Query: 245 LNTES-------------WSSIGGYEKNMTIAQHTVIESV-------------------- 271
+ IG + IA VIE+V
Sbjct: 1140 MGAGGNDTLIGGGGADTMLGGIGDDIYVVDIAADLVIENVNEGTDTVQTALVGYTLGNNV 1199
Query: 272 ----VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
N GN+ N +GND +G +G DT A S Y + + IV
Sbjct: 1200 ENLTYTGFANFSGTGNALANTITGGAGNDTLNGGAGADTLIGGAGSDTYIVDDAGD--IV 1257
Query: 328 YDANEHKQDFLS----------DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
+A + D + +VE L FA + + A+ + L G
Sbjct: 1258 TEAADAGSDTVRTNLASYTLTANVENLSFAGTGTFAGTGNNLDNTITGGAATDTLSGGAG 1317
Query: 377 QDVFESMK 384
D+ +
Sbjct: 1318 NDMLDGGA 1325
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 24/190 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ GDD V N D+ TE+ + G + +A +T+
Sbjct: 1746 NDTLNGGAGADRLIGGAGDDTY------VVDNVGDIVTEA-ADAGTDTVHTALASYTLGS 1798
Query: 270 SV----VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+V SGN GN+ N +GND+ +G +G D+ A + Y + +
Sbjct: 1799 NVENLTYTGSGNFSGAGNALANTITGGAGNDMLNGGAGADSLIGGAGNDTYIVDHAGD-- 1856
Query: 326 IVYDANEHKQDFLS----------DVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQV 374
IV +A + D + +VE L FA + + A+ + L
Sbjct: 1857 IVTEAADAGTDTVRTNLASYTLTGNVENLNFAGTGAFAGTGNNLDNTITGGAATDTLSGG 1916
Query: 375 IGQDVFESMK 384
G D+ +
Sbjct: 1917 AGNDMLDGGA 1926
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 63/194 (32%), Gaps = 24/194 (12%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYI-----DLNTESWSSIGGYEK 258
+ TI G D LD L G YI D+ TE ++ K
Sbjct: 1383 FTGTGNSLANTITGGAGADTLDGKAGADILIGGAGNDTYIVDDVGDVVTEGLNAGTDLIK 1442
Query: 259 NM--TIAQHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + +E++ S + GN+ N +GND DG +G DT A +
Sbjct: 1443 TVLSSYTLGNNVENLLYTGSASFTGTGNALVNTITGGAGNDTLDGGAGNDTLDGGAGDDI 1502
Query: 316 YKIYRFENAIIVYDANEHKQD--------FLSDVERLRFAD-QCIDSVNVKQRSILEYTA 366
Y + + I + + L++VE L + +++ A
Sbjct: 1503 YVVDSASDVIKDSAGTDEIRTALAAYSIAALANVENLTYTGSANFTGTGNALANMITGGA 1562
Query: 367 SYEDLIQVIGQDVF 380
+ L G D
Sbjct: 1563 GNDMLNGGAGADSL 1576
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 63/194 (32%), Gaps = 24/194 (12%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYI-----DLNTESWSSIGGYEK 258
+ TI G D LD L G YI D+ TE ++ K
Sbjct: 1984 FTGTGNSLANTITGGAGADTLDGKAGADILIGGAGNDTYIVDDVGDVVTEGLNAGTDLIK 2043
Query: 259 NM--TIAQHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + +E++ S + GN+ N +GND DG +G DT A +
Sbjct: 2044 TVLSSYTLGNNVENLLYTGSASFTGTGNALVNTITGGAGNDTLDGGAGNDTLDGGAGDDI 2103
Query: 316 YKIYRFENAIIVYDANEHKQD--------FLSDVERLRFAD-QCIDSVNVKQRSILEYTA 366
Y + + I + + L++VE L + +++ A
Sbjct: 2104 YVVDSASDVIKDSAGTDEIRTALAAYSIAALANVENLTYTGSANFTGTGNALANMITGGA 2163
Query: 367 SYEDLIQVIGQDVF 380
+ L G D
Sbjct: 2164 GNDMLNGGAGADSL 2177
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 70/228 (30%), Gaps = 29/228 (12%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ G+D + +G V LN + I + T+ + +E+
Sbjct: 530 DTLDGKAGADILIGGAGNDTYVVDDVGDVVTE-GLNEGTD-LIKTTLSSYTLTINANVEN 587
Query: 271 V-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ + GN+ N +GND DG +G DT A + Y + + ++ +
Sbjct: 588 LTYTGFASFTGTGNALANTITGGAGNDTLDGGTGNDTLAGGAGNDTYLVDSTGD--LINE 645
Query: 330 ANEHKQDFLS------------DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
A D + +VE L + +++ A + L G
Sbjct: 646 AVSAGTDEIRTALAAYSIAAVVNVENLTYTGSANFTGTGNALANVISGGAGNDTLNGGTG 705
Query: 377 QD-----------VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
D + +++ EG D + D+ N
Sbjct: 706 ADSLIGGEGDDTYIVDNVGDVVTEAADEGTDTVRTTLASYTLGADVEN 753
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 42/144 (29%), Gaps = 6/144 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T+ G D D+ + T S G
Sbjct: 2429 NDVLNGGAGADTLIGGAGSDTYIVDHAGDIVTEAAGAGTDTVRTTLASYALGSNVENLTF 2488
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T +G++ N+V++G S N +GND+ G + +D F + I F
Sbjct: 2489 IGTGAFVGIGNALNNVIVGGSGPNTLMGGAGNDILTGGAAIDVFIFSPNWGHDTITNFVA 2548
Query: 324 AIIVYDANEHKQDFLSDVERLRFA 347
D +D E L A
Sbjct: 2549 TGSANDVISIDDSIFADWESLFAA 2572
>gi|307152358|ref|YP_003887742.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306982586|gb|ADN14467.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 880
Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats.
Identities = 80/376 (21%), Positives = 134/376 (35%), Gaps = 69/376 (18%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSF-----DITELNPNAQEVARWALGEWSKVVDLTFEET 73
W + + Y + S+ + E++ + R L V+D+ F E
Sbjct: 118 WGFSWGSRQLTYSFYNDSVFGGSYYGTETGVKEVSEGIKTNVRSILNWLENVIDIDFVEV 177
Query: 74 SIHSD----IKFISSNN---GYVCTPRYD------SRYFMEINFDK-ADVWRYGIGKGTI 119
+ + ++F+ SN+ Y P D + N+D+ D + G
Sbjct: 178 AESQNNYGRMRFMLSNDPTYAYAYYPSSDVMDSEAGDVHLNPNYDRLGDTNGFQNLAGKH 237
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
+HEIGHALGL HP + P + D+ +VM+Y + +
Sbjct: 238 GYMALVHEIGHALGLKHPFDDSPNLPP-------QEDNTTNTVMTY--------NFTGNS 282
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ------------QKDSPFIQTIYDSGG 227
T M DI A+Q +YGA + + IYK + Q I+DSGG
Sbjct: 283 AGTYMGFDIKALQYMYGAKAYNTTDTIYKFTTKVDQFSVGGQLSLNTSYSTKQLIWDSGG 342
Query: 228 DDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT----------------IAQHTVIE 269
D LD + DLN + + IA + +IE
Sbjct: 343 KDTLDFFSLAANSTGYRFDLNPGGILTTQSAYNGTSYTVNGTTYKTTTFGTEIAYNVLIE 402
Query: 270 SVVGSSGNDVVIGNSANNVFFE-----SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ SS ND V NSA N F +GNDV+ ++ D + + +
Sbjct: 403 NLINSSSNDEVFANSAANTFAGYSSTRKTGNDVYWNTTSADILDLSSYNLGAVTQTQSSN 462
Query: 325 IIVYDANEHKQDFLSD 340
+V + + + +
Sbjct: 463 DLVLGLGTNGKITVKN 478
>gi|218440126|ref|YP_002378455.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7424]
gi|218172854|gb|ACK71587.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7424]
Length = 768
Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats.
Identities = 80/373 (21%), Positives = 139/373 (37%), Gaps = 69/373 (18%)
Query: 22 YWSNYFIRYKPD-----VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-- 74
W + + Y T + + E++ + R L V+++ F E +
Sbjct: 110 SWGDRKLTYSFYEDSIFNGTYNGSETGVKEVSNAIKNNVRSILNWLENVINIDFVEVTES 169
Query: 75 --IHSDIKFISSN---NGYVCTPRYDSRY------FMEINFDK-ADVWRYGIGKGTILSH 122
+ ++F+ SN Y P DS + N+D+ D + G +
Sbjct: 170 VNNYGRMRFMLSNGPSYAYAYYPSSDSMTSLSGDIHLNPNYDRLGDTNGFQHLAGRHGNL 229
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ +HEIGHALGL HP G + + DN+ N +VM+Y + + T
Sbjct: 230 SLIHEIGHALGLKHPHE--GSFTLAPQDNNTTN-----TVMTY--------NFTGKPAGT 274
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ------------QKDSPFIQTIYDSGGDDL 230
M D+ A+Q +YGA + + IY+ + + Q I+DSGG D
Sbjct: 275 FMGYDVNALQSLYGAKDYNSTDTIYQFTTRVDQFYVNDQLFLNTPNQTKQLIWDSGGKDT 334
Query: 231 LDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT----------------IAQHTVIESVV 272
LD + + + DLN + + + I + VIE ++
Sbjct: 335 LDFSQLSANSSGYRFDLNEGNILTAKNAYNGTSYTVNGVTYYTTTYGTAIGYYVVIEDLI 394
Query: 273 GSSGNDVVIGNSANNVFFE-----SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
SS ND + N+A N F +GND++ +S DT + +V
Sbjct: 395 NSSSNDEIFANNAANRFKGYSPTLKTGNDIYWNTSNNDTLDLSSYQSSDVTQTKNGNDLV 454
Query: 328 YDANEHKQDFLSD 340
+ N + + +
Sbjct: 455 LNLNGNGTITVKN 467
>gi|148553551|ref|YP_001261133.1| peptidase M10, serralysin-like protein [Sphingomonas wittichii RW1]
gi|148498741|gb|ABQ66995.1| Peptidase M10, serralysin-like protein [Sphingomonas wittichii RW1]
Length = 606
Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats.
Identities = 92/420 (21%), Positives = 147/420 (35%), Gaps = 48/420 (11%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+ + A + D Y + + T + + Q A WS V
Sbjct: 31 TWNVDNPATYNPADNYTAKFGAGTAGTGATISYAFDIASNWSAVEQSAFASAAALWSAVA 90
Query: 67 DLTFEETSIH---------SDIKFISSNN----GYVCTPRYDSRYFMEINFDKADVWRYG 113
D+TF + S SD N G T I D +
Sbjct: 91 DVTFVQASPGTAEVILRRGSDGHASGGQNTFFPGSTGTTTIGRARDGAIEIDTSAAGFGP 150
Query: 114 IGK-----GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
IG G +HE GH LGL H G+Y+ +G DS ++MSY P
Sbjct: 151 IGSTFSEYGGYPYTTLVHEWGHVLGLGHGGAYDESL-DFGSPRYTSFDSRAWTLMSYNDP 209
Query: 169 QDSMMDAS---------FGYCATPMVSDIVAVQKIYGAPKGS--LGNNIYKIEVQ----- 212
+ TPM DIVA+Q+IYG + G +Y
Sbjct: 210 DSGFSWGTSRASDGLLYRNTPVTPMPLDIVAIQRIYGVAVDTPLSGGQVYGFNSNIAGPI 269
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
++S I T+++ G + LD++ + IDL+ ++SS+ G + ++ IA T
Sbjct: 270 AKYFDFTQNSRPIVTLWNKGVGNTLDVSGFT-SPSTIDLHDGAFSSVTGLKNDIAIAYGT 328
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYR 320
I+S + GND ++GN +NV +GND G SG D + A
Sbjct: 329 RIDSAITGPGNDTIVGNDNSNVIMAGAGNDSITGGSGNDHLYGAASRAVQGDGSDTITGG 388
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N + +A + + D + +R++ V + + + G D
Sbjct: 389 AGNDYLQGNAGDDRLDGGTGSDRIQGGQGNDSIVGNSGNDSVNGNLGSDTIDGGEGNDSL 448
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 15/158 (9%)
Query: 199 KGSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKN-YIDLNTESWS 251
G GN+ +Y + TI G+D L D L GG + I + S
Sbjct: 361 TGGSGNDHLYGAASRAVQGDGSDTITGGAGNDYLQGNAGDDRLDGGTGSDRIQGGQGNDS 420
Query: 252 --------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S+ G + TI +S+ G G D + G + N+V G+D G +G
Sbjct: 421 IVGNSGNDSVNGNLGSDTIDGGEGNDSLRGGQGGDSIQGGAGNDVLLGDLGDDTLAGGAG 480
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+D + ++ + A + D ++D
Sbjct: 481 IDILTGGGDADVFAFATGDATFATSGALAYMTDMIADF 518
>gi|94498284|ref|ZP_01304844.1| hypothetical protein SKA58_10818 [Sphingomonas sp. SKA58]
gi|94422286|gb|EAT07327.1| hypothetical protein SKA58_10818 [Sphingomonas sp. SKA58]
Length = 1089
Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats.
Identities = 83/444 (18%), Positives = 133/444 (29%), Gaps = 80/444 (18%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS----- 63
T+ AD+ + Y+S+ + ++ AL +
Sbjct: 113 DTDSAADY--QSGYFSDSDGDGVSAQ------NEGFSQFTAMQMVAFHTALNSVAYTQTS 164
Query: 64 --------KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG-- 113
L+ S I + P Y+ + D +
Sbjct: 165 AATAFGVESFTGLSLSYDGAGSSI--ATIRGANSSDPGTAYAYYPSSSIYGGDTFFGNGY 222
Query: 114 ---------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
G H HE+GH+LGL H + P+ DS +VM+
Sbjct: 223 DGTIYSYKTPVAGNYAWHTMFHELGHSLGLAHGQTGGAYGPLPTAW-----DSIEFTVMT 277
Query: 165 YFM----PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQK----- 214
Y P +G T M+ DI A+Q +YGA + GN Y
Sbjct: 278 YRSYVGAPLSGYSYEQWGAPQTYMMLDIAALQAMYGADFTVNSGNTTYSWNPTTGETYIN 337
Query: 215 --------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------GYEKN 259
+ TI+D GG D DL+ +DLN +S G +
Sbjct: 338 GQVAIDPGGNRIFATIWDGGGVDTYDLSNYS-SNLTLDLNPGGYSVFSQAQLAYLGNNGS 396
Query: 260 MTIAQHTV-------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
A+ + IE+ G SGNDV+ GNS +NV + G+D G+ G DT
Sbjct: 397 SVYARGNIFNAMLYQGNTASMIENANGGSGNDVISGNSIDNVLRGNGGDDSLYGNDGNDT 456
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ A + + E +Y + + + + D + + Y
Sbjct: 457 LYGNAGND--YLAGGEGDDTLYGGDGDDILDGAGGTDVIYGGNGNDIIYGGFVTDSVYGE 514
Query: 367 SYEDLIQVIGQDVFESMKHFYEFG 390
+ D G
Sbjct: 515 AGNDWFIQRQIGGVAEFGDNVNGG 538
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++++++ + + + I G D D++ + IDL +++ G ++
Sbjct: 666 AGDDLFRL-FDGWNGSYGEIIVGGAGSDTFDISGTSVATSTIDLADGTFNYTPGGAGAIS 724
Query: 262 IAQHTVIESVVGS------------------SGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + IE+V+G+ SGND ++G N+ + GND+ DG +G
Sbjct: 725 L---SSIENVIGNTGSDAISGSGEVNSLWGRSGNDTLLGQGGNDFLYGEDGNDLLDGGTG 781
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+D + Y + +A+I + + D + A ++++ + L
Sbjct: 782 VDYMAGGTGNDTYYVDSASDAVIEF--SNSGTDIVYASVTYSIAGTNVENITAVGSASL 838
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 66/221 (29%), Gaps = 57/221 (25%)
Query: 193 KIYGAPKGSLG-NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+YG P G N+Y + + T+Y GDD +D
Sbjct: 567 PLYGGPWTVTGVENVYGTQLADTITGNAAGNTLYGQSGDDSID----------------- 609
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF------------------FE 291
G N +I + + G +GND++ G + +++ +
Sbjct: 610 -----GMNGNDSIFGGAGSDMLYGGAGNDILDGGAGDDLLIGGDGDDVFDGGSGRDLMYG 664
Query: 292 SSGNDVFD--------------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+G+D+F G +G DTF S + Y
Sbjct: 665 EAGDDLFRLFDGWNGSYGEIIVGGAGSDTFDISGTSVATSTIDLADGTFNYTPGGAGAIS 724
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
LS +E + + + L + + L+ G D
Sbjct: 725 LSSIENVIGNTGSDAISGSGEVNSLWGRSGNDTLLGQGGND 765
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 82/254 (32%), Gaps = 26/254 (10%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT----PMVSDIVAVQKIYGAPKGS 201
Y + + + SV S + S Y M+ I A GS
Sbjct: 366 NYSSNLTLDLNPGGYSVFSQAQLAYLGNNGSSVYARGNIFNAMLYQGNTASMIENANGGS 425
Query: 202 LGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ I + + + ++Y + G+D L G N E ++ G + +
Sbjct: 426 GNDVISGNSIDNVLRGNGGDDSLYGNDGNDTL----YGNAGNDYLAGGEGDDTLYGGDGD 481
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------------DGSSGL 304
+ + + G +GND++ G + + +GND F +G +G+
Sbjct: 482 DILDGAGGTDVIYGGNGNDIIYGGFVTDSVYGEAGNDWFIQRQIGGVAEFGDNVNGGTGV 541
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT I Y+ ++ VE + + Q D++ Y
Sbjct: 542 DTLDLSQIDLYGAIVDLAGGTWQYNPLYGGPWTVTGVENV-YGTQLADTITGNAAGNTLY 600
Query: 365 TASYEDLIQVIGQD 378
S +D I + +
Sbjct: 601 GQSGDDSIDGMNGN 614
>gi|115373620|ref|ZP_01460915.1| interstitial collagenase (Matrixmetalloproteinase-1) (MMP-1)
(Fibroblast collagenase) [Stigmatella aurantiaca
DW4/3-1]
gi|310824941|ref|YP_003957299.1| peptidase [Stigmatella aurantiaca DW4/3-1]
gi|115369323|gb|EAU68263.1| interstitial collagenase (Matrixmetalloproteinase-1) (MMP-1)
(Fibroblast collagenase) [Stigmatella aurantiaca
DW4/3-1]
gi|309398013|gb|ADO75472.1| Peptidase [Stigmatella aurantiaca DW4/3-1]
Length = 477
Score = 151 bits (381), Expect = 4e-34, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLG 406
+ + + Y A Y I + D+ + F RD TFD+ YL
Sbjct: 264 GHSLGLGHSPDSGAVMY-AYYNGKIDLQPDDLNGIRTLYGTF-----RDSRTFDASFYLS 317
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ DL FG D+GAA+RH+I G EGR F +Y+A + DL AF + +
Sbjct: 318 LHSDLSAAFGGDQGAASRHWIDAGRNEGRMGAPTFDVRDYLARYPDLQAAFGNNYPV--- 374
Query: 466 GKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
H+ G EGR V F + YL Y DLRN FG++ AA H++T G+ EGR
Sbjct: 375 AISHWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNNYRAAMEHFLTAGLHEGRRGSP 434
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
F Y+A++ D+ + + G H+ G EGR
Sbjct: 435 EFDPAYYLAANPDVAAVYGANN--FRGGLIHWLQAGRAEGRR 474
Score = 137 bits (346), Expect = 5e-30, Method: Composition-based stats.
Identities = 60/175 (34%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSY 492
R+ F A Y++ H DL AF H+ + G EGR TFD YL Y
Sbjct: 305 RDSRTFDASFYLSLHSDLSAAFGGDQG---AASRHWIDAGRNEGRMGAPTFDVRDYLARY 361
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGK 551
DL+ FG++ A H++ G+ EGR AF A Y+A + DL NAF + +A
Sbjct: 362 PDLQAAFGNNYPVAISHWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNN---YRAAM 418
Query: 552 DHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGR 603
+HF G EGR S F+P YL + D+ V+G++ H++ G EGR
Sbjct: 419 EHFLTAGLHEGRRGSPEFDPAYYLAANPDVAAVYGANNFRGGLIHWLQAGRAEGR 473
Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAF 540
TFD+ YL + DL FG D+GAA+RH+I G EGR F +Y+A + DL AF
Sbjct: 309 TFDASFYLSLHSDLSAAFGGDQGAASRHWIDAGRNEGRMGAPTFDVRDYLARYPDLQAAF 368
Query: 541 ADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ + + H+ G EGR S+ F+ YL Y DL N FG++ AA +H++T G
Sbjct: 369 GNNYPVAIS---HWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNNYRAAMEHFLTAG 425
Query: 599 MKEGRALGISGMQFKSVMNLSEK 621
+ EGR +F L+
Sbjct: 426 LHEGRRG---SPEFDPAYYLAAN 445
Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLY 404
A + + + +Y A Y DL G + ++ H+ + G++EGR + F + Y
Sbjct: 340 AGRNEGRMGAPTFDVRDYLARYPDLQAAFGNNYPVAISHWMQSGINEGRQGSVAFSAPYY 399
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLV 463
L Y DLRN FG++ AA H++T G+ EGR F Y+A++ D+ +
Sbjct: 400 LAIYPDLRNAFGNNYRAAMEHFLTAGLHEGRRGSPEFDPAYYLAANPDVAAVYGANN--F 457
Query: 464 QVGKDHFSNFGCEEGR 479
+ G H+ G EGR
Sbjct: 458 RGGLIHWLQAGRAEGR 473
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 6/137 (4%)
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G + AP++ + Y ++ + + S
Sbjct: 340 AGRNEGRMGAPTFDVRDYLAR---YPDLQAAFGNNYPVAISHWMQSGINEGRQGSVAFSA 396
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDR 419
Y A Y DL G + +M+HF GL EGR FD YL + D+ V+G++
Sbjct: 397 PYYLAIYPDLRNAFGNNYRAAMEHFLTAGLHEGRRGSPEFDPAYYLAANPDVAAVYGANN 456
Query: 420 G-AAARHYITHGVKEGR 435
H++ G EGR
Sbjct: 457 FRGGLIHWLQAGRAEGR 473
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 43/149 (28%), Gaps = 27/149 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--- 74
W + + T + + AL W + F E
Sbjct: 142 TTVSSWPQTNLTFAFLNSTPDLDAGSS-------RAAVIGALLRWQAAAPVAFTEVGSGN 194
Query: 75 ----------IHSDI-KFISSNNGYVCTPRYDSRYF-----MEINFDKADVWRYGIGKGT 118
H D F ++ + P + Y +++F+ A W G
Sbjct: 195 VDLFVSWQYGDHGDGYPFDANVLAHAFYPACSAPYACSSLSGDVHFNDAYGWTVN-GTQY 253
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVY 147
L ALHE+GH+LGL H Y
Sbjct: 254 DLRSTALHELGHSLGLGHSPDSGAVMYAY 282
>gi|302337198|ref|YP_003802404.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
gi|301634383|gb|ADK79810.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
Length = 1808
Score = 151 bits (380), Expect = 4e-34, Method: Composition-based stats.
Identities = 68/315 (21%), Positives = 108/315 (34%), Gaps = 80/315 (25%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYD 409
D + Y +DL V ++HF G +GR+ FD+ Y +Y
Sbjct: 690 DLLASGLFDENYYIEDNKDLY----FTVANPIRHFLMTGFKKGRNPHPLFDTKYYYETYP 745
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKD 468
D++ HYI +G KEGRNP F YI ++ D+ + P +
Sbjct: 746 DIKRA----GLNPVLHYIRYGAKEGRNPHPLFDTKFYIGNYPDV-KSNGVNPLM------ 794
Query: 469 HFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
H+ N G +E R FD+ YL +Y D+R HYI +G+KE RN +
Sbjct: 795 HYLNLGWKERRNPNPNFDTDYYLTTYSDIRI----KNVNPLSHYILYGIKENRNTHLIGS 850
Query: 527 LEYIASH--------------EDLI----------------------------------N 538
+ I S+ D +
Sbjct: 851 KDSITSNKVISRNKDKELLNKNDFLYGDGLKQIYLKIENYKKENMSIEKIAIQTGLFNEK 910
Query: 539 AFADAPDL--VQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
+ + ++ H+ GY G + + FN YL + D++ H+
Sbjct: 911 YYINNAKGINIKEPFKHYLERGYLLGLNPSSIFNTSQYLDANRDVYWA----NMNPLFHF 966
Query: 595 ITHGMKEGRALGISG 609
I +G E R + G
Sbjct: 967 IKYGYSENRKMVHPG 981
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDD 494
F YI ++DL A+ HF G ++GR FD+ Y +Y D
Sbjct: 694 SGLFDENYYIEDNKDLYFTVANP-------IRHFLMTGFKKGRNPHPLFDTKYYYETYPD 746
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
++ HYI +G KEGRNP F YI ++ D+ + + H
Sbjct: 747 IKRAG----LNPVLHYIRYGAKEGRNPHPLFDTKFYIGNYPDVKSNGVNP-------LMH 795
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
+ N G++E R+ F+ D YLT+Y D+ HYI +G+KE R + G +
Sbjct: 796 YLNLGWKERRNPNPNFDTDYYLTTYSDIRIK----NVNPLSHYILYGIKENRNTHLIGSK 851
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
S+ + SR+K D + ++ +GDG
Sbjct: 852 -DSITSNKVISRNK-------DKELLNKNDFLYGDGL 880
>gi|167855642|ref|ZP_02478400.1| calcium binding domain protein [Haemophilus parasuis 29755]
gi|167853214|gb|EDS24470.1| calcium binding domain protein [Haemophilus parasuis 29755]
Length = 909
Score = 151 bits (380), Expect = 6e-34, Method: Composition-based stats.
Identities = 70/317 (22%), Positives = 115/317 (36%), Gaps = 71/317 (22%)
Query: 52 QEVARWALGEWSKVVDLTFEE-----TSIHSD--IKFISSNNGYVCTPRYDSRYFMEINF 104
+E+ R ++S +++ F E + I F NG I +
Sbjct: 528 KEIFREVYDQYSSYLNVEFVESKVVPVTDRQSLVINFGKMTNGSAAVAMSGG----NITW 583
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+ A+ Y + ALHEIGH LG+ H S Y + DS SVMS
Sbjct: 584 NAAN--DYKSWGEDYSYYTALHEIGHTLGMPHTDSTTEFGKDYLI-----EDSSEFSVMS 636
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI-EVQQKDSPFIQTI 222
Y ++ + + + D+ +Q +G K G+++Y + S + I
Sbjct: 637 YNRYVNNSLYQKLH---SLRMYDLAYLQNRFGVNAKSRAGDDVYTFADFNTYASDGGRYI 693
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESW-------------------------------- 250
+D G D D + Y++LN SW
Sbjct: 694 WDGAGIDTFDASKE-QAGVYVNLNPGSWIYVGETKEKNFLIKSVHSSKQDVKIYFGLPDK 752
Query: 251 ---------------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
S + + I Q T IE+++GS+ +D +IGN+A+N + +G+
Sbjct: 753 ATVDSNGAVNAPLDISDVEYTKGQAYIGQGTQIENLLGSAHSDTLIGNAADNNIYGGAGD 812
Query: 296 DVFDGSSGLDTFFYYAP 312
D G G DTF + A
Sbjct: 813 DTLIGGEGEDTFVFNAS 829
>gi|255590871|ref|XP_002535385.1| conserved hypothetical protein [Ricinus communis]
gi|223523278|gb|EEF26996.1| conserved hypothetical protein [Ricinus communis]
Length = 413
Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 184 MVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
MV+DI A+Q +YGA G+N Y + +PF+ TI+D+GG+D + + V +
Sbjct: 1 MVNDIAAIQYLYGANTSYQTGSNTYTFDPT---TPFLHTIWDAGGNDTISIANFT-VGSV 56
Query: 243 IDLNTESWSSI---------------------GGYEKNMTIAQHTVIESVVGSSGNDVVI 281
IDL +SS+ N+ IA IE+ +G SGND +I
Sbjct: 57 IDLQAGHYSSLRMAPEQSPAGIVWNTAPPATTYDGTNNLGIAYGVTIENAIGGSGNDTLI 116
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVYDANEHKQDFLSD 340
GN+ N + G + DG +G+DT Y Y + N I+ N + D L++
Sbjct: 117 GNAVANHLQGNGGANTLDGGAGIDTAVYTGNFSSYALATNGNGYIVTLQNNPSQTDTLTN 176
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ERL FAD + ++NV + A Y L + F
Sbjct: 177 IERLSFADASM-ALNVGSLAEDPLQAQYTALAEKFYVAYFGRPADAN 222
>gi|71281942|ref|YP_268540.1| putative protease [Colwellia psychrerythraea 34H]
gi|71147682|gb|AAZ28155.1| putative protease [Colwellia psychrerythraea 34H]
Length = 656
Score = 150 bits (379), Expect = 7e-34, Method: Composition-based stats.
Identities = 85/405 (20%), Positives = 142/405 (35%), Gaps = 79/405 (19%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDIT---------ELNPNAQEVARWALGEWSKVVDLTF 70
W+ P +T ++ + ++V L S+V +TF
Sbjct: 55 GNRWNFNQELGTPVTITYGFTGDEMGYVFPDDIQRDFYQYEKDVIVDVLTHISEVSGITF 114
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
EE + F+ Y + D+AD RY + S + H + H
Sbjct: 115 EEKFTRENSDFVFRIGAYTGSGS------NVPPIDEADYIRYSYRRTVTFSQS--HAL-H 165
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYE------------------------NDSFLTSVMSYF 166
L H +D+ N++ SVM
Sbjct: 166 YLNPNHDFYLRVKNDDIDYKHDFARSKAVILRDISRIIGLTRWNDGQENNNDFYSVM--- 222
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK--GSLGNNIYKIEVQQKDSPFIQTIYD 224
P+ + + + T DIV +Q +YG P + N Y + F Q I D
Sbjct: 223 APKATGLSSETFAPTTLKKYDIVMLQHLYGKPFKVETDPNMTYNYDDSY---DFHQMIVD 279
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY-----------------EKNMTIAQHTV 267
G+D + + + N IDL+ ++SSI N++I T
Sbjct: 280 KDGEDTISV-VNSQRSNIIDLHPGAFSSIASRPTGFFDPDTESEHLNRSYNNLSIDYGTR 338
Query: 268 IESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDTFFYYAPSYLYKI 318
IE+ G S NDV+IGN N ++ GND+ DG +G+DT Y Y+I
Sbjct: 339 IENAEGGSNNDVLIGNYTANKLNGNAGDDKIQGYGGNDLIDGGAGIDTAVYANEKVQYEI 398
Query: 319 YRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
N++ V + D L+++E ++F+D+ I ++
Sbjct: 399 EYVGNSVTVLTLPSGNEGLDTLTNIEFIQFSDETIAINQAPVITL 443
>gi|124023792|ref|YP_001018099.1| hypothetical protein P9303_20991 [Prochlorococcus marinus str. MIT
9303]
gi|123964078|gb|ABM78834.1| Hypothetical protein P9303_20991 [Prochlorococcus marinus str. MIT
9303]
Length = 486
Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats.
Identities = 103/409 (25%), Positives = 161/409 (39%), Gaps = 71/409 (17%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSF--DITELNPNAQEVARWALGEWSKVVDLTFEETSI-H 76
D + N IR+ +L+ D L + +AR A + + + + F ET+
Sbjct: 50 DHFHKNGRIRFNVSGWNNEQLAIPPDSDGLIDEYRNLAREAFKLFEENLGIDFVETNEED 109
Query: 77 SDIKFISS--NNGYVCTPRYDSRYFME---------INFDKADVWRYGIGKGTILSHNAL 125
+DI FI + + GY + R IN D + G L +
Sbjct: 110 ADIFFIDNHRDGGYWSYTPLEERSLYSEKAYPEHSFINITVDDSLSAKLHGG--LFATFI 167
Query: 126 HEIGHALGLMHPGSYN-----GGYPVYGVDNDYENDSFLTSVMSYFMPQD---------- 170
HEIGH+LGL H G+YN Y Y N S +S+MSYF
Sbjct: 168 HEIGHSLGLGHDGNYNFDDSNPKASNYENAGPYLNSSQQSSMMSYFRVPSKDALRSWGVE 227
Query: 171 ----SMMDASFGYCATPMVSDIVAV-----QKIYGAPKGSLGNNIYKI---------EVQ 212
++ +A F + TPM D +A+ Q+ YG G+ +Y V
Sbjct: 228 MINPNIANAHFEHTNTPMPIDWLALDNIYKQQGYGISNSFNGDTLYGADTSIPAEVSNVW 287
Query: 213 QKDSPFI----QTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-------SSIGGYEKNMT 261
+ + FI TI D G D++D++ G IDL S + G + N+
Sbjct: 288 NQFADFIHHNAFTIVDGSGHDIIDVS-FSGFDQTIDLRATDPNSDFLYPSDVNGLKGNLY 346
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA +T IE + SGND++IGN NN+ SG+D G G +T + +
Sbjct: 347 IAANTEIEEAITGSGNDLLIGNKFNNILDGGSGSDELWGFKGANTLKAGDFDDVTDKFYI 406
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +V + DFL V+ +D+ + + + Y ED
Sbjct: 407 KASNMV-----EQCDFLFQVDS---SDRIYIDTSDDGQ--ITYQDHIED 445
>gi|284052046|ref|ZP_06382256.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 331
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 97/255 (38%), Gaps = 20/255 (7%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAA------ARHYITHGVKEGRNPDAFKAL-EYIASHED 451
FD +YL DL F + AA H+ G EGR AF ++ Y+ + D
Sbjct: 69 FDEEVYLAQNPDLAQ-FKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNTD 127
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ + HF +FG E R + F + Y + DL + + H
Sbjct: 128 ISLVINR-----EEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSKFAH 182
Query: 510 YITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQ--AGKDHFSNFGYEEGRSIT 566
++ G E R F A Y+ + D+ ++ +L + HF G E R +
Sbjct: 183 FLGVGQFENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFS 242
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+ YL DL S A H++ G+ E R +S + + LS S
Sbjct: 243 NIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFGISERREFSLSFTVSQVLRTLSLSSLT 302
Query: 625 KADLSLSFDHKKVDL 639
+ ++S F + +L
Sbjct: 303 EINISELFAQIESNL 317
Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 24/219 (10%)
Query: 364 YTASYEDLIQ-----VIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y A DL Q F +HF EFG EGR+ + F YL D+ V
Sbjct: 74 YLAQNPDLAQFKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNTDISLVI- 132
Query: 417 SDRGAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+R A H++ G+ E R F A Y ++ DL + + HF G
Sbjct: 133 -NREEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQ---ETLVSKFAHFLGVGQ 188
Query: 476 EEGRFVT--FDSYLYLGSYDDLRNVFGSDRG-----AAARHYITHGVKEGRN-PDAFKAL 527
E R + FD+ YL D+ + +A H+IT G E R + F
Sbjct: 189 FENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVS 248
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
EY+ + DL+ F ++ ++ DH+ FG E R +
Sbjct: 249 EYLQLNPDLVP-FVESGEI--NAIDHWVRFGISERREFS 284
Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 9/186 (4%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
E R + S+ Y D+ VI + E+ HF +FGL+E R+ + F
Sbjct: 99 EHFREFGKFEGREFSAFFSVTRYLEKNTDISLVI--NREEAFSHFLDFGLNEAREFSDFF 156
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFAD 458
+ Y + DL + + H++ G E R F A Y+ + D+ +
Sbjct: 157 SASFYAEANPDLAAITQETLVSKFAHFLGVGQFENRRCSRVFDANNYLQLNPDVSQLLQE 216
Query: 459 AP--DLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ L HF G E R + FD YL DL S A H++ G
Sbjct: 217 SANLGLQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFG 276
Query: 515 VKEGRN 520
+ E R
Sbjct: 277 ISERRE 282
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 13/150 (8%)
Query: 345 RFADQCIDSVN--VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FD 400
F D ++ S Y + DL + + + HF G E R + FD
Sbjct: 140 HFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSKFAHFLGVGQFENRRCSRVFD 199
Query: 401 SYLYLGSYDDLRNVF--GSDRG---AAARHYITHGVKEGRN-PDAFKALEYIASHEDLIN 454
+ YL D+ + ++ G +A H+IT G E R + F EY+ + DL+
Sbjct: 200 ANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLVP 259
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
DH+ FG E R +
Sbjct: 260 FVESGE---INAIDHWVRFGISERREFSLS 286
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 522 DAFKALEYIASHEDLINAF--ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
F Y+A + DL +A ++HF FG EGR + F+ YL
Sbjct: 67 QLFDEEVYLAQNPDLAQFKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNT 126
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALG 606
D+ V +R A H++ G+ E R
Sbjct: 127 DISLVI--NREEAFSHFLDFGLNEAREFS 153
>gi|307309503|ref|ZP_07589159.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|306900088|gb|EFN30708.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 388
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 107/315 (33%), Gaps = 53/315 (16%)
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-----MPQDS 171
G H LHE+GHALGL H + + DS SV+SY S
Sbjct: 20 GNYAWHTHLHELGHALGLKHGHESDVYGATPA-----QYDSIEYSVLSYRAYVGADTGGS 74
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-------------KDSP 217
FG T M+ DI A+Q++YGA + GN +YK +
Sbjct: 75 YSYEQFGAPQTFMMGDIAALQEMYGADFTTNSGNTVYKWTPGSGATFVNGAVGISPGANR 134
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------GYEKNMTIAQHTV--- 267
TI+D GG D DLT +DL S+ N A V
Sbjct: 135 IFATIWDGGGKDTYDLTAYT-TALKVDLRPGKASTFSIDQLAWLDGGPNGGFAAGNVFNA 193
Query: 268 ----------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--- 314
IE+V G S D + GN A NV + +GND +G +G D + + S
Sbjct: 194 LLYRGDTRSLIENVKGGSAGDAITGNQATNVLWGYAGNDTLNGDTGNDVLYGGSGSDRLY 253
Query: 315 -----LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
N +I A + + S + F + R +
Sbjct: 254 GGKGNDQIFGETGNDLIYAGAGADRLNGGSGTDSFVFKALSDSTAAASGRDTIFDFTPKS 313
Query: 370 DLIQVIGQDVFESMK 384
D I + D S+
Sbjct: 314 DRIDLSAIDANTSIA 328
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 53/174 (30%), Gaps = 4/174 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G N+ I + G D N + + ++ G
Sbjct: 180 GPNGGFAAGNV--FNALLYRGDTRSLIENVKGGSAGDAITGNQATNVLWGYAGND-TLNG 236
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + + + + G GND + G + N++ + +G D +G SG D+F + A S
Sbjct: 237 DTGNDVLYGGSGSDRLYGGKGNDQIFGETGNDLIYAGAGADRLNGGSGTDSFVFKALSDS 296
Query: 316 YKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I + + D D DQ + Y
Sbjct: 297 TAAASGRDTIFDFTPKSDRIDLSAIDANTSIAGDQAFLFAGTAGFGGKKGELRY 350
>gi|163794636|ref|ZP_02188606.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
gi|159179909|gb|EDP64434.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
Length = 485
Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats.
Identities = 84/370 (22%), Positives = 138/370 (37%), Gaps = 60/370 (16%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD---IKFISSN-NGYVCT 91
+ + + + E N + AR AL EWS ++TF E S D ++F S + Y
Sbjct: 80 SYNSTASNFQEFNDTMKSAARLALAEWSSAANITFVEVSDAGDGGTLRFGSEAMSDYAGY 139
Query: 92 PRYDSRYFMEINFDKADVWRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
Y S + + ++ + Y G +HEIGHA+GL HPG+Y +
Sbjct: 140 AYYPSTSAIGGDIWISNSFSYNTAPVVGNYGYLTYMHEIGHAIGLKHPGNYGSSTGPFLS 199
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG-APKGSLGNNIYK 208
+ D+ +VMSY S Y + DI+A + +YG + G++GN +
Sbjct: 200 SSA---DNTDNTVMSY-------TTGSAVYPTSLGSYDILAARYLYGYSGTGTIGNVTFG 249
Query: 209 IEVQQK--DSPFIQTIYDSGGDDLL------DLTLIGGVKNYI------DLNTESWSS-- 252
+ + IQ ++ G D + D G + + DL + S
Sbjct: 250 SDAAETFTGDSGIQYVHGRDGADYIAVLGGNDGVAAGSGSDTVLGGDGSDLIYGNIGSDL 309
Query: 253 IGGYEKNMTIAQH-----------------TVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ G N TI + IE+V G SGNDV+ GN N++ +GN
Sbjct: 310 LSGGSGNDTIFGGQNDGPESSGSDGVLKYRSGIETVDGGSGNDVLYGNYGNDLILGGTGN 369
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D+ +G D S IY + ++ + +R F +
Sbjct: 370 DLIY--AGQDEDTASGGSGNDTIYGNKGHDLLIGGD--------GFDRFMFGSDSGNDTI 419
Query: 356 VKQRSILEYT 365
+Y
Sbjct: 420 SDFTYFTDYL 429
>gi|75812711|ref|YP_320328.1| hemolysin-type calcium-binding region [Anabaena variabilis ATCC
29413]
gi|75705467|gb|ABA25139.1| Hemolysin-type calcium-binding region [Anabaena variabilis ATCC
29413]
Length = 2296
Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats.
Identities = 92/476 (19%), Positives = 158/476 (33%), Gaps = 77/476 (16%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTI-----AQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + ++ +S+ + N T+ + +I + G +GND + G +++
Sbjct: 1679 NNSSLAATVTIDPREVASLTAGDNNDTVTVFTGYANDIILN--GGAGNDTLTGGDGDDII 1736
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYD----ANEHKQDFLSDVERL 344
GNDV +G +G D L + +++D A + +E L
Sbjct: 1737 TGGEGNDVLNGGAGDDVLNVDTTDNLAALRGGTGFDTVIFDTGTTAFSFALGDANSIEFL 1796
Query: 345 RFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI------ 397
D + + + L+ IG D E F S G D+
Sbjct: 1797 IANDGANTITYYGATSVVFSGLGGNDVLVSGIGNDRLEGGDGFDTLTSSLGNDVLIGGRG 1856
Query: 398 ------------------------TFD-SYLYLG---SYDDLR------NVFGSDRGAAA 423
F+ SY Y+ + + F D G
Sbjct: 1857 DDILDGGDGYDTAVYQGSIFTNVVNFNGSYTYVKDTVNNRNDTDRVSNVEAFSFDDGVRT 1916
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FV 481
+E R+ + F Y + D++ A + G H+ +G EGR
Sbjct: 1917 -------WQELRDFEDF----YRLRNPDVVAAI--NANKFSSGFYHYVIWGKNEGRPISF 1963
Query: 482 TFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
F+ Y Y D+ + HYI+ G +GR + F Y + D+ A
Sbjct: 1964 DFNEAYYRLLYKDVDAAIKAGSVRSGLAHYISTGFAQGRQTNFDFNETYYRLLNPDVDAA 2023
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL-WNVFGSDRSAAAQHYIT 596
+ + HF N GY EGR++ FN + Y ++ D+ + + HYI
Sbjct: 2024 I--KAGTMPSALYHFINHGYSEGRTLASQFNENYYRSANADVNAGIIAGTYKSGLDHYIK 2081
Query: 597 HGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDS 652
G EGR F S + ++D S + D + D GN D+
Sbjct: 2082 TGFAEGRMARFDA--FSSTLTHGTNNKDYIVGSANNDVLRGFAGDDIINAGNGNDT 2135
Score = 144 bits (362), Expect = 7e-32, Method: Composition-based stats.
Identities = 80/369 (21%), Positives = 134/369 (36%), Gaps = 30/369 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-LNTESWSSIGGYEKNMTI 262
+ + + + F I+D+G + G N I+ L ++ Y ++
Sbjct: 1757 DTTDNLAALRGGTGFDTVIFDTG---TTAFSFALGDANSIEFLIANDGANTITYYGATSV 1813
Query: 263 AQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYA 311
+ + +V GND + G + S GNDV DG G DT Y
Sbjct: 1814 VFSGLGGNDVLVSGIGNDRLEGGDGFDTLTSSLGNDVLIGGRGDDILDGGDGYDTAVYQG 1873
Query: 312 PSYLYKIYRFENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + V D N + D +S+VE F D ++ Y
Sbjct: 1874 SIFTNVVNFNGSYTYVKDTVNNRNDTDRVSNVEAFSFDDGVRTWQELRDFEDF-YRLRNP 1932
Query: 370 DLIQVIGQDVF-ESMKHFYEFGLSEGRDITFD--SYLYLGSYDDLRNVFGSDRG-AAARH 425
D++ I + F H+ +G +EGR I+FD Y Y D+ + + H
Sbjct: 1933 DVVAAINANKFSSGFYHYVIWGKNEGRPISFDFNEAYYRLLYKDVDAAIKAGSVRSGLAH 1992
Query: 426 YITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-- 482
YI+ G +GR + F Y + D+ A + HF N G EGR +
Sbjct: 1993 YISTGFAQGRQTNFDFNETYYRLLNPDVDAAI--KAGTMPSALYHFINHGYSEGRTLASQ 2050
Query: 483 FDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNP--DAFKALEYIASHEDLINA 539
F+ Y + D+ + + HYI G EGR DAF + ++
Sbjct: 2051 FNENYYRSANADVNAGIIAGTYKSGLDHYIKTGFAEGRMARFDAFSSTLTHGTNNKDYIV 2110
Query: 540 FADAPDLVQ 548
+ D+++
Sbjct: 2111 GSANNDVLR 2119
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N TI + + G +GND + G+ N+ +GND DG +G DTF + A
Sbjct: 2127 INAGNGNDTIQGGIGNDILRGEAGNDALYGDDGNDYLIGGAGNDTMDGGAGTDTFSWDAT 2186
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ + + + DF S+VE L
Sbjct: 2187 ALKSNDLMAGGLDTLLNPKGDRIDFTSNVEALL 2219
Score = 38.6 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--NAIIVYDANEHKQDF 337
+ G++A+++ + G D+ G G D + + I N +++ D
Sbjct: 1334 ISGSNADDILYGGPGPDLMQGGGGDDVYILKPGTQADVIDDSPLYNGVVI----PGGTDT 1389
Query: 338 LS 339
L
Sbjct: 1390 LQ 1391
Score = 37.4 bits (85), Expect = 8.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 11/85 (12%)
Query: 257 EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ I + E+ VG + + G+SA V + G D+ G +G D + +
Sbjct: 1163 NGNVYIRR----ENKVGPPSLGNWITGSSAAEVLYGGIGPDLIQGGTGDDLYILQPSTQT 1218
Query: 316 YKIYR--FENAIIVYDANEHKQDFL 338
I N ++V D L
Sbjct: 1219 VVIDDSPANNGVVV----PGGTDTL 1239
>gi|330950563|gb|EGH50823.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae Cit 7]
Length = 304
Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats.
Identities = 76/298 (25%), Positives = 115/298 (38%), Gaps = 50/298 (16%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L A+ AL WS V
Sbjct: 29 PFWLGDSSGTHLTYSFHRAD---SVYATDYSRSQEPGDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFI------SSNNGYVCTPRYDSRY---FMEINFDKADVWRY 112
D+ F E DI+F + G P R ++ N + AD
Sbjct: 86 ADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H Y +D +E+ ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFE-GSQYNDVLLDAKFEDA--RYTIMSYTN----- 192
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
+ SF TPM+ D+ A+Q IYGA G+++YK Q +TI+D+GG D +
Sbjct: 193 -NYSF-KPTTPMLLDVAAMQFIYGANTHYHTGDDVYKWAPGQS---VFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSS 275
D + I+LN +S+IG + IA IE+ +GS+
Sbjct: 248 DASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTLMNSGLAIAYGAHIENAIGSA 304
>gi|33866440|ref|NP_897999.1| Zn-dependent metalloprotease [Synechococcus sp. WH 8102]
gi|33633218|emb|CAE08423.1| Possible Zn-dependent metalloprotease [Synechococcus sp. WH 8102]
Length = 391
Score = 147 bits (370), Expect = 8e-33, Method: Composition-based stats.
Identities = 79/343 (23%), Positives = 131/343 (38%), Gaps = 58/343 (16%)
Query: 58 ALGEWSKVVDLTFEETSIHS-----------DIKFISSNNGYVCTPRYDSR----YFMEI 102
A+ E S V L F++ + D + + G+ TP DS
Sbjct: 4 AMEEISAVCSLQFDDRGDDNDDGVEIWYYNLDQRQSEGSYGFAYTPGTDSDEGLVAINWS 63
Query: 103 NFDKAD-VWRYGIGKGTILSHNALHEIGHALGLMHPGSYN-GGYPVYG----------VD 150
+ AD ++ I G+ LHE+ HA+GL HP G P +
Sbjct: 64 TYQNADGSFKNSIASGSFYGITFLHELSHAVGLKHPHDRGLFGQPRFPGLTHRSNEFRDK 123
Query: 151 NDYENDSFLTSVMSYFM--PQDSMMDAS---FGYCATPMVSDIVAVQKIYGAP-KGSLGN 204
D++ ++ + ++Y ++ M+ S +G+ T DI A+Q +YG + G+
Sbjct: 124 GDFDQNAHPFTQLTYVDKGARNGMVPRSIEAYGFLQTLGALDIAALQWMYGINPDAASGD 183
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS---IGGYE---- 257
+ Y + ++ ++ + I+D+GG D + IDL + GGY
Sbjct: 184 DTYTLPLENREGTGWRAIWDTGGVDRITAGGAT-APVTIDLRNATLGDDVNAGGYVSRAE 242
Query: 258 ---KNMTIAQH------------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
TIA VIE +G G+DV+IGN A+N+ G DV
Sbjct: 243 DVFGGFTIAHDWYGRNVGQSAGLCVIEIAIGGKGDDVLIGNRADNLLKGKKGADVLVAGG 302
Query: 303 GL-DTFFYYAPSYLYKIYRFENAII-VYDANEHKQDFLSDVER 343
G + + I A++ V D N K + DV+
Sbjct: 303 GDGNRVTGGKGRDQFWISAQHGALVKVTDFNPRKDRLVFDVDV 345
>gi|209524097|ref|ZP_03272648.1| Periplasmic protein TonB links inner and outer membranes-like
protein [Arthrospira maxima CS-328]
gi|209495472|gb|EDZ95776.1| Periplasmic protein TonB links inner and outer membranes-like
protein [Arthrospira maxima CS-328]
Length = 2523
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 95/254 (37%), Gaps = 18/254 (7%)
Query: 399 FDSYLYLGSYDDLRNV-----FGSDRGAAARHYITHGVKEGRNPDAFKAL-EYIASHEDL 452
FD +YL DL + A H+ G EGR AF ++ Y+ + DL
Sbjct: 68 FDEEVYLAQNPDLAQFKLELESAGFQFNAREHFREFGKFEGREFSAFFSVTRYLEKNTDL 127
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ HF +FG E R + F + Y + DL + + H+
Sbjct: 128 SLVINR-----EEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSKFAHF 182
Query: 511 ITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPD--LVQAGKDHFSNFGYEEGRSIT- 566
+ G E R F A Y+ + D+ ++ + + + HF G E R +
Sbjct: 183 LGFGQFENRRFSRVFDANTYLQLNPDVSQLLQESANLGIQISAFSHFITRGRSENRQFSN 242
Query: 567 -FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDK 625
F+ YL DL S A H++ G+ E R +S + + LS S +
Sbjct: 243 IFDVSEYLQLNPDLVPFVESGEINAIDHWVRFGISERREFSLSFSISQVLRTLSLSSLTE 302
Query: 626 ADLSLSFDHKKVDL 639
++S F + +L
Sbjct: 303 INISELFAQIESNL 316
Score = 140 bits (353), Expect = 7e-31, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 97/257 (37%), Gaps = 24/257 (9%)
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-----VIGQDVF 380
V D + V L D + + Y A DL Q F
Sbjct: 35 SVDDPAVEVTTTATPVNPLSEVVNLRDFIIEQLFDEEVYLAQNPDLAQFKLELESAGFQF 94
Query: 381 ESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ +HF EFG EGR+ + F YL DL V +R A H++ G+ E R
Sbjct: 95 NAREHFREFGKFEGREFSAFFSVTRYLEKNTDLSLVI--NREEAFSHFLDFGLNEAREFS 152
Query: 439 AFK-ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F A Y ++ DL + + HF FG E R + FD+ YL D+
Sbjct: 153 DFFSASFYAEANPDLAAITQ---ETLVSKFAHFLGFGQFENRRFSRVFDANTYLQLNPDV 209
Query: 496 RNVFGSDRG-----AAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQA 549
+ +A H+IT G E R + F EY+ + DL+ F ++ ++
Sbjct: 210 SQLLQESANLGIQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLVP-FVESGEI--N 266
Query: 550 GKDHFSNFGYEEGRSIT 566
DH+ FG E R +
Sbjct: 267 AIDHWVRFGISERREFS 283
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
S Y + DL + + + HF FG E R + FD+ YL D+
Sbjct: 152 SDFFSASFYAEANPDLAAITQETLVSKFAHFLGFGQFENRRFSRVFDANTYLQLNPDVSQ 211
Query: 414 VF--GSDRG---AAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ ++ G +A H+IT G E R + F EY+ + DL+
Sbjct: 212 LLQESANLGIQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLVPFVESGEI---NAI 268
Query: 468 DHFSNFGCEEGRFVTFD 484
DH+ FG E R +
Sbjct: 269 DHWVRFGISERREFSLS 285
>gi|291566536|dbj|BAI88808.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2483
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 97/255 (38%), Gaps = 20/255 (7%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAA------ARHYITHGVKEGRNPDAFKAL-EYIASHED 451
FD +YL DL F + AA H+ G EGR AF ++ Y+ + D
Sbjct: 69 FDEEVYLAQNPDLAQ-FKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNTD 127
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ + HF +FG E R + F + Y + DL + + H
Sbjct: 128 ISLVINR-----EEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSKFAH 182
Query: 510 YITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQ--AGKDHFSNFGYEEGRSIT 566
++ G E R F A Y+ + D+ ++ +L + HF G E R +
Sbjct: 183 FLGVGQFENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFS 242
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+ YL DL S A H++ G+ E R +S + + LS S
Sbjct: 243 NIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFGISERREFSLSFTVSQVLRTLSLSSLT 302
Query: 625 KADLSLSFDHKKVDL 639
+ ++S F + +L
Sbjct: 303 EINISELFAQIESNL 317
Score = 136 bits (343), Expect = 9e-30, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 24/219 (10%)
Query: 364 YTASYEDLIQ-----VIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y A DL Q F +HF EFG EGR+ + F YL D+ V
Sbjct: 74 YLAQNPDLAQFKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNTDISLVI- 132
Query: 417 SDRGAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+R A H++ G+ E R F A Y ++ DL + + HF G
Sbjct: 133 -NREEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQ---ETLVSKFAHFLGVGQ 188
Query: 476 EEGRFVT--FDSYLYLGSYDDLRNVFGSDRG-----AAARHYITHGVKEGRN-PDAFKAL 527
E R + FD+ YL D+ + +A H+IT G E R + F
Sbjct: 189 FENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVS 248
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
EY+ + DL+ F ++ ++ DH+ FG E R +
Sbjct: 249 EYLQLNPDLVP-FVESGEI--NAIDHWVRFGISERREFS 284
Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 9/186 (4%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
E R + S+ Y D+ VI + E+ HF +FGL+E R+ + F
Sbjct: 99 EHFREFGKFEGREFSAFFSVTRYLEKNTDISLVI--NREEAFSHFLDFGLNEAREFSDFF 156
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFAD 458
+ Y + DL + + H++ G E R F A Y+ + D+ +
Sbjct: 157 SASFYAEANPDLAAITQETLVSKFAHFLGVGQFENRRCSRVFDANNYLQLNPDVSQLLQE 216
Query: 459 AP--DLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ L HF G E R + FD YL DL S A H++ G
Sbjct: 217 SANLGLQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFG 276
Query: 515 VKEGRN 520
+ E R
Sbjct: 277 ISERRE 282
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 13/150 (8%)
Query: 345 RFADQCIDSVN--VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FD 400
F D ++ S Y + DL + + + HF G E R + FD
Sbjct: 140 HFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSKFAHFLGVGQFENRRCSRVFD 199
Query: 401 SYLYLGSYDDLRNVF--GSDRG---AAARHYITHGVKEGRN-PDAFKALEYIASHEDLIN 454
+ YL D+ + ++ G +A H+IT G E R + F EY+ + DL+
Sbjct: 200 ANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLVP 259
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
DH+ FG E R +
Sbjct: 260 FVESGEI---NAIDHWVRFGISERREFSLS 286
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 522 DAFKALEYIASHEDLINAF--ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
F Y+A + DL +A ++HF FG EGR + F+ YL
Sbjct: 67 QLFDEEVYLAQNPDLAQFKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNT 126
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALG 606
D+ V +R A H++ G+ E R
Sbjct: 127 DISLVI--NREEAFSHFLDFGLNEAREFS 153
>gi|126657191|ref|ZP_01728357.1| hypothetical protein CY0110_24721 [Cyanothece sp. CCY0110]
gi|126621462|gb|EAZ92173.1| hypothetical protein CY0110_24721 [Cyanothece sp. CCY0110]
Length = 1137
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/354 (20%), Positives = 130/354 (36%), Gaps = 51/354 (14%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-----IHSDIKFISSNNGYVC 90
+ + + E++ + R V+++ F E + DI+ SNN
Sbjct: 100 SYYGSESGVKEVSNAVKNSYREIFSWLENVINVDFVEVDEINKDTYGDIRIQDSNNPNYA 159
Query: 91 TPRYDSRYFMEINFDK---------ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
Y + + ++ D D + G +HE+GHALGL H S
Sbjct: 160 YAYYPTSAYSKVAGDVHLNSNYDRLGDTNGFQHDPGKHGYMTLVHELGHALGLSHTHS-- 217
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G E D+ SVM+Y + + AT M DI A+Q +YGA +
Sbjct: 218 ------GTPLSSELDNTDNSVMTY--------NFTGNSAATFMPLDIAALQHLYGAKSHN 263
Query: 202 LGNNIY------------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNT 247
G+ Y I + + + QT++DS G D LD + + + ++DL
Sbjct: 264 AGDTTYVFGNYIDQVSVNGISLVETSNRTKQTLWDSDGIDTLDFSGLNAQSSGFHLDLRG 323
Query: 248 ESW---SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + I+ +E+V+ SS +D + N+ N G D + +G
Sbjct: 324 GGLLSKTFSTTTSYSTAISYDFEVENVINSSSDDKIYLNNVKNEIR---GYDT-NRVTGN 379
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
D +Y + K+ + + + ++ L + D D+ N Q
Sbjct: 380 DKIYYATNEDILKLDYSSHEVTTRQSGQNLIINLGSNGSVELVDYYADTSNQIQ 433
>gi|32455983|ref|NP_861985.1| rb110 [Ruegeria sp. PR1b]
gi|22726335|gb|AAN05131.1| RB110 [Ruegeria sp. PR1b]
Length = 1365
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 89/246 (36%), Gaps = 37/246 (15%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGA 421
Y D+ V +++H+ FG EGR FD YL + S+
Sbjct: 26 YLEQNPDVADHF---VGSALEHYRHFGWREGRSPHPLFDVAWYLSQSPECL----SEGLE 78
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
HY+ G K+ R+P Y+ + DL+ A + ++ G +EGR
Sbjct: 79 PLTHYLHFGWKDMRSPHPVLNPAAYLRRNPDLMQADINP-------WLYYLQSGWQEGRS 131
Query: 481 --VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
FD+ YL Y+D+ HY+ G +EGR A + A + L
Sbjct: 132 LHPLFDTRWYLAVYEDVAEAG----IEPLSHYLRRGWREGRGAHPLFASGWYAETQQL-- 185
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
+ P L H+ G+ E R F+ Y SY D HY+
Sbjct: 186 GADENPWL------HYITTGWREMRPPHTRFDARWYHDSYLDPLVAVCD----PLVHYLE 235
Query: 597 HGMKEG 602
G +EG
Sbjct: 236 QGWREG 241
Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/215 (23%), Positives = 81/215 (37%), Gaps = 29/215 (13%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
D F S YL D+ + F G+A HY G +EGR+P F Y++ + ++
Sbjct: 18 DSLFQSDWYLEQNPDVADHF---VGSALEHYRHFGWREGRSPHPLFDVAWYLSQSPECLS 74
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
+ H+ +FG ++ R + YL DL +Y+
Sbjct: 75 EGLEP-------LTHYLHFGWKDMRSPHPVLNPAAYLRRNPDLMQA----DINPWLYYLQ 123
Query: 513 HGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
G +EGR+ F Y+A +ED+ A + H+ G+ EGR P
Sbjct: 124 SGWQEGRSLHPLFDTRWYLAVYEDVAEAGIEP-------LSHYLRRGWREGRGAH--PLF 174
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
Y + + + HYIT G +E R
Sbjct: 175 ASGWYAETQQLGADEN--PWLHYITTGWREMRPPH 207
Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDL 495
F++ Y+ + D+ + F V +H+ +FG EGR FD YL +
Sbjct: 19 SLFQSDWYLEQNPDVADHF------VGSALEHYRHFGWREGRSPHPLFDVAWYLSQSPEC 72
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
S+ HY+ G K+ R+P Y+ + DL+ A + ++
Sbjct: 73 L----SEGLEPLTHYLHFGWKDMRSPHPVLNPAAYLRRNPDLMQADINP-------WLYY 121
Query: 555 SNFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
G++EGRS F+ YL Y+D+ HY+ G +EGR
Sbjct: 122 LQSGWQEGRSLHPLFDTRWYLAVYEDVAEA----GIEPLSHYLRRGWREGRGAHP 172
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 47/154 (30%), Gaps = 20/154 (12%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFD 400
+ Y A YED+ + E + H+ G EGR F
Sbjct: 120 YYLQSGWQEGRSLHPLFDTRWYLAVYEDVAEA----GIEPLSHYLRRGWREGRGAHPLFA 175
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
S Y G+D HYIT G +E R P F A Y S+ D + A D
Sbjct: 176 SGWYAE-----TQQLGAD-ENPWLHYITTGWREMRPPHTRFDARWYHDSYLDPLVAVCDP 229
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
H+ G EG + +
Sbjct: 230 -------LVHYLEQGWREGLLPAPGADQLVAQQG 256
>gi|296532479|ref|ZP_06895198.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267196|gb|EFH13102.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 487
Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 84/220 (38%), Gaps = 32/220 (14%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDD 410
+ L Y + D++ + H+ +FG EGR FD YL D
Sbjct: 63 DTGTPLIADLAYQLANTDVLAA----GISAEAHYAQFGWREGRATGSLFDGAYYLRVNQD 118
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDH 469
+R HY+ G +EGR+P+ F Y+A + D+ A + +H
Sbjct: 119 VREA----GINPVEHYLNFGWREGRDPNPLFDTSFYLAQNADVAEAGINP-------LEH 167
Query: 470 FSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-RNPDAFKA 526
+ +G E R FD+ YL + +L + HY G +EG F
Sbjct: 168 YLLWGRHEARDANPFFDAGFYLQQHPELVEIGAD----PLAHYSEQGWREGIAASRGFIT 223
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
Y+A + D+ A D H+ +G EGR+++
Sbjct: 224 KVYLAQNPDVAAAGIDP-------LRHYLEYGQAEGRAVS 256
Score = 136 bits (343), Expect = 9e-30, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 32/217 (14%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
Y + D+ +A HY G +EGR + F Y+ ++D+
Sbjct: 66 TPLIADLAYQLANTDVLAA----GISAEAHYAQFGWREGRATGSLFDGAYYLRVNQDVRE 121
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A + +H+ NFG EGR FD+ YL D+ HY+
Sbjct: 122 AGINP-------VEHYLNFGWREGRDPNPLFDTSFYLAQNADVAEAG----INPLEHYLL 170
Query: 513 HGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNP 569
G E R+ + F A Y+ H +L+ AD H+S G+ EG + + F
Sbjct: 171 WGRHEARDANPFFDAGFYLQQHPELVEIGADP-------LAHYSEQGWREGIAASRGFIT 223
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
+YL D+ +HY+ +G EGRA+
Sbjct: 224 KVYLAQNPDVAAA----GIDPLRHYLEYGQAEGRAVS 256
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 10/121 (8%)
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F+ + + + + ++ +E + Y + +L+++
Sbjct: 145 FDTSFYLAQNADVAEAGINPLEHYLLWGRHEARDANPFFDAGFYLQQHPELVEI----GA 200
Query: 381 ESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ + H+ E G EG + F + +YL D+ G D RHY+ +G EGR
Sbjct: 201 DPLAHYSEQGWREGIAASRGFITKVYLAQNPDVAAA-GID---PLRHYLEYGQAEGRAVS 256
Query: 439 A 439
+
Sbjct: 257 S 257
>gi|254501672|ref|ZP_05113823.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222437743|gb|EEE44422.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 2061
Score = 143 bits (361), Expect = 9e-32, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 114/284 (40%), Gaps = 31/284 (10%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + + ++V ++GND + G + +++ F +GND+ +G + D Y S
Sbjct: 1773 GEGDDQLFGGAGDDTVGSTTGNDQIFGEAGDDLLFGGAGNDLLNGGANRDAALYGVTSDG 1832
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--------------SVNVKQRSI 361
+ + DA D L+ VE + F + +
Sbjct: 1833 VTLSGTRGTVTAVDA--GGTDTLTGVELVVFTGENTTGKDRVTVLLQDNAPVAGQYGFNE 1890
Query: 362 LEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSD 418
Y +++D+ + +F +H+ FG EGR D+ FD+ YL D+
Sbjct: 1891 AAYLGAHQDVAAAVAAGIFASGAEHYALFGQGEGRVVDLLFDAQFYLADNPDVAAAVTEG 1950
Query: 419 R-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+A+ HY HG E R+ + F Y+ +ED+ NA + HF +G +
Sbjct: 1951 IFASASEHYQLHGYAENRSLNPLFDGEYYLTQNEDVANAVGSGG--LDSAYHHFVLYGDQ 2008
Query: 477 EGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
EGR + FD+ Y GSD +A H++ G+ +G
Sbjct: 2009 EGRAASRFFDTAAYREEQG-----LGSD-ESALEHFLLVGLPQG 2046
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
F+ YLG++ D+ + A A HY G EGR D F A Y+A + D+ A
Sbjct: 1887 GFNEAAYLGAHQDVAAAVAAGIFASGAEHYALFGQGEGRVVDLLFDAQFYLADNPDVAAA 1946
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGS-DRSAAAQHYIT 596
+ + + +H+ GY E RS+ F+ + YLT +D+ N GS +A H++
Sbjct: 1947 VTEG--IFASASEHYQLHGYAENRSLNPLFDGEYYLTQNEDVANAVGSGGLDSAYHHFVL 2004
Query: 597 HGMKEGRALG 606
+G +EGRA
Sbjct: 2005 YGDQEGRAAS 2014
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 82/297 (27%), Gaps = 64/297 (21%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + + + V + T D+GG D L +
Sbjct: 1818 GANRDAALYGVTSDGVTLSGTRGTVTAVDAGGTDTLTGVEL------------------- 1858
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
V+ + ++G D V +N G G + Y
Sbjct: 1859 -----------VVFTGENTTGKDRVTVLLQDNA--------PVAGQYGFNEAAYLGAHQD 1899
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
F S E Q V Y A D+ +
Sbjct: 1900 VAAAVAAGI------------FASGAEHYALFGQGEGRVVDLLFDAQFYLADNPDVAAAV 1947
Query: 376 GQDVFESM-KHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGV 431
+ +F S +H+ G +E R + FD YL +D+ N GS +A H++ +G
Sbjct: 1948 TEGIFASASEHYQLHGYAENRSLNPLFDGEYYLTQNEDVANAVGSGGLDSAYHHFVLYGD 2007
Query: 432 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+EGR F Y + +HF G +G +
Sbjct: 2008 QEGRAASRFFDTAAYREEQ---------GLGSDESALEHFLLVGLPQGVSAPTTADF 2055
>gi|300866869|ref|ZP_07111544.1| hypothetical protein OSCI_3150008 [Oscillatoria sp. PCC 6506]
gi|300335119|emb|CBN56704.1| hypothetical protein OSCI_3150008 [Oscillatoria sp. PCC 6506]
Length = 830
Score = 142 bits (357), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/365 (19%), Positives = 120/365 (32%), Gaps = 31/365 (8%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
E +SS+GG I +E D+V + N F+ S + +GS D
Sbjct: 486 EQFSSVGGIPILFDI-NGKRLEQAKVRLKPDIVAPDGVNTTFYGLS-DPKGNGSFEADGL 543
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + A ++ + A D ++ +
Sbjct: 544 PNFFGTSAAAPNAAAVAALMLQVAPWATPNDVAIAMRVTAVDMNDPGTTAADPGFDFASG 603
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA-AARHY 426
Y L + FD YL Y + + H+
Sbjct: 604 YGFLNADRAMAMLA----------------LFDESFYLAQYPQVAAAVANKTFRNGFEHF 647
Query: 427 ITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--F 483
G EG NP A F Y+A + D+ ++ + + G DHF G +GR +
Sbjct: 648 ALFGQYEGLNPSAKFDNQLYLALNPDVAEQVSNG--VFRSGFDHFIKRGEFQGRDPRNLY 705
Query: 484 DSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
+ YL + + + H+I G EGR F Y+ + + A A
Sbjct: 706 NESYYLEQNSGVATFLSEKKFRSGYEHFILFGQFEGRKGSPFFDEQFYLEQNPKVAEAVA 765
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSD-RSAAAQHYITHG 598
L +G +HF+ G EGRS + N YL D+ + + +H++ G
Sbjct: 766 SG--LFSSGYEHFTKVGQFEGRSPSTLVNEVSYLRDNPDVAVAVKAGVYQSGIEHFVLFG 823
Query: 599 MKEGR 603
+E R
Sbjct: 824 QRENR 828
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 11/174 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y+A + + A A+ + G +HF+ FG EG + FD+ LYL D+
Sbjct: 619 FDESFYLAQYPQVAAAVAN--KTFRNGFEHFALFGQYEGLNPSAKFDNQLYLALNPDVAE 676
Query: 498 VFGSDRG-AAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + H+I G +GR+P + + Y+ + + ++ ++G +HF
Sbjct: 677 QVSNGVFRSGFDHFIKRGEFQGRDPRNLYNESYYLEQNSGVATFLSEKK--FRSGYEHFI 734
Query: 556 NFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALG 606
FG EGR S F+ YL + S S+ +H+ G EGR+
Sbjct: 735 LFGQFEGRKGSPFFDEQFYLEQNPKVAEAVASGLFSSGYEHFTKVGQFEGRSPS 788
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGR 395
F S + + + Y + + + F +HF FG EGR
Sbjct: 683 FRSGFDHFIKRGEFQGRDPRNLYNESYYLEQNSGVATFLSEKKFRSGYEHFILFGQFEGR 742
Query: 396 --DITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAF-KALEYIASHED 451
FD YL + S + H+ G EGR+P + Y+ + D
Sbjct: 743 KGSPFFDEQFYLEQNPKVAEAVASGLFSSGYEHFTKVGQFEGRSPSTLVNEVSYLRDNPD 802
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ A A + Q G +HF FG E R
Sbjct: 803 V--AVAVKAGVYQSGIEHFVLFGQRENRI 829
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 56/164 (34%), Gaps = 8/164 (4%)
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG-AAA 507
D AD G F N FD YL Y + +
Sbjct: 586 MNDPGTTAADPGFDFASGYG-FLNADRAMAMLALFDESFYLAQYPQVAAAVANKTFRNGF 644
Query: 508 RHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
H+ G EG NP A F Y+A + D+ ++ + ++G DHF G +GR
Sbjct: 645 EHFALFGQYEGLNPSAKFDNQLYLALNPDVAEQVSNG--VFRSGFDHFIKRGEFQGRDPR 702
Query: 567 --FNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALGI 607
+N YL + + + +H+I G EGR
Sbjct: 703 NLYNESYYLEQNSGVATFLSEKKFRSGYEHFILFGQFEGRKGSP 746
>gi|23011040|ref|ZP_00051528.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 301
Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/314 (23%), Positives = 121/314 (38%), Gaps = 46/314 (14%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY + + IY G+D D TL GG + + + + G
Sbjct: 5 DTIYGGDGSDQIIGEAGNDVIYGQDGNDYAAGNPGDDTLHGGRGDDFLVGEQGADLVYGD 64
Query: 257 EKNMTIAQH------------------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
E N +A +++ G +GND G+ N+ SG D
Sbjct: 65 EGNDFVAGGEDDDIVHGGDGDDLVDGDLGNDTLFGDAGNDTAFGDDGNDRMSGGSGIDTL 124
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DG+ G+DT + + ++ A ++ D + + E F+D+ I + Q
Sbjct: 125 DGALGVDTAVFDFAFAQAGVSSAGTLSVI--AGQNSTDTVKNTEIFEFSDRSIVQGDGNQ 182
Query: 359 R-SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
L Y + Y+D+ + + ++ H+ +G EGRD FD+ YL Y D+
Sbjct: 183 SVDDLFYFSHYDDVYK----NGIDAEAHYSTYGWKEGRDPNAFFDTKGYLTVYTDVAAA- 237
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
HY+T+G KEGR+P A F +Y+A + D+ A + H+ G
Sbjct: 238 ---GINPLEHYLTYGWKEGRDPSAQFDTKQYLAVNGDVAAAGINP-------LLHYLENG 287
Query: 475 CEEGRFVTFDSYLY 488
EGR D
Sbjct: 288 AVEGRATYDDGAFA 301
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/305 (21%), Positives = 106/305 (34%), Gaps = 58/305 (19%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N TI + ++G +GNDV+ G N+ + G+D G G D + L
Sbjct: 3 GNDTIYGGDGSDQIIGEAGNDVIYGQDGNDYAAGNPGDDTLHGGRGDDFLVGEQGADLVY 62
Query: 318 -------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI-LEYTASYE 369
+ E+ IV+ + F D D+ + + + +
Sbjct: 63 GDEGNDFVAGGEDDDIVHGGDGDDLVDGDLGNDTLFGDAGNDTAFGDDGNDRMSGGSGID 122
Query: 370 DLIQVIGQDVFESMKHFYEFGLS-------------------------EGRDI------- 397
L +G D F + G+S R I
Sbjct: 123 TLDGALGVDTAVFDFAFAQAGVSSAGTLSVIAGQNSTDTVKNTEIFEFSDRSIVQGDGNQ 182
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
+ D Y YDD+ + A HY T+G KEGR+P+A F Y+ + D+ A
Sbjct: 183 SVDDLFYFSHYDDVYK----NGIDAEAHYSTYGWKEGRDPNAFFDTKGYLTVYTDVAAAG 238
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ +H+ +G +EGR + FD+ YL D+ HY+ +G
Sbjct: 239 INP-------LEHYLTYGWKEGRDPSAQFDTKQYLAVNGDVAAAG----INPLLHYLENG 287
Query: 515 VKEGR 519
EGR
Sbjct: 288 AVEGR 292
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 16/99 (16%)
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNV 582
L Y + ++D+ D + H+S +G++EGR F+ YLT Y D+
Sbjct: 185 DDLFYFSHYDDVYKNGID-------AEAHYSTYGWKEGRDPNAFFDTKGYLTVYTDVAAA 237
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
+HY+T+G KEGR QF + L+
Sbjct: 238 ----GINPLEHYLTYGWKEGRD---PSAQFDTKQYLAVN 269
>gi|254415759|ref|ZP_05029517.1| hypothetical protein MC7420_3543 [Microcoleus chthonoplastes PCC
7420]
gi|196177465|gb|EDX72471.1| hypothetical protein MC7420_3543 [Microcoleus chthonoplastes PCC
7420]
Length = 393
Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 94/249 (37%), Gaps = 36/249 (14%)
Query: 364 YTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGR---DITFDSYLYLGSYDDLRNVFGSDR 419
Y A+Y D+ + +F + HF + GL EGR +++ YL + D+ +
Sbjct: 11 YLANYPDVATAVAAGLFGSGLDHFLKHGLGEGRVEISSSYEEDTYLDNNPDVAAAVTAGL 70
Query: 420 -GAAARHYITHGVKEGR------------NPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ HY +G EGR + F Y++ + D+ A G
Sbjct: 71 FSSGLEHYALYGQFEGRAGVFSDGVVPPASFSLFDESSYLSLNPDVAAAV--TAGAFNSG 128
Query: 467 KDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRN--- 520
+HF G +EGR ++ YL + D+ G G+ H+ HG E R
Sbjct: 129 FEHFQQLGLQEGRISSPLWNEGAYLAANPDVAAAVTGGAFGSGLHHFALHGQLENRPGAL 188
Query: 521 -----PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTS 575
P F Y+ + D+ A +G +H++ FG EGR F T
Sbjct: 189 PGALVPFGFNEEFYLLDNPDVAAAV--NAGGFGSGLEHYNEFGQFEGRGAYFGG----TP 242
Query: 576 YDDLWNVFG 584
DL FG
Sbjct: 243 GSDLVVAFG 251
Score = 137 bits (346), Expect = 5e-30, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 32/243 (13%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRN--PDAFKALEYIASHEDL 452
D+ FD +YL +Y D+ + G+ H++ HG+ EGR +++ Y+ ++ D+
Sbjct: 3 DVLFDESVYLANYPDVATAVAAGLFGSGLDHFLKHGLGEGRVEISSSYEEDTYLDNNPDV 62
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRF-------------VTFDSYLYLGSYDDLRNVF 499
A L G +H++ +G EGR FD YL D+
Sbjct: 63 AAAV--TAGLFSSGLEHYALYGQFEGRAGVFSDGVVPPASFSLFDESSYLSLNPDVAAAV 120
Query: 500 -GSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ H+ G++EGR + + Y+A++ D+ A +G HF+
Sbjct: 121 TAGAFNSGFEHFQQLGLQEGRISSPLWNEGAYLAANPDVAAAVTGG--AFGSGLHHFALH 178
Query: 558 GYEEGR---------SITFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGRALGI 607
G E R FN + YL D+ + + +HY G EGR
Sbjct: 179 GQLENRPGALPGALVPFGFNEEFYLLDNPDVAAAVNAGGFGSGLEHYNEFGQFEGRGAYF 238
Query: 608 SGM 610
G
Sbjct: 239 GGT 241
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 59/168 (35%), Gaps = 18/168 (10%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGR--DITFDSY 402
F+D + + Y + D+ + F +HF + GL EGR ++
Sbjct: 91 FSDGVVPPASFSLFDESSYLSLNPDVAAAVTAGAFNSGFEHFQQLGLQEGRISSPLWNEG 150
Query: 403 LYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRN--------PDAFKALEYIASHEDLI 453
YL + D+ G G+ H+ HG E R P F Y+ + D+
Sbjct: 151 AYLAANPDVAAAVTGGAFGSGLHHFALHGQLENRPGALPGALVPFGFNEEFYLLDNPDVA 210
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
A G +H++ FG EGR F DL FG
Sbjct: 211 AAV--NAGGFGSGLEHYNEFGQFEGRGAYFGG----TPGSDLVVAFGG 252
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 47/151 (31%), Gaps = 13/151 (8%)
Query: 298 FDGSSG--LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
F+G +G D A L+ + + A F S E + ++
Sbjct: 84 FEGRAGVFSDGVVPPASFSLFDESSYLSLNPDVAAAVTAGAFNSGFEHFQQLGLQEGRIS 143
Query: 356 VKQRSILEYTASYEDLIQVI-GQDVFESMKHFYEFGLSEGR---------DITFDSYLYL 405
+ Y A+ D+ + G + HF G E R F+ YL
Sbjct: 144 SPLWNEGAYLAANPDVAAAVTGGAFGSGLHHFALHGQLENRPGALPGALVPFGFNEEFYL 203
Query: 406 GSYDDLRNVFGSDR-GAAARHYITHGVKEGR 435
D+ + G+ HY G EGR
Sbjct: 204 LDNPDVAAAVNAGGFGSGLEHYNEFGQFEGR 234
Score = 40.9 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGRALGISGMQFKSVMN 617
F+ +YL +Y D+ + + H++ HG+ EGR S + + ++
Sbjct: 6 FDESVYLANYPDVATAVAAGLFGSGLDHFLKHGLGEGRVEISSSYEEDTYLD 57
>gi|226328851|ref|ZP_03804369.1| hypothetical protein PROPEN_02752 [Proteus penneri ATCC 35198]
gi|225202037|gb|EEG84391.1| hypothetical protein PROPEN_02752 [Proteus penneri ATCC 35198]
Length = 264
Score = 141 bits (355), Expect = 4e-31, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 15/215 (6%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQQ---------KDSPFIQTIYDSGGDD 229
TP + DI A+Q+ YG K + GN IY + + I+D+GG D
Sbjct: 3 PLTPQLMDICAIQETYGQNKATRIGNTIYGFNSNTKKDYYSLKTSEDKIVACIWDTGGID 62
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LD + V IDLN S+S +GG N++IA VIE+ +G S D++ GN ANN
Sbjct: 63 TLDFSKYT-VDQKIDLNEGSFSDVGGLRANISIAYDAVIENAIGGSQTDIISGNDANNRL 121
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
F G D G G D + + + + + N+ D SD + Q
Sbjct: 122 FGKLGEDTLYGKGGNDILYGGQGNDHLYGEKGNDYLYGEQDNDVLVD--SDGNDHLYGGQ 179
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + + + +D+ + G D + +
Sbjct: 180 GDDYLWDSEGDNILDGGLGDDV--LFGGDGDDELN 212
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 17/140 (12%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+Y GG+D+L GG N + + G + N + + + G G+D
Sbjct: 128 DTLYGKGGNDIL----YGGQGNDHLYGEKGNDYLYGEQDNDVLVDSDGNDHLYGGQGDDY 183
Query: 280 VI---------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY----RFENAII 326
+ G ++V F G+D +G G D + K F
Sbjct: 184 LWDSEGDNILDGGLGDDVLFGGDGDDELNGGEGNDHLDPGMGNNTLKGGTGYDTFSFNTQ 243
Query: 327 VYDANEHKQDFLSDVERLRF 346
D++ DF S +++L F
Sbjct: 244 DNDSSNIITDFESGIDKLFF 263
>gi|218438239|ref|YP_002376568.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7424]
gi|218170967|gb|ACK69700.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7424]
Length = 1067
Score = 141 bits (354), Expect = 5e-31, Method: Composition-based stats.
Identities = 66/324 (20%), Positives = 111/324 (34%), Gaps = 43/324 (13%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYL 405
+ Y +L + E + H+ + G EGRD FD+ YL
Sbjct: 88 EMAQLISQSGLFDADFYGEKNPELKK----SQVEPLSHYLDIGSVEGRDPHPLFDTQYYL 143
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQ 464
++ + + HYI G G+NP F YI + D+ + +
Sbjct: 144 KQNPEV----AASQINPLVHYILVGALNGKNPHPLFNTAYYIEKNLDVGESGMNP----- 194
Query: 465 VGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
H+ N G +EGR FD+ Y+ Y +L S HY+ G K+ NP+
Sbjct: 195 --LVHYINHGAKEGRNPHPLFDTSYYVERYLNLI----SPTINPLVHYLQQGAKQRYNPN 248
Query: 523 A-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYL-TSYDD 578
F YI + L+ +L H+ N G ++G F+ YL S D
Sbjct: 249 PLFDTSFYIQQNPKLL-------ELETNPLIHYINIGAKQGLNPHPLFDTAFYLKQSQTD 301
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALG--ISGMQFKSVMNLSEKSRDKADLSLSFDHKK 636
L + H+ G EGR + + + + K
Sbjct: 302 LVH------HDPLAHFFEFGALEGRDPHPLFDTSYYVERYSQLIPQGMNPLVHYLQEGAK 355
Query: 637 VDLYTDYFGDGNYYDSDLYSMHDI 660
+ + D ++Y + ++ D+
Sbjct: 356 LGYNPNPLFDTSFYLEENATIFDL 379
Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 97/276 (35%), Gaps = 44/276 (15%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLR 412
+ Y D+ G+ + H+ G EGR+ FD+ Y+ Y +L
Sbjct: 171 PHPLFNTAYYIEKNLDV----GESGMNPLVHYINHGAKEGRNPHPLFDTSYYVERYLNLI 226
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ HY+ G K+ NP+ F YI + L+ +L H+
Sbjct: 227 SP----TINPLVHYLQQGAKQRYNPNPLFDTSFYIQQNPKLL-------ELETNPLIHYI 275
Query: 472 NFGCEEGRF--VTFDSYLYL-GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
N G ++G FD+ YL S DL D A H+ G EGR+P F
Sbjct: 276 NIGAKQGLNPHPLFDTAFYLKQSQTDL---VHHDPLA---HFFEFGALEGRDPHPLFDTS 329
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGS 585
Y+ + LI + H+ G + G + F+ YL ++++
Sbjct: 330 YYVERYSQLIPQGMNP-------LVHYLQEGAKLGYNPNPLFDTSFYLEENATIFDLE-- 380
Query: 586 DRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
HYI G ++G F + L +
Sbjct: 381 --INPLIHYINIGFRQGLN---PHPLFDTAFYLKQL 411
Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 81/271 (29%), Gaps = 41/271 (15%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFD 400
Y L+++ + H+ G +G + FD
Sbjct: 235 HYLQQGAKQRYNPNPLFDTSFYIQQNPKLLEL----ETNPLIHYINIGAKQGLNPHPLFD 290
Query: 401 SYLYL-GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
+ YL S DL + H+ G EGR+P F Y+ + LI +
Sbjct: 291 TAFYLKQSQTDLVH------HDPLAHFFEFGALEGRDPHPLFDTSYYVERYSQLIPQGMN 344
Query: 459 APDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
H+ G + G FD+ YL + ++ HYI G +
Sbjct: 345 P-------LVHYLQEGAKLGYNPNPLFDTSFYLEENATIFDL----EINPLIHYINIGFR 393
Query: 517 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYL 573
+G NP F Y+ + + HF G +G F+ YL
Sbjct: 394 QGLNPHPLFDTAFYL-------KQLGSSLEPRINPLIHFLEIGACQGLDPHPLFDTSHYL 446
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
D+ + H++ G E R
Sbjct: 447 EKNSDVRESGMN----PLVHFVQFGAIEKRE 473
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 66/215 (30%), Gaps = 32/215 (14%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
Y Y LI + H+ + G G + FD+ YL +
Sbjct: 322 PHPLFDTSYYVERYSQLIP----QGMNPLVHYLQEGAKLGYNPNPLFDTSFYLEENATIF 377
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
++ HYI G ++G NP F Y+ + + HF
Sbjct: 378 DL----EINPLIHYINIGFRQGLNPHPLFDTAFYLKQLGSSLEPRINP-------LIHFL 426
Query: 472 NFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
G +G FD+ YL D+R H++ G E R P + +
Sbjct: 427 EIGACQGLDPHPLFDTSHYLEKNSDVRESG----MNPLVHFVQFGAIEKREPFSISEMLP 482
Query: 530 --------IASHEDLINAFADAPDLVQAGKDHFSN 556
+ + +D + PD + + ++
Sbjct: 483 EMESQNWELKNFKDFSCPKSPNPDYQKWLQKNYPT 517
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGS 407
I L TA Y + + + HF E G +G D FD+ YL
Sbjct: 389 NIGFRQGLNPHPLFDTAFYLKQLGSSLEPRINPLIHFLEIGACQGLDPHPLFDTSHYLEK 448
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D+R H++ G E R P
Sbjct: 449 NSDVRE----SGMNPLVHFVQFGAIEKREP 474
>gi|119487881|ref|ZP_01621378.1| hypothetical protein L8106_28496 [Lyngbya sp. PCC 8106]
gi|119455457|gb|EAW36595.1| hypothetical protein L8106_28496 [Lyngbya sp. PCC 8106]
Length = 2050
Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 90/221 (40%), Gaps = 16/221 (7%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
D FD YL D++ + + + A H++ G EGR +F EY + D+
Sbjct: 133 DELFDVDAYLEFNSDIKTLVEAGQLDAKAHFMEFGKFEGREFSYSFNITEYAEKNVDVSQ 192
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSD--RGAAARHY 510
+ Q HF FG EEGR F YL D+ NVF + RH+
Sbjct: 193 VVSR-----QSLLSHFLEFGLEEGREFNSLFSVKKYLEKNTDIDNVFQGQGKFVSGFRHF 247
Query: 511 ITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--F 567
+ G E R D FK EY++ + DL +F + HF+ FG +E R + F
Sbjct: 248 LKFGQYEQRECGDFFKPSEYLSLNSDL-ESFVQGGQF--SLFKHFNKFGKKERREFSNFF 304
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
YL +L + S + A H++ G E R S
Sbjct: 305 KVSEYLQLNQELVDFVQSGQITAVDHWLQFGRLENREFSFS 345
>gi|294789235|ref|ZP_06754474.1| extracellular metalloprotease [Simonsiella muelleri ATCC 29453]
gi|294482976|gb|EFG30664.1| extracellular metalloprotease [Simonsiella muelleri ATCC 29453]
Length = 839
Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/414 (18%), Positives = 126/414 (30%), Gaps = 73/414 (17%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYF----MEI 102
++ + Q V R AL SK ++TF E + N + S +
Sbjct: 416 MSADNQAVIRQALDLISKYTNITFREVDSVQESDLDFYLNDFAALGMDGSLGYAYFGGNA 475
Query: 103 NFDKADVWRYGI-----GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+F+ D +HEI H +GL HP P E +S
Sbjct: 476 HFNSNDFGGNYSFKQPANDNNKGLFTVIHEILHTVGLKHPHL-EEKEPNTTPHLSDEKNS 534
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDS 216
+VMSY F + P + D+ + +YG K +N Y + S
Sbjct: 535 TGVTVMSY-------KADDFERVSEPHIYDLAILHYLYGVNPKARAEDNTYTFHMFNPSS 587
Query: 217 PFIQT-IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM--------------- 260
I+D G D D + N +DL SW N
Sbjct: 588 NDGDIYIWDGAGVDTFDASQEAKGVN-VDLTPGSWIYADASNTNTRDFGLINTHGIDYDS 646
Query: 261 ----------------------------TIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
I +T IE+++GS+ ND++ GN+A+N+ +
Sbjct: 647 YFSGGNKEAGTSAGSSGVFAYNYTDGVSFIGYNTQIENLLGSAHNDILKGNAADNIIQGN 706
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQ 349
GND G++G DT + D L+ + F
Sbjct: 707 DGNDQIYGNAGNDTLIGG----IGNDTLDGGDGDDVLMGGLGLDTLTGGAGADTFVF--N 760
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ K T L + D H ++ G +++D+
Sbjct: 761 NVPDYADKITDFTVGTDKIALLKGIFASDTLTDFAHHIQYNAQTG-ALSYDADG 813
>gi|254503616|ref|ZP_05115767.1| von Willebrand factor type A domain protein [Labrenzia alexandrii
DFL-11]
gi|222439687|gb|EEE46366.1| von Willebrand factor type A domain protein [Labrenzia alexandrii
DFL-11]
Length = 609
Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 106/293 (36%), Gaps = 54/293 (18%)
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+++F +G DG G D + + IV + N+ L ++E
Sbjct: 361 DGDDIFTIVTGIARLDGQKGTDVVTISSNLADVSLSTNRIGEIVLEDNDGTSVILENIEF 420
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ D I ++ +FD
Sbjct: 421 VLANDGMIMVAPPERA--------------------------------------SFDEAF 442
Query: 404 YLGSYDDLRNVFGSDRG--AAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAP 460
YL Y D+ + G+ G + HY+ G+ EGR F Y+ +ED++ A
Sbjct: 443 YLSLYSDVASAVGTSGGFESGLAHYLQLGIFEGRLGAFPFNEEFYLNENEDILAAVQ--A 500
Query: 461 DLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
GK+HF G EGR FD+ YL D+ + A +HY+ G +EG
Sbjct: 501 GSFSSGKEHFILHGMFEGRDPVSLFDTEYYLDQNSDVEAAVTAGAITAYQHYLLSGSQEG 560
Query: 519 RNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
R P + F +Y + ++D+ D HF G EGRSI+ +PD
Sbjct: 561 RRPSNLFSEGDYYSVNQDVAVVGID-------AFIHFYGMGVAEGRSIS-DPD 605
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 14/179 (7%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYD 493
+F Y++ + D+ +A + + G H+ G EGR F+ YL +
Sbjct: 434 ERASFDEAFYLSLYSDVASAVGTSGG-FESGLAHYLQLGIFEGRLGAFPFNEEFYLNENE 492
Query: 494 DLRNVFGSDRGA-AARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGK 551
D+ + + H+I HG+ EGR+P F Y+ + D+ A
Sbjct: 493 DILAAVQAGSFSSGKEHFILHGMFEGRDPVSLFDTEYYLDQNSDVEAAVTAG---AITAY 549
Query: 552 DHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
H+ G +EGR + F+ Y + D+ V A H+ G+ EGR++
Sbjct: 550 QHYLLSGSQEGRRPSNLFSEGDYYSVNQDVAVV----GIDAFIHFYGMGVAEGRSISDP 604
>gi|152991140|ref|YP_001356862.1| hypothetical protein NIS_1398 [Nitratiruptor sp. SB155-2]
gi|151423001|dbj|BAF70505.1| hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 609
Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats.
Identities = 79/376 (21%), Positives = 125/376 (33%), Gaps = 93/376 (24%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDK 106
LN Q R A E V+ + FEE + DI+F V D F
Sbjct: 248 LNLIDQSRVREAFHELGSVLGVRFEEVDSNGDIRFS-----KVTPSSQDEAGFAVQEIYD 302
Query: 107 ADVWRYGIGKGTILSH----------NALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ G+G L++ LHEIGHA GL HP + P D
Sbjct: 303 GKMVTSGVGSDIFLANDYDVIAAPKDVILHEIGHAFGLKHPFEGSPTMPSSY-------D 355
Query: 157 SFLTSVMSYFMPQ---------DSMMDASFGYCATPMV------SDIVAVQKIYGAPKGS 201
+ L ++MSY + + + P+ D++A++ +YG+ +
Sbjct: 356 NTLYTIMSYTQEETALPEITMKNLGDSFEYTVQTDPIGRKSIGYYDLLALRYLYGSTEHD 415
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-SSIGGY---- 256
L N Y I F I D GG D + L YIDL + SSIG +
Sbjct: 416 LTNETYDISDLYNQHAFAH-IVDDGGIDTVVL--DSQEPAYIDLRGGEFLSSIGDHLPFN 472
Query: 257 -------------------------------------------EKNMTIAQHTVIESVVG 273
KN+ IE++V
Sbjct: 473 SIKQQIQEQMSLEDIPSSYFDDIYAGVLDIIQQNPSFKAQIYQGKNVVTLPENSIENIVA 532
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-----YRFENAIIVY 328
+ ++++ N+ +N SGND+ S G DT + + I+Y
Sbjct: 533 TGADEIIYDNALDNRIITGSGNDIIYVSQGDDTIDGGEGIDTVYLPDKQYQEIQTDGILY 592
Query: 329 DANEHKQDFLSDVERL 344
++ + L ++E +
Sbjct: 593 LVSDDQVIALQNIEHI 608
>gi|193076786|gb|ABO11503.2| Hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
17978]
Length = 3298
Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats.
Identities = 73/377 (19%), Positives = 134/377 (35%), Gaps = 53/377 (14%)
Query: 35 LTTHRLSFDITE---LNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKFISSNNGYVC 90
+T + D++ P AL ++++++++ F ++ D+KF +
Sbjct: 1358 ITYAFPANDLSNHQYYTPEQVIAVGKALNKFAEILNIQFVQSEMGSGDLKFYLDDLSSAD 1417
Query: 91 TPRYDSRYFMEINFDKADV----WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ + +G+G+ LHEI HALGL HP
Sbjct: 1418 ASAAAGYASAQTGEIHLNSLIFEVSSDLGEGSNGFEVLLHEISHALGLKHPFE------- 1470
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNN 205
++ ++MSY + + + D+ ++Q ++G +GN+
Sbjct: 1471 -APVLPELENNQNNTLMSYTSNGVNDTN--------LKLYDLASLQYLHGVNQNVHVGND 1521
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY------EKN 259
Y + I+D G D + + YIDLN WS IG E
Sbjct: 1522 TYTFADKY--------IWDGNGIDTFNAFTLT-QNVYIDLNAGGWSYIGQKSQSILDEGQ 1572
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDT----------F 307
I TVIE+ +G G+D +I N+ANN+ +G D F+G+ G D
Sbjct: 1573 TFIGYGTVIENAIGGIGDDTLISNAANNLLQGGAGKDTYIFNGNFGHDQIIDVDHNNKII 1632
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ E+ I++ ++N Q ++ E + N + Y +
Sbjct: 1633 ILNNGFDNLNLVLAEDTILLLNSNSSIQLDINQFESIIINGITY-LKNDFIANFGGYISV 1691
Query: 368 YEDLIQVIGQDVFESMK 384
D Q+ +
Sbjct: 1692 NHDYFLESNQNNVVILG 1708
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+T+ + I+++ G+SGND + G + N+V + SGND +G +G DT + ++ I
Sbjct: 2955 NLTVNGTSSIDTLYGASGNDTITGLAGNDVLYGQSGNDTLNGGTGNDTMYGGKGDDIFVI 3014
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ--VIG 376
I+ + NE S + + ++ A L+ I
Sbjct: 3015 -DSSTDIVNENVNEGIDTVQSSITYSLGNNVENLTLTGTTAINGTGNALNNTLLGNSAIN 3073
Query: 377 QDVFESMKHFYEFGLSEGR 395
+ + + G +
Sbjct: 3074 TLTDGAGDDYLDGGAGNDK 3092
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 16/153 (10%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------------DLTLIGGVKN 241
AP S + Y I+ +GGDD++ D
Sbjct: 1044 APPTSADSTRYG-NDLIFGGKGEYQIWSNGGDDIIFGGTDKDYIDGGEGNDYLYGDNEDQ 1102
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
ID++ + + G + + + + + G ND++ G + +++ GND+ G
Sbjct: 1103 LIDIDGKEKDDVFGGKGDDFLFGGAGNDQLYGGKDNDILYGGANDDLIKGEDGNDIIYGG 1162
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G D F + N I D+ +
Sbjct: 1163 DGNDIFLFGGEGNDILYGEDANDKIHGDSGDDI 1195
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 59/186 (31%), Gaps = 30/186 (16%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+YG + L + K + ++ G+D L GG N I +
Sbjct: 1094 YLYGDNEDQLIDIDGKEKDDVFGGKGDDFLFGGAGNDQL----YGGKDNDILYGGANDDL 1149
Query: 253 IGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + N I + + G GND++ G AN+ SG+D+ G +G D
Sbjct: 1150 IKGEDGNDIIYGGDGNDIFLFGGEGNDILYGEDANDKIHGDSGDDIIFGGTGNDNLQGGQ 1209
Query: 312 PSYLYKIYRFE-------------------------NAIIVYDANEHKQDFLSDVERLRF 346
S LY + N+ + D + ++
Sbjct: 1210 GSDLYVFSIGDGTDTIVEEVSDIASLNYQNFIYFTFNSDQIRGVIRDGYDLIIKYDQYNQ 1269
Query: 347 ADQCID 352
DQ I
Sbjct: 1270 DDQVIV 1275
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 6/136 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L N + L T + I G + + I ++ ++ GND + G N+
Sbjct: 1694 DYFLESNQNNVVILGTGDF-HIVGNDLDNKIIGNSGNNTISAGDGNDTLQGGFGNDEING 1752
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-----SDVERLRF 346
+G+D G G D + + Y + ++ D++ + +L + +
Sbjct: 1753 GTGDDTLIGGLGNDVLYGGLGNDQYIFKDNDGDDVIVDSDGLNKIYLNHSLSNQISLHVI 1812
Query: 347 ADQCIDSVNVKQRSIL 362
+D + + +IL
Sbjct: 1813 SDGDLTITYGENSNIL 1828
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 27/157 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G LGN++Y ++ + G D + ++ ++G +N
Sbjct: 3095 GGLGNDVYVVDSTTDTITENT----NEGIDTVRSSVTY--------------TLGNNLEN 3136
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL---- 315
+T+ T I + G++ N+ +IGN+ N+ +GND+ DG G D F S
Sbjct: 3137 LTLTGTTAI-NATGNALNNTLIGNNEVNILNGGAGNDILDGQGGNDQFTGGTGSDTLIYQ 3195
Query: 316 ----YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ D + +++ F D
Sbjct: 3196 LLIASEATGGNGTDSWSDFTVGNVSTNMNADKIDFGD 3232
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 14/181 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIA 263
+ + IY GGDD + D L GG + +L+ + + + G + + +
Sbjct: 421 NIDIQGGDGNDHIYGGGGDDEIYGGEGDDYLEGGHGSD-ELHGGNDNDKLVGMDGDNYLY 479
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++G + D + G S N+ SG D+ DG +G D P++L N
Sbjct: 480 GDDGNDLLLGGADKDELYGGSGNDYLNGGSGADLLDGGTGNDILVGG-PNWLIAEGGEGN 538
Query: 324 AIIVYDANE----HKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
II D N+ + D LS + + ++ + + + Y+A+ +D+I
Sbjct: 539 DIIFADPNKVSNLERVDELSGGAGNDIFYGSIGPSNIKGAEGNDIIYSANGQDIITGGDG 598
Query: 378 D 378
+
Sbjct: 599 N 599
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 10/200 (5%)
Query: 206 IYKIEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
Y +PF+ I+ + L+LT I + D ++ G + I
Sbjct: 901 TYFFTENGVITPFLLPGINIFSDIASNTLNLTSIYSLLETDDGGALGADTVYGGLGDDFI 960
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++ G +D + G ++ + +G DV G +G D + K+
Sbjct: 961 LGSGSVDNLYGDENSDHLYGRGGDDYLYGGTGKDVVYGGAGRD--YISGGDDDDKLIGGY 1018
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-- 380
A ++Y + + + + + + L + E I G D
Sbjct: 1019 EADVIYGGEGNDNITGDLLNLFGTTAPPTSADSTRYGNDLIFGGKGEYQIWSNGGDDIIF 1078
Query: 381 -ESMKHFYEFGLSEGRDITF 399
+ K + + G EG D +
Sbjct: 1079 GGTDKDYIDGG--EGNDYLY 1096
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 76/253 (30%), Gaps = 61/253 (24%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKN-YID 244
Q Y S+ + I+ + + IY G+D +++ T+ GG N I
Sbjct: 2302 TQYNYTDSNDSISDLIHSSNISGYYNN--HYIYAKDGNDTIEIMEVTSTVYGGNGNDSIT 2359
Query: 245 LNTESWSSIGGYEKNMTIAQHTVI---ES-----------VVGSSGNDVV-------IGN 283
L + G E N IA + I E+ G GND + G
Sbjct: 2360 LKSG---DAYGGEGNDAIAINNGIAYGENGDDLIIIQAGDAYGGDGNDSITILTDASYGG 2416
Query: 284 SANNVF------FESSGNDVF---------DGSSGLDTFFYYAPSYLY-----KIYRFEN 323
N+V + G+D +G G D + + Y I + EN
Sbjct: 2417 DGNDVLMGSGQFYGGKGDDTLIANNDSAYMNGGEGADILQGGSGNDTYIVDELDILQLEN 2476
Query: 324 AIIVYDANEHKQDF---------LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
YD ++ D +E F+D + I +Y D
Sbjct: 2477 ETGGYDTIVYQYDVGNIDLANSQFEAIELFGFSDSYLLGNTANNSLIGNSGNNYLDGRTG 2536
Query: 375 IGQDVFESMKHFY 387
+ +Y
Sbjct: 2537 SDYMAGGAGDDYY 2549
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 10/130 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GND + G ++ + G+D +G G D + +N + D
Sbjct: 424 IQGGDGNDHIYGGGGDDEIYGGEGDDYLEGGHGSDELHGGNDNDKLVGMDGDNYLYGDDG 483
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
N+ E + + +L+ + L+ E G
Sbjct: 484 NDLLLGGADKDELYGGSGNDYLNGGSGA-DLLDGGTGNDILVGG-------PNWLIAEGG 535
Query: 391 LSEGRDITFD 400
EG DI F
Sbjct: 536 --EGNDIIFA 543
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 30/80 (37%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ ++GN+ANN +SGN+ DG +G D A Y + + I D N
Sbjct: 2507 GFSDSYLLGNTANNSLIGNSGNNYLDGRTGSDYMAGGAGDDYYVVDVTDTIITDEDGNTR 2566
Query: 334 KQDFLSDVERLRFADQCIDS 353
D E I+
Sbjct: 2567 IIDGDQVAEDFDAGTDTIEL 2586
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 11/160 (6%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN-------- 286
L GG N I + S+I G E N I + + G GND++ G S
Sbjct: 557 LSGGAGNDIFYGSIGPSNIKGAEGNDIIYSANGQDIITGGDGNDIIYGYSGEDTTESTIR 616
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER--- 343
N +GND+ GS D + + + + I+ + +++
Sbjct: 617 NNLSGGTGNDLIYGSVNSDFIEGGVGTNILEGKESVDNYIITENEGLGLGTQYIIDQDGR 676
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ + + Y+++ +I+ +G+ + +
Sbjct: 677 IQINLATLAVGTYDENIRAWYSSNNLYIIRKLGEGTDKEI 716
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 62/359 (17%), Positives = 111/359 (30%), Gaps = 64/359 (17%)
Query: 60 GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+ + +L + S H DI F + T Y YF N
Sbjct: 866 ATLADLTNLITNDASSHWDINFNFTKQWSEETQSY--TYFFTEN---------------- 907
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
G++ P G + ++ N + + S++ D +G
Sbjct: 908 -------------GVITPFLLPGINIFSDIASNTLNLTSIYSLLETDDGGALGADTVYGG 954
Query: 180 CATPMVSDIVAVQKIYGAPKGS----LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
+ +V +YG G + Y KD +Y G D +
Sbjct: 955 LGDDFILGSGSVDNLYGDENSDHLYGRGGDDYLYGGTGKD-----VVYGGAGRDYI---- 1005
Query: 236 IGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSS-----------GNDVVIGN 283
G + L + I G E N I + ++ G++ GND++ G
Sbjct: 1006 -SGGDDDDKLIGGYEADVIYGGEGNDNITGDLL--NLFGTTAPPTSADSTRYGNDLIFGG 1062
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + G+D+ G + D + Y E+ +I D E F +
Sbjct: 1063 KGEYQIWSNGGDDIIFGGTDKDYIDGGEGND-YLYGDNEDQLIDIDGKEKDDVFGGKGDD 1121
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF---ESMKHFYEFGLSEGRDITF 399
F D + + + + Y + +DLI+ + + FG EG DI +
Sbjct: 1122 FLFGGAGNDQLYGGKDNDILYGGANDDLIKGEDGNDIIYGGDGNDIFLFG-GEGNDILY 1179
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 13/159 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQ---TIYD-SGGDDLLDLTLIGGVKNYIDLNTES-WS 251
+ Y + TI++ D + I G +N ++++E +
Sbjct: 2041 TNFKDTMSTRYGFSESYSIAELEFSDGTIWNYKKIIDNISKVEIFGTENNDEIHSEDILN 2100
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--------GSSG 303
+I N I G G+D + G + N+ F SGND G G
Sbjct: 2101 TIYAKGGNDNIITGNKGSVTYGGDGDDNISGGTGKNIIFGDSGNDNIYNYGEGSLFGGDG 2160
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
D SYL ++ I D+N H ++D +
Sbjct: 2161 DDRLSGGDRSYLDGGNGYDIYNISEDSNVHGNYKITDAD 2199
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 5/108 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E N I ++ ++ GND +I + +V + G+D G +G + F +
Sbjct: 2084 IFGTENNDEIHSEDILNTIYAKGGNDNIITGNKGSVTYGGDGDDNISGGTGKNIIFGDSG 2143
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ IY + + D LS +R +
Sbjct: 2144 NDN--IYNYGEGSLF---GGDGDDRLSGGDRSYLDGGNGYDIYNISED 2186
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+S+ G N ++ T + + G++GN+ + G ++ D+ G G D +
Sbjct: 772 TSVNGASGNDYLSGTTGNDIIDGANGNNFINGLDGDDTLKGGDNQDIILGGVGKDKIYGG 831
Query: 311 APSYL 315
L
Sbjct: 832 DGEDL 836
Score = 40.9 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
N++ GND G G DT+ + + KIY F + D K L+
Sbjct: 1932 GNDIIIGGKGNDSLFGGRGNDTYIFNRGDGVDKIYDFYTYLDNSDEMNAKVTELNW 1987
Score = 40.5 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 22/135 (16%)
Query: 200 GSLGNNIYKIEVQQK---DSPFIQTIYDSG--------GDDLLDLTLIG-GVKNYIDLNT 247
G G++ Y ++V D I D G D ++L + + N
Sbjct: 2542 GGAGDDYYVVDVTDTIITDEDGNTRIIDGDQVAEDFDAGTDTIELWQDARFIGQDENGNP 2601
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ E N IE++V GN +N+ ++ ++ DG G DT+
Sbjct: 2602 VLTNNYRLLEDN--------IENLVLKGSAKTAFGNGLDNIITSNAQDNYIDGLGGDDTY 2653
Query: 308 FY--YAPSYLYKIYR 320
Y + Y Y
Sbjct: 2654 IYTKGGGTDTYSFYD 2668
>gi|126641121|ref|YP_001084105.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
17978]
Length = 3216
Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats.
Identities = 72/377 (19%), Positives = 133/377 (35%), Gaps = 53/377 (14%)
Query: 35 LTTHRLSFDITE---LNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKFISSNNGYVC 90
+T + D++ P AL ++++++++ F ++ D+KF +
Sbjct: 1276 ITYAFPANDLSNHQYYTPEQVIAVGKALNKFAEILNIQFVQSEMGSGDLKFYLDDLSSAD 1335
Query: 91 TPRYDSRYFMEINFDKADV----WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ + +G+G+ LHEI HALGL HP
Sbjct: 1336 ASAAAGYASAQTGEIHLNSLIFEVSSDLGEGSNGFEVLLHEISHALGLKHPFE------- 1388
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNN 205
++ ++MSY + + + D+ ++Q ++G +GN+
Sbjct: 1389 -APVLPELENNQNNTLMSYTSNGVNDTN--------LKLYDLASLQYLHGVNQNVHVGND 1439
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------KN 259
Y + I+D G D + + YIDLN WS IG
Sbjct: 1440 TYTFADKY--------IWDGNGIDTFNAFTLT-QNVYIDLNAGGWSYIGQKSQSILDEGQ 1490
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDT----------F 307
I TVIE+ +G G+D +I N+ANN+ +G D F+G+ G D
Sbjct: 1491 TFIGYGTVIENAIGGIGDDTLISNAANNLLQGGAGKDTYIFNGNFGHDQIIDVDHNNKII 1550
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ E+ I++ ++N Q ++ E + N + Y +
Sbjct: 1551 ILNNGFDNLNLVLAEDTILLLNSNSSIQLDINQFESIIINGITY-LKNDFIANFGGYISV 1609
Query: 368 YEDLIQVIGQDVFESMK 384
D Q+ +
Sbjct: 1610 NHDYFLESNQNNVVILG 1626
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+T+ + I+++ G+SGND + G + N+V + SGND +G +G DT + ++ I
Sbjct: 2873 NLTVNGTSSIDTLYGASGNDTITGLAGNDVLYGQSGNDTLNGGTGNDTMYGGKGDDIFVI 2932
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ--VIG 376
I+ + NE S + + ++ A L+ I
Sbjct: 2933 -DSSTDIVNENVNEGIDTVQSSITYSLGNNVENLTLTGTTAINGTGNALNNTLLGNSAIN 2991
Query: 377 QDVFESMKHFYEFGLSEGR 395
+ + + G +
Sbjct: 2992 TLTDGAGDDYLDGGAGNDK 3010
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 16/153 (10%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------------DLTLIGGVKN 241
AP S + Y I+ +GGDD++ D
Sbjct: 962 APPTSADSTRYG-NDLIFGGKGEYQIWSNGGDDIIFGGTDKDYIDGGEGNDYLYGDNEDQ 1020
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
ID++ + + G + + + + + G ND++ G + +++ GND+ G
Sbjct: 1021 LIDIDGKEKDDVFGGKGDDFLFGGAGNDQLYGGKDNDILYGGANDDLIKGEDGNDIIYGG 1080
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G D F + N I D+ +
Sbjct: 1081 DGNDIFLFGGEGNDILYGEDANDKIHGDSGDDI 1113
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 59/186 (31%), Gaps = 30/186 (16%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+YG + L + K + ++ G+D L GG N I +
Sbjct: 1012 YLYGDNEDQLIDIDGKEKDDVFGGKGDDFLFGGAGNDQL----YGGKDNDILYGGANDDL 1067
Query: 253 IGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + N I + + G GND++ G AN+ SG+D+ G +G D
Sbjct: 1068 IKGEDGNDIIYGGDGNDIFLFGGEGNDILYGEDANDKIHGDSGDDIIFGGTGNDNLQGGQ 1127
Query: 312 PSYLYKIYRFE-------------------------NAIIVYDANEHKQDFLSDVERLRF 346
S LY + N+ + D + ++
Sbjct: 1128 GSDLYVFSIGDGTDTIVEEVSDIASLNYQNFIYFTFNSDQIRGVIRDGYDLIIKYDQYNQ 1187
Query: 347 ADQCID 352
DQ I
Sbjct: 1188 DDQVIV 1193
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 6/136 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L N + L T + I G + + I ++ ++ GND + G N+
Sbjct: 1612 DYFLESNQNNVVILGTGDF-HIVGNDLDNKIIGNSGNNTISAGDGNDTLQGGFGNDEING 1670
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-----SDVERLRF 346
+G+D G G D + + Y + ++ D++ + +L + +
Sbjct: 1671 GTGDDTLIGGLGNDVLYGGLGNDQYIFKDNDGDDVIVDSDGLNKIYLNHSLSNQISLHVI 1730
Query: 347 ADQCIDSVNVKQRSIL 362
+D + + +IL
Sbjct: 1731 SDGDLTITYGENSNIL 1746
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 27/157 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G LGN++Y ++ + G D + ++ ++G +N
Sbjct: 3013 GGLGNDVYVVDSTTDTITENT----NEGIDTVRSSVTY--------------TLGNNLEN 3054
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL---- 315
+T+ T I + G++ N+ +IGN+ N+ +GND+ DG G D F S
Sbjct: 3055 LTLTGTTAI-NATGNALNNTLIGNNEVNILNGGAGNDILDGQGGNDQFTGGTGSDTLIYQ 3113
Query: 316 ----YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ D + +++ F D
Sbjct: 3114 LLIASEATGGNGTDSWSDFTVGNVSTNMNADKIDFGD 3150
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 14/181 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIA 263
+ + IY GGDD + D L GG + +L+ + + + G + + +
Sbjct: 339 NIDIQGGDGNDHIYGGGGDDEIYGGEGDDYLEGGHGSD-ELHGGNDNDKLVGMDGDNYLY 397
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++G + D + G S N+ SG D+ DG +G D P++L N
Sbjct: 398 GDDGNDLLLGGADKDELYGGSGNDYLNGGSGADLLDGGTGNDILVGG-PNWLIAEGGEGN 456
Query: 324 AIIVYDANE----HKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
II D N+ + D LS + + ++ + + + Y+A+ +D+I
Sbjct: 457 DIIFADPNKVSNLERVDELSGGAGNDIFYGSIGPSNIKGAEGNDIIYSANGQDIITGGDG 516
Query: 378 D 378
+
Sbjct: 517 N 517
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 10/200 (5%)
Query: 206 IYKIEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
Y +PF+ I+ + L+LT I + D ++ G + I
Sbjct: 819 TYFFTENGVITPFLLPGINIFSDIASNTLNLTSIYSLLETDDGGALGADTVYGGLGDDFI 878
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++ G +D + G ++ + +G DV G +G D + K+
Sbjct: 879 LGSGSVDNLYGDENSDHLYGRGGDDYLYGGTGKDVVYGGAGRD--YISGGDDDDKLIGGY 936
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-- 380
A ++Y + + + + + + L + E I G D
Sbjct: 937 EADVIYGGEGNDNITGDLLNLFGTTAPPTSADSTRYGNDLIFGGKGEYQIWSNGGDDIIF 996
Query: 381 -ESMKHFYEFGLSEGRDITF 399
+ K + + G EG D +
Sbjct: 997 GGTDKDYIDGG--EGNDYLY 1014
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 76/253 (30%), Gaps = 61/253 (24%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKN-YID 244
Q Y S+ + I+ + + IY G+D +++ T+ GG N I
Sbjct: 2220 TQYNYTDSNDSISDLIHSSNISGYYNN--HYIYAKDGNDTIEIMEVTSTVYGGNGNDSIT 2277
Query: 245 LNTESWSSIGGYEKNMTIAQHTVI---ES-----------VVGSSGNDVV-------IGN 283
L + G E N IA + I E+ G GND + G
Sbjct: 2278 LKSG---DAYGGEGNDAIAINNGIAYGENGDDLIIIQAGDAYGGDGNDSITILTDASYGG 2334
Query: 284 SANNVF------FESSGNDVF---------DGSSGLDTFFYYAPSYLY-----KIYRFEN 323
N+V + G+D +G G D + + Y I + EN
Sbjct: 2335 DGNDVLMGSGQFYGGKGDDTLIANNDSAYMNGGEGADILQGGSGNDTYIVDELDILQLEN 2394
Query: 324 AIIVYDANEHKQDF---------LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
YD ++ D +E F+D + I +Y D
Sbjct: 2395 ETGGYDTIVYQYDVGNIDLANSQFEAIELFGFSDSYLLGNTANNSLIGNSGNNYLDGRTG 2454
Query: 375 IGQDVFESMKHFY 387
+ +Y
Sbjct: 2455 SDYMAGGAGDDYY 2467
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 10/130 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GND + G ++ + G+D +G G D + +N + D
Sbjct: 342 IQGGDGNDHIYGGGGDDEIYGGEGDDYLEGGHGSDELHGGNDNDKLVGMDGDNYLYGDDG 401
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
N+ E + + +L+ + L+ E G
Sbjct: 402 NDLLLGGADKDELYGGSGNDYLNGGSGA-DLLDGGTGNDILVGG-------PNWLIAEGG 453
Query: 391 LSEGRDITFD 400
EG DI F
Sbjct: 454 --EGNDIIFA 461
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 30/80 (37%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ ++GN+ANN +SGN+ DG +G D A Y + + I D N
Sbjct: 2425 GFSDSYLLGNTANNSLIGNSGNNYLDGRTGSDYMAGGAGDDYYVVDVTDTIITDEDGNTR 2484
Query: 334 KQDFLSDVERLRFADQCIDS 353
D E I+
Sbjct: 2485 IIDGDQVAEDFDAGTDTIEL 2504
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 11/160 (6%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN-------- 286
L GG N I + S+I G E N I + + G GND++ G S
Sbjct: 475 LSGGAGNDIFYGSIGPSNIKGAEGNDIIYSANGQDIITGGDGNDIIYGYSGEDTTESTIR 534
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER--- 343
N +GND+ GS D + + + + I+ + +++
Sbjct: 535 NNLSGGTGNDLIYGSVNSDFIEGGVGTNILEGKESVDNYIITENEGLGLGTQYIIDQDGR 594
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ + + Y+++ +I+ +G+ + +
Sbjct: 595 IQINLATLAVGTYDENIRAWYSSNNLYIIRKLGEGTDKEI 634
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 62/359 (17%), Positives = 111/359 (30%), Gaps = 64/359 (17%)
Query: 60 GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+ + +L + S H DI F + T Y YF N
Sbjct: 784 ATLADLTNLITNDASSHWDINFNFTKQWSEETQSY--TYFFTEN---------------- 825
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
G++ P G + ++ N + + S++ D +G
Sbjct: 826 -------------GVITPFLLPGINIFSDIASNTLNLTSIYSLLETDDGGALGADTVYGG 872
Query: 180 CATPMVSDIVAVQKIYGAPKGS----LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
+ +V +YG G + Y KD +Y G D +
Sbjct: 873 LGDDFILGSGSVDNLYGDENSDHLYGRGGDDYLYGGTGKD-----VVYGGAGRDYI---- 923
Query: 236 IGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSS-----------GNDVVIGN 283
G + L + I G E N I + ++ G++ GND++ G
Sbjct: 924 -SGGDDDDKLIGGYEADVIYGGEGNDNITGDLL--NLFGTTAPPTSADSTRYGNDLIFGG 980
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + G+D+ G + D + Y E+ +I D E F +
Sbjct: 981 KGEYQIWSNGGDDIIFGGTDKDYIDGGEGND-YLYGDNEDQLIDIDGKEKDDVFGGKGDD 1039
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF---ESMKHFYEFGLSEGRDITF 399
F D + + + + Y + +DLI+ + + FG EG DI +
Sbjct: 1040 FLFGGAGNDQLYGGKDNDILYGGANDDLIKGEDGNDIIYGGDGNDIFLFG-GEGNDILY 1097
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 13/159 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQ---TIYD-SGGDDLLDLTLIGGVKNYIDLNTES-WS 251
+ Y + TI++ D + I G +N ++++E +
Sbjct: 1959 TNFKDTMSTRYGFSESYSIAELEFSDGTIWNYKKIIDNISKVEIFGTENNDEIHSEDILN 2018
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--------GSSG 303
+I N I G G+D + G + N+ F SGND G G
Sbjct: 2019 TIYAKGGNDNIITGNKGSVTYGGDGDDNISGGTGKNIIFGDSGNDNIYNYGEGSLFGGDG 2078
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
D SYL ++ I D+N H ++D +
Sbjct: 2079 DDRLSGGDRSYLDGGNGYDIYNISEDSNVHGNYKITDAD 2117
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 5/108 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E N I ++ ++ GND +I + +V + G+D G +G + F +
Sbjct: 2002 IFGTENNDEIHSEDILNTIYAKGGNDNIITGNKGSVTYGGDGDDNISGGTGKNIIFGDSG 2061
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ IY + + D LS +R +
Sbjct: 2062 NDN--IYNYGEGSLF---GGDGDDRLSGGDRSYLDGGNGYDIYNISED 2104
Score = 45.5 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+S+ G N ++ T + + G++GN+ + G ++ D+ G G D +
Sbjct: 690 TSVNGASGNDYLSGTTGNDIIDGANGNNFINGLDGDDTLKGGDNQDIILGGVGKDKIYGG 749
Query: 311 APSYL 315
L
Sbjct: 750 DGEDL 754
Score = 40.9 bits (94), Expect = 0.78, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
N++ GND G G DT+ + + KIY F + D K L+
Sbjct: 1850 GNDIIIGGKGNDSLFGGRGNDTYIFNRGDGVDKIYDFYTYLDNSDEMNAKVTELNW 1905
Score = 40.5 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 22/135 (16%)
Query: 200 GSLGNNIYKIEVQQK---DSPFIQTIYDSG--------GDDLLDLTLIG-GVKNYIDLNT 247
G G++ Y ++V D I D G D ++L + + N
Sbjct: 2460 GGAGDDYYVVDVTDTIITDEDGNTRIIDGDQVAEDFDAGTDTIELWQDARFIGQDENGNP 2519
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ E N IE++V GN +N+ ++ ++ DG G DT+
Sbjct: 2520 VLTNNYRLLEDN--------IENLVLKGSAKTAFGNGLDNIITSNAQDNYIDGLGGDDTY 2571
Query: 308 FY--YAPSYLYKIYR 320
Y + Y Y
Sbjct: 2572 IYTKGGGTDTYSFYD 2586
>gi|257062161|ref|YP_003140049.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8802]
gi|256592327|gb|ACV03214.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8802]
Length = 1269
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 76/411 (18%), Positives = 138/411 (33%), Gaps = 69/411 (16%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-----SIHSDIKFISSNNGYVC 90
+ + + E++ + R L ++++ F E S ++F+ SNN
Sbjct: 114 SYYGSETGVREVSQAVKTNVRSILNSLESIINVDFVEVVETNTSTIGQMRFMVSNNPGYA 173
Query: 91 T---------PRYDSRYFMEINFDK-ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ ++D+ D + GT +HEIGHA+GL H
Sbjct: 174 YAYYPYSNSVQSTAGDIHLNGSYDRLGDTNGFQNAPGTHGYMTLIHEIGHAMGLKHSFEA 233
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
P D+ +VM Y + + +T M DI A+Q +YGA
Sbjct: 234 TALDP--------ALDNNNYTVMGY-----NFLYGDVSTASTFMPLDIAALQSLYGAKAT 280
Query: 201 SLGNNIYKIE------------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLN 246
+ N+ Y+ + QTI D+GG D LD + + IDLN
Sbjct: 281 NTTNDTYRFTNRIDQFTINGQPSVTSSNNIKQTIVDTGGIDTLDFSQLVSYSAGYRIDLN 340
Query: 247 ------------TESWS----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++S + ++ TVIE+VV SS D + NS+ N+
Sbjct: 341 GSGSITKQDAYLNTNYSVNGVTYKSTSSGTFLSYDTVIENVVNSSSKDSIYLNSSANIIS 400
Query: 291 ESS-----GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL------S 339
S NDV ++ D + + N ++ +
Sbjct: 401 GYSSTKATSNDVIYNATSQDLLKLDYNAAQITSTQSGNDRLLRLGTNGSITLKNYYLNTA 460
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ ++ + D S++ Q +G + +++ +Y
Sbjct: 461 NQIQISYLDSVNVSISDAQILEGNSGIQNLVFTVSLGSAINQNLTLYYSTA 511
>gi|89070671|ref|ZP_01157944.1| possible secreted protease [Oceanicola granulosus HTCC2516]
gi|89043751|gb|EAR49954.1| possible secreted protease [Oceanicola granulosus HTCC2516]
Length = 1409
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 78/392 (19%), Positives = 133/392 (33%), Gaps = 48/392 (12%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSNNGYVCTPR 93
+ ++ ++ V DL FE +D+ + + + + +
Sbjct: 559 PYYFEAYATLGFTDYQVDLIEGLFSSIETVADLRFEPVDDLRAADLLMVRNADVDAGSEQ 618
Query: 94 YDSRYFM------------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
++ + + D W + G + L I L L HP N
Sbjct: 619 TETVFQPLAEGRGLIMDRGDFQPSAEDPW---MEPGAWGHVDLLVSILTGLRLDHPHENN 675
Query: 142 -------GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS----------FGYCATPM 184
G + Y D + + + MS S DA+ +GY A PM
Sbjct: 676 ILQGLEPGPFGYYDELGDADLAQGIYTAMSLNRGLQSYPDATLGSDLPSYSYYGYEAGPM 735
Query: 185 VSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
DI A+Q YGA L +++Y + Q +I+D+GG D + G +
Sbjct: 736 ALDIAALQHKYGANTTARLEDDVYVLPDQNAVGTTWTSIWDAGGIDAI--AYEGASDAVV 793
Query: 244 DLNTESW----------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
DL + S++ G TIA T+IE+ SG+D V GN+A+N+F
Sbjct: 794 DLRAATLDYEHGGGGYLSAVEGIAGGYTIAAGTIIENASLGSGDDRVTGNAADNIFSGGD 853
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D G G DT A + ++ + D + L + L
Sbjct: 854 GDDSLRGELGNDTIDGGAGDDVLDGGDGDDVLSGGDGEDVLTGGL-GSDTLEGGAGDDSL 912
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
L+ + L+ G+D+
Sbjct: 913 FGGLGEDRLDGGDGIDSLVGGAGRDILAGGAD 944
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 8/140 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + +A T + + G +G D + G + ++ + D G +G D+ F +
Sbjct: 1110 LEGGVGDDVLAGGTGADILDGGAGRDRLAGGAGDDRLSGGAAADRLSGGAGGDSLFGGSG 1169
Query: 313 SYLYKIYRFENAI-----IVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEY 364
+ +A+ D L S + LR D + K
Sbjct: 1170 TDRLDGGDGRDALRGGQEADVLYGGEADDRLWGGSGDDSLRGGDGDDEIRGGKGDDRFHG 1229
Query: 365 TASYEDLIQVIGQDVFESMK 384
+ + L+ G D
Sbjct: 1230 GSGDDRLVGGEGDDRVRGGA 1249
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + + + G G+D++ G ++ G D+ G SG D A +
Sbjct: 1274 GGKGDDRLRGGNAEDVLKGGDGDDLLHGGRGDDRLRGGDGEDLLRGGSGTDDLVGGADAD 1333
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ + + A DA+ +DF ++ + A +
Sbjct: 1334 SFILKLGDGASHWRDADR-IRDFEDGIDLIGLAGE 1367
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 10/129 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + ++ + + G G+DV+ G + ++ +G D G +G D A
Sbjct: 1091 SLAGGIGDDRLSGGDEDDVLEGGVGDDVLAGGTGADILDGGAGRDRLAGGAGDDRLSGGA 1150
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ +++ D L D ++ +L + + L
Sbjct: 1151 AADRLSGGAGGDSL----FGGSGTDRLDG------GDGRDALRGGQEADVLYGGEADDRL 1200
Query: 372 IQVIGQDVF 380
G D
Sbjct: 1201 WGGSGDDSL 1209
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 5/117 (4%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ G D L D L GG S+ G + +
Sbjct: 1121 GGTGADILDGGAGRDRLAGGAGDDRLSGGAAADRLSGGAGGDSLFGGSGTDRLDGGDGRD 1180
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ G DV+ G A++ + SG+D G G D + ++ ++
Sbjct: 1181 ALRGGQEADVLYGGEADDRLWGGSGDDSLRGGDGDDEIRGGKGDDRFHGGSGDDRLV 1237
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 43/132 (32%), Gaps = 2/132 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + G + DV+ G +++ G+D G G D +
Sbjct: 1263 LKGRNGDDLLLGGKGDDRLRGGNAEDVLKGGDGDDLLHGGRGDDRLRGGDGEDLLRGGSG 1322
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + +A D +R+R + ID + + + +
Sbjct: 1323 TD--DLVGGADADSFILKLGDGASHWRDADRIRDFEDGIDLIGLAGELTYNDLSIHARRG 1380
Query: 373 QVIGQDVFESMK 384
+ +D E +
Sbjct: 1381 AAVVRDDGEILA 1392
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 45/169 (26%), Gaps = 9/169 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L GG I + G + ++ + + G +G D + G S +
Sbjct: 1116 DDVLAGGTGADILDGGAGRDRLAGGAGDDRLSGGAAADRLSGGAGGDSLFGGSGTDRLDG 1175
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFAD 348
G D G D + + + D + +R
Sbjct: 1176 GDGRDALRGGQEADVLYGGEADDRL----WGGSGDDSLRGGDGDDEIRGGKGDDRFHGGS 1231
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGR 395
V + + A + +I G+D + G + R
Sbjct: 1232 GDDRLVGGEGDDRVRGGAGDDTMIGRNGEDRLKGRNGDDLLLGGKGDDR 1280
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 1/128 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + + +VG G+D V G + ++ +G D G +G D
Sbjct: 1218 IRGGKGDDRFHGGSGDDRLVGGEGDDRVRGGAGDDTMIGRNGEDRLKGRNGDDLLLGGKG 1277
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ E+ + D ++ D +RLR D L A + I
Sbjct: 1278 DDRLRGGNAEDVLKGGDGDDLLHGGRGD-DRLRGGDGEDLLRGGSGTDDLVGGADADSFI 1336
Query: 373 QVIGQDVF 380
+G
Sbjct: 1337 LKLGDGAS 1344
Score = 44.7 bits (104), Expect = 0.055, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 11/186 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ +NI D + G+D +D V + + + G +
Sbjct: 841 TGNAADNI--FSGGDGDDSLRGEL----GNDTIDGGAGDDVLDG----GDGDDVLSGGDG 890
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ +++ G +G+D + G + G D G +G D A +
Sbjct: 891 EDVLTGGLGSDTLEGGAGDDSLFGGLGEDRLDGGDGIDSLVGGAGRDILAGGADADSLTG 950
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ + ++ S + L D + +L + L +G D
Sbjct: 951 GLDDDLLDGGGGDDTLNGG-SGRDSLSGGDGDDVLDGGAEDDVLSGGEGEDVLTGGLGSD 1009
Query: 379 VFESMK 384
E
Sbjct: 1010 ALEGGA 1015
>gi|218249074|ref|YP_002374445.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8801]
gi|218169552|gb|ACK68289.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8801]
Length = 1269
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 76/411 (18%), Positives = 138/411 (33%), Gaps = 69/411 (16%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-----SIHSDIKFISSNNGYVC 90
+ + + E++ + R L ++++ F E S ++F+ SNN
Sbjct: 114 SYYGSETGVREVSQAVKTNVRSILNSLESIINVDFVEVVETNTSTIGQMRFMVSNNPGYA 173
Query: 91 T---------PRYDSRYFMEINFDK-ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ ++D+ D + GT +HEIGHA+GL H
Sbjct: 174 YAYYPYSNSVQSTAGDIHLNGSYDRLGDTNGFQNAPGTHGYMTLIHEIGHAMGLKHSFEA 233
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
P D+ +VM Y + + +T M DI A+Q +YGA
Sbjct: 234 TALDP--------ALDNNNYTVMGY-----NFLYGDVSTASTFMPLDIAALQSLYGAKAT 280
Query: 201 SLGNNIYKIE------------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLN 246
+ N+ Y+ + QTI D+GG D LD + + IDLN
Sbjct: 281 NTTNDTYRFTNRIDQFTINGQPSVTSSNNIKQTIVDTGGIDTLDFSQLVSYSAGYRIDLN 340
Query: 247 ------------TESWS----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++S + ++ TVIE+VV SS D + NS+ N+
Sbjct: 341 GSGSITKQDAYLNTNYSVNGVTYKSTSSGTFLSYDTVIENVVNSSSKDSIYLNSSANIIS 400
Query: 291 ESS-----GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL------S 339
S NDV ++ D + + N ++ +
Sbjct: 401 GYSSTKATSNDVIYNATSQDLLKLDYNAAQITSTQSGNDRLLRLGTNGSITLKNYYLNTA 460
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ ++ + D S++ Q +G + +++ +Y
Sbjct: 461 NQIQISYLDSVNVSISDAQILEGNSGIQNLVFTVSLGSAINQNLTLYYSTA 511
>gi|148242008|ref|YP_001227165.1| hypothetical protein SynRCC307_0909 [Synechococcus sp. RCC307]
gi|147850318|emb|CAK27812.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 691
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 87/385 (22%), Positives = 135/385 (35%), Gaps = 60/385 (15%)
Query: 56 RWALGEWSKVVDLTFEETSI--HSDIKF--ISSNNGYV--------CTPRYDSRYFMEIN 103
R L ++DL F+E + SDI + S++G+ + S Y+
Sbjct: 166 RSILARLDALIDLDFKEKADWDGSDIDIYCLYSHSGWDEDTVGSVENHGKGLSAYWDLYW 225
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
D + V + +HEIGH LGL HP D +VM
Sbjct: 226 MDNSLVDSGSTKFTNYEKNTIVHEIGHVLGLSHPQERPYSKKWNDRD----------TVM 275
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG----------SLGNNIYKIEVQQ 213
SY + + + SDI A+Q+I+G ++ N ++
Sbjct: 276 SYNKGGAT-------WNSWFTHSDIKALQRIWGKENDHKDQLHQGKINIANKLFGENGND 328
Query: 214 KDSPFIQTIYDSGG--DDLL------DLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQ 264
K ++ SGG +D++ D + G N I+LNT W + G G ++ ++I
Sbjct: 329 KLFGGKKSDTLSGGMGNDIINGGSGRDTAVFSGRSNRINLNTTKWQNTGDGRDRLISI-- 386
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
E+V GNDVV GN A N +GND G G DT + +N
Sbjct: 387 ----ENVNVGGGNDVVTGNKAANTLNGQNGNDSLYGQLGNDTINGGSGRDTAVFSGLKNR 442
Query: 325 IIVYDANE----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV- 379
I + +D L +E + K + L + L G D
Sbjct: 443 INLNTTRWQNTGDGRDRLISIENVNAGGGNDVVTGNKAANTLNGQNGNDVLYGAAGNDRL 502
Query: 380 FESMKHFYEFGLSEGRDITFDSYLY 404
G + GRD + Y
Sbjct: 503 LGGRGDDRLHG-NSGRDYLYGDSGY 526
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 34/162 (20%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
G GN K ++Y G+D + D + G+KN I+LNT
Sbjct: 393 GGNDVVTGN---KAANTLNGQNGNDSLYGQLGNDTINGGSGRDTAVFSGLKNRINLNTTR 449
Query: 250 WSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE----------------- 291
W + G G ++ ++I E+V GNDVV GN A N
Sbjct: 450 WQNTGDGRDRLISI------ENVNAGGGNDVVTGNKAANTLNGQNGNDVLYGAAGNDRLL 503
Query: 292 -SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D G+SG D + + Y + + D N+
Sbjct: 504 GGRGDDRLHGNSGRDYLYGDSGYDQLYGYSGNDILKGGDGND 545
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 14/132 (10%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+YG + +Y G+DLL GG Y+ +
Sbjct: 519 YLYGDSGY---DQLYGYSGNDILKG-------GDGNDLL----YGGTGFYMKERGTGNDN 564
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + G SG+D + G+ N+ G D G +G DTF
Sbjct: 565 LFGQGGDDWLYGSDGSDELFGGSGDDHLYGDLGNDKLVGGQGKDKLWGQAGRDTFVLTKG 624
Query: 313 SYLYKIYRFENA 324
+I F++
Sbjct: 625 VGHDRIMDFKDG 636
>gi|188581753|ref|YP_001925198.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
gi|179345251|gb|ACB80663.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
Length = 361
Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats.
Identities = 66/312 (21%), Positives = 117/312 (37%), Gaps = 42/312 (13%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY + TIY G+D + L GG + + + + G
Sbjct: 65 DTIYGGNGFDQIIGEAGNDTIYGQDGNDYAAGNPGEDVLYGGQGDDFLVGEQGLDLVFGE 124
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N +A +SV G +G+D+V G+ N+ + +GND G G D + +
Sbjct: 125 DGNDFVAGGEDDDSVHGGNGDDLVDGDLGNDTLYGDAGNDTLFGDFGNDQMWGGTGTNTL 184
Query: 317 K----------------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR- 359
+ + + D + + E F+D+ I +
Sbjct: 185 DGAAGLDTAVFDFSFAQAGVTSSGTLSVITGANSVDTVKNTEAFAFSDRTILQADGNAAV 244
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
L Y + Y D+ Q + ++ +HF ++G EGR+ FD+ YL + +
Sbjct: 245 DDLFYLSQYRDVYQ----NGNDAEQHFRDYGWKEGRNPNAFFDTKGYLAA----YADVAA 296
Query: 418 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+HY+T+G KEGR+P F Y+A++ D+ + H+ +G
Sbjct: 297 AGIDPLQHYLTYGWKEGRDPSTQFDTKAYLAAYGDVAAEGINP-------LLHYLQYGAV 349
Query: 477 EGRFVTFDSYLY 488
EGR D
Sbjct: 350 EGRTTFNDGTFA 361
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 65/359 (18%), Positives = 123/359 (34%), Gaps = 36/359 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++G N + + ++ I G + + TI ++ + G GND + G + +
Sbjct: 19 DDIILGLSGNDVITDPGGFNRIDGQDGDDTITGGVDLDYIAGGPGNDTIYGGNGFDQIIG 78
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVER--- 343
+GND G G D + + ++ + E DF++ E
Sbjct: 79 EAGNDTIYGQDGNDYAAGNPGEDVLYGGQGDDFLVGEQGLDLVFGEDGNDFVAGGEDDDS 138
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-ITFD-- 400
+ + L A + L G D + G D FD
Sbjct: 139 VHGGNGDDLVDGDLGNDTLYGDAGNDTLFGDFGNDQMWGGTGTNTLDGAAGLDTAVFDFS 198
Query: 401 -SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP------DAFKALEYIASHEDLI 453
+ + S L + G++ ++ R A L Y++ + D+
Sbjct: 199 FAQAGVTSSGTLSVITGANSVDTVKNTEAF-AFSDRTILQADGNAAVDDLFYLSQYRDVY 257
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
D + HF ++G +EGR +++ Y + +HY+T+
Sbjct: 258 QNGND-------AEQHFRDYGWKEGR--NPNAFFDTKGYLAAYADVAAAGIDPLQHYLTY 308
Query: 514 GVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
G KEGR+P F Y+A++ D+ + H+ +G EGR+ +
Sbjct: 309 GWKEGRDPSTQFDTKAYLAAYGDVAAEGINP-------LLHYLQYGAVEGRTTFNDGTF 360
Score = 95.6 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 70/369 (18%), Positives = 120/369 (32%), Gaps = 33/369 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I + + + G + + G ++ D G G DT +
Sbjct: 13 LTGTLDDDIILGLSGNDVITDPGGFNRIDGQDGDDTITGGVDLDYIAGGPGNDTIYGGNG 72
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ I D N++ + E + + Q D + +Q L + D +
Sbjct: 73 FDQIIGEAGNDTIYGQDGNDYAAG--NPGEDVLYGGQGDDFLVGEQGLDLVFGEDGNDFV 130
Query: 373 QVIGQDVF--ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
D G D+ D+ D L FG+D+ T
Sbjct: 131 AGGEDDDSVHGGNGDDLVDG-----DLGNDTLYGDAGNDTLFGDFGNDQMWGGTGTNTLD 185
Query: 431 VKEGRNPDAFKALEYIASHED------LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
G + F A + A + + D
Sbjct: 186 GAAGLDTAVFDFSFAQAGVTSSGTLSVITGANSVDTVKNTEAFAFSDRTILQADGNAAVD 245
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 543
YL Y D+ + A +H+ +G KEGRNP+A F Y+A++ D+ A D
Sbjct: 246 DLFYLSQYRDVYQ----NGNDAEQHFRDYGWKEGRNPNAFFDTKGYLAAYADVAAAGIDP 301
Query: 544 PDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
H+ +G++EGR + F+ YL +Y D+ ++ HY+ +G E
Sbjct: 302 -------LQHYLTYGWKEGRDPSTQFDTKAYLAAYGDVA----AEGINPLLHYLQYGAVE 350
Query: 602 GRALGISGM 610
GR G
Sbjct: 351 GRTTFNDGT 359
>gi|163851992|ref|YP_001640035.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|240139119|ref|YP_002963594.1| hypothetical protein MexAM1_META1p2539 [Methylobacterium extorquens
AM1]
gi|163663597|gb|ABY30964.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|240009091|gb|ACS40317.1| hypothetical protein MexAM1_META1p2539 [Methylobacterium extorquens
AM1]
Length = 361
Score = 136 bits (341), Expect = 2e-29, Method: Composition-based stats.
Identities = 77/312 (24%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 204 NNIYKIEVQQKDSP--FIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY + TIY GDD D L GG N + + + G
Sbjct: 65 DTIYGGNGSDQLIGEIGNDTIYGQDGDDYAAGNPGDDVLYGGRGNDFFVGEQGADLVFGE 124
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N +A ++V G GND+V G+ N+V F +GNDV G G D +
Sbjct: 125 EGNDFVAGGEDDDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLFGDYGNDRMSGGTGTNTL 184
Query: 317 K----------------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR- 359
+ A ++ D + + E FAD+ I + Q
Sbjct: 185 DGALGIDTAVFNFNFAQAGVTSAGTLSSIAGQNSLDTVKNTEVFAFADRSILQGDGNQAV 244
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
L Y + Y D+ ++ ++ +HF ++G EGR+ FD+ YL + +
Sbjct: 245 DDLFYLSRYGDVY----RNGNDAEQHFSDYGWKEGRNPNAFFDTKGYLAA----YADVAA 296
Query: 418 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
HY+T+G KEGR+P A F +Y+A++ D+ A + H+ +G
Sbjct: 297 AGINPLEHYLTYGWKEGRDPSAQFDTKQYLAANGDVAAAGLNP-------LLHYLEYGAV 349
Query: 477 EGRFVTFDSYLY 488
EGR D
Sbjct: 350 EGRATFNDGTFA 361
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 82/406 (20%), Positives = 136/406 (33%), Gaps = 65/406 (16%)
Query: 221 TIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI + GD++L+ TL +G + N + + ++ I G + N TI ++ + G
Sbjct: 3 TISGTNGDNVLNGTLQDDVILGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAGGP 62
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--- 332
GND + G + ++ GND G G D + R + + +
Sbjct: 63 GNDTIYGGNGSDQLIGEIGNDTIYGQDGDDYAAGNPGDDVLYGGRGNDFFVGEQGADLVF 122
Query: 333 --HKQDFLSDVER---LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
DF++ E + D +L A + L G D
Sbjct: 123 GEEGNDFVAGGEDDDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLFGDYGNDRMSGGT--- 179
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G + L G D ++ GV + +
Sbjct: 180 ------GTNT-------------LDGALGIDTAVFNFNFAQAGVTSAGTLSSIAGQNSLD 220
Query: 448 S-HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ + AFAD L G D YL Y D+ + A
Sbjct: 221 TVKNTEVFAFADRSILQGDGNQ-------------AVDDLFYLSRYGDVYR----NGNDA 263
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+H+ +G KEGRNP+AF + + + A P +H+ +G++EGR +
Sbjct: 264 EQHFSDYGWKEGRNPNAFFDTKGYLAAYADVAAAGINP------LEHYLTYGWKEGRDPS 317
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
F+ YL + D+ HY+ +G EGRA G
Sbjct: 318 AQFDTKQYLAANGDVAAA----GLNPLLHYLEYGAVEGRATFNDGT 359
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 70/371 (18%), Positives = 114/371 (30%), Gaps = 65/371 (17%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N I + G GND + G + + GND G +G D
Sbjct: 22 ILGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAGGPGNDTIYGGNGSDQLIGEIG 81
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + Y A D L F + V ++ A ED
Sbjct: 82 ND----TIYGQDGDDYAAGNPGDDVLYGGRGNDFFVGEQGADLVFGEEGNDFVAGGEDDD 137
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
V G D + + G D+ F D L +G+DR +
Sbjct: 138 TVYGGDGNDLVDGDL------GNDVLFGD----AGNDVLFGDYGNDRMSG---------- 177
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
G + A + F + + + +
Sbjct: 178 -GTGTNTLDG------------ALGIDTAVFN--------FNFAQAGVTSAGTLSSIAGQ 216
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ L V ++ A A I G A L Y++ + D+ D +
Sbjct: 217 NSLDTVKNTEVFAFADRSILQGDG----NQAVDDLFYLSRYGDVYRNGND-------AEQ 265
Query: 553 HFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
HFS++G++EGR+ F+ YL + + + +HY+T+G KEGR
Sbjct: 266 HFSDYGWKEGRNPNAFFDTKGYLAA----YADVAAAGINPLEHYLTYGWKEGRD---PSA 318
Query: 611 QFKSVMNLSEK 621
QF + L+
Sbjct: 319 QFDTKQYLAAN 329
>gi|218530744|ref|YP_002421560.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|254561713|ref|YP_003068808.1| hypothetical protein METDI3303 [Methylobacterium extorquens DM4]
gi|218523047|gb|ACK83632.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|254268991|emb|CAX24952.1| hypothetical protein METDI3303 [Methylobacterium extorquens DM4]
Length = 361
Score = 136 bits (341), Expect = 2e-29, Method: Composition-based stats.
Identities = 77/312 (24%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 204 NNIYKIEVQQKDSP--FIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY + TIY GDD D L GG N + + + G
Sbjct: 65 DTIYGGNGSDQLIGEIGNDTIYGQDGDDYAAGNPGDDVLYGGRGNDFFVGEQGADLVFGE 124
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N +A ++V G GND+V G+ N+V F +GNDV G G D +
Sbjct: 125 EGNDFVAGGEDDDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLFGDYGNDRMSGGTGTNTL 184
Query: 317 K----------------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR- 359
+ A ++ D + + E FAD+ I + Q
Sbjct: 185 DGALGIDTAVFNFNFAQAGVTSAGTLSSIAGQNSLDTVKNTEVFAFADRSILQGDGNQAV 244
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
L Y + Y D+ ++ ++ +HF ++G EGR+ FD+ YL + +
Sbjct: 245 DDLFYLSQYGDVY----RNGNDAEQHFSDYGWKEGRNPNAFFDTKGYLAA----YADVAA 296
Query: 418 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
HY+T+G KEGR+P A F +Y+A++ D+ A + H+ +G
Sbjct: 297 AGINPLEHYLTYGWKEGRDPSAQFDTKQYLAANGDVAAAGLNP-------LLHYLEYGAV 349
Query: 477 EGRFVTFDSYLY 488
EGR D
Sbjct: 350 EGRATFNDGTFA 361
Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats.
Identities = 82/406 (20%), Positives = 136/406 (33%), Gaps = 65/406 (16%)
Query: 221 TIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI + GD++L+ TL +G + N + + ++ I G + N TI ++ + G
Sbjct: 3 TISGTNGDNVLNGTLQDDVILGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAGGP 62
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--- 332
GND + G + ++ GND G G D + R + + +
Sbjct: 63 GNDTIYGGNGSDQLIGEIGNDTIYGQDGDDYAAGNPGDDVLYGGRGNDFFVGEQGADLVF 122
Query: 333 --HKQDFLSDVER---LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
DF++ E + D +L A + L G D
Sbjct: 123 GEEGNDFVAGGEDDDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLFGDYGNDRMSGGT--- 179
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G + L G D ++ GV + +
Sbjct: 180 ------GTNT-------------LDGALGIDTAVFNFNFAQAGVTSAGTLSSIAGQNSLD 220
Query: 448 S-HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ + AFAD L G D YL Y D+ + A
Sbjct: 221 TVKNTEVFAFADRSILQGDGNQ-------------AVDDLFYLSQYGDVYR----NGNDA 263
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+H+ +G KEGRNP+AF + + + A P +H+ +G++EGR +
Sbjct: 264 EQHFSDYGWKEGRNPNAFFDTKGYLAAYADVAAAGINP------LEHYLTYGWKEGRDPS 317
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
F+ YL + D+ HY+ +G EGRA G
Sbjct: 318 AQFDTKQYLAANGDVAAA----GLNPLLHYLEYGAVEGRATFNDGT 359
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 70/371 (18%), Positives = 114/371 (30%), Gaps = 65/371 (17%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N I + G GND + G + + GND G +G D
Sbjct: 22 ILGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAGGPGNDTIYGGNGSDQLIGEIG 81
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + Y A D L F + V ++ A ED
Sbjct: 82 ND----TIYGQDGDDYAAGNPGDDVLYGGRGNDFFVGEQGADLVFGEEGNDFVAGGEDDD 137
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
V G D + + G D+ F D L +G+DR +
Sbjct: 138 TVYGGDGNDLVDGDL------GNDVLFGD----AGNDVLFGDYGNDRMSG---------- 177
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
G + A + F + + + +
Sbjct: 178 -GTGTNTLDG------------ALGIDTAVFN--------FNFAQAGVTSAGTLSSIAGQ 216
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ L V ++ A A I G A L Y++ + D+ D +
Sbjct: 217 NSLDTVKNTEVFAFADRSILQGDG----NQAVDDLFYLSQYGDVYRNGND-------AEQ 265
Query: 553 HFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
HFS++G++EGR+ F+ YL + + + +HY+T+G KEGR
Sbjct: 266 HFSDYGWKEGRNPNAFFDTKGYLAA----YADVAAAGINPLEHYLTYGWKEGRD---PSA 318
Query: 611 QFKSVMNLSEK 621
QF + L+
Sbjct: 319 QFDTKQYLAAN 329
>gi|238623419|emb|CAS06704.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 197
Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 59/163 (36%), Gaps = 10/163 (6%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI--HSDIKFI 82
Y P V R ++ + +E A+ +L W+ V +TF E + D
Sbjct: 26 TYTFLTAPPVGYATRGLGTFSQFSSLQKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMT 85
Query: 83 SSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+N + P + +K G+G HEIGH LGL
Sbjct: 86 FANFSASNGGAAFAYLPSSSRKGESWYLINKDYAVNKIPGEGNYGRQTLTHEIGHTLGLS 145
Query: 136 HPGSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASF 177
HPG YN G D Y D+ SVMSY+ ++ +
Sbjct: 146 HPGDYNAGNGNPTYRDAVYGEDTRAYSVMSYWSESNTGQHFTN 188
>gi|307591965|ref|YP_003899556.1| peptidase M23 [Cyanothece sp. PCC 7822]
gi|306985610|gb|ADN17490.1| Peptidase M23 [Cyanothece sp. PCC 7822]
Length = 3503
Score = 134 bits (336), Expect = 6e-29, Method: Composition-based stats.
Identities = 72/391 (18%), Positives = 130/391 (33%), Gaps = 74/391 (18%)
Query: 9 TTERIADHLLRDQ------YWSNYFIRYKPD-----VLTTHRLSFDITELNPNAQEVARW 57
+ + D +LR + W N + Y + E++ + R
Sbjct: 1558 SGDYQIDGILRGEKEKWNFSWGNRKLTYSFYSHSVFNGDYSGGQTGVEEVSEGVKNNYRK 1617
Query: 58 ALGEWSKVVDLTFEETSIHSD----IKFISSNNGYVCT--PRYDSRYFMEINF------- 104
V+++ F E + + I+ + S++GY P D Y + +
Sbjct: 1618 IFNWLENVINIDFVEVTESPNNYGRIRIVPSSSGYASAFGPTEDELYTVASDIYLNQTFD 1677
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
D + G +HE+GHALG+ HP + + P E + ++M
Sbjct: 1678 RLGDGNGFQESAGYHGYAALIHELGHALGINHPNAKDVLIPP-------EELHYDHTLM- 1729
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI----- 219
T M D+ A+Q +YGA + + N Y+ +
Sbjct: 1730 -------GGYGGGVAPGTFMSYDLKALQYLYGAKQYNETNTTYQFSARTDKFSVNGQTFL 1782
Query: 220 -------QTIYDSGGDDLLDLTLIGGVKN--YIDLNTESW----SSIGGYEK-------- 258
Q ++DSGG D D + + + ++DL S
Sbjct: 1783 ESPYQLKQLLWDSGGLDTFDFSNLTPNTSGYHLDLTPGGILTPQSDYNAGTYTVNGVTYY 1842
Query: 259 ----NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-----SSGNDVFDGSSGLDTFFY 309
IA + +IE+V+ SS ND + NSA N F +GND++ + DT
Sbjct: 1843 TSNYGTVIAYNVLIENVINSSSNDEIFANSAANTFKGYSPTRQTGNDIYWNTDSNDTLDL 1902
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
A ++ ++ + +
Sbjct: 1903 SAYYSSDVTQTKNGNDLLLKLAQNGTITVKN 1933
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT-- 261
N++ + + ++ + GD+L +LTL G +L SS N
Sbjct: 3271 NDVITENLAEGTDSVNASVSFTLGDNLENLTLTGSS----NLTGTGNSSNNTLTGNTGAN 3326
Query: 262 -IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ +SV G +G+D + G NN +GNDVF+G +G D A S +
Sbjct: 3327 ILSAGGGNDSVNGGNGDDTLYGGEGNNTLVGGAGNDVFEGGNGDDRLTGGAGSDSFT--- 3383
Query: 321 FENAIIVYDANEHKQDFLSDVERL 344
+ + N L++ +R+
Sbjct: 3384 GGGGVNTFVINPLTDSLLANFDRI 3407
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 67/180 (37%), Gaps = 17/180 (9%)
Query: 218 FIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ------- 264
++ GG+D L D+ ++ + + I N+ + + T++
Sbjct: 3153 GNDSLDGKGGNDTLIGGLENDVYIVDSIDDVITENSAEGTDSVNASVSYTLSANLEKLTL 3212
Query: 265 -HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T +G+S ++ + GNS NN + GND DG +G DT + + +Y + +
Sbjct: 3213 TGTGNLEGIGNSLDNTLTGNSGNNTLKGNEGNDSLDGKAGSDTLVGGSGNDVYTVDHIND 3272
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-EYTASYEDLIQVIGQDVFES 382
++ + D ++ D + ++ +S L G ++ +
Sbjct: 3273 --VITENLAEGTDSVNASVSFTLGDNLENLTLTGSSNLTGTGNSSNNTLTGNTGANILSA 3330
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 62/355 (17%), Positives = 115/355 (32%), Gaps = 49/355 (13%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ I F ++NN T +E + + + + I + G
Sbjct: 2902 ATTGSITFAANNNQASLTLNPTGDTTVESHETVSITLLDNTAYIKGTTAAVIATINNDDG 2961
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFL-------TSVMSYFM----PQDSMMDASFGYCAT 182
+ GG +D ND+ + +V S ++ D Y +
Sbjct: 2962 DNNNNELIGGPGADNLDGQLGNDTMIGGDGNDTYTVDSSGDLIVENPNAGTDTVKTYLSY 3021
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIG 237
+ ++ + + + + GNN + + + DS G+D LD TLIG
Sbjct: 3022 ILGENLENLTLLGISNLNATGNN---LNNSLTGNNGNNILTDSQGNDTLDGKGGDDTLIG 3078
Query: 238 GVKNY------------------IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
GV N ID S S T + VG++ N+
Sbjct: 3079 GVGNDVYVVDSIHDVIIENTDEGIDSVNASVSYTLSANLEKLTLTGTGNINGVGNNLNNT 3138
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL- 338
+ GNS NN GND DG G DT + +Y + ++ ++ + + D +
Sbjct: 3139 LTGNSGNNTLIGYEGNDSLDGKGGNDTLIGGLENDVYIVDSIDD--VITENSAEGTDSVN 3196
Query: 339 --------SDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+++E+L ++ + + L + L G D +
Sbjct: 3197 ASVSYTLSANLEKLTLTGTGNLEGIGNSLDNTLTGNSGNNTLKGNEGNDSLDGKA 3251
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 56/411 (13%), Positives = 97/411 (23%), Gaps = 70/411 (17%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD- 67
T A++ + I L L+ + T +N + + +
Sbjct: 2696 TLSSSANYTVGTTSAVTGTIINDDVSLPNITLTVNPTSVNEDGTTTLIYTFTRTGSTANA 2755
Query: 68 --LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ F + +++G N A + TI ++ +
Sbjct: 2756 LSVNF-GVGGSATFNSDYTSSGAASFTSTSGTVTFAANSSTATLTIDPTSDTTIETNETV 2814
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
AL L +Y G V ND L ++ + T
Sbjct: 2815 -----ALTLSSSANYTVGT-TSAVTGTIINDDVLPTI-------------TLAVSPT--- 2852
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ N IY + + GG +
Sbjct: 2853 ----------SVNEDGTTNLIYTFTRTGSTEGALSVNFGVGGSATFNNDYTSSGAASFSA 2902
Query: 246 NTESWS-------------------------------SIGGYEKNMTIAQHTVIESVVGS 274
T S + Y K T A I + G
Sbjct: 2903 TTGSITFAANNNQASLTLNPTGDTTVESHETVSITLLDNTAYIKGTTAAVIATINNDDGD 2962
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ N+ +IG + GND G G DT+ + L I NA
Sbjct: 2963 NNNNELIGGPGADNLDGQLGNDTMIGGDGNDTYTVDSSGDL--IVENPNAGTDTVKTYLS 3020
Query: 335 QDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++E L +++ + L L G D +
Sbjct: 3021 YILGENLENLTLLGISNLNATGNNLNNSLTGNNGNNILTDSQGNDTLDGKG 3071
>gi|323138318|ref|ZP_08073389.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
gi|322396401|gb|EFX98931.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
Length = 754
Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/338 (20%), Positives = 106/338 (31%), Gaps = 95/338 (28%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFG 416
YT +Y D+ G+ + ++H+ G EGR+ F++ YL +Y D+
Sbjct: 24 FDTDYYTHAYPDV----GEAKIDPLQHYLTAGWREGRNPNLNFNTIWYLHAYQDVAR--- 76
Query: 417 SDRGAAARHYITHGVKEGRNPDA---------------F---KALEYIASHE-------- 450
Y+ G GR F A E+IA ++
Sbjct: 77 -QNQNPLVDYVNGGQASGRLSSPPVDESSWMTKAAENEFLPASAREFIACYDMIKKSVLF 135
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
D PD +HF G G FD YL SY+D+R +
Sbjct: 136 DETFYTTCYPDAQGDPLEHFIRNGWRLGYHPSPNFDMRKYLQSYEDVRASGQN----PLI 191
Query: 509 HYITHGVKEGRNPDA----------------------------------------FKALE 528
HY+ G +EGR + F A
Sbjct: 192 HYLKSGRREGRRIEPLPESETWKLHAGTRVHQGAPLYATLFEKQISATLLDESGLFDAEW 251
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSD 586
Y+ + D+ +A D + HF + G E RS F+ + Y Y+D+ +
Sbjct: 252 YLNRYPDVRSAGMDP-------RGHFISSGSAEFRSPGPGFDAEWYCRRYEDVL----DE 300
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
HY+ G EGR + LS+
Sbjct: 301 GYEPLVHYVKFGRAEGRDATPPTPDYTYTYALSDPGPI 338
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 19/118 (16%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGA 421
Y Y D+ + HF G +E R FD+ Y Y+D+ +
Sbjct: 252 YLNRYPDVRSA----GMDPRGHFISSGSAEFRSPGPGFDAEWYCRRYEDVL----DEGYE 303
Query: 422 AARHYITHGVKEGRN---PDAFKALEYIASH----EDLINAF--ADAPDLVQVGKDHF 470
HY+ G EGR+ P Y S D++ A + D H+
Sbjct: 304 PLVHYVKFGRAEGRDATPPTPDYTYTYALSDPGPIPDVVPARRPINDHDFALEVPFHY 361
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 13/99 (13%)
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNP 569
G + F Y ++ D+ A D H+ G+ EGR+ FN
Sbjct: 12 DFGKRSKSLKRCFDTDYYTHAYPDVGEAKIDP-------LQHYLTAGWREGRNPNLNFNT 64
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
YL +Y D+ + Y+ G GR
Sbjct: 65 IWYLHAYQDVARQNQNPLVD----YVNGGQASGRLSSPP 99
>gi|238623406|emb|CAS06697.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 186
Score = 131 bits (328), Expect = 5e-28, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 60/173 (34%), Gaps = 17/173 (9%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+ + H ++ ++ + + A A+ W+ V +TF E + D
Sbjct: 9 LTYTFLTSASQATMNKHGIT-GFSQFSNLQKGQAVLAMQSWADVAKVTFTEKASGGDFHM 67
Query: 82 ISSNN--------GYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALH 126
N + P + +Y + + G H
Sbjct: 68 TFGNYSGGQDGAAAFAYLPGTNDKYHTSGTDGTSWYLINNSYTANINPGLNNYGRQTLTH 127
Query: 127 EIGHALGLMHPGSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASFG 178
EIGH LGL HPG YN G D DY D+ SVMSY+ ++ + + G
Sbjct: 128 EIGHTLGLDHPGDYNAGTGNPSYRDADYGQDTRGYSVMSYWSEFNTNQNFTKG 180
>gi|86356373|ref|YP_468265.1| metallopeptidase protein [Rhizobium etli CFN 42]
gi|86280475|gb|ABC89538.1| probable metallopeptidase protein [Rhizobium etli CFN 42]
Length = 329
Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats.
Identities = 56/289 (19%), Positives = 96/289 (33%), Gaps = 54/289 (18%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS--------FDITELNPNAQEVARWAL- 59
T ++ D L W P +++ + + ++ Q +A + +
Sbjct: 14 TRDQKVDGLFSGTAWDGTITYAFPTTSSSYADGAELYYEKYYSFSPISSQQQSLALYFME 73
Query: 60 GEWSKVVDLTF-EETSIHSDIKFISSNNGYVCTPRYD-------SRYFMEINFDKADVWR 111
+ + F E +++ + S+N V + YF + D+W
Sbjct: 74 QSYGSAANDGFSVEGFTNANFEAGSANTATVRFAQTSDPLLDTAGAYFPATDGRGGDIWF 133
Query: 112 YG-----------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
G HE+GHALGL H P DS
Sbjct: 134 GTGYAGTEADYRFPRFGNYAGQTLAHELGHALGLKHAHEGGTVVPS-------AYDSLEY 186
Query: 161 SVMSYF----MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK- 214
++M+Y + G T M+ DI A+Q++YGA + G+ +Y+ Q
Sbjct: 187 TIMTYHTFIGDDESGAKYEQNGAPQTFMMLDIAALQEMYGADYTTNSGDTVYRWNPNQGI 246
Query: 215 ------------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ TI+D GG D DL+ IDL+ +S
Sbjct: 247 TYVNGVAAITPAANRVFATIWDGGGTDTYDLSAYT-TALKIDLHAGGYS 294
>gi|197103952|ref|YP_002129329.1| hypothetical protein PHZ_c0486 [Phenylobacterium zucineum HLK1]
gi|196477372|gb|ACG76900.1| hypothetical protein PHZ_c0486 [Phenylobacterium zucineum HLK1]
Length = 424
Score = 130 bits (326), Expect = 8e-28, Method: Composition-based stats.
Identities = 65/322 (20%), Positives = 102/322 (31%), Gaps = 49/322 (15%)
Query: 312 PSYLYKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVKQRSILE----YT 365
L ++ A+++ + L D+ + + V + L Y
Sbjct: 115 DRALVRLGSVGQALVIARSGTWRGTGRALHDLRHMAAYARRGGDPAVSPLTPLFDQAWYL 174
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A++ D+ G + H+ G +EGR FD Y + + A
Sbjct: 175 AAHPDV----GGGRAAPLVHYLTSGSAEGRSPHPLFDEAWYRREN---AHELAATGMTAL 227
Query: 424 RHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF-- 480
HY+ G GR+P F Y+A L A +H+ GC +G
Sbjct: 228 EHYVRRGAALGRSPHPAFDVAHYLAQGPALAPDEGPA--------EHYLREGCAQGLSPH 279
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD Y+ HY+T G + G P F Y+A + D+ A
Sbjct: 280 PLFDPAWYMHRAGSSAQGV-----PPLVHYLTEGWRSGVPPHPLFDPKWYLAQNPDVAEA 334
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
+ HF + G EGR S F+P YL + A Y+
Sbjct: 335 GLEP-------LAHFLSGGAAEGRSHSPWFDPAHYLAQ----RGEALAPGVAPVVDYLQG 383
Query: 598 GM---KEGRALGISGMQFKSVM 616
G E R G + +
Sbjct: 384 GAWQVSEARP-GFPSAAYLAAR 404
Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 82/262 (31%), Gaps = 41/262 (15%)
Query: 383 MKHFYEFGLSEG------RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
++H + G FD YL ++ D+ G R A HY+T G EGR+
Sbjct: 146 LRHMAAYARRGGDPAVSPLTPLFDQAWYLAAHPDV----GGGRAAPLVHYLTSGSAEGRS 201
Query: 437 PDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYD 493
P F Y + + A +H+ G GR FD YL
Sbjct: 202 PHPLFDEAWYRRENAHELAATG------MTALEHYVRRGAALGRSPHPAFDVAHYLAQGP 255
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
L G A HY+ G +G +P F Y+ P +
Sbjct: 256 ALAPDEG-----PAEHYLREGCAQGLSPHPLFDPAWYMHRAGSSAQ--GVPPLV------ 302
Query: 553 HFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG--IS 608
H+ G+ G F+P YL D+ H+++ G EGR+
Sbjct: 303 HYLTEGWRSGVPPHPLFDPKWYLAQNPDVAEA----GLEPLAHFLSGGAAEGRSHSPWFD 358
Query: 609 GMQFKSVMNLSEKSRDKADLSL 630
+ + + +
Sbjct: 359 PAHYLAQRGEALAPGVAPVVDY 380
>gi|254503057|ref|ZP_05115208.1| Cadherin domain protein [Labrenzia alexandrii DFL-11]
gi|222439128|gb|EEE45807.1| Cadherin domain protein [Labrenzia alexandrii DFL-11]
Length = 703
Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
+FDS YL D+ + +A +H+ G EGR+P+ F Y+ + D+ A
Sbjct: 8 SFDSDFYLSQNPDVAAAIEAGLFESAEQHFNQFGFSEGRDPNPYFDTSFYLEQNPDVAAA 67
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+ +HF+ FG EGR F+ YL D+ + H+I H
Sbjct: 68 GINP-------LNHFNQFGETEGRSPNAIFNPTYYLEQNPDVAASG----ISPFLHFINH 116
Query: 514 GVKEGRNPDA---------FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
G EGR+P+A F Y+A++ D+ +A A+ +G +H+ FG++E RS
Sbjct: 117 GASEGRSPNASVASQTSEGFDEAAYLAANPDIADAIANGT--FSSGYEHWLLFGFDESRS 174
Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 27/181 (14%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
+F + Y++ + D+ A L + + HF+ FG EGR FD+ YL D+
Sbjct: 7 SSFDSDFYLSQNPDVAAAIE--AGLFESAEQHFNQFGFSEGRDPNPYFDTSFYLEQNPDV 64
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
H+ G EGR+P+A F Y+ + D+ + HF
Sbjct: 65 AAAG----INPLNHFNQFGETEGRSPNAIFNPTYYLEQNPDVAASGISP-------FLHF 113
Query: 555 SNFGYEEGRSIT----------FNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGR 603
N G EGRS F+ YL + D+ + + S+ +H++ G E R
Sbjct: 114 INHGASEGRSPNASVASQTSEGFDEAAYLAANPDIADAIANGTFSSGYEHWLLFGFDESR 173
Query: 604 A 604
+
Sbjct: 174 S 174
Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 26/180 (14%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
Y + D+ I +FES +HF +FG SEGRD FD+ YL D+
Sbjct: 6 TSSFDSDFYLSQNPDVAAAIEAGLFESAEQHFNQFGFSEGRDPNPYFDTSFYLEQNPDVA 65
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
H+ G EGR+P+A F Y+ + D+ + HF
Sbjct: 66 AA----GINPLNHFNQFGETEGRSPNAIFNPTYYLEQNPDVAASGISP-------FLHFI 114
Query: 472 NFGCEEGRFV----------TFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRN 520
N G EGR FD YL + D+ + + + H++ G E R+
Sbjct: 115 NHGASEGRSPNASVASQTSEGFDEAAYLAANPDIADAIANGTFSSGYEHWLLFGFDESRS 174
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 37/127 (29%), Gaps = 15/127 (11%)
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F+ + + + ++ + + + Y D+
Sbjct: 52 FDTSFYLEQNPDVAAAGINPLNHFNQFGETEGRSPNAIFNPTYYLEQNPDVAA----SGI 107
Query: 381 ESMKHFYEFGLSEGRDIT----------FDSYLYLGSYDDLRNVFGSDR-GAAARHYITH 429
HF G SEGR FD YL + D+ + + + H++
Sbjct: 108 SPFLHFINHGASEGRSPNASVASQTSEGFDEAAYLAANPDIADAIANGTFSSGYEHWLLF 167
Query: 430 GVKEGRN 436
G E R+
Sbjct: 168 GFDESRS 174
Score = 37.4 bits (85), Expect = 8.6, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 10/126 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + D + + D + T I G I ++ + +A+
Sbjct: 548 GLSITGLDLSGAVSSWKLFNIDGVTETNIDGSSYGI-----TFPNTTD-----VVAEFQG 597
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+S + + ++ G S+++ GND +G G D A ++ I
Sbjct: 598 EKSANQGTVDTIITGTSSSDQLNGKEGNDTLNGGDGNDILIGLAGDDRIDGGDGIDSAIF 657
Query: 328 YDANEH 333
+E+
Sbjct: 658 SGGSEN 663
>gi|119489829|ref|ZP_01622584.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119454257|gb|EAW35408.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 299
Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 80/240 (33%), Gaps = 23/240 (9%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
Y+ + + A + G DHF G E FD Y Y D+
Sbjct: 8 LDEDFYLDQYPAVSEAV--DAGEFESGLDHFLQVGQFESLQPNPLFDPAYYRSIYTDVSA 65
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ A H+I G E RNP+ F Y+ + D+ AF +HF
Sbjct: 66 AIEREAITEAEHFILFGQFEQRNPNPLFDTAYYLEQYPDVETAFQAE---QLTPFEHFFR 122
Query: 557 FGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGRALGISGMQ-- 611
FG EGR+ + F+ Y ++ + +H+I G+K G+ +
Sbjct: 123 FGQFEGRNPSLFFDALFYQERNPEVITAIEDGVVNSLFEHFIRFGLKRGKLGVSPEPEND 182
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNY----------YDSDLYSMHDIN 661
V L + + VD+Y + D+DL + D+N
Sbjct: 183 LSGVFQLDTLLGSRTVIESVSTENPVDIYRFVIPNETSQVSIRLSELTADADLEILQDLN 242
Score = 124 bits (310), Expect = 6e-26, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S ++ Q Y + Y D+ I ++ +HF FG E R+
Sbjct: 31 SGLDHFLQVGQFESLQPNPLFDPAYYRSIYTDVSAAIEREAITEAEHFILFGQFEQRNPN 90
Query: 399 --FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD+ YL Y D+ F +++ H+ G EGRNP F AL Y + ++I A
Sbjct: 91 PLFDTAYYLEQYPDVETAFQAEQLTPFEHFFRFGQFEGRNPSLFFDALFYQERNPEVITA 150
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
D +V +HF FG + G+
Sbjct: 151 IEDG--VVNSLFEHFIRFGLKRGK 172
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 3/100 (3%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+++ E Q Y Y D+ + +HF+ FG EGR+
Sbjct: 72 ITEAEHFILFGQFEQRNPNPLFDTAYYLEQYPDVETAFQAEQLTPFEHFFRFGQFEGRNP 131
Query: 398 T--FDSYLYLGSYDDLRNVFGSDRGAAA-RHYITHGVKEG 434
+ FD+ Y ++ + H+I G+K G
Sbjct: 132 SLFFDALFYQERNPEVITAIEDGVVNSLFEHFIRFGLKRG 171
>gi|325981484|ref|YP_004293886.1| peptidase metallopeptidase [Nitrosomonas sp. AL212]
gi|325531003|gb|ADZ25724.1| peptidase metallopeptidase [Nitrosomonas sp. AL212]
Length = 588
Score = 127 bits (318), Expect = 8e-27, Method: Composition-based stats.
Identities = 82/359 (22%), Positives = 134/359 (37%), Gaps = 71/359 (19%)
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
W D+ F S + F+ + G + + Y + N D + T
Sbjct: 126 WIYRSDVNFAGISGGNSDNFLFNYTGGAN-DIFLNVYAPKFNGD------LTLDLNTRAR 178
Query: 122 HNALHEIGHALGLMHPGS-YNGGYPVYGVDNDYE-----------------NDSFL--TS 161
+HE+GH+LGL HP S YN + DY D + +
Sbjct: 179 QTLVHELGHSLGLSHPHSTYNVSTGKPIITTDYAATKDLGFAQLGFRINSAEDMYKEYFT 238
Query: 162 VMSYFMPQDSMMDASFGYCA-TPMVSDIVAVQKIYGAPKGSLG--NNIYKIEVQQKDSPF 218
+MSY + +S + A TPM+ D++A+Q+ YG G+ G N+ V
Sbjct: 239 IMSYDNQHSLLPGSSVIFQAYTPMILDVIALQQAYGEGTGTSGLSNDTITAGVAG----- 293
Query: 219 IQTIYDSGGDDLLDLTLI-GGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---------- 267
+T +D+GG D +DL+ GG + +N S + + G + Q+T+
Sbjct: 294 YRTYFDTGGIDTIDLSEYAGGAYLNMGVNITSAAHLVGVSVSTFDVQNTISLGKDPANLR 353
Query: 268 -----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------- 314
E GS+ D +IGNS +N G+D+ G G D+
Sbjct: 354 WFYGEYEKASGSAAADRIIGNSLDNRIDGEDGDDILTGGGGNDSLNGSGGDDNLNGQEGI 413
Query: 315 LYKIYRFE-----------NAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
IY + + V+D A+ D L ++ER+ F+D + I
Sbjct: 414 DVAIYAGSHDAFTLTRNIISGVSVHDNASIEGTDTLKEIERISFSDVNLALDVDGNAGI 472
>gi|119486279|ref|ZP_01620338.1| hypothetical protein L8106_16534 [Lyngbya sp. PCC 8106]
gi|119456492|gb|EAW37622.1| hypothetical protein L8106_16534 [Lyngbya sp. PCC 8106]
Length = 507
Score = 127 bits (318), Expect = 8e-27, Method: Composition-based stats.
Identities = 51/125 (40%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D FD YL S DL VFG D AA +HY+ G+ E R D F + Y+AS++DLI
Sbjct: 384 DFVFDPAQYLASNLDLAGVFGFDLAAANQHYLQFGINENRPVDTFDEVRYLASNQDLIGV 443
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
F P+ +H+ FG EGR F+ YL + DL+ FG+D AA +HY+ G
Sbjct: 444 FGFNPEF---ATEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLDAATQHYVQFG 500
Query: 515 VKEGR 519
EGR
Sbjct: 501 FSEGR 505
Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/122 (44%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD YL S DL VFG D AA +HY+ G+ E R D F + Y+AS++DLI F
Sbjct: 387 FDPAQYLASNLDLAGVFGFDLAAANQHYLQFGINENRPVDTFDEVRYLASNQDLIGVFGF 446
Query: 543 APDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
P+ +H+ FG EGRS FNP YL + DL FG+D AA QHY+ G E
Sbjct: 447 NPEFAT---EHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLDAATQHYVQFGFSE 503
Query: 602 GR 603
GR
Sbjct: 504 GR 505
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G D+ +G +T F + S LY + + D +++ L D
Sbjct: 326 GGFDIASSPNGSNTAFAVSNSMLYTVDLATGTAT--NVGMIGDDANLNLQGLAVVD---P 380
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDL 411
+Y AS DL V G D+ + +H+ +FG++E R + TFD YL S DL
Sbjct: 381 LTGDFVFDPAQYLASNLDLAGVFGFDLAAANQHYLQFGINENRPVDTFDEVRYLASNQDL 440
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
VFG + A HY+ G EGR+ ++F + Y+ ++ DL F + + H+
Sbjct: 441 IGVFGFNPEFATEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGND---LDAATQHYV 497
Query: 472 NFGCEEGRFV 481
FG EGR V
Sbjct: 498 QFGFSEGRIV 507
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDLRNV 498
F +Y+AS+ DL F + H+ FG E R V TFD YL S DL V
Sbjct: 387 FDPAQYLASNLDLAGVFGFD---LAAANQHYLQFGINENRPVDTFDEVRYLASNQDLIGV 443
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
FG + A HY+ G EGR+ ++F + Y+ ++ DL F + D A H+ FG
Sbjct: 444 FGFNPEFATEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLD---AATQHYVQFG 500
Query: 559 YEEGR 563
+ EGR
Sbjct: 501 FSEGR 505
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSYDDLWNV 582
F +Y+AS+ DL F + A H+ FG E R + TF+ YL S DL V
Sbjct: 387 FDPAQYLASNLDLAGVFGFD---LAAANQHYLQFGINENRPVDTFDEVRYLASNQDLIGV 443
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTD 642
FG + A +HY+ G EGR+ F V L+ + +A D
Sbjct: 444 FGFNPEFATEHYVRFGAAEGRSTN----SFNPVSYLNNNADLQAFFGNDLDAATQHYVQF 499
Query: 643 YFGDG 647
F +G
Sbjct: 500 GFSEG 504
>gi|254463780|ref|ZP_05077191.1| type I secretion target repeat protein [Rhodobacterales bacterium
Y4I]
gi|206684688|gb|EDZ45170.1| type I secretion target repeat protein [Rhodobacterales bacterium
Y4I]
Length = 414
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 79/411 (19%), Positives = 127/411 (30%), Gaps = 60/411 (14%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFD--------------ITELNPNAQEVARWALGEWSKVVD 67
W++ V+T S + +E R AL E+ +
Sbjct: 20 RWNSLSDLGTRAVVTYSFTSASELAPVSSDPYGAYRYWAFDSQQREYFRRALDEFEEASG 79
Query: 68 LTFEETSIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ F ETS + I F Y N + + I G+ LH
Sbjct: 80 VIFVETSGPAMINVFGYDGGSAAGWADYPWASSYSTNEGRLAIEGGNIMPGSFGYETVLH 139
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGHALGL HP + + D+ +VM+Y + Y
Sbjct: 140 EIGHALGLKHPHDGDTTLADHL-------DTQANTVMTY--------SYAGYYVTELGTF 184
Query: 187 DIVAVQKIYGAPKGSL---------GNNIYKIEVQQKDSPFI---QTIYDSGGDDLLDLT 234
D+ A+Q IYG+ G+ G + + + +Y GG D L
Sbjct: 185 DVQALQHIYGSSAGTAEWSVRVKSGGMVVIDTSAAAETVLAVGQSSKVYGRGGSDTLIGR 244
Query: 235 LIG----GVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
G G L GG ++ I E + D ++G +
Sbjct: 245 EAGDKLIGGAGLDTLIGGYGEDRLFGGKGADVLIGGLDDDEYSGSTGEADKLVGGGGWDT 304
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN----EHKQDFLSDVERL 344
+G+D G +G D S R + + A+ E DF +++
Sbjct: 305 LSGGAGDDTLVGGNGRDRLIGGDGSDQLTGGRHADTFVFVSADYYEQEVITDFGVGGDKI 364
Query: 345 RFADQCIDS------VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
F+ +DS + + Y YE I++ G + F F
Sbjct: 365 EFSGTSVDSFSDLLISQSGGSTFISYYGQYE--IELTGFTGTLTQDDFLFF 413
>gi|119487036|ref|ZP_01620908.1| putative alkaline phosphatase [Lyngbya sp. PCC 8106]
gi|119455965|gb|EAW37099.1| putative alkaline phosphatase [Lyngbya sp. PCC 8106]
Length = 734
Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D F Y+A++ D+ A +++ G HF G + R + + YL + ++
Sbjct: 6 DLFNEAFYLANNPDVEAAVE--AGIIESGFAHFIESGQFQVRQPSPLYSELDYLAANPNI 63
Query: 496 RNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
R+ +H+I G E RNP F L Y+ + D+ + + +H
Sbjct: 64 RDAVTQGIINNGFQHFIEFGQFERRNPSPLFDTLFYLTQNPDVNT---IVNEGILTAIEH 120
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA----LGI 607
F FG E R+ + +NP+ YL+ D+ D +HY+ G + R L
Sbjct: 121 FVKFGQFEDRAPSLLYNPNYYLSQNPDVAVAVERDELTGIEHYLDIGAAQNRNFSAFLSP 180
Query: 608 SGMQFKSVMNLSEKSRDKADLSL 630
G F + +++ + ++ A L
Sbjct: 181 DGSPFPNQVSVGDVTQTSAILLT 203
Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
F+ YL + D+ + + H+I G + R P + L+Y+A++ ++ +A
Sbjct: 8 FNEAFYLANNPDVEAAVEAGIIESGFAHFIESGQFQVRQPSPLYSELDYLAANPNIRDAV 67
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
++ G HF FG E R + FD+ YL D+ + A H++ G
Sbjct: 68 TQG--IINNGFQHFIEFGQFERRNPSPLFDTLFYLTQNPDVNTIVNEGILTAIEHFVKFG 125
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
E R P Y S + + +L G +H+ + G + R+ +
Sbjct: 126 QFEDRAPSLLYNPNYYLSQNPDVAVAVERDEL--TGIEHYLDIGAAQNRNFS 175
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 7/149 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV-FESMKHFYEFGLSEGRDI 397
S + Q S L+Y A+ ++ + Q + +HF EFG E R+
Sbjct: 31 SGFAHFIESGQFQVRQPSPLYSELDYLAANPNIRDAVTQGIINNGFQHFIEFGQFERRNP 90
Query: 398 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
+ FD+ YL D+ + A H++ G E R P + Y++ + D+
Sbjct: 91 SPLFDTLFYLTQNPDVNTIVNEGILTAIEHFVKFGQFEDRAPSLLYNPNYYLSQNPDVAV 150
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
A G +H+ + G + R +
Sbjct: 151 AVERDEL---TGIEHYLDIGAAQNRNFSA 176
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 2/103 (1%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT- 398
+ Q L Y D+ ++ + + +++HF +FG E R +
Sbjct: 75 GFQHFIEFGQFERRNPSPLFDTLFYLTQNPDVNTIVNEGILTAIEHFVKFGQFEDRAPSL 134
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++ YL D+ D HY+ G + RN AF
Sbjct: 135 LYNPNYYLSQNPDVAVAVERDELTGIEHYLDIGAAQNRNFSAF 177
Score = 44.0 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+P + Y +N + NE L+ +E Q D + Y + D
Sbjct: 91 SPLFDTLFYLTQNPDVNTIVNEGI---LTAIEHFVKFGQFEDRAPSLLYNPNYYLSQNPD 147
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + +D ++H+ + G ++ R+ +
Sbjct: 148 VAVAVERDELTGIEHYLDIGAAQNRNFS 175
>gi|291527344|emb|CBK92930.1| Listeria/Bacterioides repeat [Eubacterium rectale M104/1]
Length = 1081
Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 15/206 (7%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
Q Y S L ++ D + +F E + FD+ YL + D++N +
Sbjct: 383 SNQSDATNYLGSETALKKLGIADAQGIVNYFGL--KQEDYHLIFDASYYLNNNPDVKNNW 440
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G+ AA +H+I +G+ EGR + F Y ++ DL NAF D L H+ G
Sbjct: 441 GNTAEAALQHFIKYGMAEGRRGNEIFDVHFYKDNNIDLQNAFGDNWYLYYQ---HYLENG 497
Query: 475 CEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL----- 527
EGR FD Y Y DL++ FG D HYI++G+ E R+ +
Sbjct: 498 IREGRQASENFDVISYKTRYRDLQSAFGDDYEGYVDHYISYGINEERDASPLRYKVDFVD 557
Query: 528 --EYIASHEDLINAFADAPDLVQAGK 551
+ + S L A AP++ + G
Sbjct: 558 NGQIVESQNVLCMRGAKAPEITKTGY 583
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDH----FSNFGCE-EGRFVTFDSYLYLGS 491
P YI++ D N L ++G + FG + E + FD+ YL +
Sbjct: 373 PGIIIEHAYISNQSDATNYLGSETALKKLGIADAQGIVNYFGLKQEDYHLIFDASYYLNN 432
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAG 550
D++N +G+ AA +H+I +G+ EGR + F Y ++ DL NAF D
Sbjct: 433 NPDVKNNWGNTAEAALQHFIKYGMAEGRRGNEIFDVHFYKDNNIDLQNAFGDN---WYLY 489
Query: 551 KDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
H+ G EGR F+ Y T Y DL + FG D HYI++G+ E R
Sbjct: 490 YQHYLENGIREGRQASENFDVISYKTRYRDLQSAFGDDYEGYVDHYISYGINEERDASP 548
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
N + ++ + + Y + DL G + + +H+ E G
Sbjct: 438 NNWGNTAEAALQHFIKYGMAEGRRGNEIFDVHFYKDNNIDLQNAFGDNWYLYYQHYLENG 497
Query: 391 LSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ EGR FD Y Y DL++ FG D HYI++G+ E R+
Sbjct: 498 IREGRQASENFDVISYKTRYRDLQSAFGDDYEGYVDHYISYGINEERDASPL 549
>gi|144897609|emb|CAM74473.1| Peptidase M10A and M12B, matrixin and adamalysin [Magnetospirillum
gryphiswaldense MSR-1]
Length = 1536
Score = 124 bits (310), Expect = 6e-26, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 89/237 (37%), Gaps = 34/237 (14%)
Query: 13 IADHLLRDQYWSNYFIRYK-----------PDVLTTHRLSFDITELNPNAQEVARWALGE 61
LL Q W++ P + + + ++ AR AL +
Sbjct: 449 AIQELLSGQKWTDINADGSTIITYSFPDNVPVDYAGQIEAGGFSSFSDPQKDAARAALAQ 508
Query: 62 WSKVVDLTFEETSI-HSDIKFISSNNG----YVCTPRYDSRYFMEINFDKADVWRYGIGK 116
W+ ++TF E + +I+F ++ G + P + I D AD +
Sbjct: 509 WAAAANITFVEVTGDGGEIRFANTTLGPDVAWTYLPGEGQGGDVWIAPDYAD--NGQLNP 566
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
G LHEIGHALGL H G YNGG DS L S+MSYF +
Sbjct: 567 GEYGYFTLLHEIGHALGLEHAGDYNGGGSP-----TNAYDSRLYSIMSYFGGS------A 615
Query: 177 FGYCATPMVSDIVAVQKIYGA-----PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
Y +DI A+Q +YGA LG ++ + ++ + D GD
Sbjct: 616 LEYPLNLQENDIAAIQALYGAKGVDLASYFLGGLSVTLQAGNAGAAWMVSDIDYDGD 672
>gi|163748242|ref|ZP_02155537.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Oceanibulbus indolifex HEL-45]
gi|161378489|gb|EDQ02963.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Oceanibulbus indolifex HEL-45]
Length = 351
Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 100/245 (40%), Gaps = 43/245 (17%)
Query: 179 YCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ TPM+ DI+A Q +YG +LG++IY Q + +TI+D+GG D D + I
Sbjct: 3 FPTTPMILDILAAQWLYGPNMNTNLGDDIYAFSPSQ---TYHETIWDAGGIDTFDASEIT 59
Query: 238 GVKNYIDLNTESWSSIG------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
IDL + S +G + + IA IE+ +G G+D + GN
Sbjct: 60 -TGVSIDLRPGTLSDVGSTITAATISGTTALTETVGIAFGAFIENAIGGDGSDSLRGNEL 118
Query: 286 NNVFF---------ESSGNDVFDGSSGL------DTFFYYAPSYLYKIYRFENAIIVYDA 330
NN+ + G+DV +S DT ++ S + I V A
Sbjct: 119 NNILWGGDGADIMGGGGGSDVLIAASQSTQPGTGDTAYFEGRSDTFDIV-GGIDYTVVTA 177
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ +D L + LRF DQ I+ S L ED + + E + YE
Sbjct: 178 TDGSRDKLFGFQFLRFDDQLIEL---NAGSALAGAGRPEDFV------IAERVALLYEAA 228
Query: 391 L-SEG 394
L EG
Sbjct: 229 LNREG 233
>gi|163742500|ref|ZP_02149886.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis 2.10]
gi|161384085|gb|EDQ08468.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis 2.10]
Length = 413
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 64/348 (18%), Positives = 106/348 (30%), Gaps = 34/348 (9%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
I + ++ P + + + + + +++ R L + + + F
Sbjct: 26 EIGTQAIITYSFTETGSLADPAASDPYGAT-EYWSFDEDQRDIFREGLSLYEDISGVRFI 84
Query: 72 ETSIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E I F ++ + V + KGT LHEIGH
Sbjct: 85 EVEGRGMINAFGTTGSSAGGWANIAMSGNGFTGRGDLTVDTDVMTKGTYGYVTVLHEIGH 144
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LGL H G+ D D+ +VM+Y + S Y DI A
Sbjct: 145 TLGLQHSHD-------GGLTLDRHTDTPENTVMTY--------NHSPAYVTELGTFDIQA 189
Query: 191 VQKIYGAPKGSLGNNIYK------------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+Q +YG G I + TI GG D +
Sbjct: 190 MQHLYGNSDSFTGWEILGGGSDPIIIRSTDASETVIGTDQNTTINAKGGHDHVQGREADD 249
Query: 239 VKNYIDLNTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
D +G G + T ++ G S +DV+ GN +++ S
Sbjct: 250 TLRGADGRDTMVGGLGEDRLFGGNGADLLIGGTGGDAYSGGSDDDVLYGNRGHDMLHGGS 309
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GND G G DT S + + A+ + ++D
Sbjct: 310 GNDHLLGGIGRDTLVGGDGSDTLTGGTGADTFVFDQADAFDTNRITDF 357
>gi|189424584|ref|YP_001951761.1| glycosyl transferase family 2 [Geobacter lovleyi SZ]
gi|189420843|gb|ACD95241.1| glycosyl transferase family 2 [Geobacter lovleyi SZ]
Length = 857
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 92/247 (37%), Gaps = 35/247 (14%)
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 451
EG + FDS YL +Y ++ G D HY+ HGV +P F Y+ + D
Sbjct: 78 EG-SVLFDSAFYLHNYPEIALA-GMD---PVIHYLEHGVSGYYDPHPLFSTRWYLKLYPD 132
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ + + HF FG E R FD LY+ Y D+ N H
Sbjct: 133 VAASGINP-------LLHFIEFGAREFRVPHPLFDPCLYVSQYPDVFNSG----MNLLEH 181
Query: 510 YITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-- 566
Y+ G EGR P F A Y+ + ++ + +H+ +G +
Sbjct: 182 YVRFGGDEGRRPHWLFHAQAYLEHYPEIRGSGMTP-------LEHYCRYGRGSVYQVHQL 234
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR--ALGISGMQFKSVMNLSEKSRD 624
FNP YL+ Y D+ HY+ G EGR + S ++ +++
Sbjct: 235 FNPVFYLSRYVDVLE----QSDNPLIHYLVTGADEGRDPSSTFSTESYRKQFPDLKRAGI 290
Query: 625 KADLSLS 631
+ +
Sbjct: 291 NPLVHFA 297
Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 74/228 (32%), Gaps = 27/228 (11%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DIT 398
+ L S Y Y D+ + HF EFG E R
Sbjct: 104 IHYLEHGVSGYYD-PHPLFSTRWYLKLYPDVAA----SGINPLLHFIEFGAREFRVPHPL 158
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD LY+ Y D+ N HY+ G EGR P F A Y+ + ++ +
Sbjct: 159 FDPCLYVSQYPDVFN----SGMNLLEHYVRFGGDEGRRPHWLFHAQAYLEHYPEIRGSGM 214
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+H+ +G V F+ YL Y D+ HY+ G
Sbjct: 215 TP-------LEHYCRYGRGSVYQVHQLFNPVFYLSRYVDVLEQ----SDNPLIHYLVTGA 263
Query: 516 KEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDH-FSNFGYEE 561
EGR+P F Y DL A + + D+ + G E
Sbjct: 264 DEGRDPSSTFSTESYRKQFPDLKRAGINPLVHFASRIDYRWFMAGTNE 311
>gi|238757394|ref|ZP_04618580.1| Metalloprotease [Yersinia aldovae ATCC 35236]
gi|238704433|gb|EEP96964.1| Metalloprotease [Yersinia aldovae ATCC 35236]
Length = 206
Score = 122 bits (305), Expect = 3e-25, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + I+D+ G+D LD + V IDL +S GG N++IA +T IE+ +
Sbjct: 3 NEKQQIVHCIWDADGNDTLDFSGYS-VDQIIDLRPGHFSCTGGLYYNVSIAFNTFIENAI 61
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
G SG+D + GN NN SGND +G +G D + +Y
Sbjct: 62 GGSGDDYLKGNKGNNTLKGESGNDELEGGAGADDLWGGNGYDIY 105
>gi|3062797|dbj|BAA25683.1| Insecticidal protein [Serratia marcescens]
Length = 172
Score = 122 bits (305), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 57/152 (37%), Gaps = 14/152 (9%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSN---NGYVCTP-RYDS 96
++ QE A+ +L W+ V ++ F E + S+I F + Y P Y+
Sbjct: 21 GLSAFTQQQQEQAKLSLQSWADVANIKFVEVAAGQPSNITFGNYEGTGQAYALKPFSYNG 80
Query: 97 RYFMEINFDKADVWRYG-------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG- 148
+ N D + G HE+GH LGL HPG+YN G
Sbjct: 81 NDYRGFNSDGQSWYNIKNHSENLHPELGNYGRLTITHEVGHTLGLDHPGTYNAGQGSPNY 140
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
Y D+ SVMSY+ + D Y
Sbjct: 141 TKAVYAEDTRQFSVMSYWNESITNADHGHYYA 172
>gi|284054806|ref|ZP_06385016.1| lipolytic enzyme, G-D-S-L [Arthrospira platensis str. Paraca]
Length = 300
Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 23/242 (9%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y+A ++D+ +A AD L + +HFS +G EGR FDS YL D+++
Sbjct: 8 FDEGFYLAQNQDVQDAIADG--LFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDIQS 65
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
AA H++ G + R+P+ F + Y+ + + A+ +HF
Sbjct: 66 EVEEGITTAAAHFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVANGEF---TAFEHFLK 122
Query: 557 FGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGRALGISGMQ-- 611
G EG S +FN + Y D + + +H+ G++ GR +
Sbjct: 123 IGQFEGLDPSESFNTEFYRDRNFDAVEGIEDEIIGSIFEHFYRFGLELGRLGAPPQLMDD 182
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLYTD----------YFGDGNYYDSDLYSMHDIN 661
+ + L + ++ D V++Y F G D+++ + DIN
Sbjct: 183 LSNAIALDTLLGSRTIVNSVTDDNPVNIYEFIIPNNGSEFSLFLHGLKADANVDLIQDIN 242
Query: 662 HD 663
+
Sbjct: 243 QN 244
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 13/181 (7%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y A +D+ I +FE + +HF +G EGR+ FDS YL D+++
Sbjct: 6 TLFDEGFYLAQNQDVQDAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDIQS 65
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
AA H++ G + R+P+ F + Y+ + + A+ +HF
Sbjct: 66 EVEEGITTAAAHFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVANGEF---TAFEHFLK 122
Query: 473 FGCEEGRFV--TFDSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGR---NPDAFKA 526
G EG +F++ Y D + + G+ H+ G++ GR P
Sbjct: 123 IGQFEGLDPSESFNTEFYRDRNFDAVEGIEDEIIGSIFEHFYRFGLELGRLGAPPQLMDD 182
Query: 527 L 527
L
Sbjct: 183 L 183
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 62/181 (34%), Gaps = 16/181 (8%)
Query: 331 NEHKQDFLSD------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N+ QD ++D E Q Y A D+ + + + +
Sbjct: 17 NQDVQDAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDIQSEVEEGITTAAA 76
Query: 385 HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFK 441
HF G ++ R FD YL + + A H++ G EG +P +F
Sbjct: 77 HFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVANGEFTAFEHFLKIGQFEGLDPSESFN 136
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Y + D + D +++ +HF FG E GR + DDL N
Sbjct: 137 TEFYRDRNFDAVEGIED--EIIGSIFEHFYRFGLELGRLGAPPQLM-----DDLSNAIAL 189
Query: 502 D 502
D
Sbjct: 190 D 190
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+A ++D+ +A AD L + +HFS +G EGR+ F+ + YL D+
Sbjct: 7 LFDEGFYLAQNQDVQDAIADG--LFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDIQ 64
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
+ + AA H++ G + R+ F V L +
Sbjct: 65 SEVEEGITTAAAHFVNIGQTDNRS---PNPFFDPVFYLQQN 102
>gi|220924211|ref|YP_002499513.1| Lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium nodulans ORS 2060]
gi|219948818|gb|ACL59210.1| Lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium nodulans ORS 2060]
Length = 1366
Score = 121 bits (304), Expect = 4e-25, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 100/293 (34%), Gaps = 30/293 (10%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
Y +SYED+ + + H+ E+G +EGR FD YL +Y + +
Sbjct: 29 YLSSYEDVAAA----GVDPIHHYLEYGAAEGRLPTPLFDPEWYLRAYPESAR----NHRL 80
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
++ G + GRNP L + +++E+ P L + + ++
Sbjct: 81 PFVDFMHEGARLGRNPHPLCDLAWFSANEEQDRGADIHPFLDFLDAVNSNSRKLH----P 136
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD+ Y Y D+ HYI G K +P F Y+ I A
Sbjct: 137 LFDASWYTKKYPDVLTSG----FPPFVHYILLGAKRRYDPHPLFDTAYYLDQFGSDI-AE 191
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
D P + ++ + + FN YL D+ + +H++ G
Sbjct: 192 IDNPLVDYL----YNRSNWNKSPHPLFNSSWYLAQNADVA----NHGLNPLRHFVQSGFS 243
Query: 601 EGRALG--ISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYD 651
EGR + + ++ + + ++ + N+Y
Sbjct: 244 EGRKPCALFHTSWYAAHYLDGATAQLNPVVDYLCGGAEAGRNPNFVFNSNWYM 296
Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 89/266 (33%), Gaps = 36/266 (13%)
Query: 370 DLIQVIGQDVFESMKH------FYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
DL + + F + S R FD+ Y Y D+
Sbjct: 101 DLAWFSANEEQDRGADIHPFLDFLDAVNSNSRKLHPLFDASWYTKKYPDVLT----SGFP 156
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
HYI G K +P F Y+ I A D P + + ++ +
Sbjct: 157 PFVHYILLGAKRRYDPHPLFDTAYYLDQFGSDI-AEIDNPLVDYL----YNRSNWNKSPH 211
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
F+S YL D+ N G + RH++ G EGR P A + A+H +
Sbjct: 212 PLFNSSWYLAQNADVAN-HGLN---PLRHFVQSGFSEGRKPCALFHTSWYAAH------Y 261
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITF--NPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
D + G E GR+ F N + Y+ D+ + HYI G
Sbjct: 262 LDGATAQLNPVVDYLCGGAEAGRNPNFVFNSNWYMLHNGDVAAA----KLNPLVHYIMSG 317
Query: 599 MKEGRALG--ISGMQFKSVMNLSEKS 622
+EGR G +++ + +S
Sbjct: 318 WREGRDPGPLFDSSWYQARYPETNRS 343
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/284 (20%), Positives = 98/284 (34%), Gaps = 41/284 (14%)
Query: 330 ANEHKQDFLSDVE-RLRFADQCIDSVN--VKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +QD +D+ L F D + YT Y D++ F H+
Sbjct: 106 SANEEQDRGADIHPFLDFLDAVNSNSRKLHPLFDASWYTKKYPDVL----TSGFPPFVHY 161
Query: 387 YEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 443
G D FD+ YL + ++ Y+ + ++P F +
Sbjct: 162 ILLGAKRRYDPHPLFDTAYYLDQFGSDI----AEIDNPLVDYLYNRSNWNKSPHPLFNSS 217
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGS 501
Y+A + D+ N + HF G EGR F + Y Y D +
Sbjct: 218 WYLAQNADVANHGLNP-------LRHFVQSGFSEGRKPCALFHTSWYAAHYLD----GAT 266
Query: 502 DRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
+ Y+ G + GRNP+ F + Y+ + D+ A + H+ G+
Sbjct: 267 AQLNPVVDYLCGGAEAGRNPNFVFNSNWYMLHNGDVAAAKLNP-------LVHYIMSGWR 319
Query: 561 EGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
EGR F+ Y Y + +HY+T G++ G
Sbjct: 320 EGRDPGPLFDSSWYQARYPE----TNRSDIDPLEHYLTMGLQAG 359
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 10/72 (13%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLS---EKSR 623
F+ YL+SY+D+ HY+ +G EGR + F L E +R
Sbjct: 24 FDKFWYLSSYEDVAAA----GVDPIHHYLEYGAAEGR---LPTPLFDPEWYLRAYPESAR 76
Query: 624 DKADLSLSFDHK 635
+ + F H+
Sbjct: 77 NHRLPFVDFMHE 88
>gi|58038685|ref|YP_190649.1| hypothetical protein GOX0204 [Gluconobacter oxydans 621H]
gi|58001099|gb|AAW59993.1| Hypothetical protein GOX0204 [Gluconobacter oxydans 621H]
Length = 1260
Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 79/218 (36%), Gaps = 43/218 (19%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 452
G FD++ YL S DL + A RHY HG +EGR P+ F Y++ + D+
Sbjct: 29 GHSGIFDAFYYLKSNPDLHTL----GTAVLRHYHQHGWREGRKPNPFFDPHWYLSKNRDV 84
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHY 510
I H+ G EGR FD Y +Y +R A HY
Sbjct: 85 I----------GDPLLHYILHGEREGRRPIAWFDPVWYARTY------HVPERMLALAHY 128
Query: 511 ITHGVK-EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TF 567
+ + R F Y+ ++ D+ A D +H+ G+ E R F
Sbjct: 129 LKNRHNTPLRPIPEFDPDFYLRAYPDVAKAGLD-------ALEHYMVQGFREARKPFDGF 181
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
+P Y Y + S S HY+ E R
Sbjct: 182 DPLYYRRKY-----LRHSPDSNPLLHYL-----ENRNR 209
Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 67/189 (35%), Gaps = 30/189 (15%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSY 408
+ Y S DL + ++H+++ G EGR + FD + YL
Sbjct: 26 QILGHSGIFDAFYYLKSNPDLHTL----GTAVLRHYHQHGWREGRKPNPFFDPHWYLSKN 81
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGK 467
D+ G HYI HG +EGR P F + Y ++ +
Sbjct: 82 RDV-------IGDPLLHYILHGEREGRRPIAWFDPVWYARTY---------HVPERMLAL 125
Query: 468 DHFS--NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAF 524
H+ FD YL +Y D+ G D A HY+ G +E R P D F
Sbjct: 126 AHYLKNRHNTPLRPIPEFDPDFYLRAYPDVAKA-GLD---ALEHYMVQGFREARKPFDGF 181
Query: 525 KALEYIASH 533
L Y +
Sbjct: 182 DPLYYRRKY 190
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
G S F+ YL S DL + +A +HY HG +EGR F LS+
Sbjct: 29 GHSGIFDAFYYLKSNPDLHTL----GTAVLRHYHQHGWREGRK---PNPFFDPHWYLSKN 81
>gi|163738105|ref|ZP_02145521.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis BS107]
gi|161388721|gb|EDQ13074.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis BS107]
Length = 413
Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats.
Identities = 65/348 (18%), Positives = 107/348 (30%), Gaps = 34/348 (9%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
I + ++ P V + + + + + +++ R L + + + F
Sbjct: 26 EIGTQAIITYSFTETGSLADPAVSDPYGAT-EYWSFDEDQRDIFREGLSLYEDISGVRFI 84
Query: 72 ETSIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E I F ++ + V + KGT LHEIGH
Sbjct: 85 EVEGRGMINAFGTTGSSAGGWANISMSGNGFTGRGDLTVDTDVMTKGTYGYVTVLHEIGH 144
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LGL H G+ D D+ +VM+Y + S Y DI A
Sbjct: 145 TLGLQHSHD-------GGLTLDRHADTPENTVMTY--------NHSPAYVTELGTFDIQA 189
Query: 191 VQKIYGAPKGSLGNNIYK------------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+Q +YG G I + TI GG D +
Sbjct: 190 MQHLYGNSDSFTGWEILGGGSDPIIIRSTDASETVIGTDQNTTINAKGGHDHVQGREADD 249
Query: 239 VKNYIDLNTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
D +G G + T ++ G S +DV+ GN +++ S
Sbjct: 250 TLRGADGRDTMVGGLGEDRLFGGNGADLLIGGTGGDAYSGGSDDDVLYGNRGHDMLHGGS 309
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GND G G DT S + + A+ + ++D
Sbjct: 310 GNDHLLGGIGRDTLAGGDGSDTLTGGTGADTFVFDQADAFDTNRITDF 357
>gi|148241799|ref|YP_001226956.1| hypothetical protein SynRCC307_0700 [Synechococcus sp. RCC307]
gi|147850109|emb|CAK27603.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 404
Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats.
Identities = 86/376 (22%), Positives = 133/376 (35%), Gaps = 72/376 (19%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSD--IKFISSNNGYVCTPRYDSRYFMEINFDKADV 109
Q VAR ++DL FE T +S I +++G C ++E+ D+
Sbjct: 52 QTVARL-----DNIIDLDFEYTGNYSQSVIDVRLNDSGPFCGQAAAMDGYIEL-----DI 101
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ 169
W G + +HE+GHALGL PG + ++ D + MSY
Sbjct: 102 WTNGSNS-NDRKNTFIHELGHALGLGEPG----------WNRRWDQDD---TAMSYNKGN 147
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPK----------GSLGNNIYKIEVQQ------ 213
GY SDI A+ I+G +L NN+Y +
Sbjct: 148 ------VGGYATWYRSSDINALISIWGRENDHKNQTQRGKANLANNLYGGKGNDKLFGGN 201
Query: 214 -----KDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+++ S G+D + D N I+LNT SW + G +
Sbjct: 202 KSDILSGGNGADSLFASLGNDTINGGSGRDTAQFSSRSNRINLNTTSWQNTGDGRDRLI- 260
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
IE+V SGNDVV GN N +G+DV +G++G D + K
Sbjct: 261 ----SIENVNAGSGNDVVTGNRGANTLKGQNGHDVLNGAAGRDYLIGGRGNDRLKGGSGN 316
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++ D L D + S I+++ + + G D
Sbjct: 317 DKLL----GGQGNDKLWGQ---GGRDTFVLSEGAGYDRIMDFRNGQDRIQLGSGVDNLRI 369
Query: 383 MKHFYEFGL-SEGRDI 397
H EGRD+
Sbjct: 370 NNHRNGHAYVYEGRDL 385
>gi|126734587|ref|ZP_01750333.1| hypothetical protein RCCS2_11959 [Roseobacter sp. CCS2]
gi|126715142|gb|EBA12007.1| hypothetical protein RCCS2_11959 [Roseobacter sp. CCS2]
Length = 421
Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats.
Identities = 80/397 (20%), Positives = 130/397 (32%), Gaps = 80/397 (20%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELN--------PNAQEVARWALGEWSKVVDLTFEETS 74
W +T S +I+ LN + A W+ + ++TF+ S
Sbjct: 35 WGGDRFGASGGTVTY---SSNISGLNGGLTGAALAAFESAIELAFATWAALANITFQAVS 91
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFM--------------------EINFDKADVWRYGI 114
+DI+ S + P + FM EI FD+A+ W
Sbjct: 92 GAADIEIRSDSVDGNGGPDGNVLGFMRPTDFETIFVGDEFAIFDDVEIVFDRAENWAVDG 151
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G GT ALHEIGHALG+ H + + G + ++ D +
Sbjct: 152 GSGTSFFAVALHEIGHALGMDHVPNVSDGGTLQNMNPILSTDELQS-------------- 197
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
DI + +YG + S G + + + + Q I+ GG+D + T
Sbjct: 198 -----------GDIAGIGTLYGDREYSDG--VDNVSFAKVNVDTGQVIFSKGGNDNVTGT 244
Query: 235 --------------LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
L GG N ++T + I G TI G++GND +
Sbjct: 245 DFGDSIYGGAGNDHLFGGGGNDRLVDTRGDNDIEGGNGGDTIIGGAGAIDADGNNGNDTL 304
Query: 281 IGNSANNVFFESSGNDVFDGS------SGLDTFFYYAPSYLYKIYRFENAIIVYDA--NE 332
IG N+ SGND G +G DT + + + + + A N
Sbjct: 305 IGGIGNDTLNGGSGNDTLRGDPSGSFIAGNDTLIAGSGNDELEGGGGADTFVFSRASGNN 364
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
DF V+ + + + +
Sbjct: 365 RILDFEIGVDEIDLQGFGFSQGTLTDNGTNSFFSFNA 401
>gi|307152890|ref|YP_003888274.1| family 2 glycosyl transferase [Cyanothece sp. PCC 7822]
gi|306983118|gb|ADN14999.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7822]
Length = 880
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/257 (18%), Positives = 83/257 (32%), Gaps = 39/257 (15%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDL 411
++ Y ++ + + + H+ + G EGR+ FDS Y+ + D+
Sbjct: 24 IHSNLFDSDYYCEKNPEVKKY----KIDPLGHYIDIGSREGRNPHPLFDSAYYIENNPDV 79
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHF 470
H+I HG +E RNP F Y+ Q HF
Sbjct: 80 AK----SGIPPLIHFIYHGAREKRNPHPLFNTEFYLKQ--------IKTDLGQQNPLGHF 127
Query: 471 SNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
G EG FD+ YL Y HY+ G K G +P F
Sbjct: 128 CQVGIFEGLDPHPLFDTSYYLNRYSKQLPQ----NINPLVHYLQEGAKLGYDPHPLFDTS 183
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE--GRSITFNPDLYLTSYDDLWNVFGS 585
Y+ + ++ + + ++ N G +E F+ + Y+ +
Sbjct: 184 FYLEQNPQILASDINP-------LIYYINNGVKEELNPHPLFDTNFYIKQI----KLDLE 232
Query: 586 DRSAAAQHYITHGMKEG 602
H++ G +G
Sbjct: 233 KTLNPLIHFLQIGSFQG 249
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/290 (18%), Positives = 88/290 (30%), Gaps = 46/290 (15%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLR 412
Y + D+ + + HF G E R+ F++ YL ++
Sbjct: 63 PHPLFDSAYYIENNPDVAK----SGIPPLIHFIYHGAREKRNPHPLFNTEFYLKQ---IK 115
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G + H+ G+ EG +P F Y+ + + + H+
Sbjct: 116 TDLG--QQNPLGHFCQVGIFEGLDPHPLFDTSYYLNRYSKQLPQNINP-------LVHYL 166
Query: 472 NFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 528
G + G FD+ YL + SD +YI +GVKE NP F
Sbjct: 167 QEGAKLGYDPHPLFDTSFYLEQNP---QILASDIN-PLIYYINNGVKEELNPHPLFDTNF 222
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSD 586
YI + + + HF G +G F+ YL + L
Sbjct: 223 YIKQIKLDLEKTLNP-------LIHFLQIGSFQGLDPHSLFHTSHYLENNPGL------- 268
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKK 636
H+I G +E + + E + S F K
Sbjct: 269 DMNPLVHFIQWGARE----KQDPFCYAKLFPERENEDQSLNNSPDFSCPK 314
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 10/141 (7%)
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
Q SD+ L + + + + Y I++ + + HF + G +G
Sbjct: 191 QILASDINPLIYYINNGVKEELNPHPLFDTNF-YIKQIKLDLEKTLNPLIHFLQIGSFQG 249
Query: 395 RDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
D F + YL + G D H+I G +E ++P + L +ED
Sbjct: 250 LDPHSLFHTSHYLENNP------GLDMN-PLVHFIQWGAREKQDPFCYAKLFPERENEDQ 302
Query: 453 INAFADAPDLVQVGKDHFSNF 473
+ + ++ +
Sbjct: 303 SLNNSPDFSCPKSLDSNYQQW 323
Score = 40.5 bits (93), Expect = 0.84, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 7/55 (12%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
F+ D Y ++ + HYI G +EGR F S +
Sbjct: 29 FDSDYYCEKNPEVKKY----KIDPLGHYIDIGSREGRN---PHPLFDSAYYIENN 76
>gi|329848956|ref|ZP_08263984.1| glycosyl transferase group 1 family protein [Asticcacaulis
biprosthecum C19]
gi|328844019|gb|EGF93588.1| glycosyl transferase group 1 family protein [Asticcacaulis
biprosthecum C19]
Length = 1006
Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 89/268 (33%), Gaps = 48/268 (17%)
Query: 379 VFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR- 435
E++ H+ G +G + + FD+ YL S DL V G+ HY+ HG EGR
Sbjct: 33 PEEALNHYNVEGWQKGLNPSTLFDTKFYLKSNPDLHAV-----GSPLSHYLKHGQFEGRR 87
Query: 436 -----------NPDAFKALEYIASHEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFV 481
+P E + H D FA + + D H+ +G +
Sbjct: 88 RLSTVARTEALSPQGLTLYEKLKPHADPAYYFAQSGHPLACDVDPVMHYFAYGHGSRLRL 147
Query: 482 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
T FD+ YL D+ HY G +E R AL + +
Sbjct: 148 TDKFDNQFYLDHNPDVARSGQE----PLIHYTRFGWREMRRSGPGPALFPLPPADAEKVT 203
Query: 540 FADAP--------------DLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVF 583
+ H+ FG G S+ F+ YL D+ +
Sbjct: 204 LIQQNMEAEYYQSKLPWLKETDADPAAHYLFFGERAGYDPSVDFSSAYYLQENGDVREM- 262
Query: 584 GSDRSAAAQHYITHGMKEGRALGISGMQ 611
A HY+ G +EGR +G
Sbjct: 263 ---GFNAYYHYLAFGAREGRQATPTGYS 287
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 73/261 (27%), Gaps = 60/261 (22%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--------DITFDSYLY-- 404
Y S DL V + H+ + G EGR
Sbjct: 51 PSTLFDTKFYLKSNPDLHAV-----GSPLSHYLKHGQFEGRRRLSTVARTEALSPQGLTL 105
Query: 405 ---LGSYDDLRNVFGSDRGA------AARHYITHGV-KEGRNPDAFKALEYIASHEDLIN 454
L + D F HY +G R D F Y+ + D+
Sbjct: 106 YEKLKPHADPAYYFAQSGHPLACDVDPVMHYFAYGHGSRLRLTDKFDNQFYLDHNPDVAR 165
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF--------------- 499
+ + H++ FG E R L+ D V
Sbjct: 166 SGQEP-------LIHYTRFGWREMRRSGPGPALFPLPPADAEKVTLIQQNMEAEYYQSKL 218
Query: 500 ----GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+D AA HY+ G + G +P F + Y+ + D+ ++ H+
Sbjct: 219 PWLKETDADPAA-HYLFFGERAGYDPSVDFSSAYYLQENGDVR-------EMGFNAYYHY 270
Query: 555 SNFGYEEGRSITFNPDLYLTS 575
FG EGR T L +
Sbjct: 271 LAFGAREGRQATPTGYSALRA 291
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 65/196 (33%), Gaps = 36/196 (18%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQV-GKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
D F Y F P +H++ G ++G + FD+ YL S
Sbjct: 13 SDLFDFDAY-------RRYFETPPFATPEEALNHYNVEGWQKGLNPSTLFDTKFYLKSNP 65
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGR------------NPDAFKALEYIASHEDLINAFA 541
DL V G+ HY+ HG EGR +P E + H D FA
Sbjct: 66 DLHAV-----GSPLSHYLKHGQFEGRRRLSTVARTEALSPQGLTLYEKLKPHADPAYYFA 120
Query: 542 DAPDLVQAGKD---HFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
+ + D H+ +G+ +T F+ YL D+ HY
Sbjct: 121 QSGHPLACDVDPVMHYFAYGHGSRLRLTDKFDNQFYLDHNPDVARSGQE----PLIHYTR 176
Query: 597 HGMKEGRALGISGMQF 612
G +E R G F
Sbjct: 177 FGWREMRRSGPGPALF 192
>gi|194337579|ref|YP_002019373.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310056|gb|ACF44756.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
Length = 1099
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD------VFESMKHFYEFGLSEGRDITFDSYLY 404
+ S+ +Y ASY DL+ +G D + +H+ + SEGR ITF+++ Y
Sbjct: 2 VTSIVAGSLDSWQYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEY 61
Query: 405 LGSYDDLRNVFG------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
L S DL N G +D A +HYI HG E R F A EY+AS+ DL+N
Sbjct: 62 LASNPDLMNWLGADGFTHADATTATKHYIEHGYHEDRTI-TFDAWEYLASNPDLMNWLGA 120
Query: 459 APDL---VQVGKDHFSNFGCEEGRFVTFDSYLYLGS--------YDDLRNVFGSDRGAAA 507
H+ +G E R +TFD+ YL + YD L + AA
Sbjct: 121 DGVTDADAVTAAKHYMQYGVHEDRTITFDAAAYLAANADLQHWIYDLLHLSGDAANDFAA 180
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHED 535
+HYIT+G E R ++ + ++
Sbjct: 181 QHYITNGRFENRMGTPVESYALTTAQDN 208
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 438 DAFKALEYIASHEDLINAFADAPDL---VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + +Y+AS+ DL++ H++N+ EGR +TF+++ YL S D
Sbjct: 8 GSLDSWQYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEYLASNPD 67
Query: 495 LRNVFGSD------RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA---PD 545
L N G+D A +HYI HG E R F A EY+AS+ DL+N
Sbjct: 68 LMNWLGADGFTHADATTATKHYIEHGYHEDRTI-TFDAWEYLASNPDLMNWLGADGVTDA 126
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLTS--------YDDLWNVFGSDRSAAAQHYITH 597
H+ +G E R+ITF+ YL + YD L + AAQHYIT+
Sbjct: 127 DAVTAAKHYMQYGVHEDRTITFDAAAYLAANADLQHWIYDLLHLSGDAANDFAAQHYITN 186
Query: 598 GMKEGRALGI 607
G E R
Sbjct: 187 GRFENRMGTP 196
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 524 FKALEYIASHEDLINAFADA---PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLW 580
+ +Y+AS+ DL++ H++N+ EGR+ITFN YL S DL
Sbjct: 10 LDSWQYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEYLASNPDLM 69
Query: 581 NVFGSDR------SAAAQHYITHGMKEGRALGISGMQF 612
N G+D + A +HYI HG E R + ++
Sbjct: 70 NWLGADGFTHADATTATKHYIEHGYHEDRTITFDAWEY 107
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 9/162 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI----GGYEKNMTIA 263
+ TI D+ D+ TL D N + ++ G ++TI
Sbjct: 807 TANDGGAEGAMTITIADAWTDNTTGFTLDASAVLDTDANLATGGAVITVENGDLADLTI- 865
Query: 264 QHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
Q T + G D + GN+ N+ G DV DG +G+DT + +
Sbjct: 866 QGTQNSDAITDGRGADTINGNAGNDTISAGEGQDVVDGGAGIDTISLTETGVAPLVQVKD 925
Query: 323 ---NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ +I + F S ++ + ++ + I
Sbjct: 926 TVVSDVIAVAHADLITGFASGTDKFNYNGALLNGLGTNADGI 967
Score = 44.0 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE------SMKHFYEFGLSEGRDIT 398
+ + EY AS DL+ +G D + KH+ ++G+ E R IT
Sbjct: 88 HYIEHGYHEDRTITFDAWEYLASNPDLMNWLGADGVTDADAVTAAKHYMQYGVHEDRTIT 147
Query: 399 FDSYLYLGSY-------DDLRNVFG-SDRGAAARHYITHGVKEGR 435
FD+ YL + DL ++ G + AA+HYIT+G E R
Sbjct: 148 FDAAAYLAANADLQHWIYDLLHLSGDAANDFAAQHYITNGRFENR 192
>gi|171916002|ref|ZP_02931472.1| glycosyl transferase, group 1 [Verrucomicrobium spinosum DSM 4136]
Length = 1982
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 80/230 (34%), Gaps = 32/230 (13%)
Query: 381 ESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
++HF + FD+ Y+ Y HY G + +P+
Sbjct: 535 TPLEHFLSDANAWKHRPNGLFDTTWYVAEYL----GKSGKGMIPLLHYCEIGAQLKFSPN 590
Query: 439 A-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY-DDLR 496
+ F Y+ H ++ P V H C + FD+ YL Y +L
Sbjct: 591 SLFDVPWYLGRHPEVAKL----PHSVLEYYLHHLTSECLQPH-PLFDAAWYLEQYAPELE 645
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
A HY+ G + G +P F A Y+ + D++ + H+
Sbjct: 646 -----PGATAFSHYLDRGWRLGFSPHPSFDAKRYLDRNHDVVALGMEP-------LRHYL 693
Query: 556 NFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
FG++EGR+ F+P YL D+ HY+ HG E R
Sbjct: 694 GFGWKEGRAPNAWFDPRDYLQRNPDVAAA----GLEPLTHYVEHGQFEDR 739
Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 80/243 (32%), Gaps = 32/243 (13%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
E Y A Y + G+ + + H+ E G F
Sbjct: 538 EHFLSDANAWKHRPNGLFDTTWYVAEY---LGKSGKGMIPLL-HYCEIGAQLKFSPNSLF 593
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D YLG + ++ + + +Y+ H E P F A Y+ + + A
Sbjct: 594 DVPWYLGRHPEVAKL----PHSVLEYYLHHLTSECLQPHPLFDAAWYLEQYAPELEPGA- 648
Query: 459 APDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
H+ + G G +FD+ YL D+ + RHY+ G K
Sbjct: 649 ------TAFSHYLDRGWRLGFSPHPSFDAKRYLDRNHDVVALG----MEPLRHYLGFGWK 698
Query: 517 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTS 575
EGR P+A F +Y+ + D+ A + H+ G E R + L L
Sbjct: 699 EGRAPNAWFDPRDYLQRNPDVAAAGLEP-------LTHYVEHGQFEDRYRERDSSLALLG 751
Query: 576 YDD 578
+
Sbjct: 752 APE 754
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 65/177 (36%), Gaps = 22/177 (12%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY-DDLRNVFGSDRGAA 422
Y + ++ ++ + + H L FD+ YL Y +L A
Sbjct: 598 YLGRHPEVAKLPHSVLEYYLHHLTSECLQP--HPLFDAAWYLEQYAPELEP-----GATA 650
Query: 423 ARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
HY+ G + G +P F A Y+ + D++ A P H+ FG +EGR
Sbjct: 651 FSHYLDRGWRLGFSPHPSFDAKRYLDRNHDVV-ALGMEP------LRHYLGFGWKEGRAP 703
Query: 482 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
FD YL D+ HY+ HG E R + +L + + E L
Sbjct: 704 NAWFDPRDYLQRNPDVAAAG----LEPLTHYVEHGQFEDRYRERDSSLALLGAPEPL 756
Score = 97.5 bits (241), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 75/232 (32%), Gaps = 35/232 (15%)
Query: 381 ESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYI-THGVKEGRNP 437
+ + + G ++ R FD Y+ Y H++ + R
Sbjct: 498 NPLSDYLQHGTTKKRWPHPLFDGGWYVSKYR-----KQLSSKTPLEHFLSDANAWKHRPN 552
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F Y+A + + H+ G + FD YLG + ++
Sbjct: 553 GLFDTTWYVAEY-------LGKSGKGMIPLLHYCEIGAQLKFSPNSLFDVPWYLGRHPEV 605
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ + +Y+ H E P F A Y+ + + A H+
Sbjct: 606 AKL----PHSVLEYYLHHLTSECLQPHPLFDAAWYLEQYAPELEPGA-------TAFSHY 654
Query: 555 SNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+ G+ G S +F+ YL D+ + +HY+ G KEGRA
Sbjct: 655 LDRGWRLGFSPHPSFDAKRYLDRNHDVVALGME----PLRHYLGFGWKEGRA 702
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 92/299 (30%), Gaps = 68/299 (22%)
Query: 376 GQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G V + + H+ G G FD+ Y +Y R + G G +++ G KE
Sbjct: 418 GFTVKDPVLHYLVIGWKCGLSPHRLFDASWYQKTYR--RELKG---GEPLTNFLIEGWKE 472
Query: 434 GRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLG 490
R P+ F Y+ +++ I + + G + R+ FD Y+
Sbjct: 473 MRLPNCLFHTSWYMKRYQEEIPEGQNP-------LSDYLQHGTTKKRWPHPLFDGGWYVS 525
Query: 491 SYDDLRNVFGSDRGAAARHYIT--HGVKEGRNPDAFKALEYIASHE-------------- 534
Y H+++ + K R F Y+A +
Sbjct: 526 KYR-----KQLSSKTPLEHFLSDANAWKH-RPNGLFDTTWYVAEYLGKSGKGMIPLLHYC 579
Query: 535 --------------DLINAFADAPDLVQ---AGKDHFSNFGYEE--GRSITFNPDLYLTS 575
D+ P++ + + +++ + E F+ YL
Sbjct: 580 EIGAQLKFSPNSLFDVPWYLGRHPEVAKLPHSVLEYYLHHLTSECLQPHPLFDAAWYLEQ 639
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDH 634
Y + A HY+ G + G + F + L R+ ++L +
Sbjct: 640 YAP----ELEPGATAFSHYLDRGWRLGFS---PHPSFDAKRYL---DRNHDVVALGMEP 688
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 35/209 (16%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 456
FD+ Y + G HY+ G K G +P F A Y ++ +
Sbjct: 405 VFDAEYYQSQLPE-----GFTVKDPVLHYLVIGWKCGLSPHRLFDASWYQKTYRRELKGG 459
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+F G +E R F + Y+ Y + + Y+ HG
Sbjct: 460 EP--------LTNFLIEGWKEMRLPNCLFHTSWYMKRYQEEIP----EGQNPLSDYLQHG 507
Query: 515 VKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDL 571
+ R P F Y++ + +++ + +HF + F+
Sbjct: 508 TTKKRWPHPLFDGGWYVSKYRKQLSS--------KTPLEHFLSDANAWKHRPNGLFDTTW 559
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
Y+ Y G HY G +
Sbjct: 560 YVAEY---LGKSGKGMI-PLLHYCEIGAQ 584
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 30/165 (18%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDD 494
F A Y + + V+ H+ G + G FD+ Y +Y
Sbjct: 403 SGVFDAEYYQSQLPE--------GFTVKDPVLHYLVIGWKCGLSPHRLFDASWYQKTYR- 453
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
R + G + +++ G KE R P+ F Y+ +++ I P+ D
Sbjct: 454 -RELKGGE---PLTNFLIEGWKEMRLPNCLFHTSWYMKRYQEEI------PEGQNPLSD- 502
Query: 554 FSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
+ G + R F+ Y++ Y +H+++
Sbjct: 503 YLQHGTTKKRWPHPLFDGGWYVSKYRK-----QLSSKTPLEHFLS 542
>gi|320544348|ref|NP_001189002.1| matrix metalloproteinase 1, isoform H [Drosophila melanogaster]
gi|318068688|gb|ADV37248.1| matrix metalloproteinase 1, isoform H [Drosophila melanogaster]
Length = 554
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 98/270 (36%), Gaps = 44/270 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 277 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 328
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y L ++ W G N+ A
Sbjct: 329 TDSVEEGYPQLISKGWP---GLPGNIDAAF 355
>gi|323135550|ref|ZP_08070633.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322398641|gb|EFY01160.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 906
Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 84/228 (36%), Gaps = 59/228 (25%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y+ +Y D+ A HY G + GR+P A F EY+ ++ D+ A
Sbjct: 26 FDAQFYVSAYPDV----ADSSIDPAEHYFVVGWRHGRDPCAWFSTEEYLKANGDVAEADV 81
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ H+ G EEGR V + + RG AA H + G +
Sbjct: 82 NP-------FYHYLTHGREEGRVV-------------VASRLSDSRGGAASH--SAGTES 119
Query: 518 GRNP--------------------DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
R P AF Y +++ DL P DHF+
Sbjct: 120 SRRPPEGAPGMSEDVLAQQRSVVAGAFDTNFYRSTYPDL------HPLNDDQLVDHFNEH 173
Query: 558 GYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
G+ E R F+ + YL Y D+ G HY+ +G +EGR
Sbjct: 174 GWREHRDPCPWFSTNYYLKRYPDI----GRSSINPLYHYLAYGQREGR 217
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 47/168 (27%), Gaps = 61/168 (36%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------------------------ 398
EY + D+ + H+ G EGR +
Sbjct: 68 EYLKANGDVAEA----DVNPFYHYLTHGREEGRVVVASRLSDSRGGAASHSAGTESSRRP 123
Query: 399 ----------------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
FD+ Y +Y DL + H+ HG +E R+
Sbjct: 124 PEGAPGMSEDVLAQQRSVVAGAFDTNFYRSTYPDL---HPLNDDQLVDHFNEHGWREHRD 180
Query: 437 PDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
P F Y+ + D+ + + H+ +G EGR +
Sbjct: 181 PCPWFSTNYYLKRYPDIGRSSINP-------LYHYLAYGQREGRLPDY 221
>gi|323139972|ref|ZP_08074990.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322394772|gb|EFX97355.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 984
Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats.
Identities = 64/328 (19%), Positives = 110/328 (33%), Gaps = 93/328 (28%)
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+LS ER RF Y +Y D+ + +++H+ FG EGR+
Sbjct: 7 WLSKTERHRFD---------SLFDSEHYIRTYPDVREA----NITAVEHYQNFGWIEGRN 53
Query: 397 IT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA------------ 442
+ F++ YL +Y+D HY G ++ R +
Sbjct: 54 PSDAFNTIWYLSAYEDAAR----SGLNPLIHYARFGYRDSRPIAPGETVAGSWLADAANN 109
Query: 443 -------LEYIASHEDLINAFADAPDLVQVGKD--------HFSNFGCEEGRFVT--FDS 485
+ S+ + N+ PD + D ++ G E R FD+
Sbjct: 110 ELLPNEMRAFARSYVVIQNSSLFDPDFYRQQYDVKARDLIENYIRQGRRERRDPGPSFDA 169
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP------------------------ 521
YL +YDD+R + H++ +G EGR
Sbjct: 170 SWYLENYDDVR----DNGVDPFIHFLEYGAAEGRITGPKAVAAHSTIPEQSHAALAPNEL 225
Query: 522 ----DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTS 575
+ F A Y ++D+ + +HF+ G+ EGR + F+ YL
Sbjct: 226 ERLLEGFDAGFYRRKNKDVDFSKISP-------LEHFATIGWREGRDPSADFSVKGYLHY 278
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ G H++ G++E R
Sbjct: 279 NPDV----GLAGINPFLHFLIRGIEEKR 302
Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 35/221 (15%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLIN 454
D FDS Y+ +Y D+R A HY G EGRNP DAF + Y++++ED
Sbjct: 17 DSLFDSEHYIRTYPDVREA----NITAVEHYQNFGWIEGRNPSDAFNTIWYLSAYEDAAR 72
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN--VFGSDRGAAARHYIT 512
+ + H++ FG + R + + D N + ++ A AR Y+
Sbjct: 73 SGLNP-------LIHYARFGYRDSRPIAPGETVAGSWLADAANNELLPNEMRAFARSYVV 125
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPD 570
+N F Y ++ + + G E R +F+
Sbjct: 126 I-----QNSSLFDPDFYRQQYDVKARDLIEN----------YIRQGRRERRDPGPSFDAS 170
Query: 571 LYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
YL +YDD+ + H++ +G EGR G +
Sbjct: 171 WYLENYDDVR----DNGVDPFIHFLEYGAAEGRITGPKAVA 207
Score = 104 bits (258), Expect = 6e-20, Method: Composition-based stats.
Identities = 72/416 (17%), Positives = 124/416 (29%), Gaps = 113/416 (27%)
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F++ + + ++ ++ VE + + + Y ++YED +
Sbjct: 20 FDSEHYIRTYPDVREANITAVEHYQNFGWIEGRNPSDAFNTIWYLSAYED----AARSGL 75
Query: 381 ESMKHFYEFGLSEGR--------------------------------------DITFDSY 402
+ H+ FG + R FD
Sbjct: 76 NPLIHYARFGYRDSRPIAPGETVAGSWLADAANNELLPNEMRAFARSYVVIQNSSLFDPD 135
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 461
Y Y D++ +YI G +E R+P F A Y+ +++D+ + D
Sbjct: 136 FYRQQY-DVKA------RDLIENYIRQGRRERRDPGPSFDASWYLENYDDVRDNGVDP-- 186
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDS-----------YLYLGSYDDLRNVFGSDRG------ 504
HF +G EGR + + L + R + G D G
Sbjct: 187 -----FIHFLEYGAAEGRITGPKAVAAHSTIPEQSHAALAPNELERLLEGFDAGFYRRKN 241
Query: 505 --------AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ H+ T G +EGR+P A F Y+ + D+ A + HF
Sbjct: 242 KDVDFSKISPLEHFATIGWREGRDPSADFSVKGYLHYNPDVGLAGINP-------FLHFL 294
Query: 556 NFGYEEGR--------SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
G EE R + Y ++W G D EGR +
Sbjct: 295 IRGIEEKRIWRPLDRTPQPADGVSEWRGYGEVWARSGEDL-------------EGREPDV 341
Query: 608 SGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG-NYYDSDLYSMHDINH 662
+ F SV+ + A L K+ D+ N + + I
Sbjct: 342 HALNFVSVLRGLALDKIVASLDF-GAPKRDDIRVSIIIPCLNEELVTVECLQSIER 396
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F + YI ++ D+ A +H+ NFG+ EGR+ + FN YL++Y
Sbjct: 15 RFDSLFDSEHYIRTYPDVREANI-------TAVEHYQNFGWIEGRNPSDAFNTIWYLSAY 67
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
+D HY G ++ R +
Sbjct: 68 EDAAR----SGLNPLIHYARFGYRDSRPIAP 94
>gi|195027856|ref|XP_001986798.1| GH21566 [Drosophila grimshawi]
gi|193902798|gb|EDW01665.1| GH21566 [Drosophila grimshawi]
Length = 587
Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats.
Identities = 64/264 (24%), Positives = 98/264 (37%), Gaps = 42/264 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+AR A WS+ DLTF +
Sbjct: 112 YALQGSRWRVKNLTYKISKYPKRLKRNDVDA------EIAR-AFAVWSEDTDLTFTRKTS 164
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 165 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 224
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + S +
Sbjct: 225 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTSQLTP 279
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE--VQQKDSPFIQTIYDSGGDDLLDL 233
+ + T + Y PK L ++I K +SP +T Y GD L
Sbjct: 280 TNAFPPT-------THRPSYTPPKVPLDDSICKDSKIDTLFNSPTGET-YAFKGDKYYKL 331
Query: 234 TLIGGVKNYIDLNTESWSSIGGYE 257
T Y L ++ W + G
Sbjct: 332 TTDSVEDGYPKLISKGWPGLPGNI 355
>gi|320544350|ref|NP_001189003.1| matrix metalloproteinase 1, isoform I [Drosophila melanogaster]
gi|320544354|ref|NP_001189005.1| matrix metalloproteinase 1, isoform K [Drosophila melanogaster]
gi|318068689|gb|ADV37249.1| matrix metalloproteinase 1, isoform I [Drosophila melanogaster]
gi|318068691|gb|ADV37251.1| matrix metalloproteinase 1, isoform K [Drosophila melanogaster]
Length = 528
Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 98/270 (36%), Gaps = 44/270 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 277 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 328
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y L ++ W G N+ A
Sbjct: 329 TDSVEEGYPQLISKGWP---GLPGNIDAAF 355
>gi|206597316|gb|ACI15752.1| FI01410p [Drosophila melanogaster]
Length = 613
Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 98/270 (36%), Gaps = 44/270 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 138 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 190
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 191 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 250
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 251 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 305
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 306 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 357
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y L ++ W G N+ A
Sbjct: 358 TDSVEEGYPQLISKGWP---GLPGNIDAAF 384
>gi|195353242|ref|XP_002043114.1| GM11800 [Drosophila sechellia]
gi|194127202|gb|EDW49245.1| GM11800 [Drosophila sechellia]
Length = 610
Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 98/270 (36%), Gaps = 44/270 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 135 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 187
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 188 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGTPRGTNLFQV 247
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 248 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 302
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 303 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 354
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y L ++ W G N+ A
Sbjct: 355 TDSVEEGYPQLISKGWP---GLPGNIDAAF 381
>gi|195586513|ref|XP_002083018.1| GD24926 [Drosophila simulans]
gi|194195027|gb|EDX08603.1| GD24926 [Drosophila simulans]
Length = 536
Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 96/263 (36%), Gaps = 41/263 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 138 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 190
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 191 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGTPRGTNLFQV 250
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 251 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 305
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 306 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 357
Query: 235 LIGGVKNYIDLNTESWSSIGGYE 257
+ Y L ++ W + G
Sbjct: 358 TDSVEEGYPQLISKGWPGLPGNI 380
>gi|195489771|ref|XP_002092878.1| GE11424 [Drosophila yakuba]
gi|194178979|gb|EDW92590.1| GE11424 [Drosophila yakuba]
Length = 586
Score = 117 bits (292), Expect = 8e-24, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 97/270 (35%), Gaps = 44/270 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSAALMAPFYRGFEPVFKLD-----DDDKAAIQSLYGRKTNQLRP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 277 TNVYPAT--------TQRPYTPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 328
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y L ++ W G N+ A
Sbjct: 329 TDSVEEGYPQLISKGWP---GLPGNIDAAF 355
>gi|221468755|ref|NP_726473.2| matrix metalloproteinase 1, isoform C [Drosophila melanogaster]
gi|21392160|gb|AAM48434.1| RE62222p [Drosophila melanogaster]
gi|60677889|gb|AAX33451.1| RE19818p [Drosophila melanogaster]
gi|220902386|gb|AAF47255.3| matrix metalloproteinase 1, isoform C [Drosophila melanogaster]
Length = 584
Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 96/263 (36%), Gaps = 41/263 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 277 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 328
Query: 235 LIGGVKNYIDLNTESWSSIGGYE 257
+ Y L ++ W + G
Sbjct: 329 TDSVEEGYPQLISKGWPGLPGNI 351
>gi|284515810|gb|ADB91412.1| MIP15906p [Drosophila melanogaster]
Length = 541
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 98/270 (36%), Gaps = 44/270 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 138 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 190
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 191 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 250
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 251 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 305
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 306 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 357
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y L ++ W G N+ A
Sbjct: 358 TDSVEEGYPQLISKGWP---GLPGNIDAAF 384
>gi|320544352|ref|NP_001189004.1| matrix metalloproteinase 1, isoform J [Drosophila melanogaster]
gi|318068690|gb|ADV37250.1| matrix metalloproteinase 1, isoform J [Drosophila melanogaster]
Length = 512
Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 98/270 (36%), Gaps = 44/270 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 277 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 328
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y L ++ W G N+ A
Sbjct: 329 TDSVEEGYPQLISKGWP---GLPGNIDAAF 355
>gi|254474557|ref|ZP_05087943.1| hypothetical protein RR11_392 [Ruegeria sp. R11]
gi|214028800|gb|EEB69635.1| hypothetical protein RR11_392 [Ruegeria sp. R11]
Length = 412
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 62/332 (18%), Positives = 100/332 (30%), Gaps = 41/332 (12%)
Query: 32 PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF----ISSNNG 87
PDV + + Q A+ ++ + + F E S I S +G
Sbjct: 44 PDVTQDPVGATGYWSFDATQQARAQAVFDQYEAIAGVRFVEVDGPSMINIYGFDGGSADG 103
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
Y S Y + + GT +HE+GHALGL H
Sbjct: 104 YANIAYSGSGYTGSGALTSGET---DLTPGTYGHVVMMHELGHALGLQHSHD-------G 153
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
+ + D +VM+Y D Y DI A+Q +YG G I
Sbjct: 154 SLTLEPTWDRPDLTVMTYNHAPD--------YVTELGTFDIQAMQHLYGTSDSFDGWEIV 205
Query: 208 KIEVQQK------------DSPFIQTIYDSGGDDLLDLT----LIGGVKNYIDLNTESWS 251
+ + T+ GG D + ++ G L
Sbjct: 206 GGGSSRIIIRGSADGDRMMGTDQSTTLNGRGGHDHIQGREADDILRGSGGRDTLVGGLGD 265
Query: 252 S--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
IGG ++ I + G ND + G + +G D G +G DT
Sbjct: 266 DRLIGGQGYDVLIG-GLTDDGHSGGPDNDTMYGQRGYDRLEGGAGRDRLFGGNGRDTLVG 324
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ + + A+ + D ++D
Sbjct: 325 GDGADTLNGGFGADTFVFDHADMGETDHITDF 356
>gi|11228711|gb|AAG33131.1|AF271666_1 matrix metalloproteinase 1 [Drosophila melanogaster]
Length = 567
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 96/263 (36%), Gaps = 41/263 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 135 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 187
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 188 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 247
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 248 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 302
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 303 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 354
Query: 235 LIGGVKNYIDLNTESWSSIGGYE 257
+ Y L ++ W + G
Sbjct: 355 TDSVEEGYPQLISKGWPGLPGNI 377
>gi|254500886|ref|ZP_05113037.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
DFL-11]
gi|222436957|gb|EEE43636.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
DFL-11]
Length = 1702
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G+A H+ G +EGR+P+A F Y+ + D+ A + DH++ G EG
Sbjct: 11 GSAEEHFNLFGFQEGRDPNAHFDTSFYLGQNPDVAAAGVNP-------FDHYNLLGESEG 63
Query: 479 RFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA---------FKAL 527
R FD Y Y D+ + H+I G EGR+P+A F
Sbjct: 64 RSPNSLFDPVFYAEQYPDVAAAG----VSLFEHFINFGASEGRSPNASIASQLESGFDTE 119
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
Y+A++ D+ A + L + +H+ FG++E RS N + + S D G +
Sbjct: 120 AYLAANPDVAAAIENG--LFASAYEHWGLFGFKEDRSGAQNTNGDVISIGD--GAPGDNP 175
Query: 588 SAA 590
AA
Sbjct: 176 DAA 178
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 65/165 (39%), Gaps = 26/165 (15%)
Query: 371 LIQVIGQDVFESMK-HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ I V S + HF FG EGRD FD+ YLG D+ HY
Sbjct: 1 MAAAIEAGVIGSAEEHFNLFGFQEGRDPNAHFDTSFYLGQNPDVAAA----GVNPFDHYN 56
Query: 428 THGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV----- 481
G EGR+P++ F + Y + D+ A +HF NFG EGR
Sbjct: 57 LLGESEGRSPNSLFDPVFYAEQYPDVAAAG-------VSLFEHFINFGASEGRSPNASIA 109
Query: 482 -----TFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRN 520
FD+ YL + D+ + A A H+ G KE R+
Sbjct: 110 SQLESGFDTEAYLAANPDVAAAIENGLFASAYEHWGLFGFKEDRS 154
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 25/164 (15%)
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A A ++ ++HF+ FG +EGR FD+ YLG D+ HY
Sbjct: 2 AAAIEAGVIGSAEEHFNLFGFQEGRDPNAHFDTSFYLGQNPDVAAAG----VNPFDHYNL 57
Query: 513 HGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT----- 566
G EGR+P+ F + Y + D+ A + +HF NFG EGRS
Sbjct: 58 LGESEGRSPNSLFDPVFYAEQYPDVAAAGV-------SLFEHFINFGASEGRSPNASIAS 110
Query: 567 -----FNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRA 604
F+ + YL + D+ + A A +H+ G KE R+
Sbjct: 111 QLESGFDTEAYLAANPDVAAAIENGLFASAYEHWGLFGFKEDRS 154
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 57/176 (32%), Gaps = 23/176 (13%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
E Y D+ H+ G SEGR F
Sbjct: 15 EHFNLFGFQEGRDPNAHFDTSFYLGQNPDVAAA----GVNPFDHYNLLGESEGRSPNSLF 70
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA---------FKALEYIASHE 450
D Y Y D+ + H+I G EGR+P+A F Y+A++
Sbjct: 71 DPVFYAEQYPDVAAA----GVSLFEHFINFGASEGRSPNASIASQLESGFDTEAYLAANP 126
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
D+ A + L +H+ FG +E R ++ + S D G + AA
Sbjct: 127 DVAAAIENG--LFASAYEHWGLFGFKEDRSGAQNTNGDVISIGD--GAPGDNPDAA 178
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 24/152 (15%)
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ G+A H+ G +EGR+P+A F Y+ + D+ A + DH+
Sbjct: 3 AAIEAGVIGSAEEHFNLFGFQEGRDPNAHFDTSFYLGQNPDVAAAGVNP-------FDHY 55
Query: 555 SNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA-------- 604
+ G EGRS F+P Y Y D+ + +H+I G EGR+
Sbjct: 56 NLLGESEGRSPNSLFDPVFYAEQYPDVAAA----GVSLFEHFINFGASEGRSPNASIASQ 111
Query: 605 --LGISGMQFKSVMNLSEKSRDKADLSLSFDH 634
G + + + + + +++H
Sbjct: 112 LESGFDTEAYLAANPDVAAAIENGLFASAYEH 143
>gi|221468756|ref|NP_523852.3| matrix metalloproteinase 1, isoform D [Drosophila melanogaster]
gi|320544344|ref|NP_001189000.1| matrix metalloproteinase 1, isoform F [Drosophila melanogaster]
gi|320544346|ref|NP_001189001.1| matrix metalloproteinase 1, isoform G [Drosophila melanogaster]
gi|220902387|gb|AAM68327.2| matrix metalloproteinase 1, isoform D [Drosophila melanogaster]
gi|318068686|gb|ADV37246.1| matrix metalloproteinase 1, isoform F [Drosophila melanogaster]
gi|318068687|gb|ADV37247.1| matrix metalloproteinase 1, isoform G [Drosophila melanogaster]
Length = 541
Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 96/263 (36%), Gaps = 41/263 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 277 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 328
Query: 235 LIGGVKNYIDLNTESWSSIGGYE 257
+ Y L ++ W + G
Sbjct: 329 TDSVEEGYPQLISKGWPGLPGNI 351
>gi|163796443|ref|ZP_02190403.1| type I secretion target repeat protein [alpha proteobacterium
BAL199]
gi|159178293|gb|EDP62837.1| type I secretion target repeat protein [alpha proteobacterium
BAL199]
Length = 565
Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D F Y Y+ SY D+ + + + A H I G EGR F LEY+AS+ DL+ A
Sbjct: 264 DPEFSGYEYVASYGDIESAYAGNPAGARSHLINSGAYEGREV-TFDGLEYVASYSDLMAA 322
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
H+ N G EGR TFD YL +Y DLR VFG++ AA RHYI+ G
Sbjct: 323 LGTD---RAAAATHYMNSGRYEGRSTTFDGESYLAAYADLRGVFGNNVAAATRHYISSGY 379
Query: 516 KEGRNP 521
EGR+P
Sbjct: 380 AEGRSP 385
Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD--SYLYLGSYDDLRNVFGSDRGA 505
S+ D N + Q G ++ GR++ + Y Y+ SY D+ + + +
Sbjct: 235 SNPDPANGTSRYYLFNQEGSLNYFL-----GRYLDPEFSGYEYVASYGDIESAYAGNPAG 289
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
A H I G EGR F LEY+AS+ DL+ A A H+ N G EGRS
Sbjct: 290 ARSHLINSGAYEGREV-TFDGLEYVASYSDLMAALGTDR---AAAATHYMNSGRYEGRST 345
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
TF+ + YL +Y DL VFG++ +AA +HYI+ G EGR+
Sbjct: 346 TFDGESYLAAYADLRGVFGNNVAAATRHYISSGYAEGRS 384
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ S EY ASY D+ + + H G EGR++TFD Y+ SY DL
Sbjct: 264 DPEFSGYEYVASYGDIESAYAGNPAGARSHLINSGAYEGREVTFDGLEYVASYSDLMAAL 323
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G+DR AAA HY+ G EGR+ F Y+A++ DL F + V H+ + G
Sbjct: 324 GTDRAAAATHYMNSGRYEGRS-TTFDGESYLAAYADLRGVFGNN---VAAATRHYISSGY 379
Query: 476 EEGRFV 481
EGR
Sbjct: 380 AEGRSP 385
Score = 79.8 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF 583
F EY+AS+ D+ +A+A P ++ H N G EGR +TF+ Y+ SY DL
Sbjct: 267 FSGYEYVASYGDIESAYAGNPAGARS---HLINSGAYEGREVTFDGLEYVASYSDLMAAL 323
Query: 584 GSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
G+DR+AAA HY+ G EGR+ G + +
Sbjct: 324 GTDRAAAATHYMNSGRYEGRSTTFDGESYLAAY 356
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 539 AFADAPDLVQAGKDHFS-----NFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSDRSAAA 591
A PD ++ + Y GR F+ Y+ SY D+ + + + + A
Sbjct: 232 ATLSNPDPANGTSRYYLFNQEGSLNYFLGRYLDPEFSGYEYVASYGDIESAYAGNPAGAR 291
Query: 592 QHYITHGMKEGRALGISGMQFKSVMN 617
H I G EGR + G+++ + +
Sbjct: 292 SHLINSGAYEGREVTFDGLEYVASYS 317
>gi|320544342|ref|NP_001188999.1| matrix metalloproteinase 1, isoform E [Drosophila melanogaster]
gi|318068685|gb|ADV37245.1| matrix metalloproteinase 1, isoform E [Drosophila melanogaster]
Length = 542
Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 96/263 (36%), Gaps = 41/263 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLRP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 277 TNVYPAT--------TQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 328
Query: 235 LIGGVKNYIDLNTESWSSIGGYE 257
+ Y L ++ W + G
Sbjct: 329 TDSVEEGYPQLISKGWPGLPGNI 351
>gi|58040664|ref|YP_192628.1| putative glycosyl transferase [Gluconobacter oxydans 621H]
gi|58003078|gb|AAW61972.1| Putative glycosyl transferase [Gluconobacter oxydans 621H]
Length = 1030
Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 80/243 (32%), Gaps = 17/243 (6%)
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR-GAAARHYIT 428
+ +H+ G G FD YL D+R + HY
Sbjct: 45 AGELDLSDEGLEQHWKRKGARAGLSPNRFFDEEWYLRQNPDVREGISLGIFDSGFLHYCE 104
Query: 429 HGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDS 485
G + R+P F Y + + DL + G DH+ G +E R V FD
Sbjct: 105 SGFR-SRSPHWLFSEENYFSCNPDLSPHVLASQGFCN-GYDHYLAIGDQEHRKSHVFFDP 162
Query: 486 YLYLGSYDDLRN--VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
++ + R F A + G + R+ F Y+ + D+++A
Sbjct: 163 EVFRAASMAERKHYDFAIGDFAQFIRFSVAGRR--RSSWYFDPQWYLERYPDVVDALESG 220
Query: 544 PDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMK 600
Q+ H+ G F+ Y Y D+ N+ +H+I G+
Sbjct: 221 --RFQSPLHHYLTNGNPTAYDPNPWFSEAFYAAQYPDVGNIVAHGGFRNGYEHFIRFGIT 278
Query: 601 EGR 603
E R
Sbjct: 279 EKR 281
Score = 91.3 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 71/218 (32%), Gaps = 24/218 (11%)
Query: 399 FDSYLYLGSY-DDLRNVFGSDRGAAA---------RHYITHGVKEGRNPDAF-KALEYIA 447
FD+ Y Y LR A +H+ G + G +P+ F Y+
Sbjct: 22 FDAEWYRTRYGLRLREEAKESGEAGELDLSDEGLEQHWKRKGARAGLSPNRFFDEEWYLR 81
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDLRNVFGSDRG- 504
+ D+ + + G H+ G R + Y DL + +G
Sbjct: 82 QNPDVREGISLG--IFDSGFLHYCESGFR-SRSPHWLFSEENYFSCNPDLSPHVLASQGF 138
Query: 505 -AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
HY+ G +E R F E + A D F F R
Sbjct: 139 CNGYDHYLAIGDQEHRKSHVFFDPEVFRA---ASMAERKHYDFAIGDFAQFIRFSVAGRR 195
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHG 598
+ F+P YL Y D+ + S R + HY+T+G
Sbjct: 196 RSSWYFDPQWYLERYPDVVDALESGRFQSPLHHYLTNG 233
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 61/235 (25%), Gaps = 54/235 (22%)
Query: 364 YTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRG 420
Y D+ + I +F+ H+ E G R F Y DL + +G
Sbjct: 79 YLRQNPDVREGISLGIFDSGFLHYCESGFR-SRSPHWLFSEENYFSCNPDLSPHVLASQG 137
Query: 421 --AAARHYITHGVKEGRNPDAF-------------------------------------- 440
HY+ G +E R F
Sbjct: 138 FCNGYDHYLAIGDQEHRKSHVFFDPEVFRAASMAERKHYDFAIGDFAQFIRFSVAGRRRS 197
Query: 441 ----KALEYIASHEDLINAFADAPDLVQVGKDHFSNFG--CEEGRFVTFDSYLYLGSYDD 494
Y+ + D+++A Q H+ G F Y Y D
Sbjct: 198 SWYFDPQWYLERYPDVVDALESG--RFQSPLHHYLTNGNPTAYDPNPWFSEAFYAAQYPD 255
Query: 495 LRNVFG-SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ N+ H+I G+ E R P A L S PD+
Sbjct: 256 VGNIVAHGGFRNGYEHFIRFGITEKRQPQAGVDLAAFLSQSG-TQRLLRRPDITD 309
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 61/186 (32%), Gaps = 24/186 (12%)
Query: 467 KDHFSNFGCEEGR----FVTFDSYLYLGSYDDLRNVFGSDRGAA----------ARHYIT 512
KDH G + FD+ Y Y + G A +H+
Sbjct: 2 KDHILASPAFAGDRPPLWAAFDAEWYRTRYGLRLREEAKESGEAGELDLSDEGLEQHWKR 61
Query: 513 HGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNP 569
G + G +P+ F Y+ + D+ + + +G H+ G+ RS F+
Sbjct: 62 KGARAGLSPNRFFDEEWYLRQNPDVREGISLG--IFDSGFLHYCESGFR-SRSPHWLFSE 118
Query: 570 DLYLTSYDDLWNVFGSDRS--AAAQHYITHGMKEGRALG--ISGMQFKSVMNLSEKSRDK 625
+ Y + DL + + HY+ G +E R F++ K D
Sbjct: 119 ENYFSCNPDLSPHVLASQGFCNGYDHYLAIGDQEHRKSHVFFDPEVFRAASMAERKHYDF 178
Query: 626 ADLSLS 631
A +
Sbjct: 179 AIGDFA 184
>gi|291570678|dbj|BAI92950.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 300
Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 23/242 (9%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y+A ++++ A AD L + +HFS +G EGR FDS YL +++
Sbjct: 8 FDEGFYLAQNQEVEEAIADG--LFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPHIQS 65
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
AA H++ G + R+P+ F + Y+ + + A +HF
Sbjct: 66 EVEEGITTAAAHFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVAKGEF---TAFEHFLK 122
Query: 557 FGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGRALGISGMQ-- 611
G +G S +FN + Y D + + +H+ G++ GR +
Sbjct: 123 IGQFQGLDPSESFNTEFYRDRNFDAVEGIEDEIIGSLFEHFYRFGLELGRLGAPPQLMDD 182
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLYTD----------YFGDGNYYDSDLYSMHDIN 661
+ + L + ++ D V++Y F G D+++ + DIN
Sbjct: 183 LSNAIALDTLLGSRTIVNSVTDDNPVNIYEFIIPNNGSEFSLFLHGLKADANVDLIQDIN 242
Query: 662 HD 663
+
Sbjct: 243 QN 244
Score = 98.7 bits (244), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 13/181 (7%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y A +++ + I +FE + +HF +G EGR+ FDS YL +++
Sbjct: 6 TLFDEGFYLAQNQEVEEAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPHIQS 65
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
AA H++ G + R+P+ F + Y+ + + A +HF
Sbjct: 66 EVEEGITTAAAHFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVAKGEF---TAFEHFLK 122
Query: 473 FGCEEGRFV--TFDSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGR---NPDAFKA 526
G +G +F++ Y D + + G+ H+ G++ GR P
Sbjct: 123 IGQFQGLDPSESFNTEFYRDRNFDAVEGIEDEIIGSLFEHFYRFGLELGRLGAPPQLMDD 182
Query: 527 L 527
L
Sbjct: 183 L 183
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 10/165 (6%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-- 398
E Q Y A + + + + + HF G ++ R
Sbjct: 33 FEHFSRYGQFEGRNPNPIFDSEYYLAQNPHIQSEVEEGITTAAAHFVNIGQTDNRSPNPF 92
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD YL + A H++ G +G +P +F Y + D +
Sbjct: 93 FDPVFYLQQNPTVSQGVAKGEFTAFEHFLKIGQFQGLDPSESFNTEFYRDRNFDAVEGIE 152
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
D +++ +HF FG E GR + DDL N D
Sbjct: 153 D--EIIGSLFEHFYRFGLELGRLGAPPQLM-----DDLSNAIALD 190
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+A ++++ A AD L + +HFS +G EGR+ F+ + YL +
Sbjct: 7 LFDEGFYLAQNQEVEEAIADG--LFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPHIQ 64
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
+ + AA H++ G + R+ F V L +
Sbjct: 65 SEVEEGITTAAAHFVNIGQTDNRS---PNPFFDPVFYLQQN 102
>gi|291518564|emb|CBK73785.1| Bacterial surface proteins containing Ig-like domains [Butyrivibrio
fibrisolvens 16/4]
Length = 615
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-----------AFKALEY 529
FD+ Y D+ FGS A HY G EGR F A Y
Sbjct: 28 AAFDADYYAKQNPDVVAAFGSSAKALENHYNLFGKNEGRAGSSEDLKNSPLRQLFDASFY 87
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDR 587
+ D++ AF + D A HF FG +EGR I F+ Y +Y DL FG +
Sbjct: 88 AKQNPDVVAAFGNNED---ALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFGDNM 144
Query: 588 SAAAQHYITHGMKEGRAL-GISGMQFKSVMNLSEKSRDKADL 628
+H++ +G KE R L G + + A
Sbjct: 145 ELYYKHFVAYGQKEHRTLGGFPSENILPSGKTAVATASAAKT 186
Score = 104 bits (258), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 16/146 (10%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD------------I 397
+ Y D++ G H+ FG +EGR
Sbjct: 21 STSAPAYAAFDADYYAKQNPDVVAAFGSSAKALENHYNLFGKNEGRAGSSEDLKNSPLRQ 80
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y D+ FG++ A +H++ G+KEGR + F Y A++ DL F
Sbjct: 81 LFDASFYAKQNPDVVAAFGNNEDALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKF 140
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT 482
D +L HF +G +E R +
Sbjct: 141 GDNMELY---YKHFVAYGQKEHRTLG 163
Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT------------FDSY 486
AF A Y + D++ AF + ++ +H++ FG EGR + FD+
Sbjct: 29 AFDADYYAKQNPDVVAAFGSSAKALE---NHYNLFGKNEGRAGSSEDLKNSPLRQLFDAS 85
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 545
Y D+ FG++ A +H++ G+KEGR + F Y A++ DL F D +
Sbjct: 86 FYAKQNPDVVAAFGNNEDALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFGDNME 145
Query: 546 LVQAGKDHFSNFGYEEGRSI 565
L HF +G +E R++
Sbjct: 146 LY---YKHFVAYGQKEHRTL 162
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y D++ G + +HF FG+ EGR I FD Y +Y DL FG
Sbjct: 82 FDASFYAKQNPDVVAAFGNNEDALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFG 141
Query: 417 SDRGAAARHYITHGVKEGRNPDAF 440
+ +H++ +G KE R F
Sbjct: 142 DNMELYYKHFVAYGQKEHRTLGGF 165
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKS- 622
F+ D Y D+ FGS A HY G EGRA ++ + L + S
Sbjct: 27 YAAFDADYYAKQNPDVVAAFGSSAKALENHYNLFGKNEGRAGSSEDLKNSPLRQLFDASF 86
Query: 623 --RDKADLSLSFDHKKVDLYTDYFGDG 647
+ D+ +F + + L+ + G
Sbjct: 87 YAKQNPDVVAAFGNNEDALFQHFLIFG 113
>gi|195120101|ref|XP_002004567.1| GI19538 [Drosophila mojavensis]
gi|193909635|gb|EDW08502.1| GI19538 [Drosophila mojavensis]
Length = 588
Score = 114 bits (284), Expect = 6e-23, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 96/267 (35%), Gaps = 40/267 (14%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
R + L+ W + YK D+ E+AR A WS+ DLTF
Sbjct: 108 RAKRYALQGSRWRVKNLTYKISKYPKRLKRNDVDA------EIAR-AFAVWSEDTDLTFT 160
Query: 72 ETSI---HSDIKFISSN---------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+ H +IKF+ S G + + + +FD A++W G +GT
Sbjct: 161 RKTSGPVHIEIKFVESEHGDGDPFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTN 220
Query: 120 LSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
L A HE GH+LGL H Y G PV+ +D D + ++ S + + +
Sbjct: 221 LFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTN 275
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDL 230
+ Y + + Y PK L ++I K + GD
Sbjct: 276 QYTPTNAYPPS-------THRPSYTPPKVPLDDSICKDSKIDTLFNSAHGETFAFKGDKY 328
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYE 257
LT + Y L ++ W + G
Sbjct: 329 YKLTTDSVEEGYPQLISKGWPGLPGNI 355
>gi|89054048|ref|YP_509499.1| hypothetical protein Jann_1557 [Jannaschia sp. CCS1]
gi|88863597|gb|ABD54474.1| hypothetical protein Jann_1557 [Jannaschia sp. CCS1]
Length = 681
Score = 114 bits (284), Expect = 6e-23, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 95/261 (36%), Gaps = 38/261 (14%)
Query: 71 EETSIHSDIKFISSNN------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
+ SDI + + P R + N ++ G+
Sbjct: 85 VAIAQGSDINLTWDDANALFSSPNTWALAFFPQPGSLPRGEIYFNSRSDLNYQSSYAPGS 144
Query: 119 ILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
LHE+GHALGL HP G G P + + D + +VMSY + +
Sbjct: 145 QGFFVPLHEVGHALGLKHPFDDGGTGRPNFESLGLGKFDLDMYTVMSYSDNDTTDLAYD- 203
Query: 178 GYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
AT M+ D++ +Q +YGA + GN+ Y + TIYD+ G D +D +
Sbjct: 204 --PATFMILDVLTLQHLYGANASQNTGNDSYTL----VRDDLYDTIYDAAGRDAIDQSS- 256
Query: 237 GGVKNYIDLNTESWSSI---------------GGYEKNMTIAQHTVIESVVGSSGNDVVI 281
YI+L S++ ++T IE GS D++
Sbjct: 257 ALEGWYIELPDVYLSTVVDTRAGMAMSMAASALAVPTDLTWLAGD-IEDATGSGFADIIF 315
Query: 282 GNSANNVFFESSGNDVFDGSS 302
G+ N G+D+ G +
Sbjct: 316 GSGLANDVSGLGGDDILSGEA 336
>gi|209526449|ref|ZP_03274976.1| hypothetical protein AmaxDRAFT_3800 [Arthrospira maxima CS-328]
gi|209493084|gb|EDZ93412.1| hypothetical protein AmaxDRAFT_3800 [Arthrospira maxima CS-328]
Length = 300
Score = 114 bits (284), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 93/242 (38%), Gaps = 23/242 (9%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y+A ++D+ +A A+ + + +HFS +G EGR FD YL D+++
Sbjct: 8 FDEGFYLAQNQDVKDAIANG--VFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPDIQS 65
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ AA H++ G + +P+ F + Y+ + + A+ +HF
Sbjct: 66 EVEAGITTAAAHFVNIGQTDNLSPNPFFDPVFYLQQNPSVAQGVANGEF---TAFEHFFK 122
Query: 557 FGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGRALGIS--GMQ 611
G +G S +F+ + Y D + + +H+ G GR G
Sbjct: 123 IGQFQGLNPSESFDTEFYRDRNFDAVQGIEEEIIGSLFEHFFRFGSPLGRLGAPPQFGDD 182
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLYTD----------YFGDGNYYDSDLYSMHDIN 661
+ + L + ++ D V++Y F G D+++ + D N
Sbjct: 183 LSNAIALDTLLGSRTIVNSVTDDNPVNIYEFIIPNNGSEFSLFLHGLKADANVDLIQDFN 242
Query: 662 HD 663
+
Sbjct: 243 QN 244
Score = 101 bits (252), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 10/170 (5%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y A +D+ I VFE + +HF +G EGR FD YL D+++
Sbjct: 6 TLFDEGFYLAQNQDVKDAIANGVFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPDIQS 65
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ AA H++ G + +P+ F + Y+ + + A+ +HF
Sbjct: 66 EVEAGITTAAAHFVNIGQTDNLSPNPFFDPVFYLQQNPSVAQGVANGEF---TAFEHFFK 122
Query: 473 FGCEEGRFV--TFDSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGR 519
G +G +FD+ Y D ++ + G+ H+ G GR
Sbjct: 123 IGQFQGLNPSESFDTEFYRDRNFDAVQGIEEEIIGSLFEHFFRFGSPLGR 172
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 51/165 (30%), Gaps = 10/165 (6%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-- 398
E Q Y A D+ + + + HF G ++
Sbjct: 33 FEHFSRYGQFEGRTPNPIFDGEFYLAQNPDIQSEVEAGITTAAAHFVNIGQTDNLSPNPF 92
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD YL + + A H+ G +G NP +F Y + D +
Sbjct: 93 FDPVFYLQQNPSVAQGVANGEFTAFEHFFKIGQFQGLNPSESFDTEFYRDRNFDAVQGIE 152
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ +++ +HF FG GR + DDL N D
Sbjct: 153 E--EIIGSLFEHFFRFGSPLGRLGAPPQF-----GDDLSNAIALD 190
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+A ++D+ +A A+ + + +HFS +G EGR+ F+ + YL D+
Sbjct: 7 LFDEGFYLAQNQDVKDAIANG--VFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPDIQ 64
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
+ + + AA H++ G + + F V L +
Sbjct: 65 SEVEAGITTAAAHFVNIGQTDNLS---PNPFFDPVFYLQQN 102
>gi|170740196|ref|YP_001768851.1| FG-GAP repeat-containing protein [Methylobacterium sp. 4-46]
gi|168194470|gb|ACA16417.1| FG-GAP repeat protein [Methylobacterium sp. 4-46]
Length = 861
Score = 114 bits (284), Expect = 7e-23, Method: Composition-based stats.
Identities = 71/338 (21%), Positives = 118/338 (34%), Gaps = 56/338 (16%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLT-------------FEETSIHSDIKFISSNNGYVCT 91
+ + +G WS V ++ F S S + + +
Sbjct: 149 SNWTTTERNALISGMGLWSAVANIQFAQAASAATASFTFIRGSDGSAYENNGIVASAIGS 208
Query: 92 PRYDSRYFMEINFDKADVWRYGIG-----KGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
++ I+ D + IG G +HE+GH +GL H G+YN G
Sbjct: 209 TTINNPTGAIISIDTSVAGFGPIGGSFDTYGGYPYQTLVHELGHLIGLGHGGAYN-GNVN 267
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC--------------------ATPMVS 186
D+ L ++MSY P D+ Y TPM
Sbjct: 268 SATQQFSAYDTRLWTLMSYIDPFDTSAKYYNQYPVTGTSWGTSPTNGLYYYREPTTPMFL 327
Query: 187 DIVAVQKIYGAPKGSLGNN-IYKIEVQ-----------QKDSPFIQTIYDSGGDDLLDLT 234
DI+A Q+IYGAP S NN + + + T++ +G + LDL+
Sbjct: 328 DILAAQQIYGAPTTSTLNNVTFGFNSTVPGLINQYFNFTVNQHPVVTLFATGASNTLDLS 387
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-NNVFFESS 293
I L +++S G N+ I T++ +G++G+D + N + +
Sbjct: 388 GWSN-GATISLTPGTFTSANGMINNIGIGPSTILTKAIGTTGSDTFLPNPSYVTTMTGNG 446
Query: 294 GNDVFDG---SSGLDTFFYYAPSYLYKIYRFENAIIVY 328
GND F LDT +A + ++ Y
Sbjct: 447 GNDTFKSTMFGLSLDTITDFAQGDKIILTDGASSTFTY 484
>gi|195953945|ref|YP_002122235.1| glycosyl transferase family 2 [Hydrogenobaculum sp. Y04AAS1]
gi|195933557|gb|ACG58257.1| glycosyl transferase family 2 [Hydrogenobaculum sp. Y04AAS1]
Length = 746
Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL SY D+R HYI HG +EGRNP+ F Y+ +ED+ +
Sbjct: 22 FDERYYLKSYPDIR----LGDIDPIIHYIKHGAREGRNPNPFFDTTFYLNRYEDVAKSRI 77
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ +G +EGR+ F+S YL S D++ HYI HG
Sbjct: 78 NP-------LLHYILYGAKEGRWAGPNFNSGFYLLSNPDVKKAG----LNPLLHYILHGQ 126
Query: 516 KEGRNPDAFKALEY-IASHEDLINAFA-DAPDLVQAGKDHFSNFGYE 560
EGR E + ++ L + F ++ D+ +G+
Sbjct: 127 YEGRKAKIETDRELKLYNYRKLSSLFLFINKSNIKKSMDYIRKYGFR 173
Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL SY D+R HYI HG +EGRNP+ F Y+ +ED+ +
Sbjct: 22 FDERYYLKSYPDIRL----GDIDPIIHYIKHGAREGRNPNPFFDTTFYLNRYEDVAKSRI 77
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ H+ +G +EGR FN YL S D+ HYI HG
Sbjct: 78 NP-------LLHYILYGAKEGRWAGPNFNSGFYLLSNPDVKKA----GLNPLLHYILHGQ 126
Query: 600 KEGRALGIS 608
EGR I
Sbjct: 127 YEGRKAKIE 135
Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 18/153 (11%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FD 400
+ Q Y SY D+ + + H+ + G EGR+ FD
Sbjct: 6 KYNIYLQRYIIKKSGLFDERYYLKSYPDIR----LGDIDPIIHYIKHGAREGRNPNPFFD 61
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
+ YL Y+D+ R HYI +G KEGR F + Y+ S+ D+ A +
Sbjct: 62 TTFYLNRYEDVAK----SRINPLLHYILYGAKEGRWAGPNFNSGFYLLSNPDVKKAGLNP 117
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
H+ G EGR ++ L Y
Sbjct: 118 -------LLHYILHGQYEGRKAKIETDRELKLY 143
Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 60/174 (34%), Gaps = 27/174 (15%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
F Y+ S+ D+ D H+ G EGR FD+ YL Y+
Sbjct: 18 KSGLFDERYYLKSYPDIRLGDIDP-------IIHYIKHGAREGRNPNPFFDTTFYLNRYE 70
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
D+ R HYI +G KEGR F + Y+ S+ D+ A +
Sbjct: 71 DVAK----SRINPLLHYILYGAKEGRWAGPNFNSGFYLLSNPDVKKAGLNP-------LL 119
Query: 553 HFSNFGYEEGRSITFNPDLYLTSY-----DDLWNVFGSDRSAAAQHYIT-HGMK 600
H+ G EGR D L Y L+ + YI +G +
Sbjct: 120 HYILHGQYEGRKAKIETDRELKLYNYRKLSSLFLFINKSNIKKSMDYIRKYGFR 173
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 16/102 (15%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
+ F Y+ S+ D+ D H+ G EGR+ F+ YL Y
Sbjct: 17 KKSGLFDERYYLKSYPDIRLGDIDP-------IIHYIKHGAREGRNPNPFFDTTFYLNRY 69
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
+D+ R HYI +G KEGR +G F S L
Sbjct: 70 EDVAK----SRINPLLHYILYGAKEGR---WAGPNFNSGFYL 104
>gi|296114328|ref|ZP_06832982.1| glycosyl transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295979089|gb|EFG85813.1| glycosyl transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 980
Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats.
Identities = 61/282 (21%), Positives = 102/282 (36%), Gaps = 22/282 (7%)
Query: 364 YTASYEDLIQVIG-QDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR- 419
Y Y +I D + + +FG + G FD Y Y D+ ++ S +
Sbjct: 20 YKQHYHAVISAFDLHDDGSIFRFYKDFGENLGHSPNMFFDEEWYRMVYPDVLSLIESGKV 79
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ HY +G K RNP+ F E+ + ++ ++ G DHF +G E R
Sbjct: 80 SSGFEHYHQYGCK-DRNPNCFFDEEFYCRTQVCMSPEQLEAHGLRNGYDHFLRYGAHEKR 138
Query: 480 FVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYIT-HGVKEGRNPDAFKALEYIASHEDL 536
+ F + L++ D + AA T H V E R F Y+ ++ D+
Sbjct: 139 DASLFFSTTLFIRENPDFLYDERNGIFAAFLENATDHTVVERRTSAYFDPEWYMRAYPDM 198
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE--GRSITFNPDLYLTSYDDLWNVFGSD-RSAAAQH 593
D Q H+ E + F+ Y D+ V A +H
Sbjct: 199 SRHI----DEWQHPLRHYLGNPSPEAFDPNPFFSERFYTQGNPDVTAVIADGCFRNAYEH 254
Query: 594 YITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHK 635
+I +G E R + +NL+ ++D A + K
Sbjct: 255 FIRYGQYEDRRPH-------ARVNLTSYAQDPAISDVVGQGK 289
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/282 (17%), Positives = 98/282 (34%), Gaps = 26/282 (9%)
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILE---YTASYEDLIQVIGQDVFE-SMKHFYEFGL 391
D D RF +++ + Y Y D++ +I +H++++G
Sbjct: 32 DLHDDGSIFRFYKDFGENLGHSPNMFFDEEWYRMVYPDVLSLIESGKVSSGFEHYHQYGC 91
Query: 392 SEGRDIT--FDSYLY----LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK-ALE 444
R+ FD Y + + G H++ +G E R+ F
Sbjct: 92 K-DRNPNCFFDEEFYCRTQVCMSPEQLEAHG--LRNGYDHFLRYGAHEKRDASLFFSTTL 148
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSDR 503
+I + D + + + + ++ ++ E R + D Y+ +Y D+ +
Sbjct: 149 FIRENPDFL--YDERNGIFAAFLENATDHTVVERRTSAYFDPEWYMRAYPDMSRHI-DEW 205
Query: 504 GAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
RHY+ + E +P+ F Y + D+ AD + +HF +G E
Sbjct: 206 QHPLRHYLGNPSPEAFDPNPFFSERFYTQGNPDVTAVIADG--CFRNAYEHFIRYGQYED 263
Query: 563 RSI--TFNPDLYLT--SYDDLWNVFGSDRSAAAQHYITHGMK 600
R N Y + D+ G + A + + +G
Sbjct: 264 RRPHARVNLTSYAQDPAISDVVG-QGKYPTPFAAYAMLYGKF 304
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 50/170 (29%), Gaps = 15/170 (8%)
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-------DQCIDS 353
+G D F Y F + + N DFL D FA D +
Sbjct: 123 RNGYDHFLRYGAHEKRDASLFFSTTLFIRENP---DFLYDERNGIFAAFLENATDHTVVE 179
Query: 354 VNVKQ-RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
Y +Y D+ + I + ++H+ E D F Y D
Sbjct: 180 RRTSAYFDPEWYMRAYPDMSRHIDEWQ-HPLRHYLGNPSPEAFDPNPFFSERFYTQGNPD 238
Query: 411 LRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ V A H+I +G E R P A L A + +
Sbjct: 239 VTAVIADGCFRNAYEHFIRYGQYEDRRPHARVNLTSYAQDPAISDVVGQG 288
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 13/133 (9%)
Query: 483 FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 540
F++ Y Y + + F D G+ R Y G G +P+ F Y + D+++
Sbjct: 15 FNASWYKQHYHAVISAFDLHDDGSIFRFYKDFGENLGHSPNMFFDEEWYRMVYPDVLSLI 74
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTS----YDDLWNVFGSDRSAAAQHY 594
V +G +H+ +G + R+ F+ + Y + + G H+
Sbjct: 75 ESGK--VSSGFEHYHQYGCK-DRNPNCFFDEEFYCRTQVCMSPEQLEAHG--LRNGYDHF 129
Query: 595 ITHGMKEGRALGI 607
+ +G E R +
Sbjct: 130 LRYGAHEKRDASL 142
>gi|288963201|ref|YP_003453480.1| hypothetical protein AZL_f01760 [Azospirillum sp. B510]
gi|288915453|dbj|BAI76936.1| hypothetical protein AZL_f01760 [Azospirillum sp. B510]
Length = 1718
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/330 (19%), Positives = 102/330 (30%), Gaps = 63/330 (19%)
Query: 300 GSSGLD------TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G SG D T + + Y E + ++ +D+++ +
Sbjct: 35 GGSGQDPLDTIVTTIANSGLFNLAHYSRERGTSFTNLSDAIRDYITGGD-------AEGL 87
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDL 411
Y + D++ + HF G +EGR FD Y+ D
Sbjct: 88 SPHPLFDAAYYRSCNPDMVA----SGLLPLLHFLSSGAAEGRAPHPLFDPTYYISQAGD- 142
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ R HY+T G+ G +P F Y D + HF
Sbjct: 143 -----AARANPLLHYLTTGIGAGLSPHPLFDPAHYQLQAGD---------EARFGPLQHF 188
Query: 471 SNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
+ G EGR F+ Y+ D + HY+T G G +P F
Sbjct: 189 LSSGAIEGRAPHPLFNPAHYIAQAGDAAHA------NPLLHYLTAGAGAGLSPHPLFDPA 242
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGS 585
YIA + +A H+ G G S F+P Y++ D
Sbjct: 243 HYIAQAGEAAHA---------NPLLHYLTAGAGAGLSPHPLFDPTYYISQAGDAARA--- 290
Query: 586 DRSAAAQHYITHGMKEGRALG--ISGMQFK 613
HY+T G+ G + + ++
Sbjct: 291 ---NPLLHYLTTGIGAGLSPHPLFDPVHYQ 317
Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 84/265 (31%), Gaps = 45/265 (16%)
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAA 422
A Y ++ ++++ + G +EG FD+ Y D+ +
Sbjct: 57 LAHYSRERGTSFTNLSDAIRDYITGGDAEGLSPHPLFDAAYYRSCNPDMV----ASGLLP 112
Query: 423 ARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF- 480
H+++ G EGR P F YI+ D A H+ G G
Sbjct: 113 LLHFLSSGAAEGRAPHPLFDPTYYISQAGDAARA---------NPLLHYLTTGIGAGLSP 163
Query: 481 -VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD Y D R +H+++ G EGR P F YIA D +
Sbjct: 164 HPLFDPAHYQLQAGD------EARFGPLQHFLSSGAIEGRAPHPLFNPAHYIAQAGDAAH 217
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
A H+ G G S F+P Y+ + + HY+T
Sbjct: 218 A---------NPLLHYLTAGAGAGLSPHPLFDPAHYIAQAGEAAHA------NPLLHYLT 262
Query: 597 HGMKEGRALGISGMQFKSVMNLSEK 621
G G + F +S+
Sbjct: 263 AGAGAGLS---PHPLFDPTYYISQA 284
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/337 (18%), Positives = 94/337 (27%), Gaps = 91/337 (27%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGS 407
L A Y +Q + F ++HF G EGR F+ Y+
Sbjct: 154 TTGIGAGLSPHPLFDPAHY--QLQAGDEARFGPLQHFLSSGAIEGRAPHPLFNPAHYIAQ 211
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
D + HY+T G G +P F YIA + +A
Sbjct: 212 AGDAAHA------NPLLHYLTAGAGAGLSPHPLFDPAHYIAQAGEAAHA---------NP 256
Query: 467 KDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNV----------FGSDRGA--------- 505
H+ G G FD Y+ D G+
Sbjct: 257 LLHYLTAGAGAGLSPHPLFDPTYYISQAGDAARANPLLHYLTTGIGAGLSPHPLFDPVHY 316
Query: 506 -----------AARHYITHGVKEGRNPDA-FKALEYIA-------SHE------------ 534
+ +H+++ G EGR P F YIA ++
Sbjct: 317 QLQAEDEAHFGSLQHFLSSGAAEGRVPHPLFDPAHYIAQAGEAAHANPLLHYLTTEIGAG 376
Query: 535 -------DLINAFADAPDLVQAG-KDHFSNF--GYEEGRSITFNPDLYLTSYDDLWNVFG 584
D + A A + +A H+ G F+P Y+ DD
Sbjct: 377 LSPHPLFDPAHYIAQAGEAARANPLLHYLTTEIGAGLSPHPLFDPAYYIAQADDAARA-- 434
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
+HY+T G+ G + F L++
Sbjct: 435 ----NPLRHYLTAGIAAGLS---PHPLFNPAHYLAQA 464
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/287 (19%), Positives = 81/287 (28%), Gaps = 53/287 (18%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFD 400
+ Y ED + F S++HF G +EGR FD
Sbjct: 295 HYLTTGIGAGLSPHPLFDPVHYQLQAED------EAHFGSLQHFLSSGAAEGRVPHPLFD 348
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
Y+ + HY+T + G +P F YIA + A
Sbjct: 349 PAHYIA------QAGEAAHANPLLHYLTTEIGAGLSPHPLFDPAHYIAQAGEAARA---- 398
Query: 460 PDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
H+ G FD Y+ DD RHY+T G+
Sbjct: 399 -----NPLLHYLTTEIGAGLSPHPLFDPAYYIAQADDAARA------NPLRHYLTAGIAA 447
Query: 518 GRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF--GYEEGRSITFNPDLYLT 574
G +P F Y+A D A H+ G F+P Y+
Sbjct: 448 GLSPHPLFNPAHYLAQAGDAARA---------NPLLHYLTAEIGAGLSPHPLFDPAHYVA 498
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
D R HY+T G+ G + F L +
Sbjct: 499 QAGDAA------RVNPLLHYLTAGIAAGLS---PHPLFDPAHYLVQA 536
Score = 91.7 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 69/260 (26%), Gaps = 40/260 (15%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGS 407
+ L A Y L Q + H+ G + G FD Y+
Sbjct: 874 TAEIGAGLSPHPLFDPAHY--LTQAGETARANPLLHYVASGAARGLSPHLLFDPACYMA- 930
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
+ HY+ G +G +P F Y A
Sbjct: 931 -----AAGEAAWANPLLHYVASGAAQGLSPHPLFDPACY---------VAAAGEAARANP 976
Query: 467 KDHFSNF--GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
H+ FD+ Y Y D+ HY+ G EGR P
Sbjct: 977 LLHYVTAPPSVAPSPHPLFDAGYYRSRYPDVLGSG----LPLLVHYVRSGGSEGRQPHPL 1032
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNV 582
L+ A + H+ G G S F+P Y+ +D
Sbjct: 1033 FDLDRYAVQHPEVLR------RKSPALLHYVTVGAAVGSSPCLLFDPAFYVEQWD----- 1081
Query: 583 FGSDRSAAAQHYITHGMKEG 602
G + HY+T G G
Sbjct: 1082 -GPAPADPLSHYLTVGAAAG 1100
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 75/256 (29%), Gaps = 48/256 (18%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLR 412
Y + Y D++ + H+ G SEGR FD Y+ D
Sbjct: 701 PHPLFDAGYYRSRYADVLG----SGLPLLVHYVRSGGSEGRQPYPLFDPAHYIAQAGD-- 754
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ R HY+T + G +P F Y+A D A P L H+
Sbjct: 755 ----AARANPLLHYLTAEIGAGLSPHPLFDPAHYLAQVGD---AARVNPLL------HYL 801
Query: 472 NFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 528
G FD YL D HY+T G+ G +P F
Sbjct: 802 TAEIGAGLSPHPLFDPGHYLAQAGDAARA------NPLLHYLTAGIAVGLSPHPLFDPAH 855
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNF--GYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
Y+ + H+ G F+P YLT +
Sbjct: 856 YLVQAGEAARV---------NPLLHYLTAEIGAGLSPHPLFDPAHYLT------QAGETA 900
Query: 587 RSAAAQHYITHGMKEG 602
R+ HY+ G G
Sbjct: 901 RANPLLHYVASGAARG 916
Score = 87.1 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/304 (15%), Positives = 73/304 (24%), Gaps = 61/304 (20%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGS 407
+ L A Y + Q + H+ G++ G FD YL
Sbjct: 478 TAEIGAGLSPHPLFDPAHY--VAQAGDAARVNPLLHYLTAGIAAGLSPHPLFDPAHYLVQ 535
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED--------------- 451
D + R RHY+T G+ G +P F Y+ D
Sbjct: 536 AGD------AARVDPLRHYLTAGIAAGLSPHPLFDPAHYLVQAGDAARVNPLLHYLTAGA 589
Query: 452 ----------LINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVF 499
+ H+ G FD Y+ D
Sbjct: 590 GLSPHPLFDPVHYVAQAGETARANPLRHYLTAEIGAGLSPHPLFDPAHYIAQAGDAARA- 648
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF-- 557
HY+ G G +P + + A H+
Sbjct: 649 -----NPLLHYLASGAARGLSPHPL--------FDPVCYVAAAGEAARANPLLHYVTAPP 695
Query: 558 GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMN 617
F+ Y + Y D+ HY+ G EGR F
Sbjct: 696 SVAPSPHPLFDAGYYRSRYADVL----GSGLPLLVHYVRSGGSEGRQ---PYPLFDPAHY 748
Query: 618 LSEK 621
+++
Sbjct: 749 IAQA 752
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/345 (18%), Positives = 93/345 (26%), Gaps = 70/345 (20%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFD 400
+ Y A +D + ++H+ G++ G F+
Sbjct: 403 HYLTTEIGAGLSPHPLFDPAYYIAQADDAARA------NPLRHYLTAGIAAGLSPHPLFN 456
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
YL D + R HY+T + G +P F Y+A D A
Sbjct: 457 PAHYLAQAGD------AARANPLLHYLTAEIGAGLSPHPLFDPAHYVAQAGD---AARVN 507
Query: 460 PDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
P L H+ G G FD YL D V RHY+T G+
Sbjct: 508 PLL------HYLTAGIAAGLSPHPLFDPAHYLVQAGDAARV------DPLRHYLTAGIAA 555
Query: 518 GRNPDA-FKALEYIASHEDLIN------------------------AFADAPDLVQAG-K 551
G +P F Y+ D A A + +A
Sbjct: 556 GLSPHPLFDPAHYLVQAGDAARVNPLLHYLTAGAGLSPHPLFDPVHYVAQAGETARANPL 615
Query: 552 DHFSNF--GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG--I 607
H+ G F+P Y+ D HY+ G G +
Sbjct: 616 RHYLTAEIGAGLSPHPLFDPAHYIAQAGDAARA------NPLLHYLASGAARGLSPHPLF 669
Query: 608 SGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDS 652
+ + V E +R L V D YY S
Sbjct: 670 DPVCY--VAAAGEAARANPLLHYVTAPPSVAPSPHPLFDAGYYRS 712
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/288 (17%), Positives = 79/288 (27%), Gaps = 42/288 (14%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGS 407
+ + L +A + + + H+ E G FD Y
Sbjct: 1094 TVGAAAGLDPHPLFDSAYLRGVDPEAAESTRPLLVHYAERPAGSGLSPHPLFDPAYYRRV 1153
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
Y DL+ G HY+ G EGR P F L Y + P
Sbjct: 1154 YVDLQGYPGD----LLVHYLIVGENEGRKPHPLFDPLFYRQQ--------SAGPLTPANA 1201
Query: 467 KDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNV----FGSDRGAAARHYITHGVKEGRN 520
H+ G G + F + Y + R V G R Y+ G +
Sbjct: 1202 LVHYLVEGAGRGLDPSPLFSTRFYQEHGQEQRPVPTTLRGRARSNPLADYVMRGARRNLA 1261
Query: 521 PDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYD 577
P+ F + Y A P H+ G +EG F+ Y
Sbjct: 1262 PNPCFDPVFYTA----------QLPVRPSDPLVHYLETGADEGHDPHPDFDQAYYRAG-- 1309
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDK 625
+ +HY+ G GR F +++ +
Sbjct: 1310 ---SAEPERIGNPLEHYLLTGRSAGRR---PSPLFDPLLDRQRLDHLR 1351
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 84/277 (30%), Gaps = 38/277 (13%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRN 413
+Q L Y + + ++ H+ G + G FD Y+ +D
Sbjct: 1026 GRQPHPLFDLDRYAVQHPEVLRRKSPALLHYVTVGAAVGSSPCLLFDPAFYVEQWD---- 1081
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
G HY+T G G +P Y+ D A + P LV H++
Sbjct: 1082 --GPAPADPLSHYLTVGAAAGLDPHPLFDSAYL-RGVDPEAAESTRPLLV-----HYAER 1133
Query: 474 GCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYI 530
G FD Y Y DL+ G HY+ G EGR P F L Y
Sbjct: 1134 PAGSGLSPHPLFDPAYYRRVYVDLQGYPGD----LLVHYLIVGENEGRKPHPLFDPLFYR 1189
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWN----VFG 584
P H+ G G S F+ Y + + G
Sbjct: 1190 QQSA--------GPLTPANALVHYLVEGAGRGLDPSPLFSTRFYQEHGQEQRPVPTTLRG 1241
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
RS Y+ G + R L + F V ++
Sbjct: 1242 RARSNPLADYVMRGAR--RNLAPNPC-FDPVFYTAQL 1275
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 70/273 (25%), Gaps = 48/273 (17%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFD 400
A+ Y A D + + H+ G++ G FD
Sbjct: 799 HYLTAEIGAGLSPHPLFDPGHYLAQAGDAARA------NPLLHYLTAGIAVGLSPHPLFD 852
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
YL + R HY+T + G +P F Y+ + A
Sbjct: 853 PAHYL------VQAGEAARVNPLLHYLTAEIGAGLSPHPLFDPAHYLTQAGETARA---- 902
Query: 460 PDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
H+ G G FD Y + + HY+ G +
Sbjct: 903 -----NPLLHYVASGAARGLSPHLLFDPACY------MAAAGEAAWANPLLHYVASGAAQ 951
Query: 518 GRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF--GYEEGRSITFNPDLYLT 574
G +P F Y+A A H+ F+ Y +
Sbjct: 952 GLSPHPLFDPACYVA---------AAGEAARANPLLHYVTAPPSVAPSPHPLFDAGYYRS 1002
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
Y D+ HY+ G EGR
Sbjct: 1003 RYPDVL----GSGLPLLVHYVRSGGSEGRQPHP 1031
>gi|56698492|ref|YP_168868.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi
DSS-3]
gi|56680229|gb|AAV96895.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 2164
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/429 (18%), Positives = 140/429 (32%), Gaps = 87/429 (20%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T++ GDD L G N + + G + N + + + G G D
Sbjct: 852 DTLWGRDGDDTL----YGDAANDVLRGEAGDDVLFGGDHNDRLMGGDGDDFLNGGEGRDT 907
Query: 280 VIGNSANNVFFESS------------------GNDVFD-----------GSSGLDTFFYY 310
+ G + ++V + + GND+F+ G G DT
Sbjct: 908 IYGGAGDDVAYGGAEYDLFFDGDGDDVYKGGGGNDIFELQTHSGQNVVQGGLGTDTLRLN 967
Query: 311 APSYLYKIYR-FENAIIVYDANEHKQD-------------------------FLSDVERL 344
+++ + + + E D + DVE++
Sbjct: 968 GHRDMWQWESVHKTSQVQTGTVEGGPDGGQPIYSTAHQGKGQYIFYSGDAVVHVQDVEQV 1027
Query: 345 RFADQCIDS------VNVKQRSILEYTASYEDLIQVIGQDVFESMK-----HFYEFGLSE 393
F + + ++ L Y ASY+DLI D S H+ +G +E
Sbjct: 1028 VFLGNSGKTFWSHKALEDEEAFSLNYVASYDDLIANDEVDNTSSNWTIGRDHWVNYGQAE 1087
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
R++TF+ YL + + + G D AA RHYI G G + F A +Y+ ++ D+
Sbjct: 1088 NREVTFNPLQYLAANPSVYQLHGFDLTAATRHYIDTGHDAGLSRGDFDAEQYLKNYSDMR 1147
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRF--------VTFDSYLYLGSYDD------LRNVF 499
+ F + H+ G GR + +L S D L
Sbjct: 1148 SQFGAD---LSAATRHYIEHGRAAGRTDDAVSGAMTDAEFAAWLTSLADQDEVIYLVEAD 1204
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
+ A ++ E +P+A I ++ + D H+
Sbjct: 1205 AGEDNEATFYFADRDDLEIADPNAVIFGHAIVANNTSAGSGNDTIYADSTSTGHWLYLNQ 1264
Query: 560 EEGRSITFN 568
+E S + +
Sbjct: 1265 QESTSGSED 1273
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 69/362 (19%), Positives = 129/362 (35%), Gaps = 58/362 (16%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + T+ + + G +G+DV+ G N+ G+D +G G DT + A
Sbjct: 856 GRDGDDTLYGDAANDVLRGEAGDDVLFGGDHNDRLMGGDGDDFLNGGEGRDTIYGGAGDD 915
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQCIDSVNVKQRSILEYTASY 368
+ A + D E + Q + + ++ +
Sbjct: 916 ----VAYGGAEYDLFFDGDGDDVYKGGGGNDIFELQTHSGQNVVQGGLGTDTLR--LNGH 969
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
D+ Q ++ G +G + +
Sbjct: 970 RDMWQWESVHKTSQVQTGTVEGGPDGGQPIYST--------------------------- 1002
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+G+ F + + + +D+ L GK +S+ E+ + + Y
Sbjct: 1003 --AHQGKGQYIFYSGDAVVHVQDVEQVV----FLGNSGKTFWSHKALEDEEAFSLN---Y 1053
Query: 489 LGSYDDLRNVFGSDRGA-----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+ SYDDL D + H++ +G E R F L+Y+A++ +
Sbjct: 1054 VASYDDLIANDEVDNTSSNWTIGRDHWVNYGQAENREV-TFNPLQYLAANPSVYQLHGFD 1112
Query: 544 PDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
+ A H+ + G++ G S F+ + YL +Y D+ + FG+D SAA +HYI HG G
Sbjct: 1113 ---LTAATRHYIDTGHDAGLSRGDFDAEQYLKNYSDMRSQFGADLSAATRHYIEHGRAAG 1169
Query: 603 RA 604
R
Sbjct: 1170 RT 1171
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/371 (20%), Positives = 133/371 (35%), Gaps = 33/371 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E N T+ + V+G G D + G ++ G+D DG +G D F
Sbjct: 791 LSGGEGNDTLYAQVGDDLVIGGIGQDQLHGEDGDDYLLGGDGHDNLDGGNGDDQLFGG-D 849
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ R + + DA + + L D + L + +
Sbjct: 850 NEDTLWGRDGDDTLYGDAANDVLRGEAGDDVLFGGDHNDRLMGGDGDDFLNGGEGRDTIY 909
Query: 373 QVIGQDVFESMKHFYEFGLSE--------GRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
G DV + F + G + F+ + G ++ G+D
Sbjct: 910 GGAGDDVAYGGAEYDLFFDGDGDDVYKGGGGNDIFELQTHSGQNV-VQGGLGTDTLRLNG 968
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
H ++ + H+ G+ +S +G+++ +
Sbjct: 969 H--------------RDMWQWESVHKTSQVQTGTVEGGPDGGQPIYSTAHQGKGQYIFYS 1014
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN--AFAD 542
+ D + VF + G +H E + +AF L Y+AS++DLI +
Sbjct: 1015 GDAVVHVQDVEQVVFLGNSGKTFW---SHKALE--DEEAFS-LNYVASYDDLIANDEVDN 1068
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G+DH+ N+G E R +TFNP YL + ++ + G D +AA +HYI G G
Sbjct: 1069 TSSNWTIGRDHWVNYGQAENREVTFNPLQYLAANPSVYQLHGFDLTAATRHYIDTGHDAG 1128
Query: 603 RALG-ISGMQF 612
+ G Q+
Sbjct: 1129 LSRGDFDAEQY 1139
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 12/160 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD L G +Y+D S + G + +++ G ND++ GN
Sbjct: 1433 GDDTLSG---GSGNDYLDGGEGDDS-LSGGNAQDALFGGEGADTLDGGGDNDILYGNDGT 1488
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ--------DFL 338
+ S ND G +G DT A+ V + D
Sbjct: 1489 DSLDGGSANDALHGGAGADTLNGGDGIDAASYAGSSEAVYVRLDGTNASNFTGDAVGDVF 1548
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
S +E L ++ ++L + L + G D
Sbjct: 1549 SGIENLFGSEHDDQLYGDASHNVLWGADGNDTLNGLAGND 1588
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 53/170 (31%), Gaps = 13/170 (7%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIG--GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
S ++ G+D L G + +D + S G + + + +
Sbjct: 1780 HGSNGKDLLFGDAGNDTLTGGNDGITADADTLDGGDGNDSLTSGQTLAPEAGREGLGDHL 1839
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA- 330
G +G+D + G +AN+V SGND G G D+ + A + D
Sbjct: 1840 FGQAGDDTLTGGAANDVLKGGSGNDELWGGDGNDSIYSGAAEANQSGNDTADGGAGDDLL 1899
Query: 331 ----------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
D L+ + L A++ SI D
Sbjct: 1900 VGSNGYDHLKGGDGNDTLNGGDDLATAERDTLEGGAGNDSITSGQVETPD 1949
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 62/178 (34%), Gaps = 2/178 (1%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++I + + G D D+ + G +Y+ + GG E + ++
Sbjct: 1307 GDDILRGQDGSDSITGGDGQDTLYGHDGADVLVGGLGNDYVRGGNGADRQWGG-EGDDSV 1365
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G +GND + G+ ++V GND DG +G D + A + +
Sbjct: 1366 YGDAGADTLFGENGNDTLKGHDGSDVLLGGEGNDTLDGMNGSDRLYGEAGNDSL-VGDLG 1424
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + + S + L + + L + L D+
Sbjct: 1425 DDRLEGNVGDDTLSGGSGNDYLDGGEGDDSLSGGNAQDALFGGEGADTLDGGGDNDIL 1482
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 17/164 (10%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGN 277
++ + G+D L+ G+ DL + + G ++ + +S+ G +
Sbjct: 1569 HNVLWGADGNDTLN-----GLAGNDDLMGGDGADRLIGDSGIDRLSGESGADSLYGGADR 1623
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA------- 330
D + G + ++ +GND G G D+ + A + D
Sbjct: 1624 DFLFGGADDDHLEGGAGNDSLSGGDGNDSIYVGADDANVSGNDTADGGAGDDLIIGSNGY 1683
Query: 331 ----NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
D L+ + L A++ SI D
Sbjct: 1684 DHLKGGDGNDTLNGGDDLATAERDTLEGGTGNDSITSGQVVIPD 1727
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 9/152 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
K + G+D LD L G N + + G + T++
Sbjct: 1380 NDTLKGHDGSDVLLGGEGNDTLDGMNGSDRLYGEAGNDSLVGDLGDDRLEGNVGDDTLSG 1439
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + G G+D + G +A + F G D DG D + + +A
Sbjct: 1440 GSGNDYLDGGEGDDSLSGGNAQDALFGGEGADTLDGGGDNDILYGNDGTDSLDGGSANDA 1499
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ D L+ + + A S V
Sbjct: 1500 L----HGGAGADTLNGGDGIDAASYAGSSEAV 1527
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 4/143 (2%)
Query: 240 KNYIDLNTESWSSIGGYEK-NMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ IDL + G + N+ A T SV G +G D V+G A+++ G+D
Sbjct: 646 PDDIDLVSAWLDGAEGNDNANLLDASGHTRSVSVNGGAGADTVLGGQADDILIGGEGSDS 705
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNV 356
DG +G D + A + ++ + + D ++ ER D +
Sbjct: 706 LDGGAGNDLVIFDADDVAIRGGDGFDSALYSGTSSITFDLAANGFERASGGDASDTLIAE 765
Query: 357 -KQRSILEYTASYEDLIQVIGQD 378
S+ Y + +DL++ G D
Sbjct: 766 YTSTSVWLYGRAGQDLLRGGGAD 788
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 57/188 (30%), Gaps = 13/188 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + G+ I + G + + T + ++ G
Sbjct: 1505 GADTLNGGDGIDAASYAGSSEAVYVRL---DGTNASNFTGDAVGDVF-----SGIENLFG 1556
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + + + G+ GND + G + N+ G D G SG+D + +
Sbjct: 1557 SEHDDQLYGDASHNVLWGADGNDTLNGLAGNDDLMGGDGADRLIGDSGIDRLSGESGADS 1616
Query: 316 -----YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + F A + D LS + D NV + A +
Sbjct: 1617 LYGGADRDFLFGGADDDHLEGGAGNDSLSGGDGNDSIYVGADDANVSGNDTADGGAGDDL 1676
Query: 371 LIQVIGQD 378
+I G D
Sbjct: 1677 IIGSNGYD 1684
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 14/149 (9%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S ++ G+D L G + L + T A E++
Sbjct: 2003 GSNGKDLLHGDAGNDTLTGGDDGITADADTLYGGDGNDH--LTSGQTDAPEAGREAL--- 2057
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
D G + N+ ND +G +G D+F + + I F + +
Sbjct: 2058 --GDHFYGEAGNDTLTGGKANDYLEGGTGADSFVFLSDFGQDTIADFSTS------QSGE 2109
Query: 335 QDFLSDVERLR-FADQCIDSVNVKQRSIL 362
LS V ++ F+D + + L
Sbjct: 2110 TIDLSGVSQITSFSDLTTNHLTQSGSDAL 2138
>gi|291571482|dbj|BAI93754.1| phosphodiesterase/alkaline phosphatase D [Arthrospira platensis
NIES-39]
Length = 723
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 11/200 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D + Y+A++ D+ A ++ G +HF G + R T +D YL + D+
Sbjct: 6 DFYSESFYLANNPDVAQAVDLG--VISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV 63
Query: 496 RNVFGSDRGA-AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ A +H+I G +E RNP F YI + I A +A D+ +H
Sbjct: 64 AALVNVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYP-FIQAAIEAGDI--TAIEH 120
Query: 554 FSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
F G E S+ +NP+ YL D+ D +HY+ G + R
Sbjct: 121 FVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAFLEV 180
Query: 612 FKSVMNLSEKSRDKADLSLS 631
S S D + S
Sbjct: 181 NGSSFPNRVASGDTRENSTI 200
Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 8/172 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
+ YL + D+ + H+I G + R P + L Y+ ++ D+ A
Sbjct: 8 YSESFYLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV--AA 65
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G HF NFG E R + F++ Y+ Y ++ + A H++ G
Sbjct: 66 LVNVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAG 125
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
E P Y + + A + +L G +H+ + G + R +
Sbjct: 126 QFEDFRPSVLYNPNYYLARNPDVAARVERDEL--TGIEHYLDIGAAQNRDFS 175
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDI 397
S E + Q L Y + D+ ++ +HF FG E R+
Sbjct: 31 SGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAIASGFQHFINFGQRERRNP 90
Query: 398 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLIN 454
+ F++ Y+ Y ++ + A H++ G E R + Y+A + D+
Sbjct: 91 SILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAA 150
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G +H+ + G + R +
Sbjct: 151 RVERDEL---TGIEHYLDIGAAQNRDFSA 176
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ +E A Q D + Y A D+ + +D ++H+ + G ++ RD
Sbjct: 115 ITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDF 174
Query: 398 T 398
+
Sbjct: 175 S 175
>gi|264678901|ref|YP_003278808.1| DMSO reductase [Comamonas testosteroni CNB-2]
gi|262209414|gb|ACY33512.1| putative DMSO reductase [Comamonas testosteroni CNB-2]
Length = 490
Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 83/234 (35%), Gaps = 28/234 (11%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y ++Y D+ + +H+Y G EGR+ F+S YL D+ +
Sbjct: 48 YLSTYGDVKNA----GIDPAEHYYYQGGREGRNPNYLFNSAYYLEDNPDV----AASGKN 99
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
HYI G EGR+P F Y A ++ IN + + G H+ G
Sbjct: 100 PLIHYIEFGENEGRSPSVYFDPAYYKAQLKEKINGESVLMHYITGGWRHY-------GPN 152
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
FD+ YL Y D+ + HYITHG +E R S +
Sbjct: 153 PFFDNRFYLDKYQDISDANSD----PLLHYITHGWREAREFHRVY------SFDTYKQEL 202
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
+ + ++ G + + + DD + + +A +H+
Sbjct: 203 TERLGELTEPLAYYLKVGRKSNDQLPKKNAPRVAVGDDGFRKSLELQQSAGEHF 256
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 27/175 (15%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYD 493
F Y++++ D+ NA D +H+ G EGR + +S YL
Sbjct: 39 KSGLFDKDWYLSTYGDVKNAGIDPA-------EHYYYQGGREGRNPNYLFNSAYYLEDNP 91
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
D+ HYI G EGR+P F Y A ++ IN ++
Sbjct: 92 DVAASG----KNPLIHYIEFGENEGRSPSVYFDPAYYKAQLKEKING--------ESVLM 139
Query: 553 HFSNFGYEE-GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
H+ G+ G + F+ YL Y D+ + S HYITHG +E R
Sbjct: 140 HYITGGWRHYGPNPFFDNRFYLDKYQDISDA----NSDPLLHYITHGWREAREFH 190
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD YL +Y D++N G D A HY G +EGRNP+ F + Y+ + D+ +
Sbjct: 43 FDKDWYLSTYGDVKNA-GID---PAEHYYYQGGREGRNPNYLFNSAYYLEDNPDVAASGK 98
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ FG EGR + FD Y + + + HYIT G
Sbjct: 99 NP-------LIHYIEFGENEGRSPSVYFDPAYYKAQLKEKI-----NGESVLMHYITGGW 146
Query: 516 KE-GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ G NP F Y+ ++D+ +A +D H+ G+ E R
Sbjct: 147 RHYGPNP-FFDNRFYLDKYQDISDANSDP-------LLHYITHGWREAREF 189
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 20/143 (13%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
E + + Y D+ + H+ EFG +EGR + F
Sbjct: 64 EHYYYQGGREGRNPNYLFNSAYYLEDNPDVAA----SGKNPLIHYIEFGENEGRSPSVYF 119
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D Y + + HYIT G + P+ F Y+ ++D+ +A +D
Sbjct: 120 DPAYYKAQ-----LKEKINGESVLMHYITGGWR-HYGPNPFFDNRFYLDKYQDISDANSD 173
Query: 459 APDLVQVGKDHFSNFGCEEGRFV 481
H+ G E R
Sbjct: 174 P-------LLHYITHGWREAREF 189
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 17/149 (11%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
+ F Y++++ D+ NA D + H+ G EGR+ FN YL
Sbjct: 38 KKSGLFDKDWYLSTYGDVKNAGIDPAE-------HYYYQGGREGRNPNYLFNSAYYLEDN 90
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALG--ISGMQFKSVMNLSEKSRDKADLSLSFDH 634
D+ + HYI G EGR+ +K+ + ++
Sbjct: 91 PDVA----ASGKNPLIHYIEFGENEGRSPSVYFDPAYYKAQLKEKINGESVLMHYITGGW 146
Query: 635 KKVDLYTDYFGDGNYYDSDLYSMHDINHD 663
+ + F D +Y + D N D
Sbjct: 147 RHYG--PNPFFDNRFYLDKYQDISDANSD 173
>gi|284050953|ref|ZP_06381163.1| phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
platensis str. Paraca]
Length = 723
Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 11/200 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D + Y+A++ D+ A ++ G +HF G + R T +D YL + D+
Sbjct: 6 DFYSESFYLANNPDVAQAV--DLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV 63
Query: 496 RNVFGSDRGA-AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ A +H+I G +E RNP F YI + I A +A D+ +H
Sbjct: 64 AALVNVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYP-FIQAAIEAGDI--TAIEH 120
Query: 554 FSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
F G E S+ +NP+ YL D+ D +HY+ G + R
Sbjct: 121 FVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAFLEV 180
Query: 612 FKSVMNLSEKSRDKADLSLS 631
S S D + S
Sbjct: 181 NGSNFPNRVASGDTRENSTI 200
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 8/172 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
+ YL + D+ + H+I G + R P + L Y+ ++ D+ A
Sbjct: 8 YSESFYLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV--AA 65
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G HF NFG E R + F++ Y+ Y ++ + A H++ G
Sbjct: 66 LVNVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAG 125
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
E P Y + + A + +L G +H+ + G + R +
Sbjct: 126 QFEDFRPSVLYNPNYYLARNPDVAARVERDEL--TGIEHYLDIGAAQNRDFS 175
Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDI 397
S E + Q L Y + D+ ++ +HF FG E R+
Sbjct: 31 SGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAIASGFQHFINFGQRERRNP 90
Query: 398 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLIN 454
+ F++ Y+ Y ++ + A H++ G E R + Y+A + D+
Sbjct: 91 SILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAA 150
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G +H+ + G + R +
Sbjct: 151 RVERDEL---TGIEHYLDIGAAQNRDFSA 176
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ +E A Q D + Y A D+ + +D ++H+ + G ++ RD
Sbjct: 115 ITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDF 174
Query: 398 T 398
+
Sbjct: 175 S 175
>gi|332295249|ref|YP_004437172.1| glycosyl transferase family 2 [Thermodesulfobium narugense DSM
14796]
gi|332178352|gb|AEE14041.1| glycosyl transferase family 2 [Thermodesulfobium narugense DSM
14796]
Length = 867
Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL SY D+R HYI G KE RNP+ F+ Y+ + D++ +
Sbjct: 23 FDEIYYLKSYPDVRAA----DIDPIEHYILFGAKERRNPNIYFQTGFYLDKYPDMVQSGI 78
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ H+ FG +EGR + F+ + YL + D+ R HYI G
Sbjct: 79 NP-------LLHYILFGAKEGRWPNPEFDSEYYLLANPDVKKA----RLNPLLHYILFGQ 127
Query: 600 KEGRALGISGMQ 611
KEGR ++
Sbjct: 128 KEGRKTKGDNVE 139
Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 18/144 (12%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDS 401
L+ + + Y SY D+ + ++H+ FG E R+ F +
Sbjct: 8 LKLYKRRHTIKKSGLFDEIYYLKSYPDVRAA----DIDPIEHYILFGAKERRNPNIYFQT 63
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 460
YL Y D+ HYI G KEGR P+ F + Y+ ++ D+ A +
Sbjct: 64 GFYLDKYPDMVQ----SGINPLLHYILFGAKEGRWPNPEFDSEYYLLANPDVKKARLNP- 118
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFD 484
H+ FG +EGR D
Sbjct: 119 ------LLHYILFGQKEGRKTKGD 136
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 21/136 (15%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
F + Y+ S+ D+ A D +H+ FG +E R F + YL Y
Sbjct: 19 KSGLFDEIYYLKSYPDVRAADIDP-------IEHYILFGAKERRNPNIYFQTGFYLDKYP 71
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
D+ HYI G KEGR P+ F + Y+ ++ D+ A +
Sbjct: 72 DMVQSG----INPLLHYILFGAKEGRWPNPEFDSEYYLLANPDVKKARLNP-------LL 120
Query: 553 HFSNFGYEEGRSITFN 568
H+ FG +EGR +
Sbjct: 121 HYILFGQKEGRKTKGD 136
>gi|209528057|ref|ZP_03276536.1| Phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
maxima CS-328]
gi|209491513|gb|EDZ91889.1| Phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
maxima CS-328]
Length = 723
Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 11/200 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D + Y+A++ D+ A ++ G +HF G + R T +D YL + D+
Sbjct: 6 DFYSESFYLANNPDVAQAV--DLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV 63
Query: 496 RNVFGSDRGA-AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ A +H+I G +E R+P F YI + I A +A D+ +H
Sbjct: 64 AALVNVGAIASGFQHFINFGQREARDPSILFNTDFYINEYP-FIQAAIEAGDI--TAIEH 120
Query: 554 FSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
F G E S+ +NP+ YL D+ D +HY+ G + R
Sbjct: 121 FVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAFLEV 180
Query: 612 FKSVMNLSEKSRDKADLSLS 631
S S D + S
Sbjct: 181 NGSSFPNRVASGDTRENSTI 200
Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 8/172 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
+ YL + D+ + H+I G + R P + L Y+ ++ D+ A
Sbjct: 8 YSESFYLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV--AA 65
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G HF NFG E R + F++ Y+ Y ++ + A H++ G
Sbjct: 66 LVNVGAIASGFQHFINFGQREARDPSILFNTDFYINEYPFIQAAIEAGDITAIEHFVKAG 125
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
E P Y + + A + +L G +H+ + G + R +
Sbjct: 126 QFEDFRPSVLYNPNYYLARNPDVAARVERDEL--TGIEHYLDIGAAQNRDFS 175
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDI 397
S E + Q L Y + D+ ++ +HF FG E RD
Sbjct: 31 SGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAIASGFQHFINFGQREARDP 90
Query: 398 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLIN 454
+ F++ Y+ Y ++ + A H++ G E R + Y+A + D+
Sbjct: 91 SILFNTDFYINEYPFIQAAIEAGDITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAA 150
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G +H+ + G + R +
Sbjct: 151 RVERDEL---TGIEHYLDIGAAQNRDFSA 176
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ +E A Q D + Y A D+ + +D ++H+ + G ++ RD
Sbjct: 115 ITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDF 174
Query: 398 T 398
+
Sbjct: 175 S 175
>gi|126741108|ref|ZP_01756790.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
gi|126717872|gb|EBA14592.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
Length = 284
Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ + +A+ L YW + +++++ +I+ L Q++ARWA W V ++
Sbjct: 152 SLDDLANFLT-HGYWGGS--SRSFNTSGSNQITVNISGLTAAGQQLARWAFEAWEAVANI 208
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNALH 126
F ET + I F +++G + + + + W G + +H
Sbjct: 209 DFVETLGSAQITFDDNDSGAYASSSTSGTTILSSEVNVSTAWLANSGTTIDSYSFSTYVH 268
Query: 127 EIGHALGLMHPGSYNG 142
EIGHALGL H G YNG
Sbjct: 269 EIGHALGLGHQGDYNG 284
>gi|194886655|ref|XP_001976657.1| GG19900 [Drosophila erecta]
gi|190659844|gb|EDV57057.1| GG19900 [Drosophila erecta]
Length = 584
Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 94/270 (34%), Gaps = 44/270 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A+ W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAEQWTIGSHRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G P + +D D ++ S + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSAALMAPFYRGFEPSFKLD-----DDDKAAIQSLYGKKSYPLRP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y AT Q+ Y PK L ++I K Q Y GD LT
Sbjct: 277 TNVYPAT--------TQRPYTPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLT 328
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y L ++ W G N+ A
Sbjct: 329 TDSVEEGYPQLISKGWP---GLPANIDAAF 355
>gi|194754836|ref|XP_001959700.1| GF11910 [Drosophila ananassae]
gi|190620998|gb|EDV36522.1| GF11910 [Drosophila ananassae]
Length = 585
Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 97/270 (35%), Gaps = 43/270 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+AR A WS+ DLTF +
Sbjct: 109 YALQGSRWRVKNLTYKISKYPKRLKRVDVDA------EIAR-AFAVWSEDTDLTFTRKTS 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQLKP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLT 234
+ Y T ++ + PK L ++I K Q Y GD LT
Sbjct: 277 TNFYPPT-------TLRPAFTPPKVPLDDSICKDSKVDTLFNSAQGDTYAFKGDKYYKLT 329
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y ++ W G N+ A
Sbjct: 330 TDSVEEGYPQAISKGWP---GLPGNIDAAF 356
>gi|170750033|ref|YP_001756293.1| glycosyl transferase group 1 [Methylobacterium radiotolerans JCM
2831]
gi|170656555|gb|ACB25610.1| glycosyl transferase group 1 [Methylobacterium radiotolerans JCM
2831]
Length = 1044
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/281 (23%), Positives = 91/281 (32%), Gaps = 44/281 (15%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSY 402
R AD Y Y D++ + + H+ G EGR F
Sbjct: 41 RQADLVRAVKESGLFDPAWYARRYPDVVG----EGIDPAVHYAVHGGREGRWPHPLFHGD 96
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH--EDLINAFADA 459
LYL S LR ++ HY+ G G P+ F Y + A A +
Sbjct: 97 LYLDSVPGLR----AEGTNPLLHYLDRGAAAGIRPNPLFDPDWYATRYLGGAEHRARAFS 152
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG- 518
L + D FD+ YL Y D R G+ A H+ G K+G
Sbjct: 153 DFLSRTDTDP----------SPQFDTAWYLSRYPDARAAGGN----ALSHFYETGRKQGY 198
Query: 519 -RNPDAFKALEY----IASHEDLINAF--ADAPDLVQAGKD---HFSNFG--YEEGRSIT 566
RNP+ F L I AF A P+ +G + H+ G
Sbjct: 199 LRNPEEFAGLSRHVDLIRRSGLFDAAFYRARCPEAETSGLEPLEHYVMAGGYRRYAPHPL 258
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
F+PD Y +D HY+ HG EG G
Sbjct: 259 FDPDWYAAQ----SAAVRADSLNPLVHYLEHGAAEGLDPGP 295
Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 57/298 (19%), Positives = 95/298 (31%), Gaps = 36/298 (12%)
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT +Y + + NA+ + KQ +L + E + +D + RS L
Sbjct: 167 DTAWYLSRYPDAR-AAGGNALSHFYETGRKQGYLRNPEEFAGLSRHVDLIR---RSGLFD 222
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAA 422
A Y E ++H+ G FD Y +D
Sbjct: 223 AAFYRARCPEAETSGLEPLEHYVMAGGYRRYAPHPLFDPDWYAAQ----SAAVRADSLNP 278
Query: 423 ARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR-- 479
HY+ HG EG +P F Y + A + HF G GR
Sbjct: 279 LVHYLEHGAAEGLDPGPWFDTRWYTETFLGDDAAGQNP-------LAHFLADG---GRTT 328
Query: 480 --FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
FD+ Y Y + + Y+T G++ GR + + +
Sbjct: 329 SPSPRFDAPWYRARYPKVAALG----LNPLIDYVTTGLEAGRLTRRVPGAAVPEASDARL 384
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD----DLWNVFGSDRSAAA 591
+ + + G+ EGR I + + YL ++ DL + +D+ A
Sbjct: 385 SCL--KREARRHGRTALFITHCPEGR-IRGHVEPYLRAFAENGTDLVLIIAADQHKNA 439
>gi|195380117|ref|XP_002048817.1| GJ21109 [Drosophila virilis]
gi|194143614|gb|EDW60010.1| GJ21109 [Drosophila virilis]
Length = 587
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 97/264 (36%), Gaps = 42/264 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+AR A WS+ DLTF +
Sbjct: 112 YALQGSRWRVKNLTYKISKYPKRLKRNDVDA------EIAR-AFAVWSEDTDLTFTRKTS 164
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 165 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 224
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D + ++ S + + +
Sbjct: 225 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDK-----AAIQSLYGRKTNQYTP 279
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE--VQQKDSPFIQTIYDSGGDDLLDL 233
+ Y + + + PK L ++I K +S +T Y GD L
Sbjct: 280 TNVYPPS-------THRPSFTPPKVPLDDSICKDSKIDTLFNSANGET-YAFKGDKYYKL 331
Query: 234 TLIGGVKNYIDLNTESWSSIGGYE 257
T + Y L ++ W + G
Sbjct: 332 TTDSVEEGYPQLISKGWPGLPGNI 355
>gi|188583181|ref|YP_001926626.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
gi|179346679|gb|ACB82091.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
Length = 1264
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 23/207 (11%)
Query: 363 EYTASYEDLIQVI-GQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDR 419
Y Y ++ ++ G F+ +KH+ + G++ G D F + Y+ D+
Sbjct: 32 HYITKYPEVARLAKGDSNFDPVKHYMQHGVAAGYDPHPEFSTSYYIQLNPDVVAA----N 87
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
HYI +G +EGR P E+IA +++ D+ ++ E
Sbjct: 88 QNPFFHYIMYGAEEGRRPK--HGKEFIALSGEIVRGQTDSSTAFTDTGGEIYDYIKGE-- 143
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
FD+ Y Y+D+ + G HYI G EGR+P F Y+ + D+
Sbjct: 144 ---FDADYYKSKYNDIEAHCEINPGFDCVHHYIECGAAEGRDPSRVFSTQHYLEVNSDVR 200
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRS 564
NA + HF G EGR+
Sbjct: 201 NASINP-------FYHFVKHGQTEGRT 220
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 67/200 (33%), Gaps = 19/200 (9%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDL 495
+ F YI + ++ A D H+ G G F + Y+ D+
Sbjct: 26 NKFDRAHYITKYPEV--ARLAKGDSNFDPVKHYMQHGVAAGYDPHPEFSTSYYIQLNPDV 83
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ HYI +G +EGR P E+IA +++ D+
Sbjct: 84 VAANQN----PFFHYIMYGAEEGRRPK--HGKEFIALSGEIVRGQTDSSTAFTDTGGEIY 137
Query: 556 NFGYEEGRSITFNPDLYLTSYDDL-WNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
++ E F+ D Y + Y+D+ + + HYI G EGR F +
Sbjct: 138 DYIKGE-----FDADYYKSKYNDIEAHCEINPGFDCVHHYIECGAAEGRD---PSRVFST 189
Query: 615 VMNLSEKSRDKADLSLSFDH 634
L S + F H
Sbjct: 190 QHYLEVNSDVRNASINPFYH 209
>gi|220926123|ref|YP_002501425.1| family 2 glycosyl transferase [Methylobacterium nodulans ORS 2060]
gi|219950730|gb|ACL61122.1| glycosyl transferase family 2 [Methylobacterium nodulans ORS 2060]
Length = 872
Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 28/201 (13%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
FD Y+ D+ HY+ +G KE R+P+ F + Y+ ++ D+ +
Sbjct: 127 TPFFDYRHYIQLNPDVAEA----GVHPLLHYLKYGWKEYRDPNPYFHSEWYLKAYSDVAH 182
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A + H+ G EGR FD YL D+ + HYIT
Sbjct: 183 ANINP-------LVHYVMSGIHEGRQPHYLFDLSYYLAGAPDVA----GSKMNPWLHYIT 231
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPD 570
+G +EGR+ +Y + + +L+ H+S FG +S F+P
Sbjct: 232 YGDREGRSGHPLFNPDYYCAQ--------NKSELIDLPFAHYSMFGSVSDKSPCPAFDPT 283
Query: 571 LYLTSYDDLWNVFGSDRSAAA 591
Y Y + + G
Sbjct: 284 HYRLLYPESLSRRGEPLLDYL 304
Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 67/196 (34%), Gaps = 29/196 (14%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
Y D+ + + H+ ++G E RD F S YL +Y D+
Sbjct: 126 PTPFFDYRHYIQLNPDVAEA----GVHPLLHYLKYGWKEYRDPNPYFHSEWYLKAYSDVA 181
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ HY+ G+ EGR P F Y+A D+ + + H+
Sbjct: 182 HA----NINPLVHYVMSGIHEGRQPHYLFDLSYYLAGAPDVAGSKMNP-------WLHYI 230
Query: 472 NFGCEEGRF--VTFDSYLYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKAL 527
+G EGR F+ Y +L ++ HY G ++P AF
Sbjct: 231 TYGDREGRSGHPLFNPDYYCAQNKSELIDL-------PFAHYSMFGSVSDKSPCPAFDPT 283
Query: 528 EYIASHEDLINAFADA 543
Y + + ++ +
Sbjct: 284 HYRLLYPESLSRRGEP 299
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 82/251 (32%), Gaps = 31/251 (12%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + L G ++++HF+ G + FD Y +
Sbjct: 16 FDHQHYLLNVAPGLGEVDAVEHFFSVGQYRNFTFNPFFDPLWYAH-----TSGQSGTTVE 70
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASH--EDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
Y++ +P Y+ +H +++ H
Sbjct: 71 LFESYLSRTNDILESPHPLFDGSYLTAHLGDEVQENLLVYFMRYAGSMPHCVPVSP---- 126
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD Y+ D+ HY+ +G KE R+P+ F + Y+ ++ D+ +
Sbjct: 127 TPFFDYRHYIQLNPDVAEAGVH----PLLHYLKYGWKEYRDPNPYFHSEWYLKAYSDVAH 182
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
A + H+ G EGR F+ YL D+ + HYIT
Sbjct: 183 ANINP-------LVHYVMSGIHEGRQPHYLFDLSYYLAGAPDVA----GSKMNPWLHYIT 231
Query: 597 HGMKEGRALGI 607
+G +EGR+
Sbjct: 232 YGDREGRSGHP 242
>gi|317970592|ref|ZP_07971982.1| VBCS repeat-containing protein [Synechococcus sp. CB0205]
Length = 289
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 80/232 (34%), Gaps = 49/232 (21%)
Query: 163 MSYFMPQDSMM------DASFGYCATPMVSDIVAVQKIY-----------GAPKGSLGNN 205
MSY + D + TP D +A+ IY G + G+
Sbjct: 1 MSYVSQDIAGKLGVKDTDGVWLLNLTPRTLDFLALDSIYAKQTDSEGRPFGTSRAFNGDT 60
Query: 206 IYKIEVQQK--------------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-- 249
Y + TI D G D LD + + IDL +
Sbjct: 61 RYGFGSTISEEESVVYAGLNELYNYRVALTIADGSGIDTLDFSGYT-KSSLIDLYVMTGD 119
Query: 250 -----WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--------- 295
+S I G N+++A TVIE+ +G G+D++ N NNV + GN
Sbjct: 120 EYKTRFSQINGSLNNLSLAVGTVIENAIGGYGDDILKDNQFNNVLIGNDGNDRFEVSSGY 179
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRF 346
DV G +G+D + Y I + V + Q L +E + F
Sbjct: 180 DVITGGAGVDRVMVAGEAGDYLIGSIDPVTTVLRTRDGASQLVLKGIEFIEF 231
>gi|78183644|ref|YP_376078.1| peptidase, metallopeptidase [Synechococcus sp. CC9902]
gi|78167938|gb|ABB25035.1| Peptidase, metallopeptidases [Synechococcus sp. CC9902]
Length = 421
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 89/279 (31%), Gaps = 34/279 (12%)
Query: 67 DLTFEETSIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI------GKGTI 119
D F +D+ F+ + N W + G
Sbjct: 78 DFNFTSNQSTADVAIFLDTEISLDDGGDTLGLAVSNRNNSNGYFWEIFLNEPKFDGDQDY 137
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
+ +HEIGH LGL HP N G V G+ + +++ +VM+Y P + +
Sbjct: 138 FRYALIHEIGHTLGLEHPFEDNDGDVVDGITDPWKSLYPEDTVMAYRNPAN------GRW 191
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+D A+ +++G + +K + + DS +
Sbjct: 192 PNDYTSNDKAALIELWGQETNPTPSVT-----PEKPNGLSAQVMDS---NSTRFKGTSKA 243
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I G + N TI + + G GND + GN+ N+ G+D+
Sbjct: 244 DWII-----------GNDGNNTIKAKGGNDYLQGGLGNDRLNGNNGNDTLRGGDGDDIIH 292
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
G G D + + +Y + D +
Sbjct: 293 GGKGSDIIRGGRGADV--LYGNSGQNTFSSTADGSTDII 329
>gi|152993316|ref|YP_001359037.1| hypothetical protein SUN_1733 [Sulfurovum sp. NBC37-1]
gi|151425177|dbj|BAF72680.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 1395
Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats.
Identities = 60/315 (19%), Positives = 110/315 (34%), Gaps = 52/315 (16%)
Query: 364 YTASYEDLIQVIGQDVFE-SMKHFYEFGLSE--------GRDI-TFDSYLYLGSYDDLRN 413
Y + D+ + I + FE ++ H FGL E +D+ ++ YL S+ + +
Sbjct: 27 YLEANPDVRKAIKEGQFEDAVHHLKVFGLKEIEEGERKFHKDLDAYNESDYLNSFPEAKV 86
Query: 414 VFGSD-RGAAARHYITHGVKEGRNPDAFKALE-------------YIASHEDLINAFADA 459
++ + H+ G + + F E I + D
Sbjct: 87 ALENEEVSSIFEHFCKVGYQNIVSSVNFDKYEEKDGENIEESDKLTIEPYFDKEWYQKMF 146
Query: 460 PDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+HF +G EG+ FD YL Y D++ H+I G E
Sbjct: 147 NVYDICPIEHFLRYGSFEGKNPNPDFDVEWYLNEYPDVKESG----LNPFIHFIQFGKAE 202
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQA-------GKDHFSNFGYEEGRSIT--FN 568
G+ + +Y+ + +I + D + +HF +G EG++ F+
Sbjct: 203 GKFQNP--DEKYLQENIKIIEPYFDKEWYQKMFNVYDICPIEHFLRYGSFEGKNPNPDFD 260
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR-------ALGISGMQFKSVMNLSEK 621
+ YL Y D+ + H+I G EGR I + K +E
Sbjct: 261 VEWYLNEYPDVKESSLNSFV----HFIQFGKVEGRFQNVDEKDRSILNQKIKKYFQRAEN 316
Query: 622 SRDKADLSLSFDHKK 636
+ ++ +HK+
Sbjct: 317 NIIDLNIDSEKEHKE 331
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 52/162 (32%), Gaps = 35/162 (21%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR----- 395
+E + Y Y D+ + HF +FG +EG+
Sbjct: 154 IEHFLRYGSFEGKNPNPDFDVEWYLNEYPDVKE----SGLNPFIHFIQFGKAEGKFQNPD 209
Query: 396 -----------DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 443
+ FD Y + +F H++ +G EG+NP+ F
Sbjct: 210 EKYLQENIKIIEPYFDKEWY-------QKMFNVYDICPIEHFLRYGSFEGKNPNPDFDVE 262
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y+ + D+ + + HF FG EGRF D
Sbjct: 263 WYLNEYPDVKESSLN-------SFVHFIQFGKVEGRFQNVDE 297
>gi|257796209|dbj|BAI39458.1| putative glycosyltransferase [Gluconacetobacter intermedius]
Length = 983
Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 84/279 (30%), Gaps = 19/279 (6%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLY 404
+D + Y A + ++ ++ ++ + G + G FD Y
Sbjct: 5 SDNAEMAAGWATFDPAWYYARHAAMLDLMDIPPEQAQAFYEAHGAALGHSPNPFFDEDWY 64
Query: 405 LGSYDDLRN-VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+Y D+ V + HY+ G+ F Y+A++ D+ A A
Sbjct: 65 RATYPDVAQQVLAGTWHSGFDHYLNAGLDTHDPHWLFDTRTYLAAYPDITPATLAAGGYR 124
Query: 464 QVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK--EGR 519
DH+ G E R FD YL L Y+ G+ R
Sbjct: 125 NA-YDHYLRTGDGEMRSGSCFFDPETYLAL---LAECQHDTITHPFADYLRRGMAALPCR 180
Query: 520 NPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS--NFGYEEGRSITFNPDLYLTSY 576
+ F A Y ++ D + + H+ F+ Y
Sbjct: 181 SVSLYFDAEWYAQTYPDAHADITQG--MWRGALHHYLCNTTPQAFDPGPFFSESFYAMVN 238
Query: 577 DDLWNVF-GSDRSAAAQHYITHGMKEGRA--LGISGMQF 612
D+ + H+++ G+ E R + Q+
Sbjct: 239 PDVLGAIEAGNLRNGYAHFLSDGVHEQRKPCSTLDLAQY 277
>gi|148259629|ref|YP_001233756.1| glycosyl transferase, group 1 [Acidiphilium cryptum JF-5]
gi|146401310|gb|ABQ29837.1| glycosyl transferase, group 1 [Acidiphilium cryptum JF-5]
Length = 1247
Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 69/233 (29%), Gaps = 39/233 (16%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
E A Y +D+ + + F G G F
Sbjct: 9 EDPDLAGDIAAIRPSGLFDPGHYALQAQDMPA-----GTDPLTDFCRRGWRAGHRPNPYF 63
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH--EDLINAF 456
D YL D+ + RHYI G +EGR+P F A Y ++ D NA
Sbjct: 64 DPAFYLARNPDI----AASGANPLRHYIDFGDREGRDPSPLFHAGWYRETYGIPDGANAL 119
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
AD + GK FD YL + D+ H+ G
Sbjct: 120 ADFLSRRRTGKV---------SPVPLFDPQWYLDNNPDVAAAGSD----PFEHFCAFGAA 166
Query: 517 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF---GYEEGRSI 565
E R+P F Y A + D I P L H+ G+ R
Sbjct: 167 ERRDPSPDFDIGFYAARYADEIA--GGNPFL------HYLAHRGGGFHPRRPA 211
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 52/179 (29%), Gaps = 30/179 (16%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F Y +D+ D F G G FD YL
Sbjct: 21 RPSGLFDPGHYALQAQDMPAGTDPLTD--------FCRRGWRAGHRPNPYFDPAFYLARN 72
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH---EDLINAFADAPDLVQA 549
D+ + RHYI G +EGR+P + D NA AD +
Sbjct: 73 PDIAASGAN----PLRHYIDFGDREGRDPSPLFHAGWYRETYGIPDGANALADFLSRRRT 128
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
GK F+P YL + D+ S +H+ G E R
Sbjct: 129 GKV---------SPVPLFDPQWYLDNNPDVAAA----GSDPFEHFCAFGAAERRDPSPD 174
>gi|17227860|ref|NP_484408.1| hypothetical protein all0364 [Nostoc sp. PCC 7120]
gi|17129709|dbj|BAB72322.1| all0364 [Nostoc sp. PCC 7120]
Length = 900
Score = 107 bits (266), Expect = 8e-21, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 75/194 (38%), Gaps = 16/194 (8%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG N+ Y + T+ DS G D ++ I +Y++LN S S +
Sbjct: 478 LYG--DADTINDTY-FYTNEYGFYGSTTLTDSSGTDTINAAAIT-ADSYLNLNPGSTSIL 533
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G +TI+ T IE+ G GND +IGNSA NV GND DG G DT +
Sbjct: 534 NGTV--LTISTGTTIENAFGGDGNDTIIGNSAANVLHGGRGNDTLDGGVGNDTLRGGRGN 591
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS--------DVERLRFADQCIDSVNVKQ-RSILEY 364
Y I I+ +ANE S +VE L + + +
Sbjct: 592 DTY-IVNSTGDIVTENANEGIDTVQSSVTYTLGANVENLTLTGTGAINGTGNSLNNTITG 650
Query: 365 TASYEDLIQVIGQD 378
+ L G D
Sbjct: 651 NSGNNTLNGDAGND 664
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 10/189 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVKNYIDLNTESWSSIGGY 256
G GN+ Y + I T + G D + + +G + L + G
Sbjct: 587 GGRGNDTYIVNSTGD----IVTENANEGIDTVQSSVTYTLGANVENLTLTGTGAINGTGN 642
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N TI ++ ++ G +GND +I + N++ +GND G G DT+ +
Sbjct: 643 SLNNTITGNSGNNTLNGDAGNDFLIAGNGNDILNGGTGNDTMLGGGGNDTYIVDSIGD-- 700
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTASYEDLIQVI 375
+ N + + +E L + + +++ + L
Sbjct: 701 YVLENANQGTDLVQSSISYTLGNSLENLTLTGTSAINGTGNRLNNVITGNSGNNTLNGGD 760
Query: 376 GQDVFESMK 384
G D
Sbjct: 761 GNDTLNGSA 769
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 61/178 (34%), Gaps = 11/178 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYD------SGGDDLLDLT---LIGGVKNYIDLNTES 249
G GN+ + D+ + +I D + G DL+ + +G + L S
Sbjct: 676 NGGTGNDTM-LGGGGNDTYIVDSIGDYVLENANQGTDLVQSSISYTLGNSLENLTLTGTS 734
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N I ++ ++ G GND + G++ + +GND+ G +G DT
Sbjct: 735 AINGTGNRLNNVITGNSGNNTLNGGDGNDTLNGSAGVDTLLGGNGNDILVGGTGNDTLTG 794
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ I D + V F + + L +A+
Sbjct: 795 GVGRDRFTFNSRSEGIDRITDFNVVDDTIV-VSAAGFGGGLVVGAAIASSQFLLGSAA 851
>gi|326403402|ref|YP_004283483.1| putative glycosyltransferase [Acidiphilium multivorum AIU301]
gi|325050263|dbj|BAJ80601.1| putative glycosyltransferase [Acidiphilium multivorum AIU301]
Length = 1247
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 69/233 (29%), Gaps = 39/233 (16%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
E A Y +D+ + + F G G F
Sbjct: 9 EDPDLAGDIAAIRPSGLFDPGHYALQAQDMPA-----GTDPLTDFCRRGWRAGHRPNPYF 63
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH--EDLINAF 456
D YL D+ + RHYI G +EGR+P F A Y ++ D NA
Sbjct: 64 DPAFYLARNPDI----AASGANPLRHYIDFGDREGRDPSPLFHAGWYRETYGIPDGANAP 119
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
AD + GK FD YL + D+ H+ G
Sbjct: 120 ADFLSRRRTGKV---------SPVPLFDPQWYLDNNPDVAAAGSD----PFEHFCAFGAA 166
Query: 517 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF---GYEEGRSI 565
E R+P F Y A + D I P L H+ G+ R
Sbjct: 167 ERRDPSPDFDIGFYAARYADEIA--GGNPFL------HYLAHRGGGFHPRRPA 211
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 52/177 (29%), Gaps = 26/177 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F Y +D+ D F G G FD YL
Sbjct: 21 RPSGLFDPGHYALQAQDMPAGTDPLTD--------FCRRGWRAGHRPNPYFDPAFYLARN 72
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D+ + RHYI G +EGR+P + + PD A D
Sbjct: 73 PDIAASGAN----PLRHYIDFGDREGRDPSPLFHAGWYRETYGI-------PDGANAPAD 121
Query: 553 HFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
S + + F+P YL + D+ S +H+ G E R
Sbjct: 122 FLSRRRTGKVSPVPLFDPQWYLDNNPDVAAA----GSDPFEHFCAFGAAERRDPSPD 174
>gi|146329811|ref|YP_001209158.1| calcium-binding domain-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146233281|gb|ABQ14259.1| calcium binding domain protein [Dichelobacter nodosus VCS1703A]
Length = 482
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/322 (19%), Positives = 110/322 (34%), Gaps = 63/322 (19%)
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
A HE+ H+LGL HP + P E+DS S+MSY + F
Sbjct: 56 DSWLTAAHELLHSLGLTHPFKEDNMPPHKKFLTVEEDDSMGVSIMSY------QDNYDFV 109
Query: 179 YCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT-IYDSG---------- 226
+ D+ + YG K G+++Y + + I+D G
Sbjct: 110 GAKDFRIFDLAYLHYRYGVSKTARAGDDVYSFKTFNQSCADNDIYIWDGGGIDTFDASQE 169
Query: 227 -------------------------------------GDDLLD---LTLIGGVKNYIDLN 246
G D + + + K+ I+
Sbjct: 170 ENSVYVNLTPGSWIYSGEKLDKFAVKENFVRDIHDFLGKDSITTEAVAVGNVEKSKINFI 229
Query: 247 TESWSSIGG---YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+++ I E I +T IE + GS+ NDV+IGN A+N F +G+D DG G
Sbjct: 230 P-TFNRILNCDFTEGQAFIGFYTQIERLKGSAFNDVLIGNKADNQIFGGAGDDKIDGGEG 288
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + + + IV D + + S ++ + ++ ++ K I+
Sbjct: 289 DDYLDGGLGVDILRGGEGNDIYIVDDNRDEIIELGSGIDTV-YSSATDYTLADKVEHIVL 347
Query: 364 YTASYEDLIQVIGQDVFESMKH 385
T + + + +F +
Sbjct: 348 LTGARNAIGNALDNKLFGNSGD 369
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 67/220 (30%), Gaps = 43/220 (19%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I+ GDD +D G +Y+D GG ++ I
Sbjct: 261 FNDVLIGNKADNQIFGGAGDDKIDG---GEGDDYLDGGLGVDILRGGEGNDIYIVDDNRD 317
Query: 269 ESVVGSSGNDVV-------------------------IGNSANNVFFESSGNDVFDGS-- 301
E + SG D V IGN+ +N F +SG+++ +G
Sbjct: 318 EIIELGSGIDTVYSSATDYTLADKVEHIVLLTGARNAIGNALDNKLFGNSGDNILEGGDG 377
Query: 302 -------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
G DT A + + I + I + K D L + +
Sbjct: 378 DDILIGGGGNDTLIGGAGNDQFFIDCTLDGDITTIKDFQKGDKLQLNHEI------FKEL 431
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ +++ +Y E+ ++ + F E
Sbjct: 432 SQDTQNLQDYLIYDEESGELFYDSDGSGIADPIHFATIEN 471
>gi|195430660|ref|XP_002063372.1| GK21871 [Drosophila willistoni]
gi|194159457|gb|EDW74358.1| GK21871 [Drosophila willistoni]
Length = 597
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/280 (22%), Positives = 94/280 (33%), Gaps = 59/280 (21%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS DLTF +
Sbjct: 114 YALQGSRWRVKALTYKISKYPKRLKRADVDA------EIGR-AFAVWSLDTDLTFTRKTS 166
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 167 GPVHIEIKFVEGEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSSRGTNLFQV 226
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYE-----------NDSFLTSVMS 164
A HE GH+LGL H Y G PV+ +D+D + ++ + +
Sbjct: 227 AAHEFGHSLGLSHSDQSSALMAPFYRGYEPVFKLDDDDKAAIQSLYGRKTTNTNQYT-PT 285
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
+ P + SF TP+ I KI + G+ Y
Sbjct: 286 FNSPPSTQRPTSFTPPRTPLDDSICKDSKIDTIFNSAHGDT-----------------YA 328
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
GD LT + Y L ++ W G N+ A
Sbjct: 329 FKGDKFYKLTTDAVEEGYPQLISKGWP---GLPSNIDAAF 365
>gi|170743484|ref|YP_001772139.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
gi|168197758|gb|ACA19705.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
Length = 1265
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 79/234 (33%), Gaps = 36/234 (15%)
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD----------- 438
GRD FD Y Y DL G +R A HY+ HG EGR P
Sbjct: 40 SWRFGRD-AFDPDFYAQLYPDLS---GLNRHALREHYVRHGRAEGRFPTRDAYLADLTAR 95
Query: 439 ------AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
F Y + DL F HF G EE R D ++
Sbjct: 96 HGALPEDFNPGLYGDLNPDLARRFTRDWQFTA----HFLKHGREEKRLYALDIAAEAETF 151
Query: 493 DDLRNVFGSDRGAAARHYI-THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
L + A ++ HG+ GR F ++I + D + A P G
Sbjct: 152 ARLAGAEPREGLALFTGFLAAHGLAPGRWLRRFDLAQFIHLNADWLPA---PPRTRAEGI 208
Query: 552 DHFSNFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
F G + I F+P Y +Y +D +A +H++ G+++
Sbjct: 209 RLFVEQGIDRLAPIRTDAIFDPAFYRATY---RAEGAADDAALYRHWLRQGIEQ 259
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
+ GR F+PD Y Y DL G +R A +HY+ HG EGR
Sbjct: 41 WRFGRD-AFDPDFYAQLYPDLS---GLNRHALREHYVRHGRAEGRFPTRDAY 88
>gi|254504843|ref|ZP_05116994.1| hypothetical protein SADFL11_4882 [Labrenzia alexandrii DFL-11]
gi|222440914|gb|EEE47593.1| hypothetical protein SADFL11_4882 [Labrenzia alexandrii DFL-11]
Length = 332
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 18/136 (13%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLY 404
+ +V + Y +D+ + + H+ FG EGRD FD+ Y
Sbjct: 207 SGIRTSAVLHAGVDEVFYLQENDDVAAA----MLDGSAHYNTFGWREGRDPNGWFDTDWY 262
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLV 463
L D+ HY+ HG +EGR+P F Y+ ++ D+ NA D
Sbjct: 263 LAQNTDVAAA----DINPLTHYLDHGWREGRSPSEYFDGDRYLTANTDVANAGIDP---- 314
Query: 464 QVGKDHFSNFGCEEGR 479
H FG EGR
Sbjct: 315 ---LSHMLMFGLAEGR 327
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 28/179 (15%)
Query: 442 ALEYIASHEDLINAFADAPDLVQ--VGKDHFSNFGCEEGR--------FVTFDSYLYLGS 491
L+Y+ E + G +H G EG D YL
Sbjct: 168 VLQYLEEAELELKCLGFTAFNFTNPEGTNHCEETGLVEGSGIRTSAVLHAGVDEVFYLQE 227
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAG 550
DD+ HY T G +EGR+P+ F Y+A + D+ A +
Sbjct: 228 NDDVAAAMLDGSA----HYNTFGWREGRDPNGWFDTDWYLAQNTDVAAADINP------- 276
Query: 551 KDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
H+ + G+ EGRS + F+ D YLT+ D+ N H + G+ EGR G+
Sbjct: 277 LTHYLDHGWREGRSPSEYFDGDRYLTANTDVANA----GIDPLSHMLMFGLAEGRDWGL 331
>gi|195153567|ref|XP_002017696.1| GL17167 [Drosophila persimilis]
gi|198460451|ref|XP_001361721.2| GA18484 [Drosophila pseudoobscura pseudoobscura]
gi|194113492|gb|EDW35535.1| GL17167 [Drosophila persimilis]
gi|198137022|gb|EAL26300.2| GA18484 [Drosophila pseudoobscura pseudoobscura]
Length = 586
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 94/263 (35%), Gaps = 40/263 (15%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + YK D+ E+ R A WS+ DLTF + +
Sbjct: 109 YALQGSRWRVKNLTYKVSKYPKRLKRVDVDA------EIGR-AFAVWSEDTDLTFTKKTT 161
Query: 76 ---HSDIKF---------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H +IKF G + + + +FD A++W G +GT L
Sbjct: 162 GPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQV 221
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A HE GH+LGL H Y G PV+ +D D ++ S + + + +
Sbjct: 222 AAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFRLD-----DDDKAAIQSLYGKKTNQLKP 276
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
+ Y + + + PK L ++I K Q Y GD LT
Sbjct: 277 TNTYPPSTQ-------RPSFTPPKVPLDDSICKDSKIDTLFNSAQGETYAFKGDKYYKLT 329
Query: 235 LIGGVKNYIDLNTESWSSIGGYE 257
+ Y L ++ W + G
Sbjct: 330 TDSVEEGYPQLISKGWPGLPGNI 352
>gi|83582760|ref|YP_425066.1| hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
gi|83578076|gb|ABC24626.1| Hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
Length = 462
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 15/173 (8%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F Y+ + D+ A + G +HF +G EGR FD+ YL D+
Sbjct: 7 SFFNEEFYLRVYSDVAEAVKQGA--ISSGYEHFLRYGMAEGRNPNRFFDTAYYLNQNPDV 64
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+V + A H++ +G E R+P AF +++ ++ + + +L G HF
Sbjct: 65 ASVVKTGSITAYSHFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGELTAYG--HFF 122
Query: 556 NFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
G +E R T F+P Y+ + D+ S+ +H+ G+ E R LG
Sbjct: 123 ANGADELRQATPFFSPLDYMAANPDV-------TSSPLRHFAEFGIAENRDLG 168
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 78/207 (37%), Gaps = 16/207 (7%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLYLGS 407
+ S + Y Y D+ + + Q +HF +G++EGR+ FD+ YL
Sbjct: 1 MASNVGSFFNEEFYLRVYSDVAEAVKQGAISSGYEHFLRYGMAEGRNPNRFFDTAYYLNQ 60
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
D+ +V + A H++ +G E R+P A F Y+ ++ D+
Sbjct: 61 NPDVASVVKTGSITAYSHFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGEL---TA 117
Query: 467 KDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
HF G +E R T F Y+ + D+ + + RH+ G+ E R+
Sbjct: 118 YGHFFANGADELRQATPFFSPLDYMAANPDVTS-------SPLRHFAEFGIAENRDLGNG 170
Query: 525 KALEYIASHEDLINAFADAPDLVQAGK 551
+ Y A +A +
Sbjct: 171 LKMTYFAQDTIFTDALFTGNFAAAFAR 197
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 18/172 (10%)
Query: 399 FDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
F+ YL Y D+ + H++ +G+ EGRNP+ F Y+ + D+ +
Sbjct: 9 FNEEFYLRVYSDVAEAVKQGAISSGYEHFLRYGMAEGRNPNRFFDTAYYLNQNPDVASVV 68
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
HF + G E R T FD YL + +D+ A H+ +G
Sbjct: 69 KTGSITAYS---HFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGELTAYGHFFANG 125
Query: 515 VKEGRNPDAFKA-LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
E R F + L+Y+A++ PD+ + HF+ FG E R +
Sbjct: 126 ADELRQATPFFSPLDYMAAN----------PDVTSSPLRHFAEFGIAENRDL 167
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 7/153 (4%)
Query: 483 FDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
F+ YL Y D+ + H++ +G+ EGRNP+ F Y + + +
Sbjct: 9 FNEEFYLRVYSDVAEAVKQGAISSGYEHFLRYGMAEGRNPNRFFDTAYYLNQNPDVASVV 68
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ HF + G E RS T F+ D YLT+ +D+ A H+ +G
Sbjct: 69 KTGSI--TAYSHFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGELTAYGHFFANGA 126
Query: 600 KEGRALG--ISGMQFKSVMNLSEKSRDKADLSL 630
E R S + + + S +
Sbjct: 127 DELRQATPFFSPLDYMAANPDVTSSPLRHFAEF 159
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 50/147 (34%), Gaps = 13/147 (8%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S E + Y D+ V+ + HF + G E R T
Sbjct: 32 SGYEHFLRYGMAEGRNPNRFFDTAYYLNQNPDVASVVKTGSITAYSHFVDNGNVELRSPT 91
Query: 399 --FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA-LEYIASHEDLINA 455
FD YL + +D+ A H+ +G E R F + L+Y+A++ D+
Sbjct: 92 AFFDVDWYLTNNNDVAVKVYRGELTAYGHFFANGADELRQATPFFSPLDYMAANPDV--- 148
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT 482
HF+ FG E R +
Sbjct: 149 -------TSSPLRHFAEFGIAENRDLG 168
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 52/164 (31%), Gaps = 24/164 (14%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGY-------EKN 259
+ S F Q D L L+ G IDL G +
Sbjct: 241 GVTAPATSSSFSQLTIGQASDGTLTLSGTGAKAGVTIDLANNQILDGGKTLLLRTDSVHS 300
Query: 260 MTIAQHTVIESVV--GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
A I SV G+S + + G++ + +G D G +G DTF + S
Sbjct: 301 TVDASGVKIASVTLTGTSRVETLTGSAQADTLSGGAGMDTLTGGAGADTFILASSSANDA 360
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ DF+S ++++ +D + ++
Sbjct: 361 --------------DTITDFVSGTDKIQLSDAVYSLTGSRGAAL 390
>gi|217978852|ref|YP_002362999.1| glycosyl transferase family 2 [Methylocella silvestris BL2]
gi|217504228|gb|ACK51637.1| glycosyl transferase family 2 [Methylocella silvestris BL2]
Length = 756
Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 73/244 (29%), Gaps = 37/244 (15%)
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEG-R-DITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
Y + H+ G+ EG R + FD Y R V
Sbjct: 29 YRKEYPAFEMGELGPIMHYLVEGVFEGARPHLLFDPDWY-------RTVASCKAANPLID 81
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--F 483
YI G G +P + + Y + HF +G T F
Sbjct: 82 YIKSGAAAGFDPSPYFSSAYYRK--------SAGALRGLTPLGHFIAYGLPCNATPTPLF 133
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 542
D YL D+ G D H++ G ++GR+P F A Y + + +A +
Sbjct: 134 DRDWYLAHNPDVMRA-GFD---PFLHFVASGARDGRSPGPLFDAPWYRMKNPGVRDAGVE 189
Query: 543 APDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
H+ + G EGR F+P Y+ A Y G
Sbjct: 190 P-------LRHYLSRGAAEGRRPHDGFDPVFYVAQ----APHASVTLEQALADYAEQGRA 238
Query: 601 EGRA 604
R+
Sbjct: 239 NWRS 242
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 63/206 (30%), Gaps = 25/206 (12%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
S Y +S + HF +GL T FD YL D
Sbjct: 85 SGAAAGFDPSPYFSSAYYRKSAGALRGLTPLGHFIAYGLPCNATPTPLFDRDWYLAHNPD 144
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ G D H++ G ++GR+P F A Y + + +A + H
Sbjct: 145 VMRA-GFD---PFLHFVASGARDGRSPGPLFDAPWYRMKNPGVRDAGVEP-------LRH 193
Query: 470 FSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
+ + G EGR FD Y+ A Y G R+ DA
Sbjct: 194 YLSRGAAEGRRPHDGFDPVFYVAQAPH----ASVTLEQALADYAEQGRANWRSADAA--- 246
Query: 528 EYIASHEDLINAFADAPDLVQAGKDH 553
+ + F D P A +H
Sbjct: 247 --LPPPGSPVAVFDDFPWRRSATSEH 270
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 48/172 (27%), Gaps = 30/172 (17%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRN 497
F Y + AF H+ G EG FD Y R
Sbjct: 24 FDEDWYRKEYP----AFEMGEL---GPIMHYLVEGVFEGARPHLLFDPDWY-------RT 69
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
V YI G G +P + + Y + HF +
Sbjct: 70 VASCKAANPLIDYIKSGAAAGFDPSPYFSSAYYRKSAGALRGL--------TPLGHFIAY 121
Query: 558 GYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
G + T F+ D YL D+ H++ G ++GR+ G
Sbjct: 122 GLPCNATPTPLFDRDWYLAHNPDVMRA----GFDPFLHFVASGARDGRSPGP 169
>gi|288560323|ref|YP_003423809.1| glycosyl transferase GT4 family [Methanobrevibacter ruminantium M1]
gi|288543033|gb|ADC46917.1| glycosyl transferase GT4 family [Methanobrevibacter ruminantium M1]
Length = 1012
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 59/322 (18%), Positives = 93/322 (28%), Gaps = 96/322 (29%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS---YLYLGSYDDL---- 411
+ Y Y D+ + KH+ G+ E R FD L DL
Sbjct: 31 FNYDNYLKKYPDVKE----SGMNPFKHYLLHGIDEERSTNFDENINSYSLVENSDLFDYE 86
Query: 412 -----RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLV-- 463
N+ A HY+ G K+G NP F A EY D+ A +
Sbjct: 87 YYCEKNNLKFDSYSKALMHYLEKGYKKGYNPSIKFNAEEYYEVRPDVKRADVNPLVHYLK 146
Query: 464 -------------------------------------------QVGKDHFSNFGCEEGRF 480
H+ G ++G
Sbjct: 147 YGKIEVTSMTENLNLKEYQLVKNSNLFDYNYYMEKNHLDLRNETEAIYHYLEIGYKKGYN 206
Query: 481 VT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN---------------PDA 523
+ F+ +Y D+ HY+ +G KE R
Sbjct: 207 PSNKFNGEIYFKKNPDIEESG----WNPLVHYLKYGQKEERTDKCDKNLKEYSLVKESGL 262
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWN 581
F Y ++ +N++ + G H+ FGY+ G S F+ + YL Y ++
Sbjct: 263 FDYQFYKDKYDLDLNSY-------KRGLIHYLEFGYKRGYKPSRNFDGEEYLKRYPEVKK 315
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
HY+ +G+ E R
Sbjct: 316 A----GFNPLVHYLKYGVNEER 333
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 95/302 (31%), Gaps = 55/302 (18%)
Query: 377 QDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ +++ + EG F+ YL Y D++ +HY+ HG+ E
Sbjct: 7 NKKITFVANYFWTSIKEGSKSNSYFNYDNYLKKYPDVKE----SGMNPFKHYLLHGIDEE 62
Query: 435 RNPDAFK---ALEYIASHEDLINAFADAP------DLVQVGKDHFSNFGCEEGRFVT--F 483
R+ + F + + DL + D H+ G ++G + F
Sbjct: 63 RSTN-FDENINSYSLVENSDLFDYEYYCEKNNLKFDSYSKALMHYLEKGYKKGYNPSIKF 121
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE---------------GRNPDAFKALE 528
++ Y D++ HY+ +G E +N + F
Sbjct: 122 NAEEYYEVRPDVKRA----DVNPLVHYLKYGKIEVTSMTENLNLKEYQLVKNSNLFDYNY 177
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSD 586
Y+ + + H+ GY++G + + FN ++Y D+
Sbjct: 178 YMEKNHLDLR-------NETEAIYHYLEIGYKKGYNPSNKFNGEIYFKKNPDIEE----S 226
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
HY+ +G KE R + ++ F K DL + +
Sbjct: 227 GWNPLVHYLKYGQKEERTDKCD-----KNLKEYSLVKESGLFDYQFYKDKYDLDLNSYKR 281
Query: 647 GN 648
G
Sbjct: 282 GL 283
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYL 405
D+ + ++ + S L Y+D + + H+ EFG G FD YL
Sbjct: 248 DKNLKEYSLVKESGLFDYQFYKDKYDLDLNSYKRGLIHYLEFGYKRGYKPSRNFDGEEYL 307
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
Y +++ G + HY+ +GV E R
Sbjct: 308 KRYPEVKKA-GFN---PLVHYLKYGVNEER 333
>gi|170744302|ref|YP_001772957.1| glycosyl transferase family protein [Methylobacterium sp. 4-46]
gi|168198576|gb|ACA20523.1| glycosyl transferase family 2 [Methylobacterium sp. 4-46]
Length = 987
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 66/295 (22%), Positives = 95/295 (32%), Gaps = 67/295 (22%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y Y D+ G HY++ G KEGR+P F L Y H
Sbjct: 17 FDERFYRLRYPDV----GVAGADPFAHYMSFGWKEGRDPSPSFPTLLYKDKH-------- 64
Query: 458 DAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDL----------RNVFGSDRGA- 505
P H++ E R V F + + + R+ D GA
Sbjct: 65 LGPTPRTNPLAHYAARPEAERQRAVAFSAEEAVAIQARVVRDHFDEAFYRDAARLDAGAD 124
Query: 506 AARHYITHGVKEGRNPDA-FKALEYIASHEDLIN-------------AFADAPDLVQAGK 551
A HY+T G +EG P F + + H + D P+ ++A
Sbjct: 125 ALTHYLTVGWREGYEPAPGFSSAAHAGKHRHIAATGLCPFYHFVSTYGLLDHPEPLEAA- 183
Query: 552 DHFSNFGYEEGR------------SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
G GR + F+ YLT Y D+ +HY+ G
Sbjct: 184 ---LACGASGGRARVSRPVVLSTIAQEFDRASYLTRYADVR----QSGIDPVEHYVDFGW 236
Query: 600 KEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDH-----KKVDLYTDYFGDGNY 649
KEGR F + E++ D F H + L + FG G +
Sbjct: 237 KEGRD---PSEWFWTGFYREEQAPHLGDAVNPFYHYLTEGRPAGLLPNPFGCGEW 288
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 59/284 (20%), Positives = 89/284 (31%), Gaps = 47/284 (16%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFG 416
Y Y D+ G + H+ FG EGRD +F + LY +
Sbjct: 17 FDERFYRLRYPDV----GVAGADPFAHYMSFGWKEGRDPSPSFPTLLYKDKHLGPTP--- 69
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN-----AFADAPDLVQVGKD--- 468
R HY E + AF A E +A ++ AF + G D
Sbjct: 70 --RTNPLAHYAARPEAERQRAVAFSAEEAVAIQARVVRDHFDEAFYRDAARLDAGADALT 127
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT---------------- 512
H+ G EG ++ + H+++
Sbjct: 128 HYLTVGWREG--YEPAPGFSSAAHAGKHRHIAATGLCPFYHFVSTYGLLDHPEPLEAALA 185
Query: 513 HGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQAGKD---HFSNFGYEEGRSITFN 568
G GR L IA D + D+ Q+G D H+ +FG++EGR +
Sbjct: 186 CGASGGRARVSRPVVLSTIAQEFDRASYLTRYADVRQSGIDPVEHYVDFGWKEGRDPS-- 243
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
+ Y + D HY+T EGR G+ F
Sbjct: 244 EWFWTGFYREEQAPHLGDAVNPFYHYLT----EGRPAGLLPNPF 283
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 64/215 (29%), Gaps = 40/215 (18%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ F+ + ++ + A Y D +++ H+ G EG +
Sbjct: 87 RAVAFSAEEAVAIQARVVRDHFDEAFYRD--AARLDAGADALTHYLTVGWREGYEP--AP 142
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHY----------------ITHGVKEGRNP-------- 437
++ + H+ + G GR
Sbjct: 143 GFSSAAHAGKHRHIAATGLCPFYHFVSTYGLLDHPEPLEAALACGASGGRARVSRPVVLS 202
Query: 438 ---DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
F Y+ + D+ + D +H+ +FG +EGR + + G Y +
Sbjct: 203 TIAQEFDRASYLTRYADVRQSGIDP-------VEHYVDFGWKEGR--DPSEWFWTGFYRE 253
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ D HY+T G G P+ F E+
Sbjct: 254 EQAPHLGDAVNPFYHYLTEGRPAGLLPNPFGCGEW 288
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 554 FSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR--ALGISGMQ 611
+ + + F+ Y Y D+ G + HY++ G KEGR + +
Sbjct: 4 WLRSPRKLSVRVHFDERFYRLRYPDV----GVAGADPFAHYMSFGWKEGRDPSPSFPTLL 59
Query: 612 FK 613
+K
Sbjct: 60 YK 61
>gi|213967248|ref|ZP_03395397.1| glycosyl transferase [Pseudomonas syringae pv. tomato T1]
gi|213928090|gb|EEB61636.1| glycosyl transferase [Pseudomonas syringae pv. tomato T1]
Length = 468
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 73/221 (33%), Gaps = 48/221 (21%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-------------PDAFKALEY 445
F + YL D+ + A+HY+ G EGR F Y
Sbjct: 8 FSASGYLNLNPDVASA----GIHPAQHYLQFGHAEGRRYKSTSVDKNNLLASGIFDPDFY 63
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDR 503
+ + D++ + +D DHF GC EGR+ + F S Y+ Y V +
Sbjct: 64 LQQYPDVLESGSDPA-------DHFLAGGCAEGRWASLFFRSDWYMDRYP----VSRTHP 112
Query: 504 GAAARHYITHGVKEGRNPDAFKA-LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE-E 561
HY+ G K G P+ F Y+ + + HF G E
Sbjct: 113 KNCLFHYLEIGSKLGYEPNPFFEPAYYLNKYRSELKGL--------EPLSHFIKHGVEGL 164
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
S F+ Y+ +HY+ GM+ G
Sbjct: 165 NPSPRFDSKSYIR--------ETGCSGNPLKHYLEKGMRAG 197
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 70/217 (32%), Gaps = 48/217 (22%)
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGR--------------DITFDSYLYLGSYDD 410
+ Y +L + +H+ +FG +EGR FD YL Y D
Sbjct: 10 ASGYLNLNPDVASAGIHPAQHYLQFGHAEGRRYKSTSVDKNNLLASGIFDPDFYLQQYPD 69
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLVQVGKDH 469
+ A H++ G EGR F + Y+ + + + H
Sbjct: 70 VLE----SGSDPADHFLAGGCAEGRWASLFFRSDWYMDRYP-------VSRTHPKNCLFH 118
Query: 470 FSNFGCEEGRFVT--FDSYLYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 525
+ G + G F+ YL Y +L+ + H+I HGV EG NP F
Sbjct: 119 YLEIGSKLGYEPNPFFEPAYYLNKYRSELKGLE------PLSHFIKHGV-EGLNPSPRFD 171
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
+ YI + H+ G G
Sbjct: 172 SKSYIRETG----CSGNP-------LKHYLEKGMRAG 197
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 67/200 (33%), Gaps = 42/200 (21%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--------------FVT 482
P+ F A Y+ + D+ +A H+ FG EGR
Sbjct: 5 PEDFSASGYLNLNPDVASAGIHPA-------QHYLQFGHAEGRRYKSTSVDKNNLLASGI 57
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD YL Y D+ GSD A H++ G EGR F ++ ++ +
Sbjct: 58 FDPDFYLQQYPDVLES-GSD---PADHFLAGGCAEGRWASLFFRSDWY------MDRYPV 107
Query: 543 APDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
+ + H+ G + G F P YL Y H+I HG+
Sbjct: 108 SRTHPKNCLFHYLEIGSKLGYEPNPFFEPAYYLNKYRSELK-----GLEPLSHFIKHGV- 161
Query: 601 EGRALGISGMQFKSVMNLSE 620
EG +F S + E
Sbjct: 162 EGLN---PSPRFDSKSYIRE 178
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+ YL D+ + AQHY+ G EGR + + +++ D
Sbjct: 8 FSASGYLNLNPDVASA----GIHPAQHYLQFGHAEGRRYKSTSVDKNNLLASGIFDPD 61
>gi|251825708|gb|ACT20904.1| protease [Microbacterium sp. GZ]
Length = 130
Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 14/130 (10%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRYD----S 96
P+ Q A+ +L W+ V ++ F + D+ F + + P
Sbjct: 3 TPHHQAKAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKG 62
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYEN 155
+ + IN + G HEIGH LGL HPG YN G D Y
Sbjct: 63 QSWYLINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAE 120
Query: 156 DSFLTSVMSY 165
D+ SVMSY
Sbjct: 121 DTRAYSVMSY 130
>gi|254502794|ref|ZP_05114945.1| hypothetical protein SADFL11_2833 [Labrenzia alexandrii DFL-11]
gi|222438865|gb|EEE45544.1| hypothetical protein SADFL11_2833 [Labrenzia alexandrii DFL-11]
Length = 1376
Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats.
Identities = 80/344 (23%), Positives = 122/344 (35%), Gaps = 50/344 (14%)
Query: 227 GDDLLDLTLIGGV--KNYIDL-NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GD LD + +N L N+ S ++ IA T ++GND+V G+
Sbjct: 1060 GDSTLDGAGQIRILGENTFGLENSSGTSGSDADYADLVIAFDTG----RSATGNDLVAGS 1115
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
S ++V S+ N +G LDT Y + + + V D D L VE
Sbjct: 1116 SNDDVLLGSTDNYALNGGKKLDTVVYDRTKDEVGLSGTRSGVTVTDG--DGADTLVAVEL 1173
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ F D + VI D S + F+ +
Sbjct: 1174 VVFTGANGTGQ---------------DRVLVINPDSSTSTGTY-----------GFNEAV 1207
Query: 404 YLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 461
YL ++ D+ + + A HY HG E R D F A Y+A + D+ A A
Sbjct: 1208 YLTTHADVAAAVAAGAFSSGADHYALHGKSEDRTADLLFDAEFYLADNADVAAAVAAGVF 1267
Query: 462 LVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEG 518
H+ FG E R V FD+ YL D+ +A +H++ HG +EG
Sbjct: 1268 ASAS--KHYELFGSSENRSVNPLFDAEYYLAQNTDVAQAIADGMFVSAYQHFLNHGDQEG 1325
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
R + + + L D +HF G +G
Sbjct: 1326 RAASIYFDTAVYRNEQGL--------DSGTNALEHFLLIGLPQG 1361
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
F+ +YL ++ D+ + + A HY HG E R D F A Y+A + D+ A
Sbjct: 1202 GFNEAVYLTTHADVAAAVAAGAFSSGADHYALHGKSEDRTADLLFDAEFYLADNADVAAA 1261
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDR-SAAAQHYIT 596
A + H+ FG E RS+ F+ + YL D+ +A QH++
Sbjct: 1262 VAAGVFASAS--KHYELFGSSENRSVNPLFDAEYYLAQNTDVAQAIADGMFVSAYQHFLN 1319
Query: 597 HGMKEGRALGI 607
HG +EGRA I
Sbjct: 1320 HGDQEGRAASI 1330
>gi|85714736|ref|ZP_01045723.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85714762|ref|ZP_01045749.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85698621|gb|EAQ36491.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85698647|gb|EAQ36517.1| possible protease [Nitrobacter sp. Nb-311A]
Length = 160
Score = 104 bits (258), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 60/159 (37%), Gaps = 33/159 (20%)
Query: 184 MVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ------------KDSPFIQTIYDSGGDDL 230
M+ DI A+Q +YGA + G +Y + + TI+D GG D
Sbjct: 1 MMFDIAALQHLYGANFNTNSGATVYSWSATGEMFVNGVAQGRPTGNRILLTIWDGGGSDT 60
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGY-------------EKNMTIA------QHTVIESV 271
D + +DL SW++ N+ A ++IE+
Sbjct: 61 YDFSNYA-TNLSVDLRPGSWTTTSSAQLARLHYDGSQLATGNIANALLFDADPRSLIENA 119
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
VG +GND ++GN A N + GND G G D
Sbjct: 120 VGGAGNDQILGNLAANSLRGAGGNDCLYGLEGNDYLEGG 158
>gi|330959384|gb|EGH59644.1| glycosyl transferase group 1 [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 471
Score = 103 bits (257), Expect = 9e-20, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 85/223 (38%), Gaps = 48/223 (21%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-------------NPDAFKAL 443
F + YL DL + A+HY+ +G EGR N F
Sbjct: 6 FDFSTAEYLRLNPDLAST----GLHPAQHYLDYGHAEGRKYQDISVEKKQLLNLGIFDPD 61
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGS 501
Y++ + D+ +A D +HF + GC EGR+ + F S Y+ + + R+
Sbjct: 62 FYLSQYPDVSSAGLDPA-------EHFLSSGCAEGRWASLFFRSDWYMDCHPESRSHH-- 112
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIAS-HEDLINAFADAPDLVQAGKDHFSNFGYE 560
HY G + G P+ F EY ++ ++D I +Q HF G+E
Sbjct: 113 --KNCLFHYSETGSRLGYEPNPFFEPEYYSTKYKDQI--------GLQEPLAHFIKHGHE 162
Query: 561 E-GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
+ S F+ Y+ G +HY+ GM+ G
Sbjct: 163 DLNPSPRFDAAAYI-------KATGCSG-NPLKHYLETGMQAG 197
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 74/216 (34%), Gaps = 46/216 (21%)
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGR---DIT-----------FDSYLYLGSYDD 410
TA Y L + +H+ ++G +EGR DI+ FD YL Y D
Sbjct: 10 TAEYLRLNPDLASTGLHPAQHYLDYGHAEGRKYQDISVEKKQLLNLGIFDPDFYLSQYPD 69
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + G D A H+++ G EGR F + Y+ H + + + H
Sbjct: 70 VSSA-GLD---PAEHFLSSGCAEGRWASLFFRSDWYMDCHPESRSHHKN-------CLFH 118
Query: 470 FSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKA 526
+S G G F+ Y Y D H+I HG E NP F A
Sbjct: 119 YSETGSRLGYEPNPFFEPEYYSTKYKD-----QIGLQEPLAHFIKHG-HEDLNPSPRFDA 172
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
YI + + H+ G + G
Sbjct: 173 AAYIKATG----CSGNP-------LKHYLETGMQAG 197
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 62/180 (34%), Gaps = 38/180 (21%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--------------T 482
P F EY+ + DL + H+ ++G EGR
Sbjct: 5 PFDFSTAEYLRLNPDLASTGLHPA-------QHYLDYGHAEGRKYQDISVEKKQLLNLGI 57
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD YL Y D+ + G D A H+++ G EGR F ++ ++ +
Sbjct: 58 FDPDFYLSQYPDVSSA-GLD---PAEHFLSSGCAEGRWASLFFRSDWY------MDCHPE 107
Query: 543 APDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
+ + H+S G G F P+ Y T Y D H+I HG +
Sbjct: 108 SRSHHKNCLFHYSETGSRLGYEPNPFFEPEYYSTKYKD-----QIGLQEPLAHFIKHGHE 162
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 25/97 (25%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-------------- 566
P F EY+ + DL + H+ ++G+ EGR
Sbjct: 5 PFDFSTAEYLRLNPDLASTGLHPAQ-------HYLDYGHAEGRKYQDISVEKKQLLNLGI 57
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+PD YL+ Y D+ + A+H+++ G EGR
Sbjct: 58 FDPDFYLSQYPDVSSA----GLDPAEHFLSSGCAEGR 90
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
F+ YL DL S AQHY+ +G EGR ++ K ++NL
Sbjct: 5 PFDFSTAEYLRLNPDLA----STGLHPAQHYLDYGHAEGRKYQDISVEKKQLLNLGIFDP 60
Query: 624 D 624
D
Sbjct: 61 D 61
>gi|254422971|ref|ZP_05036689.1| Matrixin family [Synechococcus sp. PCC 7335]
gi|196190460|gb|EDX85424.1| Matrixin family [Synechococcus sp. PCC 7335]
Length = 439
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/334 (18%), Positives = 102/334 (30%), Gaps = 65/334 (19%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--------- 77
+ Y D L + ITE + + W++ L F E
Sbjct: 38 TLTYSYDNLLDGGIKGGITE--SEMRSAIEESFELWAQYAPLNFVEVDDTGRKSQSNPDA 95
Query: 78 -DIKFISSNNGYVCTP------RYDSRYFMEINFDKADVWRYGIGKGTILSH-NALHEIG 129
DI+ Y EI+FD ++ W A+HEIG
Sbjct: 96 ADIRIGYRTIDGSGGTLGEAALTYFGDLATEIDFDSSENWAIDQTDSAFDFLAVAVHEIG 155
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H LGL H + + + D S + +F Y DI
Sbjct: 156 HTLGLNHESNKDAVMHPFASDI------------------YSGLGTAFLYS-----DDIE 192
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
++ +YG KG + EV D+ + +G + + L ++
Sbjct: 193 GIRALYGKGKGLVK---PVFEVPNSDAALV----------------LGTNADDVLLGSKR 233
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + I ++V+G GND + G ++ F ++ ND DG G D+
Sbjct: 234 SQTFQGLNGDDQIRAGEGSDTVIGDKGNDQLFGEGGDDELFGNANNDFLDGGEGNDSLIG 293
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
Y + D L V+
Sbjct: 294 EQGKD----VLVGGTGNDYLSGRKGSDTLVGVDN 323
>gi|317154878|ref|YP_004122926.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
aespoeensis Aspo-2]
gi|316945129|gb|ADU64180.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
aespoeensis Aspo-2]
Length = 911
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 12/203 (5%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQ----TIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+YG ++ Y + D T+ D GG D ++ + + G + ++L S
Sbjct: 687 LYGDN--PSADDYYIYTDEYADMVAADVSRATLEDGGGTDTINASAVTG-NSIVNLTPGS 743
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S++ G +TIA T IE GND++ GN ANN F GND G +G D +
Sbjct: 744 VSTLAGTS--LTIAAGTTIEHAHTGDGNDILTGNDANNNLFGWRGNDAISGGAGNDLLYG 801
Query: 310 YAPSYLYKIYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
S + + + +H DF S + FA + +
Sbjct: 802 GTGSDTLTGGTGNDTFYYGLPGEGGDHIMDFSSFDDVFHFAFAAFGQSAAGTLAAEYFFN 861
Query: 367 SYEDLIQVIGQDVFESMKHFYEF 389
S + FE+ +Y+
Sbjct: 862 SASSINVSDACFYFEADTLWYDA 884
>gi|251825702|gb|ACT20901.1| protease [Pseudomonas aeruginosa]
Length = 129
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 14/125 (11%)
Query: 53 EVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRYD----SRYFME 101
A+ +L W+ V ++ F + D+ F + + P + +
Sbjct: 7 SQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYL 66
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLT 160
IN + G HEIGH LGL HPG YN G D Y D+
Sbjct: 67 INSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAY 124
Query: 161 SVMSY 165
SVMSY
Sbjct: 125 SVMSY 129
>gi|330972788|gb|EGH72854.1| glycosyl transferase group 1 [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 468
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 80/224 (35%), Gaps = 50/224 (22%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-------------PDAFKAL 443
F + YL D+ S A+HY+ +G EGR F
Sbjct: 6 FDFSAVEYLRLNPDV----ASSGMHPAQHYLDYGRAEGRKYQDISVDKQQLLRLGIFDPD 61
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGS 501
Y++ + D+ NA D +HF GC EGR+ + F S Y+ + + + S
Sbjct: 62 FYMSHYPDVANAGLDPA-------EHFLTSGCAEGRWASVFFRSDWYMDCHPESK----S 110
Query: 502 DRGAAARHYITHGVKEGRNPDAFKA-LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
HY G + G P+ F Y+A ++D I HF G E
Sbjct: 111 HPKNCLFHYSEIGSRIGYEPNPFFEPEYYLAKYKDQI--------GFDEPLAHFIKHG-E 161
Query: 561 EG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
EG S F+ Y+ + +HY+ GM+ G
Sbjct: 162 EGFNPSPRFDAAAYIKA--------TGCSENPLKHYLRTGMQAG 197
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 82/222 (36%), Gaps = 50/222 (22%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR---DIT-----------FDSYLY 404
S +EY D+ +H+ ++G +EGR DI+ FD Y
Sbjct: 8 FSAVEYLRLNPDVA----SSGMHPAQHYLDYGRAEGRKYQDISVDKQQLLRLGIFDPDFY 63
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLV 463
+ Y D+ N G D A H++T G EGR F + Y+ H + + +
Sbjct: 64 MSHYPDVANA-GLD---PAEHFLTSGCAEGRWASVFFRSDWYMDCHPESKSHPKN----- 114
Query: 464 QVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
H+S G G F+ YL Y D G D H+I HG +EG NP
Sbjct: 115 --CLFHYSEIGSRIGYEPNPFFEPEYYLAKYKD---QIGFDE--PLAHFIKHG-EEGFNP 166
Query: 522 DA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
F A YI + ++ P H+ G + G
Sbjct: 167 SPRFDAAAYIKA-----TGCSENP------LKHYLRTGMQAG 197
Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 71/199 (35%), Gaps = 42/199 (21%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--------------T 482
P F A+EY+ + D+ ++ H+ ++G EGR
Sbjct: 5 PFDFSAVEYLRLNPDVASSGMHPA-------QHYLDYGRAEGRKYQDISVDKQQLLRLGI 57
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD Y+ Y D+ N G D A H++T G EGR F ++ ++ +
Sbjct: 58 FDPDFYMSHYPDVANA-GLD---PAEHFLTSGCAEGRWASVFFRSDWY------MDCHPE 107
Query: 543 APDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
+ + H+S G G F P+ YL Y D H+I HG +
Sbjct: 108 SKSHPKNCLFHYSEIGSRIGYEPNPFFEPEYYLAKYKD-----QIGFDEPLAHFIKHG-E 161
Query: 601 EGRALGISGMQFKSVMNLS 619
EG +F + +
Sbjct: 162 EGFN---PSPRFDAAAYIK 177
Score = 44.0 bits (102), Expect = 0.077, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
F+ YL D+ S AQHY+ +G EGR + + ++ L
Sbjct: 5 PFDFSAVEYLRLNPDVA----SSGMHPAQHYLDYGRAEGRKYQDISVDKQQLLRLGIFDP 60
Query: 624 D 624
D
Sbjct: 61 D 61
>gi|148261173|ref|YP_001235300.1| glycosyl transferase family protein [Acidiphilium cryptum JF-5]
gi|146402854|gb|ABQ31381.1| glycosyl transferase, family 2 [Acidiphilium cryptum JF-5]
Length = 995
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/302 (18%), Positives = 94/302 (31%), Gaps = 62/302 (20%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y + D+ G+D ++++ G G + FD Y S D+ +
Sbjct: 20 ALFDPVWYALRHPDI--AAGRDEAALLEYYLAVGGRLGHSPSPLFDEGFYRASNPDIAAL 77
Query: 415 FG-SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ H+ +G + G +P F Y H D+ D DH+
Sbjct: 78 VAEGGYASGFDHFCQYGHR-GLSPHWLFDDTLYGDLHADMSLENLDRHRCFGR-YDHWLK 135
Query: 473 FGCEEGR-----------------------------------------------FVTFDS 485
G E R FD
Sbjct: 136 SGQREQRICHFLFDSAFYRREVEAAGEGAARLESMGPFVHYLYALWDDTPERATSPYFDP 195
Query: 486 YLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 543
Y ++ R+ R A HYIT G G +P F ++ +++D+ A
Sbjct: 196 AWYAAMHESARDDIAEGRARNALHHYITRGEAAGFDPVPEFSERYHLDTYDDIAAAVEAG 255
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPD--LYLTSYDDLWNVFGSDRS-AAAQHYITHGMK 600
+ ++G HF +G E R + D Y + + N + A H T G++
Sbjct: 256 --VFRSGYHHFVRYGTLELRRPRADIDLIYYRDTNPRVRNDLAAGAVRDAFAHLRTIGLR 313
Query: 601 EG 602
EG
Sbjct: 314 EG 315
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 469 HFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 525
H E R + FD Y + D+ G D A +Y+ G + G +P F
Sbjct: 6 HLLLRLPAEQRPAWALFDPVWYALRHPDI--AAGRDEAALLEYYLAVGGRLGHSPSPLFD 63
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDD--LWN 581
Y AS+ D+ A+ +G DHF +G+ G S F+ LY + D L N
Sbjct: 64 EGFYRASNPDIAALVAEG--GYASGFDHFCQYGHR-GLSPHWLFDDTLYGDLHADMSLEN 120
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
+ H++ G +E R F S E
Sbjct: 121 LDRHRCFGRYDHWLKSGQREQRICHF---LFDSAFYRRE 156
>gi|227357928|ref|ZP_03842273.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
gi|227161873|gb|EEI46898.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
Length = 392
Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 79/262 (30%), Gaps = 91/262 (34%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETS--IHSDIKFIS---------------SNNGYVCT 91
P+ QEV L S DLTF ++++KF N G+
Sbjct: 137 PHQQEVITEILQLASDFADLTFTRVPIQKNANLKFGYFNHFYKDSTTFFMTRGNGGFAQY 196
Query: 92 PRYDSR-------------------------YFMEINFDK-----------ADVWRYGIG 115
P Y+ ++ N D D++ Y
Sbjct: 197 PNYNGTPIKEIGPNEDYDIPGTIFINLATHEFYKWENGDNIDKYIENEANPGDLYNYHDN 256
Query: 116 K----------------------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
G+ +HE+GHALGLMH Y +
Sbjct: 257 NQVAIIKSTDVLLNETMKSKHKLGSYEYLCFIHELGHALGLMHINVY------LKNIKND 310
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKI--- 209
++ SVM+Y D + Y T M+ DI+ +Q +YG + NN Y
Sbjct: 311 AILTYKYSVMAYQFADIKDADFAGLYPMTFMLVDILLLQYLYGPNMTTRLENNTYGFHSN 370
Query: 210 ------EVQQKDSPFIQTIYDS 225
+ + + I+D+
Sbjct: 371 TGRAAYSLNSIEDKLVSCIWDA 392
>gi|170742132|ref|YP_001770787.1| hypothetical protein M446_3988 [Methylobacterium sp. 4-46]
gi|168196406|gb|ACA18353.1| hypothetical protein M446_3988 [Methylobacterium sp. 4-46]
Length = 521
Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 29/172 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y Y R HY+ G EG P+ F + Y ++ + A A
Sbjct: 28 FDAAWYRKRYPAARR-------GLVSHYLASGAAEGHWPNPLFDPVWYATAYPE---AVA 77
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
D + + G R FD+ YL Y D+R+ R HY+ HGV
Sbjct: 78 DGTLPILS----YLRDGLATDRRPNPVFDTRWYLERYPDVRDY----RFHPLVHYLRHGV 129
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
++GR+P F L Y+ + D+ NA + P + H+ +FG EGR+
Sbjct: 130 EDGRDPSPDFSTLWYLEQNPDVRNA-GEHPLV------HYLHFGMHEGRAPR 174
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 68/190 (35%), Gaps = 30/190 (15%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
F A Y + P + H+ G EG + FD Y +Y
Sbjct: 24 ESGLFDAAWYRKRY----------PAARRGLVSHYLASGAAEGHWPNPLFDPVWYATAYP 73
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
+ +D Y+ G+ R P+ F Y+ + D+ + + P +
Sbjct: 74 EAV----ADGTLPILSYLRDGLATDRRPNPVFDTRWYLERYPDVRD-YRFHPLV------ 122
Query: 553 HFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
H+ G E+GR S F+ YL D+ N HY+ GM EGRA +
Sbjct: 123 HYLRHGVEDGRDPSPDFSTLWYLEQNPDVRNA----GEHPLVHYLHFGMHEGRAPRPASP 178
Query: 611 QFKSVMNLSE 620
++ ++ +E
Sbjct: 179 GDRAAVHRTE 188
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 18/148 (12%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DIT 398
V + + Y +Y + + D + + GL+ R +
Sbjct: 45 VSHYLASGAAEGHWPNPLFDPVWYATAYPEAVA----DGTLPILSYLRDGLATDRRPNPV 100
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ YL Y D+R+ R HY+ HGV++GR+P F L Y+ + D+ NA
Sbjct: 101 FDTRWYLERYPDVRDY----RFHPLVHYLRHGVEDGRDPSPDFSTLWYLEQNPDVRNAGE 156
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
H+ +FG EGR S
Sbjct: 157 HP-------LVHYLHFGMHEGRAPRPAS 177
>gi|186659959|gb|ACC85900.1| hypothetical protein 1 [Beta vulgaris subsp. vulgaris]
Length = 123
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNNG--------YVCTPRYDSRYFMEINFDKADV 109
++ W V ++TF E + D N + P + Y + +
Sbjct: 1 SMQSWXDVANVTFTEKASGGDGHMTFGNYSIXXDGAAXFAYLPGTGAGYDGTSWYLTNNS 60
Query: 110 WRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYF 166
+ HEIGH LGL HPG YN G D Y D+ S+MSY+
Sbjct: 61 YTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYW 120
Query: 167 MPQ 169
Sbjct: 121 SES 123
>gi|148238442|ref|YP_001223829.1| Zn-dependent metalloprotease [Synechococcus sp. WH 7803]
gi|147846981|emb|CAK22532.1| Possible Zn-dependent metalloprotease [Synechococcus sp. WH 7803]
Length = 435
Score = 101 bits (252), Expect = 4e-19, Method: Composition-based stats.
Identities = 65/410 (15%), Positives = 133/410 (32%), Gaps = 29/410 (7%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
+ N YT IA + D Y + + ++ Q+ R +
Sbjct: 35 IDNSNAAYTERAIATDGVLDYYLHTPGGAVTVAGGGFGEQTIESVGISAADQDYFRSVVE 94
Query: 61 EWSKVVDLTFEE--TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK-- 116
V+DL F E T+ D+ + ++ + +
Sbjct: 95 RLDAVIDLDFRESSTAAGGDVDL-FYDMEIDLGGSGNTLGLATTSGRGGWELFVNYPEVE 153
Query: 117 --GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
+ +HE+GHALGL HP G V G + + + +VM+Y PQ
Sbjct: 154 FDENYRRYVLIHELGHALGLEHPFEDGDGDTVNGTTDPWASAFPEDTVMAYRNPQ----- 208
Query: 175 ASFGYCATPMVSDIVAVQKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYD-SGGDDLL 231
S + +D+ A+ +++G + + +++ D G D +
Sbjct: 209 -SDNWPEFFTENDLNALIELWGEEVAFVPPSLVVEQPDLKDVSLRLFGAESDLIAGTDAV 267
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + I + G + + + + + + G G+D V G ++V
Sbjct: 268 DWINGSRGSDRISGAAGDD-FLRGGKDDDVLNGNRGDDWIFGDLGDDTVRGGKGDDVVNG 326
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDFL-----SDV 341
+ GND G G D + + D + +D
Sbjct: 327 NVGNDRIYGDLGNDQLRGGQGDDWIDGGDGNDQIWGDRGADLIRLSAGSDLVWDFSYADG 386
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+RL+ A++ ++ ++ +T ++G + + ++E L
Sbjct: 387 DRLQLANERTYTLGSAGGNLQIFTDIGTT--TLVGVGLADFKADWFESAL 434
>gi|124021808|ref|YP_001016115.1| hypothetical protein P9303_00951 [Prochlorococcus marinus str. MIT
9303]
gi|123962094|gb|ABM76850.1| Hypothetical protein P9303_00951 [Prochlorococcus marinus str. MIT
9303]
Length = 373
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 78/220 (35%), Gaps = 32/220 (14%)
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L ++ +HE+GHALGL HP G V G+ + + + +VM+Y P
Sbjct: 133 NHLRYSLIHELGHALGLEHPFDNTDGDVVDGITDPWTSAYPEDTVMAYRSPS------KG 186
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ V+D+ A+ I+GA N Q + + I +GGDD L
Sbjct: 187 SWPNAYTVNDLEALVSIWGAETQVFSNQ----SEQIFGEDYSEVIIAAGGDDAL------ 236
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G N + + V G G+DVV G + + GND+
Sbjct: 237 ----------------FGAGGNDDLLGGIGFDLVRGGPGDDVVRGGKNADQLYGGRGNDL 280
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G G D LY + N+ DF
Sbjct: 281 LRGGRGHDQLKGGVGDDLYWGGPGADLFRFSSGNDSVFDF 320
>gi|237799700|ref|ZP_04588161.1| glycosyl transferase group 1 [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331022555|gb|EGI02612.1| glycosyl transferase group 1 [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 473
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 77/223 (34%), Gaps = 48/223 (21%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-------------RNPDAFKAL 443
F + YL D+ + A+HY+ G EG R+ F +
Sbjct: 6 FDFSAVEYLRLNPDVASA----DMHPAQHYLDFGRAEGRRYQDISIDKQQLRSLGIFDSE 61
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGS 501
Y++ + D+ +A D +HF GC EGR+ + F S Y+ + D +
Sbjct: 62 FYMSENPDVASAGLDPA-------EHFLTGGCAEGRWASLFFRSNWYMDCHPDSKL---- 110
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
HY G + G P+ F EY ++ + HF G +E
Sbjct: 111 HPKNCLFHYSEIGSRLGYEPNPFFEPEYYSAKYKQHIGLEEP-------LAHFIKHG-KE 162
Query: 562 G--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G S F+ Y+ +HY+ GM+ G
Sbjct: 163 GFNPSPRFDSAAYI--------KTTGCSENPLKHYLQTGMQAG 197
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/222 (24%), Positives = 80/222 (36%), Gaps = 50/222 (22%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR---DIT-----------FDSYLY 404
S +EY D+ +H+ +FG +EGR DI+ FDS Y
Sbjct: 8 FSAVEYLRLNPDVASA----DMHPAQHYLDFGRAEGRRYQDISIDKQQLRSLGIFDSEFY 63
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLV 463
+ D+ + G D A H++T G EGR F + Y+ H D +
Sbjct: 64 MSENPDVASA-GLD---PAEHFLTGGCAEGRWASLFFRSNWYMDCHPD-------SKLHP 112
Query: 464 QVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ H+S G G F+ Y Y + G H+I HG KEG NP
Sbjct: 113 KNCLFHYSEIGSRLGYEPNPFFEPEYYSAKY---KQHIG--LEEPLAHFIKHG-KEGFNP 166
Query: 522 DA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
F + YI + ++ P H+ G + G
Sbjct: 167 SPRFDSAAYIKT-----TGCSENP------LKHYLQTGMQAG 197
Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 69/201 (34%), Gaps = 42/201 (20%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------------- 481
R P F A+EY+ + D+ +A H+ +FG EGR
Sbjct: 3 RLPFDFSAVEYLRLNPDVASADMHPA-------QHYLDFGRAEGRRYQDISIDKQQLRSL 55
Query: 482 -TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
FDS Y+ D+ + G D A H++T G EGR F + ++
Sbjct: 56 GIFDSEFYMSENPDVASA-GLD---PAEHFLTGGCAEGRWASLFFRSNWY------MDCH 105
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
D+ + H+S G G F P+ Y Y H+I HG
Sbjct: 106 PDSKLHPKNCLFHYSEIGSRLGYEPNPFFEPEYYSAKY-----KQHIGLEEPLAHFIKHG 160
Query: 599 MKEGRALGISGMQFKSVMNLS 619
KEG +F S +
Sbjct: 161 -KEGFN---PSPRFDSAAYIK 177
>gi|326404578|ref|YP_004284660.1| putative glycosyltransferase [Acidiphilium multivorum AIU301]
gi|325051440|dbj|BAJ81778.1| putative glycosyltransferase [Acidiphilium multivorum AIU301]
Length = 995
Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/302 (18%), Positives = 94/302 (31%), Gaps = 62/302 (20%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y + D+ G+D ++++ G G + FD Y S D+ +
Sbjct: 20 ALFDPVWYALRHPDI--AAGRDEAALLEYYLAVGGRLGHSPSPLFDEGFYRASNPDIAAL 77
Query: 415 FG-SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ H+ +G + G +P F Y H D+ D DH+
Sbjct: 78 VAEGGYASGFDHFCQYGHR-GLSPHWLFDDTLYGDLHADMSLENLDRHRCFGR-YDHWLK 135
Query: 473 FGCEEGR-----------------------------------------------FVTFDS 485
G E R FD
Sbjct: 136 SGQREQRICHFLFDSAFYRREVEAAGEGAARLESMGPFVHYLYALWDDTPERATSPYFDP 195
Query: 486 YLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 543
Y ++ R+ R A HY+T G G +P F ++ +++D+ A
Sbjct: 196 AWYAAMHESARDDIAEGRARNALHHYVTRGEAAGFDPVPEFSERYHLDTYDDIAAAVEAG 255
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPD--LYLTSYDDLWNVFGSDRS-AAAQHYITHGMK 600
+ ++G HF +G E R + D Y + + N + A H T G++
Sbjct: 256 --VFRSGYHHFVRYGTLELRRPRADIDLIYYRDTNPRVRNDLAAGAVRDAFAHLRTIGLR 313
Query: 601 EG 602
EG
Sbjct: 314 EG 315
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)
Query: 469 HFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 525
H E R + FD Y + D+ G D A +Y+ G + G +P F
Sbjct: 6 HLLLRLPAEQRPAWALFDPVWYALRHPDI--AAGRDEAALLEYYLAVGGRLGHSPSPLFD 63
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDD--LWN 581
Y AS+ D+ A+ +G DHF +G+ G S F+ LY + D L N
Sbjct: 64 EGFYRASNPDIAALVAEG--GYASGFDHFCQYGHR-GLSPHWLFDDTLYGDLHADMSLEN 120
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
+ H++ G +E R F S E
Sbjct: 121 LDRHRCFGRYDHWLKSGQREQRICHF---LFDSAFYRRE 156
>gi|323137036|ref|ZP_08072116.1| hypothetical protein Met49242DRAFT_1503 [Methylocystis sp. ATCC
49242]
gi|322397797|gb|EFY00319.1| hypothetical protein Met49242DRAFT_1503 [Methylocystis sp. ATCC
49242]
Length = 1174
Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats.
Identities = 59/309 (19%), Positives = 86/309 (27%), Gaps = 86/309 (27%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
S+ + Y A D+ + ++H+ E G EGRD F + YL S+ +
Sbjct: 400 SLADRLVDPAFYLAKNLDVAGA----GVDPVEHYRENGWREGRDPNGWFSTQWYL-SHSN 454
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKA----------LEYIASHEDLINAFADAP 460
+ H++ G G P A Y A E L F D
Sbjct: 455 IPED-----ARPLEHFVRVGAAAGLAPHP-DADIARDAAQRVGAYKARAEALRRRFGD-A 507
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
D Q D D YLG Y D+ HY G +E R+
Sbjct: 508 DSGQSLVDRLI------------DPEFYLGKYPDVAAAGAD----PVEHYRGSGWREERD 551
Query: 521 PDAFKALEYIASHEDL---------------INAFADAPDL---------------VQAG 550
P+ + + + A PD+
Sbjct: 552 PNRLFCTGWYRALPGVPQDVCPLEHFVQVGAAMGLAPHPDVNLVHFSLAHLNERWPRAEA 611
Query: 551 KDHFSNFGYEEGRSITFNPDL------------YLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ G +P YL ++ D+ G D A HY+ G
Sbjct: 612 LLYLLEQSRASGAVADIDPASPAVLARLVDRSWYLETHADVAAA-GCDPVA---HYLEAG 667
Query: 599 MKEGRALGI 607
EGRA
Sbjct: 668 QFEGRAPNP 676
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/292 (17%), Positives = 87/292 (29%), Gaps = 72/292 (24%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D+ ++ H+ G EGRD F + Y + +
Sbjct: 774 YRTAYPDIAAA----DVDAFDHYMVTGWREGRDPNPWFAAAWYRKAN----GIEPLCEAP 825
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASH----------EDLINAFADAPDLVQVGKDH- 469
H++ G G +P Y H L+ ++D + DH
Sbjct: 826 ELSHFVRVGAARGLSPHPDLDLARYAQIHFGEPASARALAHLVKNWSDPAFWIFPELDHP 885
Query: 470 --------------------------------FSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
G D+ Y Y D+
Sbjct: 886 FVAAFLADLGPVARRAQIIRLMRLTHPLAAPAEVAVGEASPFVAFVDTDWYHAHYPDVEA 945
Query: 498 VFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ A Y+ G + GR+P AF + Y+ ++ ++ A + +
Sbjct: 946 SGAT----PAADYLESGWRIGRDPSPAFSTIWYLDNYPEVAAAGVCP-------LEDYVI 994
Query: 557 FGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
G +GR F+ + Y Y N+ + AA Y+T G + GRA
Sbjct: 995 GGARDGRRPDEIFDREWYARRY----NLKSAAPDAALLDYVTTGWRRGRAPS 1042
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 91/310 (29%), Gaps = 76/310 (24%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-- 399
E + +++ ++ ++ + + + ++ G D
Sbjct: 575 EHFVQVGAAMGLAPHPDVNLVHFSLAHLNERWPRAEALLYLLEQSRASGAVADIDPASPA 634
Query: 400 ------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
D YL ++ D+ HY+ G EGR P+ + ++ L
Sbjct: 635 VLARLVDRSWYLETHADVAAA----GCDPVAHYLEAGQFEGRAPNPWFLPDFYCEKAGLS 690
Query: 454 -------------NAFADAPDLVQ-----------------VGKDHFSNFGCEEGRFVTF 483
A P H + E ++
Sbjct: 691 GDTPALAHFVRSGAAAGVPPHPAVDLCFYAARYLGQDSPSIAAYQHLLDSWRTEDAQLSP 750
Query: 484 D-------------------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
D + Y +Y D+ A HY+ G +EGR+P+ +
Sbjct: 751 DCNPRPLTLTEERSLRRLVAADWYRTAYPDIAAADVD----AFDHYMVTGWREGRDPNPW 806
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFG 584
A + + I +AP+L HF G R ++ +PDL L Y + FG
Sbjct: 807 FAAAWYR-KANGIEPLCEAPELS-----HFVRVGAA--RGLSPHPDLDLARYAQIH--FG 856
Query: 585 SDRSA-AAQH 593
SA A H
Sbjct: 857 EPASARALAH 866
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 82/280 (29%), Gaps = 66/280 (23%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ Y +Y D+ A HY+ G +EGR+P+ + A + A
Sbjct: 770 AADWYRTAYPDIAAA----DVDAFDHYMVTGWREGRDPNPWFAAAWYR------KANGIE 819
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV---- 515
P HF G R ++ L L Y + FG A A ++
Sbjct: 820 PLCEAPELSHFVRVGAA--RGLSPHPDLDLARYAQIH--FGEPASARALAHLVKNWSDPA 875
Query: 516 -----------------------KEGRNPDAFKALEYIASHEDLINAFADA--------- 543
+ + + +A+ ++ A
Sbjct: 876 FWIFPELDHPFVAAFLADLGPVARRAQIIRLMRLTHPLAAPAEVAVGEASPFVAFVDTDW 935
Query: 544 -----PDLVQAGKDH---FSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
PD+ +G + G+ GR S F+ YL +Y ++ +
Sbjct: 936 YHAHYPDVEASGATPAADYLESGWRIGRDPSPAFSTIWYLDNYPEVAAA----GVCPLED 991
Query: 594 YITHGMKEGRALG--ISGMQFKSVMNLSEKSRDKADLSLS 631
Y+ G ++GR + NL + D A L
Sbjct: 992 YVIGGARDGRRPDEIFDREWYARRYNLKSAAPDAALLDYV 1031
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 18/129 (13%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D+ Y Y D+ + A Y+ G + GR+P F + Y+ ++ ++ A
Sbjct: 932 DTDWYHAHYPDVE----ASGATPAADYLESGWRIGRDPSPAFSTIWYLDNYPEVAAAGVC 987
Query: 459 APDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ + G +GR FD Y Y N+ + AA Y+T G +
Sbjct: 988 P-------LEDYVIGGARDGRRPDEIFDREWYARRY----NLKSAAPDAALLDYVTTGWR 1036
Query: 517 EGRNPDAFK 525
GR P A
Sbjct: 1037 RGRAPSALF 1045
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 38/123 (30%), Gaps = 18/123 (14%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y A Y D+ + E G GRD + F + YL +Y ++
Sbjct: 936 YHAHYPDV----EASGATPAADYLESGWRIGRDPSPAFSTIWYLDNYPEVAAA----GVC 987
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Y+ G ++GR PD F Y + A + G GR
Sbjct: 988 PLEDYVIGGARDGRRPDEIFDREWYARRYNLKSAA-------PDAALLDYVTTGWRRGRA 1040
Query: 481 VTF 483
+
Sbjct: 1041 PSA 1043
Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 16/103 (15%)
Query: 510 YITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-- 566
+ +G E D Y+A + D+ A D +H+ G+ EGR
Sbjct: 391 FDCYGELERSLADRLVDPAFYLAKNLDVAGAGVDP-------VEHYRENGWREGRDPNGW 443
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
F+ YL+ + + + +H++ G G A
Sbjct: 444 FSTQWYLS------HSNIPEDARPLEHFVRVGAAAGLAPHPDA 480
>gi|114328203|ref|YP_745360.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114316377|gb|ABI62437.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 990
Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 83/256 (32%), Gaps = 18/256 (7%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
S L + A + + + H+ + G G FD Y+ + D+RN
Sbjct: 28 PSWLFFDADWYTVK----YGKPDGWHHYRDEGHQSGFCPNALFDEQWYVNANPDVRNAID 83
Query: 417 SDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA-DAPDLVQVGKDHFSNF 473
HY G K R+P+ F Y ++ DL G DH+
Sbjct: 84 EGVFTCGYDHYFRVGHK-IRSPNWLFDEAWYQRTYPDLFRFDGPVGRGDFVNGFDHYLRE 142
Query: 474 GCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV-KEGRNPDAFKALEYI 530
G EGR D L+ DR + G R+ F A Y+
Sbjct: 143 GAAEGRQPGLFLDPDLWNMFRPAHVPPKKEDRSLIEDVFDLAGQGHYPRSSWYFDAEWYL 202
Query: 531 ASHEDLINAFADAPDLVQAGKDHFS--NFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR- 587
++ + A + H+ + + + F+ + Y + DL R
Sbjct: 203 QNYPAVAEEIAAG--RWVSPLAHYLGNDTPHAFNPNPFFSEEEYRSGNADLDGFLQGGRF 260
Query: 588 SAAAQHYITHGMKEGR 603
H++ G++EGR
Sbjct: 261 RNGYMHFLEFGIQEGR 276
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 55/227 (24%), Gaps = 56/227 (24%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLY 404
Y + D+ I + VF H++ G R FD Y
Sbjct: 55 GHQSGFCPNALFDEQWYVNANPDVRNAIDEGVFTCGYDHYFRVGHKI-RSPNWLFDEAWY 113
Query: 405 LGSYDDLRNVFG----SDRGAAARHYITHGVKEGRNPDAF-------------------- 440
+Y DL G D HY+ G EGR P F
Sbjct: 114 QRTYPDLFRFDGPVGRGDFVNGFDHYLREGAAEGRQPGLFLDPDLWNMFRPAHVPPKKED 173
Query: 441 -----------------------KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC-- 475
A Y+ ++ + A H+
Sbjct: 174 RSLIEDVFDLAGQGHYPRSSWYFDAEWYLQNYPAVAEEIA--AGRWVSPLAHYLGNDTPH 231
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNP 521
F Y DL R H++ G++EGR P
Sbjct: 232 AFNPNPFFSEEEYRSGNADLDGFLQGGRFRNGYMHFLEFGIQEGRPP 278
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 17/160 (10%)
Query: 508 RHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
HY G + G P+A F Y+ ++ D+ NA + + G DH+ G++ RS
Sbjct: 49 HHYRDEGHQSGFCPNALFDEQWYVNANPDVRNAIDEG--VFTCGYDHYFRVGHK-IRSPN 105
Query: 567 --FNPDLYLTSYDDLWNVFG----SDRSAAAQHYITHGMKEGRALG--ISGMQFKSVM-- 616
F+ Y +Y DL+ G D HY+ G EGR G + +
Sbjct: 106 WLFDEAWYQRTYPDLFRFDGPVGRGDFVNGFDHYLREGAAEGRQPGLFLDPDLWNMFRPA 165
Query: 617 NLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYS 656
++ K D++ + FD Y Y+D++ Y
Sbjct: 166 HVPPKKEDRSLIEDVFDLAGQGHYPRS---SWYFDAEWYL 202
>gi|289609587|emb|CBI60417.1| unnamed protein product [Sordaria macrospora]
Length = 111
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/111 (46%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 394 GRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
GRD FD Y +Y DLR FG+D AA RHYI G EGR F AL Y A++ DL
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQ-FDALGYTAAYNDL 61
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
AF V G H+ FG EGR VTFD+ YL S +L FG+DR
Sbjct: 62 RAAFGAD---VDAGAAHYIRFGAAEGRSVTFDAIGYLASNPELITDFGTDR 109
Score = 93.6 bits (231), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L YTA+Y DL Q G D + +H+ +G +EGR FD+ Y +Y+DLR FG+
Sbjct: 8 AFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQFDALGYTAAYNDLRAAFGA 67
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
D A A HYI G EGR+ F A+ Y+AS+ +LI F +
Sbjct: 68 DVDAGAAHYIRFGAAEGRSV-TFDAIGYLASNPELITDFGTDRTV 111
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/108 (45%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ FD Y +Y DLR FG+D AA RHYI G EGR F AL Y A++ DL AF
Sbjct: 7 LAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQ-FDALGYTAAYNDLRAAF 65
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
D AG H+ FG EGRS+TF+ YL S +L FG+DR+
Sbjct: 66 GADVD---AGAAHYIRFGAAEGRSVTFDAIGYLASNPELITDFGTDRT 110
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR+P AF L Y A++ DL AF H+ +G EGR FD+ Y +Y+
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTDS---AAATRHYILWGKNEGRTAQFDALGYTAAYN 59
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
DLR FG+D A A HYI G EGR+ F A+ Y+AS+ +LI F
Sbjct: 60 DLRAAFGADVDAGAAHYIRFGAAEGRSV-TFDAIGYLASNPELITDFG 106
Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
GR+P AF L Y A++ DL AF A H+ +G EGR+ F+ Y +Y+
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTD---SAAATRHYILWGKNEGRTAQFDALGYTAAYN 59
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
DL FG+D A A HYI G EGR++ + +
Sbjct: 60 DLRAAFGADVDAGAAHYIRFGAAEGRSVTFDAIGY 94
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 36/69 (52%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ Q L YTA+Y DL G DV H+ FG +EGR +TFD+ YL S +L
Sbjct: 42 NEGRTAQFDALGYTAAYNDLRAAFGADVDAGAAHYIRFGAAEGRSVTFDAIGYLASNPEL 101
Query: 412 RNVFGSDRG 420
FG+DR
Sbjct: 102 ITDFGTDRT 110
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMN 617
+ F+P Y +Y DL FG+D +AA +HYI G EGR + + + N
Sbjct: 6 PLAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQFDALGYTAAYN 59
>gi|296444476|ref|ZP_06886441.1| glycosyl transferase family 2 [Methylosinus trichosporium OB3b]
gi|296258123|gb|EFH05185.1| glycosyl transferase family 2 [Methylosinus trichosporium OB3b]
Length = 962
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 78/264 (29%), Gaps = 73/264 (27%)
Query: 379 VFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDD-------------------------- 410
+ + HF G EGR+ +F + Y
Sbjct: 36 GIDPLAHFLRHGWREGRNPSWSFHTLYYRDENPSCGRRENPLLHYLANKHAQPLRVFPET 95
Query: 411 ----------------------LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 447
L+ + G+ A HY+ G + G +P A F Y+
Sbjct: 96 EEELIELQKRVVAGHFDEDFYRLKYLGGALDCDALDHYLRSGWRLGFDPSADFSTNNYLD 155
Query: 448 SH--------EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
++ L + A Q + + FD+ YL + D+
Sbjct: 156 ANSHARAAKVSPLYHHVATRSMAAQAPRVAPARANIAAALAPEFDAGFYLRANPDVAAQ- 214
Query: 500 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ HYI G +EGR+P A F Y++S+ D+ A + H+ G
Sbjct: 215 ---KLDPLAHYIERGWREGRDPSAVFWTSYYLSSNPDVRAAGENP-------FHHYITRG 264
Query: 559 YEEGRSITFNPDLYLTSYDDLWNV 582
EGR NP L
Sbjct: 265 RGEGRKP--NPVGALAWPKPTAPA 286
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 73/256 (28%), Gaps = 85/256 (33%)
Query: 422 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDH---FSNFGCEE 477
H++ HG +EGRNP +F L Y + + P L + H F E
Sbjct: 39 PLAHFLRHGWREGRNPSWSFHTLYYRDENPSCGR--RENPLLHYLANKHAQPLRVFPETE 96
Query: 478 GRFVT---------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA----- 523
+ FD Y Y L D A HY+ G + G +P A
Sbjct: 97 EELIELQKRVVAGHFDEDFYRLKY--LGGALDCD---ALDHYLRSGWRLGFDPSADFSTN 151
Query: 524 -----------------------------------------------FKALEYIASHEDL 536
F A Y+ ++ D+
Sbjct: 152 NYLDANSHARAAKVSPLYHHVATRSMAAQAPRVAPARANIAAALAPEFDAGFYLRANPDV 211
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
D H+ G+ EGR + F YL+S D+ HY
Sbjct: 212 AAQKLDP-------LAHYIERGWREGRDPSAVFWTSYYLSSNPDVRAA----GENPFHHY 260
Query: 595 ITHGMKEGRALGISGM 610
IT G EGR G
Sbjct: 261 ITRGRGEGRKPNPVGA 276
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y + D+ + + H+ E G EGRD + F + YL S D+R
Sbjct: 197 PEFDAGFYLRANPDVAA----QKLDPLAHYIERGWREGRDPSAVFWTSYYLSSNPDVRAA 252
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA 439
HYIT G EGR P+
Sbjct: 253 ----GENPFHHYITRGRGEGRKPNP 273
>gi|163851641|ref|YP_001639684.1| glycosyl transferase family protein [Methylobacterium extorquens
PA1]
gi|163663246|gb|ABY30613.1| glycosyl transferase family 2 [Methylobacterium extorquens PA1]
Length = 1035
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 80/249 (32%), Gaps = 50/249 (20%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS------- 448
FD Y +Y D+ + G RHY+ HG EGR+P A F L Y
Sbjct: 33 PFFDPAFYRSAYPDV----AAGGGDPLRHYLDHGWLEGRDPSAVFSTLFYADRHFADRAP 88
Query: 449 -HEDLINAFADAPDLVQVGKDHFSNF-GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ L A + ++V S+F + G + Y L G D A
Sbjct: 89 INPLLHYAGLSPTERLRVATQPGSDFPALQAGVVEPYFDAPYYARLAGLEG--GEDPLA- 145
Query: 507 ARHYITHGVKEGRNPD-AFKALEYI------------------------ASHEDLINAFA 541
HY+T G + G +P+ AF Y+ AS A
Sbjct: 146 --HYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQASEAAAPPARR 203
Query: 542 DAPDLVQAGKDHFSNFGYE--EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P D + E + F+ + YL + D+ +H++ G
Sbjct: 204 AKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRR----SGIDPVRHFLDFGA 259
Query: 600 KEGRALGIS 608
+E R
Sbjct: 260 REDRDPSPD 268
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 83/294 (28%), Gaps = 93/294 (31%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYD 409
++ Y ++Y D+ G + ++H+ + G EGRD + F + Y +
Sbjct: 28 AAMAAPFFDPAFYRSAYPDVAAGGG----DPLRHYLDHGWLEGRDPSAVFSTLFYADRHF 83
Query: 410 DLRNVF---------------------GSDRGA--------------------------A 422
R GSD A
Sbjct: 84 ADRAPINPLLHYAGLSPTERLRVATQPGSDFPALQAGVVEPYFDAPYYARLAGLEGGEDP 143
Query: 423 ARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADA---------------------- 459
HY+T G + G +P+ AF Y+ H +
Sbjct: 144 LAHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQASEAAAPPARR 203
Query: 460 ----PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
L+ S+ E FD YL + D+R G D RH++ G
Sbjct: 204 AKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRRS-GID---PVRHFLDFGA 259
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG-RSITF 567
+E R+P F Y + I A + H+ G G R F
Sbjct: 260 REDRDPSPDFSVRFYRKHYRREIGAGVNP-------FFHYLAVGRARGFRPTPF 306
>gi|330992569|ref|ZP_08316517.1| hypothetical protein SXCC_02476 [Gluconacetobacter sp. SXCC-1]
gi|329760768|gb|EGG77264.1| hypothetical protein SXCC_02476 [Gluconacetobacter sp. SXCC-1]
Length = 1017
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 81/259 (31%), Gaps = 19/259 (7%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y + L+ +G + E+ + G + G FD Y +Y +
Sbjct: 47 AAFDPAWYCTRHAALLDTLGVEPGEAHAFYTTHGAALGHSPNAFFDETWYRQAYPGVARA 106
Query: 415 FGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ HY+ G++ F Y A+ DL A + G DH+
Sbjct: 107 IAQGIWPSGFAHYLQAGLRTHSPHWLFDEHAYRAACPDLTQAVMEDGGYRN-GYDHYLRA 165
Query: 474 GCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVK--EGRNPDA-FKAL 527
G E R FD L + G D A Y+ G+ R F A
Sbjct: 166 GDGEMRTGSCFFDPVTCLALVPE----NGRDAAAHPFVDYLLRGMAAMPDRAVSVYFDAG 221
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFS--NFGYEEGRSITFNPDLYLTSYDDLWNVFGS 585
Y+ ++ + A D + H+ F+ Y + D+ S
Sbjct: 222 WYVRTYPAV-QAAIDRGE-WLCALHHYLCNTTPLAFDPGPFFSESFYASVNPDVLEAVES 279
Query: 586 DRS-AAAQHYITHGMKEGR 603
R HY++ G+ E R
Sbjct: 280 GRLRNGYAHYLSDGVFEQR 298
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 47/138 (34%), Gaps = 8/138 (5%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
+ FD Y + L + G + G A Y THG G +P+A F Y ++ +
Sbjct: 46 WAAFDPAWYCTRHAALLDTLGVEPGEAHAFYTTHGAALGHSPNAFFDETWYRQAYPGVAR 105
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRS-ITFNPDLYLTSYDDLWNVFGSD--RSAAAQHYI 595
A A + +G H+ G F+ Y + DL D HY+
Sbjct: 106 AIAQG--IWPSGFAHYLQAGLRTHSPHWLFDEHAYRAACPDLTQAVMEDGGYRNGYDHYL 163
Query: 596 THGMKEGRALG--ISGMQ 611
G E R +
Sbjct: 164 RAGDGEMRTGSCFFDPVT 181
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 68/267 (25%), Gaps = 58/267 (21%)
Query: 342 ERLRFA---DQCIDSVNVKQRSILEYTASYEDLIQVIGQDV-FESMKHFYEFGLS-EGRD 396
E F + Y +Y + + I Q + H+ + GL
Sbjct: 71 EAHAFYTTHGAALGHSPNAFFDETWYRQAYPGVARAIAQGIWPSGFAHYLQAGLRTHSPH 130
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRG--AAARHYITHGVKE--------------------G 434
FD + Y + DL D G HY+ G E G
Sbjct: 131 WLFDEHAYRAACPDLTQAVMEDGGYRNGYDHYLRAGDGEMRTGSCFFDPVTCLALVPENG 190
Query: 435 RNPDA----------------------FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
R+ A F A Y+ ++ + A L H+
Sbjct: 191 RDAAAHPFVDYLLRGMAAMPDRAVSVYFDAGWYVRTYPAVQAAIDRGEWL--CALHHYLC 248
Query: 473 FG--CEEGRFVTFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNP-DAFKALE 528
F Y D+ S R HY++ GV E R P
Sbjct: 249 NTTPLAFDPGPFFSESFYASVNPDVLEAVESGRLRNGYAHYLSDGVFEQRKPCSMLDLAA 308
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFS 555
Y+ + A + G H+
Sbjct: 309 YMRDPAVQADLAAGR---ARDGLGHYL 332
>gi|254502410|ref|ZP_05114561.1| hypothetical protein SADFL11_2449 [Labrenzia alexandrii DFL-11]
gi|222438481|gb|EEE45160.1| hypothetical protein SADFL11_2449 [Labrenzia alexandrii DFL-11]
Length = 806
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 27/145 (18%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 453
I F+ YL + D+ + +A H+ G EGR+P+ F Y++ + D+
Sbjct: 2 SIAFNEEYYLANNPDVAAAIDAGLFQSAVEHFNLFGWSEGRDPNENFDTSFYLSENPDVA 61
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT------------------FDSYLYLGSYDDL 495
A + DHF +G EGR FDS YL + D+
Sbjct: 62 AAGVNP-------LDHFWVYGAAEGRIPNQTIDTLLGQPDIGGGDDAFDSATYLAANPDV 114
Query: 496 RNVFGSDRGAAARHYITHGVKEGRN 520
+ + A +H++ +G E R+
Sbjct: 115 QAAVEAGSFTAYQHWVLYGQFENRD 139
Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 27/144 (18%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
+ F+ YL + D+ + +A H+ G EGR+P+ F Y++ + D+
Sbjct: 2 SIAFNEEYYLANNPDVAAAIDAGLFQSAVEHFNLFGWSEGRDPNENFDTSFYLSENPDVA 61
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT------------------FNPDLYLTSYDDL 579
A + DHF +G EGR F+ YL + D+
Sbjct: 62 AAGVNP-------LDHFWVYGAAEGRIPNQTIDTLLGQPDIGGGDDAFDSATYLAANPDV 114
Query: 580 WNVFGSDRSAAAQHYITHGMKEGR 603
+ A QH++ +G E R
Sbjct: 115 QAAVEAGSFTAYQHWVLYGQFENR 138
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 27/142 (19%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y A+ D+ I +F+S +HF FG SEGRD FD+ YL D+
Sbjct: 4 AFNEEYYLANNPDVAAAIDAGLFQSAVEHFNLFGWSEGRDPNENFDTSFYLSENPDVAAA 63
Query: 415 FGSDRGAAARHYITHGVKEGRNPD-----------------AFKALEYIASHEDLINAFA 457
H+ +G EGR P+ AF + Y+A++ D+ A
Sbjct: 64 ----GVNPLDHFWVYGAAEGRIPNQTIDTLLGQPDIGGGDDAFDSATYLAANPDVQAAVE 119
Query: 458 DAPDLVQVGKDHFSNFGCEEGR 479
H+ +G E R
Sbjct: 120 AGSF---TAYQHWVLYGQFENR 138
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 28/144 (19%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLR 496
AF Y+A++ D+ A L Q +HF+ FG EGR FD+ YL D+
Sbjct: 4 AFNEEYYLANNPDVAAAI--DAGLFQSAVEHFNLFGWSEGRDPNENFDTSFYLSENPDVA 61
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPD-----------------AFKALEYIASHEDLINA 539
H+ +G EGR P+ AF + Y+A++ D+ A
Sbjct: 62 AAG----VNPLDHFWVYGAAEGRIPNQTIDTLLGQPDIGGGDDAFDSATYLAANPDVQAA 117
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
H+ +G E R
Sbjct: 118 VEAGSF---TAYQHWVLYGQFENR 138
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 22/118 (18%)
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
F S VE + Y + D+ + HF+ +G +EGR
Sbjct: 26 FQSAVEHFNLFGWSEGRDPNENFDTSFYLSENPDVAAA----GVNPLDHFWVYGAAEGRI 81
Query: 397 IT------------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
FDS YL + D++ + A +H++ +G E R+
Sbjct: 82 PNQTIDTLLGQPDIGGGDDAFDSATYLAANPDVQAAVEAGSFTAYQHWVLYGQFENRD 139
>gi|251825698|gb|ACT20899.1| protease [Pseudomonas aeruginosa]
Length = 126
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRYD----SRYFM 100
Q+ + +L WS V + F + D+ F + + P + +
Sbjct: 3 QQPDKLSLQSWSDVAKINFVDAGQGEQGDLVFGNFSSSVGGAAFAFLPDVQDALKGQSWY 62
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFL 159
IN + G HEIGH LGL HPG YN G D Y D+
Sbjct: 63 LINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRA 120
Query: 160 TSVMSY 165
SVMSY
Sbjct: 121 YSVMSY 126
>gi|288959389|ref|YP_003449730.1| hypothetical protein AZL_025480 [Azospirillum sp. B510]
gi|288911697|dbj|BAI73186.1| hypothetical protein AZL_025480 [Azospirillum sp. B510]
Length = 339
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 66/187 (35%), Gaps = 35/187 (18%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-------------------- 436
I F++ YL D+ + A H+ T G KEGR
Sbjct: 4 IDFNAKRYLDENPDVADAVQKGLITAWEHFRTAGQKEGRAAYDSSGMPVQADLIADQTGP 63
Query: 437 ------PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF------VTFD 484
P F Y+ ++ D+ +A + H+ + G +EGR +FD
Sbjct: 64 KPAAPAPKDFNEAAYLKANPDVADAVQKG---MITAYGHWESSGRKEGRTGAYAVDPSFD 120
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ YL + D+ A HYI G E R+ A A +D++ A A
Sbjct: 121 AAYYLKTNPDVAAAVKRGETTAEEHYILAGKAEKRSASAPAAPPPKPLRDDVLQAIAQQA 180
Query: 545 DLVQAGK 551
D V +G
Sbjct: 181 DHVDSGL 187
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 35/155 (22%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-------------------- 520
+ F++ YL D+ + A H+ T G KEGR
Sbjct: 4 IDFNAKRYLDENPDVADAVQKGLITAWEHFRTAGQKEGRAAYDSSGMPVQADLIADQTGP 63
Query: 521 ------PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS------ITFN 568
P F Y+ ++ D+ +A + H+ + G +EGR+ +F+
Sbjct: 64 KPAAPAPKDFNEAAYLKANPDVADAVQKG---MITAYGHWESSGRKEGRTGAYAVDPSFD 120
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
YL + D+ + A +HYI G E R
Sbjct: 121 AAYYLKTNPDVAAAVKRGETTAEEHYILAGKAEKR 155
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 46/132 (34%), Gaps = 9/132 (6%)
Query: 345 RFADQCIDSVNVKQRSILE---YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR------ 395
ADQ Y + D+ + + + + H+ G EGR
Sbjct: 56 LIADQTGPKPAAPAPKDFNEAAYLKANPDVADAVQKGMITAYGHWESSGRKEGRTGAYAV 115
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D +FD+ YL + D+ A HYI G E R+ A A +D++ A
Sbjct: 116 DPSFDAAYYLKTNPDVAAAVKRGETTAEEHYILAGKAEKRSASAPAAPPPKPLRDDVLQA 175
Query: 456 FADAPDLVQVGK 467
A D V G
Sbjct: 176 IAQQADHVDSGL 187
Score = 44.0 bits (102), Expect = 0.096, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
I FN YL D+ + A +H+ T G KEGRA
Sbjct: 3 QIDFNAKRYLDENPDVADAVQKGLITAWEHFRTAGQKEGRA 43
>gi|257094797|ref|YP_003168438.1| peptidase S8/S53 subtilisin kexin sedolisin [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047321|gb|ACV36509.1| peptidase S8 and S53 subtilisin kexin sedolisin [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 1388
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 83/420 (19%), Positives = 155/420 (36%), Gaps = 49/420 (11%)
Query: 203 GNNIY----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ Y K V P + + D GG D ++ I +DL SSI G
Sbjct: 485 GNDTYVYTDKFSVLAPADPARRVLSDLGGTDNVNTASIA-SDTLLDLRPGYSSSIDGQT- 542
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I+ TVIE+ GNDV+IGN A N GND+ DG G DT +Y +
Sbjct: 543 -VVISAGTVIENADTGDGNDVLIGNDAANSLRGWRGNDLLDGGPGADTLEGGVGDDVYVV 601
Query: 319 YRFENAIIVYDANEHKQDFLS----------DVERLRFAD-QCIDSVNVKQRSILEYTAS 367
+ ++ +A D + ++E+L F +++
Sbjct: 602 DSAGD--VLVEAATGGNDTVRTTLAAYVLGANLEKLAFVGTGSFSGTGNGTANVITGGFG 659
Query: 368 YEDLIQVIGQDV-----------FESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVF 415
+ L IG D +++ EG DI + S LG+ + ++
Sbjct: 660 NDSLNGGIGVDTLIGGVGDDSYYVDNLGDNVVELAGEGNDIVYSSVASTLGANLERISLT 719
Query: 416 GSDRGAAARHYIT-----HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G+ +A + + +G + Y+ S + ++ ++ D+V +
Sbjct: 720 GNAAISATGNELANTLYGNGAANVLSGALGDDTYYVGSGDTIVELASEGNDIVYSTVA-W 778
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ E +T ++ + + ++G+ GAA + G Y+
Sbjct: 779 TLGANLERISLTGNAAISATGNELANTLYGNGNGAA---NVLSG-------GLGDDTYYV 828
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
S + ++ + D+V + ++ E S+T N + T + ++G+ SAA
Sbjct: 829 GSGDTIVELASGGNDIVCSSVA-WTLGANLERLSLTGNAAINATGNELANTLYGNSNSAA 887
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 70/219 (31%), Gaps = 18/219 (8%)
Query: 197 APKGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-S 252
A L N +Y + Y +G D + G S S +
Sbjct: 870 ATGNELANTLYGNSNSAANVLIGGLGSDTYFAGEGDTISEMADEGSDKVYSYGDASLSAN 929
Query: 253 IGGYEKNMTIAQH-TVIES---VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N++ A T E V G+ GND++IG ++ G D G +G DT++
Sbjct: 930 VENLYLNVSAAATLTGNELPNRVSGNIGNDILIGLFGSDTLDGGLGADTLIGGAGNDTYY 989
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ E VY + ++VERL + + + A
Sbjct: 990 IDNLNDSIVELASEGDDSVYSSVGWTLG--ANVERLCLTGTAAIAGTGNE--LANTLAGN 1045
Query: 369 EDLIQVIGQDVFESMKHFYEFG------LSEGRDITFDS 401
+ + ++ G L EG DI + S
Sbjct: 1046 ANSTANVLAGGLGDDGYYVGSGDSVVELLGEGNDIVYSS 1084
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 194 IYGAPK-------GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+YG+ G LG++ Y + DS D +L+ ++N N
Sbjct: 1188 LYGSANSAANVLAGGLGDDAYYAGAGDTAIEMAKQGIDS-VYSYGDYSLLDNIENLYLSN 1246
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + G N ++ + + ++G +G D + G+ +++ G+D+ G G D
Sbjct: 1247 STAAALTGNELAN-RVSGNIANDILIGLAGRDTLDGSLGDDILEGGVGDDILFGGGGSDR 1305
Query: 307 FFYYAPSYLYKIYRFENA 324
F + +I F
Sbjct: 1306 FVFDTAFGTDRINDFTPG 1323
Score = 38.2 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 14/221 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + + ++L +E S+ V
Sbjct: 967 SDTLDGGLGADTLIGGAGNDTY--YIDNLNDSIVELASEGDDSVYSSVG--WTLGANVER 1022
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + GN N ++ + +V G G D ++ + + ++ N I+
Sbjct: 1023 LCLTGTAAIAGTGNELANTLAGNANSTANVLAGGLGDDGYYVGSGDSVVELLGEGNDIVY 1082
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE----SM 383
+ S++ERL + + Y + + G + +
Sbjct: 1083 SSMSW---TLGSNIERLYLTGSAAITGTANALANTLYGNANSAANVLAGGLGDDGYYVGI 1139
Query: 384 KHFYEFGLSEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAA 423
EG DI + D LG+ + + GS A
Sbjct: 1140 GDTVVEFSGEGNDIVYSDISWTLGANVERLYLTGSSAIAGT 1180
>gi|218530448|ref|YP_002421264.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
gi|218522751|gb|ACK83336.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
Length = 1059
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 79/249 (31%), Gaps = 50/249 (20%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS------- 448
FD Y +Y D+ + G RHY+ HG EGR+P A F L Y
Sbjct: 57 PFFDPAFYRSAYPDV----AAGGGDPLRHYLDHGWLEGRDPSAVFSTLFYADRHFADRAP 112
Query: 449 -HEDLINAFADAPDLVQVGKDHFSNF-GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ L A + ++V +F + G + Y L G D A
Sbjct: 113 INPLLHYAGLSPTERLRVATQPGPDFPALQAGVVEPYFDAPYYARLAGLEG--GEDPLA- 169
Query: 507 ARHYITHGVKEGRNPD-AFKALEYI------------------------ASHEDLINAFA 541
HY+T G + G +P+ AF Y+ AS A
Sbjct: 170 --HYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQASEAAAPPARR 227
Query: 542 DAPDLVQAGKDHFSNFGYE--EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P D + E + F+ + YL + D+ +H++ G
Sbjct: 228 AKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRR----SGIDPVRHFLDFGA 283
Query: 600 KEGRALGIS 608
+E R
Sbjct: 284 REDRDPSPD 292
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 82/294 (27%), Gaps = 93/294 (31%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYD 409
++ Y ++Y D+ G + ++H+ + G EGRD + F + Y +
Sbjct: 52 AAMAAPFFDPAFYRSAYPDVAAGGG----DPLRHYLDHGWLEGRDPSAVFSTLFYADRHF 107
Query: 410 DLRNVF---------------------GSDRGA--------------------------A 422
R G D A
Sbjct: 108 ADRAPINPLLHYAGLSPTERLRVATQPGPDFPALQAGVVEPYFDAPYYARLAGLEGGEDP 167
Query: 423 ARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADA---------------------- 459
HY+T G + G +P+ AF Y+ H +
Sbjct: 168 LAHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQASEAAAPPARR 227
Query: 460 ----PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
L+ S+ E FD YL + D+R G D RH++ G
Sbjct: 228 AKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRRS-GID---PVRHFLDFGA 283
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG-RSITF 567
+E R+P F Y + I A + H+ G G R F
Sbjct: 284 REDRDPSPDFSVRFYRKHYRREIGAGVNP-------FFHYLAVGRARGFRPTPF 330
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 13/95 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL + D+R G D RH++ G +E R+P F Y + I A
Sbjct: 255 FDREHYLDTNPDIRRS-GID---PVRHFLDFGAREDRDPSPDFSVRFYRKHYRREIGAGV 310
Query: 458 DAPDLVQVGKDHFSNFGCEEG-RFVTFDSYLYLGS 491
+ H+ G G R F +
Sbjct: 311 NP-------FFHYLAVGRARGFRPTPFGLGTWPAQ 338
>gi|251825700|gb|ACT20900.1| protease [Pseudomonas aeruginosa]
Length = 126
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 44/124 (35%), Gaps = 14/124 (11%)
Query: 54 VARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRYD----SRYFMEI 102
+ +L WS V + F + D+ F + + P + + I
Sbjct: 5 QTKLSLQSWSDVAKINFVDAGQGEQGDLVFGNFSSSVGGAAFAFLPDVQDALKGQSWYLI 64
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTS 161
N + G HEIGH LGL HPG YN G D Y D+ S
Sbjct: 65 NSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYS 122
Query: 162 VMSY 165
VMSY
Sbjct: 123 VMSY 126
>gi|240138807|ref|YP_002963282.1| hypothetical protein MexAM1_META1p2211 [Methylobacterium extorquens
AM1]
gi|240008779|gb|ACS40005.1| hypothetical protein MexAM1_META1p2211 [Methylobacterium extorquens
AM1]
Length = 1022
Score = 98.3 bits (243), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 76/253 (30%), Gaps = 58/253 (22%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS------- 448
FD Y +Y D+ + G RHY+ HG EGR+P A F L Y
Sbjct: 20 PFFDPAFYRSAYPDV----AAGGGDPLRHYLDHGWLEGRDPSAVFSTLFYADRHFADRAL 75
Query: 449 -HEDLINAFADAPDLVQVGKD-----HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ L A + ++V G E FD+ Y R
Sbjct: 76 INPLLHYAGLSPTERLRVATQPGPDFPSLQAGVAE---PYFDAPYYA------RLAGLEG 126
Query: 503 RGAAARHYITHGVKEGRNPD-AFKALEYI------------------------ASHEDLI 537
HY+T G + G +P+ AF Y+ AS
Sbjct: 127 GEDPLTHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQASEAAAP 186
Query: 538 NAFADAPDLVQAGKDHFSNFGYE--EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
A P D + E + F+ + YL + D+ +H++
Sbjct: 187 PARRAKPQAALPPADPAEASDAQIYETVAAAFDREHYLDTNPDIRR----SGIDPVRHFL 242
Query: 596 THGMKEGRALGIS 608
G +E R
Sbjct: 243 DFGAREDRDPSPD 255
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 13/95 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL + D+R G D RH++ G +E R+P F Y + I A
Sbjct: 218 FDREHYLDTNPDIRRS-GID---PVRHFLDFGAREDRDPSPDFSVRFYRKHYRREIGAGV 273
Query: 458 DAPDLVQVGKDHFSNFGCEEG-RFVTFDSYLYLGS 491
+ H+ G R F +
Sbjct: 274 NP-------FFHYLAVGRARDFRPTPFGLGTWPAQ 301
>gi|113476758|ref|YP_722819.1| G-D-S-L family lipolytic protein [Trichodesmium erythraeum IMS101]
gi|110167806|gb|ABG52346.1| lipolytic enzyme, G-D-S-L [Trichodesmium erythraeum IMS101]
Length = 418
Score = 98.3 bits (243), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 80/231 (34%), Gaps = 17/231 (7%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
+ K Y ++ + + + ++ + HF FG E RD + F++ YL +
Sbjct: 1 MALTIDKLFDEQFYLETHPGVAEAVANNIISDGFFHFTRFGQFEDRDPSRIFNTNFYLTT 60
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
+ + H+I G E R+P A Y+ + DL + P
Sbjct: 61 NPGVATAVEQNILTPTEHFINFGQFEQRDPSALLNTSFYLERYPDLAEVVVNTPL---TA 117
Query: 467 KDHFSNFGCEEGRFVTF---DSYLYLGSYDDLRN--VFGSDRGAAARHYIT---HGVKEG 518
+HF NFG EGR D Y++ S D N + A ++ EG
Sbjct: 118 TEHFLNFGQFEGRLPRLLFSDIYVFGDSLSDTGNLLAAAENFLGATDEFVLEFFAPYFEG 177
Query: 519 RNPDAFKALEYIASHEDLI--NAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
R + +E +A +L A G + N EG F
Sbjct: 178 RLSNGPVWVETLAPQLELTSDPNLNFAVSGATTGISNNGNNRLPEGTPPIF 228
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 10/150 (6%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL ++ + ++ + H+ G E R+P F Y+ ++ + A
Sbjct: 9 FDEQFYLETHPGVAEAVANNIISDGFFHFTRFGQFEDRDPSRIFNTNFYLTTNPGVATAV 68
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ +HF NFG E R + N YL Y DL V + A +H++ G
Sbjct: 69 EQN---ILTPTEHFINFGQFEQRDPSALLNTSFYLERYPDLAEVVVNTPLTATEHFLNFG 125
Query: 599 MKEGRALGISGMQFKSVMNLSEKSRDKADL 628
EGR + + F + + D +L
Sbjct: 126 QFEGR---LPRLLFSDIYVFGDSLSDTGNL 152
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 8/148 (5%)
Query: 343 RLRFA--DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-- 398
F Q D + + Y + + + Q++ +HF FG E RD +
Sbjct: 34 FFHFTRFGQFEDRDPSRIFNTNFYLTTNPGVATAVEQNILTPTEHFINFGQFEQRDPSAL 93
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLINAF 456
++ YL Y DL V + A H++ G EGR P + Y+ S D N
Sbjct: 94 LNTSFYLERYPDLAEVVVNTPLTATEHFLNFGQFEGRLPRLLFSDIYVFGDSLSDTGNLL 153
Query: 457 ADAPDLVQVGKDHFSNF--GCEEGRFVT 482
A A + + + F EGR
Sbjct: 154 AAAENFLGATDEFVLEFFAPYFEGRLSN 181
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+ +H + A A+ ++ G HF+ FG E R + FN + YLT+ +
Sbjct: 8 LFDEQFYLETHPGVAEAVANN--IISDGFFHFTRFGQFEDRDPSRIFNTNFYLTTNPGVA 65
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALG 606
+ +H+I G E R
Sbjct: 66 TAVEQNILTPTEHFINFGQFEQRDPS 91
Score = 38.6 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 25/68 (36%)
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
A +Q+ L+ E Q + Y Y DL +V+ + +HF F
Sbjct: 65 ATAVEQNILTPTEHFINFGQFEQRDPSALLNTSFYLERYPDLAEVVVNTPLTATEHFLNF 124
Query: 390 GLSEGRDI 397
G EGR
Sbjct: 125 GQFEGRLP 132
>gi|254561411|ref|YP_003068506.1| hypothetical protein METDI2994 [Methylobacterium extorquens DM4]
gi|254268689|emb|CAX24648.1| hypothetical protein METDI2994 [Methylobacterium extorquens DM4]
Length = 1022
Score = 97.9 bits (242), Expect = 6e-18, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 78/249 (31%), Gaps = 50/249 (20%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS------- 448
FD Y +Y D+ + G RHY+ HG EGR+P A F L Y
Sbjct: 20 PFFDPAFYRSAYPDV----AAGGGDPLRHYLDHGWLEGRDPSAVFSTLFYADRHFADRAA 75
Query: 449 -HEDLINAFADAPDLVQVGKDHFSNF-GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ L A + ++V +F + G + Y L G D
Sbjct: 76 INPLLHYAALSPTERLRVATQPGPDFPSLQAGVVEPYFDAPYYARLAGLEG--GED---P 130
Query: 507 ARHYITHGVKEGRNPD-AFKALEYI------------------------ASHEDLINAFA 541
HY+T G + G +P+ AF Y+ AS A
Sbjct: 131 LTHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQASEAAAPPARR 190
Query: 542 DAPDLVQAGKDHFSNFGYE--EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P D + E + F+ + YL + D+ +H++ G
Sbjct: 191 AKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRR----SGIDPVRHFLDFGA 246
Query: 600 KEGRALGIS 608
+E R
Sbjct: 247 REDRDPSPD 255
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 79/294 (26%), Gaps = 93/294 (31%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYD 409
++ Y ++Y D+ G + ++H+ + G EGRD + F + Y +
Sbjct: 15 AAIAAPFFDPAFYRSAYPDVAAGGG----DPLRHYLDHGWLEGRDPSAVFSTLFYADRHF 70
Query: 410 DLRNVFG-----------------------------------------------SDRGAA 422
R
Sbjct: 71 ADRAAINPLLHYAALSPTERLRVATQPGPDFPSLQAGVVEPYFDAPYYARLAGLEGGEDP 130
Query: 423 ARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADA---------------------- 459
HY+T G + G +P+ AF Y+ H +
Sbjct: 131 LTHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQASEAAAPPARR 190
Query: 460 ----PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
L+ S+ E FD YL + D+R G D RH++ G
Sbjct: 191 AKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRRS-GID---PVRHFLDFGA 246
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG-RSITF 567
+E R+P F Y + I A + H+ G G R F
Sbjct: 247 REDRDPSPDFSVRFYRKHYRREIGAGVNP-------FFHYLAVGRARGFRPTPF 293
>gi|188581427|ref|YP_001924872.1| glycosyl transferase family 2 [Methylobacterium populi BJ001]
gi|179344925|gb|ACB80337.1| glycosyl transferase family 2 [Methylobacterium populi BJ001]
Length = 995
Score = 97.5 bits (241), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 77/251 (30%), Gaps = 52/251 (20%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS------ 448
FD Y +Y D+ + G HY+ HG EGR+P A F L YI
Sbjct: 13 SPFFDPAFYRDAYPDV----AAGGGDPLVHYLDHGWLEGRDPSAVFSTLFYIDRHLADRA 68
Query: 449 --HEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRG 504
+ L A + ++V +F + FD+ Y R
Sbjct: 69 PVNPLLHYAGLSPAERLRVATQPGPDFPVLQAAIAEPFFDAPFYA------RLAGLEGGE 122
Query: 505 AAARHYITHGVKEGRNPD-AFKALEYIASHEDL-------------------INAFADAP 544
HY+T G + G +P+ AF Y+ H + A
Sbjct: 123 DPLSHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQATEAAGTPA 182
Query: 545 DLVQAGKDHFSNFGYE-------EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
++ E E + F+ + YL + D+ +H++
Sbjct: 183 RRAKSQAAPLPADPAEASDAQIYETVAAAFDREHYLETNPDIRR----SGVDPVRHFLDF 238
Query: 598 GMKEGRALGIS 608
G +E R
Sbjct: 239 GAREDRDPSPD 249
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 80/303 (26%), Gaps = 94/303 (31%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FD 400
LRF + + Y +Y D+ G + + H+ + G EGRD + F
Sbjct: 1 MLRF-GRRDAATASPFFDPAFYRDAYPDVAAGGG----DPLVHYLDHGWLEGRDPSAVFS 55
Query: 401 SYLYLGSYDDLRN----------------------------------------------- 413
+ Y+ + R
Sbjct: 56 TLFYIDRHLADRAPVNPLLHYAGLSPAERLRVATQPGPDFPVLQAAIAEPFFDAPFYARL 115
Query: 414 VFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN------------------ 454
HY+T G + G +P+ AF Y+ H +
Sbjct: 116 AGLEGGEDPLSHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQAT 175
Query: 455 -AFADAPDLVQVGKDHF-------SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
A + S+ E FD YL + D+R G D
Sbjct: 176 EAAGTPARRAKSQAAPLPADPAEASDAQIYETVAAAFDREHYLETNPDIRRS-GVD---P 231
Query: 507 ARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG-RS 564
RH++ G +E R+P F Y + + + H+ G G R
Sbjct: 232 VRHFLDFGAREDRDPSPDFSVRFYRKHYRREVGPGVNP-------FFHYLVVGRARGFRP 284
Query: 565 ITF 567
F
Sbjct: 285 TPF 287
>gi|323139734|ref|ZP_08074772.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322395005|gb|EFX97568.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 992
Score = 97.5 bits (241), Expect = 6e-18, Method: Composition-based stats.
Identities = 53/291 (18%), Positives = 90/291 (30%), Gaps = 79/291 (27%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
Y A+Y D++ + HF+ +G EGR+ F + Y G
Sbjct: 24 DEKFYLAAYPDVVA----SGISAHDHFHNYGWKEGRNPASCFHTLYYAKKN----MPGGQ 75
Query: 418 DRGAAARHYITHGVKEGRNPDA---------------FKALEYIASHEDLINAFADAPDL 462
HY G K P F Y + +++
Sbjct: 76 LSMNPLLHYAQLGKKTATAPKTPAEWLEIQKKEIAYLFDETFYKRQYGPMLSWLEP---- 131
Query: 463 VQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYI--------- 511
DH+ G ++G FD+ Y+ L + H+I
Sbjct: 132 ----IDHYLESGWKQGFNPREDFDTQQYVALNSFLT----NSDINPFYHFIVTAENSRTQ 183
Query: 512 ------THGVKE--GRNPDA----------FKALEYIASHEDLINAFADAPDLVQAGKDH 553
G +E R + F A Y + D+ A + H
Sbjct: 184 AASSTQMGGDQESVAREAERMELITAIAPHFDARFYCDENPDIARAKVNP-------VSH 236
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
+ ++G++EGR+ T F + YL+S+ ++ HY+ HG + G
Sbjct: 237 YVDYGWKEGRNPTAYFWTNYYLSSHPEVKLA----GVNPFHHYLRHGRQNG 283
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 80/240 (33%), Gaps = 47/240 (19%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH--------E 450
D YL +Y D+ + +A H+ +G KEGRNP + F L Y +
Sbjct: 24 DEKFYLAAYPDVV----ASGISAHDHFHNYGWKEGRNPASCFHTLYYAKKNMPGGQLSMN 79
Query: 451 DLINAFADAPDLVQVGKDH--FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
L++ K + +E FD Y Y + +
Sbjct: 80 PLLHYAQLGKKTATAPKTPAEWLEIQKKEI-AYLFDETFYKRQYGPMLS-----WLEPID 133
Query: 509 HYITHGVKEGRNP-DAFKALEYIA-----SHEDLINAF----------ADAPDLVQAGKD 552
HY+ G K+G NP + F +Y+A ++ D+ + A Q G D
Sbjct: 134 HYLESGWKQGFNPREDFDTQQYVALNSFLTNSDINPFYHFIVTAENSRTQAASSTQMGGD 193
Query: 553 HFSNFGYEEGR------SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
S E + F+ Y D+ + HY+ +G KEGR
Sbjct: 194 QESVAREAERMELITAIAPHFDARFYCDENPDIARA----KVNPVSHYVDYGWKEGRNPT 249
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 65/202 (32%), Gaps = 51/202 (25%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFG 416
Y Y ++ + E + H+ E G +G + FD+ Y+ L +
Sbjct: 113 FDETFYKRQYGPMLSWL-----EPIDHYLESGWKQGFNPREDFDTQQYVA----LNSFLT 163
Query: 417 SDRGAAARHYI--------------THGVKE---GRNPDA----------FKALEYIASH 449
+ H+I G + R + F A Y +
Sbjct: 164 NSDINPFYHFIVTAENSRTQAASSTQMGGDQESVAREAERMELITAIAPHFDARFYCDEN 223
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY--LYLGSYDDLRNVFGSDRGAAA 507
D+ A + H+ ++G +EGR T + YL S+ +++
Sbjct: 224 PDIARAKVNP-------VSHYVDYGWKEGRNPTAYFWTNYYLSSHPEVKLAG----VNPF 272
Query: 508 RHYITHGVKEGRNPDAFKALEY 529
HY+ HG + G P+ +
Sbjct: 273 HHYLRHGRQNGLKPNPMGVERW 294
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
+ + Y D+ + + H+ ++G EGR+ T F + YL
Sbjct: 204 MELITAIAPHFDARFYCDENPDIARA----KVNPVSHYVDYGWKEGRNPTAYFWTNYYLS 259
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
S+ +++ HY+ HG + G P+
Sbjct: 260 SHPEVKLA----GVNPFHHYLRHGRQNGLKPNP 288
>gi|83593942|ref|YP_427694.1| hypothetical protein Rru_A2610 [Rhodospirillum rubrum ATCC 11170]
gi|83576856|gb|ABC23407.1| hypothetical protein Rru_A2610 [Rhodospirillum rubrum ATCC 11170]
Length = 1313
Score = 97.1 bits (240), Expect = 8e-18, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 69/167 (41%), Gaps = 16/167 (9%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNP-DAFKALEYIASHEDLI 453
+ FD+ YL +Y D+ + +A H+ +G KE RNP F A Y A + D++
Sbjct: 2 SLAFDTTSYLTTYPDVARAVSLGQFASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDVL 61
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFV-----TFDSYLYLGSYDDLRNVFGSDRGA-AA 507
NA + + HF FG EGR TFD +YL + D+ + A
Sbjct: 62 NAVSSG--VFPSVWAHFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVANGTMPSAL 119
Query: 508 RHYITHGVKEGRNPD------AFKALEYIASHEDLINAFADAPDLVQ 548
HY+ G+ EGR + S D+I A AP Q
Sbjct: 120 FHYVAFGMDEGRPSGQTFILTTAQDPFTGTSGADVIRGVAGAPVGAQ 166
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
+ FD+ YL +Y D+ + A A H+ +G KE RNP + F A Y A + D++
Sbjct: 2 SLAFDTTSYLTTYPDVARAVSLGQFASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDVL 61
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSI-----TFNPDLYLTSYDDLWNVFGSDRS-AAA 591
NA + + + HF FG EGR+ TF+ +YL + D+ + +A
Sbjct: 62 NAVSSG--VFPSVWAHFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVANGTMPSAL 119
Query: 592 QHYITHGMKEGRALG 606
HY+ GM EGR G
Sbjct: 120 FHYVAFGMDEGRPSG 134
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 7/104 (6%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDI--- 397
E Y A D++ + VF S HF FG++EGR
Sbjct: 31 EHFDQYGAKELRNPTSWFDAAYYAAQNPDVLNAVSSGVFPSVWAHFLAFGINEGRAPLEA 90
Query: 398 --TFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPD 438
TFD +YL + D+ + +A HY+ G+ EGR
Sbjct: 91 LATFDKAIYLAANTDVAAAVANGTMPSALFHYVAFGMDEGRPSG 134
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF Y+ ++ D+ A + + K+HF +G +E R+ T F+ Y D+
Sbjct: 4 AFDTTSYLTTYPDVARAVSLGQ--FASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDVL 61
Query: 581 NVFGSDRSAAA-QHYITHGMKEGRALGISGMQFKSVMNLSEKS 622
N S + H++ G+ EGRA + F + L+ +
Sbjct: 62 NAVSSGVFPSVWAHFLAFGINEGRAPLEALATFDKAIYLAANT 104
>gi|251825704|gb|ACT20902.1| protease [Bacillus sp. SRC-006]
Length = 124
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRYD----SRYFM 100
+ + +L W+ V ++ F + D+ F + + P + +
Sbjct: 1 RRTGQLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWY 60
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFL 159
IN + G HEIGH LGL HPG YN G D Y D+
Sbjct: 61 LINSSYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRA 118
Query: 160 TSVMSY 165
SVMSY
Sbjct: 119 YSVMSY 124
>gi|303288219|ref|XP_003063398.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455230|gb|EEH52534.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 895
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
N+H +D L E+L A+ + ++ D +Q Q E + H E
Sbjct: 151 NKHLEDIL---EKLTAAENKLSEKLTANTNLGGKIHDRTDFVQKALQ-KVEKLHHALEGS 206
Query: 391 LSE-GRDITFD-SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-----AFKAL 443
L+ +DI+ D + YL Y DL FG + AA H++ HG E R D +A
Sbjct: 207 LANIDKDISDDQAKCYLHRYRDLSRAFGHNIAAAKNHWVDHGRHEHRTLDCDYMTTEEAK 266
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
Y+ + DL+ AF + K H++ G +EGR
Sbjct: 267 CYVNRYSDLLRAFGHN---IGAAKRHWNKHGKKEGR 299
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++D + Q L VE+L A + ++ Y Y DL + G ++
Sbjct: 179 GGKIHDRTDFVQKALQKVEKLHHALEGSLANIDKDISDDQAKCYLHRYRDLSRAFGHNIA 238
Query: 381 ESMKHFYEFGLSEGRDITFD------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ H+ + G E R + D + Y+ Y DL FG + GAA RH+ HG KEG
Sbjct: 239 AAKNHWVDHGRHEHRTLDCDYMTTEEAKCYVNRYSDLLRAFGHNIGAAKRHWNKHGKKEG 298
Query: 435 RN 436
R+
Sbjct: 299 RD 300
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 509 HYITHGVKEGRNPDAFKALE--YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
H+ G + D Y+ + DL AF + A K+H+ + G E R++
Sbjct: 200 HHALEGSLANIDKDISDDQAKCYLHRYRDLSRAFGHN---IAAAKNHWVDHGRHEHRTLD 256
Query: 567 FN------PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ Y+ Y DL FG + AA +H+ HG KEGR
Sbjct: 257 CDYMTTEEAKCYVNRYSDLLRAFGHNIGAAKRHWNKHGKKEGR 299
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 8/103 (7%)
Query: 530 IASHEDLINAFADAPD-LVQAGKDHFSNFGYEEGRSITFN-------PDLYLTSYDDLWN 581
+ ++ +L D D + +A + EG + YL Y DL
Sbjct: 172 LTANTNLGGKIHDRTDFVQKALQKVEKLHHALEGSLANIDKDISDDQAKCYLHRYRDLSR 231
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
FG + +AA H++ HG E R L M + + D
Sbjct: 232 AFGHNIAAAKNHWVDHGRHEHRTLDCDYMTTEEAKCYVNRYSD 274
>gi|251825712|gb|ACT20906.1| protease [Enterococcus sp. RSC]
Length = 123
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 14/122 (11%)
Query: 56 RWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRYD----SRYFMEINF 104
+ +L W+ V ++ F + D+ F + + P + + IN
Sbjct: 4 QLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINS 63
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVM 163
+ G HEIGH LGL HPG YN G D Y D+ SVM
Sbjct: 64 SYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSVM 121
Query: 164 SY 165
SY
Sbjct: 122 SY 123
>gi|119493877|ref|ZP_01624442.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119452389|gb|EAW33580.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 538
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 18/183 (9%)
Query: 399 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA--FKALEYIASHEDLINA 455
FD YL Y L+ + H+ G++ G + + Y+ + D+ A
Sbjct: 6 FDEDYYLKKYPYLQPAIEQGIIQSGLDHFQRFGLQLGLTGVSRYYDEAYYLEKNPDVAEA 65
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR---FVTFDSYLYLGSYDDLRNVFGSDRG-------A 505
+ G HF G EEGR + + Y + D+ D
Sbjct: 66 V--NSGIFPSGLAHFIEIGYEEGRADISSDYHDFFYRQTNRDILPFIRVDTSESNGLFHN 123
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG-YEEGRS 564
A H++ G +EGR ++F EY+ + ++I A +++ G+DH+ FG +EEGR
Sbjct: 124 ALEHFLKFGAEEGRYSNSFFEAEYLKQYPNIIPAIESG--VLRTGRDHYEQFGQFEEGRK 181
Query: 565 ITF 567
TF
Sbjct: 182 ATF 184
Score = 87.1 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Query: 339 SDVERL-RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGR- 395
S ++ RF Q + + Y D+ + + +F + HF E G EGR
Sbjct: 29 SGLDHFQRFGLQLGLTGVSRYYDEAYYLEKNPDVAEAVNSGIFPSGLAHFIEIGYEEGRA 88
Query: 396 DITFD--SYLYLGSYDDLRNVFGSDR-------GAAARHYITHGVKEGRNPDAFKALEYI 446
DI+ D + Y + D+ D A H++ G +EGR ++F EY+
Sbjct: 89 DISSDYHDFFYRQTNRDILPFIRVDTSESNGLFHNALEHFLKFGAEEGRYSNSFFEAEYL 148
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFG-CEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ ++I A +++ G+DH+ FG EEGR TF + D+ FG+
Sbjct: 149 KQYPNIIPAIESG--VLRTGRDHYEQFGQFEEGRKATFIGTSSI----DILESFGTGE 200
Score = 87.1 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 71/189 (37%), Gaps = 15/189 (7%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE---EGRFVTFDSYLYLGSY 492
N D F Y+ + L A ++Q G DHF FG + G +D YL
Sbjct: 2 NFDIFDEDYYLKKYPYLQPAIEQG--IIQSGLDHFQRFGLQLGLTGVSRYYDEAYYLEKN 59
Query: 493 DDLRNVFGSDRGA-AARHYITHGVKEGRNPDAFKA--LEYIASHEDLINAF----ADAPD 545
D+ S H+I G +EGR + Y ++ D++ +++
Sbjct: 60 PDVAEAVNSGIFPSGLAHFIEIGYEEGRADISSDYHDFFYRQTNRDILPFIRVDTSESNG 119
Query: 546 LVQAGKDHFSNFGYEEGR-SITFNPDLYLTSYDDLWNVFGSD-RSAAAQHYITHG-MKEG 602
L +HF FG EEGR S +F YL Y ++ S HY G +EG
Sbjct: 120 LFHNALEHFLKFGAEEGRYSNSFFEAEYLKQYPNIIPAIESGVLRTGRDHYEQFGQFEEG 179
Query: 603 RALGISGMQ 611
R G
Sbjct: 180 RKATFIGTS 188
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 49/305 (16%), Positives = 87/305 (28%), Gaps = 60/305 (19%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFES-------MKHFYEFGLSEGR-DITFDSYLYLGS 407
Y + D++ I D ES ++HF +FG EGR +F YL
Sbjct: 91 SSDYHDFFYRQTNRDILPFIRVDTSESNGLFHNALEHFLKFGAEEGRYSNSFFEAEYLKQ 150
Query: 408 YDDLRNVFGSD-RGAAARHYITHGVKE-GRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
Y ++ S HY G E GR A S D++ +F +
Sbjct: 151 YPNIIPAIESGVLRTGRDHYEQFGQFEEGRK-----ATFIGTSSIDILESFGTGEVELIG 205
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN--PDA 523
E + + + Y + + + + G+ R+ P+
Sbjct: 206 LP---VRLDNNERTYFKYSA--YFIQDTLIGSSASDTFVIGVDNSLFSGIIFPRDVSPND 260
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGK---DHF-------------------------- 554
F + +I + D ++ G D++
Sbjct: 261 FYYTHSTYGGKAVIKNYDPNNDFIKLGHVSPDYYRFDTDQISRVNILSNKGGILATVEGI 320
Query: 555 -------SNFGYEEGRSITFNPDLYLTSYDDLWNVF-GSDRSAAAQHYITHG-MKEGRAL 605
+G ++ F D YL D+ + + + HY G R+
Sbjct: 321 TDIEDLNIIYGNKKVAERNFFEDYYLLKNPDVKALVEAGNYRSGLDHYEQVGQFDASRSA 380
Query: 606 GISGM 610
G
Sbjct: 381 TFIGT 385
>gi|227357924|ref|ZP_03842270.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
gi|227161897|gb|EEI46921.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
Length = 394
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 74/255 (29%), Gaps = 81/255 (31%)
Query: 39 RLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN---------- 86
L F +T + P+ QEV L S DLTF I +
Sbjct: 143 PLYFSVTTMTIFPHQQEVVTEILQLASDFADLTFTRVPIQKNANLKFGYYKQFATGYYMT 202
Query: 87 ----GYVCTPRYDSR------------------------------------YFMEINFDK 106
G+ P Y+ ++E +
Sbjct: 203 RETVGFASKPNYNGTPIKEIGQNESYDFSGSIFINLASHDFYQWVKRDNLDKYIENEANI 262
Query: 107 ADVWRYGIGK----------------------GTILSHNALHEIGHALGLMHPGSYNGGY 144
D++ Y G+ + + LHE+GHALGL H +Y
Sbjct: 263 GDLYNYHDNNQVAIIKSTDVLLNETMKSKHKLGSQIYYVFLHELGHALGLEHIDAYLKNI 322
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-G 203
++ ++ +VM D Y T M+ DI+ +Q +YG +
Sbjct: 323 KNSAIE------TYKYTVMGMGFADIKDADFGGLYPMTFMLVDILLLQYLYGPNMTTRLE 376
Query: 204 NNIYKIEVQQKDSPF 218
NN Y + +
Sbjct: 377 NNTYGFNSNTGRAAY 391
>gi|307152381|ref|YP_003887765.1| LVIVD repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306982609|gb|ADN14490.1| LVIVD repeat protein [Cyanothece sp. PCC 7822]
Length = 1290
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+ YK V + + +GG D LD + V ++L T + ++ +T+
Sbjct: 1054 GNDSYKYSVISQLGSDTISETATGGTDTLDFSG-TLVDVKVNLGTTTSQTVVTNNLKLTL 1112
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + VIE+++G SG+D +IGNS NN GND G G D+ A +
Sbjct: 1113 SANNVIENIIGGSGSDRLIGNSLNNTLTGGDGNDNLSGGGGNDSLDGAAGNDNLTGGAGN 1172
Query: 323 NAII-----VYDANEHKQDFLSDV----ERLRFADQCIDSVNVKQRSIL 362
+ + + +++ D ++D +++ + +N + L
Sbjct: 1173 DRYLYQTGRAFVSSDLGVDTINDFTSVADKIVLSKATFSVLNSAVGNGL 1221
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 19/194 (9%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ ++ ++++ + Q S D S Y TP + A ++ + ++
Sbjct: 904 NNVTVLENNEAYAILTVTLNQASSQDISVNYTTTP----VTATPEL----DYTPISDTLV 955
Query: 209 IEVQQKDSPFIQTIYDSG---GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
IE + I + D+ +T V I + + +++
Sbjct: 956 IEANSTTASLFIPIVNDNISEADETFKVTFSNPVNVNIASGVGTVTITDTLSSSVSTILP 1015
Query: 266 TVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +E++ +GN GNS NN+ +SGN+V G +G D SY Y + +
Sbjct: 1016 SGVENLKLTGTGNINGTGNSGNNLLIGNSGNNVLAGGNGND-------SYKYSVISQLGS 1068
Query: 325 IIVYDANEHKQDFL 338
+ + D L
Sbjct: 1069 DTISETATGGTDTL 1082
>gi|220925425|ref|YP_002500727.1| group 1 glycosyl transferase [Methylobacterium nodulans ORS 2060]
gi|219950032|gb|ACL60424.1| glycosyl transferase group 1 [Methylobacterium nodulans ORS 2060]
Length = 1239
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 80/228 (35%), Gaps = 38/228 (16%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-----------------NPD 438
D FD Y Y DL + G R + +HY+ HG +EGR P+
Sbjct: 25 DTEFDHEFYSRLYPDLHRLKG--RKSLLKHYVEHGRREGRFATVDAYMADLVAKYGEAPE 82
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
F Y + DL F DA HF G E R D+ + R+
Sbjct: 83 DFDPGLYRELNPDLTAQFTDAWQFTA----HFLKHGRAEDRRYRLDTSAETAEFT--RDA 136
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G + A + HG+ GR F ++ + D I P G F G
Sbjct: 137 GGMSKDAFLQ---DHGLAAGRWQLRFDLAQFRQLNADWIT---TPPATRSEGIRLFVESG 190
Query: 559 YEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
+ I F+P Y +Y D +A +H+++ G+++
Sbjct: 191 IDRLAPINGDSIFDPAFYRAAYP---VDRNLDDAALYRHWLSVGIEQN 235
Score = 44.0 bits (102), Expect = 0.088, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+ + Y Y DL + G R + +HY+ HG +EGR + V E D
Sbjct: 28 FDHEFYSRLYPDLHRLKG--RKSLLKHYVEHGRREGRFATVDAYMADLVAKYGEAPED 83
>gi|329114937|ref|ZP_08243693.1| Hypothetical protein APO_1741 [Acetobacter pomorum DM001]
gi|326695834|gb|EGE47519.1| Hypothetical protein APO_1741 [Acetobacter pomorum DM001]
Length = 985
Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/325 (16%), Positives = 106/325 (32%), Gaps = 30/325 (9%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF---GLSEGRDITFDSYLYL 405
I +++ Y A Y D+++ + + E ++ FY L + FD YL
Sbjct: 12 GNIKTIDWSVFDATWYAAKYGDVLKFLDLEGAEVLEEFYREKGPALRHSPNPYFDEDWYL 71
Query: 406 GSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
Y + G + + HY G F Y H L A +
Sbjct: 72 RRYPAVAEAVGKGEWRSGFDHYCQTGFSSHNPHWLFDREFYFKQHPTLQPATLEEAGFRN 131
Query: 465 VGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDLRNVFGSDRGAAARHYIT----HGVKEG 518
+ DH+ N G E+ ++ ++ YL S + G A + +G
Sbjct: 132 L-YDHYLNVGDEQFLTGSWFFNATAYLKSGH--ARIEGLGAFAQCVRNLRPEQGYGQ--- 185
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F Y+ ++ + A + H+ + + F+ + Y +
Sbjct: 186 RLSWYFDPEWYLETYPHVGKELASG--RWLSALHHYLSNSTPTDYNPNAYFSEEFYGSVN 243
Query: 577 DDLWNVFGSDR-SAAAQHYITHGMKEGRALGISGMQFKSVMN-LSEKSRDKADLSLSFDH 634
D+ S +H++ +G+ E R + N + +K + D +F H
Sbjct: 244 HDVSGAVESGNFRNFYEHFLRYGVHELRKPSANIDLESYYRNAVVQKEVTRGDFPDAFAH 303
Query: 635 KKVDLYTDYFGDGNYYDSDLYSMHD 659
Y G + D+ + +
Sbjct: 304 --------YIAHGGRLEDDMEELKE 320
>gi|300864551|ref|ZP_07109414.1| hypothetical protein OSCI_950011 [Oscillatoria sp. PCC 6506]
gi|300337450|emb|CBN54562.1| hypothetical protein OSCI_950011 [Oscillatoria sp. PCC 6506]
Length = 328
Score = 95.6 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 14/181 (7%)
Query: 399 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRN--PDAFKALEYIASHEDLINA 455
FD YL Y +++ G+ H+ G G F Y+A + DL
Sbjct: 7 FDEQYYLSQYGFVKDAVDRGLIGSGKEHFERFGQAAGLTKISRYFDEETYLAGNPDLTPF 66
Query: 456 F--ADAPDLVQVGKDHFSNFGCEEGR-----FVTFDSYLYLGSYDDLRNVFGSDRG-AAA 507
+ G DHF FG EEG ++ YL + +L + +
Sbjct: 67 VRTVNPNAPFASGLDHFIQFGYEEGARRTQVSPEYNEDFYLRNNSELLPFIQNGTFKSGY 126
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE-GRSIT 566
+H+I +GV+EGR +F EY+ + +L+ ++ G+DH+ FG E RS T
Sbjct: 127 QHFIQYGVEEGRFGTSFFEPEYLEQNPNLVPFI--NSGALKTGRDHYFQFGQFEVNRSAT 184
Query: 567 F 567
F
Sbjct: 185 F 185
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 69/187 (36%), Gaps = 19/187 (10%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT---FDSYLYLGSYDD 494
D F Y++ + + +A L+ GK+HF FG G FD YL D
Sbjct: 5 DIFDEQYYLSQYGFVKDAVDRG--LIGSGKEHFERFGQAAGLTKISRYFDEETYLAGNPD 62
Query: 495 LRNVF-----GSDRGAAARHYITHGVKEG-RNPDA---FKALEYIASHEDLINAFADAPD 545
L + + H+I G +EG R + Y+ ++ +L+ +
Sbjct: 63 LTPFVRTVNPNAPFASGLDHFIQFGYEEGARRTQVSPEYNEDFYLRNNSELLPFIQNGT- 121
Query: 546 LVQAGKDHFSNFGYEEGR-SITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKE-G 602
++G HF +G EEGR +F YL +L S HY G E
Sbjct: 122 -FKSGYQHFIQYGVEEGRFGTSFFEPEYLEQNPNLVPFINSGALKTGRDHYFQFGQFEVN 180
Query: 603 RALGISG 609
R+ G
Sbjct: 181 RSATFVG 187
Score = 74.4 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 18/186 (9%)
Query: 314 YLYKIYRFENAIIVYDANEHKQD---FLSDVERL-RFADQCIDSVNVKQRSILEYTASYE 369
Y I+ + + Y + D S E RF + + Y A
Sbjct: 2 ANYDIFDEQYYLSQYGFVKDAVDRGLIGSGKEHFERFGQAAGLTKISRYFDEETYLAGNP 61
Query: 370 DLIQVI-----GQDVFESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLRNVFGSDR 419
DL + + HF +FG EG ++ YL + +L +
Sbjct: 62 DLTPFVRTVNPNAPFASGLDHFIQFGYEEGARRTQVSPEYNEDFYLRNNSELLPFIQNGT 121
Query: 420 -GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE- 477
+ +H+I +GV+EGR +F EY+ + +L+ ++ G+DH+ FG E
Sbjct: 122 FKSGYQHFIQYGVEEGRFGTSFFEPEYLEQNPNLVPFI--NSGALKTGRDHYFQFGQFEV 179
Query: 478 GRFVTF 483
R TF
Sbjct: 180 NRSATF 185
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR---SITFNPDLYLTSY 576
N D F Y++ + + +A L+ +GK+HF FG G S F+ + YL
Sbjct: 3 NYDIFDEQYYLSQYGFVKDAV--DRGLIGSGKEHFERFGQAAGLTKISRYFDEETYLAGN 60
Query: 577 DDLWNVFGSDRSAA-----AQHYITHGMKEGRALGISGMQFKSVMNLSEKS 622
DL + A H+I G +EG ++ L S
Sbjct: 61 PDLTPFVRTVNPNAPFASGLDHFIQFGYEEGARRTQVSPEYNEDFYLRNNS 111
>gi|303285997|ref|XP_003062288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455805|gb|EEH53107.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 902
Score = 95.6 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
N+H +D L E+L A+ + + D +Q Q E + H E
Sbjct: 163 NKHLEDIL---EKLTAAENKLSEKLTGNTDLGGRIHDRTDFVQKALQ-KVEKLHHALEGS 218
Query: 391 LSE-GRDITFD-SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-----AFKAL 443
L+ +DI+ D + YL Y DLR FG + A +H++ HG E R D +A
Sbjct: 219 LANIDKDISDDQAKCYLHRYRDLRGAFGHNIARAKKHWVDHGRHEHRTLDCDYITNEEAQ 278
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
Y+ + DL AF + K H++ G +EGR DS+
Sbjct: 279 CYLNRYSDLRRAFGHN---IGAAKRHWNKHGKKEGRDKECDSH 318
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEYTASYEDLIQV 374
+ ++D + Q L VE+L A + ++ Y Y DL
Sbjct: 185 TGNTDLGGRIHDRTDFVQKALQKVEKLHHALEGSLANIDKDISDDQAKCYLHRYRDLRGA 244
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFD------SYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G ++ + KH+ + G E R + D + YL Y DLR FG + GAA RH+
Sbjct: 245 FGHNIARAKKHWVDHGRHEHRTLDCDYITNEEAQCYLNRYSDLRRAFGHNIGAAKRHWNK 304
Query: 429 HGVKEGRN 436
HG KEGR+
Sbjct: 305 HGKKEGRD 312
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 51/137 (37%), Gaps = 16/137 (11%)
Query: 446 IASHEDLINAFADAPDLVQVGKDHF-SNFGCEEGRFVTFD-------SYLYLGSYDDLRN 497
+ + DL D D VQ EG D + YL Y DLR
Sbjct: 184 LTGNTDLGGRIHDRTDFVQKALQKVEKLHHALEGSLANIDKDISDDQAKCYLHRYRDLRG 243
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFK-----ALEYIASHEDLINAFADAPDLVQAGKD 552
FG + A +H++ HG E R D A Y+ + DL AF + A K
Sbjct: 244 AFGHNIARAKKHWVDHGRHEHRTLDCDYITNEEAQCYLNRYSDLRRAFGHN---IGAAKR 300
Query: 553 HFSNFGYEEGRSITFNP 569
H++ G +EGR +
Sbjct: 301 HWNKHGKKEGRDKECDS 317
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 509 HYITHGVKEGRNPDAFKALE--YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
H+ G + D Y+ + DL AF + K H+ + G E R++
Sbjct: 212 HHALEGSLANIDKDISDDQAKCYLHRYRDLRGAFGHN---IARAKKHWVDHGRHEHRTLD 268
Query: 567 FN------PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ YL Y DL FG + AA +H+ HG KEGR
Sbjct: 269 CDYITNEEAQCYLNRYSDLRRAFGHNIGAAKRHWNKHGKKEGR 311
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
Query: 530 IASHEDLINAFADAPD-LVQAGKDHFSNFGYEEGRSITFN-------PDLYLTSYDDLWN 581
+ + DL D D + +A + EG + YL Y DL
Sbjct: 184 LTGNTDLGGRIHDRTDFVQKALQKVEKLHHALEGSLANIDKDISDDQAKCYLHRYRDLRG 243
Query: 582 VFGSDRSAAAQHYITHGMKEGRAL 605
FG + + A +H++ HG E R L
Sbjct: 244 AFGHNIARAKKHWVDHGRHEHRTL 267
>gi|302337197|ref|YP_003802403.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
gi|301634382|gb|ADK79809.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
Length = 1100
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 18/133 (13%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLI 453
R FD YL DL RH++ G K RNP+AF + Y ++ D+
Sbjct: 48 RSAIFDENYYLRKNPDLYYT----TANLMRHFLLTGYKAYRNPNAFFDSKYYEETYPDVK 103
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ H+ +G EEG+ FD+ YL SY D+ HYI
Sbjct: 104 KVGMNP-------VIHYIMYGVEEGKNPHPEFDTLFYLRSYPDVAEKG----VNPLGHYI 152
Query: 512 THGVKEGRNPDAF 524
G ++G P+ F
Sbjct: 153 KIGWRKGNRPNPF 165
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 16/135 (11%)
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ R FD YL DL + RH++ G K RNP+AF +Y
Sbjct: 39 YLREKKLLTRSAIFDENYYLRKNPDLYYTTAN----LMRHFLLTGYKAYRNPNAFFDSKY 94
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSDR 587
+ P + H+ +G EEG++ F+ YL SY D+
Sbjct: 95 YEETYPDVKKVGMNPVI------HYIMYGVEEGKNPHPEFDTLFYLRSYPDVAEK----G 144
Query: 588 SAAAQHYITHGMKEG 602
HYI G ++G
Sbjct: 145 VNPLGHYIKIGWRKG 159
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITF 399
Y +Y D+ +V + H+ +G+ EG++ F
Sbjct: 73 RHFLLTGYKAYRNPNAFFDSKYYEETYPDVKKV----GMNPVIHYIMYGVEEGKNPHPEF 128
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
D+ YL SY D+ HYI G ++G P+ F
Sbjct: 129 DTLFYLRSYPDVAE----KGVNPLGHYIKIGWRKGNRPNPF 165
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 16/97 (16%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y+ + DL A+ HF GY+ R+ F+ Y +Y D+
Sbjct: 52 FDENYYLRKNPDLYYTTAN-------LMRHFLLTGYKAYRNPNAFFDSKYYEETYPDVKK 104
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
V + HYI +G++EG+ +F ++ L
Sbjct: 105 VGMN----PVIHYIMYGVEEGKN---PHPEFDTLFYL 134
>gi|211971002|dbj|BAG82830.1| hypothetical protein [Pasteurella pneumotropica]
Length = 1377
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 78/226 (34%), Gaps = 21/226 (9%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK--------FISSNN 86
T +S ++ +E R++ E K V++ F E D +N+
Sbjct: 829 WNTESISGYESDYTDREKESIRFSYREIEKYVNVKFVEVENVIDADSKVYKAKINDRNND 888
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ + A++ + + + +HEIGH L L H N G+
Sbjct: 889 TILGLASPGGNLALNGGSLSANLDNPTLKASSY--NTNIHEIGHTLQLAHSAGENKGF-- 944
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNN 205
YE S +V SY ++ + D+ + YG + GN+
Sbjct: 945 -----TYEETS-EFTVESYNGAMSLKQGTIVSRYSSLHLFDLATLHYRYGVNPEARKGND 998
Query: 206 IYKI-EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
Y + +S I+D G D+ D + N ++L SW
Sbjct: 999 TYGFKDYNATESDGALYIWDGAGIDVFDASNEKIGVN-VNLTPGSW 1043
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 77/231 (33%), Gaps = 28/231 (12%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFFYYAP 312
I T IE+++GS D + GN+A+N +G+DV G +G DT +
Sbjct: 1140 IGYGTQIENLIGSDYADTLTGNNADNNIQGGAGDDVIRGGAGNDYLDGGIGIDTMYGGIG 1199
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--------DVERLRFADQCI-DSVNVKQRSILE 363
Y + + ++ ANE LS +VE L + Q +++
Sbjct: 1200 DDRY-VVDNKEDKVIELANEGTDTVLSLVDYRLSENVENLTLLGTTAKLATGNAQDNVIM 1258
Query: 364 YTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L+ G D G EG D TF L D+ F +
Sbjct: 1259 ANNMGNTLVGEAGDDRLIGGLGADILIGG--EGND-TFVFQTELNGNIDIITDFETGDKI 1315
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
A I + +G +YI + F +A HF+
Sbjct: 1316 ALSTLIFKSLSKGME----NISDYIQYNAKDGKLFYNADGNSNRDSVHFAT 1362
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 34/203 (16%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYID 244
+ + +YG +G++ Y ++ K+ I+ + G D + D L V+N
Sbjct: 1189 IGIDTMYG----GIGDDRYVVD--NKEDKVIEL--ANEGTDTVLSLVDYRLSENVENLTL 1240
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L T + + G + N+ +A + ++VG +G+D +IG ++ GND F
Sbjct: 1241 LGTTAKLATGNAQDNVIMANNMGN-TLVGEAGDDRLIGGLGADILIGGEGNDTF------ 1293
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+++ N I+ D + LS L F + + ++Y
Sbjct: 1294 ----------VFQTELNGNIDIITDFETGDKIALS---TLIF--KSLSKGMENISDYIQY 1338
Query: 365 TASYEDLIQVIGQDVFESMKHFY 387
A L + HF
Sbjct: 1339 NAKDGKLFYNADGNSNRDSVHFA 1361
>gi|194337580|ref|YP_002019374.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310057|gb|ACF44757.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
Length = 1971
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 363 EYTASYEDLIQVI-------GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
EY ASY DL D + H+ +E R I FD++ YL S DL N
Sbjct: 17 EYFASYGDLRGWALLDGVLNAADSTNAAWHYNMHASAENRSIVFDAWEYLASNIDLMNWL 76
Query: 416 GSDRGA------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G+D AA+HYIT+G EGR+ F + Y+A++ DL + H
Sbjct: 77 GADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAANADLRDWLG--ATNYDAAAKH 134
Query: 470 FSNFGCEE 477
+ FG E
Sbjct: 135 YIQFGRAE 142
Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 482 TFDSYLYLGSYDDLRN-------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+ +S+ Y SY DLR + +D AA HY H E R+ F A EY+AS+
Sbjct: 12 SLESWEYFASYGDLRGWALLDGVLNAADSTNAAWHYNMHASAENRSI-VFDAWEYLASNI 70
Query: 535 DLINAFA----DAPDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSYDDLWNVFGS-DRS 588
DL+N D ++A + H+ G EGRS+ TF+ YL + DL + G+ +
Sbjct: 71 DLMNWLGADGITDADAIKAAQ-HYITNGAAEGRSMGTFDSAAYLAANADLRDWLGATNYD 129
Query: 589 AAAQHYITHGMKE 601
AAA+HYI G E
Sbjct: 130 AAAKHYIQFGRAE 142
Score = 84.4 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 436 NPDAFKALEYIASHEDL-----INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ ++ EY AS+ DL ++ +A D H++ E R + FD++ YL
Sbjct: 9 TTGSLESWEYFASYGDLRGWALLDGVLNAADSTNAAW-HYNMHASAENRSIVFDAWEYLA 67
Query: 491 SYDDLRNVFGSD------RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
S DL N G+D AA+HYIT+G EGR+ F + Y+A++ DL +
Sbjct: 68 SNIDLMNWLGADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAANADLRDWLGATN 127
Query: 545 DLVQAGKDHFSNFGYEE 561
A H+ FG E
Sbjct: 128 --YDAAAKHYIQFGRAE 142
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 520 NPDAFKALEYIASHEDL-----INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
+ ++ EY AS+ DL ++ +A D A H++ E RSI F+ YL
Sbjct: 9 TTGSLESWEYFASYGDLRGWALLDGVLNAADSTNAAW-HYNMHASAENRSIVFDAWEYLA 67
Query: 575 SYDDLWNVFGSDR------SAAAQHYITHGMKEGRALG-ISGMQFKSV 615
S DL N G+D AAQHYIT+G EGR++G + +
Sbjct: 68 SNIDLMNWLGADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAA 115
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 60/187 (32%), Gaps = 18/187 (9%)
Query: 202 LGNNIYKIEVQQKDSPFIQT-IYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ I S I + D G G D ++ +L ++L T S GG +
Sbjct: 1664 AADTINGGTGNDNISGLIGADVLDGGEGIDTVNYSL-SLAAVTVNLATNVVS--GGDAQG 1720
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---------YY 310
TI+ E+V GS+ +DV+ G+ A N +G+D G G D
Sbjct: 1721 DTISN---FENVTGSNYHDVLTGSDAANTLDGGAGHDTIYGGLGADLILAGEGQDVVDGG 1777
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
A + A V + D +S V ++L +
Sbjct: 1778 AGIDTINLTESGVAPSVQVKDTVSSDVISLVNADLITGFASGTDKFDYNGALLNGLGTNA 1837
Query: 370 DLIQVIG 376
D I
Sbjct: 1838 DGIAGTD 1844
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + ++L + +G + + ++A TV SV+G++ D + G + N+ G
Sbjct: 1626 TYAGQQTTMNL-STVPGDLGFVQPDPSVATETVARSVIGAA--DTINGGTGNDNISGLIG 1682
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
DV DG G+DT Y + N + DA D +S+ E + ++
Sbjct: 1683 ADVLDGGEGIDTVNYSLSLAAVTVNLATNVVSGGDAQG---DTISNFENVTGSNYHDVLT 1739
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVF 380
+ L+ A ++ + +G D+
Sbjct: 1740 GSDAANTLDGGAGHDTIYGGLGADLI 1765
Score = 38.2 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 38/120 (31%), Gaps = 2/120 (1%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S++ + N++ I G + ++ G ++ G D +G +G D
Sbjct: 1354 SAVLDTDANLS-TGGAAISVEYGDTATLLIHGTQNSDTIIGGRGTDTINGWAGNDIIVGD 1412
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++ A YDA + + + + +I Y + D
Sbjct: 1413 EVTNQPELEVVTFAAT-YDAGDVITVTHNGQSIIATIGTDGVNGAAVATAIAAYDGAGSD 1471
>gi|149925647|ref|ZP_01913911.1| Hemolysin-type calcium-binding region [Limnobacter sp. MED105]
gi|149825764|gb|EDM84972.1| Hemolysin-type calcium-binding region [Limnobacter sp. MED105]
Length = 785
Score = 95.2 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 456
FD Y ++ D+ + A H+ +G +GR F + Y + DL+
Sbjct: 663 VFDWDYYYDAHPDVVQ---INMDMAT-HWKDYGFYQGRAGSFEFDPVFYWNKYPDLVQIC 718
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFG-SDRGAAARHYITH 513
+ G H+ + G EGR F YL Y DL +G + G A H+IT
Sbjct: 719 GAGN--LHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYGPNGFGDALHHWITV 776
Query: 514 GVKEGRNP 521
G EGR+P
Sbjct: 777 GKDEGRDP 784
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLR 412
Y ++ D++Q+ + H+ ++G +GR FD Y Y DL
Sbjct: 660 AASVFDWDYYYDAHPDVVQI----NMDMATHWKDYGFYQGRAGSFEFDPVFYWNKYPDLV 715
Query: 413 NVFGS-DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ G+ + +H++++G+ EGR F + Y+ + DL+ A+ P+ H+
Sbjct: 716 QICGAGNLHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYG--PNGFGDALHHW 773
Query: 471 SNFGCEEGRFVT 482
G +EGR
Sbjct: 774 ITVGKDEGRDPR 785
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDL 495
F Y +H D++ D H+ ++G +GR FD Y Y DL
Sbjct: 662 SVFDWDYYYDAHPDVVQINMDMAT-------HWKDYGFYQGRAGSFEFDPVFYWNKYPDL 714
Query: 496 RNVFGS-DRGAAARHYITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G+ + +H++++G+ EGR +P+ F + Y+ + DL+ A+ P+
Sbjct: 715 VQICGAGNLHCGIQHWLSNGIGEGRMGSPN-FSVVNYLYKYPDLLQAYG--PNGFGDALH 771
Query: 553 HFSNFGYEEGRSIT 566
H+ G +EGR
Sbjct: 772 HWITVGKDEGRDPR 785
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y ++ D+ + A H+ +G +GR F + Y + DL+
Sbjct: 664 FDWDYYYDAHPDVVQINMD----MATHWKDYGFYQGRAGSFEFDPVFYWNKYPDLVQICG 719
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFG-SDRSAAAQHYITHG 598
+ G H+ + G EGR S F+ YL Y DL +G + A H+IT G
Sbjct: 720 AGN--LHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYGPNGFGDALHHWITVG 777
Query: 599 MKEGR 603
EGR
Sbjct: 778 KDEGR 782
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F Y +H D++ D H+ ++G+ +GR S F+P Y Y DL
Sbjct: 664 FDWDYYYDAHPDVVQINMDM-------ATHWKDYGFYQGRAGSFEFDPVFYWNKYPDLVQ 716
Query: 582 VFGSDRS-AAAQHYITHGMKEGRALGIS 608
+ G+ QH++++G+ EGR +
Sbjct: 717 ICGAGNLHCGIQHWLSNGIGEGRMGSPN 744
>gi|315499282|ref|YP_004088086.1| glycosyl transferase family 2 [Asticcacaulis excentricus CB 48]
gi|315417294|gb|ADU13935.1| glycosyl transferase family 2 [Asticcacaulis excentricus CB 48]
Length = 1138
Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/292 (18%), Positives = 94/292 (32%), Gaps = 37/292 (12%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
I Q Y + + H+ G + F++++YL
Sbjct: 153 GVIALRASGQFDERYYKSQLN-----FSTRNSNLLWHYVVNGAENQLNPNSAFNTHVYLH 207
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE------DLINAFADAP 460
+Y D+ G + HYI G EGR+ +I+ D A
Sbjct: 208 NYPDVLRA-GIN---PFVHYIQSGRFEGRSSAPLLDDAFISIQPLHAETRDAAQAVTQPS 263
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG---SDRGAAARHYITHGVKE 517
+ +V D E + L G +D + R I +G+K
Sbjct: 264 ESTEVQTD-----ASNEEPQLETLPQTALSEPLSNEASKGTLINDIHWSVRTAIKYGIK- 317
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL------ 571
R D +++++ I + AF ++ H EG F+P
Sbjct: 318 -RAVDGYRSVQVIRRQGNFNQAFYAEQVGLRLRPKHHVWHYVIEGSRCGFDPSPNFSAEK 376
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
YLT YDD+ + HY+ G++E R + S F ++ ++
Sbjct: 377 YLTFYDDVK----ASGREPYAHYLKFGIRENRTIVPSQSPFAENHSIPQEKG 424
>gi|254502450|ref|ZP_05114601.1| hypothetical protein SADFL11_2489 [Labrenzia alexandrii DFL-11]
gi|222438521|gb|EEE45200.1| hypothetical protein SADFL11_2489 [Labrenzia alexandrii DFL-11]
Length = 432
Score = 94.0 bits (232), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 64/190 (33%), Gaps = 13/190 (6%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
+Q Y + T + R AL E++K +++ F E + D
Sbjct: 100 EQVTFTYRFETSKAADFPWTNVGNTTGFTEAEKSAIRSALQEYNKHININFVEDNSSQDA 159
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL-------SHNALHEIGHAL 132
+ T + D W LHEIGH L
Sbjct: 160 VLSFYKADDLYTDLSVTGGGRGRGSYSGDDWDGAAVFNANRDLSSQSEFDLVLHEIGHTL 219
Query: 133 GLMHPGSYN-GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
GL HPG Y+ GG G + D+ +VMSY + ++ DI+A+
Sbjct: 220 GLKHPGDYDRGGNNPAGPFLPADEDNERWTVMSYNPDPSTDIEPDR-----LKFYDIMAL 274
Query: 192 QKIYGAPKGS 201
Q+ +G G+
Sbjct: 275 QQFWGTNNGN 284
>gi|83582767|ref|YP_425073.1| hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
gi|83578083|gb|ABC24633.1| Hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
Length = 830
Score = 94.0 bits (232), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLI 453
+ F++ YL +Y D+ + A+A HY G KE RNP++ F A Y A + D++
Sbjct: 2 SLAFNATYYLTAYPDVAKAVSLGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVL 61
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT-----FDSYLYLGSYDDLRNVFGSDRGA-AA 507
NA ++ HF +G E R + F+ YL + D+ + A
Sbjct: 62 NAVSNGA--FPSVWAHFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAVTAGSMPSAL 119
Query: 508 RHYITHGVKEGRN 520
H++ GV EGR+
Sbjct: 120 YHFLAFGVDEGRS 132
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDA-FKALEYIASHEDLI 537
+ F++ YL +Y D+ + A+A HY G KE RNP++ F A Y A + D++
Sbjct: 2 SLAFNATYYLTAYPDVAKAVSLGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVL 61
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT-----FNPDLYLTSYDDLWNVF-GSDRSAAA 591
NA ++ + HF +G E R+ + FN YL + D+ +A
Sbjct: 62 NAVSNG--AFPSVWAHFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAVTAGSMPSAL 119
Query: 592 QHYITHGMKEGRALG 606
H++ G+ EGR+
Sbjct: 120 YHFLAFGVDEGRSGS 134
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y +Y D+ + + F S H+ FG E R+ FD+ Y D+ N
Sbjct: 4 AFNATYYLTAYPDVAKAVSLGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVLNA 63
Query: 415 FGSDRGAAA-RHYITHGVKEGRNPD----AFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + H++ +G E R P AF Y+A++ D+ A + H
Sbjct: 64 VSNGAFPSVWAHFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAV--TAGSMPSALYH 121
Query: 470 FSNFGCEEGRF 480
F FG +EGR
Sbjct: 122 FLAFGVDEGRS 132
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLR 496
AF A Y+ ++ D+ A + + H++ FG +E R FD+ Y D+
Sbjct: 4 AFNATYYLTAYPDVAKAVSLGQ--FASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVL 61
Query: 497 NVFGSDRGAAAR-HYITHGVKEGRNPD----AFKALEYIASHEDLINAFADAPDLVQAGK 551
N + + H++ +G E R P AF Y+A++ D+ A + +
Sbjct: 62 NAVSNGAFPSVWAHFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAVTAG--SMPSAL 119
Query: 552 DHFSNFGYEEGRS 564
HF FG +EGRS
Sbjct: 120 YHFLAFGVDEGRS 132
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF A Y+ ++ D+ A + + + H++ FG +E R+ F+ + Y D+
Sbjct: 4 AFNATYYLTAYPDVAKAVSLGQ--FASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVL 61
Query: 581 NVFGSDRSAAA-QHYITHGMKEGRALGISGMQFKSVMNLSEK 621
N + + H++ +G E RA + F L+
Sbjct: 62 NAVSNGAFPSVWAHFLAYGAAEERAPSTALAAFNETSYLAAN 103
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY- 310
S +++ T +++ G++ D++ + N+ +G D D +G DT +
Sbjct: 616 SAATGANGLSVTSGTGNDTITGTANADIIRVGAGNDTVTAGAGIDRIDLGAGNDTVVFGE 675
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + + A+E K D V + +AS D
Sbjct: 676 AFAAGNANHDVVTGFTFGAASEDKYDIGFTVANGTTNATANLAALAPVAVADNGSASAND 735
Query: 371 LI 372
+I
Sbjct: 736 VI 737
>gi|226946643|ref|YP_002801716.1| serine peptidase [Azotobacter vinelandii DJ]
gi|226721570|gb|ACO80741.1| serine peptidase [Azotobacter vinelandii DJ]
Length = 659
Score = 94.0 bits (232), Expect = 8e-17, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 7/157 (4%)
Query: 195 YGAPKGSLGNNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
YG+ G+ Y ++ S + D G+D +D + L
Sbjct: 504 YGSAPGNADVYHYTEEILAVQALSGQSGRSTLVDDDAGNDWID-AAAAIRDLSLSLVAGQ 562
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S++GG +TIA T+IE+ +G GND + GN A+N+ + G+D G +G DT +
Sbjct: 563 TSTLGGIPF-LTIAPGTLIENAIGGDGNDRIEGNEADNLIYGMRGDDTLIGGAGNDTAVF 621
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ Y + I V + + D L+ E F
Sbjct: 622 LGRAEDYSVSEAGGVITVQNLSGGGTDTLTGFEGWLF 658
>gi|317047360|ref|YP_004115008.1| family 2 glycosyl transferase [Pantoea sp. At-9b]
gi|316948977|gb|ADU68452.1| glycosyl transferase family 2 [Pantoea sp. At-9b]
Length = 1419
Score = 94.0 bits (232), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 33/152 (21%)
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD----------A 439
E + D YL +Y D+ HY+ +G EGR P
Sbjct: 423 AAPEATHVEVDREWYLQTYPDVS----GSGVEPEEHYLNYGKAEGRYPTQNAFLQSEAPD 478
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--------FDSYLYLGS 491
F A Y+ ++ D+ A H+ G +EGRF + D YL +
Sbjct: 479 FDAQWYLDTYTDVARA-------QIPAVYHYITHGQQEGRFSSLARLVAQDLDIPWYLEA 531
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
Y D+ G D H++ +G EGR P A
Sbjct: 532 YPDVATS-GMD---PFEHFLLYGHAEGRQPSA 559
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 30/151 (19%)
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-----------FDSYLYL 489
Y+ ++ D+ + + +H+ N+G EGR+ T FD+ YL
Sbjct: 433 DREWYLQTYPDVSGSGVEPE-------EHYLNYGKAEGRYPTQNAFLQSEAPDFDAQWYL 485
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA-PDLVQ 548
+Y D+ + A HYITHG +EGR F +L + + + I + +A PD+
Sbjct: 486 DTYTDVARA----QIPAVYHYITHGQQEGR----FSSLARLVAQDLDIPWYLEAYPDVAT 537
Query: 549 AGKD---HFSNFGYEEGRSITFNPDLYLTSY 576
+G D HF +G+ EGR + P + +
Sbjct: 538 SGMDPFEHFLLYGHAEGRQPSATPRMLEAPF 568
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 33/140 (23%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----------FDSYLYLGSYDDLR 412
Y +Y D+ E +H+ +G +EGR T FD+ YL +Y D+
Sbjct: 437 YLQTYPDVSG----SGVEPEEHYLNYGKAEGRYPTQNAFLQSEAPDFDAQWYLDTYTDVA 492
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPD-------AFKALEYIASHEDLINAFADAPDLVQV 465
+ A HYITHG +EGR Y+ ++ D+ + D
Sbjct: 493 RA----QIPAVYHYITHGQQEGRFSSLARLVAQDLDIPWYLEAYPDVATSGMDP------ 542
Query: 466 GKDHFSNFGCEEGRFVTFDS 485
+HF +G EGR +
Sbjct: 543 -FEHFLLYGHAEGRQPSATP 561
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 33/158 (20%)
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA----------FKA 526
E V D YL +Y D+ HY+ +G EGR P F A
Sbjct: 426 EATHVEVDREWYLQTYPDV----SGSGVEPEEHYLNYGKAEGRYPTQNAFLQSEAPDFDA 481
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--------SITFNPDLYLTSYDD 578
Y+ ++ D+ A H+ G +EGR + + YL +Y D
Sbjct: 482 QWYLDTYTDVARAQIP-------AVYHYITHGQQEGRFSSLARLVAQDLDIPWYLEAYPD 534
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
+ +H++ +G EGR + ++
Sbjct: 535 VATSGMD----PFEHFLLYGHAEGRQPSATPRMLEAPF 568
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 16/99 (16%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--------DITFD 400
Y +Y D+ + ++ H+ G EGR D
Sbjct: 469 NAFLQSEAPDFDAQWYLDTYTDVARA----QIPAVYHYITHGQQEGRFSSLARLVAQDLD 524
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
YL +Y D+ + H++ +G EGR P A
Sbjct: 525 IPWYLEAYPDV----ATSGMDPFEHFLLYGHAEGRQPSA 559
>gi|158337389|ref|YP_001518564.1| type I secretion target repeat-containing protein [Acaryochloris
marina MBIC11017]
gi|158307630|gb|ABW29247.1| type I secretion target repeat protein [Acaryochloris marina
MBIC11017]
Length = 580
Score = 93.6 bits (231), Expect = 8e-17, Method: Composition-based stats.
Identities = 69/381 (18%), Positives = 109/381 (28%), Gaps = 59/381 (15%)
Query: 23 WSNYFIRYKPDVLTTHR-LSFDITEL-NPNAQEVARWALGEWSKVVDLTFEETSIHSD-- 78
W+ +T SF + L N A+ + R ALG W+K L F+E +
Sbjct: 133 WNQPGGSGNAVNITYSFAPSFQLNGLSNNEARSLFREALGVWAKYAPLNFQEVQDPGNGS 192
Query: 79 -------IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+FI +G + + + +D + W G+ A+HE GH+
Sbjct: 193 DVDIRVGAEFIDGRSGTLAFAFFPRGG--DQTYDTGETWNAGL-----FLETAVHETGHS 245
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL H GVD +M S A + DI V
Sbjct: 246 LGLGH---------ESGVDA----------IM----NPSIQRRFSGAGTAFLLQDDINGV 282
Query: 192 QKIYGAPKGS--------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+YG+ GS +P T
Sbjct: 283 HSLYGSGTGSVSPLSPSPTPVPAPAPAPAPAPAPAPAPAPVPTPTPTPTPTPTPTPTPTP 342
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ S + I + + G S NDV+ G N++ GND G SG
Sbjct: 343 SPSPTPTPSPSPTPGDNRIDGTNRNDVLRGGSRNDVIRGFGGNDLISGRRGNDRLFGGSG 402
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D F + + + + D + N +L
Sbjct: 403 NDRMFGGSGND----VMSGDGGSDRMSGGSGND-----RMFGGSGNDRIDGNSGN-DVLN 452
Query: 364 YTASYEDLIQVIGQDVFESMK 384
+ + L G+D +
Sbjct: 453 GGSGNDSLFGGNGRDRLIGVN 473
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 22/182 (12%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG+DL+ G + L S + + G N ++ + + G SGND + G S
Sbjct: 383 GGNDLI-----SGRRGNDRLFGGSGNDRMFGGSGNDVMSGDGGSDRMSGGSGNDRMFGGS 437
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSY---LYKIYRFENAIIVYDANEHKQD----F 337
N+ +SGNDV +G SG D+ F I + + D +D
Sbjct: 438 GNDRIDGNSGNDVLNGGSGNDSLFGGNGRDRLIGVNISDAKPGVGEIDFLRGGRDADVFV 497
Query: 338 LSDVERLRFADQCIDSVNV-------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L D +++ +AD S Q +L+ S D +G YE G
Sbjct: 498 LGDSQKVYYADGPATSNYAVVQDFTPNQGDVLQLNGSASD--YSLGVSQPSGTALIYEGG 555
Query: 391 LS 392
S
Sbjct: 556 SS 557
>gi|119493876|ref|ZP_01624441.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119452388|gb|EAW33579.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 358
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 13/211 (6%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE---EGRFVTFDSYLYLGSY 492
N D F Y+ + L A ++Q G DHF FG + G +D YL +
Sbjct: 2 NFDIFDEQYYLQQYPYLQPAIEQG--IIQSGLDHFQRFGLQLGLTGVSRYYDEAYYLENN 59
Query: 493 DDLRNVFGSDRGA-AARHYITHGVKEGRNPDA--FKALEYIASHEDLINAFADAPDLVQA 549
D+ F R H+I G +EGRN + Y+ ++ LI+ ++
Sbjct: 60 PDVAEAFNDRRFPSGLSHFIVFGYEEGRNNTTSDYDETFYLNNNSYLISQIETGT--YKS 117
Query: 550 GKDHFSNFGYEEG-RSITFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGRALGI 607
G HF G ++G ++ +F YL D+ + + HY +G EGR+
Sbjct: 118 GFSHFIKVGRQQGLQATSFTNPEYLQRNPDIVDAINNGVLPTGQTHYREYGQFEGRSTMF 177
Query: 608 SGMQFKSVMNLSEKSRDKADLSLSFDHKKVD 638
+G V+ + +K +S D+ +
Sbjct: 178 TGTPSSDVIA-TYGEGEKTIYGVSVDYPSIG 207
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 11/176 (6%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT---FDSYLYLGSYDD 410
N Y Y L I Q + + + HF FGL G +D YL + D
Sbjct: 2 NFDIFDEQYYLQQYPYLQPAIEQGIIQSGLDHFQRFGLQLGLTGVSRYYDEAYYLENNPD 61
Query: 411 LRNVFGSDR-GAAARHYITHGVKEGRN--PDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ F R + H+I G +EGRN + Y+ ++ LI+ + G
Sbjct: 62 VAEAFNDRRFPSGLSHFIVFGYEEGRNNTTSDYDETFYLNNNSYLISQIETG--TYKSGF 119
Query: 468 DHFSNFGCEEG-RFVTFDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNP 521
HF G ++G + +F + YL D+ + + + HY +G EGR+
Sbjct: 120 SHFIKVGRQQGLQATSFTNPEYLQRNPDIVDAINNGVLPTGQTHYREYGQFEGRST 175
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 8/151 (5%)
Query: 339 SDVERL-RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRD 396
S ++ RF Q + + Y + D+ + F + HF FG EGR+
Sbjct: 29 SGLDHFQRFGLQLGLTGVSRYYDEAYYLENNPDVAEAFNDRRFPSGLSHFIVFGYEEGRN 88
Query: 397 IT---FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
T +D YL + L + + + H+I G ++G +F EY+ + D+
Sbjct: 89 NTTSDYDETFYLNNNSYLISQIETGTYKSGFSHFIKVGRQQGLQATSFTNPEYLQRNPDI 148
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
++A ++ G+ H+ +G EGR F
Sbjct: 149 VDAI--NNGVLPTGQTHYREYGQFEGRSTMF 177
>gi|46241633|gb|AAS83018.1| hypothetical protein pRhico010 [Azospirillum brasilense]
Length = 1380
Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 68/366 (18%), Positives = 107/366 (29%), Gaps = 56/366 (15%)
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE---------RLRFADQCIDSVNVKQRSILE 363
+ I + N VY NE+K D + VE ++
Sbjct: 12 NENDVILVYNNIDYVYFINEYK-DLVMGVEPLNKETVLNLYIAGNRTSSLDPSHAFDEDA 70
Query: 364 YTASYEDLIQVIGQDV-FESMKHFYEFGLSEGRD------------------ITFDSYLY 404
Y D+ + + H+ +G +EGR F
Sbjct: 71 YRKHNPDVREAVESGAYISGFHHWLRYGKAEGRHGWKKEQPAVSEQPVVPAPEEFQEPRL 130
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ D + +A + RN F A Y++++ +L + L
Sbjct: 131 MEVSTDAAPQEVENSVDSA---LLSEASIIRNSGLFDASWYLSTYHELGLTSEEDALLDF 187
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
+ + F + YL D+ G+ HY+ G +EGR P
Sbjct: 188 ASR----GWRAMRNPNADFSTRYYLEQNRDV----GAADLNPLVHYVAAGDREGRQPSPL 239
Query: 525 -KALEYIASHEDLINAFADAPDLVQAGKDHFSNF--GYEEGRSITFNPDLYLTSYDDLWN 581
Y H +A Q H+ + F+PD YL SY D+
Sbjct: 240 LDVAWYRKVHGIDADA--------QTCLAHYRAHKQDRRVSPTPYFDPDFYLDSYPDVA- 290
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGIS-GMQFKSVMNLSEKSRDKADLSLSFDHKKVDLY 640
+ +HY+ G +EGR F V+ LS L K L
Sbjct: 291 ---QSDAHPFEHYMNWGHREGRNPSADFQTTFYRVLYLSASPESNPLLHFLETGKAAGLR 347
Query: 641 TDYFGD 646
T GD
Sbjct: 348 TTPGGD 353
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/318 (18%), Positives = 101/318 (31%), Gaps = 51/318 (16%)
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR--FADQCIDSVNVKQRSIL 362
D +Y + + + E+A++ + + + + + + +Q D ++
Sbjct: 164 DASWYLSTYHELGLTSEEDALLDFASRGWRAMRNPNADFSTRYYLEQNRDVGAADLNPLV 223
Query: 363 EYTASYE----------DLIQ-----VIGQDVFESMKHFYEFGLSEGR----DITFDSYL 403
Y A+ + D+ I D + H+ + R FD
Sbjct: 224 HYVAAGDREGRQPSPLLDVAWYRKVHGIDADAQTCLAHYRAH--KQDRRVSPTPYFDPDF 281
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDL 462
YL SY D+ HY+ G +EGRNP A F+ Y + L + P L
Sbjct: 282 YLDSYPDVAQSDAH----PFEHYMNWGHREGRNPSADFQTTFYRVLY--LSASPESNPLL 335
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
HF G G T + L D R G A + +H GR
Sbjct: 336 ------HFLETGKAAGLRTTPGGDI-LDPAVDKRRFVA--PGDAFEEFESHAELAGRE-- 384
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR-------SITFNPDLYLTS 575
++ IA + +AF + + G ++N R I + Y +
Sbjct: 385 ---RVKAIAFYLPQFHAFPENDEWWGTGFTEWTNIAKAMPRFSGHYQPRIPRDLGFYDLN 441
Query: 576 YDDLWNVFGSDRSAAAQH 593
D + A H
Sbjct: 442 NDGVLERQVEMARQAGLH 459
>gi|67926068|ref|ZP_00519320.1| Peptidase M10A and M12B, matrixin and adamalysin [Crocosphaera
watsonii WH 8501]
gi|67852088|gb|EAM47595.1| Peptidase M10A and M12B, matrixin and adamalysin [Crocosphaera
watsonii WH 8501]
Length = 284
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 69/186 (37%), Gaps = 28/186 (15%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-----SIHSDIKFISSNN---G 87
+ + + E++ + R + V+D+ F E S I+ +SNN
Sbjct: 94 SYYGSESGVQEVSEGIKSNFRKIVAWLENVIDIDFVEVDETDPSTFGQIRVQNSNNPGYA 153
Query: 88 YVCTPRYDSRY----FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
Y P + SR F D + G +HE+GHALGL H S
Sbjct: 154 YAYYPGFTSRSGDIHFKTGYDRLGDTNGFQHDAGKHGYMTIVHELGHALGLAHTFS---- 209
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
G D D+ SVM+Y + + T M D+ A+Q +YGA + G
Sbjct: 210 ----GTVLDPGLDNTDNSVMTY--------NFTGHSAGTFMALDVAALQSLYGAKTHNNG 257
Query: 204 NNIYKI 209
N Y
Sbjct: 258 NTTYTF 263
>gi|251825696|gb|ACT20898.1| protease [Microbacterium sp. SRC-008]
gi|251825706|gb|ACT20903.1| protease [Bacillus sp. SRC-007]
Length = 125
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 14/122 (11%)
Query: 56 RWALGEWSKVVDLTFEETSIH--SDIKFIS-----SNNGYVCTPRYD----SRYFMEINF 104
+ +L W+ V ++ F + D+ F + + P + + IN
Sbjct: 6 QLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINS 65
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVM 163
+ G HEIGH LGL HPG YN G D Y D+ S M
Sbjct: 66 SYS--ANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSGM 123
Query: 164 SY 165
SY
Sbjct: 124 SY 125
>gi|99077980|ref|YP_611239.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Ruegeria sp.
TM1040]
gi|99034923|gb|ABF61977.1| peptidase S8 and S53 subtilisin kexin sedolisin [Ruegeria sp.
TM1040]
Length = 862
Score = 92.1 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 91/231 (39%), Gaps = 24/231 (10%)
Query: 195 YGAPKGSLGNNIY----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
YG+ + N+ Y + S D+ G D ++ + + ++L+ +
Sbjct: 503 YGS--VASDNDTYIFTDEFSDYAGRSSHNTAFDDAAGLDTINAAAVS-AASTLNLSEGT- 558
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G ++I + IESV GND + G++ NNVF GND +G G+D
Sbjct: 559 ----GNIDGVSITF-SGIESVYTGDGNDNLTGDAGNNVFQAGRGNDTINGGDGIDQAVVL 613
Query: 311 APSYLYKIYRFENA--IIVYDANEHKQDFLSDVERLRFADQCIDSV---NVKQRSILEYT 365
A + Y + +N + +D L+D+E ++FAD +D + ++ ++
Sbjct: 614 ANQFNYSVAINKNGAVTVTDRNASEGEDGLTDIEMIKFADATLDLTQFVSTASLTVDQFE 673
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------FDSYLYLGSYDD 410
E + + +F+ L+EG + FD Y D
Sbjct: 674 PLAEMYAAYFNRAPDATGLYFWADKLAEGLSLNQIAELFFDQAETRALYTD 724
>gi|302671134|ref|YP_003831094.1| hypothetical protein bpr_I1776 [Butyrivibrio proteoclasticus B316]
gi|302395607|gb|ADL34512.1| hypothetical protein bpr_I1776 [Butyrivibrio proteoclasticus B316]
Length = 677
Score = 92.1 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D+ G+ A ARHY G++EGRN A D+ AF +
Sbjct: 52 QNPDVVKAVGNSYEALARHYDLFGMREGRN----------AYSGDVKAAFIRLAN----- 96
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFK 525
S + G FD+ Y D VFG+D H+I +G+ EGR P + F
Sbjct: 97 ----SQYKLGRGIASVFDAKWYAAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRTPSETFN 152
Query: 526 ALEYIASHED----LINAFADAPDLVQA 549
A + + +++ + AFAD P++V +
Sbjct: 153 ADTFFSENKEMAVLVAAAFADKPEVVNS 180
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 26/148 (17%)
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D+ G+ A ARHY G++EGRN A D+ AF
Sbjct: 52 QNPDVVKAVGNSYEALARHYDLFGMREGRN----------AYSGDVKAAFIR-------- 93
Query: 551 KDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
+N Y+ GR I F+ Y D VFG+D + +H+I +G+ EGR
Sbjct: 94 ---LANSQYKLGRGIASVFDAKWYAAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRT---P 147
Query: 609 GMQFKSVMNLSEKSRDKADLSLSFDHKK 636
F + SE ++ +F K
Sbjct: 148 SETFNADTFFSENKEMAVLVAAAFADKP 175
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 30/129 (23%)
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-------------------------TFDS 401
D+++ +G +H+ FG+ EGR+ FD+
Sbjct: 52 QNPDVVKAVGNSYEALARHYDLFGMREGRNAYSGDVKAAFIRLANSQYKLGRGIASVFDA 111
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED----LINAF 456
Y D VFG+D H+I +G+ EGR P F A + + +++ + AF
Sbjct: 112 KWYAAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRTPSETFNADTFFSENKEMAVLVAAAF 171
Query: 457 ADAPDLVQV 465
AD P++V
Sbjct: 172 ADKPEVVNS 180
>gi|134093314|ref|YP_001098389.1| putative Jacalin-related lectin family protein [Herminiimonas
arsenicoxydans]
gi|133737217|emb|CAL60260.1| conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 949
Score = 91.7 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y D+ + H+ +G EGR F A Y + D+ A
Sbjct: 680 VFDWDYYYDKNPDVVAA----KVDLPTHWKDNGFNEGRQGSPEFSASYYWNRYTDVQAAC 735
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSY--LYLGSYDDLRNVFGSD-RGAAARHYITH 513
+Q H+ + G E GR + D YL Y DL+N FG D A H++
Sbjct: 736 PTPSTKLQCALQHWLDDGFELGRQGSADVSIVSYLNRYPDLQNAFGVDNYDDAFDHWMNS 795
Query: 514 GVKEGRNPDA 523
G EGRN
Sbjct: 796 GEDEGRNARP 805
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 8/130 (6%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y D+ + H+ +G EGR F A Y + D+ A
Sbjct: 681 FDWDYYYDKNPDVVAA----KVDLPTHWKDNGFNEGRQGSPEFSASYYWNRYTDVQAACP 736
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPD--LYLTSYDDLWNVFGSDR-SAAAQHYITHG 598
+Q H+ + G+E GR + + YL Y DL N FG D A H++ G
Sbjct: 737 TPSTKLQCALQHWLDDGFELGRQGSADVSIVSYLNRYPDLQNAFGVDNYDDAFDHWMNSG 796
Query: 599 MKEGRALGIS 608
EGR
Sbjct: 797 EDEGRNARPD 806
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 15/140 (10%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDL 495
F Y + D++ A D P H+ + G EGR F + Y Y D+
Sbjct: 679 SVFDWDYYYDKNPDVVAAKVDLPT-------HWKDNGFNEGRQGSPEFSASYYWNRYTDV 731
Query: 496 RNVF---GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGK 551
+ + A +H++ G + GR A + Y+ + DL NAF D
Sbjct: 732 QAACPTPSTKLQCALQHWLDDGFELGRQGSADVSIVSYLNRYPDLQNAFG--VDNYDDAF 789
Query: 552 DHFSNFGYEEGRSITFNPDL 571
DH+ N G +EGR+ +
Sbjct: 790 DHWMNSGEDEGRNARPDTSF 809
>gi|323139303|ref|ZP_08074356.1| hypothetical protein Met49242DRAFT_3744 [Methylocystis sp. ATCC
49242]
gi|322395451|gb|EFX97999.1| hypothetical protein Met49242DRAFT_3744 [Methylocystis sp. ATCC
49242]
Length = 746
Score = 91.7 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 80/220 (36%), Gaps = 36/220 (16%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
+ F+ Y +Y ++R G D HY+ G G NP+ F + Y+ + D+
Sbjct: 129 NPLFNEPWYFSTYPEIRE-LGLD---PYFHYLRIGGFSGYNPNPLFDSAWYLREYADVRA 184
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ + +H+ G EGR + FG D G Y ++
Sbjct: 185 SLINP-------LEHYYLSGVTEGRDPSPS--------------FGDDPGIPDFFYNSYH 223
Query: 515 VKEGR-NPDAFKALEYIASHED---LINAFADAPDLVQAGK---DHFSNFGYEEGRSIT- 566
R + D L I D I + +AP+ + H+ G G S
Sbjct: 224 RLLSRPDIDPACPLGIIRKEFDKQFYIARYLNAPENRKWRAWPFLHYFYIGARHGYSPND 283
Query: 567 -FNPDLYLTSYDDLWNVFG-SDRSAAAQHYITHGMKEGRA 604
F+ + Y+ Y D+ + + HY+ G KEGR+
Sbjct: 284 SFSEEFYVNLYKDVREAIARKEIRSGFWHYLATGKKEGRS 323
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 78/219 (35%), Gaps = 46/219 (21%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y ++Y ++ ++ + H+ G G + FDS YL Y D+R +
Sbjct: 137 YFSTYPEIREL----GLDPYFHYLRIGGFSGYNPNPLFDSAWYLREYADVR----ASLIN 188
Query: 422 AARHYITHGVKEGRNPDA----------FKALEY--IASHEDLINAFADAPDLVQVGKDH 469
HY GV EGR+P F Y + S D+ A +
Sbjct: 189 PLEHYYLSGVTEGRDPSPSFGDDPGIPDFFYNSYHRLLSRPDIDPACPLGIIRKE----- 243
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPD-AFKAL 527
FD Y+ Y L A HY G + G +P+ +F
Sbjct: 244 -------------FDKQFYIARY--LNAPENRKWRAWPFLHYFYIGARHGYSPNDSFSEE 288
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
Y+ ++D+ A A +++G H+ G +EGRS
Sbjct: 289 FYVNLYKDVREAIARKE--IRSGFWHYLATGKKEGRSCR 325
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 54/166 (32%), Gaps = 46/166 (27%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------------------------- 398
Y Y D+ + ++H+Y G++EGRD +
Sbjct: 175 YLREYADVRASL----INPLEHYYLSGVTEGRDPSPSFGDDPGIPDFFYNSYHRLLSRPD 230
Query: 399 -------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALE 444
FD Y+ Y + R HY G + G +P+ +F
Sbjct: 231 IDPACPLGIIRKEFDKQFYIARYLN-APENRKWRAWPFLHYFYIGARHGYSPNDSFSEEF 289
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
Y+ ++D+ A A ++ G H+ G +EGR L
Sbjct: 290 YVNLYKDVREAIAR--KEIRSGFWHYLATGKKEGRSCRHKLSEALE 333
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 14/97 (14%)
Query: 515 VKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDL 571
++ ++ + F Y +++ ++ D H+ G G + F+
Sbjct: 122 RRQRKSVNPLFNEPWYFSTYPEIRELGLDP-------YFHYLRIGGFSGYNPNPLFDSAW 174
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
YL Y D+ + +HY G+ EGR S
Sbjct: 175 YLREYADVR----ASLINPLEHYYLSGVTEGRDPSPS 207
>gi|194214001|ref|XP_001490302.2| PREDICTED: matrix metallopeptidase 11 (stromelysin 3) [Equus
caballus]
Length = 472
Score = 91.3 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 69/207 (33%), Gaps = 49/207 (23%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + +L W + Y+ + + ++ AL WS+V
Sbjct: 73 PSARNRQ-KRFVLSGGRWEKTELTYRILRFPWQLVREQV-------RQTVAEALQVWSEV 124
Query: 66 VDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWR 111
LTF E H+DI + + +D + +++FD + W
Sbjct: 125 TPLTFTEVHEGHADITIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWT 184
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G +GT L A HE GH LGL H + ++MS F
Sbjct: 185 IGDNQGTDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSPF----- 220
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAP 198
+F Y + D +Q +YG P
Sbjct: 221 ---YTFRYPLSLSPDDRRGIQHLYGRP 244
>gi|330975557|gb|EGH75623.1| putative DMSO reductase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 286
Score = 91.3 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 41/239 (17%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSY 492
RN + Y ++H DL N D H+ N+G +G+ F +YL +Y
Sbjct: 59 RNSAFYDEAWYRSNHRDLKNLDIDFAL-------HYFNYGWRQGKSPSFGFSGDMYLAAY 111
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR-----------NPDAFKALEYIASHEDLINAFA 541
D++ + HY T+G KE R N F Y +H
Sbjct: 112 PDVKTI----DMNPLLHYETYGKKEKRYVIPYAVEAIYNSTYFDDAYYQKNHN------G 161
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
+ + + D+ + S F+ D YL SY D+ D H+ HG KE
Sbjct: 162 KSTSRLASALDYITCKDNLRNPSEHFDADAYLESYPDVKE----DGVMPLLHFELHGKKE 217
Query: 602 GRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
R G+S K + + ++S K+V L+ Y GDG D ++ + +
Sbjct: 218 NRTAGLSNPLAKFLTYENN-------SNISHATKRVCLFACYMGDGAIPDETIFLLEKV 269
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 76/218 (34%), Gaps = 43/218 (19%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
N+ D L + F D+ Y +++ DL + + H++ +G
Sbjct: 48 NDADMDALEKIRNSAFYDEAW------------YRSNHRDLKNL----DIDFALHYFNYG 91
Query: 391 LSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-----------NP 437
+G+ + F +YL +Y D++ + HY T+G KE R N
Sbjct: 92 WRQGKSPSFGFSGDMYLAAYPDVKTI----DMNPLLHYETYGKKEKRYVIPYAVEAIYNS 147
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
F Y +H + + D+ + FD+ YL SY D++
Sbjct: 148 TYFDDAYYQKNHN------GKSTSRLASALDYITCKDNLRNPSEHFDADAYLESYPDVKE 201
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
D H+ HG KE R L ++E+
Sbjct: 202 ----DGVMPLLHFELHGKKENRTAGLSNPLAKFLTYEN 235
>gi|73995874|ref|XP_543534.2| PREDICTED: similar to matrix metalloproteinase 11 preproprotein
[Canis familiaris]
Length = 489
Score = 91.3 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 67/198 (33%), Gaps = 48/198 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 100 VLSGGRWDKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEG 152
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 153 RADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNQGTDLLQ 212
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 213 VAAHEFGHTLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 245
Query: 183 PMVSDIVAVQKIYGAPKG 200
D +Q +YG P+
Sbjct: 246 LSPDDRRGIQHLYGQPRT 263
>gi|321471531|gb|EFX82503.1| hypothetical protein DAPPUDRAFT_316218 [Daphnia pulex]
Length = 550
Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 70/201 (34%), Gaps = 51/201 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
++ +W + YK T D+ +E+AR A W+ V DL F + S
Sbjct: 159 IQGSHWPKKQLTYKIKKYTPDMSPSDV------DREIAR-AFQMWADVTDLAFVHVNNQS 211
Query: 78 -----DIKFISSNNG----------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI F + +G Y + +FD+ + W KGT L
Sbjct: 212 ADVDIDILFATGEHGSCPSFNDGPGGTLAHATYPIYGGDAHFDEGETWTLDSVKGTNLFQ 271
Query: 123 NALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H YP YG D++ D
Sbjct: 272 VATHEFGHSLGLEHTHVTTAVMYPFYGYSPDFKLD------------------------- 306
Query: 182 TPMVSDIVAVQKIYGAPKGSL 202
DI +Q++YG + S
Sbjct: 307 ---KDDIEGIQELYGKNQFSR 324
>gi|257058814|ref|YP_003136702.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
gi|256588980|gb|ACU99866.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
Length = 1152
Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 18/137 (13%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
Y D+ + + H+ + G S+G+D FD+ YL
Sbjct: 442 AQIISKSGLFDTGYYWQQNPDVK----LSNVDPLGHYLDIGASQGKDPNPLFDTSFYLEQ 497
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
Y ++ G + HYI G K+G P F Y+ + D++ P L
Sbjct: 498 YPEVTQ-LGMN---PLAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVE-LGINPLL---- 548
Query: 467 KDHFSNFGCEEGRFVTF 483
H+ G EE R
Sbjct: 549 --HYLTIGLEENRHPFP 563
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 18/126 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y D++ HY+ G +G++P+ F Y+ + ++
Sbjct: 451 FDTGYYWQQNPDVK----LSNVDPLGHYLDIGASQGKDPNPLFDTSFYLEQYPEVTQLGM 506
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ G ++G FD+ YL Y D+ + HY+T G+
Sbjct: 507 NP-------LAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVELG----INPLLHYLTIGL 555
Query: 516 KEGRNP 521
+E R+P
Sbjct: 556 EENRHP 561
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 18/154 (11%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y D++ HY+ G +G++P+ F Y+ + ++
Sbjct: 451 FDTGYYWQQNPDVKLSNVD----PLGHYLDIGASQGKDPNPLFDTSFYLEQYPEVTQLGM 506
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ H+ G ++G F+ YL Y D+ + HY+T G+
Sbjct: 507 NP-------LAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVEL----GINPLLHYLTIGL 555
Query: 600 KEGRALGISGMQFKSVMNLSEKSRDKADLSLSFD 633
+E R L + ++S S D
Sbjct: 556 EENRHPFPCSTIELPSFKLRTEPIISEEISKSLD 589
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 13/105 (12%)
Query: 338 LSDVERLRFA---DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
LS+V+ L Y Y ++ Q+ + H+ G +G
Sbjct: 465 LSNVDPLGHYLDIGASQGKDPNPLFDTSFYLEQYPEVTQL----GMNPLAHYIMIGAKKG 520
Query: 395 R--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
FD+ YL Y D+ G + HY+T G++E R+P
Sbjct: 521 NKPHPLFDTTYYLEQYPDVVE-LGIN---PLLHYLTIGLEENRHP 561
>gi|218245768|ref|YP_002371139.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8801]
gi|218166246|gb|ACK64983.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8801]
Length = 1152
Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 18/137 (13%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
Y D+ + + H+ + G S+G+D FD+ YL
Sbjct: 442 AQIISKSGLFDTGYYWQQNPDVK----LSNVDPLGHYLDIGASQGKDPNPLFDTSFYLEQ 497
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
Y ++ G + HYI G K+G P F Y+ + D++ P L
Sbjct: 498 YPEVTQ-LGMN---PLAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVE-LGINPLL---- 548
Query: 467 KDHFSNFGCEEGRFVTF 483
H+ G EE R
Sbjct: 549 --HYLTIGLEENRHPFP 563
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 18/126 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y D++ HY+ G +G++P+ F Y+ + ++
Sbjct: 451 FDTGYYWQQNPDVK----LSNVDPLGHYLDIGASQGKDPNPLFDTSFYLEQYPEVTQLGM 506
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ G ++G FD+ YL Y D+ + HY+T G+
Sbjct: 507 NP-------LAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVELG----INPLLHYLTIGL 555
Query: 516 KEGRNP 521
+E R+P
Sbjct: 556 EENRHP 561
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 18/155 (11%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y D++ HY+ G +G++P+ F Y+ + ++
Sbjct: 451 FDTGYYWQQNPDVKLSNVD----PLGHYLDIGASQGKDPNPLFDTSFYLEQYPEVTQLGM 506
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ H+ G ++G F+ YL Y D+ + HY+T G+
Sbjct: 507 NP-------LAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVEL----GINPLLHYLTIGL 555
Query: 600 KEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDH 634
+E R L + ++ S D
Sbjct: 556 EENRHPFPCSTIELPSFKLRAEPIVSEEIPKSLDP 590
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 13/105 (12%)
Query: 338 LSDVERLRFA---DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
LS+V+ L Y Y ++ Q+ + H+ G +G
Sbjct: 465 LSNVDPLGHYLDIGASQGKDPNPLFDTSFYLEQYPEVTQL----GMNPLAHYIMIGAKKG 520
Query: 395 R--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
FD+ YL Y D+ G + HY+T G++E R+P
Sbjct: 521 NKPHPLFDTTYYLEQYPDVVE-LGIN---PLLHYLTIGLEENRHP 561
>gi|194043362|ref|XP_001929480.1| PREDICTED: stromelysin-3-like [Sus scrofa]
Length = 491
Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 67/211 (31%), Gaps = 49/211 (23%)
Query: 2 HNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
P + +L W + Y+ + ++ AL
Sbjct: 88 PPGGPSARNRQ-KRFVLSGGRWEKTDLTYRILRFPWQLVR-------EQVRQTVAEALQV 139
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKA 107
WS V LTF E H+DI + + +D + +++FD
Sbjct: 140 WSDVTPLTFTEVHEGHADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYD 199
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ W G +GT L A HE GH LGL H + ++MS F
Sbjct: 200 ETWTVGDNQGTDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSPF- 239
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+F Y + D +Q +YG P
Sbjct: 240 -------YTFRYPLSLSPDDRRGIQHLYGQP 263
>gi|166367829|ref|YP_001660102.1| hypothetical protein MAE_50880 [Microcystis aeruginosa NIES-843]
gi|166090202|dbj|BAG04910.1| hypothetical protein MAE_50880 [Microcystis aeruginosa NIES-843]
Length = 1225
Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 8/167 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y + + D+ G D L+ ++L + ++
Sbjct: 979 GGAGNDTYLFDTDLVLGS--DRLIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLT 1036
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--- 316
+T+A T E+V+G S ND ++GN+ N +GND +G +G D A +
Sbjct: 1037 LTLASATAFENVIGGSLNDNIVGNTLANSLNGGAGNDTLNGGAGNDNLNGGAGNDNLTGG 1096
Query: 317 ---KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ N + L+ + ++ S++
Sbjct: 1097 LGKDTLTGSTGLDTLTYNALGESLLTGFDVIQGYSGTGASLDSINAP 1143
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 11/170 (6%)
Query: 196 GAPKGSLG---NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G G N+ Y + + + D+ G D L+ ++L + +
Sbjct: 865 GGNDTLDGGASNDTYLFDTDLVLNS--DRLIDASGIDTLNFAATTTKTINLNLGSTVAQT 922
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ +T+A T E+V+G S ND ++GN+ N +GND G G DT A
Sbjct: 923 VTAGNLTLTLASATAFENVIGGSLNDNIVGNTLANSLNGGAGNDTLSGLGGNDTLDGGAG 982
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ Y + S ++ L FA ++N+ S +
Sbjct: 983 NDTYLF------DTDLVLGSDRLIDASGIDTLNFAATTTKTINLNLGSTV 1026
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A T++++ G++ ND ++G S + GND G G DT A + Y
Sbjct: 827 ATATILDN-DGNAANDNLVGTSFADALAGVGGNDTLSGLGGNDTLDGGASNDTYLF---- 881
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
N + S ++ L FA ++N+ S +
Sbjct: 882 --DTDLVLNSDRLIDASGIDTLNFAATTTKTINLNLGSTV 919
Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 50/165 (30%), Gaps = 16/165 (9%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + D T + G N + + +++ G GND + G N+ + N
Sbjct: 817 TGYTISGPDNATATILDNDGNAANDNLVGTSFADALAGVGGNDTLSGLGGNDTLDGGASN 876
Query: 296 DV-------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-- 340
D +SG+DT + A + + + + L+
Sbjct: 877 DTYLFDTDLVLNSDRLIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLTLTLASAT 936
Query: 341 -VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + + V + L A + L + G D +
Sbjct: 937 AFENVIGGSLNDNIVGNTLANSLNGGAGNDTLSGLGGNDTLDGGA 981
>gi|220924184|ref|YP_002499486.1| Glycosyltransferase-like protein [Methylobacterium nodulans ORS
2060]
gi|219948791|gb|ACL59183.1| Glycosyltransferase-like protein [Methylobacterium nodulans ORS
2060]
Length = 597
Score = 90.9 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 67/175 (38%), Gaps = 23/175 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ YL D++ G D HY+ G EGR P+ F Y A
Sbjct: 30 FDAEWYLRVNGDVKAA-GLD---PLEHYLGSGAAEGRWPNPLFDPAHYADKAG---LAAG 82
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ P L H + C FD+ Y +Y + G HY++ G +
Sbjct: 83 ENPLLHY----HRAALPCLLDPHPLFDAAFYTRTY---LSRDGLPPIKPLEHYLSVGWRL 135
Query: 518 GRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
G P+ AF Y+A++ D+ + + H+++ G EGR + D+
Sbjct: 136 GFRPNPAFDPRWYLATYADVRESGTEP-------LSHYASSGQREGRWPAGDSDV 183
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 53/163 (32%), Gaps = 25/163 (15%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
Y D+ + ++H+ G +EGR + FD Y +
Sbjct: 35 YLRVNGDVKAA----GLDPLEHYLGSGAAEGRWPNPLFDPAHYAD------KAGLAAGEN 84
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG-- 478
HY + +P F A Y ++ + +H+ + G G
Sbjct: 85 PLLHYHRAALPCLLDPHPLFDAAFYTRTY------LSRDGLPPIKPLEHYLSVGWRLGFR 138
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
FD YL +Y D+R HY + G +EGR P
Sbjct: 139 PNPAFDPRWYLATYADVRESG----TEPLSHYASSGQREGRWP 177
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 51/160 (31%), Gaps = 41/160 (25%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN---- 538
FD+ YL D++ G D HY+ G EGR P+ + A L
Sbjct: 30 FDAEWYLRVNGDVKAA-GLD---PLEHYLGSGAAEGRWPNPLFDPAHYADKAGLAAGENP 85
Query: 539 ----------AFADAPDLVQAG-----------------KDHFSNFGYEEG--RSITFNP 569
D L A +H+ + G+ G + F+P
Sbjct: 86 LLHYHRAALPCLLDPHPLFDAAFYTRTYLSRDGLPPIKPLEHYLSVGWRLGFRPNPAFDP 145
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
YL +Y D+ + HY + G +EGR
Sbjct: 146 RWYLATYADVRE----SGTEPLSHYASSGQREGRWPAGDS 181
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 7/138 (5%)
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+GLD +Y S + R+ N + K + L + + +
Sbjct: 45 AGLDPLEHYLGSGAAE-GRWPNPLFDPAHYADKAGLAAGENPLLHYHRAALPCLLDPHPL 103
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG-R-DITFDSYLYLGSYDDLRNVFGSDR 419
+ + G + ++H+ G G R + FD YL +Y D+R
Sbjct: 104 FDAAFYTRTYLSRDGLPPIKPLEHYLSVGWRLGFRPNPAFDPRWYLATYADVRE----SG 159
Query: 420 GAAARHYITHGVKEGRNP 437
HY + G +EGR P
Sbjct: 160 TEPLSHYASSGQREGRWP 177
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 15/74 (20%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F A Y+ + D+ A D +H+ G EGR F+P Y
Sbjct: 29 LFDAEWYLRVNGDVKAAGLDP-------LEHYLGSGAAEGRWPNPLFDPAHYA------D 75
Query: 581 NVFGSDRSAAAQHY 594
+ HY
Sbjct: 76 KAGLAAGENPLLHY 89
>gi|166365607|ref|YP_001657880.1| hypothetical protein MAE_28660 [Microcystis aeruginosa NIES-843]
gi|166087980|dbj|BAG02688.1| hypothetical protein MAE_28660 [Microcystis aeruginosa NIES-843]
Length = 308
Score = 90.9 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 71/195 (36%), Gaps = 7/195 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+IY +GG D LD T ++L T + + +T
Sbjct: 81 GNDIYCFNASTPLGSDTIQETTTGGIDTLDFTGTN-TAVRVNLGTTAVQTAVTNNLKLTF 139
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + IE+++ SGND + GNS NN GND G +G D L
Sbjct: 140 SANNTIENIISDSGNDRLTGNSLNNTLTGGGGNDQLTGQNGNDRLIGGFGDDLLTGGNGS 199
Query: 323 NAIIVYDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ I +N + DF S +++ + ++ Q I + + V D+
Sbjct: 200 DNFIFNSSNLGIDAISDFTSGSDKIVLSKAIFTAL---QSIIGNGFSQPAEFASVADDDL 256
Query: 380 FESMKHFYEFGLSEG 394
+ F + S G
Sbjct: 257 VATSSAFIVYSNSSG 271
>gi|224072152|ref|XP_002196904.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily b, member 1
[Taeniopygia guttata]
Length = 799
Score = 90.9 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 60/197 (30%), Gaps = 48/197 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + YK + + AL WS V LTF E
Sbjct: 201 VLSGGRWDKTNLTYKIIRFPWQLVK-------AKVRRTIEEALKVWSDVTPLTFTEVQEG 253
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G GT L
Sbjct: 254 RADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNSLGTDLLQ 313
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H S+MS F F Y +
Sbjct: 314 VAAHEFGHVLGLQHTAVSK-------------------SLMSPF--------YIFRYPLS 346
Query: 183 PMVSDIVAVQKIYGAPK 199
D +Q +YG P
Sbjct: 347 LSEDDKQGIQYLYGKPS 363
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 28/84 (33%), Gaps = 27/84 (32%)
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
+GT L A HE GH LGL H S+MS F
Sbjct: 437 RGTDLLQVAAHEFGHVLGLQHTAVSK-------------------SLMSPF--------Y 469
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK 199
F Y + D +Q +YG P
Sbjct: 470 IFRYPLSLSEDDKQGIQYLYGKPS 493
>gi|166365087|ref|YP_001657360.1| hypothetical protein MAE_23460 [Microcystis aeruginosa NIES-843]
gi|166087460|dbj|BAG02168.1| hypothetical protein MAE_23460 [Microcystis aeruginosa NIES-843]
Length = 1748
Score = 90.9 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 71/204 (34%), Gaps = 17/204 (8%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ Y + +GG D L+L+ G N I LN S S+ N+T
Sbjct: 1514 AGNDAYVFTANSYLGLDTISETTTGGIDTLNLS---GTNNPIRLNLGSISNQTVVTGNLT 1570
Query: 262 I--AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + VIE+ G SGND + GNS +N GND G +G D +
Sbjct: 1571 LKLSAVNVIENAFGGSGNDRITGNSLSNALNGGPGNDTLSGGAGNDILTGNQADDILVGG 1630
Query: 320 RFENAIIVYDANEHK---------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ DF + ++L + ++ ++ + D
Sbjct: 1631 VGNDRFSYLTGRAFMASDIGLDTLTDFTPNADKLSLSKTTFSAL---TSTVGNGFSQATD 1687
Query: 371 LIQVIGQDVFESMKHFYEFGLSEG 394
V + E+ F + + G
Sbjct: 1688 FAIVEDDALVETSAAFIVYSSNSG 1711
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 230 LLDLTLIGGVKNYIDL--NTESWSSIGGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNS 284
+D + + + ++ N E ++++ N TI + E++ +GND +
Sbjct: 676 TVDNSGVTLTQANGNVVKNVEVFANLWTGTGNDTINYSVGLRNYENINTGAGNDTINT-- 733
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG D DG +G D S LY + I N +
Sbjct: 734 -------GSGRDTVDGGAGNDLLIVDYSSNLYAGNATYSGGIGSSINPNG 776
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 230 LLDLTLIGGVKNYIDL--NTESWSSIGGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNS 284
+D + I + ++ N E ++++ N TI + E++ +GND +
Sbjct: 848 TVDNSGITLTQANGNVVKNVEVFANLWTGTGNDTINYSVGLRNYENINTGAGNDTINT-- 905
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG D DG +G D S LY + I N +
Sbjct: 906 -------GSGRDTVDGGAGNDLLIVDYSSNLYAGNATYSGGIGSSINPNG 948
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 15/112 (13%)
Query: 230 LLDLTLIGGVKNYIDL--NTESWSSIGGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNS 284
+D + I + ++ N E ++++ N TI + E++ +G+D +
Sbjct: 330 TVDNSGITLTQANGNVVKNVEVFANLSTGSGNDTINYSVGLRNYENINTGAGDDTI---- 385
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQ 335
G D DG G D S LY + + + + N +
Sbjct: 386 -----NPGRGQDTVDGGEGNDLLIVDYSSNLYAGTTTYPSGFLGHAINPNGT 432
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 15/112 (13%)
Query: 230 LLDLTLIGGVKNYIDL--NTESWSSIGGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNS 284
+D + I + ++ N E ++++ N TI + E++ +G+D +
Sbjct: 503 TVDNSGITLTQANGNVVKNVEVFANLSTGSGNDTINYSVGLRNYENINTGAGDDTI---- 558
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQ 335
G D DG G D S LY + + + + N +
Sbjct: 559 -----NPGRGQDTVDGGEGNDLLIVDYSSNLYAGTTTYPSGFLGHAINPNGT 605
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 57/340 (16%), Positives = 102/340 (30%), Gaps = 46/340 (13%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWR-----YGIGKGTILSHNALH-EIGHALGLM 135
S+N Y Y IN + W Y G + + E G
Sbjct: 752 DYSSNLYAGNATYSGGIGSSINPNGFGGWNGYFYAYSRNDGDYDNVTFSNIERFQITGTN 811
Query: 136 HPGSYN-GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+++ GGY V+ +D D + +S + + G T ++V ++
Sbjct: 812 FNDTFDRGGYGVFNIDGGTGTDVIRYADLS--SETTGLTVDNSGITLTQANGNVVKNVEV 869
Query: 195 YGAPKGSLGNNIYKIEV------QQKDSPFIQTIYDSGGDDLLD---------------- 232
+ GN+ V TI G D +D
Sbjct: 870 FANLWTGTGNDTINYSVGLRNYENINTGAGNDTINTGSGRDTVDGGAGNDLLIVDYSSNL 929
Query: 233 ----LTLIGGVKNYIDLNT-ESWSS-IGGYEKNMTIAQHTVIES-----VVGSSGNDVVI 281
T GG+ + I+ N W+ Y +N + + + G++ ND +
Sbjct: 930 YAGNATYSGGIGSSINPNGFGGWNGYFYAYSRNDGDYDNVTFSNIERFQITGTNFNDSLN 989
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSD 340
+++ GND + +G D P+ I + + F L D
Sbjct: 990 TGDGDDIITGGMGNDTLNVRNGNDILIGVDPNSS---NPGRGEIDSFTGGLGRDRFILGD 1046
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V L + D + + +D+IQ+ G
Sbjct: 1047 VSWLGYDDGDSTLAGNNDYAQISDFNPTDDIIQLRGTSSN 1086
Score = 44.3 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 38/114 (33%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++ G++GND +IG + ++ G D DG G D S LY +
Sbjct: 189 VEMQDFTGTNGNDNIIGTAGDDTISPLRGKDAVDGGEGNDLLIVDYSSNLYAGTATYPSG 248
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
IV + + + + D V +I + ++ +
Sbjct: 249 IVVSSLGSNGNGGWNGNLYAYTRNDGDYDVVNFTNIERFQIKGTNVNDTFDRGG 302
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
GN+ NNV +S N+ G +G D + + A SYL + + D L
Sbjct: 1493 TGNAGNNVLTGNSANNTLAGLAGNDAYVFTANSYL-------GLDTISETTTGGIDTL 1543
>gi|300250958|gb|ADJ95797.1| MMP11 protein precursor [Canis lupus familiaris]
Length = 445
Score = 90.9 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 66/198 (33%), Gaps = 48/198 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + Y+ + ++ AL WS+V LTF E
Sbjct: 56 VLSGGRWDKTDLTYRILRFPWQLVR-------EQVRQTVAEALQVWSEVTPLTFTEVHEG 108
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 109 RADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNQGTDLLQ 168
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 169 VAAHEFGHTLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 201
Query: 183 PMVSDIVAVQKIYGAPKG 200
D +Q +YG P+
Sbjct: 202 LSPDDRRGIQHLYGQPRT 219
>gi|192289967|ref|YP_001990572.1| 5'-nucleotidase [Rhodopseudomonas palustris TIE-1]
gi|192283716|gb|ACF00097.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris TIE-1]
Length = 2775
Score = 90.9 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 59/174 (33%), Gaps = 13/174 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+V + I G D + L + + G + N I
Sbjct: 2257 GDDVALSTAAGGFVIDGGAGSDTIALDYTYSGDDV----------LSGGDGNDYIYAGAG 2306
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--KIYRFENAI 325
+ + G + ND + GN +++ +G+D DG +G DT Y Y + +
Sbjct: 2307 NDQIDGGADNDTLFGNDGDDLIKGGAGDDTIDGGAGADTATYAGNFVGYAMSLNTDGSLT 2366
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTASYEDLIQVIGQD 378
+ A + D LS++E+L FAD + + + G D
Sbjct: 2367 VTDQAGTNGTDKLSNIEQLGFADGTWTLRTGTDGNDTITGGTGNDLVFGGAGND 2420
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 59/188 (31%), Gaps = 10/188 (5%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN+ + + TI G D LDL+ G I+ + + G
Sbjct: 2505 GGAGNDTLIGGGGDDVLRGGAGDDTIDGGAGFDTLDLSDATGA-LTINFTAGTATGAGIG 2563
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ IES + G D V G + +V GNDV G +G D A
Sbjct: 2564 TDHFA-----SIESFILGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLLGGAGDDSL 2618
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ ++ S V+ + D D + IL A + + G
Sbjct: 2619 D-GGSGDDVVDGGIGNDTLKGGSGVDVISGGDGNDDIDGGSENDILNGGAGNDIIKGGSG 2677
Query: 377 QDVFESMK 384
D+
Sbjct: 2678 ADIITGGA 2685
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/343 (15%), Positives = 98/343 (28%), Gaps = 44/343 (12%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ I + +G D ++ D G T+ ++ G L
Sbjct: 2275 AGSDTIALDYTYSGDDVLSGGDGNDYI-YAGAGNDQIDGGADNDTLFGND-----GDDLI 2328
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV-- 191
G Y + + MS + G T +S+I +
Sbjct: 2329 KGGAGDDTIDGGAGADTATYAGNFVGYA-MSLNTDGSLTVTDQAGTNGTDKLSNIEQLGF 2387
Query: 192 -QKIYGAPKGSLGNNIYK--------IEVQQKDS---PFIQTIYDSG-GDDLLDLTLIGG 238
+ G+ GN+ D+ + YD G G+D +D +LIG
Sbjct: 2388 ADGTWTLRTGTDGNDTITGGTGNDLVFGGAGNDTFIGGYGLDRYDGGAGEDTIDYSLIGF 2447
Query: 239 VKNYIDLNTE---------------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
K +DL S ++ G T+ + + G G+D ++G
Sbjct: 2448 -KLTVDLGAGRAYYPDYLTGADHLSSIENVIGTAFGDTLIGTDGVNVLNGGLGDDQLLGG 2506
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------YDANEHKQDF 337
+ N+ G+DV G +G DT A + A+ + D
Sbjct: 2507 AGNDTLIGGGGDDVLRGGAGDDTIDGGAGFDTLDLSDATGALTINFTAGTATGAGIGTDH 2566
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +E + ++ + + G D
Sbjct: 2567 FASIESFILGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKL 2609
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 24/189 (12%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSSI-GGYEKNMTIAQHTVI 268
I GG+D++ G L+ S + G N T+ + +
Sbjct: 2583 TGGNGADVINGGGGNDVIAGGAGNDKLLGGAGDDSLDGGSGDDVVDGGIGNDTLKGGSGV 2642
Query: 269 ESV------------------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + G +GND++ G S ++ +GND+ G SG D F +
Sbjct: 2643 DVISGGDGNDDIDGGSENDILNGGAGNDIIKGGSGADIITGGAGNDILTGGSGADVFVFA 2702
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASYE 369
A + F D + ++ + + Q + V V + T +
Sbjct: 2703 AGFGKDIVTDFATKGSSADVLQFSSSMFANFTDVMSHTAQVGNDVVVTLDADNSVTLANL 2762
Query: 370 DLIQVIGQD 378
+ + D
Sbjct: 2763 QIGSLAADD 2771
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYE 257
G+N + T+ GGDD+L D L GG + + + G
Sbjct: 1655 GDNDFTGASGD------DTLVGLGGDDVLIGLGGDDNLDGGDGDDTLDGGDGDDILAGGA 1708
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ T+ + + G G+D +IG ++V G D G +G D
Sbjct: 1709 GDDTLDGGAGDDRLAGGDGDDTLIGGDGDDVLIGGEGYDTLHGGAGNDELVVGEGDSADG 1768
Query: 318 -------IYRFENAIIVYDANEHKQDFLSDV 341
+ E+ I D + +
Sbjct: 1769 GDGDDLFVVSTEDGIPSSIDGGDGNDTVKLI 1799
>gi|119909610|ref|XP_584877.3| PREDICTED: matrix metallopeptidase 11-like [Bos taurus]
gi|297485001|ref|XP_002694738.1| PREDICTED: matrix metallopeptidase 11-like [Bos taurus]
gi|296478350|gb|DAA20465.1| matrix metallopeptidase 11-like [Bos taurus]
Length = 466
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 70/212 (33%), Gaps = 50/212 (23%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
+ + P + +L W + Y+ L + ++ AL
Sbjct: 63 LPDG-PSARNRQ-KRFVLSGGRWEKTDLTYRILRFPWQLLREQV-------RQTVAEALQ 113
Query: 61 EWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDK 106
WS V LTF E +DI + + +D + +++FD
Sbjct: 114 VWSDVTPLTFTEVHEGRADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDY 173
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
+ W G +GT L A HE GH LGL H + ++MS F
Sbjct: 174 DETWTIGDNQGTDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSPF 214
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+F Y + D +Q++YG P
Sbjct: 215 --------YTFRYPLSLSPDDRRGIQQLYGRP 238
>gi|149184368|ref|ZP_01862686.1| type I secretion target repeat protein [Erythrobacter sp. SD-21]
gi|148831688|gb|EDL50121.1| type I secretion target repeat protein [Erythrobacter sp. SD-21]
Length = 1120
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 79/466 (16%), Positives = 134/466 (28%), Gaps = 109/466 (23%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFME 101
+ + QE+AR A+ E+++ L E D+ F+ + + F
Sbjct: 49 SFQQFSQAYQELARQAIAEFTEASGLVAFEVPDGMGDMNFMIFDLALFSVAGGQAAGFAN 108
Query: 102 INFDKADVWRYGI----GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ G + LHEI HALGL H G V+ D S
Sbjct: 109 YPTTGDWADASDVYIDDEIGEENYYLLLHEIAHALGLEHGWE---GTNVFDASVDTAEFS 165
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS---------------- 201
L+S + + G+ T DI A+Q +YG
Sbjct: 166 ILSS------------NGAIGFNGTLEAFDIQAIQYMYGDASADGNSVSSWYWNDQAHIL 213
Query: 202 ---------------LGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLD------------ 232
N IY + +Y GDD +
Sbjct: 214 TQVGLAGADTLRGVGADNIIYGADGDDVIYGRDGADALYGGNGDDTVSGGAGDDEIRGGE 273
Query: 233 --------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ + + I + I G I T + + G +G D++ GNS
Sbjct: 274 GADELFGETSNLTSGDDRIFGDAGDD-YIDGGNGEDLILGGTGADRIFGGTGRDILYGNS 332
Query: 285 ANNVFFESSG------------------NDVFDGSSGLDTFFYYAPS------------Y 314
+ + +G NDV G +G D + S
Sbjct: 333 NADSLYGGAGADVLYAGDGDDYADGGDGNDVMRGGAGNDQLYGERGSGETGNDQIFGELG 392
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQ 373
+Y E + + + L F ++ D++ Y +D L
Sbjct: 393 NDALYGQEGDDWISGGLGADTIQGGNGDDLLFGNEDRDTLLGNAGDDTLYGGGGDDYLQT 452
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVF 415
+G ++ +F L EG + D + + YDD+ +
Sbjct: 453 GLGINLAYGGAGADQFWLDEGNGSLYGGEGDDFFSVWFYDDVSSAH 498
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 15/188 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + F T+Y S DLL+ +L GG N + + + + + N I
Sbjct: 694 GLGANIRGGAFENTLYGSANADLLEGLEGGDSLHGGAGNDVLVGDDRHPNADLIDGNNEI 753
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +G+D + G N+ + GND +G G D A +
Sbjct: 754 DGGP--DYLNGGAGDDRMYGVVGNDQLYGGDGNDRLEGGEGNDILHGGAGIDTVRYVTAT 811
Query: 323 NAI--------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + D D L+ +E +D ++++ + L
Sbjct: 812 SGVRVNLYVTGVWQDTQGAGNDQLNSIENFDGSDFADTVAGTVFSNVIDGRGGDDLLKGG 871
Query: 375 IGQDVFES 382
+G D +
Sbjct: 872 MGNDALKG 879
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-- 321
+ +++ G SGND + GN+ N++ GND+ GS G+DT + +
Sbjct: 969 GNVGTDTLHGGSGNDRLDGNNGNDILRGGDGNDILTGSWGVDTMTGGTEADTFLFKSGHT 1028
Query: 322 ----ENAIIVYDANEHKQDFL 338
NA + D + D +
Sbjct: 1029 GRFATNADTILDFSSEDGDRI 1049
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 62/194 (31%), Gaps = 5/194 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ F I GGDDLL GG+ N + + GY + + +
Sbjct: 845 DFADTVAGTVFSNVIDGRGGDDLLK----GGMGNDALKGGDGDDQLEGYIGDDVLRGGSG 900
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ ++G +G D++ G+ ++ ++G D G +G D + Y + N I++
Sbjct: 901 SDVMIGWTGFDLMFGDGGDDYMKGNNGTDRMFGGTGNDIIEGGNQTD-YLFGQQGNDILL 959
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D + + L IL + L G D
Sbjct: 960 GDDGDDFMQGNVGTDTLHGGSGNDRLDGNNGNDILRGGDGNDILTGSWGVDTMTGGTEAD 1019
Query: 388 EFGLSEGRDITFDS 401
F G F +
Sbjct: 1020 TFLFKSGHTGRFAT 1033
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 9/163 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTES-WSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G+D L+ ++ D + +S+ I G + + +++ G G+D + G
Sbjct: 829 GAGNDQLNSIENFDGSDFADTVAGTVFSNVIDGRGGDDLLKGGMGNDALKGGDGDDQLEG 888
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++V SG+DV G +G D F Y N D +
Sbjct: 889 YIGDDVLRGGSGSDVMIGWTGFDLMFGDGGDD----YMKGNNGTDRMFGGTGNDIIEGGN 944
Query: 343 RLRFADQCIDSVNVKQRSILEYTASY---EDLIQVIGQDVFES 382
+ + + + ++ + L G D +
Sbjct: 945 QTDYLFGQQGNDILLGDDGDDFMQGNVGTDTLHGGSGNDRLDG 987
>gi|170747634|ref|YP_001753894.1| glycosyl transferase family protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654156|gb|ACB23211.1| glycosyl transferase family 2 [Methylobacterium radiotolerans JCM
2831]
Length = 1322
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 80/267 (29%), Gaps = 53/267 (19%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
D+ Y Y +D R Y+ HG + GR+P F + Y+A H +
Sbjct: 50 SPHVDAAFYASWYG-----IAAD---PVRDYLVHGWRAGRDPRPDFDSAAYLARHSHIAR 101
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDS-------------YLYLGSYDDLRNVFGS 501
A + + + E D+ YL DL G
Sbjct: 102 AGINPLLHALARRRGGAGGEGEAAALPRPDTAEAHRLARRLVDGAFYLAGNPDLAAA-GV 160
Query: 502 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG-- 558
D HY+ G +EGR P F L Y + I P + H+ G
Sbjct: 161 D---PVDHYMASGWREGREPAPQFDTLAYCLTRG--ITFATQNPLV------HYVLHGGS 209
Query: 559 -----------YEEGRSITFNPDLYLTSYDD--LWNVFGSDRSAAAQHYITHGMKEGRAL 605
E + F+ Y + + G+ +A +HY+ G RA
Sbjct: 210 ARPDPNAALALRIETLAPYFDAAHYRQRLPEPQAEALAGASDAALLRHYVAEGW---RAR 266
Query: 606 GISGMQFKSVMNLSEKSRDKADLSLSF 632
F + +S +A F
Sbjct: 267 IGPRPDFDPAGYVQARSGSRAVADDPF 293
Score = 90.6 bits (223), Expect = 9e-16, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 77/250 (30%), Gaps = 44/250 (17%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D YL DL G D HY+ G +EGR P F L Y + I
Sbjct: 144 DGAFYLAGNPDLAAA-GVD---PVDHYMASGWREGREPAPQFDTLAYCLTRG--ITFATQ 197
Query: 459 APDLVQVGKDHFSNFG-------------CEEGRFVTFDSYLYLGSYDD--LRNVFGSDR 503
P + H+ G E FD+ Y + + G+
Sbjct: 198 NPLV------HYVLHGGSARPDPNAALALRIETLAPYFDAAHYRQRLPEPQAEALAGASD 251
Query: 504 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP------DLVQAGKDHFSN 556
A RHY+ G + P F Y+ + A AD P + +G + F+
Sbjct: 252 AALLRHYVAEGWRARIGPRPDFDPAGYVQARSG-SRAVADDPFFRYVAETRLSGGEPFAA 310
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
+ D Y +Y D+ H+ G +E R G +++
Sbjct: 311 PHRLNL--PAVDADWYRATYPDV------GGREPFLHFAEAGWRELRDPGPGRSTLAALL 362
Query: 617 NLSEKSRDKA 626
+ +A
Sbjct: 363 RVCGLRPARA 372
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 67/246 (27%), Gaps = 57/246 (23%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
D+ Y +Y D+ H+ G +E R+P +A+ L+
Sbjct: 317 PAVDADWYRATYPDV------GGREPFLHFAEAGWRELRDPGP--GRSTLAA---LLRVC 365
Query: 457 ADAPDLVQVGKDHFSNFGCEE--GRFVT-----------FDSYLYLGSYDDLRNVFGSDR 503
P V + E R FD Y Y S+
Sbjct: 366 GLRPARAPVEDTGWLGAIGRETLDRDALLDLQARLVAGHFDHGFYRARYGL------SEA 419
Query: 504 GAAARHYITHGVKEGRNPDA-FKALEYIASHED------------LINAFADAPDLVQAG 550
A R Y G K GRNP F Y A H L A DL
Sbjct: 420 EDAVRDYCDTGWKTGRNPRPDFNGWAYRAHHPSAEATGLAPFVHHLARALLRGDDLAGDA 479
Query: 551 KDH----------FSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
D F F+ Y+ Y D G + H+++HG +
Sbjct: 480 FDPRYGAPPAEEDAELFEQARLIEPLFDAPWYVKRYPD----TGGFENGPVIHFLSHGQE 535
Query: 601 EGRALG 606
E R
Sbjct: 536 EDRDPS 541
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 34/216 (15%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHFYEFGLSEGRD--ITFDSYLYLGS 407
D++ Q ++ + G + ++++ + + G GR+ F+ + Y
Sbjct: 390 RDALLDLQARLVAGHFDHGFYRARYGLSEAEDAVRDYCDTGWKTGRNPRPDFNGWAYRAH 449
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ + A H++ + +DL D +
Sbjct: 450 HP----SAEATGLAPFVHHLARA---------------LLRGDDLAGDAFDPRYGAPPAE 490
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKA 526
+ F FD+ Y+ Y D G H+++HG +E R+P F
Sbjct: 491 EDAELFEQARLIEPLFDAPWYVKRYPD----TGGFENGPVIHFLSHGQEEDRDPSKTFST 546
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
Y ++ L+ ++ H+ G G
Sbjct: 547 RFYRRAYGHLLGPG-------ESPFLHYVRTGRAAG 575
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 15/103 (14%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
+ FD+ Y+ Y D G H+++HG +E R+P F Y ++ L+
Sbjct: 503 EPLFDAPWYVKRYPD----TGGFENGPVIHFLSHGQEEDRDPSKTFSTRFYRRAYGHLLG 558
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
H+ G G + LG+Y +
Sbjct: 559 PGESP-------FLHYVRTGRAAGLMGCPED---LGTYPPMEA 591
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 49/162 (30%), Gaps = 22/162 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGA 421
Y Y D G + HF G E RD TF + Y +Y L +
Sbjct: 511 YVKRYPD----TGGFENGPVIHFLSHGQEEDRDPSKTFSTRFYRRAYGHLLGP----GES 562
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
HY+ G G + ++ + A D + + R V
Sbjct: 563 PFLHYVRTGRAAGLMGCPED----LGTYPPMEAPAAREWDRLPRALP------IAQARVV 612
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+Y G + LR + A + V + R+PD
Sbjct: 613 VIVP-VYKGRGETLRAIHACLSAPQATPFTLLAVND-RSPDP 652
>gi|75909848|ref|YP_324144.1| Na-Ca exchanger/integrin-beta4 [Anabaena variabilis ATCC 29413]
gi|75703573|gb|ABA23249.1| Na-Ca exchanger/integrin-beta4 [Anabaena variabilis ATCC 29413]
Length = 1180
Score = 90.2 bits (222), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 10/180 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ Y T +GG D +D + G ++L + ++ K
Sbjct: 947 SGGAGNDTYAFVANAALGTDTITETATGGIDTIDFSGSTGA-VRVNLGVTTSQTVNSNLK 1005
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++ + VIE+ G +GND + GN+ NN+ +GND G +G DT + +
Sbjct: 1006 -LILSANNVIENATGGTGNDRLTGNALNNILAGGNGNDQLQGLAGNDTLWGGLGDDILTG 1064
Query: 319 YRFENAIIVYD----ANEHKQDFLS----DVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ + ++ D++S +++ + ++V L A D
Sbjct: 1065 GAGQDKYLFQSSGVFSSSLGVDYISQFDVGQDQIVLSKATFNAVTNSAGQALTDFAVVSD 1124
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 21/171 (12%)
Query: 210 EVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNT------------------ESW 250
+ D +QT+ + G ++ L T G ++ I LN +
Sbjct: 500 SLNISDWSTLQTLISNDGQNNALITTFFNGSQSQIKLNNINPNLLQASDFIFNTNTVNNN 559
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+I G + +++ G +GNDV+ G ++ F +GND F G +G D Y
Sbjct: 560 ETIDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGAGNDTFYGGAGNDIAVYS 619
Query: 311 APSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
Y++ V D AN D L +VE+++F+DQ I N
Sbjct: 620 GTRSQYQVTSSGGVFTVTDTVANRDGVDTLREVEQIQFSDQTITIGNTSPT 670
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYI-------DLNTESWSSIGG 255
+ I + D +Q + + G D L T G ++ I +L S
Sbjct: 216 DKIDVRNLNINDWATLQLLISNDGQDNALITTFSSGSQSQIKLLNINPNLLQASDFIFNT 275
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI + + G GND + G + N+V F G+D F+G G DTF+ A + +
Sbjct: 276 VNLNQTIDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYGGAGNDV 335
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + + ++ +V D QD + DV L D + +
Sbjct: 336 FNLEQLQDNDVVIDFVR-GQDKI-DVRNLNINDWTTLQLLISNDG 378
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYI-------DLNTESWSSIGG 255
+ I + D +Q + + G D L T G ++ I +L S
Sbjct: 77 DKIDVRNLNINDWATLQLLISNDGQDNALITTFSSGSQSRIKLLNINPNLLQASDFIFNT 136
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI + + G GND + G + N+V F G+D F+G G DTF+ A + +
Sbjct: 137 VNLNQTIEGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYGGAGNDV 196
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + + ++ +V D QD + DV L D
Sbjct: 197 FNLEQLQDNDVVIDFVR-GQDKI-DVRNLNIND 227
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYI-------DLNTESWSSIGG 255
+ I + D +Q + + G D L T G ++ I +L S
Sbjct: 355 DKIDVRNLNINDWTTLQLLISNDGQDNALITTFFNGSQSRIKLLNINPNLLQASDFIFNT 414
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI + + G GND + G + N+V F G+D F+G G DTF+ A + +
Sbjct: 415 VNLNQTIEGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYSGAGNDV 474
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + ++ +V DF+ +++ I + Q I + +
Sbjct: 475 FNLEQLQDNDVV-------IDFVRGQDKIDLRSLNISDWSTLQTLISNDGQNNALITTFF 527
Query: 376 GQDVFE 381
+
Sbjct: 528 NGSQSQ 533
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ +++ G+SG+D++ G + N+ GND +G G DT A + ++ +
Sbjct: 4 ISGTNGNDNLSGTSGDDIIQGFNGNDTLSGLGGNDRLEGGRGDDTLTGGAGNDVFNFEQL 63
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFAD 348
++ +V D QD + DV L D
Sbjct: 64 QDNDVVTDFVR-GQDKI-DVRNLNIND 88
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N ++ + + + G +GND + G N+ G+D G +G D F +
Sbjct: 4 ISGTNGNDNLSGTSGDDIIQGFNGNDTLSGLGGNDRLEGGRGDDTLTGGAGNDVFNFEQL 63
Query: 313 SYLYKIYRF 321
+ F
Sbjct: 64 QDNDVVTDF 72
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
++ G + I +++ G GND + G ++ +GNDVF+
Sbjct: 12 NLSGTSGDDIIQGFNGNDTLSGLGGNDRLEGGRGDDTLTGGAGNDVFN 59
Score = 38.6 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G + N+ +SG+D+ G +G DT + + R ++ + N+
Sbjct: 2 DPISGTNGNDNLSGTSGDDIIQGFNGNDTLSGLGGNDRLEGGRGDDTLTGGAGND----- 56
Query: 338 LSDVERLRFADQCIDSVNV 356
+ + E+L+ D D V
Sbjct: 57 VFNFEQLQDNDVVTDFVRG 75
>gi|118098674|ref|XP_001232777.1| PREDICTED: similar to stromelysin-3 [Gallus gallus]
Length = 502
Score = 90.2 bits (222), Expect = 9e-16, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 63/197 (31%), Gaps = 48/197 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + YK + + + AL WS V LTF E
Sbjct: 111 VLSGGRWDKTDLTYKIIRFPWQLVKSKV-------RRTIEEALKVWSDVTPLTFTEVQEG 163
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G GT L
Sbjct: 164 RADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNLGTDLLQ 223
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + S+MS F F Y +
Sbjct: 224 VAAHEFGHVLGLQHT-------------------TVSKSLMSPF--------YIFRYPLS 256
Query: 183 PMVSDIVAVQKIYGAPK 199
D +Q +YG PK
Sbjct: 257 LSEDDKQGIQYLYGKPK 273
>gi|4191265|emb|CAA09055.1| MT5-MMP protein [Mus musculus]
Length = 614
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 66/213 (30%), Gaps = 55/213 (25%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 125 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 177
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 178 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 237
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 238 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 278
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ P D+ +QKIYG P G
Sbjct: 279 HNFKL-----PQ-DDLQGIQKIYGPPAEPSGAT 305
>gi|148699924|gb|EDL31871.1| matrix metallopeptidase 11, isoform CRA_b [Mus musculus]
Length = 516
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 66/196 (33%), Gaps = 48/196 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 103 VLSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEG 155
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 156 RADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQ 215
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 216 VAAHEFGHVLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 248
Query: 183 PMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 249 LSPDDRRGIQHLYGRP 264
>gi|126343573|ref|XP_001374247.1| PREDICTED: similar to phospholipase C gamma 1 [Monodelphis
domestica]
Length = 584
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/196 (23%), Positives = 65/196 (33%), Gaps = 48/196 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + QE+ AL WSKV LTF E +
Sbjct: 196 VLSGGRWEKLNLTYRILRFPWQLVK-------EQVQEMMAEALRVWSKVTPLTFTEVRAG 248
Query: 76 HSDIKFISSNN-----------GYVCTPRYDSRYF--MEINFDKADVWRYGIGKGTILSH 122
+DI + G V + + +++FD + W G GT L
Sbjct: 249 RADIMIDFTRYWHGDNLPFDGPGGVLAHAFFPKTHRQGDVHFDYDETWTAGSDLGTDLLQ 308
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GHALGL H +MS F +F Y +
Sbjct: 309 VAAHEFGHALGLQHSTEAKA-------------------LMSPF--------YTFRYPLS 341
Query: 183 PMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 342 LSADDRRGIQHLYGRP 357
>gi|258541335|ref|YP_003186768.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01]
gi|256632413|dbj|BAH98388.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01]
gi|256635470|dbj|BAI01439.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-03]
gi|256638525|dbj|BAI04487.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-07]
gi|256641579|dbj|BAI07534.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-22]
gi|256644634|dbj|BAI10582.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-26]
gi|256647689|dbj|BAI13630.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-32]
gi|256650742|dbj|BAI16676.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653733|dbj|BAI19660.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-12]
Length = 985
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 93/309 (30%), Gaps = 28/309 (9%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF---GLSEGRDITFDSYLYLGSYDDLRNVFG-SDR 419
Y Y D++ +G E+++ FY L + FD YL Y + N +
Sbjct: 27 YAEKYGDVLNFLGIAGTEALEEFYREKGPALRHSPNPYFDEDWYLQRYPAVANAVEKGEW 86
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ HY G F Y H +L + DH+ N G E+
Sbjct: 87 KSGFDHYCQTGFSSHNPHWLFDREFYFKQHPNLQPNVLEEAGFRNF-YDHYLNVGDEQFL 145
Query: 480 FVTF--DSYLYLGSYDDLRNVFGSDRGAAARHYIT----HGVKEGRNPDAFKALEYIASH 533
++ + YL S + G A + +G R F Y+ ++
Sbjct: 146 TGSWFFNPTAYLKSGH--ARMEGLGAFAQCVSNVQPEQGYGQ---RLSWYFDPEWYLQTY 200
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDR-SAA 590
+ + H+ + F+ + Y + D+ S
Sbjct: 201 PHVRKEV--DSGRWLSALHHYLCNATPTDYNPNAYFSEEFYGSVNHDVSGAVESGNFRNF 258
Query: 591 AQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYY 650
+H++ +G+ E R + N + D D + Y G
Sbjct: 259 YEHFLRYGVHELRKPSANVDLESYYRNAVVQKEVSR-----GDFP--DAFAHYLAHGGRL 311
Query: 651 DSDLYSMHD 659
+ D+ + +
Sbjct: 312 EDDVEGLKE 320
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 69/234 (29%), Gaps = 12/234 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F A Y + D++N A + ++ + G FD YL Y +
Sbjct: 20 SVFDATWYAEKYGDVLNFLGIAG--TEALEEFYREKGPALRHSPNPYFDEDWYLQRYPAV 77
Query: 496 RNVFG-SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
N + + HY G F Y H +L + + DH+
Sbjct: 78 ANAVEKGEWKSGFDHYCQTGFSSHNPHWLFDREFYFKQHPNLQPNVLEEA-GFRNFYDHY 136
Query: 555 SNFG---YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
N G + G S FNP YL S G+ + G + +
Sbjct: 137 LNVGDEQFLTG-SWFFNPTAYLKSGHARMEGLGAFAQCVSNVQPEQGYGQRLSWYFDPEW 195
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDINHDFS 665
+ K D + H + + Y+ + Y +NHD S
Sbjct: 196 YLQTYPHVRKEVDSGRWLSALHHYLCNATPTDYNPNAYFSEEFYG--SVNHDVS 247
>gi|301779359|ref|XP_002925110.1| PREDICTED: stromelysin-3-like [Ailuropoda melanoleuca]
Length = 467
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 66/196 (33%), Gaps = 48/196 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 72 VLSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEG 124
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
H+DI + + +D + +++FD + W G +GT L
Sbjct: 125 HADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNQGTDLLQ 184
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + +MS F +F Y +
Sbjct: 185 VAAHEFGHVLGLQHTPAAKA-------------------LMSPF--------YTFRYPLS 217
Query: 183 PMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 218 LSPDDRRGIQHLYGRP 233
>gi|220922704|ref|YP_002498006.1| hypothetical protein Mnod_2750 [Methylobacterium nodulans ORS 2060]
gi|219947311|gb|ACL57703.1| hypothetical protein Mnod_2750 [Methylobacterium nodulans ORS 2060]
Length = 736
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 82/218 (37%), Gaps = 46/218 (21%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPD---------------- 438
++ FD YL +D+R S + + H++ +G+ EGR+P+
Sbjct: 119 NVLFDEQWYLERNEDVRAAKASGQVYSGFVHFVLYGLHEGRSPNAMLDLARAERCAGEPV 178
Query: 439 ---AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT------------- 482
AF Y++++ + P + + + +G + G V
Sbjct: 179 PAAAFDVASYVSTYPIVEKFLRCFPIIDEAAF--YRLYGRDLGHAVREKPVSVQHRFEEF 236
Query: 483 ----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
FD Y Y + R SD A +HY+T G ++G +P F L Y + + D+
Sbjct: 237 LLDQFDCEFYRAQYLNGRA---SDYE-ALQHYLTVGARDGNSPSKNFDELWYRSFYRDVG 292
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTS 575
A A + +G H+ G E R + L +
Sbjct: 293 EAIAAGE--ILSGFQHYMMSGKVEQRLPCYKLSYALEA 328
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 59/220 (26%), Gaps = 53/220 (24%)
Query: 346 FAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDIT----- 398
FAD C + Y ED+ HF +GL EGR
Sbjct: 108 FADPDCANLSPNVLFDEQWYLERNEDVRAAKASGQVYSGFVHFVLYGLHEGRSPNAMLDL 167
Query: 399 ---------------FDSYLYLGSYDDLRNV---FGSDRGAAARHYITHGVKEG---RN- 436
FD Y+ +Y + F AA Y +G G R
Sbjct: 168 ARAERCAGEPVPAAAFDVASYVSTYPIVEKFLRCFPIIDEAAF--YRLYGRDLGHAVREK 225
Query: 437 ------------PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--T 482
D F Y A + + H+ G +G
Sbjct: 226 PVSVQHRFEEFLLDQFDCEFYRAQY-------LNGRASDYEALQHYLTVGARDGNSPSKN 278
Query: 483 FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNP 521
FD Y Y D+ + + +HY+ G E R P
Sbjct: 279 FDELWYRSFYRDVGEAIAAGEILSGFQHYMMSGKVEQRLP 318
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 72/194 (37%), Gaps = 45/194 (23%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPD---------------- 522
V FD YL +D+R S + + H++ +G+ EGR+P+
Sbjct: 119 NVLFDEQWYLERNEDVRAAKASGQVYSGFVHFVLYGLHEGRSPNAMLDLARAERCAGEPV 178
Query: 523 ---AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT------------- 566
AF Y++++ + P + +A + +G + G ++
Sbjct: 179 PAAAFDVASYVSTYPIVEKFLRCFPIIDEAAF--YRLYGRDLGHAVREKPVSVQHRFEEF 236
Query: 567 ----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG--ISGMQFKSVMNLSE 620
F+ + Y Y N SD A QHY+T G ++G + + ++S
Sbjct: 237 LLDQFDCEFYRAQY---LNGRASDYE-ALQHYLTVGARDGNSPSKNFDELWYRSFYRDVG 292
Query: 621 KSRDKADLSLSFDH 634
++ ++ F H
Sbjct: 293 EAIAAGEILSGFQH 306
>gi|89514399|gb|ABD75068.1| RTX toxin [Ensifer adhaerens]
Length = 234
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 373 QVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ Q + +HF G +EGR + FD++ YL + D+ HY HG
Sbjct: 1 ADVAQSRIDPWRHFLHHGATEGRHANPFFDTHWYLVNNPDV----AFSTINPLIHYWRHG 56
Query: 431 VKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
EGR+P F Y++++ D+ A + H+ +G EGR + +
Sbjct: 57 ALEGRDPHPGFSTGLYLSAYGDVAYAGYNP-------LFHYLKWGRAEGRTIWPSA 105
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 14/112 (12%)
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
R RH++ HG EGR+ + F Y+ ++ D+ + + H+
Sbjct: 1 ADVAQSRIDPWRHFLHHGATEGRHANPFFDTHWYLVNNPDVAFSTINP-------LIHYW 53
Query: 472 NFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
G EGR F + LYL +Y D+ HY+ G EGR
Sbjct: 54 RHGALEGRDPHPGFSTGLYLSAYGDVAYAG----YNPLFHYLKWGRAEGRTI 101
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 12/114 (10%)
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
R RH++ HG EGR+ + F + + + P + H+ G
Sbjct: 3 VAQSRIDPWRHFLHHGATEGRHANPFFDTHWYLVNNPDVAFSTINPLI------HYWRHG 56
Query: 559 YEEGRS--ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
EGR F+ LYL++Y D+ HY+ G EGR + S +
Sbjct: 57 ALEGRDPHPGFSTGLYLSAYGDVAYA----GYNPLFHYLKWGRAEGRTIWPSAI 106
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 31/105 (29%), Gaps = 12/105 (11%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITF 399
Y + D+ + H++ G EGRD F
Sbjct: 12 RHFLHHGATEGRHANPFFDTHWYLVNNPDVA----FSTINPLIHYWRHGALEGRDPHPGF 67
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN--PDAFKA 442
+ LYL +Y D+ HY+ G EGR P A
Sbjct: 68 STGLYLSAYGDVAYA----GYNPLFHYLKWGRAEGRTIWPSAIDG 108
>gi|83312521|ref|YP_422785.1| hypothetical protein amb3422 [Magnetospirillum magneticum AMB-1]
gi|82947362|dbj|BAE52226.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 9529
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ +T+A + +++VG SGNDV+ G S + F GND+ +G SG D +
Sbjct: 2421 NAASRTGAVTVASGSGADTLVGGSGNDVLSGGSGADTFTGGLGNDIINGGSGADKAIFSG 2480
Query: 312 PSYLYKIYRFENAIIVYDAN-----EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ Y+I + V D N D LS +E L+F+D+ + +S A
Sbjct: 2481 AAADYRISMTNGTVTVVDTNPTLNGNDGTDTLSGIETLQFSDRSFTLGSGSGQSAGGGLA 2540
Query: 367 SYEDLIQVIGQDVFESMKH 385
L+ G + H
Sbjct: 2541 ----LVGAAGSGISLVDSH 2555
Score = 77.5 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 58/290 (20%), Positives = 100/290 (34%), Gaps = 41/290 (14%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
+ AS + +D + V + GN+I K+ V T+ G D
Sbjct: 3562 TGYSASTTALNGTVAADTLDVGSGFATIDAGDGNDIVKMNVVDLSQ--AATVIGGLGTDK 3619
Query: 231 LDLTLIGGVK---------------NYIDLNTESWSSIGGYEKNMTIA-------QHTVI 268
L L+ G + L+ + S + + + + T
Sbjct: 3620 LVLSGTGAASLSKLSGVESVELTGSGAVALSLGAGSGVSTLDASASTGSLALDASAATGA 3679
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+V+ SG ++G N+ F SGND+F+G +G DT ++ + Y I ++V
Sbjct: 3680 LNVIAGSGATSLLGGVGNDTFTGGSGNDLFNGGTGTDTAKFHGNAAGYSIRAASGGVVVQ 3739
Query: 329 DAN----EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D N D L+ VE L FAD+ + + + + + G ++
Sbjct: 3740 DTNTVDGNDGTDSLAGVETLVFADRTLTLSGSSLSPVATVGTATQVNVMDAGNQAPNAIT 3799
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ G YL S+ L + G A+ Y G K G
Sbjct: 3800 ALADGG-------------YLVSWQSLDQDAVGNWGNIAQRYNAAGNKVG 3836
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 75/219 (34%), Gaps = 12/219 (5%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ G ND + +SV + S ++SD + + G
Sbjct: 2956 SSVLGGAGNDTLTATGTSSVTTLDGGSGSDTLTGGAGNDIFILSDFSSTDSV----NGGA 3011
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN++ ++ + G ++L L G + + + SS G+ +
Sbjct: 3012 GNDVLRLTFTTTGVVADSAFTNIHGVEVLTLAASGAP---LSVAMGTVSSGAGFSILDAL 3068
Query: 263 AQHTVIESVVGSSGND-VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ G VIG + F SGNDVFDG G D ++ Y+I
Sbjct: 3069 NTDAGVAVDATGRGAPLTVIGGFGADTFTGGSGNDVFDGGFGADQARFHGNLDGYRISTG 3128
Query: 322 ENAIIVYDAN----EHKQDFLSDVERLRFADQCIDSVNV 356
+ V D N D LS VE L FAD+ +
Sbjct: 3129 TGGVTVTDINTVGGNDGTDTLSGVETLVFADRTLTLSGT 3167
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 86/249 (34%), Gaps = 23/249 (9%)
Query: 141 NGGYPVYGVDNDYENDSFLTSV---MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
N G + VD ND T+ ++ S T ++SDI + +
Sbjct: 4184 NVGDGIASVDGGAGNDIITTTSGGGVTLNGGAGSDTLTGGTGNDTFILSDISSADSV--- 4240
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT-ESWSSIGGY 256
G G +I + + G + L L + G + + S S I
Sbjct: 4241 -NGGAGKDILSLNFTSGGVVVDSAFTNVGNVETLML-GVSGSPLSLTMGPLASGSGITTV 4298
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ +++ A T+ S + S +IG AN+ +G DV G++G DTF + A +
Sbjct: 4299 DAHLSTANVTL--SALADSAVQTLIGGMANDTLIAGAGGDVLTGNAGADTFVFSAGT--- 4353
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ A DF + ++ + + + + + ++ +G
Sbjct: 4354 --------VSTQAAPAVITDFATGLDHVDLS-AAGGLAYAPSIAWMGSVENSAAMVSSLG 4404
Query: 377 QDVFESMKH 385
Q+V
Sbjct: 4405 QNVVGFFTD 4413
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 62/188 (32%), Gaps = 28/188 (14%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK--------NMTIAQHT 266
++ G D + L + G + + S S GG + A+
Sbjct: 2871 AGTGTTSMMGGAGTDTISLQMAEGA-ATFNGSGGSLSITGGGSAYLYGVEQVAFSDAKTV 2929
Query: 267 VIES------VVGSSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFY 309
+++ + G +G DV+ S + +GND DG SG DT
Sbjct: 2930 SVDNKGGYLTLTGGTGADVINVGSGISSVLGGAGNDTLTATGTSSVTTLDGGSGSDTLTG 2989
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A + ++ + F + V + L+ AD +++ +L AS
Sbjct: 2990 GAGNDIFILSDFSSTDSVNGGAGNDVLRLTFTTTGVVADSAFTNIHG--VEVLTLAASGA 3047
Query: 370 DLIQVIGQ 377
L +G
Sbjct: 3048 PLSVAMGT 3055
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 71/221 (32%), Gaps = 48/221 (21%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG----------GVKNYIDLNTES 249
G GN+ Y + TI D+ G ++LD + +G G IDL+ +
Sbjct: 2035 GGSGNDTYVAAATASGT---LTIIDTAGSNILDGSKVGDAGFKGARQVGNDLVIDLSANA 2091
Query: 250 ----------WSSIGGYEKNM----------TIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++ G ++ +A ++ GS G+D+ N+A
Sbjct: 2092 GGGQLVVKDQYAGTGAGIGSILTGSTHSPSSAVATSLTGGTLTGSIGDDIFAYNAAVTTM 2151
Query: 290 FESSGNDVFDGSSGL-----DTFFYYAPSYLYKIY-----RFENAIIVYDANEHKQDFLS 339
+ G D F D+ S++Y + D L+
Sbjct: 2152 VGNGGEDTFFAGGANQTITGDSLAGGKVSFVYAAGPVTASLVGGVATLTGGTATYTDTLT 2211
Query: 340 DV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ E FAD + S +S LE A + L G
Sbjct: 2212 YITELEGSNFAD--VLSGAASGQSGLEGGAGSDTLTGGTGF 2250
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 18/184 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI----- 253
GN++ K+ + T+ G D L L+ IG + + S I
Sbjct: 2774 NAGDGNDVIKMSAADLAAAT--TVIGGQGTDRLTLSGIGVISPT---DQAKLSGIEELAL 2828
Query: 254 -GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN----VFFESSGNDVFDGSSGLDTFF 308
G +++ + + ++ S+ + V +++ +G G +G DT
Sbjct: 2829 TGAGNLGLSLVGGSGLSTIDASTNSGTVSLDASAVSSGVTLLAGTGTTSMMGGAGTDTIS 2888
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
++ + +L VE++ F+D SV+ K + +
Sbjct: 2889 LQMAEGAATFNGSGGSLSITG---GGSAYLYGVEQVAFSDAKTVSVDNKGGYLTLTGGTG 2945
Query: 369 EDLI 372
D+I
Sbjct: 2946 ADVI 2949
Score = 40.5 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 71/219 (32%), Gaps = 34/219 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI---DLNTESWS- 251
G GS+G++I+ + T+ +GG+D GG I L S
Sbjct: 2131 GTLTGSIGDDIFAYNAA------VTTMVGNGGEDTF---FAGGANQTITGDSLAGGKVSF 2181
Query: 252 -------------SIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNV-FFESSGN 295
+ T+ I + GS+ DV+ G ++ +G+
Sbjct: 2182 VYAAGPVTASLVGGVATLTGGTATYTDTLTYITELEGSNFADVLSGAASGQSGLEGGAGS 2241
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G +G T Y + ++ + A + + + D ++
Sbjct: 2242 DTLTGGTGFVTASYKHAAAGIIANLSGSSYLGVAAGKAVDSYYVNGTLTAGTDTLVNIQG 2301
Query: 356 VKQRSI-----LEYTASYEDLIQVIGQDVFESMKHFYEF 389
V+ S TA+Y D++ G DV + F
Sbjct: 2302 VRGSSFADHIKGGDTAAYYDIVGGGGADVLVAGNSAVNF 2340
>gi|6678894|ref|NP_032632.1| stromelysin-3 precursor [Mus musculus]
gi|1352125|sp|Q02853|MMP11_MOUSE RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
Precursor
gi|467683|emb|CAA78248.1| stromelysin-3 [Mus musculus]
gi|74209127|dbj|BAE24956.1| unnamed protein product [Mus musculus]
gi|148699922|gb|EDL31869.1| matrix metallopeptidase 11, isoform CRA_a [Mus musculus]
gi|148699923|gb|EDL31870.1| matrix metallopeptidase 11, isoform CRA_a [Mus musculus]
Length = 492
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 65/196 (33%), Gaps = 48/196 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + ++ AL WS+V LTF E
Sbjct: 103 VLSGGRWEKTDLTYRILRFPWQLVR-------EQVRQTVAEALQVWSEVTPLTFTEVHEG 155
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 156 RADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQ 215
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 216 VAAHEFGHVLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 248
Query: 183 PMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 249 LSPDDRRGIQHLYGRP 264
>gi|218670181|ref|ZP_03519852.1| putative rhizobiocin [Rhizobium etli GR56]
Length = 193
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 21/141 (14%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------GYEKNMTIAQ 264
+ TI+D GG D DL IDL+ +S G N A+
Sbjct: 11 TPAANRIFATIWDGGGTDTYDLRAYTSA-LKIDLHAGGYSVFSQGQLAYLGGGPNDGYAR 69
Query: 265 HTV-------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ IE+V SGND ++GN A+N + ++GND G +G DT A
Sbjct: 70 GNIFNALLYHDNVASLIENVWAGSGNDTIVGNEADNTLWGNAGNDTLTGDAGNDTLDGGA 129
Query: 312 PSYLYKIYRFENAIIVYDANE 332
+ IV +A++
Sbjct: 130 GIDKLSGGVGNDIYIVDNASD 150
>gi|326387768|ref|ZP_08209374.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207814|gb|EGD58625.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Novosphingobium nitrogenifigens
DSM 19370]
Length = 229
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 66/196 (33%), Gaps = 26/196 (13%)
Query: 14 ADHLLRDQYW-SNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGEWSKVVDLTFE 71
+ W + ++ + L + + + + A W+ V ++ F
Sbjct: 42 VTQISYSFPWLNGVGSKFISGYGSGENLRVNSPSSVTASDVTYIGQAFQAWAAVANVNFT 101
Query: 72 ETSIH-----SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG------IGKGTIL 120
+ + DI+ + Y + D+W T
Sbjct: 102 QVTETNAGQVGDIRIAFTGVIPSQYWGYTIVTSDGADNSNGDIWISNSVRSESFAPYTYN 161
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM----MDAS 176
+ LHEIGHALGL HP Y D+ ++MSY PQ++ +
Sbjct: 162 YNAILHEIGHALGLKHPFEAPTIPSGY--------DNRRFTIMSYTDPQNAYWYDKSTGT 213
Query: 177 FGYC-ATPMVSDIVAV 191
+ Y TPMV DI AV
Sbjct: 214 YKYLIMTPMVYDIAAV 229
>gi|281343872|gb|EFB19456.1| hypothetical protein PANDA_014527 [Ailuropoda melanoleuca]
Length = 446
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 66/196 (33%), Gaps = 48/196 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 60 VLSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEG 112
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
H+DI + + +D + +++FD + W G +GT L
Sbjct: 113 HADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNQGTDLLQ 172
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + +MS F +F Y +
Sbjct: 173 VAAHEFGHVLGLQHTPAAKA-------------------LMSPF--------YTFRYPLS 205
Query: 183 PMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 206 LSPDDRRGIQHLYGRP 221
>gi|170747994|ref|YP_001754254.1| glycosyl transferase family protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654516|gb|ACB23571.1| glycosyl transferase family 2 [Methylobacterium radiotolerans JCM
2831]
Length = 1313
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 81/267 (30%), Gaps = 53/267 (19%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
D+ Y Y +D R Y+ HG + GR+P F + Y+A+H +
Sbjct: 56 SPHVDAAFYASWYG-----IAAD---PVRDYLVHGWRAGRDPRPDFDSAAYLAAHPHIAR 107
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDS-------------YLYLGSYDDLRNVFGS 501
A + + + E D+ YL DL G
Sbjct: 108 AGINPLLHALARRRGGAGGEGEAAALPRPDTAEAHRLARRLVDGAFYLAGNPDLAAA-GV 166
Query: 502 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG-- 558
D HY+ G +EGR P F L Y + I P + H+ G
Sbjct: 167 D---PVDHYMASGWREGREPAPQFDTLAYCLTRG--ITFATQNPLV------HYVLHGGP 215
Query: 559 -----------YEEGRSITFNPDLYLTSYDD--LWNVFGSDRSAAAQHYITHGMKEGRAL 605
E + F+ Y + + G+ +A +HY+ G RA
Sbjct: 216 ARPDPDAALILRIETLAPYFDAAHYRQRLPEPQAEALAGASDAALLRHYVAEGW---RAR 272
Query: 606 GISGMQFKSVMNLSEKSRDKADLSLSF 632
F + ++ +A F
Sbjct: 273 IGPRPDFDPAGYVQARAGSRAVSDDPF 299
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/244 (18%), Positives = 70/244 (28%), Gaps = 32/244 (13%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEY--------IASHE 450
D YL DL G D HY+ G +EGR P F L Y +
Sbjct: 150 DGAFYLAGNPDLAAA-GVD---PVDHYMASGWREGREPAPQFDTLAYCLTRGITFATQNP 205
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD--LRNVFGSDRGAAAR 508
+ P E FD+ Y + + G+ A R
Sbjct: 206 LVHYVLHGGPARPDPDAALIL---RIETLAPYFDAAHYRQRLPEPQAEALAGASDAALLR 262
Query: 509 HYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA-----PDLVQAGKDHFSNFGYEEG 562
HY+ G + P F Y+ + D + +G + F+
Sbjct: 263 HYVAEGWRARIGPRPDFDPAGYVQARAGSRAVSDDPFFRYVAETRLSGGEPFAAPHRLNL 322
Query: 563 RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKS 622
+ D Y +Y D+ H+ G +E R G +++ +
Sbjct: 323 --PAVDADWYRATYPDV------GGREPFLHFAEAGWRELRDPGPGRSTLAALLRVCGLR 374
Query: 623 RDKA 626
+A
Sbjct: 375 PARA 378
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/244 (17%), Positives = 65/244 (26%), Gaps = 57/244 (23%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
D+ Y +Y D+ H+ G +E R+P +A+ +
Sbjct: 323 PAVDADWYRATYPDV------GGREPFLHFAEAGWRELRDPGP--GRSTLAALLRVCGLR 374
Query: 457 ADAPDLVQVGKDHFSNFGCE--------EGRFVT--FDSYLYLGSYDDLRNVFGSDRGAA 506
+ G + R V FD Y Y S+ A
Sbjct: 375 PARAPVEDTAWLGAIGQGALDRDALLDLQARLVAGHFDHGFYRARYGL------SEADDA 428
Query: 507 ARHYITHGVKEGRNPDA-FKALEYIASHED------------LINAFADAPDLVQAGKDH 553
R Y G ++GRNP F Y +H L A D+
Sbjct: 429 VRDYCDTGWRKGRNPRPDFDGQAYADAHPGMRETGLAPLVHRLATALMHGTDIAAGAFHP 488
Query: 554 FSNFGYEEGRSIT-----------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
+G + R F+ Y D A H++ +G EG
Sbjct: 489 --RYGTPDSREAALADEARTVAPFFDAAFYAKRNPDAA-------DAPLAHFVAYGQHEG 539
Query: 603 RALG 606
R
Sbjct: 540 RDPS 543
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 28/214 (13%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHFYEFGLSEGRDI--TFDSYLYLGS 407
D++ Q ++ + G + ++++ + + G +GR+ FD Y +
Sbjct: 396 RDALLDLQARLVAGHFDHGFYRARYGLSEADDAVRDYCDTGWRKGRNPRPDFDGQAYADA 455
Query: 408 YDDLRN--------------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+ +R + G+D A A H +G + R +A D
Sbjct: 456 HPGMRETGLAPLVHRLATALMHGTDIAAGAFH-PRYGTPDSREAALADEARTVAPFFDAA 514
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
PD HF +G EGR + F Y +Y L + + HY+
Sbjct: 515 FYAKRNPDAADAPLAHFVAYGQHEGRDPSKTFSIAFYRETYGHLL----APGESPFLHYV 570
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+ GR E + ++ + ADA D
Sbjct: 571 ----RTGRTAGLMGCPEDLGTYPPMEAPAADAWD 600
>gi|170742130|ref|YP_001770785.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
gi|168196404|gb|ACA18351.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
Length = 535
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 57/158 (36%), Gaps = 22/158 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D+ + ++H+ + G EGR + F + YL SY +R
Sbjct: 7 YRRTYPDVSA----SGADPIRHYVDHGSREGRMPNPLFRPHWYLDSYPHVRTA----DVN 58
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
HYI HGV+ G P F Y AS+ D A HF E
Sbjct: 59 PLVHYIRHGVEHGLKPHPLFDTAWYDASYPDAAAAGLHP-------LAHFLT--RNEDSR 109
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+ L SY D ++ AA HY+ G E
Sbjct: 110 YNPNPLFDLASYIDSHSLPLDSNIAALEHYM--GTDEN 145
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 61/178 (34%), Gaps = 28/178 (15%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y ++ D+ + AD H+ + G EGR F + YL SY +R
Sbjct: 2 FDVDWYRRTYPDVSASGADP-------IRHYVDHGSREGRMPNPLFRPHWYLDSYPHVRT 54
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
HYI HGV+ G P F Y AS+ D A HF
Sbjct: 55 A----DVNPLVHYIRHGVEHGLKPHPLFDTAWYDASYPDAAAAGLHP-------LAHFLT 103
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE---GRALGISGMQ 611
E NP L SY D ++ AA +HY+ G E GR
Sbjct: 104 --RNEDSRYNPNPLFDLASYIDSHSLPLDSNIAALEHYM--GTDENLSGRTARPGPAS 157
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 71/186 (38%), Gaps = 29/186 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y +Y D+ + G+D RHY+ HG +EGR P+ F+ Y+ S+ + A
Sbjct: 2 FDVDWYRRTYPDV-SASGAD---PIRHYVDHGSREGRMPNPLFRPHWYLDSYPHVRTADV 57
Query: 458 DAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ G E G FD+ Y SY D H++T
Sbjct: 58 NP-------LVHYIRHGVEHGLKPHPLFDTAWYDASYPDAAAAGLH----PLAHFLTRNE 106
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE---GRSITFNPDLY 572
NP+ +AS+ I++ + D A +H+ G +E GR+ P
Sbjct: 107 DSRYNPNPLFD---LASY---IDSHSLPLDSNIAALEHYM--GTDENLSGRTARPGPAST 158
Query: 573 LTSYDD 578
Sbjct: 159 RAGNGP 164
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 17/106 (16%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
F+ D Y +Y D+ + G+D +HY+ HG +EGR + F+ L +
Sbjct: 2 FDVDWYRRTYPDV-SASGAD---PIRHYVDHGSREGR---MPNPLFRPHWYLDSYPHVRT 54
Query: 627 DLSLSFDH----------KKVDLYTDYFGDGNYYDSDLYSMHDINH 662
H K L+ + D +Y D+ +H + H
Sbjct: 55 ADVNPLVHYIRHGVEHGLKPHPLFDTAWYDASYPDAAAAGLHPLAH 100
>gi|46203002|ref|ZP_00208751.1| COG1216: Predicted glycosyltransferases [Magnetospirillum
magnetotacticum MS-1]
Length = 800
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 84/285 (29%), Gaps = 43/285 (15%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYD 409
+ Y ++Y D+ G + + H+ + G EGRD + F + Y+ +
Sbjct: 17 AATAAPFFDAAFYLSAYPDVAAGGG----DPLLHYLDHGWLEGRDPSAVFSTLYYIDRHL 72
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG--- 466
R HY E ++ A ++ F DAP +
Sbjct: 73 ADRA-----PANPLLHYAGLTPAERLRVATQPGADFPALQAEVAAPFFDAPYYARRAGLG 127
Query: 467 -----KDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
H+ G G F YL + +R + + H+ +G
Sbjct: 128 SGEDPLAHYLTKGWRRGLDPNDAFAGDTYLQRHAHMRRLG----VSPLYHFAATRRLQGA 183
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL 579
A + ++ AD + A E + F+ + YL + D+
Sbjct: 184 EAATAPAR---RAKPPVVALPADPAEATDAQI--------YEAVAAEFDREHYLETNADI 232
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
+H++ G +E R F + R+
Sbjct: 233 RR----SGIDPVRHFLDFGAREDRD---PSPSFSVRYYRKQYRRE 270
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/297 (19%), Positives = 82/297 (27%), Gaps = 104/297 (35%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH------ 449
FD+ YL +Y D+ + G HY+ HG EGR+P A F L YI H
Sbjct: 22 PFFDAAFYLSAYPDV----AAGGGDPLLHYLDHGWLEGRDPSAVFSTLYYIDRHLADRAP 77
Query: 450 ------------------------------EDLINAFADAPDLVQVG--------KDHFS 471
++ F DAP + H+
Sbjct: 78 ANPLLHYAGLTPAERLRVATQPGADFPALQAEVAAPFFDAPYYARRAGLGSGEDPLAHYL 137
Query: 472 NFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI--------THGVKEGRNP 521
G G F YL + +R + + H+ R
Sbjct: 138 TKGWRRGLDPNDAFAGDTYLQRHAHMRRLG----VSPLYHFAATRRLQGAEAATAPARRA 193
Query: 522 DA------------------------FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
F Y+ ++ D+ + D HF +F
Sbjct: 194 KPPVVALPADPAEATDAQIYEAVAAEFDREHYLETNADIRRSGIDP-------VRHFLDF 246
Query: 558 GYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
G E R S +F+ Y Y G+ HY+ G RALG F
Sbjct: 247 GAREDRDPSPSFSVRYYRKQY---RREIGAG-INPFVHYLAVG----RALGFRPTPF 295
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 20/150 (13%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
FA + + ++ + + YE +E FD
Sbjct: 172 YHFAATRRLQGAEAATAPAR--RAKPPVVALPADPAEATDAQIYEAVAAE-----FDREH 224
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDL 462
YL + D+R G D RH++ G +E R+P F Y + I A +
Sbjct: 225 YLETNADIRRS-GID---PVRHFLDFGAREDRDPSPSFSVRYYRKQYRREIGAGINP--- 277
Query: 463 VQVGKDHFSNFGCEEG-RFVTFDSYLYLGS 491
H+ G G R F +
Sbjct: 278 ----FVHYLAVGRALGFRPTPFGLGTWPAQ 303
>gi|75910921|ref|YP_325217.1| polymorphic membrane protein [Anabaena variabilis ATCC 29413]
gi|75704646|gb|ABA24322.1| Polymorphic membrane protein [Anabaena variabilis ATCC 29413]
Length = 1037
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 14/205 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G++ Y +GG+D + ++L T + +I K
Sbjct: 801 TGGNGDDTYNFNASTPLGSDRIQEITTGGNDTISFAGTNNA-ARVNLGTIATQTINSNLK 859
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+T++ + VIE+VVG +G+D +IGNS NN +GNDV G G DT + + +
Sbjct: 860 -LTLSANNVIENVVGGNGSDRLIGNSLNNTLTGGNGNDVLTGRGGADTLIGGSGNDILTG 918
Query: 319 YRFENAII-----VYDANEHKQDFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + +N+ D L+D ++L + + ++ I + +
Sbjct: 919 GTESDRFLYSSGRAFTSNDFGIDILTDFTSGSDKLVLSKRTFTAL---SSVIGDGLSQVS 975
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEG 394
D V D+ + F + + G
Sbjct: 976 DFTTVEDDDLAATSTAFLVYSIGSG 1000
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG-SSGNDVVIGNSAN 286
++ L + L I + + + + ++T IE++ S N GNS+N
Sbjct: 729 NETLRVNLSSPTNATIQKASGTVTITDTLQASVTTTLAEGIENLTLLGSSNINATGNSSN 788
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPS-----YLYKIYRFENAIIVYDANEHKQDF 337
N +SGN++ G +G DT+ + A + + +I N I + +
Sbjct: 789 NTLTGNSGNNILTGGNGDDTYNFNASTPLGSDRIQEITTGGNDTISFAGTNNAARV 844
>gi|116071371|ref|ZP_01468640.1| Peptidase, metallopeptidase [Synechococcus sp. BL107]
gi|116066776|gb|EAU72533.1| Peptidase, metallopeptidase [Synechococcus sp. BL107]
Length = 379
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/298 (20%), Positives = 114/298 (38%), Gaps = 34/298 (11%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP-RYDSRYFME 101
D + L P + A+ + + ++DL F ET ++ ++ + R ++
Sbjct: 35 DSSTLIPGYIDWAQNYIKQVDAIIDLDFIETGNINNSTISFHVRNHIPSDENILGRCSLK 94
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
+ +AD + + +HE GHALGL PG D ++ D +
Sbjct: 95 GTWIEADTYLSNRATTNSNYNTFIHEFGHALGLGEPG----------YDTRWDQDD---T 141
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQ 220
MSY D + + T +D A+ I+G+ + G++ + Q+ +
Sbjct: 142 SMSYNS-----SDITGDFNITYTSNDWDALLSIWGSEDHAKSGDSAANLLFGQRGDTPSE 196
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+IY G DL+ GG + I G + TI + + G + +D +
Sbjct: 197 SIYGLDGSDLI--FGFGGKDSLI-----------GGNGSDTIYGGYGGDILDGGNQDDEI 243
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
G+ ++ +G+D G DT F + + + N I N+ +QD +
Sbjct: 244 YGSHGSDYILGRAGSDNVFAGQGADTIFGGSGADFIRGGGGPNN-IDAGENDGQQDHI 300
>gi|240143531|ref|ZP_04742132.1| VanW domain protein [Roseburia intestinalis L1-82]
gi|257204568|gb|EEV02853.1| VanW domain protein [Roseburia intestinalis L1-82]
Length = 293
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
S Y ++Y D+ G + HF +GL EGR + F+ Y Y D
Sbjct: 37 SAYQAVFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYAD 96
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRN 436
L+ FG D A RHY+T G EGR+
Sbjct: 97 LQQAFGDDMAAYCRHYVTCGKAEGRD 122
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y +++ D+ AF + A +HF N+G EGRS + FNP Y Y DL
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISG 609
FG D +A +HY+T G EGR G +G
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRDGGGTG 127
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F A Y +++ D+ AF + +HF N+G EGR + F+ Y Y DL+
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 498 VFGSDRGAAARHYITHGVKEGRN 520
FG D A RHY+T G EGR+
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRD 122
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 42 VFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAF 101
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR 479
D + H+ G EGR
Sbjct: 102 GDD---MAAYCRHYVTCGKAEGR 121
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL A
Sbjct: 41 AVFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQA 100
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
F D + A H+ G EGR
Sbjct: 101 FGDD---MAAYCRHYVTCGKAEGR 121
>gi|163853098|ref|YP_001641141.1| lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium extorquens PA1]
gi|163664703|gb|ABY32070.1| Lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium extorquens PA1]
Length = 916
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 60/201 (29%), Gaps = 49/201 (24%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL D+ G+ HY+ HG +EGR P+ F Y + +
Sbjct: 35 PYFDVKFYLQENPDV----GASNQNPILHYLEHGSREGRRPNLDFDTQFYKQKY---VAE 87
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT-----------------------FDSYLYLGSY 492
D + + G +G + FD+ YL
Sbjct: 88 IGDTEPFLY-----YIMSGKGKGHATSDGSPYVSYRARKDFPDYQLVAEEFDTEYYLNEN 142
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGK 551
D+ + HY+ HG +EGR P F Y + I
Sbjct: 143 RDIH----DSKVDPISHYLQHGEREGRRPIPDFNPTFYAQEYSSEIGEMGP--------F 190
Query: 552 DHFSNFGYEEGRSITFNPDLY 572
H+ +G ++G Y
Sbjct: 191 IHYIRYGRKKGYKGAREEYYY 211
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 57/189 (30%), Gaps = 50/189 (26%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y+ + D+ + + H+ G EGR FD+ Y Y
Sbjct: 37 FDVKFYLQENPDVGASNQNP-------ILHYLEHGSREGRRPNLDFDTQFYKQKY----- 84
Query: 498 VFGSDRGAAARHYITHGVKEG--------------RN--------PDAFKALEYIASHED 535
V +YI G +G R + F Y+ + D
Sbjct: 85 VAEIGDTEPFLYYIMSGKGKGHATSDGSPYVSYRARKDFPDYQLVAEEFDTEYYLNENRD 144
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
+ ++ D H+ G EGR FNP Y Y G H
Sbjct: 145 IHDSKVDP-------ISHYLQHGEREGRRPIPDFNPTFYAQEYSSEIGEMG-----PFIH 192
Query: 594 YITHGMKEG 602
YI +G K+G
Sbjct: 193 YIRYGRKKG 201
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 55/186 (29%), Gaps = 47/186 (25%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
+ Y D+ G + H+ E G EGR FD+ Y Y V
Sbjct: 37 FDVKFYLQENPDV----GASNQNPILHYLEHGSREGRRPNLDFDTQFYKQKY-----VAE 87
Query: 417 SDRGAAARHYITHGVKEG--------------RN--------PDAFKALEYIASHEDLIN 454
+YI G +G R + F Y+ + D+ +
Sbjct: 88 IGDTEPFLYYIMSGKGKGHATSDGSPYVSYRARKDFPDYQLVAEEFDTEYYLNENRDIHD 147
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
+ D H+ G EGR F+ Y Y G HYI
Sbjct: 148 SKVDP-------ISHYLQHGEREGRRPIPDFNPTFYAQEYSSEIGEMG-----PFIHYIR 195
Query: 513 HGVKEG 518
+G K+G
Sbjct: 196 YGRKKG 201
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 27/158 (17%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH-------E 534
FD YL D+ G+ HY+ HG +EGR P+ F Y + E
Sbjct: 37 FDVKFYLQENPDV----GASNQNPILHYLEHGSREGRRPNLDFDTQFYKQKYVAEIGDTE 92
Query: 535 DLINAFADAPDLVQAGKD--HFSNFGYEEGRSI------TFNPDLYLTSYDDLWNVFGSD 586
+ A D + ++ + F+ + YL D+
Sbjct: 93 PFLYYIMSGKGKGHATSDGSPYVSYRARKDFPDYQLVAEEFDTEYYLNENRDIH----DS 148
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
+ HY+ HG +EGR F E S +
Sbjct: 149 KVDPISHYLQHGEREGRRPIPD---FNPTFYAQEYSSE 183
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 13/94 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ YL D+ + HY+ HG +EGR P F Y + I
Sbjct: 133 FDTEYYLNENRDIH----DSKVDPISHYLQHGEREGRRPIPDFNPTFYAQEYSSEIGEMG 188
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
H+ +G ++G + Y Y
Sbjct: 189 P--------FIHYIRYGRKKGYKGAREEYYYSNQ 214
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 13/76 (17%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+ YL D+ G+ HY+ HG +EGR + ++ +
Sbjct: 35 PYFDVKFYLQENPDV----GASNQNPILHYLEHGSREGR---------RPNLDFDTQFYK 81
Query: 625 KADLSLSFDHKKVDLY 640
+ ++ D + Y
Sbjct: 82 QKYVAEIGDTEPFLYY 97
>gi|149928498|ref|ZP_01916731.1| hypothetical protein LMED105_11710 [Limnobacter sp. MED105]
gi|149822777|gb|EDM82031.1| hypothetical protein LMED105_11710 [Limnobacter sp. MED105]
Length = 919
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 71/188 (37%), Gaps = 20/188 (10%)
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ + + S H+ R F+ Y + +L D A H+ G
Sbjct: 612 VGGSVAKAPDTSHVHY-------DRS-VFNWDYYYDKHPELV-AKQIDLVA---HWGQTG 659
Query: 431 VKEG-RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYL 487
R F Y A H D++ + PD + D + ++G GR FD
Sbjct: 660 YPAKWRGSLEFDMAFY-AKHPDVVKMWGTNPDAYALVLD-WVSWGYSRGRQGSADFDVTS 717
Query: 488 YLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRN--PDAFKALEYIASHEDLINAFADAP 544
YL Y DL+ FG++ AA H++ HG EGR+ P AF S A +
Sbjct: 718 YLARYPDLQRAFGANNYEAAFIHWLDHGKAEGRDGSPGAFAQTPPAGSVRVGGGGSAWSD 777
Query: 545 DLVQAGKD 552
D+V G+
Sbjct: 778 DVVCKGQH 785
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 57/170 (33%), Gaps = 18/170 (10%)
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + H+ +D Y + +L D A
Sbjct: 606 NAVVSAVGGSVAKAPDTSHVHYDRS------VFNWD--YYYDKHPELV-AKQIDLVA--- 653
Query: 509 HYITHGV-KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SI 565
H+ G + R F Y A H D++ + PD D + ++GY GR S
Sbjct: 654 HWGQTGYPAKWRGSLEFDMAFY-AKHPDVVKMWGTNPDAYALVLD-WVSWGYSRGRQGSA 711
Query: 566 TFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALGISGMQFKS 614
F+ YL Y DL FG++ AA H++ HG EGR
Sbjct: 712 DFDVTSYLARYPDLQRAFGANNYEAAFIHWLDHGKAEGRDGSPGAFAQTP 761
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 362 LEYTASYEDLIQVIGQDVFE--SMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGS 417
+ + A + D++++ G + + + +G S GR FD YL Y DL+ FG+
Sbjct: 672 MAFYAKHPDVVKMWGTNPDAYALVLDWVSWGYSRGRQGSADFDVTSYLARYPDLQRAFGA 731
Query: 418 -DRGAAARHYITHGVKEGRN--PDAF 440
+ AA H++ HG EGR+ P AF
Sbjct: 732 NNYEAAFIHWLDHGKAEGRDGSPGAF 757
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 13/104 (12%)
Query: 299 DGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G +G + + + Y + DA D++S
Sbjct: 655 WGQTGYPAKWRGSLEFDMAFYAKHPDVVKMWGTNPDAYALVLDWVSW-------GYSRGR 707
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGRD 396
+ Y A Y DL + G + +E+ H+ + G +EGRD
Sbjct: 708 QGSADFDVTSYLARYPDLQRAFGANNYEAAFIHWLDHGKAEGRD 751
>gi|326929890|ref|XP_003211086.1| PREDICTED: stromelysin-3-like [Meleagris gallopavo]
Length = 453
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 63/197 (31%), Gaps = 48/197 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + YK + + + AL WS V LTF E
Sbjct: 66 VLSGGRWDKTDLTYKIIRFPWQLVKTKV-------RRTIEEALKVWSDVTPLTFTEVQEG 118
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G GT L
Sbjct: 119 RADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGNNLGTDLLQ 178
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + S+MS F F Y +
Sbjct: 179 VAAHEFGHVLGLQHT-------------------TVSKSLMSPF--------YIFRYPLS 211
Query: 183 PMVSDIVAVQKIYGAPK 199
D +Q +YG PK
Sbjct: 212 LSEDDKQGIQYLYGKPK 228
>gi|109094826|ref|XP_001083910.1| PREDICTED: stromelysin-3 [Macaca mulatta]
Length = 488
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 69/204 (33%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + ++ AL WS V LTF E
Sbjct: 99 VLSGGRWEKTDLTYRILRFPWQL-------VQEQVRQTMAEALKVWSDVTPLTFTEVHEG 151
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
H+DI + + +D + +++FD + W G +GT L
Sbjct: 152 HADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQ 211
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 212 VAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYPLS 244
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D +Q +YG P+ ++ +
Sbjct: 245 LSPDDRRGIQHLYGQPRPTVTSRT 268
>gi|291537156|emb|CBL10268.1| Uncharacterized vancomycin resistance protein [Roseburia
intestinalis M50/1]
Length = 293
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
S Y ++Y D+ G + HF +GL EGR + F+ Y Y D
Sbjct: 37 SAYQAVFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYAD 96
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRN 436
L+ FG D A RHY+T G EGR+
Sbjct: 97 LQQAFGDDMAAYCRHYVTCGKAEGRD 122
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y +++ D+ AF + A +HF N+G EGRS + FNP Y Y DL
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISG 609
FG D +A +HY+T G EGR G +G
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRDGGGTG 127
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F A Y +++ D+ AF + +HF N+G EGR + F+ Y Y DL+
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 498 VFGSDRGAAARHYITHGVKEGRN 520
FG D A RHY+T G EGR+
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRD 122
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 42 VFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAF 101
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR 479
D + H+ G EGR
Sbjct: 102 GDD---MAAYCRHYVTCGKAEGR 121
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL A
Sbjct: 41 AVFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQA 100
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
F D + A H+ G EGR
Sbjct: 101 FGDD---MAAYCRHYVTCGKAEGR 121
>gi|85714737|ref|ZP_01045724.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85698622|gb|EAQ36492.1| possible protease [Nitrobacter sp. Nb-311A]
Length = 164
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 23/160 (14%)
Query: 23 WSNYFIRYKPDVLTTHRLSF--------DITELNPNAQEVARWALGEWSKVVDLT---FE 71
W+ + Y ++ S + LN Q+ R ALG +S V +L
Sbjct: 3 WATANLTYSFPTSASYYGSGYGIGEPSDNFETLNNQQQDAVRIALGMFSSVANLNYLELT 62
Query: 72 ETS-IHSDIKFISSNN---GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
ET+ H+D++F S+ + P + F+ + + +G +HE
Sbjct: 63 ETAVQHADLRFALSDAPSTAWAYLPHPAPEGGGDAWFNNSSGYYSAPVRGNYAHFTIIHE 122
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
IGHA GL H DS +VMSY
Sbjct: 123 IGHAHGLDHAHEDPAVPVS--------RDSIEYTVMSYRS 154
>gi|328724695|ref|XP_003248224.1| PREDICTED: matrix metalloproteinase-16-like isoform 3
[Acyrthosiphon pisum]
Length = 583
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 59/337 (17%), Positives = 97/337 (28%), Gaps = 82/337 (24%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T R + L+ W + YK R A WS V L
Sbjct: 104 TDSRSRRYALQGSRWRVKDLTYKISKYPKLLGK-------SETDSEIRKAFDVWSDVTPL 156
Query: 69 TFE---ETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGK 116
TF +H +I+F +G + Y + +FD ++ W G K
Sbjct: 157 TFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFPVYGGDAHFDDSEKWSIGSFK 216
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMD 174
GT L A HE GH+LGL H + + G + + DS
Sbjct: 217 GTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYNPSFNLDS----------------- 259
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN--------------------IYKIEVQQK 214
D+ A+Q +YGA +N + +
Sbjct: 260 -----------DDVEAIQALYGASTSGESDNDDDSTSQGSGKKTTTQEPPGTEGSDAELC 308
Query: 215 DSPFIQTIYDSGGDDLL--------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++S + LT G + + +WS G N+ A
Sbjct: 309 TDTKVNALFNSAAGETFVFKGDYYWKLTDDGLAQGFPKSIAGTWS---GLPGNIDAAF-- 363
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ + + D+ DG +G
Sbjct: 364 TYKNGKTYFFKGTKYWKYTDTTMDDGYPKDISDGFAG 400
>gi|296236895|ref|XP_002807973.1| PREDICTED: LOW QUALITY PROTEIN: stromelysin-3-like [Callithrix
jacchus]
Length = 591
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 68/204 (33%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L +W + Y+ + ++ AL WS V LTF E
Sbjct: 202 VLSGGHWEKTDLTYRILRFPWQL-------VQEQVRQTMAEALRVWSDVTPLTFTEVHEG 254
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
H+DI + + +D + +++FD + W G +GT L
Sbjct: 255 HADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQ 314
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H +MS F +F Y +
Sbjct: 315 VAAHEFGHVLGLQHTKEAKA-------------------LMSAF--------YTFRYPLS 347
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D +Q +YG P+ ++ +
Sbjct: 348 LSPDDRRGIQHLYGQPRPTVSSRT 371
>gi|162148075|ref|YP_001602536.1| glycosyl transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786652|emb|CAP56235.1| putative glycosyl transferase [Gluconacetobacter diazotrophicus PAl
5]
Length = 1075
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 82/249 (32%), Gaps = 47/249 (18%)
Query: 399 FDSYLYLGSYDDLRN---VFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLIN 454
FD Y +Y + G D A + G+ G +P+ F Y +H D+
Sbjct: 126 FDPDWYRAAYPFVAEQMVFLGCDDVVAY--FRDFGIGLGHSPNPFFDEAWYRTAHPDIAR 183
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDL--RNVFGSDRGAAARHY 510
AD +VQ G H+ G R + DS LY ++ DL + HY
Sbjct: 184 LIADG--VVQNGFVHYLTTGFA-DRSPHWLFDSGLYRRAHPDLSPEGLAIRGYRNLYDHY 240
Query: 511 ITHGVKEG-------------RNPDA--------------FKALEYIASHEDLINAFADA 543
+ G G R A F A+ Y+ ++ ++ A
Sbjct: 241 LEVGDPSGLRGQWLFDPSGRFRQVAASLPHVAPTLSLSPCFDAIWYLKTYPEVAALIAAG 300
Query: 544 PDLVQAGKDHFSNFGYEEGR---SITFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGM 599
H+ R + F+ D Y Y+D+ + + +H++ G+
Sbjct: 301 --AYSCALHHYLAN-PTPTRFCATPWFSEDYYRVFYEDVDSALRNGTFRTGYEHFLEFGL 357
Query: 600 KEGRALGIS 608
+E R
Sbjct: 358 REWRRPHPD 366
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 90/257 (35%), Gaps = 55/257 (21%)
Query: 364 YTASYEDLI-QVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR- 419
Y A+Y + Q++ + + +F +FG+ G FD Y ++ D+ +
Sbjct: 131 YRAAYPFVAEQMVFLGCDDVVAYFRDFGIGLGHSPNPFFDEAWYRTAHPDIARLIADGVV 190
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
HY+T G R+P F + Y +H DL A + DH+ G G
Sbjct: 191 QNGFVHYLTTGFA-DRSPHWLFDSGLYRRAHPDLS-PEGLAIRGYRNLYDHYLEVGDPSG 248
Query: 479 R----------------------------FVTFDSYLYLGSYDDLRNVFGSDRGA-AARH 509
FD+ YL +Y ++ + + + A H
Sbjct: 249 LRGQWLFDPSGRFRQVAASLPHVAPTLSLSPCFDAIWYLKTYPEVAALIAAGAYSCALHH 308
Query: 510 YITHGVKEGRNPDA--------FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
Y+ NP F Y +ED+ +A + + G +HF FG E
Sbjct: 309 YLA-------NPTPTRFCATPWFSEDYYRVFYEDVDSALRNGT--FRTGYEHFLEFGLRE 359
Query: 562 GRSITFNPDLYLTSYDD 578
R PD+ L ++ D
Sbjct: 360 WRRPH--PDVDLRAFRD 374
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 482 TFDSYLYLGSYDDLRNV---FGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLI 537
FD Y +Y + G D A + G+ G +P+ F Y +H D+
Sbjct: 125 RFDPDWYRAAYPFVAEQMVFLGCDDVVAY--FRDFGIGLGHSPNPFFDEAWYRTAHPDIA 182
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGS--DRSAAAQH 593
AD +VQ G H+ G+ RS F+ LY ++ DL + H
Sbjct: 183 RLIADG--VVQNGFVHYLTTGFA-DRSPHWLFDSGLYRRAHPDLSPEGLAIRGYRNLYDH 239
Query: 594 YITHG 598
Y+ G
Sbjct: 240 YLEVG 244
>gi|297708400|ref|XP_002830961.1| PREDICTED: stromelysin-3-like, partial [Pongo abelii]
Length = 452
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 68/204 (33%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + Q++ AL WS V LTF E
Sbjct: 63 VLSGGRWEKTDLTYRILRFPWQL-------VQEQVQQMMAEALKVWSDVTPLTFTEVHEG 115
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 116 RADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQ 175
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 176 VAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYPLS 208
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D +Q +YG P ++ +
Sbjct: 209 LSPDDRRGIQHLYGQPWPTVTSRT 232
>gi|170051326|ref|XP_001861713.1| matrix metalloproteinase [Culex quinquefasciatus]
gi|167872650|gb|EDS36033.1| matrix metalloproteinase [Culex quinquefasciatus]
Length = 536
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 27/167 (16%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T R + L+ W + Y+ ++ +E+A+ A WS+ DL
Sbjct: 91 TDSRSKRYALQGSRWKVKALTYRISKYPARLDRLEV------EKEIAK-AFSVWSEYTDL 143
Query: 69 TFE---ETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGK 116
TF +H DI+F + +G Y Y + +FD A+ W G +
Sbjct: 144 TFTPKKSAPVHIDIRFEVNEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEFWTIGKSR 203
Query: 117 GTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYEN 155
GT L A HE GH+LGL H Y G PV+ +D+D
Sbjct: 204 GTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFRLDSDDVQ 250
>gi|209542689|ref|YP_002274918.1| glycosyl transferase family 2 [Gluconacetobacter diazotrophicus PAl
5]
gi|209530366|gb|ACI50303.1| glycosyl transferase family 2 [Gluconacetobacter diazotrophicus PAl
5]
Length = 1075
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 82/249 (32%), Gaps = 47/249 (18%)
Query: 399 FDSYLYLGSYDDLRN---VFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLIN 454
FD Y +Y + G D A + G+ G +P+ F Y +H D+
Sbjct: 126 FDPDWYRAAYPFVAEQMVFLGCDDVVAY--FRDFGIGLGHSPNPFFDEAWYRTAHPDIAR 183
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDL--RNVFGSDRGAAARHY 510
AD +VQ G H+ G R + DS LY ++ DL + HY
Sbjct: 184 LIADG--VVQNGFVHYLTTGFA-DRSPHWLFDSGLYRRAHPDLSPEGLAIRGYRNLYDHY 240
Query: 511 ITHGVKEG-------------RNPDA--------------FKALEYIASHEDLINAFADA 543
+ G G R A F A+ Y+ ++ ++ A
Sbjct: 241 LEVGDPSGLRGQWLFDPSGRFRQVAASLPHVAPTLSLSPCFDAIWYLKTYPEVAALIAAG 300
Query: 544 PDLVQAGKDHFSNFGYEEGR---SITFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGM 599
H+ R + F+ D Y Y+D+ + + +H++ G+
Sbjct: 301 --AYSCALHHYLAN-PTPTRFCATPWFSEDYYRVFYEDVDSALRNGTFRTGYEHFLEFGL 357
Query: 600 KEGRALGIS 608
+E R
Sbjct: 358 REWRRPHPD 366
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 90/257 (35%), Gaps = 55/257 (21%)
Query: 364 YTASYEDLI-QVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR- 419
Y A+Y + Q++ + + +F +FG+ G FD Y ++ D+ +
Sbjct: 131 YRAAYPFVAEQMVFLGCDDVVAYFRDFGIGLGHSPNPFFDEAWYRTAHPDIARLIADGVV 190
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
HY+T G R+P F + Y +H DL A + DH+ G G
Sbjct: 191 QNGFVHYLTTGFA-DRSPHWLFDSGLYRRAHPDLS-PEGLAIRGYRNLYDHYLEVGDPSG 248
Query: 479 R----------------------------FVTFDSYLYLGSYDDLRNVFGSDRGA-AARH 509
FD+ YL +Y ++ + + + A H
Sbjct: 249 LRGQWLFDPSGRFRQVAASLPHVAPTLSLSPCFDAIWYLKTYPEVAALIAAGAYSCALHH 308
Query: 510 YITHGVKEGRNPDA--------FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
Y+ NP F Y +ED+ +A + + G +HF FG E
Sbjct: 309 YLA-------NPTPTRFCATPWFSEDYYRVFYEDVDSALRNGT--FRTGYEHFLEFGLRE 359
Query: 562 GRSITFNPDLYLTSYDD 578
R PD+ L ++ D
Sbjct: 360 WRRPH--PDVDLRAFRD 374
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 482 TFDSYLYLGSYDDLRNV---FGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLI 537
FD Y +Y + G D A + G+ G +P+ F Y +H D+
Sbjct: 125 RFDPDWYRAAYPFVAEQMVFLGCDDVVAY--FRDFGIGLGHSPNPFFDEAWYRTAHPDIA 182
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGS--DRSAAAQH 593
AD +VQ G H+ G+ RS F+ LY ++ DL + H
Sbjct: 183 RLIADG--VVQNGFVHYLTTGFA-DRSPHWLFDSGLYRRAHPDLSPEGLAIRGYRNLYDH 239
Query: 594 YITHG 598
Y+ G
Sbjct: 240 YLEVG 244
>gi|329114944|ref|ZP_08243700.1| Hypothetical protein APO_1748 [Acetobacter pomorum DM001]
gi|326695841|gb|EGE47526.1| Hypothetical protein APO_1748 [Acetobacter pomorum DM001]
Length = 174
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 388 EFGLSEGRD-ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEY 445
+ E R I FDS YL +Y D+R G D H++ +G KEGRNP+A F +L Y
Sbjct: 89 QEAEKERRAAIFFDSQWYLNAYPDIREA-GVD---PLEHFLDYGAKEGRNPNALFDSLSY 144
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + D+ F P H+ +G +EGR
Sbjct: 145 LRVNPDV-AGFGPGP------FIHYICYGFQEGR 171
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 476 EEGRFV-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH 533
+E R FDS YL +Y D+R G D H++ +G KEGRNP+A F +L Y+ +
Sbjct: 93 KERRAAIFFDSQWYLNAYPDIREA-GVD---PLEHFLDYGAKEGRNPNALFDSLSYLRVN 148
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
D+ F P + H+ +G++EGR +
Sbjct: 149 PDVA-GFGPGPFI------HYICYGFQEGRPLR 174
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYL 573
KE R F + Y+ ++ D+ A D +HF ++G +EGR+ F+ YL
Sbjct: 93 KERRAAIFFDSQWYLNAYPDIREAGVDP-------LEHFLDYGAKEGRNPNALFDSLSYL 145
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
D+ HYI +G +EGR L
Sbjct: 146 RVNPDVAGF----GPGPFIHYICYGFQEGRPL 173
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
KE R F + Y+ ++ D+ A D +HF ++G +EGR FDS YL
Sbjct: 93 KERRAAIFFDSQWYLNAYPDIREAGVDP-------LEHFLDYGAKEGRNPNALFDSLSYL 145
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
D+ G G HYI +G +EGR
Sbjct: 146 RVNPDVA---GFGPG-PFIHYICYGFQEGR 171
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D+ + + ++HF ++G EGR+ FDS YL D+
Sbjct: 106 YLNAYPDIREA----GVDPLEHFLDYGAKEGRNPNALFDSLSYLRVNPDVAGF----GPG 157
Query: 422 AARHYITHGVKEGR 435
HYI +G +EGR
Sbjct: 158 PFIHYICYGFQEGR 171
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 12/89 (13%)
Query: 560 EEGRS-ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
+E R+ I F+ YL +Y D+ +H++ +G KEGR F S+ L
Sbjct: 93 KERRAAIFFDSQWYLNAYPDIREA----GVDPLEHFLDYGAKEGRN---PNALFDSLSYL 145
Query: 619 SEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
R D++ + F +G
Sbjct: 146 ----RVNPDVAGFGPGPFIHYICYGFQEG 170
>gi|258541342|ref|YP_003186775.1| hypothetical protein APA01_02430 [Acetobacter pasteurianus IFO
3283-01]
gi|256632420|dbj|BAH98395.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635477|dbj|BAI01446.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638532|dbj|BAI04494.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641586|dbj|BAI07541.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256644641|dbj|BAI10589.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256647696|dbj|BAI13637.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256650749|dbj|BAI16683.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653740|dbj|BAI19667.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 159
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 388 EFGLSEGRD-ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEY 445
+ E R I FDS YL +Y D+R G D H++ +G KEGRNP+A F +L Y
Sbjct: 74 QEAEKERRAAIFFDSQWYLNAYPDIREA-GVD---PLEHFLDYGAKEGRNPNALFDSLSY 129
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + D+ F P H+ +G +EGR
Sbjct: 130 LRVNPDV-AGFGPGP------FIHYICYGFQEGR 156
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDLRNVFGSDRGAAAR 508
A +Q +E R FDS YL +Y D+R G D
Sbjct: 52 PTQAPAAEQIALALQSQAGIVEQEAEKERRAAIFFDSQWYLNAYPDIREA-GVD---PLE 107
Query: 509 HYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
H++ +G KEGRNP+A F +L Y+ + D+ F P + H+ +G++EGR +
Sbjct: 108 HFLDYGAKEGRNPNALFDSLSYLRVNPDVA-GFGPGPFI------HYICYGFQEGRPLR 159
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYL 573
KE R F + Y+ ++ D+ A D +HF ++G +EGR+ F+ YL
Sbjct: 78 KERRAAIFFDSQWYLNAYPDIREAGVDP-------LEHFLDYGAKEGRNPNALFDSLSYL 130
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
D+ HYI +G +EGR L
Sbjct: 131 RVNPDVAGF----GPGPFIHYICYGFQEGRPL 158
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D+ + + ++HF ++G EGR+ FDS YL D+
Sbjct: 91 YLNAYPDIREA----GVDPLEHFLDYGAKEGRNPNALFDSLSYLRVNPDVAGF----GPG 142
Query: 422 AARHYITHGVKEGR 435
HYI +G +EGR
Sbjct: 143 PFIHYICYGFQEGR 156
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 12/89 (13%)
Query: 560 EEGRS-ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
+E R+ I F+ YL +Y D+ +H++ +G KEGR F S+ L
Sbjct: 78 KERRAAIFFDSQWYLNAYPDIREA----GVDPLEHFLDYGAKEGRN---PNALFDSLSYL 130
Query: 619 SEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
R D++ + F +G
Sbjct: 131 ----RVNPDVAGFGPGPFIHYICYGFQEG 155
>gi|288557361|ref|NP_001165700.1| matrix metalloproteinase-28 a [Xenopus laevis]
gi|122894094|gb|ABM67693.1| matrix metalloproteinase-28 [Xenopus laevis]
Length = 496
Score = 87.9 bits (216), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 74/204 (36%), Gaps = 53/204 (25%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEET- 73
++ + + W + Y+ + L+ + ++ + A WS V LTF E
Sbjct: 110 YISKSKKWYKQHLTYQIVNWPWY--------LSQHQVRQAVKAAFQLWSNVSSLTFSEAL 161
Query: 74 SIHSDIKFISSN--------NGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILS 121
+DI+ + N + + F E +FD A+ W GKG L
Sbjct: 162 RDPADIRLAFFDGDHNDGAGNAFDGPGGALAHAFFPRRGEAHFDSAEHWSLN-GKGRNLF 220
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYC 180
HEIGH LGL H N +MS Y+ + D +
Sbjct: 221 VVLAHEIGHTLGLPHSSFKNA-------------------LMSPYYKKLN--KDYVLNF- 258
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGN 204
D++A+Q +YGAP GN
Sbjct: 259 -----DDVLAIQNLYGAP--PSGN 275
>gi|47213300|emb|CAF96568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 560
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 59/209 (28%), Gaps = 57/209 (27%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
W + YK Q V + A G WS V L F E S +D
Sbjct: 178 GGRWEKTDLTYKILRFPWQMSE-------AKVQHVLQEAFGVWSAVSPLRFREVTSDQAD 230
Query: 79 IKFISSNNGYVCTPRYDSRYF-------------------MEINFDKADVWRYGIGKGTI 119
I ++ G + Y E++FD + W G G
Sbjct: 231 IIIDFNSCGSWAGTGMATAYPSTALAGILAHAFFPRTHRQGEVHFDYDEHWTVGNDLGMD 290
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
L A HE GH LGL H VMS F S Y
Sbjct: 291 LLQVAAHEFGHVLGLQHSLEPGA-------------------VMSPF--------YSESY 323
Query: 180 CATPMVSDIVAVQKIYGAPKG---SLGNN 205
D+ +Q +YG P G+
Sbjct: 324 PPRLSQDDVRGIQYLYGPPLTVPPQTGDT 352
>gi|301762074|ref|XP_002916480.1| PREDICTED: matrix metalloproteinase-24-like [Ailuropoda
melanoleuca]
Length = 630
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 141 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 193
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 194 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 253
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 254 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 294
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 295 HNFKL-----PQ-DDLQGIQKIYGPP 314
>gi|296199747|ref|XP_002747296.1| PREDICTED: matrix metalloproteinase-24 [Callithrix jacchus]
Length = 595
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 106 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 158
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 159 HEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 218
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 219 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 259
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 260 HNFKL-----PQ-DDLQGIQKIYGPP 279
>gi|184185552|gb|ACC68950.1| matrix metalloproteinase 24 preproprotein (predicted) [Rhinolophus
ferrumequinum]
Length = 547
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 58 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 110
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 111 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 170
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 171 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 211
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 212 HNFKL-----PQ-DDLQGIQKIYGPP 231
>gi|169731509|gb|ACA64881.1| matrix metalloproteinase 24 preproprotein (predicted) [Callicebus
moloch]
Length = 595
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 106 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 158
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 159 HEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 218
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 219 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 259
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 260 HNFKL-----PQ-DDLQGIQKIYGPP 279
>gi|281182734|ref|NP_001162479.1| matrix metalloproteinase-24 [Papio anubis]
gi|297259948|ref|XP_001100890.2| PREDICTED: matrix metalloproteinase-24 [Macaca mulatta]
gi|164623742|gb|ABY64668.1| matrix metallopeptidase 24 (predicted) [Papio anubis]
Length = 598
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 109 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 161
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 162 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 221
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 222 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 262
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 263 HNFKL-----PQ-DDLQGIQKIYGPP 282
>gi|149733599|ref|XP_001499275.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
(predicted) [Equus caballus]
Length = 666
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 177 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 229
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 230 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 289
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 290 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 330
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 331 HNFKL-----PQ-DDLQGIQKIYGPP 350
>gi|297481953|ref|XP_002692352.1| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
taurus]
gi|296481308|gb|DAA23423.1| matrix metallopeptidase 24 (membrane-inserted) [Bos taurus]
Length = 596
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 107 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 159
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 160 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 219
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 220 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 260
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 261 HNFKL-----PQ-DDLQGIQKIYGPP 280
>gi|217038328|gb|ACJ76621.1| matrix metalloproteinase 24 preproprotein (predicted) [Oryctolagus
cuniculus]
Length = 532
Score = 87.5 bits (215), Expect = 7e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 43 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 95
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 96 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 155
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 156 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 196
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 197 HNFKL-----PQ-DDLQGIQKIYGPP 216
>gi|119596628|gb|EAW76222.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
Length = 532
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 43 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 95
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 96 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 155
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 156 ANHDGNDLFLVAVHELGHALGLEHSSDPSA-------------------IMAPFYQYMET 196
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 197 HNFKL-----PQ-DDLQGIQKIYGPP 216
>gi|301608600|ref|XP_002933877.1| PREDICTED: matrix metalloproteinase-28-like [Xenopus (Silurana)
tropicalis]
Length = 497
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 74/204 (36%), Gaps = 53/204 (25%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEET- 73
++ + + W + Y+ + L+ + ++ + A WS V LTF E
Sbjct: 108 YISKSKKWYKQHLTYQIVNWPWY--------LSQHQVRQAVKAAFQLWSNVSSLTFSEAL 159
Query: 74 SIHSDIKFIS--------SNNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILS 121
+DI+ + N + + F E +FD A+ W GKG L
Sbjct: 160 RDPADIRLAFFHGDHNDGAGNAFDGPGGALAHAFFPRRGEAHFDSAEHWSLN-GKGQNLF 218
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYC 180
HEIGH LGL H N +MS Y+ + D +
Sbjct: 219 VVLAHEIGHTLGLQHSPFKNA-------------------LMSPYYKKLN--KDYVLNF- 256
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGN 204
D++A+Q +YGAP GN
Sbjct: 257 -----DDVLAIQNLYGAP--PSGN 273
>gi|73992282|ref|XP_542973.2| PREDICTED: similar to Matrix metalloproteinase-24 precursor
(MMP-24) (Membrane-type matrix metalloproteinase 5)
(MT-MMP 5) (Membrane-type-5 matrix metalloproteinase)
(MT5-MMP) [Canis familiaris]
Length = 626
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 137 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 189
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 190 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 249
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 250 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 290
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 291 HNFKL-----PQ-DDLQGIQKIYGPP 310
>gi|17230838|ref|NP_487386.1| hypothetical protein all3346 [Nostoc sp. PCC 7120]
gi|17132441|dbj|BAB75045.1| all3346 [Nostoc sp. PCC 7120]
Length = 1428
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 69/180 (38%), Gaps = 10/180 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ Y T +GG D +D ++L + ++ K
Sbjct: 1195 SGGAGNDTYAFVANAALGTDTITETATGGIDTIDFNGSTAT-VRVNLGVTTSQTVNNNLK 1253
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++ + VIE+ G +GND + GN+ NN+ +GND G +G DT + +
Sbjct: 1254 -LILSANNVIENATGGTGNDRLTGNALNNILAGGNGNDQLQGLAGNDTLWGGLGDDILTG 1312
Query: 319 YRFENAIIVYD----ANEHKQDFLS----DVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ + ++ D++S +++ + ++V L A D
Sbjct: 1313 GIGQDKYLFQSSGVFSSSLGVDYISQFDVGQDQIVLSKATFNAVTNSAGQALTDFAVVSD 1372
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+LL + N ++LN I G + +++ G GNDV+ G ++
Sbjct: 671 NLLQASDFIFNTNTVNLNQT----IDGTNSPDQLFGGLGNDTLRGFFGNDVLFGEQGDDR 726
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRF 346
F +GND F G +G D Y Y++ V D AN D L +VE+++F
Sbjct: 727 FEGGAGNDTFYGGTGNDIAVYLGTRSQYQVTSNGGVFTVTDTVANRDGVDTLREVEQIQF 786
Query: 347 ADQCIDSVNVKQR 359
+DQ I N
Sbjct: 787 SDQTITIGNTSPT 799
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 74/200 (37%), Gaps = 15/200 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYI-------DLNTESWSSIGGYEKNMT 261
+ D +Q + + G D L T G ++ I +L S N T
Sbjct: 212 NLNINDWATLQLLISNDGQDNALITTFFNGSQSQIKLLNINPNLLQASDFIFNTVNLNQT 271
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G GND + G N+V F G+D F+G G DTF+ A + ++ + +
Sbjct: 272 IDGTNFADQLFGGLGNDTLRGFFGNDVLFGEQGDDRFEGGRGNDTFYGGAGNDVFNLEQL 331
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ +V DF+ +++ + I+ Q I + + D +
Sbjct: 332 QDNDVV-------TDFVRGQDKIDLRNLNINDWATLQLLISNDGQNNALITTFFNGDQSQ 384
Query: 382 SMKHFYEFGLSEGRDITFDS 401
L + D F++
Sbjct: 385 IKLLNINPNLLQASDFIFNT 404
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 73/200 (36%), Gaps = 15/200 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYI-------DLNTESWSSIGGYEKNMT 261
+ D +Q + + G D L T G ++ I +L S N T
Sbjct: 73 NLNINDWATLQLLISNDGQDNALITTFFNGSQSQIKLLNINPNLLQASDFIFNTVNLNQT 132
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G GND + G + N+V F G+D F+G G DTF+ A + ++ + +
Sbjct: 133 IDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGNDTFYGGAGNDVFNLEQQ 192
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ +V DF+ +++ + I+ Q I + +
Sbjct: 193 QDNDVV-------TDFVRGQDKIDLRNLNINDWATLQLLISNDGQDNALITTFFNGSQSQ 245
Query: 382 SMKHFYEFGLSEGRDITFDS 401
L + D F++
Sbjct: 246 IKLLNINPNLLQASDFIFNT 265
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 14/187 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYI-------DLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I + G ++ L T G ++ I +L S N TI + + G
Sbjct: 364 ISNDGQNNALITTFFNGDQSQIKLLNINPNLLQASDFIFNTVNLNQTIDGTNSPDQLFGG 423
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND + G N+V F G+D F+G G DTF+ A + ++ + + ++ +V
Sbjct: 424 LGNDTLRGFFGNDVLFGEQGDDRFEGGRGNDTFYGGAGNDVFNLEQLQDNDVV------- 476
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
DF+ +++ + I+ Q I + D + L +
Sbjct: 477 TDFVQGQDKIDIRNLNINDWATLQLLISNDGQDNALITTFFNGDQSQIKLLNINPNLLQA 536
Query: 395 RDITFDS 401
D F++
Sbjct: 537 SDFIFNT 543
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 13/185 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYI-------DLNTESWSSIGGYEKNMT 261
+ D +Q + + G D L T G ++ I +L S N T
Sbjct: 490 NLNINDWATLQLLISNDGQDNALITTFFNGDQSQIKLLNINPNLLQASDFIFNTVNLNQT 549
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G GND + G N+V F G+D F+G G DTF+ A + ++ + +
Sbjct: 550 IDGTNSPDQLFGGLGNDTLRGFFGNDVLFGEQGDDRFEGGRGNDTFYGGAGNDVFNLEQL 609
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---NVKQRSILEYTASYEDLIQVIGQD 378
++ +V D QD + D+ L +D + N Q + L T D Q+ +
Sbjct: 610 QDNDVVID-FVQGQDKI-DIRSLNISDWATLQLLISNDGQNNALITTFFNGDQSQIKLNN 667
Query: 379 VFESM 383
+ ++
Sbjct: 668 INPNL 672
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
++++G++GND++ G N+ F GND G +G D F + F
Sbjct: 10 DNLIGTTGNDIIEGLGGNDRFEGGRGNDTLTGGTGNDVFNLEQQQDNDVVTDF 62
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G++ +D +IG + N++ GND F+G G DT + ++ + + ++ +V
Sbjct: 3 IRGTNNDDNLIGTTGNDIIEGLGGNDRFEGGRGNDTLTGGTGNDVFNLEQQQDNDVV--- 59
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
DF+ +++ + I+ Q I + +
Sbjct: 60 ----TDFVRGQDKIDLRNLNINDWATLQLLISNDGQDNALITTFFNGSQSQIKLLNINPN 115
Query: 391 LSEGRDITFDS 401
L + D F++
Sbjct: 116 LLQASDFIFNT 126
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I G + + T + + G GND G N+ +GNDVF+
Sbjct: 3 IRGTNNDDNLIGTTGNDIIEGLGGNDRFEGGRGNDTLTGGTGNDVFN 49
>gi|224077434|ref|XP_002187137.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
(predicted) [Taeniopygia guttata]
Length = 596
Score = 87.1 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 64/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D + R A W +V LTFEE
Sbjct: 107 YALTGQKWRQRHITYSVHNYTPKVGEIDT-------RRAIRQAFDVWQRVTPLTFEEVPY 159
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 160 HEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 219
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 220 SNHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 260
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 261 HNFKL-----PQ-DDLQGIQKIYGPP 280
>gi|297458750|ref|XP_616761.4| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
taurus]
Length = 568
Score = 87.1 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 79 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 131
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 132 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 191
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 192 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 232
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 233 HNFKL-----PQ-DDLQGIQKIYGPP 252
>gi|291388662|ref|XP_002710873.1| PREDICTED: matrix metalloproteinase 24 [Oryctolagus cuniculus]
Length = 574
Score = 87.1 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 85 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 137
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 138 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 197
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 198 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 238
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 239 HNFKL-----PQ-DDLQGIQKIYGPP 258
>gi|114685393|ref|XP_515022.2| PREDICTED: stromelysin-3 [Pan troglodytes]
Length = 469
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 67/204 (32%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + Y+ + ++ AL WS V LTF E
Sbjct: 80 VLSGGRWEKTDLTYRILRFPWQL-------VQEQVRQTMAEALKVWSDVTPLTFTEVHEG 132
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 133 RADIVIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQ 192
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 193 VAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYPLS 225
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D VQ +YG P ++ +
Sbjct: 226 LSPDDRRGVQHLYGQPWPTVTSRT 249
>gi|332265536|ref|XP_003281775.1| PREDICTED: stromelysin-3 isoform 1 [Nomascus leucogenys]
Length = 493
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 67/204 (32%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + Y+ + ++ AL WS V LTF E
Sbjct: 99 VLSGGRWEKTDLTYRILRFPWQL-------VQEQVRQTMAEALKVWSDVTPLTFTEVHEG 151
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 152 RADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQ 211
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 212 VAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYPLS 244
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D +Q +YG P ++ +
Sbjct: 245 LSPDDHRGIQHLYGQPWPTVTSRT 268
>gi|83375894|gb|ABC17785.1| matrix metalloproteinase 24 variant [Homo sapiens]
Length = 593
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 104 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 156
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 157 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 216
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 217 ANHDGNDLFLVAVHELGHALGLEHSSDPSA-------------------IMAPFYQHMET 257
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 258 HNFKL-----PQ-DDLQGIQKIYGPP 277
>gi|328724693|ref|XP_003248223.1| PREDICTED: matrix metalloproteinase-16-like isoform 2
[Acyrthosiphon pisum]
Length = 557
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/337 (17%), Positives = 97/337 (28%), Gaps = 82/337 (24%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T R + L+ W + YK R A WS V L
Sbjct: 104 TDSRSRRYALQGSRWRVKDLTYKISKYPKLLGK-------SETDSEIRKAFDVWSDVTPL 156
Query: 69 TFE---ETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGK 116
TF +H +I+F +G + Y + +FD ++ W G K
Sbjct: 157 TFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFPVYGGDAHFDDSEKWSIGSFK 216
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMD 174
GT L A HE GH+LGL H + + G + + DS
Sbjct: 217 GTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYNPSFNLDS----------------- 259
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN--------------------IYKIEVQQK 214
D+ A+Q +YGA +N + +
Sbjct: 260 -----------DDVEAIQALYGASTSGESDNDDDSTSQGSGKKTTTQEPPGTEGSDAELC 308
Query: 215 DSPFIQTIYDSGGDDLL--------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++S + LT G + + +WS G N+ A
Sbjct: 309 TDTKVNALFNSAAGETFVFKGDYYWKLTDDGLAQGFPKSIAGTWS---GLPGNIDAAF-- 363
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ + + D+ DG +G
Sbjct: 364 TYKNGKTYFFKGTKYWKYTDTTMDDGYPKDISDGFAG 400
>gi|296446630|ref|ZP_06888571.1| glycosyl transferase group 1 [Methylosinus trichosporium OB3b]
gi|296255858|gb|EFH02944.1| glycosyl transferase group 1 [Methylosinus trichosporium OB3b]
Length = 1371
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 94/287 (32%), Gaps = 57/287 (19%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFA 457
FD+ YL +Y D++N G D H++ HG +EGRNP +F L Y +
Sbjct: 19 FDAQYYLNAYPDVKNA-GMD---PFIHFVNHGWREGRNPSSSFHTLFYKDRN-------- 66
Query: 458 DAPDLVQVGKDHFSNFG-CEEGRFVT-----------------FDSYLYLGSYDDLRNVF 499
L + H+S E R FD Y Y
Sbjct: 67 LGGRLSENPLTHYSQHKDDGELRKFPESEQELVEVQRRVIEPEFDPSYYSKRYS------ 120
Query: 500 GSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA----FADAPDLVQAGKDHF 554
A HY+T G ++G P+ AF EY+ +H + A F G
Sbjct: 121 -VPIDTALEHYLTVGWRKGFEPNRAFSTSEYLRAHPHIAAANVSPFYHFVTTRDKGAASA 179
Query: 555 SNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
S T Y ++L G++ SA G R G +F
Sbjct: 180 EAAESRTAPSSTQLGRAYEGRLEELV--VGNELSAVT------GWALDRKTGTFPSRFDI 231
Query: 615 VMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDIN 661
R + D L + DL GDGN + + DI+
Sbjct: 232 YY-----DRKRIDCRLVRSSRD-DLVKARKGDGNCAFTAYVRLPDID 272
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 71/275 (25%), Gaps = 63/275 (22%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFG 416
Y +Y D+ + HF G EGR+ +F + Y + G
Sbjct: 19 FDAQYYLNAYPDVKNA----GMDPFIHFVNHGWREGRNPSSSFHTLFYKDRN-----LGG 69
Query: 417 SDRGAAARHYITH---GVKEGRNP----------------DAFKALEYIASHEDLINAFA 457
HY H G E R F Y +
Sbjct: 70 RLSENPLTHYSQHKDDG--ELRKFPESEQELVEVQRRVIEPEFDPSYYSKRYS------- 120
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ +H+ G +G F + YL ++ + + H++T
Sbjct: 121 ---VPIDTALEHYLTVGWRKGFEPNRAFSTSEYLRAHPHIAAA----NVSPFYHFVTT-R 172
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR-----SITFNPD 570
+G S L A+ + + G + + G+ R F+
Sbjct: 173 DKGAASAEAAESRTAPSSTQLGRAYEGRLEELVVGNELSAVTGWALDRKTGTFPSRFDIY 232
Query: 571 LYLTSY---------DDLWNVFGSDRSAAAQHYIT 596
DDL D + A Y+
Sbjct: 233 YDRKRIDCRLVRSSRDDLVKARKGDGNCAFTAYVR 267
>gi|170743790|ref|YP_001772445.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
gi|168198064|gb|ACA20011.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
Length = 1271
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 82/231 (35%), Gaps = 39/231 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-----------------PDAFK 441
FD Y Y DL ++ G RG HY+ HG +EGR P F+
Sbjct: 4 FDENFYYTLYPDLHHLTG--RGELLEHYLRHGRREGRQSSVEGYLADLSAEHGPLPKDFR 61
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Y + DL + F + + H+ G EE R D ++ + G
Sbjct: 62 PSLYRDLNPDLASRFTEDWQFIA----HYLRHGREEKRPYALDIASDADAFARVAVRDGD 117
Query: 502 DRGA-AARHYI-THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
A A ++ HG+ G F +++ + D I P + G F G
Sbjct: 118 PEAADAFAAFLRQHGLVPGSWLLRFDLAQFVQLNADWI---GPPPRVRAEGLRLFVEQGI 174
Query: 560 EEGRSIT----FNPDLYLTSYD--DLWNVFGSDRSAAAQHYITHGMKEGRA 604
I F+P Y Y DL D ++ +H++ G++ G A
Sbjct: 175 ARLAPIHAEAMFDPAFYRAVYPVEDLP-----DDASLYRHWLCTGIERGFA 220
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/302 (19%), Positives = 91/302 (30%), Gaps = 53/302 (17%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----------------- 398
+ Y Y DL + G+ E ++H+ G EGR +
Sbjct: 1 MSDFDENFYYTLYPDLHHLTGRG--ELLEHYLRHGRREGRQSSVEGYLADLSAEHGPLPK 58
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
F LY DL + F D HY+ HG +E R P A + +
Sbjct: 59 DFRPSLYRDLNPDLASRFTEDWQ-FIAHYLRHGREEKR-PYALDIASDADAFARVAVRDG 116
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF-VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
D P+ G G + + FD ++ D R R ++ G+
Sbjct: 117 D-PEAADAFAAFLRQHGLVPGSWLLRFDLAQFVQLNADWIGPPPRVRAEGLRLFVEQGIA 175
Query: 517 EGRNPDA---FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT------- 566
A F Y A + D PD + H+ G E G +
Sbjct: 176 RLAPIHAEAMFDPAFYRAVYP-----VEDLPDDA-SLYRHWLCTGIERGFAPNESAHLAA 229
Query: 567 ----------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
F+ Y + L R+ +H++ G GR +SG + +
Sbjct: 230 LIGETVFPRCFDLAGYRAA---LPRGAALPRTQVLEHWLDFGFPAGRLDVVSGPDEAAFL 286
Query: 617 NL 618
L
Sbjct: 287 GL 288
>gi|5729929|ref|NP_006681.1| matrix metalloproteinase-24 preproprotein [Homo sapiens]
gi|332858203|ref|XP_003316927.1| PREDICTED: matrix metalloproteinase-24 [Pan troglodytes]
gi|12585280|sp|Q9Y5R2|MMP24_HUMAN RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|5381386|gb|AAD42962.1|AF131284_1 membrane type 5 matrix metalloproteinase [Homo sapiens]
gi|5689367|dbj|BAA82967.1| membrane-type-5 matrix metalloproteinase [Homo sapiens]
gi|220675561|emb|CAX12722.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
gi|225000844|gb|AAI72450.1| Matrix metallopeptidase 24 (membrane-inserted) [synthetic
construct]
Length = 645
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 156 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 208
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 209 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 268
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 269 ANHDGNDLFLVAVHELGHALGLEHSSDPSA-------------------IMAPFYQYMET 309
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 310 HNFKL-----PQ-DDLQGIQKIYGPP 329
>gi|281346053|gb|EFB21637.1| hypothetical protein PANDA_004527 [Ailuropoda melanoleuca]
Length = 564
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 75 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 127
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 128 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 187
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 188 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 228
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 229 HNFKL-----PQ-DDLQGIQKIYGPP 248
>gi|118100493|ref|XP_417326.2| PREDICTED: similar to MMP24 protein [Gallus gallus]
Length = 565
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 64/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D + R A W +V LTFEE
Sbjct: 76 YALTGQKWRQKHITYSVHNYTPKVGELDT-------RRAIRQAFDVWQRVTPLTFEEVPY 128
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 129 HEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 188
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 189 SNHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 229
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 230 HNFKL-----PQ-DDLQGIQKIYGPP 249
>gi|291540389|emb|CBL13500.1| Uncharacterized vancomycin resistance protein [Roseburia
intestinalis XB6B4]
Length = 289
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
S Y ++Y D+ G + HF +GL EGR + F+ Y Y D
Sbjct: 37 SAYQAVFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYAD 96
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRN 436
L+ FG D A RHY+T G EGR+
Sbjct: 97 LQQAFGDDMAAYCRHYVTCGKAEGRD 122
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y +++ D+ AF + A +HF N+G EGRS + FNP Y Y DL
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISG 609
FG D +A +HY+T G EGR G +G
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRDGGGTG 127
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F A Y +++ D+ AF + +HF N+G EGR + F+ Y Y DL+
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 498 VFGSDRGAAARHYITHGVKEGRN 520
FG D A RHY+T G EGR+
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRD 122
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ A F Y A + DL AF
Sbjct: 42 VFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAF 101
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
D + H+ G EGR + + V + +
Sbjct: 102 GDD---MAAYCRHYVTCGKAEGRDGGGTGSVSATTQTSAATVGQGNILS 147
>gi|328724691|ref|XP_001949484.2| PREDICTED: matrix metalloproteinase-16-like isoform 1
[Acyrthosiphon pisum]
Length = 547
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/337 (17%), Positives = 97/337 (28%), Gaps = 82/337 (24%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T R + L+ W + YK R A WS V L
Sbjct: 104 TDSRSRRYALQGSRWRVKDLTYKISKYPKLLGK-------SETDSEIRKAFDVWSDVTPL 156
Query: 69 TFE---ETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGK 116
TF +H +I+F +G + Y + +FD ++ W G K
Sbjct: 157 TFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFPVYGGDAHFDDSEKWSIGSFK 216
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMD 174
GT L A HE GH+LGL H + + G + + DS
Sbjct: 217 GTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYNPSFNLDS----------------- 259
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN--------------------IYKIEVQQK 214
D+ A+Q +YGA +N + +
Sbjct: 260 -----------DDVEAIQALYGASTSGESDNDDDSTSQGSGKKTTTQEPPGTEGSDAELC 308
Query: 215 DSPFIQTIYDSGGDDLL--------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++S + LT G + + +WS G N+ A
Sbjct: 309 TDTKVNALFNSAAGETFVFKGDYYWKLTDDGLAQGFPKSIAGTWS---GLPGNIDAAF-- 363
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ + + D+ DG +G
Sbjct: 364 TYKNGKTYFFKGTKYWKYTDTTMDDGYPKDISDGFAG 400
>gi|291415637|ref|XP_002724058.1| PREDICTED: matrix metalloproteinase 11 [Oryctolagus cuniculus]
Length = 492
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 68/204 (33%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + + AL WS+V LTF E
Sbjct: 103 VLSGGRWEKTDLTYRILRFPWQLVR-------EQVRRTVAEALQVWSEVTPLTFTEVHEG 155
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
H+DI + + +D + +++FD + W G +GT L
Sbjct: 156 HADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQ 215
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 216 VAAHEFGHVLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 248
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D +Q +YG P+ + +
Sbjct: 249 LSQDDRRGIQYLYGQPRSASTSET 272
>gi|29126959|gb|AAH47614.1| MMP24 protein [Homo sapiens]
Length = 626
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 137 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 189
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 190 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 249
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 250 ANHDGNDLFLVAVHELGHALGLEHSSDPSA-------------------IMAPFYQYMET 290
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 291 HNFKL-----PQ-DDLQGIQKIYGPP 310
>gi|166831586|gb|ABY90111.1| matrix metalloproteinase 24 preproprotein (predicted) [Callithrix
jacchus]
Length = 564
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 75 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 127
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 128 HEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 187
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 188 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 228
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 229 HNFKL-----PQ-DDLQGIQKIYGPP 248
>gi|326670156|ref|XP_692205.5| PREDICTED: stromelysin-3 [Danio rerio]
Length = 501
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 63/197 (31%), Gaps = 48/197 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-S 74
++L W + YK + + + + AL WS V LTF E +
Sbjct: 107 YVLFGGRWPKTDLTYKIQRFPWQMREDKV-------RRIFQEALKVWSDVTPLTFTEVVN 159
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILS 121
+DI + + +D + +I+FD + W G GT L
Sbjct: 160 QEADIVIDFTRYWHGDNLPFDGPGGILAHAFFPRTHREGDIHFDYDESWTVGNELGTDLL 219
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H +MS F SF Y
Sbjct: 220 QVAAHEFGHVLGLQHSLVPGA-------------------IMSPF--------YSFSYPL 252
Query: 182 TPMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 253 KLSEDDKKGIQYLYGPP 269
>gi|326931703|ref|XP_003211965.1| PREDICTED: matrix metalloproteinase-24-like [Meleagris gallopavo]
Length = 557
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 64/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D + R A W +V LTFEE
Sbjct: 93 YALTGQKWRQKHITYSVHNYTPKVGELDT-------RRAIRQAFDVWQRVTPLTFEEVPY 145
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 146 HEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 205
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 206 SNHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 246
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 247 HNFKL-----PQ-DDLQGIQKIYGPP 266
>gi|240141408|ref|YP_002965888.1| hypothetical protein MexAM1_META1p5007 [Methylobacterium extorquens
AM1]
gi|240011385|gb|ACS42611.1| hypothetical protein MexAM1_META1p5007 [Methylobacterium extorquens
AM1]
Length = 817
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 89/274 (32%), Gaps = 33/274 (12%)
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALG-LMHPGS--------YNGGYPVYGVDNDYE 154
F G HEIGH LG L P + +NG +
Sbjct: 106 FYDPTGVAAAPGNRFDAFTIFQHEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPVV 165
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-DIVAVQKIYGAP----------KGSLG 203
D V + +D M + + D+ +Q G P G+
Sbjct: 166 LDGARAHV---WGSEDLMDPYLGWGQRSYISDLDLAMLQDK-GMPISTERADKMWLGNRA 221
Query: 204 NNI--YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKNM 260
+ Y + ++ G+D L IGG N L+ + G + N
Sbjct: 222 DTFFAYGGDDWIDGGWGDDKLFGGVGNDTL----IGGDGNDA-LDGGVGNDTLIGGDGND 276
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-KIY 319
+ ++++G GND + G + ++ +G D +G G+D S Y +Y
Sbjct: 277 ALDGGVGNDTLIGGDGNDALDGGAGDDTLIGGNGGDTLEGGEGIDRAVLTGRSQDYVALY 336
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
++ + D L+ +E L F D +
Sbjct: 337 GATGSLAIKHLGSGSIDTLTSIETLNFDDTVLGM 370
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 12/173 (6%)
Query: 226 GGDDLLDLTLIGGVKNYI-DLNTESWSSIG---GYEKNMTIAQHTVIESVVGSSGNDVVI 281
G +DL+D L G ++YI DL+ G E+ + ++ G+D +
Sbjct: 175 GSEDLMDPYLGWGQRSYISDLDLAMLQDKGMPISTERADKMWLGNRADTFFAYGGDDWID 234
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--------ENAIIVYDANEH 333
G ++ F GND G G D + N ++
Sbjct: 235 GGWGDDKLFGGVGNDTLIGGDGNDALDGGVGNDTLIGGDGNDALDGGVGNDTLIGGDGND 294
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D + + L + + T +D + + G ++KH
Sbjct: 295 ALDGGAGDDTLIGGNGGDTLEGGEGIDRAVLTGRSQDYVALYGATGSLAIKHL 347
>gi|78099008|sp|Q499S5|MMP11_RAT RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
Precursor
gi|149043717|gb|EDL97168.1| matrix metallopeptidase 11, isoform CRA_b [Rattus norvegicus]
gi|149043718|gb|EDL97169.1| matrix metallopeptidase 11, isoform CRA_b [Rattus norvegicus]
Length = 491
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 71/215 (33%), Gaps = 49/215 (22%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 103 VLSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALRVWSEVTPLTFTEVHEG 155
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G KGT L
Sbjct: 156 RADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIG-DKGTDLLQ 214
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 215 VAAHEFGHVLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 247
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
D +Q +YG P+ + + + Q
Sbjct: 248 LSPDDRRGIQHLYGRPQLTPTSPTPTLSSQAGTDT 282
>gi|327277063|ref|XP_003223285.1| PREDICTED: matrix metalloproteinase-19-like [Anolis carolinensis]
Length = 475
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 87/237 (36%), Gaps = 43/237 (18%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + Y+ L +H + + A WS V LTF+E + +DI
Sbjct: 107 GRWRKRHLTYR---LYSHSEDMGA----AATRTAIKTAFKYWSDVTRLTFQEVRTGRADI 159
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ ++ + C+ +D ++FD A+ W G +G L A HEI
Sbjct: 160 RLAFHGSSPWGCSRPFDGPGHVLAHADIPELGTVHFDSAEHWTEGTPRGVNLRIIAAHEI 219
Query: 129 GHALGLMH--------PGSYNGGYPVYGVDND--------YENDSF-LTSVMSYFMPQDS 171
GHALGL H SY+G P + + +D Y + T+VM+ P +
Sbjct: 220 GHALGLGHSRHPTALMAPSYSGYRPRFRLHHDDIEGIQALYGKKTLSTTTVMT--SPART 277
Query: 172 MMDASFGYCA---TPMVSDIVAVQ-KIYGAPKGSLGNNIYKIEVQQKDSPF-IQTIY 223
+ + P + A+ Y G+ ++ + + P I ++
Sbjct: 278 TVPTVSVKPSKVPNPCKDGLDAIMLGPYDKTYAFRGDYVWTVTDFGTNPPLKISALW 334
>gi|456257|emb|CAA40918.1| stromelysin-3 precursor [Homo sapiens]
gi|58102165|gb|AAW65373.1| matrix metalloproteinase 11 (stromelysin 3) [Homo sapiens]
gi|119580007|gb|EAW59603.1| matrix metallopeptidase 11 (stromelysin 3), isoform CRA_a [Homo
sapiens]
Length = 488
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 67/204 (32%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + Y+ + ++ AL WS V LTF E
Sbjct: 99 VLSGGRWEKTDLTYRILRFPWQL-------VQEQVRQTMAEALKVWSDVTPLTFTEVHEG 151
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 152 RADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQ 211
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 212 VAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYPLS 244
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D VQ +YG P ++ +
Sbjct: 245 LSPDDCRGVQHLYGQPWPTVTSRT 268
>gi|260787547|ref|XP_002588814.1| hypothetical protein BRAFLDRAFT_89755 [Branchiostoma floridae]
gi|229273984|gb|EEN44825.1| hypothetical protein BRAFLDRAFT_89755 [Branchiostoma floridae]
Length = 2357
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 61/190 (32%), Gaps = 42/190 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI--- 79
W + Y+ + + + +AR A W+ V LTF DI
Sbjct: 118 WGRVDLTYRINSYPGE----NRLLAGEVDETIAR-AFQVWADVTPLTFRPVPKKPDIDIE 172
Query: 80 -----------KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F S N +++FD A+ W +GT L A+HE+
Sbjct: 173 FARGKHGNCRLHFDGSGNTLAHAYFPGEGLLGDVHFDAAERWTIQSPQGTNLFIVAVHEL 232
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + VM + P + A D+
Sbjct: 233 GHSLGLDHADHRDA-------------------VMFPWYPGYLGSSYLYQLPA----VDV 269
Query: 189 VAVQKIYGAP 198
A+Q +YG
Sbjct: 270 TAIQALYGVT 279
>gi|149043716|gb|EDL97167.1| matrix metallopeptidase 11, isoform CRA_a [Rattus norvegicus]
Length = 472
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 71/215 (33%), Gaps = 49/215 (22%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 103 VLSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALRVWSEVTPLTFTEVHEG 155
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G KGT L
Sbjct: 156 RADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIG-DKGTDLLQ 214
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 215 VAAHEFGHVLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 247
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
D +Q +YG P+ + + + Q
Sbjct: 248 LSPDDRRGIQHLYGRPQLTPTSPTPTLSSQAGTDT 282
>gi|257485400|ref|ZP_05639441.1| serralysin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 129
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 2 HNIKPVYTTERIADHLLRDQY-WSNYFIRYKPDVLTTHRLS---------FDITELNPNA 51
N KP Y+ ++ AD++LRD W++ ++ T + + N
Sbjct: 38 INGKPSYSVDQAADYILRDNAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTFSAFNAQQ 97
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
+ A ++ W+ V ++F + + D
Sbjct: 98 KAQAVLSMQSWADVAKVSFTQAASGGDGHMTF 129
>gi|146271906|emb|CAL29437.2| interstitial collagenase [Galleria mellonella]
Length = 326
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 93/278 (33%), Gaps = 63/278 (22%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+ R + L+ W + Y+ + D+ E+A+ A WS D
Sbjct: 14 FGESRAKRYALQGSRWRIKNLTYRIAKYPSRLNQADVDL------ELAK-AFSVWSDYTD 66
Query: 68 LTFEET---SIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIG 115
LTF + +H +++F + +G Y Y + +FD A+ W
Sbjct: 67 LTFTQKRSGQVHIEVRFETGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAETWTINSR 126
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMM 173
+GT L A HE GH+LGL H + + G D ++ D
Sbjct: 127 RGTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYDPAFQLDQ---------------- 170
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS---LGNNIYKIEVQQK---DSPFIQTIYDS-- 225
DI +Q +YG + G + + P TI++S
Sbjct: 171 ------------DDIQGIQALYGRKTQTDIGAGAATPRPTAEDPALCADPKFDTIFNSAD 218
Query: 226 ------GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G++ LT G Y L + +W + G
Sbjct: 219 GATFIFKGENYWRLTEDGVAAGYPRLISRAWPGLPGNI 256
>gi|35505497|gb|AAH57788.1| Matrix metallopeptidase 11 (stromelysin 3) [Homo sapiens]
Length = 488
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 67/204 (32%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + ++ AL WS V LTF E
Sbjct: 99 VLSGGRWEKTDLTYRILRFPWQL-------VQEQVRQTMAEALKVWSDVTPLTFTEVHEG 151
Query: 76 HSDIKFISSNN-----------GYVCTPRYDSRYF--MEINFDKADVWRYGIGKGTILSH 122
+DI + G + + + +++FD + W G +GT L
Sbjct: 152 RADIMIDFARYWHGDDLPFDGPGGILAHAFSPKTHREGDVHFDYDETWTIGDDQGTDLLQ 211
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 212 VAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYPLS 244
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D VQ +YG P ++ +
Sbjct: 245 LSPDDCRGVQHLYGQPWPTVTSRT 268
>gi|58331148|ref|NP_005931.2| stromelysin-3 preproprotein [Homo sapiens]
gi|317373418|sp|P24347|MMP11_HUMAN RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
Precursor
Length = 488
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 67/204 (32%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + ++ AL WS V LTF E
Sbjct: 99 VLSGGRWEKTDLTYRILRFPWQL-------VQEQVRQTMAEALKVWSDVTPLTFTEVHEG 151
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 152 RADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQ 211
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 212 VAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYPLS 244
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D VQ +YG P ++ +
Sbjct: 245 LSPDDCRGVQHLYGQPWPTVTSRT 268
>gi|329847956|ref|ZP_08262984.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843019|gb|EGF92588.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 542
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGN 277
T + G+D LD G DL + I G + +A +S+ G + N
Sbjct: 174 DTFFGGAGNDTLDGWHEG------DLLIGEAGNDLILGGNGDDRLAGGLGHDSLTGGTQN 227
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQ 335
D + G++ +V +G+DV DG SGLDT Y Y I+R ++ +++ D N
Sbjct: 228 DTLSGDTGEDVLTGGAGDDVIDGGSGLDTAVYSGNKADYDIFRIDDGVVLRDLRPNGDGT 287
Query: 336 DFLSDVERLRFADQCIDSVNVKQRS 360
D L V+RL FAD + ++ R
Sbjct: 288 DTLVLVDRLAFADGTVTMAHMLSRG 312
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 9/175 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ +GG D LD + L ++ G + TI T + + G G+D +
Sbjct: 3 LWGTGGHDRLDGSGDSDQI----LGVAGHDTLNGGSADDTIDGGTGNDVLSGGDGHDAME 58
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + ++ G DV GS+G DT Y F+ ++ + + D + +
Sbjct: 59 GGTGHDRLDGGGGTDVLIGSTGNDTLNGGDG-EDYLCAGFDGDRVMTNWGVDQLDGGAGL 117
Query: 342 ER---LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLS 392
+ R A +++ S+ +Y + +++V +F G+
Sbjct: 118 DTAVLFRGAATASIRFDLRDTSLTQYLDNGTGVVRVESVSLFSGRGADILTGGVR 172
>gi|62858237|ref|NP_001015992.1| matrix metallopeptidase 16 [Xenopus (Silurana) tropicalis]
gi|89271306|emb|CAJ82988.1| matrix metalloproteinase 16 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
Length = 607
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 65/207 (31%), Gaps = 55/207 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 118 YALTGQKWHHKHITYSIKNVTPKVG-------DSETRKAIRRAFDVWQNVTPLTFEEVPY 170
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 171 CELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 230
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 231 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQ---Y 268
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK 199
M+ T D+ +QKIYG P+
Sbjct: 269 METDNFKLPT---DDLQGIQKIYGPPE 292
>gi|227423|prf||1703414A metalloprotease
Length = 488
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 69/204 (33%), Gaps = 48/204 (23%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + Y+ + ++ AL WS V LTF E
Sbjct: 99 VLSGGRWEKTDLTYRILRFPWQL-------VQEQVRQTMAEALKVWSDVTPLTFTEVHEG 151
Query: 77 -SDI-----KFISSNNGYVCTPRY--DSRYFM------EINFDKADVWRYGIGKGTILSH 122
+DI ++ ++ P +F +++FD + W G +GT L
Sbjct: 152 RADIMIDFARYWDGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQ 211
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 212 VAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYPLS 244
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
D VQ +YG P ++ +
Sbjct: 245 LSPDDCRGVQHLYGQPWPTVTSRT 268
>gi|115495469|ref|NP_034938.3| matrix metalloproteinase-24 [Mus musculus]
gi|123236166|emb|CAM22837.1| matrix metallopeptidase 24 [Mus musculus]
gi|162317834|gb|AAI56392.1| Matrix metallopeptidase 24 [synthetic construct]
Length = 618
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 129 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 181
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 182 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 241
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 242 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 282
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 283 HNFKL-----PQ-DDLQGIQKIYGPP 302
>gi|13929064|ref|NP_113945.1| matrix metalloproteinase-24 [Rattus norvegicus]
gi|20138812|sp|Q99PW6|MMP24_RAT RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|12862768|dbj|BAB32589.1| membrane-type matrix metalloproteinase 5 [Rattus norvegicus]
Length = 618
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 129 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 181
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 182 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 241
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 242 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 282
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 283 HNFKL-----PQ-DDLQGIQKIYGPP 302
>gi|78356461|ref|YP_387910.1| hypothetical protein Dde_1416 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218866|gb|ABB38215.1| hypothetical protein Dde_1416 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 1424
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Query: 198 PKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IG 254
GS + +Y + T+Y G+D L G + DL ++ +
Sbjct: 386 NGGSGDDTLYGGTGDDLIRGGADNDTLYGEDGNDTLR-----GNQGNDDLYGDAGDDRLF 440
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N T+ + + G +GND++ G + N+ SGND+ DG +G DT + S
Sbjct: 441 GGEGNDTLDGGADNDFLSGGAGNDLLHGGAGNDTLTGGSGNDLLDGGAGNDTVVFRGASG 500
Query: 315 LYKIYRFENAIIVYDANEHKQD---FLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
Y I R ++ + N +D +++VE+L+F D +V +
Sbjct: 501 QYTITRTQDGGYRIEDNVEGRDGITTVTNVEQLQFKDGTFTPEDVAAPLSITLNNQNT 558
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+ GND + GN ++ SG+D+ DG SG+DT Y + + +
Sbjct: 196 DLLAGTGGNDTIFGNEGDDTLIGGSGDDMLDGGSGIDTASYAGAGSG---VQADLSAGTA 252
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HF 386
D L +E L + + + L A + L G D + F
Sbjct: 253 TGTTTGNDTLDGIENLTGSAFNDTLTGSDENNSLLGDAGDDRLFGGEGNDTLDGGADNDF 312
Query: 387 YEFGLSEG 394
G
Sbjct: 313 LSGGAGND 320
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 15/177 (8%)
Query: 222 IYDSGGDDLLDLT----LIGGVKNYIDLNTESWSS----------IGGYEKNMTIAQHTV 267
++ G+D LD + G L+ + + + G + T+
Sbjct: 295 LFGGEGNDTLDGGADNDFLSGGAGNDLLHGGAGNDELRGGGGDDDLYGDAGDDTLYGGAG 354
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G G+DV+ G S + +GND +G SG DT + L + + +
Sbjct: 355 SDLLQGGEGDDVLHGGSGVDYLNGGAGNDTLNGGSGDDTLYGGTGDDLIRGGADNDTLYG 414
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D N+ + + + A + L+ A + L G D+
Sbjct: 415 EDGNDTLRGNQGNDDLYGDAGDDRLFGGEGNDT-LDGGADNDFLSGGAGNDLLHGGA 470
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL---NTESWSSIGGYEKNMT 261
NIY + Q T++ G D D+ +T + S G +
Sbjct: 1213 NIYFSDAQLNGGNQHATLHTDGTISWEDSRHWINNFGNDDIFVQHTTNQSGAHGSDHADM 1272
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T+ +++VG +GND++ GN ++V +GND+ G G DTF + A L+
Sbjct: 1273 LIGGTLPDNLVGGAGNDILFGNEGHDVLNGGAGNDILTGGQGADTFVFTAQ-GLHDGQSA 1331
Query: 322 ENAIIVYDANEHKQDFLSD 340
+ I ++ NE +SD
Sbjct: 1332 IDHITDFNVNEGDVLDISD 1350
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 20/173 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL------IGGVKNYIDLNTES 249
GA ++ + ++V D T+ + G+ +D + G +D+NT
Sbjct: 797 GADHITISGSTGNLDVSAGDGANHVTVSGAHGNTQIDTGTNADTVSVSGTSTRLDINTGG 856
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S + T V +G D V +G V DG SG DT
Sbjct: 857 GSDTVTLSGSHTDVS------VSTGAGKDHV-------TINGFAGAAVLDGGSGYDTLSL 903
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y + +++++ D + D + E FAD + + + +
Sbjct: 904 AGSRADYSFEKHGDSLLITDTYGNSLD-ATSFESFTFADGGYSADQLTNTAPV 955
>gi|157110775|ref|XP_001651241.1| matrix metalloproteinase [Aedes aegypti]
gi|108878613|gb|EAT42838.1| matrix metalloproteinase [Aedes aegypti]
Length = 573
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 27/167 (16%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ R + L+ W + Y+ + D E++ +E+A+ A WS+ DL
Sbjct: 106 SDSRSKRYALQGSRWKVKALTYRISKYPSR---LDRAEVD---KEIAK-AFSVWSEYTDL 158
Query: 69 TFE---ETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGK 116
TF +H DI+F + +G Y Y + +FD A+ W G +
Sbjct: 159 TFTAKKSAPVHIDIRFEVNEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEFWTIGKSR 218
Query: 117 GTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYEN 155
GT L A HE GH+LGL H Y G PV+ +D+D
Sbjct: 219 GTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFRLDSDDVQ 265
>gi|242013009|ref|XP_002427215.1| Matrix metalloproteinase, putative [Pediculus humanus corporis]
gi|212511510|gb|EEB14477.1| Matrix metalloproteinase, putative [Pediculus humanus corporis]
Length = 542
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 64/284 (22%), Positives = 89/284 (31%), Gaps = 64/284 (22%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + R + L+ W + + YK ++ V A WS
Sbjct: 98 VTSNSRSKRYALQGSRWKVHNLTYKISKYPRALKKSEV-------DSVVERAFKVWSDYT 150
Query: 67 DLTFE---ETSIHSDIKFI---------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
DLTF S+H D++F G Y Y + +FD + W
Sbjct: 151 DLTFTLKKSGSVHIDVRFERGEHGDGDPFDGRGGTLAHAYFPIYGGDAHFDDDERWTVKS 210
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSM 172
GT L A HE GH+LGL H + Y G +E DS
Sbjct: 211 YSGTNLFQVAAHEFGHSLGLSHSDIRSALMAPYYRGYQPYFELDS--------------- 255
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLG-----NNIYKIEVQQKDSPFIQTIYDS-- 225
DI +Q +YG G+ G N+IY + S D+
Sbjct: 256 -------------DDIRGIQILYGKKSGNKGTTESPNSIYDDDELCSLSSVDTIFIDAKE 302
Query: 226 -----GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
GD LT G Y ++SW G N+ A
Sbjct: 303 NTYVFKGDKYWRLTDDGMAPGYPKTISKSWP---GLPSNIDAAF 343
>gi|148674197|gb|EDL06144.1| matrix metallopeptidase 24 [Mus musculus]
Length = 570
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 81 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 133
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 134 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 193
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 194 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 234
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 235 HNFKL-----PQ-DDLQGIQKIYGPP 254
>gi|316935446|ref|YP_004110428.1| 5'-nucleotidase domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603160|gb|ADU45695.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris DX-1]
Length = 2775
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 13/174 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+V + I G D + + G + + G + + I
Sbjct: 2257 GDDVALSTAAGGFVIDGGAGSDTIAMDYTYGGDDV----------LVGGDGDDYIYAGAG 2306
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--KIYRFENAI 325
+ + G + ND + GN +++ +G+D DG +G DT Y Y + + I
Sbjct: 2307 NDQLDGGADNDTLFGNDGDDLIRGGAGDDTIDGGAGADTATYAGNFAGYATSLNTDGSLI 2366
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTASYEDLIQVIGQD 378
+ A D LS++E+L F D + + + G D
Sbjct: 2367 VPDQAGTDGADKLSNIEQLVFTDGAWTLRTGTDGNDTIAGGTGNDLVFGGAGND 2420
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 60/188 (31%), Gaps = 10/188 (5%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN+ + + +I G D LDL+ G S+++
Sbjct: 2505 GGAGNDTLIGGGGDDVLRGGSGDDSIDGGAGFDTLDLSDATGAVTI------SFTAGTAT 2558
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ T IES V G D V G + +V GNDV G +G D F A
Sbjct: 2559 GAGIGTDHFTGIESFVLGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLFGGAGDDSL 2618
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ ++ S V+ + D D + IL A + + G
Sbjct: 2619 D-GGSGDDVVDGGIGNDTLKGGSGVDIISGGDGNDDIDGGSENDILNGGAGNDIIKGGSG 2677
Query: 377 QDVFESMK 384
D+
Sbjct: 2678 ADIITGGA 2685
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 29/183 (15%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
YD G GDD +D +LI + +DL + +E+ +G++ D +I
Sbjct: 2431 YDGGAGDDTIDYSLIDF-RLTVDLGAGRAYYPDYLPGADHLFS---VENAIGTAFGDTLI 2486
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--------------- 326
G NV G+D+ G +G DT + + +++I
Sbjct: 2487 GTDGANVLNGGLGDDLLFGGAGNDTLIGGGGDDVLRGGSGDDSIDGGAGFDTLDLSDATG 2546
Query: 327 ---------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
D + +E + ++ + + G
Sbjct: 2547 AVTISFTAGTATGAGIGTDHFTGIESFVLGEGADRVTGGNGADVINGGGGNDVIAGGAGN 2606
Query: 378 DVF 380
D
Sbjct: 2607 DKL 2609
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 69/194 (35%), Gaps = 11/194 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLDL-TLIGGVKNYID---LN 246
GA + + GN I + ++ GDD LD + V I L
Sbjct: 2578 GADRVTGGNGADVINGGGGNDVIAGGAGNDKLFGGAGDDSLDGGSGDDVVDGGIGNDTLK 2637
Query: 247 TESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S I G + N I + + + G +GND++ G S ++ +GND+ G SG D
Sbjct: 2638 GGSGVDIISGGDGNDDIDGGSENDILNGGAGNDIIKGGSGADIITGGAGNDILTGGSGAD 2697
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEY 364
F + A + F D + ++ + + Q + V V +
Sbjct: 2698 VFVFAAGFGKDIVTDFATKGSSADVLQFSSSMFANFTDVMSHTTQVGNDVVVTLDADNSL 2757
Query: 365 TASYEDLIQVIGQD 378
T + + + D
Sbjct: 2758 TLANTQIGSLAADD 2771
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G G+D + G ++V +G+D DG +G D ++ +I
Sbjct: 1684 DNLDGGEGDDTLEGGEGDDVLAGGAGDDTLDGGAGDDRLAGGEGDDTLLGGDGDDVLIAG 1743
Query: 329 DANEHKQDFLSDVERL 344
D + Q + E +
Sbjct: 1744 DGYDTLQGGAGNDELV 1759
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
S GDD L +GG I L ++ G E + T+ + + G +G+D + G +
Sbjct: 1662 SSGDD--RLAGLGGDDVLIGL--GGDDNLDGGEGDDTLEGGEGDDVLAGGAGDDTLDGGA 1717
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ G+D G G D + + ++
Sbjct: 1718 GDDRLAGGEGDDTLLGGDGDDVLIAGDGYDTLQGGAGNDELV 1759
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 13/124 (10%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GGDD LD G + L + G + T+ + + G G+D ++G
Sbjct: 1681 GGDDNLD-----GGEGDDTLEGGEGDDVLAGGAGDDTLDGGAGDDRLAGGEGDDTLLGGD 1735
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-------IYRFENAIIVYDANEHKQDF 337
++V G D G +G D + ++ I D
Sbjct: 1736 GDDVLIAGDGYDTLQGGAGNDELVAGEGDSADGGDGDDLIVVSTDDGIPTSIDGGDGNDT 1795
Query: 338 LSDV 341
+ +
Sbjct: 1796 VKLI 1799
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E + + G + +A + ++G G+D + G ++ G+DV G +G DT
Sbjct: 1653 DEGDNELTGSSGDDRLAGLGGDDVLIGLGGDDNLDGGEGDDTLEGGEGDDVLAGGAGDDT 1712
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSD 340
A ++ ++ D ++ D L
Sbjct: 1713 LDGGAGDDRLAGGEGDDTLLGGDGDDVLIAGDGYDTLQG 1751
>gi|327271606|ref|XP_003220578.1| PREDICTED: matrix metalloproteinase-24-like [Anolis carolinensis]
Length = 604
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W +V LTFEE
Sbjct: 115 YALTGQKWRQKHITYSVHNYTPKVGELDT-------RKAIRQAFDVWQRVTPLTFEEVPY 167
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 168 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 227
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 228 SNHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 268
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 269 HNFKL-----PQ-DDLQGIQKIYGPP 288
>gi|7107462|gb|AAF36415.1| rhizobiocin RzcA [Rhizobium leguminosarum bv. trifolii]
Length = 4163
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 77/239 (32%), Gaps = 30/239 (12%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP--------FIQ 220
+ D G ++ + +YG P N + + +
Sbjct: 3924 GTTGNDTLSGGGGNDTINGVAGNDTLYGDPGNDTLNGGDGNDAHFGGAGDDLLIGNLGVD 3983
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTE--SWSSIGGYEKNMTI-----------AQHTV 267
T G+D LD + + IDL ++S E+ ++I + ++
Sbjct: 3984 TFDGGDGNDTLDFSYYTTASHTIDLAAGLVTFSDASPAEQIVSIENVVGGSGVNDIRGSL 4043
Query: 268 IES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ + G +GNDV+ GN N++ SG+D G SG D F + A + F +
Sbjct: 4044 ADNKLDGGAGNDVISGNDGNDILIGGSGDDTLTGGSGNDAFVFRAGFGKDTVTDFVAGV- 4102
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D DV FAD Q I + S+ H
Sbjct: 4103 -------ASDDFIDVNTSVFADFASVMAAATQVGADTLITHNSSNIITLKNVALTSLHH 4154
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 5/108 (4%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S I G T+A T +++ G GND + G + N+ + GND +G G D F
Sbjct: 3909 AASWIRGTVAGETLAGTTGNDTLSGGGGNDTINGVAGNDTLYGDPGNDTLNGGDGNDAHF 3968
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
A L N + D L D A ID
Sbjct: 3969 GGAGDDLL----IGNLGVDTFDGGDGNDTL-DFSYYTTASHTIDLAAG 4011
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G+ GND + G++ + G+D +G G DT+ Y ++ +
Sbjct: 2361 NQQGTPGNDTITGSNIADTLAGGKGDDTINGGGGYDTYVYARGDGNDTMFDGD 2413
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 27/66 (40%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ TI + +++ G GND++ + GNDV DG D+++Y
Sbjct: 2216 SGDDTINGFELDDTINGGGGNDIINAGKGADSITGGRGNDVIDGGGWSDSYYYSRGDGND 2275
Query: 317 KIYRFE 322
I +
Sbjct: 2276 TIVDGD 2281
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 31/73 (42%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+D + G NN +GND+ +G G DT+ + +I + D +
Sbjct: 2082 TDGDDHIYGFWTNNTLDGGAGNDILEGGDGSDTYVFGYGYGHDEIQENYGIVTYDDDDAV 2141
Query: 334 KQDFLSDVERLRF 346
+ D++ + F
Sbjct: 2142 RFAXGVDLDDVTF 2154
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 257 EKNMTIAQHTVIESVVGSS---GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ +IA + + +V+ G DV+ G ++V +GND G +G DT+ +
Sbjct: 1925 SGDQSIAWYQIATTVIAGQKTDGADVIEGFDIDDVLDGGAGNDTLYGYNGNDTYVWGRGY 1984
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+I + N D + + + D + I+ + E L
Sbjct: 1985 GNDQIQERGAGAL----NGGDYDKIIFHDYVSADDIVLSRTPGASDIIITLKDTGETLT 2039
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++GND + G++ ++ F GNDV +G G DT+ Y +
Sbjct: 2758 IQATAGNDSIDGSNGDDTFEGGLGNDVLNGLGGNDTYRYSRGDGADTVIEGSAGG 2812
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V ++GND + G S+ + GND +G+ G D + Y N +I
Sbjct: 2889 AVSTTGNDTITGFSSGDDITGGLGNDTINGAGGNDVYHYARGD--------GNDVITEAI 2940
Query: 331 NEHKQDFLSD 340
D L+
Sbjct: 2941 ANGMADTLAF 2950
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 7/130 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + ++ +G G L +L +D ++ +
Sbjct: 3349 ANAADVTLVRNGNDVTVLVAESAVGAGNAGSITLKASLQDYYGRGVD--AIVFADGTTWS 3406
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ IA I V G++GN+ + G+S + +GND G +G DT+FY A
Sbjct: 3407 RADMIAH---IAYVGGAAGNETISGSSDADQIRAGAGNDTLVGGAGNDTYFYSAGDGNDI 3463
Query: 318 IYRFENAIIV 327
+ + V
Sbjct: 3464 LDEQTSGTDV 3473
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 14/94 (14%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYLYKIYRF 321
+SG+D + G ++ GND+ + G G D S Y R
Sbjct: 2212 AQSTSGDDTINGFELDDTINGGGGNDIINAGKGADSITGGRGNDVIDGGGWSDSYYYSRG 2271
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ + D D+ +RL F D V+
Sbjct: 2272 DGNDTIVDG-----DWSGGSDRLFFKDVNSSEVS 2300
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++GND + G + S+G+D +G G D + Y ++ +
Sbjct: 2496 TTAGNDTITGTGRGDTLRGSAGDDTLNGGGGGDAYVYARGDGNDTMFDGD 2545
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG++GND ++G S ++F G+D F+ +G D + Y I ++ + D
Sbjct: 3661 IVGTAGNDTLVGTSDADIFIGGEGDDRFNSGAGSDIYVYAKGDGNDYIDDESSSTVDVDI 3720
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
G++ NDV+ G + + G+D +G DT+ Y I +ENA
Sbjct: 3155 GTASNDVIDGFNIADTIRGGKGDDTLNGQGSNDTYLYARGDGNDTITDYENAG 3207
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIV 327
++GND + G+ ++ +G+D G G D + + I + + +
Sbjct: 2628 ATAGNDTINGSDRADILHGDAGDDTLTGRGGSDLYVWAHGDGSDTIIEGDWSGTGDRLQL 2687
Query: 328 YDANEHKQDFLSDVERLRF 346
D N +L + +
Sbjct: 2688 SDVNAQDVTYLRNGNDIVI 2706
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G+D + G+ NN+ G+D G G D S F +++ V D
Sbjct: 518 ATDGDDQITGSDENNIIAGGDGDDTLTGHLGGDLLVGGNGSDT-----FIDSVTVTDHQT 572
Query: 333 HKQ 335
+Q
Sbjct: 573 GRQ 575
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 13/208 (6%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G +V G+D+ +G D + Y I+ FE +A + QD L
Sbjct: 1668 LTGTEDIDVLQGGKGDDLLEGGGDTDIYRYGRGDGQDTIHDFEG-----NAFRNDQDMLQ 1722
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
++ +R D ++ + S D I + GQ + + ++ TF
Sbjct: 1723 FLDGIRSDDLIFQRDGASNDLVIRFKNSPLDQITIQGQFAATYTGPYGTWYMNRIDLFTF 1782
Query: 400 DSYLYLGS---YDDLRNVFGSDRGAAA-----RHYITHGVKEGRNPDAFKALEYIASHED 451
D L S + +D + G + + Y+ + D
Sbjct: 1783 DDGSSLTSDQVASIVLQAHSTDGNDELYGMEREDILRAGKGDDFISGGNQNDLYLYALGD 1842
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ D + G D F FG R
Sbjct: 1843 GHDVIQDRMTNILSGTDDFLRFGAGIDR 1870
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 32/156 (20%)
Query: 203 GNNIYKIEVQQKDSPFIQTI-------------------YDSGGDD---LLDLTLIGGVK 240
GN++Y + + I + G D + ++ GG
Sbjct: 2921 GNDVYHYARGDGNDVITEAIANGMADTLAFNGIFASDVSWGRSGTDLVLTIAPSVAGGTD 2980
Query: 241 -NYIDLNTESWSSIGGYEKNMTIAQHTV---------IESVVGSSGNDVVIGNSANNVFF 290
+ I L ++ + A V + +V G++ + V G + +++
Sbjct: 2981 GSTITLKGALDANAEQGIERFVFADGAVWTFVDFAAQVVNVAGTTAAETVNGTNGSDIIR 3040
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ +DV +G G D + Y I N
Sbjct: 3041 ANADSDVINGGGGSDVYLYQRGDGNDTINDDANGGS 3076
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
++ + N+ S+G+D F+G G D + Y+ R + A V + + D
Sbjct: 2757 IIQATAGNDSIDGSNGDDTFEGGLGNDVLNGLGGNDTYRYSRGDGADTVIEGSAGGAD 2814
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-----IV 327
+ G + + G + + G+D +G DT+ Y I +ENA +
Sbjct: 3287 ATDGKNTIDGFNVADTIHGGKGDDSLNGQGNNDTYVYTRGDGNDVITEYENAGGSDRLVF 3346
Query: 328 YDANEHKQDFLSDVERLR 345
DAN + + +
Sbjct: 3347 ADANAADVTLVRNGNDVT 3364
Score = 44.7 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 52/178 (29%), Gaps = 42/178 (23%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFF-YYAPSYLYKI 318
I +S+ GS+G+D G N+V GND + G DT A ++
Sbjct: 2758 IQATAGNDSIDGSNGDDTFEGGLGNDVLNGLGGNDTYRYSRGDGADTVIEGSAGGADDRL 2817
Query: 319 YRFENAIIVYDANEHKQDF--------------------------LSDVERLRFADQC-- 350
+ + D VE + FAD
Sbjct: 2818 VFTNINSTEVSLSRNGTDLTITIPKSTPTVNDAGSVLLRAALDGDQGGVETVVFADGVEW 2877
Query: 351 ---------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDI 397
+ +V+ + +S +D+ +G D Y + +G D+
Sbjct: 2878 TKNDIRVKLLGAVSTTGNDTITGFSSGDDITGGLGNDTINGAGGNDVYHYARGDGNDV 2935
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L A + + GS N+++ G ++ G D+ G +G
Sbjct: 499 LTLGDTVDGYDRYHAGLFAATDGDDQITGSDENNIIAGGDGDDTLTGHLGGDLLVGGNGS 558
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHK---QDFLSDVERLRFADQCIDSVNVKQRS 360
DTF ++ R + NE+ DFL + + D SV+
Sbjct: 559 DTFIDSVTVTDHQTGRQNENDVYIGGNENVGLLTDFLEWLVGVTETDTVRYSVDNLTED 617
Score = 40.5 bits (93), Expect = 0.84, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D +D G + N W++ + + A +++ G+ D + G++ ++
Sbjct: 2461 DTVDGFYEKGFETIQFANGTVWTNDQVRQMLVDQATTAGNDTITGTGRGDTLRGSAGDDT 2520
Query: 289 FFESSGND--VFDGSSGLDTFFYYAPSYLYKIYRF 321
G D V+ G DT F S RF
Sbjct: 2521 LNGGGGGDAYVYARGDGNDTMFDGDWSGNGDQIRF 2555
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 27/101 (26%), Gaps = 1/101 (0%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G I L G + A T + V G + N SS D
Sbjct: 3374 AGNAGSITLKASLQDYYGRGVDAIVFADGTTWSRADMIAHIAYVGGAAGNETISGSSDAD 3433
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+G DT A + Y Y + + D D
Sbjct: 3434 QIRAGAGNDTLVGGAGNDTY-FYSAGDGNDILDEQTSGTDV 3473
Score = 37.8 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 25/77 (32%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ GND + G ++ G+D G + D + Y I I+
Sbjct: 1800 AHSTDGNDELYGMEREDILRAGKGDDFISGGNQNDLYLYALGDGHDVIQDRMTNILSGTD 1859
Query: 331 NEHKQDFLSDVERLRFA 347
+ + D E + F
Sbjct: 1860 DFLRFGAGIDREDITFG 1876
>gi|6981212|ref|NP_037112.1| stromelysin-3 [Rattus norvegicus]
gi|1762128|gb|AAC53061.1| stromelysin 3 [Rattus norvegicus]
gi|133777189|gb|AAH99781.2| Matrix metallopeptidase 11 [Rattus norvegicus]
Length = 458
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 71/215 (33%), Gaps = 49/215 (22%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 70 VLSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALRVWSEVTPLTFTEVHEG 122
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G KGT L
Sbjct: 123 RADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIG-DKGTDLLQ 181
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 182 VAAHEFGHVLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 214
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
D +Q +YG P+ + + + Q
Sbjct: 215 LSPDDRRGIQHLYGRPQLTPTSPTPTLSSQAGTDT 249
>gi|31217385|gb|AAH52854.1| Matrix metallopeptidase 11 [Mus musculus]
Length = 492
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 66/196 (33%), Gaps = 48/196 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 103 VLSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEG 155
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 156 RADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQ 215
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL + + ++MS F +F Y +
Sbjct: 216 VAAHEFGHVLGL-------------------QRTTAAKALMSPF--------YTFRYPLS 248
Query: 183 PMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 249 LSPDDRRGIQHLYGRP 264
>gi|147900438|ref|NP_001083604.1| matrix metalloproteinase-28 b [Xenopus laevis]
gi|38197301|gb|AAH61659.1| MGC68506 protein [Xenopus laevis]
Length = 497
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 69/197 (35%), Gaps = 53/197 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEET-SIHSDIK 80
W + Y+ + L+ + ++ + A WS V LTF E +DI+
Sbjct: 117 WYKRHLTYQIVNWPWY--------LSKHQVRQAVKAAFQLWSNVSSLTFSEALRDPADIR 168
Query: 81 FISSN--------NGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNALHEI 128
N + + F E +FD A+ W GKG L HEI
Sbjct: 169 LAFYEGDHNDGAGNAFDGPGGALAHAFFPRRGEAHFDSAEHWSLD-GKGRNLFVVLAHEI 227
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYCATPMVSD 187
GH LGL H N +MS Y+ + D + D
Sbjct: 228 GHTLGLQHSSFKNA-------------------LMSPYYKKLN--KDYVLNF------DD 260
Query: 188 IVAVQKIYGAPKGSLGN 204
++A+Q +YGAP GN
Sbjct: 261 VLAIQNLYGAP--PSGN 275
>gi|12643347|sp|Q9R0S2|MMP24_MOUSE RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|5689227|dbj|BAA82966.1| membrane-type-5 matrix metalloproteinase [Mus musculus]
Length = 618
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 129 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 181
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 182 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 241
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 242 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 282
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 283 HNFKL-----PQ-DDLQGIQKIYGPP 302
>gi|321469983|gb|EFX80961.1| hypothetical protein DAPPUDRAFT_303785 [Daphnia pulex]
Length = 559
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 65/166 (39%), Gaps = 27/166 (16%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---E 72
+ L+ W + Y + + D+ +E+A+ A W V +LTF
Sbjct: 76 YALQGARWRVKQLTYSITKYPSALKTTDV------DRELAK-AFQVWEDVTELTFVHLRT 128
Query: 73 TSIHSDIKFISSN---------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+H +I+F S G Y Y + +FD+++ W KGT L
Sbjct: 129 GKVHIEIRFESGEHGDGDAFDGTGGTLAHAYFPIYGGDAHFDESETWTINSYKGTNLFQV 188
Query: 124 ALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTS 161
A HE GH+LGL H Y G P + +DND + T+
Sbjct: 189 AAHEFGHSLGLSHSDVRSALMAPFYRGYEPSFKLDNDDSQNVATTT 234
>gi|213625068|gb|AAI69744.1| MT3-MMP protein [Xenopus laevis]
Length = 608
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 64/207 (30%), Gaps = 55/207 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T ++ R A W V LTFEE
Sbjct: 119 YALTGQKWHHKHITYSIKNVTPKVGDL-------ETRKAIRRAFDVWQNVTPLTFEEVPY 171
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 172 CELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 231
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 232 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQ---Y 269
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK 199
M+ T D+ +QKIYG P+
Sbjct: 270 METDNFKLPT---DDLQGIQKIYGPPE 293
>gi|148233994|ref|NP_001085262.1| matrix metallopeptidase 16 (membrane-inserted) [Xenopus laevis]
gi|75863761|gb|AAQ76702.2| membrane-type matrix metalloproteinase 3 precursor [Xenopus laevis]
Length = 613
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 64/207 (30%), Gaps = 55/207 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T ++ R A W V LTFEE
Sbjct: 124 YALTGQKWHHKHITYSIKNVTPKVGDL-------ETRKAIRRAFDVWQNVTPLTFEEVPY 176
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 177 CELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 236
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 237 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQ---Y 274
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK 199
M+ T D+ +QKIYG P+
Sbjct: 275 METDNFKLPT---DDLQGIQKIYGPPE 298
>gi|126642450|ref|YP_001085434.1| putative hemolysin-type calcium-binding region [Acinetobacter
baumannii ATCC 17978]
gi|126388334|gb|ABO12832.1| Putative Ig protein [Acinetobacter baumannii ATCC 17978]
Length = 442
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG------GYEKNMTIAQHTVI 268
DS I+D G D ++ + IDLN WS IG ++I T I
Sbjct: 3 DSTKGVLIWDGAGVDTINASNAT-QAATIDLNQGGWSYIGEKSPHISSANQLSINLGTQI 61
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G + +D+++GN+ +N +GND G+ G D A + + +++I
Sbjct: 62 ENAIGGAYDDILVGNNLSNRLEGGAGNDTLKGNWGDDVLLGGAGNDTLDGGKGADSLIGG 121
Query: 329 DANE 332
++
Sbjct: 122 TGDD 125
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++ Y ++ + + ++ TL ++N + LN + G N
Sbjct: 120 GGTGDDTYYVDNVGDSIVENTSEGNDKVISDINYTLGDNLEN-LTLNGADNLNGNGNALN 178
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + ++ G +GND + G + N+ +GND DG G+DT +Y +
Sbjct: 179 NVIIGNAGNNNLNGYAGNDTLNGGAGNDTLDGGAGNDTLDGGIGIDTLIGGLGDDIYYVD 238
Query: 320 RFENAII 326
+ II
Sbjct: 239 NVNDVII 245
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 45/134 (33%), Gaps = 25/134 (18%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYI------------DLNTE- 248
Y T+ G+D LD TLIGG+ + I +N
Sbjct: 193 YAGNDTLNGGAGNDTLDGGAGNDTLDGGIGIDTLIGGLGDDIYYVDNVNDVIIEKINEGF 252
Query: 249 -------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
S++ G N T G+ + ++GNS NN+ + NDV +G
Sbjct: 253 ETVNSTVSYALDSGNALNNLNLLGTDNIDGTGNGNGNTIVGNSGNNILSGGTNNDVLNGG 312
Query: 302 SGLDTFFYYAPSYL 315
+G D +
Sbjct: 313 AGNDILNGGKDNDT 326
>gi|189520793|ref|XP_699803.3| PREDICTED: matrix metalloproteinase-24 [Danio rerio]
Length = 608
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 64/208 (30%), Gaps = 55/208 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y T D Q R A W V L+F+E +
Sbjct: 118 YALTGQKWRDKKITYSIHNFTPKVGEKDT-------QRAIRQAFDVWQTVTPLSFQEVAY 170
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
+DI G++ + + +FD + W G
Sbjct: 171 SEIKNEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 230
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 231 ANHDGNDLFLVAVHELGHALGLEHSSDPSA-------------------IMAPFYQYMET 271
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +QKIYG P
Sbjct: 272 HNFK------LPLDDLQGIQKIYGIPTA 293
>gi|283852348|ref|ZP_06369619.1| hypothetical protein DFW101DRAFT_2189 [Desulfovibrio sp. FW1012B]
gi|283572305|gb|EFC20294.1| hypothetical protein DFW101DRAFT_2189 [Desulfovibrio sp. FW1012B]
Length = 368
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 69/195 (35%), Gaps = 29/195 (14%)
Query: 23 WSNYFIRYKPDVLTTHRLSFD--------------ITELNPNAQEVARWALGEWSKVVDL 68
W++ + S D N N + A AL E SK+ +
Sbjct: 172 WNDLASTQSNTLYYMFPTSADTVQSQGFSAANLSQFAGFNQNQKAGAVEALTELSKITGI 231
Query: 69 TFEETSIH--SDIKFISSNNGYVCTPRYDSR---YFMEINFDKADVWRYGIGKGTILSHN 123
TF ET+ ++I S+ G D+ Y + + + + GT
Sbjct: 232 TFVETTDANLANIYMFGSDIGNDVAGLADAGTQRYKITVAVNSTYSTTADLRSGTGDHEL 291
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HE+GHAL + HP + P D+ +VMSY P D+ S +
Sbjct: 292 IEHELGHALDMKHPFQGSVQLPT-------AQDNNNYTVMSYTAPSDTWYSVS---SSIY 341
Query: 184 MVSDIVAVQKIYGAP 198
DI A+Q +YG
Sbjct: 342 GPYDIAALQYMYGTD 356
>gi|300797815|ref|NP_001179551.1| matrix metalloproteinase-16 [Bos taurus]
gi|297482541|ref|XP_002692871.1| PREDICTED: matrix metallopeptidase 16 (membrane-inserted) [Bos
taurus]
gi|296480445|gb|DAA22560.1| matrix metallopeptidase 16 (membrane-inserted) [Bos taurus]
Length = 607
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 67/206 (32%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H P + Y+ +M D+
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSND-----PTAIMAPFYQ-----------YMETDNF 276
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
S D+ +QKIYG P
Sbjct: 277 KLPS---------DDLQGIQKIYGPP 293
>gi|13786841|pdb|1HV5|A Chain A, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786842|pdb|1HV5|B Chain B, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786843|pdb|1HV5|C Chain C, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786844|pdb|1HV5|D Chain D, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786845|pdb|1HV5|E Chain E, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786846|pdb|1HV5|F Chain F, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
Length = 165
Score = 85.2 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 65/196 (33%), Gaps = 48/196 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + Y+ + ++ AL WS+V LTF E
Sbjct: 3 VLSGGRWEKTDLTYRILRFPWQLVR-------EQVRQTVAEALQVWSEVTPLTFTEVHEG 55
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI + + +D + +++FD + W G +GT L
Sbjct: 56 RADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQ 115
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H + ++MS F +F Y +
Sbjct: 116 VAAHEFGHVLGLQHT-------------------TAAKALMSPF--------YTFRYPLS 148
Query: 183 PMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 149 LSPDDRRGIQHLYGRP 164
>gi|326671556|ref|XP_003199461.1| PREDICTED: matrix metalloproteinase-19-like [Danio rerio]
Length = 417
Score = 85.2 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 67/213 (31%), Gaps = 47/213 (22%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHS 77
R YW + Y+ T Q R A WS V L+F E +
Sbjct: 46 RFGYWRKKNLTYRIYNYTPDMGK-------SATQTAIRTAFKYWSDVTPLSFTEIHFGTA 98
Query: 78 DIKFIS----------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
DI+ G+V + ++FD+ + W G G+ L A HE
Sbjct: 99 DIRISFHKRDGCPSPFDGPGHVLAHAEAPPSGI-VHFDEDEFWTEGKYYGSNLRIVAAHE 157
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
IGHALGL H Y + + + D
Sbjct: 158 IGHALGLGHSQ--------------------------YSSALMAAHYTGYQVNFRLHIDD 191
Query: 188 IVAVQKIYG--APKGSLGNNIYKIEVQQKDSPF 218
I +Q IYG + ++IY + +PF
Sbjct: 192 IRGIQAIYGKRVSSTTTADDIYDVTYPTMMAPF 224
>gi|148242014|ref|YP_001227171.1| hypothetical protein SynRCC307_0915 [Synechococcus sp. RCC307]
gi|147850324|emb|CAK27818.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 1915
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 66/196 (33%), Gaps = 19/196 (9%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGY 256
+ + +Y Y GG D G N I+LN+ W + G
Sbjct: 1718 NGQNGDDKLYGGNGNDVMYGGNHNDYLHGGSGT-DTAQFSGRSNRINLNSTRWQNTRDGR 1776
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-- 314
++ ++I E+V SGNDVV GN N +GNDV +G SG D +
Sbjct: 1777 DRLISI------ENVNAGSGNDVVTGNRGANTLNGQNGNDVLNGGSGNDKLVGGQGNDKL 1830
Query: 315 -----LYKIYRFENAIIVYDANEHKQDFLSDV----ERLRFADQCIDSVNVKQRSILEYT 365
K++ + D + D +R++ R+ Y
Sbjct: 1831 VGGQGNDKLWGQGGRDTFVLSEGAGYDRIMDFRNGQDRIQIGSGVDSLRIKNHRNGHAYV 1890
Query: 366 ASYEDLIQVIGQDVFE 381
DL+ V+ +
Sbjct: 1891 YEGRDLMAVVNGAAGD 1906
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 58/173 (33%), Gaps = 24/173 (13%)
Query: 227 GDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
GDD + D G N I+LNT W + G + IE+V SGND+V
Sbjct: 1654 GDDTINGGSGRDTAQFSGRNNCINLNTTKWQNTGDGRDRLI-----SIENVNAGSGNDIV 1708
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFF---------YYAPSYLYKIYRFENAIIVYDAN 331
GN + N +G+D G +G D + + + + N I +
Sbjct: 1709 KGNRSANTLNGQNGDDKLYGGNGNDVMYGGNHNDYLHGGSGTDTAQFSGRSNRINLNSTR 1768
Query: 332 E----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+D L +E + + + L + L G D
Sbjct: 1769 WQNTRDGRDRLISIENVNAGSGNDVVTGNRGANTLNGQNGNDVLNGGSGNDKL 1821
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 15/197 (7%)
Query: 197 APKGSLGNNIYKIEV-QQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTESWSSIG 254
A + G + K + + F +TI S G +D +D + +L ++ S I
Sbjct: 1227 AITLNKGGTVSKGSAGKDTFTDFFETIRASSGSNDWIDGSGGTTASIDANLASQKLS-IK 1285
Query: 255 GYEKNMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G T+ E+V G++ ND + G+S NN+ GND G D+ + +
Sbjct: 1286 GIPGLGTVNTTVQNFENVRGTNYNDTIAGDSGNNILIGDGGNDTISTGGGRDSVDAGSGN 1345
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + S + + F S+ + L D
Sbjct: 1346 DTITVTSAQGG-------SSSVTTGSGQDTVVFTKGYYQSLFYGGAAALT----ITDFTT 1394
Query: 374 VIGQDVFESMKHFYEFG 390
+G D+ + + F +
Sbjct: 1395 GVGGDLLDLSQLFRDVA 1411
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 78/231 (33%), Gaps = 19/231 (8%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY-KIEVQQKDSPFIQTIY 223
YF ++ +FG DI+ + G + + + F + +
Sbjct: 755 YFFGENGSSKYTFG-----GGYDIMDYSSMSAPITLVRGGKVDKGVNGTDSFADFPEELI 809
Query: 224 DSGG-DDLLDLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ +D +D GG +D+N + S S + +I E V GS D
Sbjct: 810 ATSSLNDWVDGLTGGGKIASLDVNLAADSLKVSGIPEIGSASITIRD-FEHVKGSDTADT 868
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA--------N 331
++GN+ N + + GNDV DG +G D + K +++ D
Sbjct: 869 MVGNALANKLYGNGGNDVIDGGAGNDDIQGGTGDDVLKGGTGNDSLSGGDGADRIDGGTG 928
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + + + +YT+ Y D+ V G V +
Sbjct: 929 NDTVDCGGGNDVMLASVGNDTCTFGSGYDTADYTSFYRDITLVKGGSVNKG 979
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 1/110 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + G +G+DV+ G + N+ G D DG +G DT
Sbjct: 878 LYGNGGNDVIDGGAGNDDIQGGTGDDVLKGGTGNDSLSGGDGADRIDGGTGNDTVDCGGG 937
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + + N + + D+ S + +
Sbjct: 938 NDV-MLASVGNDTCTFGSGYDTADYTSFYRDITLVKGGSVNKGGLGTDTF 986
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 33/90 (36%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ ++ E + + +++ G GND + G ++ + +G+D G G D
Sbjct: 1503 GFDTVEAKEGDDRLYGGYGNDTLNGGDGNDEIYGEMDDDKLYGGNGDDRLTGGDGADYLD 1562
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
S Y + + I+ + +
Sbjct: 1563 GGNGSDTYIVDDERDTIVDSGTDSGIDTVI 1592
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 14/151 (9%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
KG LG + +K V+ + +D +D + ++L+++S + G
Sbjct: 976 VNKGGLGTDTFKDFVESIKATTR-------ANDWIDASTGNTANVDVNLSSQSLK-VSGL 1027
Query: 257 EKNMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
K T + E V GS GND + G+S N+ + GNDV S+G DT+ + +
Sbjct: 1028 PKVGTFTFNVQNFEHVKGSEGNDRIQGDSKANILIGNGGNDVMTASAGNDTYTFGSGYDT 1087
Query: 316 YKIYRFENAI-----IVYDANEHKQDFLSDV 341
+I D +D +D
Sbjct: 1088 IDYSSLGQSIRLVRGGTVDKGGQGKDTFTDF 1118
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 18/211 (8%)
Query: 193 KIYGAPKG---SLGNNIYKIEVQQKDSPFI-----QTIYDSG---GDDLLDLTLIGGVKN 241
K+YG + G+ ++ +I TI DSG G D + +
Sbjct: 1542 KLYGGNGDDRLTGGDGADYLDGGNGSDTYIVDDERDTIVDSGTDSGIDTVIYRYYSKSYS 1601
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ +M I + S+ ND++ G + N++ + G+D +G
Sbjct: 1602 LTKGIEKIVLPTSVKLSSMKITGNASHNSIETGDKNDILEGGAGNDLLNAALGDDTINGG 1661
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
SG DT + + + + +D L +E + + +
Sbjct: 1662 SGRDTAQFSGRNNCINLN-----TTKWQNTGDGRDRLISIENVNAGSGNDIVKGNRSANT 1716
Query: 362 LEYTASYEDLIQVIGQDVFESMKH--FYEFG 390
L + L G DV H + G
Sbjct: 1717 LNGQNGDDKLYGGNGNDVMYGGNHNDYLHGG 1747
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 10/135 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHT 266
+ +Y +GG+D++D GG N D+ + + G N +++
Sbjct: 864 DTADTMVGNALANKLYGNGGNDVID----GGAGND-DIQGGTGDDVLKGGTGNDSLSGGD 918
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G +GND V N+V S GND SG DT Y + + + +
Sbjct: 919 GADRIDGGTGNDTVDCGGGNDVMLASVGNDTCTFGSGYDTADYTSFYRDITLVKGGS--- 975
Query: 327 VYDANEHKQDFLSDV 341
+ D D
Sbjct: 976 -VNKGGLGTDTFKDF 989
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 10/145 (6%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTV-IESVVGSSGNDVVI 281
DSG D +D GG ++ + + S +I T++ + E++ GS D +
Sbjct: 1127 DSG--DWIDGITGGGAIASLNADLANQSLTISNLPGIGTVSVNVQNFENIDGSDTTDRLK 1184
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-----NEHKQD 336
G+S +N+ + GNDV S+G DT+ + + S AI + +D
Sbjct: 1185 GDSGSNILRGNGGNDVMLASAGNDTYTFGSGSDTIDYSSLGQAITLNKGGTVSKGSAGKD 1244
Query: 337 FLSD-VERLRFADQCIDSVNVKQRS 360
+D E +R + D ++ +
Sbjct: 1245 TFTDFFETIRASSGSNDWIDGSGGT 1269
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 7/123 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G ++ I E + +G D V ++ + GND +G G D +
Sbjct: 1480 IQGTNRSEKITGSDEGEWIYAYNGFDTVEAKEGDDRLYGGYGNDTLNGGDGNDEIYGEMD 1539
Query: 313 SY------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ D ++ D ER D DS + Y+
Sbjct: 1540 DDKLYGGNGDDRLTGGDGADYLDGGNGSDTYIVDDERDTIVDSGTDS-GIDTVIYRYYSK 1598
Query: 367 SYE 369
SY
Sbjct: 1599 SYS 1601
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 58/178 (32%), Gaps = 32/178 (17%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
IY G D + D L GG N ++ G + N I + + G +G
Sbjct: 1498 IYAYNGFDTVEAKEGDDRLYGGYGND---------TLNGGDGNDEIYGEMDDDKLYGGNG 1548
Query: 277 NDVVIGNSANNVFFESSGNDV----------FDGS--SGLDTFFYYAPSYLYKIYRFENA 324
+D + G + +G+D D SG+DT Y S Y + +
Sbjct: 1549 DDRLTGGDGADYLDGGNGSDTYIVDDERDTIVDSGTDSGIDTVIYRYYSKSYSLTKGIEK 1608
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I++ + + ++ + ILE A + L +G D
Sbjct: 1609 IVLPTSVKLSSMKITGNASHN------SIETGDKNDILEGGAGNDLLNAALGDDTING 1660
>gi|307945682|ref|ZP_07661018.1| Na-Ca exchanger/integrin-beta4 [Roseibium sp. TrichSKD4]
gi|307771555|gb|EFO30780.1| Na-Ca exchanger/integrin-beta4 [Roseibium sp. TrichSKD4]
Length = 810
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + G G+D++ G + N++ +G D G +G D Y
Sbjct: 69 GNGGNDALVGGMGNDIQFGGEGDDLIKGGAGNDIIKGGAGADTIRGGAGNDVALYDGNRA 128
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
Y I + + +V D N D L +E+L F DQ ++
Sbjct: 129 DYTIMKNGDMTLVIDNNTGATDNLKGIEQLAFTDQSVN 166
>gi|40254544|ref|NP_062698.2| matrix metalloproteinase-16 precursor [Mus musculus]
gi|34785576|gb|AAH57926.1| Matrix metallopeptidase 16 [Mus musculus]
gi|122889875|emb|CAM13981.1| matrix metalloproteinase 16 [Mus musculus]
gi|123229799|emb|CAM18851.1| matrix metalloproteinase 16 [Mus musculus]
gi|148673638|gb|EDL05585.1| matrix metallopeptidase 16, isoform CRA_a [Mus musculus]
gi|148673640|gb|EDL05587.1| matrix metallopeptidase 16, isoform CRA_a [Mus musculus]
Length = 607
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|148242012|ref|YP_001227169.1| hypothetical protein SynRCC307_0913 [Synechococcus sp. RCC307]
gi|147850322|emb|CAK27816.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 666
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 67/206 (32%), Gaps = 17/206 (8%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++YG + +Y Y GG D + KN I+LNT W +
Sbjct: 458 RVYGRNGH---DKLYGGRRNDVMYGGNHNDYLHGGSGR-DTAVFSSRKNRINLNTTKWQN 513
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + IE+V GND+V GN +N +G DV +G G D
Sbjct: 514 TGDGRDRL-----VSIENVNAGGGNDIVTGNKFSNRLNGQNGRDVLNGGGGNDVLLGGGG 568
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + ++ D L D + S I ++ + +
Sbjct: 569 NDQLRGGSGNDRLV----GNQGNDHLWGG---AGRDTFVLSEGSGYDRIRDFRDGVDRIQ 621
Query: 373 QVIGQDVFESMKHFYEFGL-SEGRDI 397
G D H EGRD+
Sbjct: 622 VGAGVDNLRIKNHRNGHAYVYEGRDL 647
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 73/266 (27%), Gaps = 25/266 (9%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G + Y + VDN Y+ S+ S + D F G
Sbjct: 333 AGEHKNVYTISAVDNRYQMASW-----SNWDNPSGGDDVDFAAPGV-------------G 374
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G ++ + +P + G D+ + S+
Sbjct: 375 VLSYYQGGSLAYLSGTSMAAPHAAGLLLMGNVKAGDMVKANRAGYADPFALGTTSTTPKP 434
Query: 257 EKNMTIAQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I + + + +VG GND V G + ++ + NDV G + D +
Sbjct: 435 PQQGLILKGSHRNDRLVGRGGNDRVYGRNGHDKLYGGRRNDVMYGGNHNDYLHGGSGRDT 494
Query: 316 YKIYRFENAIIVYDANE----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+N I + +D L +E + K + L + L
Sbjct: 495 AVFSSRKNRINLNTTKWQNTGDGRDRLVSIENVNAGGGNDIVTGNKFSNRLNGQNGRDVL 554
Query: 372 IQVIGQDV--FESMKHFYEFGLSEGR 395
G DV G R
Sbjct: 555 NGGGGNDVLLGGGGNDQLRGGSGNDR 580
>gi|20141616|sp|Q9WTR0|MMP16_MOUSE RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
Full=Membrane-type matrix metalloproteinase 3;
Short=MT-MMP 3; Short=MTMMP3; AltName:
Full=Membrane-type-3 matrix metalloproteinase;
Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
gi|10444090|gb|AAG17704.1|AF282844_1 matrix metalloproteinase 16 [Mus musculus]
Length = 607
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 HS--------DIKFIS------------SNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
DI I G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|172055141|ref|YP_001806468.1| hypothetical protein cce_5056 [Cyanothece sp. ATCC 51142]
gi|171701422|gb|ACB54402.1| hypothetical protein cce_5056 [Cyanothece sp. ATCC 51142]
Length = 284
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
FD +LY+ SY DL FG D AA HY+ G EGR+ F A +Y+ ++ D+ + +
Sbjct: 200 NFDEHLYIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFNAAQYLENYGDIRDTYG 259
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF 480
DL HF G EGR
Sbjct: 260 LNADL---ATKHFIANGFAEGRT 279
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFD 400
+ L +Q V Y ASY DLIQ G D ++ H+ G +EGRD F+
Sbjct: 184 QVLDLHNQNQLGGIVDNFDEHLYIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFN 243
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ YL +Y D+R+ +G + A +H+I +G EGR
Sbjct: 244 AAQYLENYGDIRDTYGLNADLATKHFIANGFAEGRT 279
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
G FD +LY+ SY DL FG D AA HY+ G EGR+ F A +Y+ ++ D+
Sbjct: 196 GIVDNFDEHLYIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFNAAQYLENYGDIR 255
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRS 564
+ + DL HF G+ EGR+
Sbjct: 256 DTYGLNADLAT---KHFIANGFAEGRT 279
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR-SITFNPDLYLTSYDDLW 580
D F YIAS+ DLI AF + A DH+ G EGR FN YL +Y D+
Sbjct: 199 DNFDEHLYIASYGDLIQAFGYDGE---AALDHYLMMGATEGRDQHRFNAAQYLENYGDIR 255
Query: 581 NVFGSDRSAAAQHYITHGMKEGRA 604
+ +G + A +H+I +G EGR
Sbjct: 256 DTYGLNADLATKHFIANGFAEGRT 279
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDLR 496
D F YIAS+ DLI AF + DH+ G EGR F++ YL +Y D+R
Sbjct: 199 DNFDEHLYIASYGDLIQAFGYDGE---AALDHYLMMGATEGRDQHRFNAAQYLENYGDIR 255
Query: 497 NVFGSDRGAAARHYITHGVKEGRN 520
+ +G + A +H+I +G EGR
Sbjct: 256 DTYGLNADLATKHFIANGFAEGRT 279
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG-ISGMQF-KSVMNLSEKSR 623
F+ LY+ SY DL FG D AA HY+ G EGR + Q+ ++ ++ +
Sbjct: 200 NFDEHLYIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFNAAQYLENYGDIRDTYG 259
Query: 624 DKADLSL 630
ADL+
Sbjct: 260 LNADLAT 266
>gi|221122763|ref|XP_002164594.1| PREDICTED: similar to LOC100127631 protein [Hydra magnipapillata]
Length = 359
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 71/198 (35%), Gaps = 49/198 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS- 74
+LL W + YK + + + ++ R A WS V LTF E +
Sbjct: 92 YLLWHTKWPTKTLTYKFENTGADLPAKTV-------KDTVRKAFNMWSSVTPLTFTEVTE 144
Query: 75 --IHSDIKFISSNNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNA 124
H +I F S +G ++FD+ + W +GT L A
Sbjct: 145 RRGHINIGFYSGTHGDGGDFFGPGGTLAHAFYPQNGNLHFDENENWVVN-QRGTDLLEIA 203
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCAT 182
+HEIGHA+G+ H S ++M +YF + ++
Sbjct: 204 VHEIGHAIGIQHS-------------------SIRGTIMFPTYFGYRSNLQ--------- 235
Query: 183 PMVSDIVAVQKIYGAPKG 200
DI AVQ +YG G
Sbjct: 236 LHDDDIKAVQALYGVGTG 253
>gi|149045489|gb|EDL98489.1| matrix metalloproteinase 16, isoform CRA_a [Rattus norvegicus]
gi|149045490|gb|EDL98490.1| matrix metalloproteinase 16, isoform CRA_a [Rattus norvegicus]
Length = 607
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|158520629|ref|YP_001528499.1| hemolysin-type calcium-binding region [Desulfococcus oleovorans Hxd3]
gi|158509455|gb|ABW66422.1| Hemolysin-type calcium-binding region [Desulfococcus oleovorans Hxd3]
Length = 12741
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 12/146 (8%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--SIGGYEKNMTI 262
++ ++ I+ I G + +ID T + + Y +T+
Sbjct: 1247 SVTDGASTLDNADIIEGIVGGSGSNTFAFEDQADFAGFIDGGTGTGNTLDYSAYTTGVTV 1306
Query: 263 ------AQHTV----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
A T I+++ G SG+D + G+ N GND G G DT A
Sbjct: 1307 GLADVTATGTTGVDNIQNITGGSGDDTLTGDDQANTITGGDGNDTITGGGGADTLSGGAG 1366
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
Y + + + +A D L
Sbjct: 1367 DDTYVMTNDGATVTITEAAAAGTDTL 1392
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 18/173 (10%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNMTIAQHTV 267
+ I +GG L + +G DL + + ++ A T
Sbjct: 1115 NGTNNGINISDTAGGAGNLTIADLGTSTAAADLGIAGTGAGALVAGTVLVAPVSTAHFTG 1174
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVF-------------DGSSGLDTFFYYAPSY 314
I + G +G D++IGNS +NV G D + G+ G D + A +
Sbjct: 1175 ISNAAGGAGADLLIGNSQDNVLDGGGGGDTYRFAAGWGSDKIVDYGTDGSDVLDFSAVAS 1234
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + D +E + Q +
Sbjct: 1235 NLAVTVHADGTVSVTDGASTLDNADIIEGIVGGSGSNTFAFEDQADFAGFIDG 1287
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 62/425 (14%), Positives = 116/425 (27%), Gaps = 90/425 (21%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS---- 121
D+T T+ +I+ I+ +G D + D D G G T+
Sbjct: 1309 ADVTATGTTGVDNIQNITGGSGDDTLTGDDQANTI-TGGDGNDTITGGGGADTLSGGAGD 1367
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ + +G D+ S + ++ ++
Sbjct: 1368 DTYV------------MTNDGATVTITEAAAAGTDTLDY---SEWGAPVTVNLSTGTAPG 1412
Query: 182 TPMVSDI-VAVQKIYGAP-KGSLGNNIYKI-EVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
T V++I A+ + G+ G++ + + D+ T DS D LD + +
Sbjct: 1413 TSGVNNIEQAIGTRFADTLAGTTGDDTFVFHDGWGTDTVTDPTATDS---DTLDFSAVTA 1469
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV-----IGN---------- 283
+ T + S G +A IE++ G G+D GN
Sbjct: 1470 ALTFTFTGTGAVSVSDGTSALNNVAN---IENLTGGKGDDHFVFADNWGNYTITSAGDVD 1526
Query: 284 --------------------------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N S G D G SG +TF + +L
Sbjct: 1527 NDTLDFSAVTANLTFTIHSDGTVSVTDGTNTLGASGGIDNIVGGSGTNTFVFEDQGFLNA 1586
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ D + DV + +++ + + + ++
Sbjct: 1587 YIDGGTGTAILDYSACTTAIAVDVSNMDVTVTRTVDGAAVTTTLIGSASGLKGINRIDAV 1646
Query: 378 DVFESMKHFYEFGLSEG-------------------RDITFDSYLYLGSYDDLRNVFGSD 418
S G E R+ITF + L + D + F
Sbjct: 1647 IGGTSAGDTLT-GFEEDTAWTLSGENAGSVAGGTTLRNITFSGFENLAGHADHDDTFTIQ 1705
Query: 419 RGAAA 423
+
Sbjct: 1706 AAGSL 1710
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 2/127 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + TI+ G D + + + T + + + A
Sbjct: 10850 NYQSTGGNMAGGITIWSGTGGDTIAVDSTHRTDGVRTITTLNTNEGNDSVTVLLDADTDG 10909
Query: 268 IESVVGSSGNDVVIGNSANN--VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V +G+D V G++++ V F G D G SG D F Y+ E
Sbjct: 10910 FFVVNAQAGDDTVDGSASSRSLVIFGGDGADEIYGGSGDDIVFGDQGRVYYRNETGEVVT 10969
Query: 326 IVYDANE 332
+ +
Sbjct: 10970 SLGNGTP 10976
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 48/172 (27%), Gaps = 14/172 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ I + I G D + + L + G + +
Sbjct: 12201 GDDTITITGDGNNH-----ILGGMGSDTIGTEATTAGTTDVILGDNGRVTYDGPVGGLEL 12255
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++ ++ + + + G+D + + F G D +G Y
Sbjct: 12256 SE--IVSTEISTGGDDEITTGDGDKHIFGGYGVDTITAGAGDHVVMGDNGVVEYDTDGAP 12313
Query: 323 NAIIVYD-------ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ D + D D + + F D + + + + + +
Sbjct: 12314 KVLETTDTADHPEYGGDDVIDITGDGDNIVFGGMGSDHITTRNGTDVIFGDN 12365
Score = 42.0 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 58/222 (26%), Gaps = 44/222 (19%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG-------DDLLDLTLIGGVKNYIDLNT 247
YG + G V D+ ++ YD+ G D D GG ID+
Sbjct: 12284 YGVDTITAGA---GDHVVMGDNGVVE--YDTDGAPKVLETTDTADHPEYGGDD-VIDITG 12337
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGN-------------------------DVVIG 282
+ + + G + I + + G +G D +
Sbjct: 12338 DGDNIVFGGMGSDHITTRNGTDVIFGDNGRTTYAGPVGGLHLDRLESLLPTSGGPDTIAT 12397
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ G+D + +G D LY + + + D L V
Sbjct: 12398 GNGTKYIIAGFGDDTAETGTGDDILIGDNGVVLYDTNGLPALVYGTNPDVGGDDLLRTV- 12456
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + + A + + G+ E
Sbjct: 12457 -----DGTNIFIGGDGSDTMHGGAGRDAMFGDGGKATLEEGA 12493
Score = 42.0 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D++ N+F G+D G +G D F + + + D
Sbjct: 12448 GGDDLLRTVDGTNIFIGGDGSDTMHGGAGRDAMFGDGGKATLEEGAWR-VLETIDPFIGG 12506
Query: 335 QDFLSD 340
DF+
Sbjct: 12507 NDFIDG 12512
Score = 42.0 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 41/154 (26%), Gaps = 17/154 (11%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A YG G++ I + I G D + + L
Sbjct: 12066 ADHPEYG------GDDTITITGDGNNH-----ILGGMGSDTIGTEATTAGTTDVILGDNG 12114
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + +++ ++ + + + G+DV+ + F G D +G
Sbjct: 12115 RVTYAGDTGALELSE--IVSTEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHVVMG 12172
Query: 310 YAPSYLYKIY----RFENAIIVYDANEHKQDFLS 339
Y E D ++
Sbjct: 12173 DNGVVAYDTDGTPRVLETTDTTDHPEYGGDDTIT 12206
Score = 42.0 bits (97), Expect = 0.37, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 39/155 (25%), Gaps = 19/155 (12%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A YG G++ I + I G D + + L
Sbjct: 11682 ADHPEYG------GDDTITITGDGNNH-----ILGGMGSDTIGTEATTAGTTDVILGDNG 11730
Query: 250 WSSIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G + + + IE + + + G+D + + F G D +G
Sbjct: 11731 RVTYDGPVGGLEL---SGIESTEISTGGDDQITTGDGDKHIFGGFGIDTITAGAGDHVVM 11787
Query: 309 YYAPSYLYKIY----RFENAIIVYDANEHKQDFLS 339
Y E D ++
Sbjct: 11788 GDNGVVAYDTDGTPRVLETTDTTDHPEYGGDDTIT 11822
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 40/155 (25%), Gaps = 19/155 (12%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A YG G++ I + I G D + + L
Sbjct: 11426 ADHPEYG------GDDTITITGDGSNH-----ILGGMGSDTIGTEATTAGTTDVVLGDNG 11474
Query: 250 WSSIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G + + + IE + + + G+DV+ + F G D +G
Sbjct: 11475 RVTYDGPVGGLEL---SGIESTEISTGGDDVITTGDGDKHIFGGYGVDTITAGAGDHVVM 11531
Query: 309 YYAPSYLYKIY----RFENAIIVYDANEHKQDFLS 339
Y E D ++
Sbjct: 11532 GDNGVVSYDTDGAPMVLETTDTADHPEYGGDDTIT 11566
Score = 40.9 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 40/155 (25%), Gaps = 19/155 (12%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A YG G++ I + I G D + + L
Sbjct: 11554 ADHPEYG------GDDTITITGDGSNH-----ILGGMGSDTIGTEATTAGTTDVILGDNG 11602
Query: 250 WSSIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G + + + IE + + + G+DV+ + F G D +G
Sbjct: 11603 RVTYDGPVGGLEL---SGIESTEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHVVM 11659
Query: 309 YYAPSYLYKIY----RFENAIIVYDANEHKQDFLS 339
Y E D ++
Sbjct: 11660 GDNGVVEYDTDGAPRVLETTDTADHPEYGGDDTIT 11694
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 37/142 (26%), Gaps = 13/142 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ I + I G D + + L + G + +
Sbjct: 11945 GDDTITITGDGSNH-----ILGGMGSDTIGTEATTAGTTDVILGDNGRVTYDGPVGGLEL 11999
Query: 263 AQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-- 319
+ IE + + + G+DV+ + F G D +G Y
Sbjct: 12000 ---SGIESTEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHVVMGDNGVVEYDTDGA 12056
Query: 320 --RFENAIIVYDANEHKQDFLS 339
E D ++
Sbjct: 12057 PRVLETTDTADHPEYGGDDTIT 12078
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 40/155 (25%), Gaps = 19/155 (12%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A YG G++ I + I G D + + L
Sbjct: 11298 ADHPEYG------GDDTITITGDGNNH-----ILGGMGSDTIGTEATTAGTTDVILGDNG 11346
Query: 250 WSSIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G + + + IE + + + G+D + + F G D +G
Sbjct: 11347 RVTYTGATGAL---EPSEIESTEISTGGDDQITTGDGDKHIFGGYGVDTITAGAGDHVVM 11403
Query: 309 YYAPSYLYKIYRF----ENAIIVYDANEHKQDFLS 339
Y I E D ++
Sbjct: 11404 GDNGVVEYDIDGAPLILETTDTADHPEYGGDDTIT 11438
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 37/142 (26%), Gaps = 13/142 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ I + I G D + + L + G + +
Sbjct: 11817 GDDTITITGDGNNH-----ILGGMGSDTIGTEATTAGTTDVILGDNGRVTYDGPVGGLEL 11871
Query: 263 AQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-- 319
+ IE + + + G+DV+ + F G D +G +
Sbjct: 11872 ---SGIESTEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHVVMGDNGVVAHDTDGT 11928
Query: 320 --RFENAIIVYDANEHKQDFLS 339
E D ++
Sbjct: 11929 PRVLETTDTTDHPEYGGDDTIT 11950
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 35/141 (24%), Gaps = 11/141 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ I + I G D + + L + G + +
Sbjct: 11177 GDDTITITGDGNNH-----ILGGMGSDTIGTEATTAGTTDVILGDNGRVTYAGDTGALEL 11231
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--- 319
++ E+ G G+D + + F G D +G Y
Sbjct: 11232 SEIVSAETSTG--GDDQITTGDGDKHIFGGYGVDTITAGAGDHVVMGDNGVVEYDTDGAP 11289
Query: 320 -RFENAIIVYDANEHKQDFLS 339
E D ++
Sbjct: 11290 LVLETTDTADHPEYGGDDTIT 11310
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 10/133 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIG 282
GG LD + +DL + + + G N + I + G + + G
Sbjct: 515 GGSTTLDYSAYTSAVA-VDLTAGTATGVTGGISNFSNIVGGAGNDI--LTGDEYANEITG 571
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S +++ G+D G G D F + I + D + D E
Sbjct: 572 GSGSDIIDGGIGDDTLTGGIGNDVFRFSDDWGFDAITDGDVGANTLDFSNATADL----E 627
Query: 343 RLRFADQCIDSVN 355
+ AD + +
Sbjct: 628 VIFAADGTLSVDD 640
>gi|4996355|dbj|BAA78420.1| membrane-type-3 matrix metalloproteinase [Mus musculus]
Length = 607
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|240269310|gb|ACS52520.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269312|gb|ACS52521.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269314|gb|ACS52522.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269316|gb|ACS52523.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269318|gb|ACS52524.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269320|gb|ACS52525.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269322|gb|ACS52526.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269324|gb|ACS52527.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269326|gb|ACS52528.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269328|gb|ACS52529.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269330|gb|ACS52530.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269332|gb|ACS52531.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269334|gb|ACS52532.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269336|gb|ACS52533.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269338|gb|ACS52534.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269340|gb|ACS52535.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269342|gb|ACS52536.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269344|gb|ACS52537.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269346|gb|ACS52538.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269348|gb|ACS52539.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269350|gb|ACS52540.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269352|gb|ACS52541.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269354|gb|ACS52542.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269356|gb|ACS52543.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269360|gb|ACS52545.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269362|gb|ACS52546.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269364|gb|ACS52547.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269366|gb|ACS52548.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269368|gb|ACS52549.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269370|gb|ACS52550.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269372|gb|ACS52551.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269374|gb|ACS52552.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269376|gb|ACS52553.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269378|gb|ACS52554.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269380|gb|ACS52555.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269382|gb|ACS52556.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269384|gb|ACS52557.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269386|gb|ACS52558.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269388|gb|ACS52559.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269392|gb|ACS52561.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269394|gb|ACS52562.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269396|gb|ACS52563.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269398|gb|ACS52564.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269400|gb|ACS52565.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269402|gb|ACS52566.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269404|gb|ACS52567.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269406|gb|ACS52568.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269408|gb|ACS52569.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269410|gb|ACS52570.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269412|gb|ACS52571.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269414|gb|ACS52572.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269416|gb|ACS52573.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269418|gb|ACS52574.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269420|gb|ACS52575.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269422|gb|ACS52576.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269424|gb|ACS52577.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269426|gb|ACS52578.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269428|gb|ACS52579.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269430|gb|ACS52580.1| putative matrix metalloproteinase [Anopheles merus]
gi|240269432|gb|ACS52581.1| putative matrix metalloproteinase [Anopheles quadriannulatus]
gi|240269434|gb|ACS52582.1| putative matrix metalloproteinase [Anopheles melas]
Length = 210
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 49/203 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---E 72
+ L+ W + Y+ E +E+A+ A G WS+ DL F
Sbjct: 35 YALQGSRWKVKDLTYRISKYPRRL------ERTAVDKEIAK-AFGVWSEYTDLRFTPKKT 87
Query: 73 TSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++H DI+F + +G Y Y + +FD A+ W +GT L
Sbjct: 88 GAVHIDIRFEENEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQV 147
Query: 124 ALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + + G D + DS
Sbjct: 148 AAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFRLDS------------------------ 183
Query: 182 TPMVSDIVAVQKIYGAPKGSLGN 204
DI +Q +YG + G
Sbjct: 184 ----DDIQGIQTLYGTKTRNPGG 202
>gi|240269358|gb|ACS52544.1| putative matrix metalloproteinase [Anopheles gambiae]
Length = 210
Score = 84.4 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 69/203 (33%), Gaps = 49/203 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---E 72
+ L+ W + Y+ E +E+A+ A WS+ DL F
Sbjct: 35 YALQGSRWKVKDLTYRISKYPRRL------ERTAVDKEIAK-AFXVWSEYTDLRFTPKKT 87
Query: 73 TSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++H DI+F + +G Y Y + +FD A+ W +GT L
Sbjct: 88 GAVHIDIRFEENEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQV 147
Query: 124 ALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + + G D + DS
Sbjct: 148 AAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFRLDS------------------------ 183
Query: 182 TPMVSDIVAVQKIYGAPKGSLGN 204
DI +Q +YG + G
Sbjct: 184 ----DDIQGIQTLYGTKTRNPGG 202
>gi|157278499|ref|NP_001098351.1| membrane type-5 matrix metalloproteinase [Oryzias latipes]
gi|13122278|dbj|BAB32880.1| membrane type-5 matrix metalloproteinase [Oryzias latipes]
Length = 546
Score = 84.4 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 62/208 (29%), Gaps = 55/208 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D Q R A W V L+F+E
Sbjct: 50 YALTGQKWREKKISYSISNYTPKVGQKDT-------QRAIRQAFSVWQMVTPLSFQEVPY 102
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYF-MEINFDKADVWRYG- 113
+DI G++ + + +FD + W G
Sbjct: 103 SEIKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGAGIGGDTHFDSDEPWTLGN 162
Query: 114 -IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 163 PSSDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMDT 203
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKG 200
D + D+ +QKIYG P
Sbjct: 204 RDFQ------LPLDDLQGIQKIYGVPTA 225
>gi|3182966|sp|O35548|MMP16_RAT RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
Full=Membrane-type matrix metalloproteinase 3;
Short=MT-MMP 3; Short=MTMMP3; AltName:
Full=Membrane-type-3 matrix metalloproteinase;
Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
gi|2424975|dbj|BAA22224.1| MT3-MMP [Rattus rattus]
Length = 607
Score = 84.4 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 HS--------DIKFIS------------SNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
DI I G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|296445691|ref|ZP_06887645.1| glycosyl transferase group 1 [Methylosinus trichosporium OB3b]
gi|296256794|gb|EFH03867.1| glycosyl transferase group 1 [Methylosinus trichosporium OB3b]
Length = 2009
Score = 84.4 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 54/317 (17%), Positives = 98/317 (30%), Gaps = 71/317 (22%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR---DITFDSYLYLGSYDDLRNVF 415
S L A Y + + H+ E G++E R FD+ Y Y ++
Sbjct: 681 ASPLFDEAWYAKMYMSRDKSGLSPAAHYLERGVAE-RLFPHPLFDAEWYRERYMSTKSA- 738
Query: 416 GSDRGAAARHYITHG-----------------------------------VKE-GRNPDA 439
H++ G E G +P
Sbjct: 739 ----EPPFVHFLREGVKREYVAHPLFDPAWFARRYQRKGLVDCMIFFQKFAFECGLDPHP 794
Query: 440 -FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLR 496
F + Y ++ ++G + G + GR+ FD Y+ +Y +
Sbjct: 795 LFDSKWYGETYPKTFREG-------RIGVHDYMETGAQRGRWPNPLFDPAYYVRTYKEQI 847
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
H+I G +G NP+ F + Y A + + H+
Sbjct: 848 E----PGTNPLAHFIEQGSDDGLNPNPLFSSAWYRAVNPGVAAENWIP-------LAHYL 896
Query: 556 NFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFK 613
+ G + G +++F+ YL DL S + A + G E + Q+K
Sbjct: 897 HVGGKLGLDPNLSFSTKSYLAENPDLDLAKESALAHALR--KRSGRGESTLSTETRPQWK 954
Query: 614 SVMNLSEKSRDKADLSL 630
S + + + D++L
Sbjct: 955 KAPLASSERQSRRDVAL 971
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 11/119 (9%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT- 398
V Y +Y++ I+ + HF E G +G +
Sbjct: 815 GVHDYMETGAQRGRWPNPLFDPAYYVRTYKEQIE----PGTNPLAHFIEQGSDDGLNPNP 870
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
F S Y + ++ HY+ G K G +P+ +F Y+A + DL A
Sbjct: 871 LFSSAWYRAVNPGV----AAENWIPLAHYLHVGGKLGLDPNLSFSTKSYLAENPDLDLA 925
>gi|301626287|ref|XP_002942325.1| PREDICTED: matrix metalloproteinase-24-like [Xenopus (Silurana)
tropicalis]
Length = 592
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 65/209 (31%), Gaps = 55/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 103 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEIPY 155
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
+DI G++ + + +FD + W G
Sbjct: 156 SEIKNERKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 215
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 216 SNHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 256
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ P D+ +QKIYG P +
Sbjct: 257 HNFKL-----PQ-DDLQGIQKIYGPPAET 279
>gi|163850802|ref|YP_001638845.1| glycosyl transferase group 1 [Methylobacterium extorquens PA1]
gi|163662407|gb|ABY29774.1| glycosyl transferase group 1 [Methylobacterium extorquens PA1]
Length = 1303
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 83/232 (35%), Gaps = 31/232 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------------- 439
GR FD Y Y DL + G + RHY+ HG EGR P+A
Sbjct: 30 GRGGAFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVAALEAEGGAL 88
Query: 440 ---FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F Y A ++DL +H+ FG EGR D + Y+ +
Sbjct: 89 PSDFIPEHYRALYDDLAGLTEPW-----QLSEHYLRFGRFEGRAHGADLSAFEQEYERML 143
Query: 497 NVFGS-DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN-AFADAPDLVQAGKDHF 554
+ + A ++ V P A+ L + L A P G F
Sbjct: 144 ASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLAHPPASRMEGLVAF 203
Query: 555 SNFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G E I+ F+P Y ++ D + G+ + +H++ G+++G
Sbjct: 204 LTEGVERLAPISLRLRFDPHFYRSNNPD--SSVGASDADLYRHWLGKGIQKG 253
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/297 (16%), Positives = 82/297 (27%), Gaps = 90/297 (30%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------ 398
+F + ++ Y Y DL ++G + +H+ + G +EGR
Sbjct: 21 QFGRRISEAGRGGAFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVA 79
Query: 399 ------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
F Y YDDL + ++ + HY+ G EGR A +
Sbjct: 80 ALEAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGA-DLSAFE 136
Query: 447 ASHEDLINAFAD-APDLVQVGKDHFSNFGC------------------EEG--------- 478
+E ++ + A H EG
Sbjct: 137 QEYERMLASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLAHPPASR 196
Query: 479 -------------RFVT------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK--- 516
R FD + Y + D + G+ RH++ G++
Sbjct: 197 MEGLVAFLTEGVERLAPISLRLRFDPHFYRSNNPD--SSVGASDADLYRHWLGKGIQKGE 254
Query: 517 -------------EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
E R P++F Y L P HF + G++
Sbjct: 255 PASEAAALVRLLGEERYPESFDETAY---RSLLTEGVVPPPPGRLNALRHFIDTGFQ 308
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 44/132 (33%), Gaps = 26/132 (19%)
Query: 512 THGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--- 566
G + E AF Y + DL D + K H+ + G EGR
Sbjct: 21 QFGRRISEAGRGGAFDPDFYRRYYPDLAILG----DESKVLKRHYLDHGRAEGRFPNAAA 76
Query: 567 ---------------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
F P+ Y YDDL + ++ ++HY+ G EGRA G
Sbjct: 77 LVAALEAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGADLSA 134
Query: 612 FKSVMNLSEKSR 623
F+ S
Sbjct: 135 FEQEYERMLASG 146
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 27/173 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG----------------RNPDAFKA 442
FD + Y + D + G+ RH++ G+++G R P++F
Sbjct: 220 FDPHFYRSNNPD--SSVGASDADLYRHWLGKGIQKGEPASEAAALVRLLGEERYPESFDE 277
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY---LGSYDDLRNVF 499
Y + L P HF + G + L + +
Sbjct: 278 TAYRSL---LTEGVVPPPPGRLNALRHFIDTGFQLWELEPVRQACSAQLLERIGEYHLLR 334
Query: 500 GSDRGA--AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQA 549
G+ A A + G+ GR AL + D AF +A D+ A
Sbjct: 335 GNAVEAKEAFDRALRGGLVSGRLHHRRGDALLRLNRTNDAARAFVNAADVPGA 387
>gi|114620827|ref|XP_001136415.1| PREDICTED: matrix metalloproteinase 16 isoform 1 [Pan troglodytes]
Length = 624
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 137 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 189
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 190 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 249
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 250 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 290
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 291 DNFK------LPNDDLQGIQKIYGPP 310
>gi|13122276|dbj|BAB32879.1| membrane type-5 matrix metalloproteinase-variant [Oryzias latipes]
Length = 431
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 62/208 (29%), Gaps = 55/208 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D Q R A W V L+F+E
Sbjct: 50 YALTGQKWREKKISYSISNYTPKVGQKDT-------QRAIRQAFSVWQMVTPLSFQEVPY 102
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYF-MEINFDKADVWRYG- 113
+DI G++ + + +FD + W G
Sbjct: 103 SEIKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGAGIGGDTHFDSDEPWTLGN 162
Query: 114 -IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 163 PSSDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMDT 203
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKG 200
D + D+ +QKIYG P
Sbjct: 204 RDFQ------LPLDDLQGIQKIYGVPTA 225
>gi|2662306|dbj|BAA23742.1| membrane-type matrix metalloproteinase 3 [Homo sapiens]
Length = 607
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|240269390|gb|ACS52560.1| putative matrix metalloproteinase [Anopheles gambiae]
Length = 210
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 49/203 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---E 72
+ L+ W + Y+ E +E+A+ A G WS+ DL F
Sbjct: 35 YALQGSRWKVKDLTYRISKYPRRL------ERTAVDKEIAK-AFGVWSEYTDLRFTPKKT 87
Query: 73 TSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++H DI+F + +G Y Y + +FD A+ W +GT L
Sbjct: 88 GAVHIDIRFEENEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQV 147
Query: 124 ALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + + G D + DS
Sbjct: 148 AAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFRLDS------------------------ 183
Query: 182 TPMVSDIVAVQKIYGAPKGSLGN 204
DI +Q +YG + G
Sbjct: 184 ----DDIXGIQTLYGTKTRNPGG 202
>gi|172356221|ref|NP_001116500.1| matrix metalloproteinase 1 isoform 2 [Bombyx mori]
gi|169730454|gb|ACA64805.1| matrix metalloproteinase variant 2 [Bombyx mori]
Length = 538
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 91/270 (33%), Gaps = 37/270 (13%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+ R + L+ W + YK + + E++ E+A+ A WS D
Sbjct: 120 FGESRAKRYALQGSRWRVKNLTYKISKYPSR---LNRAEVDA---ELAK-AFSVWSDYTD 172
Query: 68 LTFEET---SIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIG 115
LTF + +H +I+F +G Y Y + +FD A++W
Sbjct: 173 LTFTQKRSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEMWSINSR 232
Query: 116 KGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+GT L A HE GH+LGL H Y G P + +D D + S +
Sbjct: 233 RGTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYDPAFQLDQDDVQG-----IQSLYG 287
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ G P V Q P + I S F+ G
Sbjct: 288 HKTQTDIGGGGGGLIPSVPRATTQQPSAEDPALCADPRVDTIFNSADGSTFVF-----KG 342
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
D LT G Y L + +W + G
Sbjct: 343 DHYWRLTEDGVAAGYPRLISRAWPGLPGNI 372
>gi|296226868|ref|XP_002759098.1| PREDICTED: matrix metalloproteinase-16 [Callithrix jacchus]
Length = 607
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|149637115|ref|XP_001506645.1| PREDICTED: similar to metalloproteinase [Ornithorhynchus anatinus]
Length = 616
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 129 YALTGQKWQHKHITYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPY 181
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 182 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 241
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 242 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 282
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 283 DNFK------LPNDDLQGIQKIYGPP 302
>gi|13027802|ref|NP_005932.2| matrix metalloproteinase-16 [Homo sapiens]
gi|109086884|ref|XP_001084206.1| PREDICTED: matrix metalloproteinase-16-like isoform 2 [Macaca
mulatta]
gi|114620829|ref|XP_001136497.1| PREDICTED: matrix metalloproteinase-16 isoform 2 [Pan troglodytes]
gi|3041669|sp|P51512|MMP16_HUMAN RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
Full=MMP-X2; AltName: Full=Membrane-type matrix
metalloproteinase 3; Short=MT-MMP 3; Short=MTMMP3;
AltName: Full=Membrane-type-3 matrix metalloproteinase;
Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
gi|1209008|dbj|BAA12022.1| metalloproteinase [Homo sapiens]
gi|2424979|dbj|BAA22226.1| MT3-MMP [Homo sapiens]
gi|46854871|gb|AAH69500.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
gi|50959771|gb|AAH75004.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
gi|50960189|gb|AAH75005.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
gi|62511905|gb|AAX84515.1| matrix metalloproteinase 16 (membrane-inserted) [Homo sapiens]
gi|119612057|gb|EAW91651.1| matrix metallopeptidase 16 (membrane-inserted), isoform CRA_a [Homo
sapiens]
gi|189067224|dbj|BAG36934.1| unnamed protein product [Homo sapiens]
Length = 607
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|148673639|gb|EDL05586.1| matrix metallopeptidase 16, isoform CRA_b [Mus musculus]
Length = 448
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 153 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPY 205
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 206 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 265
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 266 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 306
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 307 DNFK------LPNDDLQGIQKIYGPP 326
>gi|32766501|gb|AAH54949.1| MGC64247 protein [Xenopus laevis]
Length = 477
Score = 84.4 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 63/195 (32%), Gaps = 48/195 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + YK + + AL WS+V LTF E
Sbjct: 87 VLSGGRWDKTNLTYKIIRFPWQLSKVKV-------RRTIAEALKVWSEVTPLTFTEVHEG 139
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
SDI + + +D + +++FD + W G GT L
Sbjct: 140 RSDIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDEAWTIGNNIGTDLLQ 199
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H S S+MS F +F Y +
Sbjct: 200 VAAHEFGHMLGLQHS-------------------SISKSLMSPF--------YTFRYPLS 232
Query: 183 PMVSDIVAVQKIYGA 197
D +Q +YGA
Sbjct: 233 LSADDKHGIQFLYGA 247
>gi|194037087|ref|XP_001926652.1| PREDICTED: matrix metalloproteinase-16 [Sus scrofa]
Length = 607
Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|148232850|ref|NP_001079811.1| stromelysin-3 precursor [Xenopus laevis]
gi|1705990|sp|Q11005|MMP11_XENLA RecName: Full=Stromelysin-3; Short=ST3; AltName: Full=Matrix
metalloproteinase-11; Short=MMP-11; Flags: Precursor
gi|414918|emb|CAA81616.1| stromelysin-3 [Xenopus laevis]
Length = 477
Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 63/195 (32%), Gaps = 48/195 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+L W + YK + + AL WS+V LTF E
Sbjct: 87 VLSGGRWDKTNLTYKIIRFPWQLSKVKV-------RRTIAEALKVWSEVTPLTFTEVHEG 139
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
SDI + + +D + +++FD + W G GT L
Sbjct: 140 RSDIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDEAWTIGNNIGTDLLQ 199
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H S S+MS F +F Y +
Sbjct: 200 VAAHEFGHMLGLQHS-------------------SISKSLMSPF--------YTFRYPLS 232
Query: 183 PMVSDIVAVQKIYGA 197
D +Q +YGA
Sbjct: 233 LSADDKHGIQFLYGA 247
>gi|5545323|dbj|BAA82538.1| ORF12 [Actinobacillus actinomycetemcomitans]
Length = 1416
Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
F+S YL + D+R +H++ +G KEGRNP F Y+ S+ D+ +A
Sbjct: 612 FNSEYYLNNNQDVREA----NVDPIQHFLDYGWKEGRNPSPKFDLNSYLDSYNDVKSANI 667
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDS--YLYLGSY 492
+ H+ +G +EGR + LYL
Sbjct: 668 NP-------LLHYVKYGKKEGRKIKPVEFGMLYLIKN 697
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+AI+ L ++++ F D + Y + +D+ + +
Sbjct: 576 DAILTGIMQSRGYKLLMKIKKI-FNKTDYDILRKSGLFNSEYYLNNNQDVREA----NVD 630
Query: 382 SMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
++HF ++G EGR+ + FD YL SY+D+++ HY+ +G KEGR
Sbjct: 631 PIQHFLDYGWKEGRNPSPKFDLNSYLDSYNDVKSA----NINPLLHYVKYGKKEGRKIKP 686
Query: 440 F-KALEYIASH 449
+ Y+ +
Sbjct: 687 VEFGMLYLIKN 697
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSY 576
R F + Y+ +++D+ A D HF ++G++EGR S F+ + YL SY
Sbjct: 607 RKSGLFNSEYYLNNNQDVREANVDP-------IQHFLDYGWKEGRNPSPKFDLNSYLDSY 659
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
+D+ + HY+ +G KEGR +
Sbjct: 660 NDVKSA----NINPLLHYVKYGKKEGRKIKP 686
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F + Y+ +++D+ A D HF ++G +EGR + FD YL SY
Sbjct: 607 RKSGLFNSEYYLNNNQDVREANVDP-------IQHFLDYGWKEGRNPSPKFDLNSYLDSY 659
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASH 533
+D+++ HY+ +G KEGR + Y+ +
Sbjct: 660 NDVKSA----NINPLLHYVKYGKKEGRKIKPVEFGMLYLIKN 697
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
F+S YL + D+R +H++ +G KEGRNP F Y+ S+ D+ +A
Sbjct: 612 FNSEYYLNNNQDVREANVD----PIQHFLDYGWKEGRNPSPKFDLNSYLDSYNDVKSANI 667
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI 565
+ H+ +G +EGR I
Sbjct: 668 NP-------LLHYVKYGKKEGRKI 684
>gi|301767356|ref|XP_002919098.1| PREDICTED: matrix metalloproteinase-16-like [Ailuropoda
melanoleuca]
Length = 607
Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|326917841|ref|XP_003205203.1| PREDICTED: matrix metalloproteinase-16-like [Meleagris gallopavo]
Length = 609
Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 64/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 IELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H P + Y+ Y +
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSND-----PTAIMAPFYQ----------YMETDNFR 277
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 278 LPN----------DDLQGIQKIYGPP 293
>gi|149721274|ref|XP_001487888.1| PREDICTED: matrix metallopeptidase 16 (membrane-inserted) [Equus
caballus]
Length = 607
Score = 84.0 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 64/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 HS--------DIKFIS------------SNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
DI I G++ + + +FD + W G
Sbjct: 173 SDLENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|224046469|ref|XP_002199883.1| PREDICTED: matrix metalloproteinase 16 [Taeniopygia guttata]
Length = 609
Score = 84.0 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 IELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|218531909|ref|YP_002422725.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
gi|218524212|gb|ACK84797.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
Length = 1317
Score = 84.0 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 47/139 (33%), Gaps = 21/139 (15%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y SY D+ Q ++HF + G E R+ FDS Y + +
Sbjct: 186 ADLFDESYYLISYPDVAQ----SEMPPLEHFLKHGGPELRNPNAHFDSRWYAETNE---- 237
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
S HYI G EGR+P+ F Y+ +H P+ + H+
Sbjct: 238 AACSGYAIPLEHYIERGTLEGRDPNPNFDTAFYVDNH----------PEARKAPLRHYLT 287
Query: 473 FGCEEGRFVTFDSYLYLGS 491
G + YL S
Sbjct: 288 VGQHAATKPAPNFDAYLPS 306
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 24/144 (16%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL SY D+ H++ HG E RNP+A F + Y ++E + +A
Sbjct: 189 FDESYYLISYPDVAQ----SEMPPLEHFLKHGGPELRNPNAHFDSRWYAETNEAACSGYA 244
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+H+ G EGR + F+ Y+ ++ + A +HY+T G
Sbjct: 245 IP-------LEHYIERGTLEGRDPNPNFDTAFYVDNHPEARK-------APLRHYLTVGQ 290
Query: 600 KEGRALGISGMQFKSVMNLSEKSR 623
A F + + + +
Sbjct: 291 H---AATKPAPNFDAYLPSGKTAP 311
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 47/139 (33%), Gaps = 24/139 (17%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D F Y+ S+ D+ + +HF G E R FDS Y +
Sbjct: 187 DLFDESYYLISYPDVAQSEMPP-------LEHFLKHGGPELRNPNAHFDSRWYAETN--- 236
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
S HYI G EGR+P+ F Y+ +H P+ +A H+
Sbjct: 237 -EAACSGYAIPLEHYIERGTLEGRDPNPNFDTAFYVDNH----------PEARKAPLRHY 285
Query: 555 SNFGYEEGRSITFNPDLYL 573
G N D YL
Sbjct: 286 LTVGQHAATKPAPNFDAYL 304
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 16/101 (15%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D F Y+ S+ D+ + +HF G E R+ F+ Y +
Sbjct: 187 DLFDESYYLISYPDVAQSEMPP-------LEHFLKHGGPELRNPNAHFDSRWYAETN--- 236
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
S + +HYI G EGR F + +
Sbjct: 237 -EAACSGYAIPLEHYIERGTLEGRD---PNPNFDTAFYVDN 273
>gi|260820674|ref|XP_002605659.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
gi|229290994|gb|EEN61669.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
Length = 606
Score = 84.0 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 49/198 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-S 74
+ L YW + Y+ T + + + R A WS V LTF E
Sbjct: 118 YALVGYYWQKKNLTYRIVRTTPQLSPYVV-------HDAIRRAFNVWSDVTPLTFTEMFH 170
Query: 75 IHSDIK------FISSNNGYVCTPRY-------DSRYFMEINFDKADVWRYGIGKGTILS 121
+DI F N + R + +FD+ + W +G L
Sbjct: 171 GEADIMIDFLWGFHGDGNPFDGPGNTLAHAFFPGPRRGGDTHFDEEEKWTM-TKEGANLF 229
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GHALGL H +N ++M F +
Sbjct: 230 QVATHEFGHALGLGHSSEHN-------------------TIMGPF--------YRYRDPL 262
Query: 182 TPMVSDIVAVQKIYGAPK 199
DI +Q++YGAP+
Sbjct: 263 QLTEDDIRGIQQLYGAPE 280
>gi|332238258|ref|XP_003268322.1| PREDICTED: matrix metalloproteinase-16 [Nomascus leucogenys]
Length = 607
Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|73999559|ref|XP_544165.2| PREDICTED: similar to matrix metalloproteinase 16 isoform 1 [Canis
familiaris]
Length = 595
Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 108 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 160
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 161 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 220
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 221 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 261
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 262 DNFK------LPNDDLQGIQKIYGPP 281
>gi|166363088|ref|YP_001655361.1| putative calcium binding hemolysin protein [Microcystis aeruginosa
NIES-843]
gi|166085461|dbj|BAG00169.1| putative calcium binding hemolysin protein [Microcystis aeruginosa
NIES-843]
Length = 836
Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 52/306 (16%), Positives = 95/306 (31%), Gaps = 45/306 (14%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D + N+ T D+ Y + N + + +G ++
Sbjct: 164 ADFTGTNGNDNITGTSGDDNIYGLGGNDTLSGLAGNDRLEGGSGNNTL------------ 211
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
Y G N + M D + ++ +SD +Q +
Sbjct: 212 ---YGGTGNDVFNFAYPLNTNTSDVAM------DFVQGQDKIDVSSLNLSDWATLQLL-- 260
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDS-------GGDDLLDLTLIGGVKNYIDLNTES 249
I K++ I T +D G + L + N I+LN
Sbjct: 261 ------------ISNDGKNNALITTFFDGVQSQLKLNGINPTLLQASDFIFNTINLNQSI 308
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
Y N + +++ G GND + G ++ SG+D G G DT Y
Sbjct: 309 DGDDF-YTYNDQLFGGLGNDTLRGFKGNDTLFGEQGDDRLDGGSGSDTLYGGLGDDTAVY 367
Query: 310 YAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + + D AN D L +++L+F+DQ + + + S
Sbjct: 368 TGNRSQYSWTSNQGVFTITDSVANRDGIDTLYGIQKLQFSDQIVTIAPEEDFPSITLAVS 427
Query: 368 YEDLIQ 373
+ +
Sbjct: 428 PSSVTE 433
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++GN+ + GNS N +G D G G DTF + + I +
Sbjct: 667 NGTGNAGNNKITGNSGINQINGRAGIDTLTGGLGADTFIFQFGQ---STISTRDRITDFA 723
Query: 330 ANEHKQDFLS 339
N K D L+
Sbjct: 724 INSDKIDLLT 733
>gi|170752013|ref|YP_001758273.1| hypothetical protein Mrad2831_5645 [Methylobacterium radiotolerans
JCM 2831]
gi|170658535|gb|ACB27590.1| hypothetical protein Mrad2831_5645 [Methylobacterium radiotolerans
JCM 2831]
Length = 227
Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD YL D+R G D +H++ HG EGR+P A F Y+A++ D+ A
Sbjct: 21 PGFDPAYYLDRNPDVRRA-GLD---PLQHFLNHGWTEGRDPSAGFSTAGYLAANPDVAAA 76
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRF 480
+ HF G EGR
Sbjct: 77 GQNP-------LIHFLQNGLAEGRS 94
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD YL D+R G D +H++ HG EGR+P A F Y+A++ D+ A
Sbjct: 21 PGFDPAYYLDRNPDVRRA-GLD---PLQHFLNHGWTEGRDPSAGFSTAGYLAANPDVAAA 76
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRS 564
+ HF G EGRS
Sbjct: 77 GQNP-------LIHFLQNGLAEGRS 94
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
+ Y D+ + + ++HF G +EGRD + F + YL + D+
Sbjct: 19 PLPGFDPAYYLDRNPDVRRA----GLDPLQHFLNHGWTEGRDPSAGFSTAGYLAANPDVA 74
Query: 413 NVFGSDRGAAARHYITHGVKEGRN 436
H++ +G+ EGR+
Sbjct: 75 AA----GQNPLIHFLQNGLAEGRS 94
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 14/122 (11%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+ + D+ A D HF N G+ EGR + F+ YL + D+
Sbjct: 22 GFDPAYYLDRNPDVRRAGLDP-------LQHFLNHGWTEGRDPSAGFSTAGYLAANPDVA 74
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLY 640
+ H++ +G+ EGR+ G V S+ + H V L
Sbjct: 75 AAGQN----PLIHFLQNGLAEGRSGYTPGAPPTQVGQKG-TSQAQGAPGSPESHDHVPLQ 129
Query: 641 TD 642
Sbjct: 130 GF 131
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 13/83 (15%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRN 497
F Y+ + D+ A D HF N G EGR F + YL + D+
Sbjct: 23 FDPAYYLDRNPDVRRAGLDP-------LQHFLNHGWTEGRDPSAGFSTAGYLAANPDVAA 75
Query: 498 VFGSDRGAAARHYITHGVKEGRN 520
+ H++ +G+ EGR+
Sbjct: 76 AGQN----PLIHFLQNGLAEGRS 94
Score = 45.5 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
F+P YL D+ QH++ HG EGR F + L+
Sbjct: 21 PGFDPAYYLDRNPDVRRA----GLDPLQHFLNHGWTEGRD---PSAGFSTAGYLAAN 70
>gi|159027694|emb|CAO89559.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1463
Score = 83.6 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 71/195 (36%), Gaps = 7/195 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+IY +GG D LD T ++L + + +T
Sbjct: 1236 GNDIYCFNASTPLGSDTIQETTTGGIDTLDFTGTN-TAVRVNLGITTNQTAVTNNLRLTF 1294
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + IE+++G SGND + GNS NN GND G G D+ + L
Sbjct: 1295 SANNTIENIIGDSGNDRLTGNSLNNTLTGGGGNDQLTGQDGNDSLIGGSGDDLLTGGNGS 1354
Query: 323 NAIIVYDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ I +N + DF +++ + ++ Q I + + V D+
Sbjct: 1355 DNFIFNSSNLGIDAISDFTPGSDKIVLSKAIFTAL---QSIIGNGFSQAAEFASVDDDDL 1411
Query: 380 FESMKHFYEFGLSEG 394
+ F + S G
Sbjct: 1412 VATSSAFIVYSNSSG 1426
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 4/135 (2%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G + Y+ + S T + G + + I E+++ G E
Sbjct: 365 NGGSGIDRYEADYSYASSGLTMTYNTATGSGTITVGTETDTFTSI----ENFNGFKGTEY 420
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I T +E + G GND + GN+ ++ + GNDV +G G D + + L
Sbjct: 421 NDVIFGGTAVEELKGGGGNDTISGNAGDDYIYGEDGNDVLNGGVGNDNIYGGNGNDLLNG 480
Query: 319 YRFENAIIVYDANEH 333
++ + N
Sbjct: 481 DSGDDNFTGDEGNND 495
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 12/189 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G++ Y + S T YD+ G + + I ES++ G +
Sbjct: 498 NGGAGSDNYAADYSYGSSGLTMT-YDTAGSGTITVGTETDTFTSI----ESFNGFKGTDY 552
Query: 259 NMTIAQHTVIESVVGSS-----GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N I T + GND + GN+ ++ + +GNDV +G + D + +
Sbjct: 553 NDVIFGGTAVGYGYYEYLYGREGNDTISGNAGGDIIYGENGNDVLNGGADNDQLYGGNGN 612
Query: 314 YLYKIYRFENAIIVYDANEHKQD--FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ Y D L+D + + D + + + ++ +D
Sbjct: 613 DTLQGTNSGTGESDYLVGGSGSDRFILADTTKTFYDDGLTATEGTSDYAEIADFSTIDDT 672
Query: 372 IQVIGQDVF 380
IQ+ G
Sbjct: 673 IQLRGASSD 681
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N I + +++ G GND + G N+ + +GND +G G D F A
Sbjct: 165 DFTGTNGNDNITGTSGDDNISGLDGNDTLSGLGGNDSIYGGNGNDSLNGGDGNDYFTNDA 224
Query: 312 PSYLYKIYRFENAIIV 327
+ ++ V
Sbjct: 225 GNDTINGGSGDDRYQV 240
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 53/367 (14%), Positives = 102/367 (27%), Gaps = 58/367 (15%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F T+ + +I S ++ D+ + N G + ++
Sbjct: 165 DFTGTNGNDNITGTSGDDNISGLDGNDTLSGLGGNDSIYGGNGNDSLNGGDGNDYFTNDA 224
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--- 185
G+ + NGG DY + S + M+Y S T
Sbjct: 225 GN-------DTINGGSGDDRYQVDYSSASSGLT-MTYNTTTGSGTITVGTETDTFTSIES 276
Query: 186 ---------SDIV---AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD- 232
+D++ + +GA G GN+ IY G+D+L+
Sbjct: 277 FEGFKGTEYNDVIFGGTASEYWGALSGGSGNDTISGNAGNDR------IYGEDGNDVLNG 330
Query: 233 ----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE-----------------SV 271
L GG N + + N TI + I+ +
Sbjct: 331 GADTDALYGGSGNDLLNGDAGDDYFTNEDGNDTINGGSGIDRYEADYSYASSGLTMTYNT 390
Query: 272 VGSSGN-------DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
SG D N F + NDV G + ++ + ++
Sbjct: 391 ATGSGTITVGTETDTFTSIENFNGFKGTEYNDVIFGGTAVEELKGGGGNDTISGNAGDDY 450
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
I D N+ + + + + + + + + + G D + +
Sbjct: 451 IYGEDGNDVLNGGVGNDNIYGGNGNDLLNGDSGDDNFTGDEGNNDTINGGAGSDNYAADY 510
Query: 385 HFYEFGL 391
+ GL
Sbjct: 511 SYGSSGL 517
>gi|157278088|ref|NP_001098144.1| stromelysin-3 [Oryzias latipes]
gi|19071862|dbj|BAB85675.1| stromelysin-3 [Oryzias latipes]
Length = 492
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 69/222 (31%), Gaps = 48/222 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + YK + +++ R A G WS+V L F E +
Sbjct: 118 LFGGRWEKTDLSYKIMRFPWQMREEKV-------RDIFREAFGVWSEVTPLRFREVTDGK 170
Query: 77 SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHN 123
+DI + + +D + E++FD + W G GT L
Sbjct: 171 ADITIDFNRYWHGDNLPFDGPGGILAHAFFPRTHREGEVHFDFDEHWTVGNSVGTDLLQV 230
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE GH LGL H + VM F S Y
Sbjct: 231 AAHEFGHVLGLQHSQDPDA-------------------VMCPF--------YSDSYPLQL 263
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
D +Q +YG P ++ + +T +D+
Sbjct: 264 SDDDKRGIQHLYGPPVHRPPEVTETNDISSELPDACRTNFDA 305
>gi|281352125|gb|EFB27709.1| hypothetical protein PANDA_007683 [Ailuropoda melanoleuca]
Length = 565
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 78 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 130
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 131 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 190
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 191 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 231
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 232 DNFK------LPNDDLQGIQKIYGPP 251
>gi|291388244|ref|XP_002710723.1| PREDICTED: matrix metalloproteinase 16 [Oryctolagus cuniculus]
Length = 607
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|1209010|dbj|BAA12023.1| metalloproteinase [Homo sapiens]
gi|119612058|gb|EAW91652.1| matrix metallopeptidase 16 (membrane-inserted), isoform CRA_b [Homo
sapiens]
Length = 457
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|222148481|ref|YP_002549438.1| hypothetical protein Avi_2010 [Agrobacterium vitis S4]
gi|221735469|gb|ACM36432.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 678
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 14/132 (10%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
+ Y + ++ + ++ HF + G S+G FD++ YL YDD
Sbjct: 555 LLASDLFDFDFYCSQLKNALITPPSAPIDAALHFVKAGFSQGLWPNAFFDTHWYLSQYDD 614
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDH 469
+RN HY +G KE R+P F Y+A++ D+ A + H
Sbjct: 615 IRN----SGINPLWHYHINGWKERRDPSRKFSTAFYLAAYPDIQVANINP-------LQH 663
Query: 470 FSNFGCEEGRFV 481
F G EGR +
Sbjct: 664 FLRHGQHEGRSI 675
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
D F Y + L NA P HF G +G + FD++ YL YDD
Sbjct: 558 SDLFDFDFYCSQ---LKNALITPPSAPIDAALHFVKAGFSQGLWPNAFFDTHWYLSQYDD 614
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
+RN HY +G KE R+P F Y+A++ D+ A + H
Sbjct: 615 IRNSG----INPLWHYHINGWKERRDPSRKFSTAFYLAAYPDIQVANINP-------LQH 663
Query: 554 FSNFGYEEGRSI 565
F G EGRSI
Sbjct: 664 FLRHGQHEGRSI 675
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
AA H++ G +G P+AF + S D I P H+ G++E R
Sbjct: 584 AALHFVKAGFSQGLWPNAFFDTHWYLSQYDDIRNSGINP------LWHYHINGWKERRDP 637
Query: 566 T--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
+ F+ YL +Y D+ QH++ HG EGR++
Sbjct: 638 SRKFSTAFYLAAYPDIQVA----NINPLQHFLRHGQHEGRSI 675
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 12/101 (11%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDD 578
D F Y + L NA P HF G+ +G F+ YL+ YDD
Sbjct: 558 SDLFDFDFYCSQ---LKNALITPPSAPIDAALHFVKAGFSQGLWPNAFFDTHWYLSQYDD 614
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLS 619
+ + HY +G KE R +F + L+
Sbjct: 615 IR----NSGINPLWHYHINGWKERRD---PSRKFSTAFYLA 648
>gi|182676844|ref|YP_001830991.1| proprotein convertase P [Beijerinckia indica subsp. indica ATCC 9039]
gi|182636474|gb|ACB97247.1| Proprotein convertase P [Beijerinckia indica subsp. indica ATCC 9039]
Length = 2911
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 63/194 (32%), Gaps = 13/194 (6%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y + GDD LD +Y S+ T
Sbjct: 2623 DTLYGGAGNDTLIGGAGNDKLQGGAGDDTLDGGAGTDAASYTQALAGVTVSLAVSGPQNT 2682
Query: 262 IAQHTV----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
I T IE++ GS +DV+ G++ NNV ++GND+ DG G DT
Sbjct: 2683 IGAGTDTLLNIENLTGSIYDDVLTGDAGNNVIDGNAGNDLIDGGLGNDTLIGGTGIDTVT 2742
Query: 318 IYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + V + D LS E L + +++ A +
Sbjct: 2743 YTSATSGVTVSLALTTAQNTGGAGTDTLSGFENLTGSAYNDVLTGDAGNNVINGGAGNDI 2802
Query: 371 LIQVIGQDVFESMK 384
L+ G D +
Sbjct: 2803 LVGSAGSDTLDGGA 2816
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 65/191 (34%), Gaps = 17/191 (8%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIG 254
G G+N+ T+ G D L + GV + L T +
Sbjct: 2199 TGDSGDNVIDGGAGNDLIDGGLGNDTLIGGAGIDTLTYASATSGVTVSLALTTAQATGGA 2258
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + E++ GS+ NDV+ G+ +NV +GND+ DG G DT A
Sbjct: 2259 GTDTL------SGFENLTGSAYNDVLTGSGGDNVIDGGAGNDLIDGGLGNDTLIGGAGVD 2312
Query: 315 LYKIYRFENAIIVYDA-------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + V A D LS E L + ++++ A
Sbjct: 2313 TVTYVSATSGVTVSLALTTAQATGGAGTDTLSGFENLTGSAYSDVLTGDGGDNVIDGGAG 2372
Query: 368 YEDLIQVIGQD 378
+ L G D
Sbjct: 2373 NDTLYGGAGND 2383
Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 69/191 (36%), Gaps = 17/191 (8%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIG 254
G+ GNN+ P T+ G D + + GV + L T +
Sbjct: 2119 TGNGGNNVIDGGAGNDTIDGGPGNDTLIGGAGIDTVSYASATSGVTVSLALTTAQATGGA 2178
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + E++ GS+ NDV+ G+S +NV +GND+ DG G DT A
Sbjct: 2179 GTDTL------SGFENLTGSAYNDVLTGDSGDNVIDGGAGNDLIDGGLGNDTLIGGAGID 2232
Query: 315 LYKIYRFENAIIVYDA-------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + V A D LS E L + ++++ A
Sbjct: 2233 TLTYASATSGVTVSLALTTAQATGGAGTDTLSGFENLTGSAYNDVLTGSGGDNVIDGGAG 2292
Query: 368 YEDLIQVIGQD 378
+ + +G D
Sbjct: 2293 NDLIDGGLGND 2303
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 61/190 (32%), Gaps = 17/190 (8%)
Query: 201 SLGNNI-YKIEVQQ----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GN Y D + G D + + ++L + +
Sbjct: 2039 PAGNTTIYGGSGGSAVYIGDEAGSNILVGGAGVDTVSYSSAS-AGVTVNLGVTTAQATRS 2097
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + E++ GS+ NDV+ GN NNV +GND DG G DT A
Sbjct: 2098 TGTDTLLGF----ENLTGSAYNDVLTGNGGNNVIDGGAGNDTIDGGPGNDTLIGGAGIDT 2153
Query: 316 YKIYRFENAIIVYDA-------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + V A D LS E L + ++++ A
Sbjct: 2154 VSYASATSGVTVSLALTTAQATGGAGTDTLSGFENLTGSAYNDVLTGDSGDNVIDGGAGN 2213
Query: 369 EDLIQVIGQD 378
+ + +G D
Sbjct: 2214 DLIDGGLGND 2223
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 63/191 (32%), Gaps = 13/191 (6%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y + GDD LD +Y S+ T
Sbjct: 2374 DTLYGGAGNDTLIGGAGNDKLQGGAGDDTLDGGAGTDAASYTQALAGVTVSLAVSGPQNT 2433
Query: 262 IAQHTV----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
I T IE++ GS +DV+ G++ NNV ++GND+ DG G DT + +
Sbjct: 2434 IGAGTDTLLNIENLTGSIYDDVLTGDAGNNVIDGNAGNDLIDGGLGNDTLIGGSGTDTVS 2493
Query: 318 IYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + V + D LS E L + ++++ +
Sbjct: 2494 YASATSGVTVSLALTTAQNTGGAGTDTLSGFENLTGSAYNDVLTGDSGNNVIDGGLGNDT 2553
Query: 371 LIQVIGQDVFE 381
L G D
Sbjct: 2554 LDGGAGVDTVT 2564
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 63/183 (34%), Gaps = 10/183 (5%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GNN+ T+ G D + + L + + GG
Sbjct: 2457 TGDAGNNVIDGNAGNDLIDGGLGNDTLIGGSGTDTVSYASAT-SGVTVSLALTTAQNTGG 2515
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + E++ GS+ NDV+ G+S NNV GND DG +G+DT Y + +
Sbjct: 2516 AGTDTL----SGFENLTGSAYNDVLTGDSGNNVIDGGLGNDTLDGGAGVDTVTYVSATSG 2571
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ D LS E L + ++++ A + L
Sbjct: 2572 VTVSLA--LTTAQATGGAGTDTLSGFENLTGSAYSDVLTGDGGDNVIDGGAGNDTLYGGA 2629
Query: 376 GQD 378
G D
Sbjct: 2630 GND 2632
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GNN+ T+ G D + T + L + + GG
Sbjct: 2706 TGDAGNNVIDGNAGNDLIDGGLGNDTLIGGTGIDTVTYTSAT-SGVTVSLALTTAQNTGG 2764
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + E++ GS+ NDV+ G++ NNV +GND+ GS+G DT A + +
Sbjct: 2765 AGTDTL----SGFENLTGSAYNDVLTGDAGNNVINGGAGNDILVGSAGSDTLDGGAGNDV 2820
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y ++ + ++++DA + L FAD + ++ Q
Sbjct: 2821 YIYHQADGNMLIHDAGDSSGPT--PFNTLSFADLTLSNLLFSQSG 2863
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 71/203 (34%), Gaps = 23/203 (11%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSS-- 252
GS G+N+ T+ G D + + GV + L T +
Sbjct: 2279 TGSGGDNVIDGGAGNDLIDGGLGNDTLIGGAGVDTVTYVSATSGVTVSLALTTAQATGGA 2338
Query: 253 ----IGGYEKNMTIAQHTVI-----ESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ G+E A V+ ++V+ G +GND + G + N+ +GND G +
Sbjct: 2339 GTDTLSGFENLTGSAYSDVLTGDGGDNVIDGGAGNDTLYGGAGNDTLIGGAGNDKLQGGA 2398
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEH-------KQDFLSDVERLRFADQCIDSVN 355
G DT A + + + V A D L ++E L +
Sbjct: 2399 GDDTLDGGAGTDAASYTQALAGVTVSLAVSGPQNTIGAGTDTLLNIENLTGSIYDDVLTG 2458
Query: 356 VKQRSILEYTASYEDLIQVIGQD 378
++++ A + + +G D
Sbjct: 2459 DAGNNVIDGNAGNDLIDGGLGND 2481
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 15/142 (10%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L ++S + + VI+ G +GND + G + N+ +GND G +G
Sbjct: 2597 NLTGSAYSDVLTGDGG-----DNVID---GGAGNDTLYGGAGNDTLIGGAGNDKLQGGAG 2648
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEH-------KQDFLSDVERLRFADQCIDSVNV 356
DT A + + + V A D L ++E L +
Sbjct: 2649 DDTLDGGAGTDAASYTQALAGVTVSLAVSGPQNTIGAGTDTLLNIENLTGSIYDDVLTGD 2708
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
++++ A + + +G D
Sbjct: 2709 AGNNVIDGNAGNDLIDGGLGND 2730
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 19/175 (10%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
+ + G T + +D A + GN +Y ++ T+ SG D L
Sbjct: 1906 QGNYTAGKPQTFIYTDEFATL------SSTPGNALYD-----PNNAARFTLTGSGYQDTL 1954
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+++ G N + + S+I G + IA + I V G V N+ N++
Sbjct: 1955 NVSATTGAVNLDLVTGSTDSTIDGRY--LAIAPGSKINKVYLGDGVSTVHLNADNDIINT 2012
Query: 292 SSGNDVFDGSSGLDTFFYYA------PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+GN + G +G D + P+ IY VY +E + L
Sbjct: 2013 GAGNAILYGGAGFDIYNIGKWLQRSIPAGNTTIYGGSGGSAVYIGDEAGSNILVG 2067
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 32/80 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N+ I + ++G + ND + G + +++ +G V +G D + +
Sbjct: 1004 NASGTNWNVFIQGGSGNNIIIGGTANDALAGGTGDDLIEAGTGGSVIHAGAGNDVIYGGS 1063
Query: 312 PSYLYKIYRFENAIIVYDAN 331
S + NA D +
Sbjct: 1064 GSTSTAQPAYVNAGNTADIS 1083
>gi|88800552|ref|ZP_01116114.1| Glycosyl transferase, family 2 [Reinekea sp. MED297]
gi|88776697|gb|EAR07910.1| Glycosyl transferase, family 2 [Reinekea sp. MED297]
Length = 493
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL +Y D++ G D AA HY+ HG KEGRNP F Y+ + D+ +
Sbjct: 412 FDETWYLKTYPDVQKA-GLD---AAIHYLRHGAKEGRNPGPNFDTQWYLQQYPDVQKSKL 467
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ H+ +G +E R V+
Sbjct: 468 N-------ALVHYILYGIDENRKVSP 486
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDD 578
D F Y+ ++ D+ A D H+ G +EGR+ F+ YL Y D
Sbjct: 409 SDLFDETWYLKTYPDVQKAGLD-------AAIHYLRHGAKEGRNPGPNFDTQWYLQQYPD 461
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
+ + A HYI +G+ E R + + ++
Sbjct: 462 VQK----SKLNALVHYILYGIDENRKVSPRLLTHRA 493
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFD 400
R+R ++Q Y +Y D+ + ++ H+ G EGR+ FD
Sbjct: 396 RVRLSEQVELLKASDLFDETWYLKTYPDVQKA----GLDAAIHYLRHGAKEGRNPGPNFD 451
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ YL Y D++ + A HYI +G+ E R
Sbjct: 452 TQWYLQQYPDVQK----SKLNALVHYILYGIDENRKVSP 486
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL +Y D++ G D AA HY+ HG KEGRNP F Y+ + D+ +
Sbjct: 412 FDETWYLKTYPDVQKA-GLD---AAIHYLRHGAKEGRNPGPNFDTQWYLQQYPDVQKSKL 467
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
+ H+ +G +E R ++
Sbjct: 468 N-------ALVHYILYGIDENRKVS 485
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
D F Y+ ++ D+ A DA H+ G +EGR FD+ YL Y D
Sbjct: 409 SDLFDETWYLKTYPDVQKAGLDAA-------IHYLRHGAKEGRNPGPNFDTQWYLQQYPD 461
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA 523
++ + A HYI +G+ E R
Sbjct: 462 VQK----SKLNALVHYILYGIDENRKVSP 486
>gi|288942625|ref|YP_003444865.1| Hemolysin-type calcium-binding region [Allochromatium vinosum DSM
180]
gi|288897997|gb|ADC63833.1| Hemolysin-type calcium-binding region [Allochromatium vinosum DSM
180]
Length = 1227
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ VI++ +SGND + + ++ GND G SG DT + A Y+I E
Sbjct: 421 GNDVIKNTHANSGNDEIDTGAGDDTIEAGGGNDRIKGGSGTDTAVFSANFADYRIDTIEG 480
Query: 324 AIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ V D N D L DVERL+F DQ I+ +N + ++ ED+ +V+ F
Sbjct: 481 GVSVSDLSGNGDGVDELYDVERLQFLDQTINLINHAPTASNRTISTKEDVARVLAVANF 539
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 2/107 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTE--SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G D L Y D T +++ G N + + + G +GND + G
Sbjct: 1032 GSGTDTLVGIENLIGSAYADKLTGNSGRNNLSGGVGNDILNGGAGNDILNGDTGNDTLNG 1091
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ N+ +G D+ +G +G D +++ NA D
Sbjct: 1092 GAGNDTLSGGAGKDILNGGAGNDILNGGTGIDIFRFDTALNAASNLD 1138
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 3/122 (2%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + D + I DL + S +M I + + +
Sbjct: 826 SGYASIGFKVSDGKATSTATYSITIDVTLVRDDLILKGTSGNDTLTGDM-IDLGSY-DRL 883
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G +GND + G + N+ +GND+ +G G D S +Y + + + +AN
Sbjct: 884 IGLAGNDSLFGLAGNDTLEGGAGNDILNGGKGSDRMIGGDGSDIYYVDNTGDVVSETNAN 943
Query: 332 EH 333
Sbjct: 944 AS 945
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 17/133 (12%)
Query: 227 GDDLLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G D + ++L + GG + + IE+++GS+ D + GN
Sbjct: 1001 GTDTVSYVVGATTEKTGVTLNLALTTAQETGGSGTDTLVG----IENLIGSAYADKLTGN 1056
Query: 284 SA---------NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
S N++ +GND+ +G +G DT A + I+ A
Sbjct: 1057 SGRNNLSGGVGNDILNGGAGNDILNGDTGNDTLNGGAGNDTLS-GGAGKDILNGGAGNDI 1115
Query: 335 QDFLSDVERLRFA 347
+ + ++ RF
Sbjct: 1116 LNGGTGIDIFRFD 1128
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 14/142 (9%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------APSYLY 316
+ VI++ +SGND + + ++ GND D +G DT A
Sbjct: 197 GNDVIKNTHANSGNDEIDTGAGDDTIEAGGGNDEIDTGAGDDTIDAGNDGGNIEAGDGND 256
Query: 317 KIYRFENAIIVYDANEHKQDFL-------SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ N V D + +D E D+ ++ YT
Sbjct: 257 QVTVGRNGGTVADGGSGTDRLILDWSAARADGEYTWLGFSTYDTETATWQTFDYYTVHLS 316
Query: 370 DLIQVIGQDVFESMKHFYEFGL 391
DL V+ + Y +G
Sbjct: 317 DLKAVLASADTLRLDLSYRYGY 338
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 7/163 (4%)
Query: 225 SGGDD--LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV-VGSSGNDVVI 281
G D +D T + + +T S+ + T+ + E+ + S+G +
Sbjct: 922 GDGSDIYYVDNTGDVVSETNANASTGGIDSVYSSLTDYTLDPNV--ENGRILSTGTANLT 979
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFY--YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
GN NN+ GN++ G +G DT Y A + + + D L
Sbjct: 980 GNQLNNLLKAGIGNNILTGGTGTDTVSYVVGATTEKTGVTLNLALTTAQETGGSGTDTLV 1039
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+E L + R+ L + L G D+
Sbjct: 1040 GIENLIGSAYADKLTGNSGRNNLSGGVGNDILNGGAGNDILNG 1082
>gi|172356113|ref|NP_001116499.1| matrix metalloproteinase 1 isoform 1 [Bombyx mori]
gi|169730452|gb|ACA64804.1| matrix metalloproteinase variant 1 [Bombyx mori]
Length = 561
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 91/270 (33%), Gaps = 37/270 (13%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+ R + L+ W + YK + + E++ E+A+ A WS D
Sbjct: 120 FGESRAKRYALQGSRWRVKNLTYKISKYPSR---LNRAEVDA---ELAK-AFSVWSDYTD 172
Query: 68 LTFEET---SIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIG 115
LTF + +H +I+F +G Y Y + +FD A++W
Sbjct: 173 LTFTQKRSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEMWSINSR 232
Query: 116 KGTILSHNALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+GT L A HE GH+LGL H Y G P + +D D + S +
Sbjct: 233 RGTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYDPAFQLDQDDVQG-----IQSLYG 287
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ G P V Q P + I S F+ G
Sbjct: 288 HKTQTDIGGGGGGLIPSVPRATTQQPSAEDPALCADPRVDTIFNSADGSTFVF-----KG 342
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
D LT G Y L + +W + G
Sbjct: 343 DHYWRLTEDGVAAGYPRLISRAWPGLPGNI 372
>gi|307592277|ref|YP_003899868.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985922|gb|ADN17802.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 301
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 18/175 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--------G 254
GN+IY +GG D LD T G N I+L S ++
Sbjct: 57 GNDIYFFNASSSLGSDTIIETTTGGIDTLDFTGTTGNVN-INLGISSTQTVVSSAELVPH 115
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ +T++ V+E+++G S D +IGNS NN +GND G G D+ A +
Sbjct: 116 PNQLQLTLSAGNVLENLLGGSSEDCLIGNSLNNTITGGAGNDTLLGGGGNDSLIEGAGND 175
Query: 315 LYKIYRFENAIIVYDANEHKQ---------DFLSDVERLRFADQCIDSVNVKQRS 360
+ + I + DF S +++ + +++ +
Sbjct: 176 ILTGGTGNDKFIYQTRRAFETGDVGIDVVSDFTSGSDKIVLSKATFTALSSIVGN 230
>gi|158286645|ref|XP_001688107.1| AGAP006904-PA [Anopheles gambiae str. PEST]
gi|158286647|ref|XP_001688108.1| AGAP006904-PB [Anopheles gambiae str. PEST]
gi|158286649|ref|XP_308849.3| AGAP006904-PC [Anopheles gambiae str. PEST]
gi|157020567|gb|EDO64756.1| AGAP006904-PA [Anopheles gambiae str. PEST]
gi|157020568|gb|EDO64757.1| AGAP006904-PB [Anopheles gambiae str. PEST]
gi|157020569|gb|EAA04040.3| AGAP006904-PC [Anopheles gambiae str. PEST]
Length = 570
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 89/281 (31%), Gaps = 67/281 (23%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---E 72
+ L+ W + Y+ E +E+A+ A G WS+ DL F
Sbjct: 111 YALQGSRWKVKDLTYRISKYPRRL------ERTAVDKEIAK-AFGVWSEYTDLRFTPKKT 163
Query: 73 TSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++H DI+F + +G Y Y + +FD A+ W +GT L
Sbjct: 164 GAVHIDIRFEENEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQV 223
Query: 124 ALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + + G D + DS
Sbjct: 224 AAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFRLDS------------------------ 259
Query: 182 TPMVSDIVAVQKIYGAPKGSLGN-------------NIYKIEVQQKDSPFIQTIYDSGGD 228
DI +Q +YG + G +++ + SP I I+++
Sbjct: 260 ----DDIQGIQTLYGTKTRNPGGGAGATPTRTPRPKTPTEMDSELCTSPKIDAIFNTADG 315
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-----SIGGYEKNMTIAQ 264
K + E + G N+ A
Sbjct: 316 STYAFKGDKYYKLTENAVAEGYPKKISDGWPGLPGNIDAAF 356
>gi|126322083|ref|XP_001368525.1| PREDICTED: similar to metalloproteinase [Monodelphis domestica]
Length = 607
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|260818326|ref|XP_002604334.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
gi|229289660|gb|EEN60345.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
Length = 423
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/215 (22%), Positives = 75/215 (34%), Gaps = 60/215 (27%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+ +A + L W+ + Y+ + LT+H A+E R A WS LTF
Sbjct: 38 DVLARYALSGTKWAKNDLTYRLESLTSHLTE-------TEAREAIRDAFRVWSDYTPLTF 90
Query: 71 EETSIH-SDIKFISSNNG-----------------------YVCTPRYDSRYFME--INF 104
+DI S PR + Y+++ +F
Sbjct: 91 TAVPSGRADIIIKFSTGDHQDGSPFDGRFDFHTGRGLRLAHAFQPPRDSNTYYIDGDTHF 150
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
D ++W +GT L A+HE GHALGL H PV G ++M
Sbjct: 151 DADELWTLNSPEGTNLFQVAVHEFGHALGLSH-------TPVPG------------TIM- 190
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
P D + D +A+Q +YG +
Sbjct: 191 --FPAYIYKDNPCMHP-----DDKMAIQSLYGKDE 218
>gi|254560485|ref|YP_003067580.1| glycosyl transferase [Methylobacterium extorquens DM4]
gi|254267763|emb|CAX23610.1| putative glycosyl transferase [Methylobacterium extorquens DM4]
Length = 1296
Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 83/232 (35%), Gaps = 31/232 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------------- 439
GR FD Y Y DL + G + RHY+ HG EGR P+A
Sbjct: 23 GRGGGFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVAALEAEGGAL 81
Query: 440 ---FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F Y A ++DL +H+ FG EGR D + Y+ +
Sbjct: 82 PSDFIPEHYRALYDDLAGLTEPW-----QLSEHYLRFGRFEGRAHGADLSAFEQEYERML 136
Query: 497 NVFGS-DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN-AFADAPDLVQAGKDHF 554
+ + A ++ V P A+ L + L A P G F
Sbjct: 137 ASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLAHPPASRMEGLVAF 196
Query: 555 SNFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G E I+ F+P Y ++ D + G+ + +H++ G+++G
Sbjct: 197 LTEGVERLAPISLRLRFDPHFYRSNNPD--SSAGASDADLYRHWLGKGIQKG 246
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 48/297 (16%), Positives = 82/297 (27%), Gaps = 90/297 (30%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------ 398
+F + ++ Y Y DL ++G + +H+ + G +EGR
Sbjct: 14 QFGRRISEAGRGGGFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVA 72
Query: 399 ------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
F Y YDDL + ++ + HY+ G EGR A +
Sbjct: 73 ALEAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGA-DLSAFE 129
Query: 447 ASHEDLINAFAD-APDLVQVGKDHFSNFGC------------------EEG--------- 478
+E ++ + A H EG
Sbjct: 130 QEYERMLASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLAHPPASR 189
Query: 479 -------------RFVT------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK--- 516
R FD + Y + D + G+ RH++ G++
Sbjct: 190 MEGLVAFLTEGVERLAPISLRLRFDPHFYRSNNPD--SSAGASDADLYRHWLGKGIQKGE 247
Query: 517 -------------EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
E R P++F Y L P HF + G++
Sbjct: 248 PASEAAALVRLLGEERYPESFDETAY---RSLLTEGVVPPPPGRLNALRHFIDTGFQ 301
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 43/132 (32%), Gaps = 26/132 (19%)
Query: 512 THGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--- 566
G + E F Y + DL D + K H+ + G EGR
Sbjct: 14 QFGRRISEAGRGGGFDPDFYRRYYPDLAILG----DESKVLKRHYLDHGRAEGRFPNAAA 69
Query: 567 ---------------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
F P+ Y YDDL + ++ ++HY+ G EGRA G
Sbjct: 70 LVAALEAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGADLSA 127
Query: 612 FKSVMNLSEKSR 623
F+ S
Sbjct: 128 FEQEYERMLASG 139
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 27/173 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG----------------RNPDAFKA 442
FD + Y + D + G+ RH++ G+++G R P++F
Sbjct: 213 FDPHFYRSNNPD--SSAGASDADLYRHWLGKGIQKGEPASEAAALVRLLGEERYPESFDE 270
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY---LGSYDDLRNVF 499
Y + L P HF + G + L + +
Sbjct: 271 TAYRSL---LTEGVVPPPPGRLNALRHFIDTGFQLWELEPVRQACSAQLLERIGEYHLLR 327
Query: 500 GSDRGA--AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQA 549
G+ A A + G+ GR AL + D AF +A D+ A
Sbjct: 328 GNAVEAKEAFDRALRGGLVSGRLHHRRGDALLRLNRTNDAARAFVNAADVPGA 380
>gi|45383954|ref|NP_990528.1| matrix metalloproteinase-16 [Gallus gallus]
gi|1519365|gb|AAB07491.1| membrane type-matrix metalloproteinase [Gallus gallus]
Length = 608
Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHIAYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 IELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|296106233|ref|YP_003617933.1| hypothetical protein lpa_01009 [Legionella pneumophila 2300/99 Alcoy]
gi|295648134|gb|ADG23981.1| hypothetical protein lpa_01009 [Legionella pneumophila 2300/99 Alcoy]
Length = 4669
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 3/184 (1%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
S + Y + T +DL +N +D S +G
Sbjct: 3822 SNSAADGTYNGS-TSDPFRYTNTTGSQSATAKVDLDRTQAGENRLDGTYRSEILLGRDTS 3880
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI + + ++G GND + G + +++ +GND DG +G DT Y + +
Sbjct: 3881 NDTIIGNDGNDILIGLGGNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTV 3940
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ + D L+++E L + + ++ + + + G D
Sbjct: 3941 SLNTSSA--QNTVGAGTDTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGND 3998
Query: 379 VFES 382
+
Sbjct: 3999 TLDG 4002
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 26/192 (13%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ GN+I + G+D LD YID S+
Sbjct: 3886 GNDGNDILIGLGGNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTVSLNTS 3945
Query: 257 EKNMTIAQHTV----IESVVGSSGNDVVIGNSANNV------------------FFESSG 294
T+ T IE++ GS ND + GN++ N SG
Sbjct: 3946 SAQNTVGAGTDTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGNDTLDGGSG 4005
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQCIDS 353
+DV G G D + + + + + + A + DF +++++ I
Sbjct: 4006 DDVIIGGLGDDILTGGSGADQFVLVKGQGGASAGAAPIDTITDFEVNIDKIVINGNNITG 4065
Query: 354 VNVKQRSILEYT 365
V+V YT
Sbjct: 4066 VSVSTPVSNTYT 4077
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++ G + N+ GND G G+DTFF+ + + D
Sbjct: 4520 LNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 4573
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ D SD L +D + +++ S+ Y
Sbjct: 4574 KANPVDKSSDASVLNLSD-LLSDADLETNSLDNYL 4607
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ N + + + G++GND + G N+ G D F SG D
Sbjct: 4510 SLTMLANNPELNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDD------ 4563
Query: 312 PSYLYKIYRFENAIIVYDANEHK---QDFLSDVE 342
+ I F+ + ++ D LSD +
Sbjct: 4564 DGGVDTITDFKANPVDKSSDASVLNLSDLLSDAD 4597
>gi|260820672|ref|XP_002605658.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
gi|229290993|gb|EEN61668.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
Length = 499
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 49/198 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-S 74
+ L YW + Y+ T + + + R A WS V LTF E
Sbjct: 118 YALVGYYWQKKNLTYRIVRTTPQLSPYVV-------HDAIRRAFNVWSDVTPLTFTEMFH 170
Query: 75 IHSDIK------FISSNNGYVCTPRY-------DSRYFMEINFDKADVWRYGIGKGTILS 121
+DI F N + R + +FD+ + W +G L
Sbjct: 171 GEADIMIDFLWGFHGDGNPFDGPGNTLAHAFFPGPRRGGDTHFDEEEKWTM-TKEGANLF 229
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GHALGL H +N ++M F +
Sbjct: 230 QVATHEFGHALGLGHSSEHN-------------------TIMGPF--------YRYRDPL 262
Query: 182 TPMVSDIVAVQKIYGAPK 199
DI +Q++YGAP+
Sbjct: 263 QLTEDDIRGIQQLYGAPE 280
>gi|158512138|gb|ABW69099.1| structural toxin protein [Legionella pneumophila]
Length = 4669
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 3/184 (1%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
S + Y + T +DL +N +D S +G
Sbjct: 3822 SNSAADGTYNGS-TSDPFRYTNTTGSQSATAKVDLDRTQAGENRLDGTYRSEILLGRDTS 3880
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI + + ++G GND + G + +++ +GND DG +G DT Y + +
Sbjct: 3881 NDTIIGNDGNDILIGLGGNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTV 3940
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ + D L+++E L + + ++ + + + G D
Sbjct: 3941 SLNTSSA--QNTVGAGTDTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGND 3998
Query: 379 VFES 382
+
Sbjct: 3999 TLDG 4002
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 26/192 (13%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ GN+I + G+D LD YID S+
Sbjct: 3886 GNDGNDILIGLGGNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTVSLNTS 3945
Query: 257 EKNMTIAQHTV----IESVVGSSGNDVVIGNSANNV------------------FFESSG 294
T+ T IE++ GS ND + GN++ N SG
Sbjct: 3946 SAQNTVGAGTDTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGNDTLDGGSG 4005
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQCIDS 353
+DV G G D + + + + + + A + DF +++++ I
Sbjct: 4006 DDVIIGGLGDDILTGGSGADQFVLVKGQGGASAGAAPIDTITDFEVNIDKIVINGNNITG 4065
Query: 354 VNVKQRSILEYT 365
V+V YT
Sbjct: 4066 VSVSTPVSNTYT 4077
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++ G + N+ GND G G+DTFF+ + + D
Sbjct: 4520 LNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 4573
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ D SD L +D + +++ S+ Y
Sbjct: 4574 KANPVDKSSDASVLNLSD-LLSDADLETNSLDNYL 4607
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ N + + + G++GND + G N+ G D F SG D
Sbjct: 4510 SLTMLANNPELNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDD------ 4563
Query: 312 PSYLYKIYRFENAIIVYDANEHK---QDFLSDVE 342
+ I F+ + ++ D LSD +
Sbjct: 4564 DGGVDTITDFKANPVDKSSDASVLNLSDLLSDAD 4597
>gi|103484506|dbj|BAE94745.1| membrane type-matrix metalloproteinase 16 [Gallus gallus]
Length = 609
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHIAYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 173 IELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|119492643|ref|ZP_01623822.1| hypothetical protein L8106_00030 [Lyngbya sp. PCC 8106]
gi|119452981|gb|EAW34152.1| hypothetical protein L8106_00030 [Lyngbya sp. PCC 8106]
Length = 642
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 83/236 (35%), Gaps = 28/236 (11%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--DSYLYLGS 407
+ V ++ Y A+ DL Q+ + + HF +GL EGR + Y
Sbjct: 37 GVVIQPVNLLNLAYYKANNPDLAQLSD---DQLVSHFQVYGLEEGRVFNSIINLNTYREL 93
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
DL N + H I G+ E R Y ++ DL + ++
Sbjct: 94 NTDLAN---LNNRELCEHLIDFGLSEERLFSPVVDLNYYQQNNSDLPDDWSS-----SQL 145
Query: 467 KDHFSNFGCEEGRFVTF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
+H + FG +E R + D Y DL + + S + H G+ E R
Sbjct: 146 LEHLTQFGLDENRLFSPLVDLNYYQQINSDLPDDWSSSQ--LLEHLTQFGLDENRLFSPL 203
Query: 525 KALEYIASHEDLINAFADAPDLVQAG--KDHFSNFGYEEGR--SITFNPDLYLTSY 576
L Y +D PD + +H + FG +E R S FN YL
Sbjct: 204 VDLNYYQQIN------SDLPDDWSSSQLLEHLTQFGLDENRLFSPVFNIQDYLDDN 253
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 79/235 (33%), Gaps = 32/235 (13%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
+ Y A++ DL HF +G EEGR + Y DL
Sbjct: 44 NLLNLAYYKANNPDLAQ------LSDDQLVSHFQVYGLEEGRVFNSIINLNTYRELNTDL 97
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG--KDH 553
N+ + H I G+ E R L Y + +D PD + +H
Sbjct: 98 ANL---NNRELCEHLIDFGLSEERLFSPVVDLNYYQQNN------SDLPDDWSSSQLLEH 148
Query: 554 FSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
+ FG +E R S + + Y DL + + S + +H G+ E R S +
Sbjct: 149 LTQFGLDENRLFSPLVDLNYYQQINSDLPDDWSSSQL--LEHLTQFGLDENRL--FSPLV 204
Query: 612 FKSVMNLSEKS-RDKADLSLSFDH------KKVDLYTDYFGDGNYYDSDLYSMHD 659
+ D S +H + L++ F +Y D + ++ +
Sbjct: 205 DLNYYQQINSDLPDDWSSSQLLEHLTQFGLDENRLFSPVFNIQDYLDDNFEAVTN 259
>gi|4096734|gb|AAC99995.1| matrix metalloproteinase RASI-1 [Homo sapiens]
Length = 308
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 61/188 (32%), Gaps = 45/188 (23%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + ++ L + A+ R A +WS V LTF+E + +DI
Sbjct: 23 GRWRKKHLTFRILNLPSTLPPHT-------ARAALRQAFQDWSNVAPLTFQEVQAGAADI 75
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ + W G +G L A HE+
Sbjct: 76 RLSFHGRQSSYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEV 135
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H Y + + + D+
Sbjct: 136 GHALGLGHSR--------------------------YSQALMAPVYEGYRPHFKLHPDDV 169
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 170 AGIQALYG 177
>gi|327269601|ref|XP_003219582.1| PREDICTED: matrix metalloproteinase-16-like [Anolis carolinensis]
Length = 610
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 122 YALTGQKWQHKHITYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPY 174
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 175 IELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 234
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 235 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 275
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 276 DNFK------LPNDDLQGIQKIYGPP 295
>gi|188580021|ref|YP_001923466.1| hypothetical protein Mpop_0753 [Methylobacterium populi BJ001]
gi|179343519|gb|ACB78931.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 294
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 60/183 (32%), Gaps = 28/183 (15%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR 419
L A Y + + + + H+ FG R+ + FD+ Y R G R
Sbjct: 28 LFDAAFYRERNPGVARSGLDPFLHYAWFGARRDRNPSADFDTAFY-------RRQSGRTR 80
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
RHY+ G +G +P F Y+A + D++ A + HF G EG
Sbjct: 81 LDPLRHYLKVGAAQGLDPSPAFSTSLYLARYPDVVAAGINP-------LLHFRTDGRAEG 133
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
R D G A H +T EG F S D
Sbjct: 134 REAAPSPIE-----PDRLRALD---GVAEEHLLTLPEAEG---GRFALTLLRQSPLDRAA 182
Query: 539 AFA 541
AFA
Sbjct: 183 AFA 185
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 57/170 (33%), Gaps = 28/170 (16%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR P F A Y + + + D H++ FG R + D
Sbjct: 23 GRVPKLFDAAFYRERNPGVARSGLDP-------FLHYAWFGARRDRNPSADFDTAF---- 71
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKD 552
R G R RHY+ G +G +P AF Y+A + D++ A +
Sbjct: 72 -YRRQSGRTRLDPLRHYLKVGAAQGLDPSPAFSTSLYLARYPDVVAAGINP-------LL 123
Query: 553 HFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
HF G EGR +P D A +H +T EG
Sbjct: 124 HFRTDGRAEGREAAPSPIE-----PDRLRAL---DGVAEEHLLTLPEAEG 165
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 48/155 (30%), Gaps = 22/155 (14%)
Query: 478 GRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
GR FD+ Y + G D HY G + RNP A F Y
Sbjct: 23 GRVPKLFDAAFYRERNPGVARS-GLD---PFLHYAWFGARRDRNPSADFDTAFYRRQSG- 77
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
D H+ G +G S F+ LYL Y D+ H
Sbjct: 78 --RTRLDP-------LRHYLKVGAAQGLDPSPAFSTSLYLARYPDVVAA----GINPLLH 124
Query: 594 YITHGMKEGRALGISGMQFKSVMNLSEKSRDKADL 628
+ T G EGR S ++ + L + +
Sbjct: 125 FRTDGRAEGREAAPSPIEPDRLRALDGVAEEHLLT 159
>gi|148360702|ref|YP_001251909.1| hypothetical protein LPC_2649 [Legionella pneumophila str. Corby]
gi|148282475|gb|ABQ56563.1| hypothetical protein LPC_2649 [Legionella pneumophila str. Corby]
Length = 6289
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 3/184 (1%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
S + Y + T +DL +N +D S +G
Sbjct: 5442 SNSAADGTYNGS-TSDPFRYTNTTGSQSATAKVDLDRTQAGENRLDGTYRSEILLGRDTS 5500
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI + + ++G GND + G + +++ +GND DG +G DT Y + +
Sbjct: 5501 NDTIIGNDGNDILIGLGGNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTV 5560
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ + D L+++E L + + ++ + + + G D
Sbjct: 5561 SLNTSSA--QNTVGAGTDTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGND 5618
Query: 379 VFES 382
+
Sbjct: 5619 TLDG 5622
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 26/192 (13%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ GN+I + G+D LD YID S+
Sbjct: 5506 GNDGNDILIGLGGNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTVSLNTS 5565
Query: 257 EKNMTIAQHTV----IESVVGSSGNDVVIGNSANNV------------------FFESSG 294
T+ T IE++ GS ND + GN++ N SG
Sbjct: 5566 SAQNTVGAGTDTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGNDTLDGGSG 5625
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQCIDS 353
+DV G G D + + + + + + A + DF +++++ I
Sbjct: 5626 DDVIIGGLGDDILTGGSGADQFVLVKGQGGASAGAAPIDTITDFEVNIDKIVINGNNITG 5685
Query: 354 VNVKQRSILEYT 365
V+V YT
Sbjct: 5686 VSVSTPVSNTYT 5697
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++ G + N+ GND G G+DTFF+ + + D
Sbjct: 6140 LNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 6193
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ D SD L +D + +++ S+ Y
Sbjct: 6194 KANPVDKSSDASVLNLSD-LLSDADLETNSLDNYL 6227
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ N + + + G++GND + G N+ G D F SG D
Sbjct: 6130 SLTMLANNPELNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD---GG 6186
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + + D LSD +
Sbjct: 6187 VDTITDFKANPVDKSSDASVLNLSDLLSDAD 6217
>gi|325276923|ref|ZP_08142610.1| hypothetical protein G1E_25356 [Pseudomonas sp. TJI-51]
gi|324097938|gb|EGB96097.1| hypothetical protein G1E_25356 [Pseudomonas sp. TJI-51]
Length = 758
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/302 (20%), Positives = 96/302 (31%), Gaps = 60/302 (19%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y G HY+T G G NP F + Y+ + DL
Sbjct: 11 FDNKYYKSQ----TAAKGIYPKNFIEHYLTEGWTSGFNPHPCFDTVFYLKHNPDL----- 61
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT-HGVK 516
DL+ HF +G E RF D L Y L + +H+ +G
Sbjct: 62 --KDLIIHPFLHFIMYGYREHRFTRAD--FSLSEYRLLHPEIEENDINPLKHFTMKYGQT 117
Query: 517 E----------------GRNPD----------AFKALEYIASHEDLINAFADAPDLVQAG 550
R+ F Y ++ AFA D +
Sbjct: 118 ARAKNGEKASTIKDKLSNRDISSILAKAKSLQLFDFEWYKKTYNP---AFASELDAFKD- 173
Query: 551 KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG---- 606
H S F S F+ ++Y D+++ + + HYI G EGRA
Sbjct: 174 YLHKSRFSPV-NPSENFDNEIYHRCNIDVFHA----QISPLFHYIISGQTEGRAYSSVMP 228
Query: 607 --ISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNY-YDSDLYSMHDI-NH 662
+ L+ K+ ++ H D Y + F + Y + +++ + I N
Sbjct: 229 KWTPKFEINPASELTPKASNQKIAICL--HIYYDDYIERFAEALYTFPTEVDLLITIANE 286
Query: 663 DF 664
F
Sbjct: 287 SF 288
>gi|301604612|ref|XP_002931938.1| PREDICTED: stromelysin-3-like [Xenopus (Silurana) tropicalis]
Length = 478
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 63/195 (32%), Gaps = 48/195 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
+L W + YK + + AL WS+V LTF E
Sbjct: 88 VLSGGRWDKTNLTYKIIRFPWQLSKVKV-------RRTIAEALMVWSEVTPLTFTEVHEG 140
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
SDI + + +D + +++FD + W G GT L
Sbjct: 141 RSDIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDEAWTIGNNIGTDLLQ 200
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH LGL H S S+MS F +F Y +
Sbjct: 201 VAAHEFGHMLGLQHS-------------------SVSKSLMSPF--------YTFRYPLS 233
Query: 183 PMVSDIVAVQKIYGA 197
D +Q +YGA
Sbjct: 234 LSADDKHGIQFLYGA 248
>gi|240948247|ref|ZP_04752633.1| hypothetical protein AM305_05324 [Actinobacillus minor NM305]
gi|240297286|gb|EER47827.1| hypothetical protein AM305_05324 [Actinobacillus minor NM305]
Length = 1965
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 18/220 (8%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQ 192
P N V ++ N +F T+++ P D + G T +
Sbjct: 1136 PDDDNAIGDVKFGESSTLNYTFNTTLLKGENPNGQWKLQFFDVATGSTGTLHDWSLSFYG 1195
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWS 251
+ YGA ++ Y + ++ I T+ D+ GG D ++ + GV ++L+T +
Sbjct: 1196 RAYGA------DDTYVYTDEFHNNQAINTLNDTNGGIDTINAAAMDGVIE-VNLSTGKAN 1248
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G +TI IE+V G ND + GN A NV GNDV G G D
Sbjct: 1249 LAGKV---LTITNSQQIENVTGGDYNDKLTGNKAANVLIGGRGNDVLVGLEGNDVLVGGL 1305
Query: 312 PSYLYKIYRFENAIIV---YDANEHKQDFLSDVERLRFAD 348
+ + + I+ ++ + DF +RL F
Sbjct: 1306 GNNTLTGSQGNDTFIIEKKLNSQDVITDFSVGADRLVFTG 1345
Score = 80.5 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 14/170 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSI 253
G G+++ S F++ G+D + ++ ++I N I
Sbjct: 445 GGRGDDV--FISSGNSSIFVR---GGDGNDTIVGSIANDALSGENGDDFISGNAGKD-LI 498
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G+ N + + + G S +D++ G ++ G+D DG G DT +
Sbjct: 499 RGHRGNDRLFGDDGNDVIFGGSDDDMLYGGEGDDTLVGEGGDDYLDGGEGKDTAEFSGDF 558
Query: 314 YLYKIYRFENAIIVYDAN--EHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
YKI + + +++ D DFL ++E L F D
Sbjct: 559 ADYKITKMGDGLLISDTRQGRDGTDFLRNIEMLNFKDITNYQAPATNNEW 608
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 69/216 (31%), Gaps = 43/216 (19%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT---VIE----- 269
+ TI + G+D L IG N ID + + S G + + I + V+E
Sbjct: 1639 LVHTIVGTNGNDTLKGNAIG---NLIDGRSGADSMSGEFGDDTYIVDNVGDKVLEIKDGG 1695
Query: 270 ---------------------------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ +G+S N+ ++GNS NN +G D G
Sbjct: 1696 YDLVKSSVSYTLSNYVEEIQLMGNVAINAIGNSENNRLVGNSGNNRLDGKAGFDTMIGGL 1755
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSI 361
G DT+ S+L K+ N + +VE + + + +
Sbjct: 1756 GNDTYIVD--SHLDKVIEKVNQGTDTVISSVSYTLPENVEHVELIGNAHVSATGNDVNNS 1813
Query: 362 LEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGR 395
L + LI G D M F G
Sbjct: 1814 LTGNSGNNRLIGYGGNDSLNGMGGNDFLMGGAGNDT 1849
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 19/144 (13%)
Query: 207 YKIEVQQKDS---PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
Y + F + + G+D L GG + I + G N I
Sbjct: 1403 YGFSNNNAEVALPDFGVAFWGTEGEDRL----FGGNGDDI---------LRGGRGNDVIV 1449
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S G GND + GN ++ GND G +G D + + + ++
Sbjct: 1450 GEHSADSATG--GNDTLYGNDGDDRILGGGGNDTLLGGAGSDYLGGGVGNDVLYLE-GDD 1506
Query: 324 AIIVYDANEHKQDFLSDVERLRFA 347
++ + LS + F+
Sbjct: 1507 TALLPTYRNQQYTTLSQYNNVEFS 1530
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+ N+ + GNS NN GND +G G D A + Y R + +YD
Sbjct: 1805 ATGNDVNNSLTGNSGNNRLIGYGGNDSLNGMGGNDFLMGGAGNDTYHFKRGDGIDTIYDE 1864
Query: 331 NEHKQDFLSDVER 343
+ +++
Sbjct: 1865 QGNDTLRFTNINH 1877
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 71/237 (29%), Gaps = 27/237 (11%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIY---------GAPKGSLGNNIYK------IE 210
+ ++ G T I A+ Y G + GN + +
Sbjct: 253 WQDKNHNGLTDSGELQTLSSLGITAIDLTYQEMGGQLFSGNELLAKGNFTHNGKKQEAVA 312
Query: 211 VQQKDSPFIQTIYD-SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
V +P TI + +GG + ID T S+++ +++ Q VI
Sbjct: 313 VNFLANPRGHTITNIAGGKKTV-----TEGSGLID-GTSSFTATDNQNRDLNARQLGVI- 365
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ +GND++ G++ NN G D F G G D I+ IV
Sbjct: 366 NIQAGNGNDILRGDAQNNWLAGGGGADTFYGGDGDDVLLIDGDDLPENIHGGNGDDIVQV 425
Query: 330 ANEHKQDFLSDVERLRFADQCIDS----VNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + A + + + ++ I D
Sbjct: 426 IGDKSVSLDLGRAEIEIAHGGRGDDVFISSGNSSIFVRGGDGNDTIVGSIANDALSG 482
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + V S+ G+SGN+ +IG N+ GND G +G DT+ + + IY
Sbjct: 1803 VSATGNDVNNSLTGNSGNNRLIGYGGNDSLNGMGGNDFLMGGAGNDTYHFKRGDGIDTIY 1862
Query: 320 RFENAIIV 327
+ +
Sbjct: 1863 DEQGNDTL 1870
>gi|18158443|ref|NP_542954.1| matrix metalloproteinase-16 [Rattus norvegicus]
gi|2424973|dbj|BAA22223.1| MT3-MMP-del [Rattus sp.]
Length = 547
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 63/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 120 YALTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPY 172
Query: 76 HS--------DIKFIS------------SNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
DI I G++ + + +FD + W G
Sbjct: 173 SELENGKRDVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 233 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMET 273
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 274 DNFK------LPNDDLQGIQKIYGPP 293
>gi|118589155|ref|ZP_01546562.1| fat protein-possibly involved in cell-cell attachment [Stappia
aggregata IAM 12614]
gi|118438484|gb|EAV45118.1| fat protein-possibly involved in cell-cell attachment [Stappia
aggregata IAM 12614]
Length = 2332
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 23/153 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYD---SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++ Y + P + +I + G+D+LD+T S Y +M
Sbjct: 1904 DDTYSDMHAEASGPRLVSIENVNLGAGNDILDMT----------------SDTHTYTTDM 1947
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ + + +GND ++G N+ F +GND DG +G DT Y Y I +
Sbjct: 1948 TVDGGVGNDVIWTGAGNDTILGGEGNDTLFGGAGNDRLDGGAGTDTAIYSGNWEDYDIVQ 2007
Query: 321 FENA----IIVYDANEHKQDFLSDVERLRFADQ 349
++ + D +S+VE RFAD
Sbjct: 2008 NDDGSYTITDLRTDAPDGVDTVSNVETYRFADG 2040
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 74/213 (34%), Gaps = 48/213 (22%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQ------TIYDSGGDDLL------DLTLIGGVKNYID 244
A GN+ +D I TIY G+D + D+ G ++ID
Sbjct: 1455 AETSITGNDSADTITAHEDGSTIYSGAGDDTIYGGAGNDTILFGEGADVVYGGAGDDFID 1514
Query: 245 LNTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---- 295
+ + G G + N T+ + ++++G SGND + G + ++ +GN
Sbjct: 1515 DERGTQPNTGDNYLDGGDGNDTMYGGSGNDTLIGGSGNDTLHGENDDDTLQGDAGNDKLY 1574
Query: 296 -----------------------DVFDGSSGLDTFFYYAPSYLYKIYRFENA----IIVY 328
D DG +G DT Y Y I + +
Sbjct: 1575 GEAGNDTLDGGDGDDILKGGSGDDSIDGGTGTDTVIYSGNRSDYDITENADGSYTVVDTR 1634
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
D + +VE RFAD + + ++ + I
Sbjct: 1635 TGASEGTDTVINVETFRFADGDVLAGDLVAKDI 1667
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 28/200 (14%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWS 251
+ + Y+ + D I+ I+D+ G+ L G +Y+D + T W+
Sbjct: 746 SNFTATDGGTYRFSTRSDDGSTIE-IFDAYGNRLTFTNQNGSQTDYLDNDYHQSATTRWA 804
Query: 252 SIGGYEKNMTIAQHTVIESVV-----------GSSGNDVVIGN--------SANNVFFES 292
+ + V E+ G + D+ + ++
Sbjct: 805 DVDLEPGEIYTIVVKVWENQGKEVLEATVTPPGGAAEDLFTSDFVSTAAVVPGDDTLTGG 864
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD---ANEHKQDFLSDVERLRFADQ 349
+G+D DG G DT Y Y I E V D + D + +VE RFAD
Sbjct: 865 AGDDTIDGGLGTDTAVYSGNFTDYTITESEGVFTVTDNRPGSPDGTDTVVNVENFRFADG 924
Query: 350 CIDSVNVKQRSILEYTASYE 369
+ ++ + I T
Sbjct: 925 DYLAGDLIAQDITAVTDGNS 944
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 6/121 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND 278
++ GGDD + G + ID + + G N I + + G +GND
Sbjct: 2168 YSVDGVGGDDTI---TTGDFDDRIDGGANGGNDTLDGGGGNDLIFGRGGADDIYGGAGND 2224
Query: 279 VVIGNSANNVFFESSGNDVF-DG-SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+IG + N+ G+D+F G G DT A + + + A ++ D
Sbjct: 2225 TIIGGTGNDTLNGGDGSDLFMYGLGDGSDTINAGAGAGWTDVIDLGGGPGITSAGVYETD 2284
Query: 337 F 337
+
Sbjct: 2285 W 2285
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+SI G + TI H +V G+ GND + GN A + G+D +G +G DT F
Sbjct: 621 TSITGGSGDDTIVVHADGGTVDGAEGNDTISGNDAADRLAGGEGDDTIEGGAGNDTIFGE 680
Query: 311 ----APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ ++ Y++Y + A + L D
Sbjct: 681 NAPVSGTWHYQVYDHNFSGEAGQAGDISSGTLID 714
>gi|291567294|dbj|BAI89566.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2218
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 11/172 (6%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGS 274
I+ G+D L + TL G N DL + I G + N TI+ + + G
Sbjct: 1994 IFGEAGNDTLIGGPGNDTLFGNQGN--DLIFGGSGNDEIYGGQGNDTISGGGGNDLIFGG 2051
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + GN NN F + GND G SG D + + L I+ ++ +
Sbjct: 2052 LGDDFIEGNEGNNTLFGNQGNDTIFGGSGDDLIYGGQGNDL--IHGGSGNDTLFGDAGND 2109
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
F + + L F + D + + + D + ++ F
Sbjct: 2110 TIFGEEGDDLIFGGEGDDILIGAEGNDTLTGGEGRDRFVIAATHGTNTITDF 2161
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 17/158 (10%)
Query: 200 GSLGNN-IYKIEVQQK--DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESW 250
G+ GN+ I+ + TI GG+DL+ D N + N +
Sbjct: 2014 GNQGNDLIFGGSGNDEIYGGQGNDTISGGGGNDLIFGGLGDDFIEGNEGNNTLFGNQGND 2073
Query: 251 SSIGG--------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ GG + N I + +++ G +GND + G +++ F G+D+ G+
Sbjct: 2074 TIFGGSGDDLIYGGQGNDLIHGGSGNDTLFGDAGNDTIFGEEGDDLIFGGEGDDILIGAE 2133
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G DT + I + D + L D
Sbjct: 2134 GNDTLTGGEGRDRFVIAATHGTNTITDFTVGQDMILLD 2171
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 62/171 (36%), Gaps = 16/171 (9%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++G ++ I L + + ++N I ++++G GND + GN N++ F
Sbjct: 1964 DDVIVGTEEDDIILAGQGDDIVIAGDRNNLIFGEAGNDTLIGGPGNDTLFGNQGNDLIFG 2023
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SGND G G DT + L F + + L F +Q
Sbjct: 2024 GSGNDEIYGGQGNDTISGGGGNDL----IFGGLGDDFIEGNEGNNTL-------FGNQGN 2072
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE---FGLSEGRDITF 399
D++ L Y DLI G FG EG D+ F
Sbjct: 2073 DTIFGGSGDDLIYGGQGNDLIHG-GSGNDTLFGDAGNDTIFG-EEGDDLIF 2121
>gi|149716844|ref|XP_001498924.1| PREDICTED: similar to matrix metalloproteinase-12 [Equus caballus]
Length = 470
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 70/192 (36%), Gaps = 49/192 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W +FI Y+ T D+ + A WS V L F + + +DI
Sbjct: 110 WKKHFITYRIKNYTPDMKPEDVDY-------AIQKAFQVWSDVTPLKFRKINTGEADIMI 162
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
++ + +D R + + +FD+A++W KGT L A+HE+
Sbjct: 163 QFAHGAHGDYSPFDGRNGILAHAFGPGPGIGGDTHFDEAEIWTKSY-KGTNLFLVAVHEL 221
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y SY + A D
Sbjct: 222 GHSLGLGHSHDPKAIMFPTY----------------SYIDLSTFRLSA----------DD 255
Query: 188 IVAVQKIYGAPK 199
I +Q +YGAP+
Sbjct: 256 IRGIQSLYGAPE 267
>gi|283852042|ref|ZP_06369317.1| peptidase M10A and M12B matrixin and adamalysin [Desulfovibrio sp.
FW1012B]
gi|283572592|gb|EFC20577.1| peptidase M10A and M12B matrixin and adamalysin [Desulfovibrio sp.
FW1012B]
Length = 342
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 17/169 (10%)
Query: 38 HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG--------YV 89
+ ++ + ALG+ +K+ LTF +T+ S +
Sbjct: 170 SFDPVNFAAMDQAERNSVATALGDCAKITGLTFVQTTDASAANILFGTANLDPGVAGEAY 229
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
Y+ + E+ D Y + +HEIGHA+GL HP + P
Sbjct: 230 YPSSYNGKVVSEVFIDNDQYHTYNPSTDSW-YQVVIHEIGHAVGLKHPFEGSITLPS--- 285
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
D+ ++MSY + + Y D++A+Q IYG
Sbjct: 286 ----SLDTMENTIMSYTYTPGTTQEYIAKYNH-YQEYDVLALQYIYGTD 329
>gi|329850883|ref|ZP_08265728.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841198|gb|EGF90769.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1095
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 66/220 (30%), Gaps = 28/220 (12%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDS-PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A +YG + IY E + TI D+ G D L+ +DL
Sbjct: 535 ATLTVYGDAPTNDSEYIYTNEFGVLAGMDYGFTIIDTAGIDTLNA-AAVTAAAVLDLRGI 593
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + I G +TIA T+IE G G DV GN A N G+D G +G DT
Sbjct: 594 APAVINGMA--VTIAPGTLIEHAWGGDGGDVFHGNGAANRLNGMRGSDTIHGGAGDDTLS 651
Query: 309 YYAPSY------------------------LYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A + ++ D L E L
Sbjct: 652 GGAGDDYVHGGAGNDELSGGDGIDRLSYEGATTGVTVDLSLTTGQETGAGLDKLFGFEVL 711
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + +++ ++ + G D
Sbjct: 712 QGSGHDDRLTGSAASNVISAGGGHDTVEGGDGNDTLVGGA 751
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 59/194 (30%), Gaps = 8/194 (4%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNV 288
+DL+L G + L+ + + + +V+ G+D V G N+
Sbjct: 687 TVDLSLTTGQETGAGLDKLFGFEVLQGSGHDDRLTGSAASNVISAGGGHDTVEGGDGNDT 746
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII---VYDANEHKQDFLSDVERLR 345
+G D +G +G+D Y ++ N + + + D + E +
Sbjct: 747 LVGGAGGDRLNGGAGVDRLSYADSVAGVRVLLTANVVTGLPLSLGGHAQGDVIDGFEDVT 806
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ L ++ L+ G D + G D +
Sbjct: 807 GGSGNDTLGGDNGDNRLTGGGGHDALLGEAGDDDLDGGAGDDALSGGVGNDQLYG----R 862
Query: 406 GSYDDLRNVFGSDR 419
D+L G D
Sbjct: 863 DGNDNLAGAEGHDT 876
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 49/186 (26%), Gaps = 13/186 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+ I E S D+ G D D L GG + L + G + +
Sbjct: 796 GDVIDGFEDVTGGSGN-----DTLGGDNGDNRLTGGGGHDALLGEAGDDDLDGGAGDDAL 850
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT--------FFYYAPSY 314
+ + + G GND + G ++ G+DV G G D
Sbjct: 851 SGGVGNDQLYGRDGNDNLAGAEGHDTVDGGGGHDVVSGGDGDDRVSGGDGHDMVGGRAGN 910
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y N + + + L L + L
Sbjct: 911 DYLDGGLGNDTVFGGDGDDGAYGRDGDDNLSGELGRDTLDGGSGNDTLSGGGDDDRLSGG 970
Query: 375 IGQDVF 380
+G D
Sbjct: 971 LGSDQI 976
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 32/163 (19%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-------------- 297
++ G + ++ + V G G+D+V G + N+ GND
Sbjct: 876 TVDGGGGHDVVSGGDGDDRVSGGDGHDMVGGRAGNDYLDGGLGNDTVFGGDGDDGAYGRD 935
Query: 298 -------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE----HKQDFLSD 340
DG SG DT + I N+ + D ++
Sbjct: 936 GDDNLSGELGRDTLDGGSGNDTLSGGGDDDRLSGGLGSDQIRGGSGNDVFVYRQADVMAT 995
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ AD +D + + +Y I I ++
Sbjct: 996 GDAHAAADMLLDFLP-RAHPYQQYDRIDLRAIDAIDGGANDAF 1037
>gi|130487232|ref|NP_001076240.1| macrophage metalloelastase precursor [Oryctolagus cuniculus]
gi|3023531|sp|P79227|MMP12_RABIT RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|1839256|gb|AAB46993.1| macrophage metalloelastase MMP-12 precursor [Oryctolagus cuniculus]
Length = 464
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKF 81
W ++I Y+ T D+ + + A WS V L F + T+ +DI
Sbjct: 104 WRKHYITYRIKNYTPDMKREDV-------EYAIQKAFQVWSDVTPLKFRKITTGKADIMI 156
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
+ ++ + +D R + + +FD+ ++W KGT L A+HE+
Sbjct: 157 LFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWSKSY-KGTNLFLVAVHEL 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H +M P +D + + + DI
Sbjct: 216 GHALGLDHSNDPKA-------------------IM---FPTYGYIDLNTFHLS---ADDI 250
Query: 189 VAVQKIYGAPKGS 201
+Q +YG P+
Sbjct: 251 RGIQSLYGGPEQH 263
>gi|307941953|ref|ZP_07657306.1| proprotein convertase P [Roseibium sp. TrichSKD4]
gi|307774859|gb|EFO34067.1| proprotein convertase P [Roseibium sp. TrichSKD4]
Length = 3659
Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+I+G +Y E + + T+ D G D+++ + I IDL+ +WS
Sbjct: 1729 RIFGEQASQDDLYVYTGEFSDQSNGDSLTVSDGDGYDIVNTSAI-LEDVIIDLSGFNWSK 1787
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + IE+V GND++ GN NN+ F G+D+ G++G D F
Sbjct: 1788 ISGQP--VVFNEGASIETVYAGDGNDLISGNKLNNILFGGRGHDLLRGNTGDDIIFGGNG 1845
Query: 313 SYLYKIYRFENAIIVYD-----ANEHKQDFLSDVERLRFAD 348
+ + + A ++ + D LS E + D
Sbjct: 1846 DDIIQYTIGDGADVIESFYLGRSMAQGMDTLS-FEGIGADD 1885
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 16/156 (10%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
Q+I + G D D+ GG + ++ + I G + I H +++ G GND+
Sbjct: 1005 QSIINGGAGD--DIIFGGGADDVLNGEEGKDA-IYGNSGDDLIRGHRGADTLEGGLGNDI 1061
Query: 280 VIGNSANNVFFESSGNDVFDGS---------SGLDTFFYYAPSYLYKIYRFENAIIV--- 327
+ G +V +G D+ G G D Y Y + +
Sbjct: 1062 LQGGLGEDVLRGGAGEDLLTGGQGDDHLHGGGGYDVAEYSGSYADYIVTSNLDGTYTVTD 1121
Query: 328 -YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + D LSDVE L FAD ++ +
Sbjct: 1122 RRNGSPDGADRLSDVEALNFADINEVQIDGDNPLPV 1157
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 7/134 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N + + + G SG D +IG + +SG+D+ G +G DTF++
Sbjct: 3528 DVSGESGNDYLNGKDGNDYLYGGSGADRIIGGEGADWLEGNSGSDLLVGGAGDDTFYFGY 3587
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ I F+ D + +S E ++ +Q + + + D
Sbjct: 3588 NFDMDTIADFQAGPAAGDVIQLDNLRVSSFE-------EAVALAEQQENDVVFDFGRGDT 3640
Query: 372 IQVIGQDVFESMKH 385
+ ++G ++
Sbjct: 3641 LTLLGVNLSNLTSD 3654
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 18/216 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+D + I + G+D L G ++D+ N A V
Sbjct: 2403 GTTWTARDIALLTPIEGTNGNDYL----TGSHTVWLDVIVGGRGDDTIRGANSRYASLDV 2458
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ ++G SG+D + G + ++V G+D +G +G D + +A
Sbjct: 2459 EDVLIGGSGDDKLYGYAGSDVLDGGYGDDFLNGGAGEDRLEGGEGNDRL----LGDADAD 2514
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ D E + V++ + D++ I + S
Sbjct: 2515 VIIGGNGID-----EVYYYTSNAAVIVDLNDALPEHGGHAEGDVLFSIENILGSSYADTL 2569
Query: 388 EFGLSEGRDIT----FDSYLYLGSYDDLRNVFGSDR 419
G EG I D LG DDL+ G+D
Sbjct: 2570 R-GDDEGNSIDGYYGDDLLYGLGGDDDLKGAAGNDT 2604
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+SI GY + + + + G++GND + G + +++ + G+D G G D
Sbjct: 2576 NSIDGYYGDDLLYGLGGDDDLKGAAGNDTIYGGAGSDLIYGGYGDDYVVGGLGDDHLQGG 2635
Query: 311 APSYLYKIYRFENAIIVYDANEHKQ---DFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+YK Y + ++ D D +S E + D+ + Q ++ EY+ S
Sbjct: 2636 GGHDVYKYYHGDGNDVISDFKGVNIIDFDNISSTEVIF--DRIGYNGADLQINVGEYSDS 2693
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 26/211 (12%)
Query: 200 GSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G +G+++ + Q S T++ GG+D L + ++ + + +
Sbjct: 912 GGIGDDVLTGDDQNNWLVGSLGSDTLHGGGGNDYLVADAADISVSQSNVQGGTGFDVAQF 971
Query: 257 EKNMTIAQH---TVIESVVG-------------------SSGNDVVIGNSANNVFFESSG 294
+ I + + +E +G +G+D++ G A++V G
Sbjct: 972 VGDQGIIFNLQKSQVEMAIGTDHADILSSGSSEQSIINGGAGDDIIFGGGADDVLNGEEG 1031
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D G+SG D + + + N I+ E + + L
Sbjct: 1032 KDAIYGNSGDDLIRGHRGADTLE-GGLGNDILQGGLGEDVLRGGAGEDLLTGGQGDDHLH 1090
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ EY+ SY D I D ++
Sbjct: 1091 GGGGYDVAEYSGSYADYIVTSNLDGTYTVTD 1121
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 43/115 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +++ G +G+D++ G ++ G+D G G D + YY
Sbjct: 2587 LYGLGGDDDLKGAAGNDTIYGGAGSDLIYGGYGDDYVVGGLGDDHLQGGGGHDVYKYYHG 2646
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
I F+ I+ N + + D AD I+ +++Y
Sbjct: 2647 DGNDVISDFKGVNIIDFDNISSTEVIFDRIGYNGADLQINVGEYSDSIVVKYYFD 2701
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 232 DLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D T+ G + +N S I G KN + V G SGND + G N+ +
Sbjct: 3489 DGTIWGHEELLSKINEFQVSGIHYGTSKNDVYFGGENTDDVSGESGNDYLNGKDGNDYLY 3548
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
SG D G G D + S + Y D ++D + A
Sbjct: 3549 GGSGADRIIGGEGAD--WLEGNSGSDLLVGGAGDDTFYFGYNFDMDTIADFQAGPAAGDV 3606
Query: 351 IDSVNVKQRSI 361
I N++ S
Sbjct: 3607 IQLDNLRVSSF 3617
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 20/186 (10%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
I G D + +DLN G E ++ + IE+++GSS D
Sbjct: 2513 ADVIIGGNGIDEV-YYYTSNAAVIVDLNDALPEHGGHAEGDVLFS----IENILGSSYAD 2567
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G+ N G+D+ G G D A + + A + D++
Sbjct: 2568 TLRGDDEGNSIDGYYGDDLLYGLGGDDDLKGAAGND----TIYGGAGSDLIYGGYGDDYV 2623
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
D Y + D VI ++ F +E +
Sbjct: 2624 VG--------GLGDDHLQGGGGHDVYKYYHGDGNDVISDFKGVNIIDFDNISSTE---VI 2672
Query: 399 FDSYLY 404
FD Y
Sbjct: 2673 FDRIGY 2678
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 7/148 (4%)
Query: 238 GVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G I+L S + ++G + + +++G G+DV+ G+ NN S G+D
Sbjct: 876 GQGIRIELEDGSATYTVGDANGEIVTSSDKGATNLIGGIGDDVLTGDDQNNWLVGSLGSD 935
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQC 350
G G D A + A + VE D
Sbjct: 936 TLHGGGGNDYLVADAADISVSQSNVQGGTGFDVAQFVGDQGIIFNLQKSQVEMAIGTDHA 995
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + +D+I G D
Sbjct: 996 DILSSGSSEQSIINGGAGDDIIFGGGAD 1023
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVY 328
V G+ G+D ++G ++VF G+DV G SG D F Y I + +
Sbjct: 2273 VRGTDGDDTLLGTDLDDVFEGGRGDDVIYGFSGNDQFLYAEGDGNDVIKATIDQPGQQIL 2332
Query: 329 DANEHKQDFLSD 340
A D L
Sbjct: 2333 GAAALGDDMLVF 2344
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI--YRFENAIIVYD 329
+G D+V G +A++V F GND G +G D + + + N I++ D
Sbjct: 3384 RAGAGADIVNGTNADDVIFGGIGNDTLRGGAGDDIYLFSKGDGQDIVSDISGNNHIVLLD 3443
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + + E ++ + + ++
Sbjct: 3444 VTDSEVEVERVGESIKLIVTNTEDTVLVSNALQ 3476
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY----RFENA 324
E + G+ G+D++ G + N+VF G+D G G D + + KI E
Sbjct: 2125 EIIRGTRGDDLLQGTNNNDVFRGGLGDDTLFGGDGDDVYLWKKGDGNDKIAASSLSSEGD 2184
Query: 325 IIVYDANEHKQDFLSDVERL 344
A QD L + L
Sbjct: 2185 EYGVVAQGLGQDLLILEDVL 2204
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 26/67 (38%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ ND + G S +++ + GND G G DT+ Y ++ +
Sbjct: 3095 IYGTDDNDYLSGTSGDDIISGAQGNDTLAGGGGNDTYIYNRGDGNDEVLDRSGQNTLILK 3154
Query: 331 NEHKQDF 337
+ D
Sbjct: 3155 DIISSDV 3161
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 19/156 (12%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FD 299
I+ + G I +++ GS NDV+ ++ G+D F+
Sbjct: 2833 RINFADGVVWNKGDLAAQGAIFGSNASDNITGSYYNDVIEAGRGDDNLQGGYGDDTYIFN 2892
Query: 300 GSSGLDTFF-----------YYAPSYLYKIYRFENAIIVYDANEHK---QDFLSDVER-- 343
G+D APS + +Y E+ ++ N DFL +
Sbjct: 2893 SGDGVDQIIDGIGTNIVKVNGVAPSDVGVVYNSEDIVLELGGNGDSIVLDDFLPRWNQEI 2952
Query: 344 -LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++F D N L S D + G +
Sbjct: 2953 VIKFDDGTEWLRNNLLPDALSLMGSNSDEVLSGGHN 2988
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G N+ +SG+D+ G+ G DT + Y R + V D + L
Sbjct: 3095 IYGTDDNDYLSGTSGDDIISGAQGNDTLAGGGGNDTYIYNRGDGNDEVLDRSGQNTLILK 3154
Query: 340 DV 341
D+
Sbjct: 3155 DI 3156
Score = 44.0 bits (102), Expect = 0.077, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
GS+ ++V+ G +++ SG+D G G D + Y I A V
Sbjct: 2976 GSNSDEVLSGGHNDDLIEGGSGDDELRGGIGSDKYVYSLGDGNDVILDGNGANSVL 3031
Score = 40.9 bits (94), Expect = 0.71, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
V GSS D++ G + F +GND G G DTF + I
Sbjct: 1951 VKGSSEADLLYGTENDEKFNPGTGNDSVFGGGGNDTFLWKKGDGNDTI 1998
Score = 37.4 bits (85), Expect = 7.3, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 36/163 (22%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----------LNTESWSS 252
G+++YK I D G +++D I + D +N +S
Sbjct: 2637 GHDVYKY----YHGDGNDVISDFKGVNIIDFDNISSTEVIFDRIGYNGADLQINVGEYSD 2692
Query: 253 I----------------GGYEKNMTIAQHTVIE---SVVGSSGNDVV-IGNSANNVFFES 292
+ N + + E VVG+ +D++ +
Sbjct: 2693 SIVVKYYFDRQFSPIFSFNFADNAVLGFADLEEQFFHVVGTDQDDLLNYVLDGDYTITGG 2752
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIVYDANEH 333
+G+D S+G DTF Y I EN +I+ D N
Sbjct: 2753 AGDDTIVTSAGDDTFVYALGDGNDIIRDRLGENRLILEDINAD 2795
>gi|188580624|ref|YP_001924069.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
gi|179344122|gb|ACB79534.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
Length = 1301
Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 88/231 (38%), Gaps = 39/231 (16%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------------F 440
+FD Y Y DL + G DR +HY HG +EGR P+A F
Sbjct: 40 SFDPVFYRRYYPDL-AILGDDRKLLRQHYAKHGRREGRAPNAASLIAALEGESGPLPADF 98
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL---RN 497
Y A H+DL A + +L +H+ FG EGR D Y+ + R
Sbjct: 99 IPSHYRALHDDL-TALTEPWEL----GEHYLRFGRFEGRTYAADLSALEQEYEAMLASRA 153
Query: 498 VFGSDRGAA--ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ-AGKDHF 554
G R AA A ++ V +P A+ L + L A+ P + G F
Sbjct: 154 APGGLRLAARPAESFVQLLVGARVSPGAWLDLFMLHEFGLLNEAWLPRPPASRIEGLVVF 213
Query: 555 SNFGYEEGR------SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
G GR + F+PD Y ++ D G +H+++ G+
Sbjct: 214 LTEGV--GRLAPISLRLRFDPDFYRSNNPD--APVGIRDVDLYRHWLSEGV 260
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/329 (16%), Positives = 96/329 (29%), Gaps = 75/329 (22%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------------ 398
+ + Y Y DL ++G D +H+ + G EGR
Sbjct: 33 RALIGQGSFDPVFYRRYYPDL-AILGDDRKLLRQHYAKHGRREGRAPNAASLIAALEGES 91
Query: 399 ------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
F Y +DDL + ++ HY+ G EGR A +E +
Sbjct: 92 GPLPADFIPSHYRALHDDLTAL--TEPWELGEHYLRFGRFEGRTYAA-DLSALEQEYEAM 148
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL--------------YLGSYDDLRNV 498
+ + A L + S G V+ ++L +L
Sbjct: 149 LASRAAPGGLRLAARPAESFVQLLVGARVSPGAWLDLFMLHEFGLLNEAWLPRPP----- 203
Query: 499 FGSDRGAAARHYITHGVKEGRNPD-----AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ R ++T GV GR F Y +++ D D H
Sbjct: 204 --ASRIEGLVVFLTEGV--GRLAPISLRLRFDPDFYRSNNPDAPVGIRDVD-----LYRH 254
Query: 554 FSNFGY-----------------EEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
+ + G EE +F+ +Y + + R A +H++
Sbjct: 255 WLSEGVPKREPGTEAAALLQLIGEETFPESFDEAVYRSLLPEGVPPPPPGRLNALRHFMK 314
Query: 597 HGMKEGRALGISGMQFKSVMNLSEKSRDK 625
G + + ++ L E+ +
Sbjct: 315 LGFQ---LWELEPVRQACSAQLLEQIGEH 340
>gi|4520361|dbj|BAA75922.1| matrix metalloproteinase-12 [Oryctolagus cuniculus]
Length = 464
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 71/193 (36%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y+ T D+ + + A WS V L F + + +DI
Sbjct: 104 WRKHYITYRIKNYTPDMKREDV-------EYAIQKAFQVWSDVTPLKFRKITTGEADIMI 156
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
+ ++ + +D R + + +FD+ ++W KGT L A+HE+
Sbjct: 157 LFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWSKSY-KGTNLFLVAVHEL 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H +M P +D + + + DI
Sbjct: 216 GHALGLDHSNDPKA-------------------IM---FPTYGYIDLNTFHLS---ADDI 250
Query: 189 VAVQKIYGAPKGS 201
+Q +YG P+
Sbjct: 251 RGIQSLYGGPEQH 263
>gi|240137927|ref|YP_002962399.1| putative glycosyl transferase [Methylobacterium extorquens AM1]
gi|240007896|gb|ACS39122.1| putative glycosyl transferase [Methylobacterium extorquens AM1]
Length = 1296
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 82/232 (35%), Gaps = 31/232 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------------- 439
GR FD Y Y DL + G + RHY+ HG EGR P+A
Sbjct: 23 GRGGGFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVAALEAEGGAL 81
Query: 440 ---FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F Y A ++DL +H+ FG EGR D + Y+ +
Sbjct: 82 PSDFIPEHYRALYDDLAGLTEPW-----QLSEHYLRFGRFEGRAHGADLSAFEQEYERML 136
Query: 497 NVFGS-DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN-AFADAPDLVQAGKDHF 554
+ + A ++ V P A+ L + L P G F
Sbjct: 137 ASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLTHPPASRMEGLVAF 196
Query: 555 SNFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G E I+ F+P Y ++ D + G+ + +H++ G+++G
Sbjct: 197 LTEGVERLAPISLRLRFDPHFYRSNNPD--SSAGASDADLYRHWLGKGIQKG 246
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/297 (16%), Positives = 83/297 (27%), Gaps = 90/297 (30%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------ 398
+F + ++ Y Y DL ++G + +H+ + G +EGR
Sbjct: 14 QFGRRISEAGRGGGFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVA 72
Query: 399 ------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
F Y YDDL + ++ + HY+ G EGR A +
Sbjct: 73 ALEAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGA-DLSAFE 129
Query: 447 ASHEDLINAFAD-APDLVQVGKDHFSNFGC------------------EEG--------- 478
+E ++ + A H EG
Sbjct: 130 QEYERMLASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLTHPPASR 189
Query: 479 -------------RFVT------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK--- 516
R FD + Y + D + G+ RH++ G++
Sbjct: 190 MEGLVAFLTEGVERLAPISLRLRFDPHFYRSNNPD--SSAGASDADLYRHWLGKGIQKGE 247
Query: 517 -------------EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
E R P++F Y L A P HF + G++
Sbjct: 248 PASEAAALVRLLGEERYPESFDETAY---RSLLTEGVAPPPPGRLNALRHFIDTGFQ 301
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 43/132 (32%), Gaps = 26/132 (19%)
Query: 512 THGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--- 566
G + E F Y + DL D + K H+ + G EGR
Sbjct: 14 QFGRRISEAGRGGGFDPDFYRRYYPDLAILG----DESKVLKRHYLDHGRAEGRFPNAAA 69
Query: 567 ---------------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
F P+ Y YDDL + ++ ++HY+ G EGRA G
Sbjct: 70 LVAALEAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGADLSA 127
Query: 612 FKSVMNLSEKSR 623
F+ S
Sbjct: 128 FEQEYERMLASG 139
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 56/173 (32%), Gaps = 27/173 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG----------------RNPDAFKA 442
FD + Y + D + G+ RH++ G+++G R P++F
Sbjct: 213 FDPHFYRSNNPD--SSAGASDADLYRHWLGKGIQKGEPASEAAALVRLLGEERYPESFDE 270
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY---LGSYDDLRNVF 499
Y + L A P HF + G + L + +
Sbjct: 271 TAYRSL---LTEGVAPPPPGRLNALRHFIDTGFQLWELEPVRQACSAQLLERIGEYHLLR 327
Query: 500 GSDRGA--AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQA 549
G+ A A + G+ GR AL + D AF +A D+ A
Sbjct: 328 GNALAAKEAFDRALRGGLVSGRLHHRSGDALVRLNRTNDAARAFVNAADVPGA 380
>gi|291237328|ref|XP_002738587.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 525
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 77/215 (35%), Gaps = 46/215 (21%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ ++ WS + YK T + + A W+ V LTF E +
Sbjct: 134 YTIQGSKWSKTDLTYKFYSYTNQLTHGQV-------RSAIYRAFQLWADVSPLTFTEVAS 186
Query: 76 H-SDIKFISS----NNGYVCT-----PRYDSRYFM---EINFDKADVWRYGIGKGTILSH 122
+DI + ++GY + YF + +FD + + +GT L
Sbjct: 187 GDADINIEFARWTHSDGYAASFDGPGGTLAHAYFPENGDAHFDDDETFTVYSDEGTNLFI 246
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH+LGL H + G +Y Y D Y +PQD
Sbjct: 247 VAAHEFGHSLGLGHSNTQ--GALMYPWYQGYVPD--------YQLPQD------------ 284
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
DI+ +Q +YG P S + + + +P
Sbjct: 285 ----DIMGIQYLYGMPDVSRPDPDEGGDGSKPTNP 315
>gi|118592169|ref|ZP_01549562.1| VCBS protein [Stappia aggregata IAM 12614]
gi|118435141|gb|EAV41789.1| VCBS protein [Stappia aggregata IAM 12614]
Length = 1473
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 229 DLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D +D + + +N +IDL + S GG ++ IE+ +G+ +DV++GN N
Sbjct: 66 DTIDYSYLNDTENGIFIDLRSGIAVSKGGDIDLLS-----SIENAIGTVNDDVMLGNGLN 120
Query: 287 NVFFESSGNDVFDGSSGL-DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+FF + G+D+ DG G D + + Y I E+ V + L ++E ++
Sbjct: 121 NIFFGNGGSDIIDGRGGNKDVAQFVGKAEDYDIKTNEDG-SVSITKDGDTTTLYNIELVQ 179
Query: 346 FADQC-IDSVNVKQRSILEYTASYE--DLIQVIGQDVFESMKHFYEFG 390
F + + +++ + A + D+ + D E F G
Sbjct: 180 FGEGSEVGDIHLFSVTDGALVAHNDAIDVTETTDDDESEVAATFNVLG 227
>gi|312378823|gb|EFR25285.1| hypothetical protein AND_09518 [Anopheles darlingi]
Length = 530
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 77/204 (37%), Gaps = 26/204 (12%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---E 72
+ L+ W + Y+ E E+A+ A G WS+ DL F
Sbjct: 45 YALQGSRWKVKDLTYRISKYPKRL------ERTAVDNEIAK-AFGVWSRYTDLRFTPKRS 97
Query: 73 TSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++H DI+F + +G Y Y + +FD A+ W +GT L
Sbjct: 98 GAVHIDIRFEENEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDKPRGTNLFQV 157
Query: 124 ALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMD---ASFG 178
A HE GH+LGL H + + G D ++ DS +V S D D F
Sbjct: 158 AAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFQLDSDDVTV-SGTAVSDVQPDPVHFIFI 216
Query: 179 YCATPMVSDIV-AVQKIYGAPKGS 201
+ + I A+Q +YG +
Sbjct: 217 FIPFSLAHRISQAIQTLYGPRTRN 240
>gi|148548364|ref|YP_001268466.1| heme peroxidase [Pseudomonas putida F1]
gi|148512422|gb|ABQ79282.1| Animal haem peroxidase [Pseudomonas putida F1]
Length = 3619
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 13/174 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYD-----SGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+ GN+ + + + D GGDD LD G N L ++
Sbjct: 3414 NGNAGNDT--LNGDAGNDQLFGGLGDDQLRGGGGDDSLD----AGGGNDTLLGEAGNDNL 3467
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + ++ +++ G GND + G+ + +GND +G++G DT A +
Sbjct: 3468 NGGAGDDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAGNDFLNGAAGNDTVVGGAGN 3527
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + A D + + + + Q + + + AS
Sbjct: 3528 D--TLIATDGNDVFQFAAGFGNDLIINFDAIAAGGQDRLDITALNITAATFGAS 3579
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 57/194 (29%), Gaps = 16/194 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG--GVKNYIDLNTESWSSIGGYEKNM 260
GN+ Y ++ G DL+ TL N +L + G +
Sbjct: 3336 GNDTYVVDDAGDVVVEAT----GAGTDLVRTTLASHTTTANVENLAYTGVGNFTGTGNGL 3391
Query: 261 T--IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK- 317
I +++ G GNDV+ GN+ N+ +GND G G D
Sbjct: 3392 ANIIDGGAGNDTLSGDGGNDVLNGNAGNDTLNGDAGNDQLFGGLGDDQLRGGGGDDSLDA 3451
Query: 318 -------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ N + A + D + + L+ D L A +
Sbjct: 3452 GGGNDTLLGEAGNDNLNGGAGDDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAGNDF 3511
Query: 371 LIQVIGQDVFESMK 384
L G D
Sbjct: 3512 LNGAAGNDTVVGGA 3525
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 14/155 (9%)
Query: 238 GVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G L + + I G N T+ + + G GND++ G + GND
Sbjct: 3179 GTNGANTLTGGAGNDVISGLGGNDTLNGLGGSDQLFGGIGNDILNGGDDPDFLNGEDGND 3238
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRF 346
+G G D A + + + + V +A D + +VE L +
Sbjct: 3239 TLNGGLGADAMNGGAGNDTFLVDNAGD--TVTEALNGGTDQVQTSLASYTLGANVENLTY 3296
Query: 347 ADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ L A + L G D
Sbjct: 3297 TGSSAFTGTGNALANTLTGGAGNDLLNGGAGADRL 3331
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 41/108 (37%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I +++E ++ G N I + + G +G+D++ ++ GND
Sbjct: 2448 GTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGND 2507
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
V G +G++ + + I N+ ++ + +
Sbjct: 2508 VLHGGNGINLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDM 2555
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 43/142 (30%), Gaps = 17/142 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG + + ++V G +GND + G N+ +G+D+ G D
Sbjct: 2446 LGGTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDG 2505
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ I DF+ E D IL
Sbjct: 2506 ND----VLHGGNGINLIIGGFGNDFIVTGE-----DASEAIGGQGNDFILG--------S 2548
Query: 373 QVIGQDVFESMKHFYEFGLSEG 394
+ QD+ + E G S+G
Sbjct: 2549 KANEQDMGNEGDDWIEKGTSDG 2570
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 48/142 (33%), Gaps = 5/142 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
E ++ + + ++ S G+D + G++ +++ +GND G +G D
Sbjct: 910 HYTGEDHVVLGGTAGNDIIISSEGDDTLYGDAGDDLLEGGAGNDAVLGGAGDDIITDSFG 969
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ N +IV + + + + F D ++ + +
Sbjct: 970 DNRLE-GNAGNDVIVAGSMGVAGNLILGGDGQDFIITTEDISTTFGGLGDDFILGAKTNL 1028
Query: 373 QVIGQDVFESMKHFYEFGLSEG 394
G + + E G +G
Sbjct: 1029 PPTGNEGD----DWIEKGTQDG 1046
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 6/156 (3%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T++ G+D + + L GG + I + +I G + N + I ++G
Sbjct: 2462 DTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGNDVLHGGNGINLIIGG 2521
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND ++ + GND GS + + + A + +
Sbjct: 2522 FGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEKGTSDGAP-GDNFDPLG 2580
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
D + + ++ I+ + + D
Sbjct: 2581 NDPIIGNDVFVGGNENDKFNGEGGDDIMVGSLGFGD 2616
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSV 354
+ G+ DT Y S Y + N++ V D A D L+ +ERL+F+D S
Sbjct: 2792 ILSGTDDYDTAVYSGVSTDYSVVVDGNSVTVTDLVAGRDGVDHLTGIERLQFSDSSQASG 2851
Query: 355 NVKQRSILEYTA 366
+
Sbjct: 2852 VGTAVNAGPTGH 2863
Score = 43.6 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I +++E ++ G + + ++V+G +G+D++ + +N ++GND
Sbjct: 921 GTAGNDIIISSEGDDTLYGDAGDDLLEGGAGNDAVLGGAGDDIITDSFGDNRLEGNAGND 980
Query: 297 VFD----GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
V G +G + I + + DF+
Sbjct: 981 VIVAGSMGVAGN--LILGGDGQDFIITTEDISTTF---GGLGDDFILG 1023
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 17/140 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL----DLT-LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
I I G+D + D + IGG N L +++ G E + I +
Sbjct: 2506 NDVLHGGNGINLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEK 2565
Query: 265 HTVIESVVGSS----------GNDVVIGNSANNVFFESSGNDVFDGSSGL-DTFFYYAPS 313
T + G + GNDV +G + N+ F G+D+ GS G D + +
Sbjct: 2566 GTS-DGAPGDNFDPLGNDPIIGNDVFVGGNENDKFNGEGGDDIMVGSLGFGDRYIGGSGY 2624
Query: 314 YLYKIYRFENAIIVYDANEH 333
+ + ++
Sbjct: 2625 DWATFKDLAQGVSIDMSDRF 2644
>gi|323138326|ref|ZP_08073397.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322396409|gb|EFX98939.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 1339
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 59/329 (17%), Positives = 101/329 (30%), Gaps = 95/329 (28%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDL 411
++ + L TA Y + + + + + HF G ++G + FD YL L
Sbjct: 61 RQLRSQHPLFSTAYYLRIHAALQGTIRDPLVHFVTRGWTDGFNPYPLFDDEFYLPQLPAL 120
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
D HY+ +G ++ +F +Y+ E+ NA + HF
Sbjct: 121 ------DGLDPLTHYVANGWRQDLKAIPSFDPGDYVEHCEEQRNADVEP-------LAHF 167
Query: 471 SNFGCEEGRFVTFDSYLYLGS------------YDDLRNVFGSDRGAAARHYITHGV--- 515
+ +++ L +D++ + G D H G
Sbjct: 168 LTNRVQRRLRGSWNGEFGLTQLEFDRIQLLESEFDNIGSPDGDDAAVPITH-TESGSNPC 226
Query: 516 -----------------KEGR---------NPD---------AFKALEYIASHEDLINAF 540
+E + PD +F Y+ + D+ A
Sbjct: 227 KSEALQSHVPRPDVLAPQENQVAAPNTQTETPDHQSPVECDGSFDEELYLLCNPDVAQAI 286
Query: 541 ADAPDLVQAGKDHFSNFGYEEGR--------------------------SITFNPDLYLT 574
VQ+G H+ + G EGR + F+ Y
Sbjct: 287 ERG--AVQSGWAHWLSSGKSEGRDENPTICKDNLYGITPVRSNPDYDVVTRNFDAVEYSL 344
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
YDD+ G D+ QH+I G EGR
Sbjct: 345 IYDDIARALGFDQERCRQHWIAAGRHEGR 373
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 41/135 (30%), Gaps = 35/135 (25%)
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILE--------YTASYEDLIQVIGQDVFE-SMKHF 386
D L+ E A Q + Y D+ Q I + + H+
Sbjct: 239 DVLAPQENQVAAPNTQTETPDHQSPVECDGSFDEELYLLCNPDVAQAIERGAVQSGWAHW 298
Query: 387 YEFGLSEGRDIT--------------------------FDSYLYLGSYDDLRNVFGSDRG 420
G SEGRD FD+ Y YDD+ G D+
Sbjct: 299 LSSGKSEGRDENPTICKDNLYGITPVRSNPDYDVVTRNFDAVEYSLIYDDIARALGFDQE 358
Query: 421 AAARHYITHGVKEGR 435
+H+I G EGR
Sbjct: 359 RCRQHWIAAGRHEGR 373
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 76/274 (27%), Gaps = 93/274 (33%)
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLG-----SYDDLRNVFGSDRGAAA 423
L Q+ D + + H+ G + +FD Y+ D+
Sbjct: 114 LPQLPALDGLDPLTHYVANGWRQDLKAIPSFDPGDYVEHCEEQRNADVE---------PL 164
Query: 424 RHYITH-----------GVKEGRNPDAFKALEYIASHEDLINA--------------FAD 458
H++T+ G G F ++ + S D I +
Sbjct: 165 AHFLTNRVQRRLRGSWNGEF-GLTQLEFDRIQLLESEFDNIGSPDGDDAAVPITHTESGS 223
Query: 459 APDLVQVGKDHFSN---FGCEEGRFV-------------------TFDSYLYLGSYDDLR 496
P + + H +E + +FD LYL D+
Sbjct: 224 NPCKSEALQSHVPRPDVLAPQENQVAAPNTQTETPDHQSPVECDGSFDEELYLLCNPDVA 283
Query: 497 NVFGSDR-GAAARHYITHGVKEGRNPDA-------------------------FKALEYI 530
+ H+++ G EGR+ + F A+EY
Sbjct: 284 QAIERGAVQSGWAHWLSSGKSEGRDENPTICKDNLYGITPVRSNPDYDVVTRNFDAVEYS 343
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
++D+ A + + H+ G EGR
Sbjct: 344 LIYDDIARALGFDQERCR---QHWIAAGRHEGRY 374
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 20/144 (13%)
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
++E + FD+ Y + D+ A HYI G ++ R+ + Y
Sbjct: 25 IAETVHLLFDAVWYRMANSDVAPD-----DATILHYIREGRRQLRSQHPLFSTAYYLR-- 77
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ A ++ HF G +G FD YL L D
Sbjct: 78 -IHAALQ---GTIRDPLVHFVTRGWTDGFNPYPLFDDEFYLPQLPAL------DGLDPLT 127
Query: 509 HYITHGVKEG-RNPDAFKALEYIA 531
HY+ +G ++ + +F +Y+
Sbjct: 128 HYVANGWRQDLKAIPSFDPGDYVE 151
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 21/130 (16%)
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH 533
E + FD+ Y + D+ + A HYI G ++ R+ F Y+ H
Sbjct: 25 IAETVHLLFDAVWYRMANSDV-----APDDATILHYIREGRRQLRSQHPLFSTAYYLRIH 79
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
L D HF G+ +G F+ + YL L D
Sbjct: 80 AALQGTIRDP-------LVHFVTRGWTDGFNPYPLFDDEFYLPQLPAL------DGLDPL 126
Query: 592 QHYITHGMKE 601
HY+ +G ++
Sbjct: 127 THYVANGWRQ 136
>gi|296283200|ref|ZP_06861198.1| VCBS [Citromicrobium bathyomarinum JL354]
Length = 1533
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 11/166 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G+++Y++ + Y GG D L N +L S S
Sbjct: 876 GGTGDDVYEVAGAGD----LLVEYAGGGTDTVLSRVSYTLGANIENLTLVSGS------G 925
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ A + + + G++ ++V+ G + +++ S GND DG +G DT + Y I
Sbjct: 926 AVEAAGNDLDNLLRGNAADNVIRGGAGDDILVGSGGNDAIDGGAGTDTAVFSGNRSDYTI 985
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ N + + D L VERL F D Y
Sbjct: 986 FNIANGQVQQISGPDGVDTLFSVERLAFDDGIYALGAQAGELQFRY 1031
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 32/78 (41%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E T + ++ G G D+++G++ + +G+DV + G D F +
Sbjct: 644 LAGDEGADTFYAGGGVANLTGRDGADMLVGSAYADRLDGGAGDDVIRTNGGADIVFGGSG 703
Query: 313 SYLYKIYRFENAIIVYDA 330
+ + I + D
Sbjct: 704 NDRFIIDSGSAPVDRPDI 721
Score = 42.0 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 24/73 (32%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +A ++ G + G ++ S+ D DG +G D + +
Sbjct: 642 LVLAGDEGADTFYAGGGVANLTGRDGADMLVGSAYADRLDGGAGDDVIRTNGGADIVFGG 701
Query: 320 RFENAIIVYDANE 332
+ I+ +
Sbjct: 702 SGNDRFIIDSGSA 714
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+++ G + + + + G +G+DV+ N ++ F SGND F SG
Sbjct: 657 GGVANLTGRDGADMLVGSAYADRLDGGAGDDVIRTNGGADIVFGGSGNDRFIIDSGS 713
>gi|73955222|ref|XP_854594.1| PREDICTED: similar to Macrophage metalloelastase precursor (HME)
(Matrix metalloproteinase-12) (MMP-12) (Macrophage
elastase) (ME) [Canis familiaris]
Length = 601
Score = 81.7 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 80/225 (35%), Gaps = 50/225 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + I Y+ + T D+ A WS V L F + S +DI
Sbjct: 241 WKKHLITYRINNYTPDMQPADVDY-------AIHKAFEVWSNVTPLKFRKVNSGEADIMI 293
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
+ ++ + +D R + +++FD+A++W KGT L A+HE+
Sbjct: 294 LFASRAHGDFSPFDGRGGVIAHAFGPGPQIGGDMHFDEAEIWTKTY-KGTNLFLVAVHEL 352
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y SY P + A D
Sbjct: 353 GHSLGLGHSSDPKAIMFPTY----------------SYVNPNTFHLSA----------DD 386
Query: 188 IVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
I +Q +YG P K +N E DS + G+ +
Sbjct: 387 IHGIQSLYGGPEKHQFSSNTDGTESANCDSNLSFDAVTTVGNKIF 431
>gi|26989281|ref|NP_744706.1| heme peroxidase [Pseudomonas putida KT2440]
gi|24984130|gb|AAN68170.1|AE016449_1 secreted hemolysin-type calcium-binding bacteriocin, putative
[Pseudomonas putida KT2440]
Length = 3619
Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 13/174 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYD-----SGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+ GN+ + + + D GGDD LD G N L ++
Sbjct: 3414 NGNAGNDT--LNGDAGNDQLFGGLGDDQLRGGGGDDSLD----AGGGNDTLLGEAGNDNL 3467
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + ++ +++ G GND + G+ + +GND +G++G DT A +
Sbjct: 3468 NGGAGDDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAGNDFLNGAAGNDTVVGGAGN 3527
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + A D + + + + Q + + + AS
Sbjct: 3528 D--TMIATDGNDVFQFAAGFGNDLIINFDAIAAGGQDRLDITALNITAATFGAS 3579
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 57/194 (29%), Gaps = 16/194 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIGGYEKNM 260
GN+ Y ++ G DL+ TL N +L + G +
Sbjct: 3336 GNDTYVVDDAGDVVVEAT----GAGTDLVRTTLASHTMAANVENLAYTGVGNFTGTGNGL 3391
Query: 261 T--IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK- 317
I +++ G GNDV+ GN+ N+ +GND G G D
Sbjct: 3392 ANIIDGGAGNDTLSGDGGNDVLNGNAGNDTLNGDAGNDQLFGGLGDDQLRGGGGDDSLDA 3451
Query: 318 -------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ N + A + D + + L+ D L A +
Sbjct: 3452 GGGNDTLLGEAGNDNLNGGAGDDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAGNDF 3511
Query: 371 LIQVIGQDVFESMK 384
L G D
Sbjct: 3512 LNGAAGNDTVVGGA 3525
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 22/154 (14%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDV 297
T + +++ G N I+ +++ G G+D + G N++ GND
Sbjct: 3180 TNAANTLTGTTGNDVISGLGGNDTLNGLGGSDQLFGGIGNDILNGGDDPDFLNGEDGNDT 3239
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRFA 347
+G G D A + + + + V +A D + +VE L +
Sbjct: 3240 LNGGLGADAMNGGAGNDTFLVDNAGD--TVTEALNGGTDQVQTSLASYTLGANVENLTYT 3297
Query: 348 DQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ L A + L G D
Sbjct: 3298 GSSAFTGTGNALANTLTGGAGNDLLNGGAGADRL 3331
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 41/108 (37%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I +++E ++ G N I + + G +G+D++ ++ GND
Sbjct: 2448 GTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGND 2507
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
V G +G++ + + I N+ ++ + +
Sbjct: 2508 VLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDM 2555
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 17/142 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG + + ++V G +GND + G N+ +G+D+ G D
Sbjct: 2446 LGGTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDG 2505
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + DF+ E D IL
Sbjct: 2506 ND----VLHGGNGVNLIIGGFGNDFIVTGE-----DASEAIGGQGNDFILG--------S 2548
Query: 373 QVIGQDVFESMKHFYEFGLSEG 394
+ QD+ + E G S+G
Sbjct: 2549 KANEQDMGNEGDDWIEKGTSDG 2570
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 48/142 (33%), Gaps = 5/142 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
E ++ + + ++ S G+D + G++ +++ +GND G +G D
Sbjct: 910 HYTGEDHVVLGGTAGNDIIISSEGDDTLYGDAGDDLLEGGAGNDAVLGGAGDDIITDSFG 969
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ N +IV + + + + F D ++ + +
Sbjct: 970 DNRLE-GNAGNDVIVAGSMGVAGNLILGGDGQDFIITTEDISTTFGGLGDDFILGAKTNL 1028
Query: 373 QVIGQDVFESMKHFYEFGLSEG 394
G + + E G +G
Sbjct: 1029 PPTGNEGD----DWIEKGTQDG 1046
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 51/156 (32%), Gaps = 6/156 (3%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T++ G+D + + L GG + I + +I G + N + + ++G
Sbjct: 2462 DTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGNDVLHGGNGVNLIIGG 2521
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND ++ + GND GS + + + A + +
Sbjct: 2522 FGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEKGTSDGAP-GDNFDPLG 2580
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
D + + ++ I+ + + D
Sbjct: 2581 NDPIIGNDVFVGGNENDKFNGEGGDDIMVGSLGFGD 2616
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSV 354
+ G+ DT Y S Y + N++ V D A D L+ +ERL+F+D S
Sbjct: 2792 ILSGTDHYDTAVYSGVSTDYSVVVDGNSVTVTDLVAGRDGVDHLTGIERLQFSDSSQASG 2851
Query: 355 NVKQRSILEYTA 366
+
Sbjct: 2852 VGTAVNAGPTGH 2863
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I +++E ++ G + + ++V+G +G+D++ + +N ++GND
Sbjct: 921 GTAGNDIIISSEGDDTLYGDAGDDLLEGGAGNDAVLGGAGDDIITDSFGDNRLEGNAGND 980
Query: 297 VFD----GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
V G +G + I + + DF+
Sbjct: 981 VIVAGSMGVAGN--LILGGDGQDFIITTEDISTTF---GGLGDDFILG 1023
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 17/140 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL----DLT-LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ I G+D + D + IGG N L +++ G E + I +
Sbjct: 2506 NDVLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEK 2565
Query: 265 HTVIESVVGSS----------GNDVVIGNSANNVFFESSGNDVFDGSSGL-DTFFYYAPS 313
T + G + GNDV +G + N+ F G+D+ GS G D + +
Sbjct: 2566 GTS-DGAPGDNFDPLGNDPIIGNDVFVGGNENDKFNGEGGDDIMVGSLGFGDRYIGGSGY 2624
Query: 314 YLYKIYRFENAIIVYDANEH 333
+ + ++
Sbjct: 2625 DWSTFKDLAQGVSIDMSDRF 2644
>gi|209525372|ref|ZP_03273913.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Arthrospira
maxima CS-328]
gi|209494223|gb|EDZ94537.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Arthrospira
maxima CS-328]
Length = 443
Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 26/161 (16%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GG+DL+ + I + I+ G + N TI + + G G+D++
Sbjct: 251 VFAGGGNDLVIGSEI---DDVIN----------GNQGNDTIYGGAGNDLIWGGQGDDLLF 297
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN N++ + GND G +G D F Y N I++ D D L
Sbjct: 298 GNDGNDIINGNRGNDTIYGGAGDD-FIRGGQGDDYLSGDAGNDILIGD---LGADTLVGG 353
Query: 342 E-----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
E L AD ID ++ IL++ + D I V+G
Sbjct: 354 EGADTFVLTHADATIDQADL----ILDFNLAEGDRIAVVGD 390
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 13/143 (9%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G ++ I + I+ V+ + GND + G + N++ + G+D+ G+ G D
Sbjct: 252 FAGGGNDLVI--GSEIDDVINGNQGNDTIYGGAGNDLIWGGQGDDLLFGNDGNDIINGNR 309
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + A + D+LS + L +
Sbjct: 310 GND----TIYGGAGDDFIRGGQGDDYLSG------DAGNDILIGDLGADTLVGGEGADTF 359
Query: 372 IQVIGQDVFESMKHFYEFGLSEG 394
+ + +F L+EG
Sbjct: 360 VLTHADATIDQADLILDFNLAEG 382
>gi|166367965|ref|YP_001660238.1| hypothetical protein MAE_52240 [Microcystis aeruginosa NIES-843]
gi|166090338|dbj|BAG05046.1| probable Chi protein [Microcystis aeruginosa NIES-843]
Length = 910
Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G N+ Y + D+ G D L+ ++L + + ++
Sbjct: 676 GGADNDTYLFNTDLVLGS--DLLIDALGTDTLNFAATTTKTINLNLGSTAAQTVTAGNLT 733
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+T+A+ T E+V+G S ND ++GNS N +GND G G D
Sbjct: 734 LTLARATAFENVIGGSLNDTILGNSLVNSLTGGAGNDSLTGGLGKDILTGS--------- 784
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + + N + L+ + ++ + S++
Sbjct: 785 ---DGLDTLNYNSLGESLLTGFDVIQGYNGTGASLDSINAPA 823
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 50/187 (26%), Gaps = 17/187 (9%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV----WRYGIGKGTILSHNALH 126
+T+ + S+ + Y N++ + + H
Sbjct: 269 TDTAWGVRVAIGGSSYDWFGAGAGGVAYVGSFNWNSDTPTFVFSTQTLSDEKYTAEAISH 328
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH LGL H G Y ++ +M Q+ + Y A
Sbjct: 329 EVGHTLGLKHDGRTTPSEAYYLGHG--AGETGWAPIMGAGYYQNLTQWSKGQYLAANNTE 386
Query: 187 D---IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG----DDLLDLTLIGGV 239
D I+ Q +G GN + T S G + +D
Sbjct: 387 DDLAIITTQNGFGYRVDDKGNTL----ATASTLTVFGTAVSSSGIIERNTDVDFFSFTTA 442
Query: 240 KNYIDLN 246
I L
Sbjct: 443 AGPISLT 449
>gi|303245322|ref|ZP_07331606.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
fructosovorans JJ]
gi|302493171|gb|EFL53033.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
fructosovorans JJ]
Length = 696
Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 12/178 (6%)
Query: 194 IYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+YGA +Y P + D G D ++ + + + L + S
Sbjct: 511 LYGAAATDDTRYVYTNEYGTYAAQDPSRTLLVDLTGTDTINASPVTAGSA-VTLAPGTVS 569
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + +A T IE++ GND+++ N A+N + G+DV G D+
Sbjct: 570 LIDGAA--VVLAPLTTIENLATGDGNDLLVDNDADNSLYGGRGDDVLMTGRGDDSLDGGP 627
Query: 312 PSYLYKI-------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + ++ +++ +++VE L FAD+ + + + R+ L
Sbjct: 628 GFDVVGFPNIYADYTIGTDTGVLTVSSQAGVKTIANVEALSFADRVVPATDALTRTDL 685
>gi|300864203|ref|ZP_07109087.1| hypothetical protein OSCI_740004 [Oscillatoria sp. PCC 6506]
gi|300337777|emb|CBN54233.1| hypothetical protein OSCI_740004 [Oscillatoria sp. PCC 6506]
Length = 541
Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 22/191 (11%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
Y + TI GG+D+L +G N + ++ ++ G + N T+
Sbjct: 63 TYYGMAGND-------TIIGLGGNDIL----LGNAGNDLLCGNQASDTLSGGQNNDTLIG 111
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G GND+++G+ +++ +GND G G D F + I FEN
Sbjct: 112 GKASDILNGDIGNDILLGDLGDDILTGGAGNDTLTGGDGSDIFVIAKSEGIDLITDFENG 171
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ DF+ L F D I + N Q + + A+ + +
Sbjct: 172 V----------DFIQLNPSLTFNDLAITTTNSGQVLVTDKIANQSLFVISGIAASDLTAA 221
Query: 385 HFYEFGLSEGR 395
F G SEG
Sbjct: 222 DFIT-GTSEGT 231
>gi|119580008|gb|EAW59604.1| matrix metallopeptidase 11 (stromelysin 3), isoform CRA_b [Homo
sapiens]
gi|193786817|dbj|BAG52140.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 61/173 (35%), Gaps = 45/173 (26%)
Query: 52 QEVARW----ALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFM------ 100
QE R AL WS V LTF E +DI + + +D +
Sbjct: 107 QEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFF 166
Query: 101 -------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+++FD + W G +GT L A HE GH LGL H
Sbjct: 167 PKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHT---------------- 210
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ ++MS F +F Y + D VQ +YG P ++ +
Sbjct: 211 ---TAAKALMSAF--------YTFRYPLSLSPDDCRGVQHLYGQPWPTVTSRT 252
>gi|115496089|ref|NP_001069451.1| matrix metalloproteinase-19 [Bos taurus]
gi|115305300|gb|AAI23723.1| Matrix metallopeptidase 19 [Bos taurus]
gi|296487677|gb|DAA29790.1| matrix metalloproteinase 19 [Bos taurus]
Length = 499
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 62/188 (32%), Gaps = 45/188 (23%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
+W + ++ L + S A+ A WS V LTF E +DI
Sbjct: 103 GHWRKKHLTFRILNLPSTLPSST-------ARAALLQAFQYWSNVAPLTFREVKAGWADI 155
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + C+ +D ++FD+ ++W G +G L A HEI
Sbjct: 156 RLSFHGRHSLYCSNSFDGPGRVLAHADIPELGSVHFDEDELWTEGTYRGVNLRIIAAHEI 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H Y + + A + D+
Sbjct: 216 GHALGLGHSR--------------------------YTQALMAPVYAGYRPYFKLHPDDV 249
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 250 AGIQALYG 257
>gi|146271904|emb|CAL29436.2| interstitial collagenase [Galleria mellonella]
Length = 333
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 71/208 (34%), Gaps = 49/208 (23%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+ R + L+ W + Y+ + D+ E+A+ A WS D
Sbjct: 14 FGESRAKRYALQGSRWRIKNLTYRIAKYPSRLNQADVDL------ELAK-AFSVWSDYTD 66
Query: 68 LTFEET---SIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIG 115
LTF + +H +++F + +G Y Y + +FD A+ W
Sbjct: 67 LTFTQKRSGQVHIEVRFETGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAETWTINSR 126
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMM 173
+GT L A HE GH+LGL H + + G D ++ D
Sbjct: 127 RGTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYDPAFQLDQ---------------- 170
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q +YG +
Sbjct: 171 ------------DDIQGIQALYGRKTQT 186
>gi|294085806|ref|YP_003552566.1| metalloprotease [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665381|gb|ADE40482.1| metalloprotease, putative [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 971
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 21/184 (11%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEETSIHSD----- 78
+ PD + AR L E+ + ++ F E +
Sbjct: 478 VARSPDANGNWGYLSGYFIRTQEQIDQARRYIKAVLAEFERAANVRFVEVEHSQNNRGDV 537
Query: 79 -IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-TILSHNALHEIGHALGLMH 136
I ++ YV P + V + K T +HEIGH +GL H
Sbjct: 538 PIIYLFLPTDYVHIPGTPGAWAGYPGASARFVQHFDPSKPYTHYRGEPVHEIGHMMGLRH 597
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
P NG E +S +++MSY P+ + + + +DI +Q +YG
Sbjct: 598 PFDSNGQRQT-SWPARPELESDFSTIMSY-SPKTNWVGLT--------PADIAVLQFLYG 647
Query: 197 APKG 200
AP+G
Sbjct: 648 APQG 651
>gi|218528821|ref|YP_002419637.1| hypothetical protein Mchl_0790 [Methylobacterium chloromethanicum
CM4]
gi|218521124|gb|ACK81709.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 294
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 57/183 (31%), Gaps = 26/183 (14%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR 419
L A Y + + + + H+ FG R+ FD+ Y R G R
Sbjct: 28 LFDAAYYRERNPGVARSGLDPFLHYAWFGARRDRNPNADFDTAFY-------RRQSGRTR 80
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
RHY G +G +P F Y+A + D++ A + HF G EG
Sbjct: 81 LDPLRHYGQVGAAQGLDPSPGFSTSLYLARYPDVVAAGVNP-------LQHFRTDGRAEG 133
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-GRNPDAFKALEYIASHEDLI 537
R D G A H +T E GR + + D
Sbjct: 134 REAAPSPIE-----PDRLRALD---GVAENHRLTLPEAEGGRFALTLRRDSPLDRTADFA 185
Query: 538 NAF 540
F
Sbjct: 186 PRF 188
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 50/155 (32%), Gaps = 22/155 (14%)
Query: 478 GRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
GR FD+ Y + G D HY G + RNP+A F Y
Sbjct: 23 GRVPKLFDAAYYRERNPGVARS-GLD---PFLHYAWFGARRDRNPNADFDTAFYRRQSG- 77
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
D H+ G +G S F+ LYL Y D+ QH
Sbjct: 78 --RTRLDP-------LRHYGQVGAAQGLDPSPGFSTSLYLARYPDVVAA----GVNPLQH 124
Query: 594 YITHGMKEGRALGISGMQFKSVMNLSEKSRDKADL 628
+ T G EGR S ++ + L + +
Sbjct: 125 FRTDGRAEGREAAPSPIEPDRLRALDGVAENHRLT 159
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 46/137 (33%), Gaps = 20/137 (14%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR P F A Y + + + D H++ FG R D
Sbjct: 23 GRVPKLFDAAYYRERNPGVARSGLDP-------FLHYAWFGARRDRNPNADFDTAF---- 71
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
R G R RHY G +G +P F Y+A + D++ A +
Sbjct: 72 -YRRQSGRTRLDPLRHYGQVGAAQGLDPSPGFSTSLYLARYPDVVAAGVNP-------LQ 123
Query: 553 HFSNFGYEEGRSITFNP 569
HF G EGR +P
Sbjct: 124 HFRTDGRAEGREAAPSP 140
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 11/100 (11%)
Query: 301 SSGLDTF----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
SGLD F ++ A F+ A + + D L
Sbjct: 43 RSGLDPFLHYAWFGARRDRNPNADFDTAFYRRQSGRTRLDPLR---HYGQVGAAQGLDPS 99
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
S Y A Y D++ ++HF G +EGR+
Sbjct: 100 PGFSTSLYLARYPDVVAA----GVNPLQHFRTDGRAEGRE 135
>gi|332265538|ref|XP_003281776.1| PREDICTED: stromelysin-3 isoform 2 [Nomascus leucogenys]
Length = 354
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 61/173 (35%), Gaps = 45/173 (26%)
Query: 52 QEVARW----ALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM------ 100
QE R AL WS V LTF E +DI + + +D +
Sbjct: 107 QEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFF 166
Query: 101 -------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+++FD + W G +GT L A HE GH LGL H
Sbjct: 167 PKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHT---------------- 210
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ ++MS F +F Y + D +Q +YG P ++ +
Sbjct: 211 ---TAAKALMSAF--------YTFRYPLSLSPDDHRGIQHLYGQPWPTVTSRT 252
>gi|6981214|ref|NP_036996.1| matrilysin precursor [Rattus norvegicus]
gi|1705982|sp|P50280|MMP7_RAT RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|402493|gb|AAA99432.1| matrilysin [Rattus norvegicus]
gi|40555747|gb|AAH64657.1| Matrix metallopeptidase 7 [Rattus norvegicus]
gi|149020720|gb|EDL78525.1| matrix metallopeptidase 7 [Rattus norvegicus]
Length = 267
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 69/211 (32%), Gaps = 48/211 (22%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A+ L W + + Y+ TT F + ++ + AL W
Sbjct: 87 KPRCGVPDVAEFSLMPNSPKWHSRTVTYRIVSYTTDLPRFLV-------DQIVKRALRMW 139
Query: 63 SKVVDLTFEETS-IHSDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKAD 108
S + L F+ S +DI N + F + +FDK +
Sbjct: 140 SMQIPLNFKRVSWGTADIIIGFARGDHGDNFPFDGPGNTLGHAFAPGPGLGGDAHFDKDE 199
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W G G A HE+GH+LGL H SV S M
Sbjct: 200 YWTDGEDSGVNFLFVATHELGHSLGLGHS-----------------------SVPSSVMY 236
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
D S + T DI +QK+YG
Sbjct: 237 PTYQGDHSEDFSLT--KDDIAGIQKLYGKRN 265
>gi|86747931|ref|YP_484427.1| glycerophosphoryl diester phosphodiesterase [Rhodopseudomonas
palustris HaA2]
gi|86570959|gb|ABD05516.1| Glycerophosphoryl diester phosphodiesterase [Rhodopseudomonas
palustris HaA2]
Length = 1236
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 7/165 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI G D LDL+ G ++L + + S G + + IES V SGNDV
Sbjct: 989 DTIDGGAGFDTLDLSEATGA-VTLNLVSGTVSGAGIGTDHFS-----SIESFVFGSGNDV 1042
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + ++ +GND DG +G DT + N I+ S
Sbjct: 1043 ITGGNGDDSLDGGAGNDAIDGGNGNDTLSGGEGNDAID-GGSGNDIVDGGLGNDTLKGGS 1101
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D + I+ A + L G D+
Sbjct: 1102 GNDVIAAGDGDDNVDAGSGDDIVTGGAGNDTLKGGSGADIITGGA 1146
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 13/170 (7%)
Query: 202 LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS- 252
GN++ + I G+D L + + GG N D+ +
Sbjct: 1038 SGNDVITGGNGDDSLDGGAGNDAIDGGNGNDTLSGGEGNDAIDGGSGN--DIVDGGLGND 1095
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N IA ++V SG+D+V G + N+ SG D+ G +G D +
Sbjct: 1096 TLKGGSGNDVIAAGDGDDNVDAGSGDDIVTGGAGNDTLKGGSGADIITGGAGNDILTGGS 1155
Query: 312 PSYLYKIYR-FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ ++ F N + A L FAD + Q
Sbjct: 1156 GADVFVFAAGFGNDTVTDFATTGSSADLLQFSSDMFADFADVMAHTAQVG 1205
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 59/210 (28%), Gaps = 23/210 (10%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
TP I++ G + + Y D + G+D L
Sbjct: 879 SGTPGDDVIISTSGDDVIDGGDGVDTVSYAASAAGVDVDLAAGVASGDGNDTLS------ 932
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
S S+ G + ++ + + G G+D++ G N+V GND+
Sbjct: 933 ----------SIESVIGSAHDDRLSGNDAANLLDGGDGDDILSGGLGNDVLNGGLGNDII 982
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAII------VYDANEHKQDFLSDVERLRFADQCID 352
G +G DT A + A+ D S +E F
Sbjct: 983 TGGAGDDTIDGGAGFDTLDLSEATGAVTLNLVSGTVSGAGIGTDHFSSIESFVFGSGNDV 1042
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L+ A + + G D
Sbjct: 1043 ITGGNGDDSLDGGAGNDAIDGGNGNDTLSG 1072
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 1/129 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N + + V +G+D+V G+ ++ F +GND+ G SG D A
Sbjct: 244 GASGTAGNDVVYAMQGDDIVWSGAGDDLVYGDGGDDALFGGAGNDILVGGSGTDLLSGDA 303
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ N +++ + S ++ + + DL
Sbjct: 304 GRDVLD-GGAGNDVVLASGDTVLFRRGSGIDLVALDAASSIDFQDIDSRAITVIRDGADL 362
Query: 372 IQVIGQDVF 380
I IG D
Sbjct: 363 IVRIGDDAL 371
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 54/140 (38%), Gaps = 1/140 (0%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D+ L +G ++D + +SI + I+ G++GNDVV ++
Sbjct: 202 SDIQSLIDMGVDAVFVDDTRLARASIEAIAGANVVYGTPEIDGASGTAGNDVVYAMQGDD 261
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ + +G+D+ G G D F A + + + ++ DA D + + + +
Sbjct: 262 IVWSGAGDDLVYGDGGDDALFGGAGNDIL-VGGSGTDLLSGDAGRDVLDGGAGNDVVLAS 320
Query: 348 DQCIDSVNVKQRSILEYTAS 367
+ ++ A+
Sbjct: 321 GDTVLFRRGSGIDLVALDAA 340
Score = 38.6 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 61/182 (33%), Gaps = 13/182 (7%)
Query: 204 NNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
N +Y S +Y GDD++ + G Y D ++ G N
Sbjct: 234 NVVYGTPEIDGASGTAGNDVVYAMQGDDIV-WSGAGDDLVYGD---GGDDALFGGAGNDI 289
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + + G +G DV+ G + N+V S +F SG+D A S +
Sbjct: 290 LVGGSGTDLLSGDAGRDVLDGGAGNDVVLASGDTVLFRRGSGIDLVALDAASSI-DFQDI 348
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ I D + + D + + L S+ D + + ++
Sbjct: 349 DSRAIT--VIRDGADLIVRI----GDDALVIRNGAGNAASLPGAVSFADGVTLTATELLA 402
Query: 382 SM 383
Sbjct: 403 RA 404
>gi|240137335|ref|YP_002961804.1| hypothetical protein MexAM1_META1p0597 [Methylobacterium extorquens
AM1]
gi|240007301|gb|ACS38527.1| hypothetical protein MexAM1_META1p0597 [Methylobacterium extorquens
AM1]
Length = 294
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 52/160 (32%), Gaps = 25/160 (15%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR 419
L A Y + + + + H+ FG R+ FD+ Y R G R
Sbjct: 28 LFDAAYYRERNPGVARSGLDPFLHYAWFGARRDRNPNADFDTAFY-------RRQSGRTR 80
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
RHY G +G +P F Y+A + D++ A + HF G EG
Sbjct: 81 LDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVNP-------LQHFRTDGRAEG 133
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
R D G A H +T EG
Sbjct: 134 REAAPSPIE-----PDRLRALD---GVAEDHRLTLPEAEG 165
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 50/155 (32%), Gaps = 22/155 (14%)
Query: 478 GRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
GR FD+ Y + G D HY G + RNP+A F Y
Sbjct: 23 GRVPKLFDAAYYRERNPGVARS-GLD---PFLHYAWFGARRDRNPNADFDTAFYRRQSG- 77
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
D H+ G +G S F+ LYL Y D+ QH
Sbjct: 78 --RTRLDP-------LRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAA----GVNPLQH 124
Query: 594 YITHGMKEGRALGISGMQFKSVMNLSEKSRDKADL 628
+ T G EGR S ++ + L + D
Sbjct: 125 FRTDGRAEGREAAPSPIEPDRLRALDGVAEDHRLT 159
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 46/137 (33%), Gaps = 20/137 (14%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR P F A Y + + + D H++ FG R D
Sbjct: 23 GRVPKLFDAAYYRERNPGVARSGLDP-------FLHYAWFGARRDRNPNADFDTAF---- 71
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
R G R RHY G +G +P F Y+A + D++ A +
Sbjct: 72 -YRRQSGRTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVNP-------LQ 123
Query: 553 HFSNFGYEEGRSITFNP 569
HF G EGR +P
Sbjct: 124 HFRTDGRAEGREAAPSP 140
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 11/100 (11%)
Query: 301 SSGLDTF----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
SGLD F ++ A F+ A + + D L
Sbjct: 43 RSGLDPFLHYAWFGARRDRNPNADFDTAFYRRQSGRTRLDPLR---HYGQIGAAQGLDPS 99
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
S Y A Y D++ ++HF G +EGR+
Sbjct: 100 PGFSTSLYLARYPDVVAA----GVNPLQHFRTDGRAEGRE 135
>gi|47220689|emb|CAG11758.1| unnamed protein product [Tetraodon nigroviridis]
Length = 439
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 65/196 (33%), Gaps = 44/196 (22%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W + Y+ + DI R A WS V DLTF E +DI
Sbjct: 76 GRWRKKSLTYRIYNYSPDMRRADIG-------AAVRAAFRYWSDVADLTFREIPYGRADI 128
Query: 80 KFIS---------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ G+V + ++FD ++W G +GT L A HEIGH
Sbjct: 129 RLAFHKRDGFCPFDGRGHVLAHAEPPESGV-VHFDDDELWTEGSYRGTNLRIVAAHEIGH 187
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
ALGL H S +S + + ++ + DI
Sbjct: 188 ALGLGH--------------------SQFSSALMAAVYTGYRVNFKLHW------DDIRG 221
Query: 191 VQKIYGAPKGSLGNNI 206
+Q +YG S +
Sbjct: 222 IQALYGKRATSSVDAT 237
>gi|4505213|ref|NP_002420.1| matrix metalloproteinase-19 isoform rasi-1 preproprotein [Homo
sapiens]
gi|12643345|sp|Q99542|MMP19_HUMAN RecName: Full=Matrix metalloproteinase-19; Short=MMP-19; AltName:
Full=Matrix metalloproteinase RASI; AltName: Full=Matrix
metalloproteinase-18; Short=MMP-18; Flags: Precursor
gi|1731986|emb|CAA63299.1| MMP-19 (matrix metalloproteinase) [Homo sapiens]
gi|2228244|gb|AAB63008.1| matrix metalloproteinase RASI-1 [Homo sapiens]
gi|2253587|gb|AAC51521.1| matrix metalloproteinase RASI-1 [Homo sapiens]
gi|29791916|gb|AAH50368.1| Matrix metallopeptidase 19 [Homo sapiens]
gi|51234137|gb|AAT97983.1| matrix metalloproteinase 19 [Homo sapiens]
gi|312153168|gb|ADQ33096.1| matrix metallopeptidase 19 [synthetic construct]
Length = 508
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 27/152 (17%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + ++ L + A+ R A +WS V LTF+E + +DI
Sbjct: 102 GRWRKKHLTFRILNLPSTLPPHT-------ARAALRQAFQDWSNVAPLTFQEVQAGAADI 154
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ + W G +G L A HE+
Sbjct: 155 RLSFHGRQSSYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEV 214
Query: 129 GHALGLMH--------PGSYNGGYPVYGVDND 152
GHALGL H Y G P + + D
Sbjct: 215 GHALGLGHSRYSQALMAPVYEGYRPHFKLHPD 246
>gi|78189655|ref|YP_379993.1| hypothetical protein Cag_1699 [Chlorobium chlorochromatii CaD3]
gi|78171854|gb|ABB28950.1| hypothetical protein Cag_1699 [Chlorobium chlorochromatii CaD3]
Length = 593
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N + T + + G GND + G +++ SG+DV DG SG+D ++ S Y
Sbjct: 489 EGNQEMWGGTGDDLLWGGVGNDNLYGGIDDDLLCGGSGDDVLDGGSGIDAAYFSGKSEEY 548
Query: 317 KI----YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+I ++ A D L ++E+LRFAD+ + +
Sbjct: 549 RITHHPTTSMTTVVDLVAERDGTDNLFNIEQLRFADRTMFLGD 591
>gi|7341370|gb|AAF61270.1|AF244994_1 membrane type-3 matrix metalloproteinase [Scyliorhinus torazame]
Length = 613
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 58/206 (28%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y T R A W V LTFEE
Sbjct: 124 YALTGQKWHHKHITYSIKNFTPKVGKL-------ETHRAIRRAFDVWQNVTPLTFEEIPY 176
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 177 VELENKKRDVDITIMFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 236
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A HE+GHALGL H + + Y ++
Sbjct: 237 PNHDGNDLFLVAAHELGHALGLEHSNDPSAIMAPFYQ---------------YMDTENFQ 281
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 282 LPQ----------DDLQGIQKIYGPP 297
>gi|297706970|ref|XP_002830281.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-24-like
[Pongo abelii]
Length = 566
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R W KV LTFEE
Sbjct: 77 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRRLFDVWQKVTPLTFEEVPY 129
Query: 76 H--------------------SDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 130 HEIKSDRKEADIMSFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 189
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 190 ANHDGNDLFLVAVHELGHALGLEHSSDPSA-------------------IMAPFYQYMET 230
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 231 HNFKL-----PQ-DDLQGIQKIYGPP 250
>gi|1702930|emb|CAA69913.1| matrix metalloproteinase [Homo sapiens]
Length = 508
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 27/152 (17%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + ++ L + A+ R A +WS V LTF+E + +DI
Sbjct: 102 GRWRKKHLTFRILNLPSTLPPHT-------ARAALRQAFQDWSNVAPLTFQEVQAGAADI 154
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ + W G +G L A HE+
Sbjct: 155 RLSFHGRQSSYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEV 214
Query: 129 GHALGLMH--------PGSYNGGYPVYGVDND 152
GHALGL H Y G P + + D
Sbjct: 215 GHALGLGHSRYSQALMAPVYEGYRPHFKLHPD 246
>gi|146386384|gb|ABQ23980.1| membrane-type 5 matrix metalloproteinase [Oryctolagus cuniculus]
Length = 198
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 9 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 61
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 62 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 121
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 122 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 162
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ P D+ +QKIYG P
Sbjct: 163 HNFKL-----PQ-DDLQGIQKIYGPP 182
>gi|332206790|ref|XP_003252478.1| PREDICTED: matrix metalloproteinase-19 [Nomascus leucogenys]
Length = 503
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 61/188 (32%), Gaps = 45/188 (23%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + ++ L + S A+ R A +WS V LTF E + +DI
Sbjct: 102 GRWRKKHLTFRILNLPSTLPSHT-------ARTALRQAFEDWSNVAPLTFREVQAGTADI 154
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ + W G +G L A HE+
Sbjct: 155 RLSFHGRQSSYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEV 214
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H Y + + + D+
Sbjct: 215 GHALGLGHSR--------------------------YSQALMAPVYQGYRPHFKLHPDDV 248
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 249 AGIQALYG 256
>gi|296535884|ref|ZP_06898041.1| hemolysin-type calcium-binding region [Roseomonas cervicalis ATCC
49957]
gi|296263791|gb|EFH10259.1| hemolysin-type calcium-binding region [Roseomonas cervicalis ATCC
49957]
Length = 340
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 51/141 (36%), Gaps = 22/141 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FDS YL + D+ HY G EGRNP+A F Y D+ A
Sbjct: 8 FDSAYYLATNGDV--AASGWATDPGGHYERFGRYEGRNPNAYFDEGFYRRFQLDVAEAIG 65
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT----------------FDSYLYLGSYDDLRNVFGS 501
D G DH+ +G E R ++ Y + D+ + +
Sbjct: 66 DG--RFASGYDHWIGYGQFEERSPRQVYGTQNTYFPSELGFTNAGGYFAANADVLDAYLR 123
Query: 502 DR-GAAARHYITHGVKEGRNP 521
+A +HY+ +G EGR
Sbjct: 124 GEVRSAWQHYVEYGHDEGRQS 144
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 55/140 (39%), Gaps = 24/140 (17%)
Query: 483 FDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FDS YL + D+ +D G HY G EGRNP+A F Y D+ A
Sbjct: 8 FDSAYYLATNGDVAASGWATDPGG---HYERFGRYEGRNPNAYFDEGFYRRFQLDVAEAI 64
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT----------------FNPDLYLTSYDDLWNVFG 584
D +G DH+ +G E RS N Y + D+ + +
Sbjct: 65 GDG--RFASGYDHWIGYGQFEERSPRQVYGTQNTYFPSELGFTNAGGYFAANADVLDAYL 122
Query: 585 SDRS-AAAQHYITHGMKEGR 603
+A QHY+ +G EGR
Sbjct: 123 RGEVRSAWQHYVEYGHDEGR 142
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 22/143 (15%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
+ Y A+ D+ + H+ FG EGR+ FD Y D+
Sbjct: 4 ALDFFDSAYYLATNGDVAAS--GWATDPGGHYERFGRYEGRNPNAYFDEGFYRRFQLDVA 61
Query: 413 NVFGSDR-GAAARHYITHGVKEGRNP-------DAFKALE--------YIASHEDLINAF 456
G R + H+I +G E R+P + + E Y A++ D+++A+
Sbjct: 62 EAIGDGRFASGYDHWIGYGQFEERSPRQVYGTQNTYFPSELGFTNAGGYFAANADVLDAY 121
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR 479
V+ H+ +G +EGR
Sbjct: 122 LRGE--VRSAWQHYVEYGHDEGR 142
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D F + Y+A++ D+ + H+ FG EGR+ F+ Y D+
Sbjct: 6 DFFDSAYYLATNGDVAASG-----WATDPGGHYERFGRYEGRNPNAYFDEGFYRRFQLDV 60
Query: 580 WNVFGSDRSA-AAQHYITHGMKEGRA 604
G R A H+I +G E R+
Sbjct: 61 AEAIGDGRFASGYDHWIGYGQFEERS 86
>gi|262275450|ref|ZP_06053260.1| putative biofilm-associated surface protein [Grimontia hollisae CIP
101886]
gi|262220695|gb|EEY72010.1| putative biofilm-associated surface protein [Grimontia hollisae CIP
101886]
Length = 1723
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 75/196 (38%), Gaps = 23/196 (11%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDS-------PFIQTIYDSGGDDL-LDLTLIGGVKNYIDLN 246
YG+ GN Y ++ + + + T+ + G +++T+ G +
Sbjct: 1467 YGSLNLVNGNWTYTLDPRSTPALGDNDTLTEVITLTATNGAQTQINVTIGGSESAITNAM 1526
Query: 247 TESWS------------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
S + G + N IA I+ ++G++G+DV+ GN+ +++ G
Sbjct: 1527 PGGVSHSLSDVIALDDITFSGNDGNDRIAGSNDIDILLGNAGHDVIHGNAGDDIIDGGLG 1586
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D+ G G D A S Y + + + +H DF + + + +D
Sbjct: 1587 DDLLVGGQGNDLLAGGAGSDTYAFLQGDQGTVNKPTVDHIIDFNTQQDAINLSD---LLN 1643
Query: 355 NVKQRSILEYTASYED 370
N + Y + +D
Sbjct: 1644 NETSDPLEGYLSMVDD 1659
>gi|254425996|ref|ZP_05039713.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196188419|gb|EDX83384.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 2317
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 13/182 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G+D L +L+G N I + ++ G + N T++
Sbjct: 2068 NDTLDGGKGNDTLDGGRGNDTLTGGSGRDSLLGNDGNDILDGEANNDALFGGKGNDTLSG 2127
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LY 316
++++ G GND++ G + N+ G D G G DT + +
Sbjct: 2128 GRGVDTLNGGDGNDILNGGADNDTLDGGRGVDTLFGGKGNDTLYGGRGNDALFGDDGNDT 2187
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
R +N + D + L + IL+ A + L G
Sbjct: 2188 LFGRADNDTLNGGDGNDTLDGGRGNDLLTGGSGRDILLGNDGNDILDGGADNDMLSGGQG 2247
Query: 377 QD 378
+D
Sbjct: 2248 RD 2249
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 61/177 (34%), Gaps = 9/177 (5%)
Query: 199 KGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G GN+I + T++ G+D L + L G N
Sbjct: 2135 NGGDGNDILNGGADNDTLDGGRGVDTLFGGKGNDTLYGGRGNDALFGDDGNDTLFGRADN 2194
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + N T+ + + G SG D+++GN N++ + ND+ G G DTF
Sbjct: 2195 DTLNGGDGNDTLDGGRGNDLLTGGSGRDILLGNDGNDILDGGADNDMLSGGQGRDTFVLS 2254
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTA 366
+ I F+ ++ A LS V + D + +
Sbjct: 2255 LGDGVDTIIDFDTKDLIGLAGGLTIGDLSFVGNNIIATDTSEVLATLTSVDTTSLNS 2311
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 67/190 (35%), Gaps = 22/190 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYE 257
G+ G ++ I KD I GG+D L G L+ + S + G +
Sbjct: 1991 SGTRGPDV--ISGTNKDDK----IDGLGGNDQL-----SGNDGNDSLDGGANSDTLYGGK 2039
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + ++++ G GND++ G + N+ GND DG G DT +
Sbjct: 2040 GNDMLDGDRGVDTLFGGDGNDILNGGADNDTLDGGKGNDTLDGGRGNDTLTGGSGRDSL- 2098
Query: 318 IYRFENAIIVYDANEH------KQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASY 368
+ N I+ +AN D LS V+ L D L+
Sbjct: 2099 LGNDGNDILDGEANNDALFGGKGNDTLSGGRGVDTLNGGDGNDILNGGADNDTLDGGRGV 2158
Query: 369 EDLIQVIGQD 378
+ L G D
Sbjct: 2159 DTLFGGKGND 2168
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 40/145 (27%), Gaps = 3/145 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N ++ + +S+ G + +D + G N++ G D G G D A
Sbjct: 2008 IDGLGGNDQLSGNDGNDSLDGGANSDTLYGGKGNDMLDGDRGVDTLFGGDGNDILNGGAD 2067
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + + N+ S + L D L + L
Sbjct: 2068 NDTLDGGKGNDTLDGGRGNDTLTGG-SGRDSLLGNDGNDILDGEANNDALFGGKGNDTLS 2126
Query: 373 QVIGQDVFES--MKHFYEFGLSEGR 395
G D G
Sbjct: 2127 GGRGVDTLNGGDGNDILNGGADNDT 2151
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G ++ VI+ G G+D+++G+S ++V G++ DG G D S
Sbjct: 1713 GSPSSDLPFVGGDVID---GGKGDDLLLGSSGDDVLLPGFGDNAVDGGEGTDVGVSNGVS 1769
Query: 314 YLYKI-YRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRS 360
+ I R + +++V D K L +VER +F DQ + ++ +
Sbjct: 1770 NDFSIRRRLDGSVVVVDVRSQKSLTLYQNVERFKFDDQMLTLDDIAEPP 1818
Score = 44.7 bits (104), Expect = 0.049, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 37/124 (29%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + GS G+D V G + N+V G+D G G D + N I
Sbjct: 1652 EIIEGSRGSDQVYGGAGNDVLIGLQGSDYIVGQQGRDIILGKGGDDILVGEDLFNPIEAP 1711
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D + + + + +L + G DV S +
Sbjct: 1712 DGSPSSDLPFVGGDVIDGGKGDDLLLGSSGDDVLLPGFGDNAVDGGEGTDVGVSNGVSND 1771
Query: 389 FGLS 392
F +
Sbjct: 1772 FSIR 1775
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E V+G+ G++++ G+ ++ + +GNDV G G D +
Sbjct: 1643 EVVLGTDGDEIIEGSRGSDQVYGGAGNDVLIGLQGSDYIVGQQGRDI 1689
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + + I + V G +GNDV+IG ++ G D+ G G D
Sbjct: 1647 GTDGDEIIEGSRGSDQVYGGAGNDVLIGLQGSDYIVGQQGRDIILGKGGDDILVGE 1702
>gi|297692149|ref|XP_002823430.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-19-like
[Pongo abelii]
Length = 507
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 27/152 (17%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + ++ L + A+ R A +WS V LTF E + +DI
Sbjct: 102 GRWRKKHLTFRILNLPSTLPPHT-------ARAALRQAFQDWSNVAPLTFREVQAGAADI 154
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ + W G G L A HE+
Sbjct: 155 RLSFHGRQSSYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYHGVNLRIIAAHEV 214
Query: 129 GHALGLMH--------PGSYNGGYPVYGVDND 152
GHALGL H Y G P + + D
Sbjct: 215 GHALGLGHSRYSQALMAPVYEGYRPHFKLHPD 246
>gi|74196364|dbj|BAE33072.1| unnamed protein product [Mus musculus]
Length = 473
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 64/192 (33%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + YF P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYFNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|317419770|emb|CBN81806.1| Matrix metalloproteinase-16 [Dicentrarchus labrax]
Length = 591
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 62/206 (30%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + + R A W V L FE
Sbjct: 102 YALTGQKWQHKHITYSIKNVTPKVGA-------EETHDAIRRAFDVWQNVTPLRFEAVPY 154
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 155 SELERTKKDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 214
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 215 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMDT 255
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ PM D++ +QKIYG P
Sbjct: 256 DNFKL-----PM-DDLLGIQKIYGPP 275
>gi|254559514|ref|YP_003066609.1| hypothetical protein METDI0968 [Methylobacterium extorquens DM4]
gi|254266792|emb|CAX22591.1| hypothetical protein METDI0968 [Methylobacterium extorquens DM4]
Length = 294
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 51/160 (31%), Gaps = 25/160 (15%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR 419
L A Y + + + H+ FG R+ FD+ Y R G R
Sbjct: 28 LFDAAYYRERNPGAARSGLDPFLHYAWFGARRDRNPNADFDTAFY-------RRQSGRTR 80
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
RHY G +G +P F Y+A + D++ A + HF G EG
Sbjct: 81 LDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVNP-------LQHFRTDGRAEG 133
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
R D G A H +T EG
Sbjct: 134 REAAPSPIE-----PDRLRALD---GVAEDHRLTLPEAEG 165
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 49/155 (31%), Gaps = 22/155 (14%)
Query: 478 GRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
GR FD+ Y G D HY G + RNP+A F Y
Sbjct: 23 GRVPKLFDAAYYRERNPGAARS-GLD---PFLHYAWFGARRDRNPNADFDTAFYRRQSG- 77
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
D H+ G +G S F+ LYL Y D+ QH
Sbjct: 78 --RTRLDP-------LRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAA----GVNPLQH 124
Query: 594 YITHGMKEGRALGISGMQFKSVMNLSEKSRDKADL 628
+ T G EGR S ++ + L + D
Sbjct: 125 FRTDGRAEGREAAPSPIEPDRLRALDGVAEDHRLT 159
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 45/137 (32%), Gaps = 20/137 (14%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR P F A Y + + D H++ FG R D
Sbjct: 23 GRVPKLFDAAYYRERNPGAARSGLDP-------FLHYAWFGARRDRNPNADFDTAF---- 71
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
R G R RHY G +G +P F Y+A + D++ A +
Sbjct: 72 -YRRQSGRTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVNP-------LQ 123
Query: 553 HFSNFGYEEGRSITFNP 569
HF G EGR +P
Sbjct: 124 HFRTDGRAEGREAAPSP 140
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 11/100 (11%)
Query: 301 SSGLDTF----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
SGLD F ++ A F+ A + + D L
Sbjct: 43 RSGLDPFLHYAWFGARRDRNPNADFDTAFYRRQSGRTRLDPLR---HYGQIGAAQGLDPS 99
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
S Y A Y D++ ++HF G +EGR+
Sbjct: 100 PGFSTSLYLARYPDVVAA----GVNPLQHFRTDGRAEGRE 135
>gi|257791800|ref|YP_003182406.1| cell wall hydrolase/autolysin [Eggerthella lenta DSM 2243]
gi|257475697|gb|ACV56017.1| cell wall hydrolase/autolysin [Eggerthella lenta DSM 2243]
Length = 1805
Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 327 VYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES-MK 384
+ + D + D E + Y + D++ G+ E +
Sbjct: 1692 ITSRSAWIDDEILD-ESFTGSVSASTGLGYGAVYDAAYYGKNNPDVVDACGEGNSEGIFE 1750
Query: 385 HFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
HF FG++EGR + TFD + Y SY DLR+ FG D A HYI +G EGR+
Sbjct: 1751 HFIHFGMAEGRRANETFDVFRYRTSYADLRSAFGDDLKAYYEHYIEYGQFEGRS 1804
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
+ A Y ++ D+++A + + +HF +FG EGR FD + Y SY DLR+
Sbjct: 1724 YDAAYYGKNNPDVVDACGEGNS--EGIFEHFIHFGMAEGRRANETFDVFRYRTSYADLRS 1781
Query: 498 VFGSDRGAAARHYITHGVKEGRN 520
FG D A HYI +G EGR+
Sbjct: 1782 AFGDDLKAYYEHYIEYGQFEGRS 1804
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D+ YL + R + +D A AR + + + Y+ + D+ + +
Sbjct: 448 DATYYLSD-EGCRRLGQADADAIARQFPQSAWVD--YSAVYDFNYYLEYNSDVRDHYGSD 504
Query: 460 PDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+G HF +G EGR +FD Y +YDDLR+VFG+D HY+ +G +E
Sbjct: 505 DPEGALG--HFLTYGMGEGRKAIASFDVDFYRQNYDDLRSVFGNDLRKYYLHYVEYGQQE 562
Query: 518 GRNPDAF 524
GR D
Sbjct: 563 GRVADRL 569
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYE---------DLIQVIG-QDVFESMKHFYEF 389
RL AD + Q + ++Y+A Y+ D+ G D ++ HF +
Sbjct: 457 GCRRLGQADADAIARQFPQSAWVDYSAVYDFNYYLEYNSDVRDHYGSDDPEGALGHFLTY 516
Query: 390 GLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G+ EGR +FD Y +YDDLR+VFG+D HY+ +G +EGR
Sbjct: 517 GMGEGRKAIASFDVDFYRQNYDDLRSVFGNDLRKYYLHYVEYGQQEGR 564
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
E G Y S + R + +D A AR + + + Y+ +
Sbjct: 438 IEHGFISNAGDATYYLSDEGCRRLGQADADAIARQFPQSAWVD--YSAVYDFNYYLEYNS 495
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
D+ + + D + HF +G EGR +F+ D Y +YDDL +VFG+D
Sbjct: 496 DVRDHYGS--DDPEGALGHFLTYGMGEGRKAIASFDVDFYRQNYDDLRSVFGNDLRKYYL 553
Query: 593 HYITHGMKEGR 603
HY+ +G +EGR
Sbjct: 554 HYVEYGQQEGR 564
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 451
G +D+ Y + D+ + G + H+I G+ EGR + F Y S+ D
Sbjct: 1719 GYGAVYDAAYYGKNNPDVVDACGEGNSEGIFEHFIHFGMAEGRRANETFDVFRYRTSYAD 1778
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
L +AF D ++ +H+ +G EGR
Sbjct: 1779 LRSAFGDD---LKAYYEHYIEYGQFEGRSA 1805
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWN 581
+ A Y ++ D+++A + + +HF +FG EGR TF+ Y TSY DL +
Sbjct: 1724 YDAAYYGKNNPDVVDACGEGNS--EGIFEHFIHFGMAEGRRANETFDVFRYRTSYADLRS 1781
Query: 582 VFGSDRSAAAQHYITHGMKEGRA 604
FG D A +HYI +G EGR+
Sbjct: 1782 AFGDDLKAYYEHYIEYGQFEGRS 1804
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 535
G +D+ Y + D+ + G + H+I G+ EGR + F Y S+ D
Sbjct: 1719 GYGAVYDAAYYGKNNPDVVDACGEGNSEGIFEHFIHFGMAEGRRANETFDVFRYRTSYAD 1778
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
L +AF D ++A +H+ +G EGRS
Sbjct: 1779 LRSAFGDD---LKAYYEHYIEYGQFEGRSA 1805
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEGR--ALGISGMQF-KSVMN 617
G ++ Y + D+ + G S +H+I GM EGR ++ S +
Sbjct: 1719 GYGAVYDAAYYGKNNPDVVDACGEGNSEGIFEHFIHFGMAEGRRANETFDVFRYRTSYAD 1778
Query: 618 LSEKSRDKADLSLSFDH 634
L D DL ++H
Sbjct: 1779 LRSAFGD--DLKAYYEH 1793
>gi|300864914|ref|ZP_07109758.1| hypothetical protein OSCI_1150008 [Oscillatoria sp. PCC 6506]
gi|300337085|emb|CBN54908.1| hypothetical protein OSCI_1150008 [Oscillatoria sp. PCC 6506]
Length = 1995
Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 11/194 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTI-YDSGG--DDLL-----DLTLIGGVKNYIDLNTESWSSI 253
GN+ Q + SGG +D L + T++G + + I L + +
Sbjct: 1800 AGNDTIDAGKDNDFGRGGQNDDWISGGLGEDTLCGDAGNDTVLGELGDDILLGNKGDDVV 1859
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + +S+ G +GND+V G N+ +G+D G G D+ A +
Sbjct: 1860 SGNAGQDIVWGGEGNDSLHGGNGNDLVCGGIGNDTLLGDNGDDTLYGGDGDDSLTGGAGN 1919
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK--QRSILEYTASYEDL 371
++ + + A ++ D QDFL ++ L FAD I + + +I+ TAS + L
Sbjct: 1920 DVFVLTPSQGAGVITD-FMVGQDFLKLIDNLSFADLTITPGSGERVGDTIIRVTASNQLL 1978
Query: 372 IQVIGQDVFESMKH 385
+ + G
Sbjct: 1979 VSLTGVSADSITAD 1992
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 42/152 (27%), Gaps = 7/152 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D +++G N + + I GY N TI + G +D + G +
Sbjct: 1775 DDSILGKGSNDVLFGNQGKDVIYGYAGNDTIDAGKDNDFGRGGQNDDWISGGLGEDTLCG 1834
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFAD 348
+GND G G D NA D L + +
Sbjct: 1835 DAGNDTVLGELGDDILLGNKGDD----VVSGNAGQDIVWGGEGNDSLHGGNGNDLVCGGI 1890
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ L + L G DVF
Sbjct: 1891 GNDTLLGDNGDDTLYGGDGDDSLTGGAGNDVF 1922
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 46/143 (32%), Gaps = 10/143 (6%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---------ESSGN 295
L +++ G + +I + + G+ G DV+ G + N+ +
Sbjct: 1761 LGDNDANTLNGAIGDDSILGKGSNDVLFGNQGKDVIYGYAGNDTIDAGKDNDFGRGGQND 1820
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G G DT A + + + I++ + + + + + +
Sbjct: 1821 DWISGGLGEDTLCGDAGNDTV-LGELGDDILLGNKGDDVVSGNAGQDIVWGGEGNDSLHG 1879
Query: 356 VKQRSILEYTASYEDLIQVIGQD 378
++ + L+ G D
Sbjct: 1880 GNGNDLVCGGIGNDTLLGDNGDD 1902
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ G+D ++G +N+V F + G DV G +G DT + + + ++ I
Sbjct: 1768 TLNGAIGDDSILGKGSNDVLFGNQGKDVIYGYAGNDTIDAGKDNDFGRGGQNDDWI---- 1823
Query: 330 ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +D L + + + + K ++ A + + G D
Sbjct: 1824 SGGLGEDTLCGDAGNDTVLGELGDDILLGNKGDDVVSGNAGQDIVWGGEGNDSL 1877
Score = 37.4 bits (85), Expect = 7.9, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-- 334
+DV++G++ N + G+D G D F + Y + I N+
Sbjct: 1757 HDVLLGDNDANTLNGAIGDDSILGKGSNDVLFGNQGKDVIYGYAGNDTIDAGKDNDFGRG 1816
Query: 335 ---QDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D++S E D D+V + + +D++
Sbjct: 1817 GQNDDWISGGLGEDTLCGDAGNDTVLGELGDDILLGNKGDDVV 1859
>gi|163850263|ref|YP_001638306.1| hypothetical protein Mext_0830 [Methylobacterium extorquens PA1]
gi|163661868|gb|ABY29235.1| hypothetical protein Mext_0830 [Methylobacterium extorquens PA1]
Length = 294
Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 52/160 (32%), Gaps = 25/160 (15%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR 419
L A Y + + + + H+ FG R+ FD+ Y R G R
Sbjct: 28 LFDAAYYRERNPGVARSGLDPFLHYAWFGARRDRNPNADFDTAFY-------RRQSGRTR 80
Query: 420 GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
RHY G +G +P F Y+A + D++ A + HF G EG
Sbjct: 81 LDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVNP-------LLHFRTDGRAEG 133
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
R D G A H +T EG
Sbjct: 134 REAAPSPIE-----PDRLRALD---GVAEDHRLTLPEAEG 165
Score = 77.5 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 49/155 (31%), Gaps = 22/155 (14%)
Query: 478 GRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
GR FD+ Y + G D HY G + RNP+A F Y
Sbjct: 23 GRVPKLFDAAYYRERNPGVARS-GLD---PFLHYAWFGARRDRNPNADFDTAFYRRQSG- 77
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
D H+ G +G S F+ LYL Y D+ H
Sbjct: 78 --RTRLDP-------LRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAA----GVNPLLH 124
Query: 594 YITHGMKEGRALGISGMQFKSVMNLSEKSRDKADL 628
+ T G EGR S ++ + L + D
Sbjct: 125 FRTDGRAEGREAAPSPIEPDRLRALDGVAEDHRLT 159
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 46/137 (33%), Gaps = 20/137 (14%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR P F A Y + + + D H++ FG R D
Sbjct: 23 GRVPKLFDAAYYRERNPGVARSGLDP-------FLHYAWFGARRDRNPNADFDTAF---- 71
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
R G R RHY G +G +P F Y+A + D++ A +
Sbjct: 72 -YRRQSGRTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVNP-------LL 123
Query: 553 HFSNFGYEEGRSITFNP 569
HF G EGR +P
Sbjct: 124 HFRTDGRAEGREAAPSP 140
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 11/100 (11%)
Query: 301 SSGLDTF----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
SGLD F ++ A F+ A + + D L
Sbjct: 43 RSGLDPFLHYAWFGARRDRNPNADFDTAFYRRQSGRTRLDPLR---HYGQIGAAQGLDPS 99
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
S Y A Y D++ + HF G +EGR+
Sbjct: 100 PGFSTSLYLARYPDVVAA----GVNPLLHFRTDGRAEGRE 135
>gi|260787545|ref|XP_002588813.1| hypothetical protein BRAFLDRAFT_89756 [Branchiostoma floridae]
gi|229273983|gb|EEN44824.1| hypothetical protein BRAFLDRAFT_89756 [Branchiostoma floridae]
Length = 393
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 64/187 (34%), Gaps = 43/187 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
W + Y+ + + + +AR A W + LTF +DI+
Sbjct: 132 WQKRDLTYRIAQYPGE----NHLLHSEVDEAIAR-AFQIWEEATLLTFTAIDTKADIEIK 186
Query: 83 S------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHEIG 129
+ + + + F +++FD A++W GT L ALHE G
Sbjct: 187 FARGDHGDDTPFDGSGHTLAHAFSPGDGIHGDVHFDDAELWTVDSPMGTNLFMVALHEFG 246
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H+LGL H + + SVM + P D++
Sbjct: 247 HSLGLNHSDNTD-------------------SVMYPWYPGYPGSSYK------LPTVDVM 281
Query: 190 AVQKIYG 196
A+Q +YG
Sbjct: 282 AIQALYG 288
>gi|16265074|ref|NP_437866.1| putative protease protein [Sinorhizobium meliloti 1021]
gi|15141213|emb|CAC49726.1| putative protease [Sinorhizobium meliloti 1021]
Length = 213
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 35/142 (24%)
Query: 184 MVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDS-------------PFIQTIYDSGGDD 229
M+ DI A+Q++YGA + GN +YK + P ++ +D GG D
Sbjct: 1 MMGDIAALQEMYGADFTTNSGNTVYKGTPGSGATFVNGAGRNLAGRQPQLRHHWDGGGKD 60
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIG-----------------GYEKNMTIAQHTV---IE 269
DLT +DL S+ G N + + IE
Sbjct: 61 TYDLTAYT-TALKVDLRPGKASTFSIDQLAWLDGGPNGGFAAGNIFNALLYRGDTRSLIE 119
Query: 270 SVVGSSGNDVVIGNSANNVFFE 291
+V G S D + GN A NV +
Sbjct: 120 NVKGGSAGDAITGNQAANVLWG 141
>gi|113478121|ref|YP_724182.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
gi|110169169|gb|ABG53709.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
Length = 3427
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 6/163 (3%)
Query: 225 SGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G+D +D +L+G + I E ++ G N I + + G +G+D
Sbjct: 1717 GDGNDEIDGGKGNDSLVGDQGDDILYGREGNDTLKGDSGNDLIFGGVGNDILYGGTGDDY 1776
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G N+ + SGND +G G D Y I + + ++ + +
Sbjct: 1777 LDGGEGNDTIYPGSGNDTINGGEGNDLLVLSGAKSDYIITDTSTGKEITNKRDNSKKIVF 1836
Query: 340 DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+E + + Q ++ N + + + + G+
Sbjct: 1837 GIENISYEQIQQGNASNGPLANATVFIDTNSNFQLDKGETQTN 1879
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 59/188 (31%), Gaps = 33/188 (17%)
Query: 223 YDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG----- 276
YD GG+D +D G + G N ++ + + G +G
Sbjct: 1543 YDGQGGNDTID--GGNGKD-----------HLMGGVGNDSLKGGNDEDKLEGGAGHDYLH 1589
Query: 277 ----NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
ND + GN ++ + GND+ DG SG D + K + + D ++
Sbjct: 1590 GQRDNDFLYGNDHDDRLYGEDGNDMLDGGSGNDQLYGGNGRDQLKGGSGNDKLYGEDKSD 1649
Query: 333 HKQDFLSDVERLRFADQCI--------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + E D + LE ++ L D E +
Sbjct: 1650 VLEGGMGNDELHGGNDNDVLKGESGKDTLRGGSGSDKLEGGEDHDHLYGESDSDKLEGGQ 1709
Query: 385 --HFYEFG 390
+ G
Sbjct: 1710 GDDYLNGG 1717
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 225 SGGDDLL-----DLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGN 277
GGDD L T+ GG N D ++ + G + IA + + + G GN
Sbjct: 2314 KGGDDKLMGGQGKDTIQGGKGN--DEIEGNFGEDVLEGNAGDDVIAGGSEDDLIKGGPGN 2371
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + GN+ ++ +SGND +G G D + E + + D
Sbjct: 2372 DFLDGNTGDDQLEGNSGNDQLEGGKGNDILKGNRDNDW---LVGEAGEDILNGGP-GVDL 2427
Query: 338 LSDVE 342
L E
Sbjct: 2428 LRGGE 2432
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 22/190 (11%)
Query: 204 NNIYKIEVQQKDS--PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--SIGGYEKN 259
+++Y+I+ + Q GG+D + ++ DL + +I G + +
Sbjct: 3202 DDVYEIQPSTLEDYPDGFQA---KGGNDRVTGSMRS------DLISGGQGQDTISGNDGD 3252
Query: 260 MTIAQHTVIESVVGSSGNDVV---------IGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I ++ + G GND++ G N+ G D +G G D
Sbjct: 3253 DRIIGGPGVDYLYGKDGNDLLEGRTENDYLFGGPGNDALIGGQGRDKLNGGQGSDFLIGG 3312
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + E + ++ DF D + + + ++ K +
Sbjct: 3313 ASKDKFIFATNEEFDVEAIGSDTIDDFNPDDDIILLDKKTFTALESKSGEGFSLETEFAS 3372
Query: 371 LIQVIGQDVF 380
+ + +
Sbjct: 3373 VTKNVATSEA 3382
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 10/185 (5%)
Query: 222 IYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSG 276
+Y G+D+LD G L S + + G +K+ + + + G +
Sbjct: 1606 LYGEDGNDMLDGGSGNDQLYGGNGRDQLKGGSGNDKLYGEDKSDVLEGGMGNDELHGGND 1665
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
NDV+ G S + SG+D +G D + + S + + ++ + D N+ D
Sbjct: 1666 NDVLKGESGKDTLRGGSGSDKLEGGEDHDHLYGESDSDKLEGGQGDDYLNGGDGNDEI-D 1724
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
+ L + L+ + + + +G D+ + + + G EG
Sbjct: 1725 GGKGNDSLVGDQGDDILYGREGNDTLKGDSGNDLIFGGVGNDILYGGTGDDYLDGG--EG 1782
Query: 395 RDITF 399
D +
Sbjct: 1783 NDTIY 1787
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 39/142 (27%), Gaps = 12/142 (8%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + IA + ++GS G+D++ G ++ G D G G D
Sbjct: 2286 GSFGDDEIAGQEKNDKLLGSYGDDMLKGKGGDDKLMGGQGKDTIQGGKGNDEIEGNFGED 2345
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
NA A + D + F D LE + + L
Sbjct: 2346 ----VLEGNAGDDVIAGGSEDDLIKGGPGNDFLDGNTGDDQ------LEGNSGNDQLEGG 2395
Query: 375 IGQD--VFESMKHFYEFGLSEG 394
G D + E
Sbjct: 2396 KGNDILKGNRDNDWLVGEAGED 2417
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 3/138 (2%)
Query: 247 TESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
T S+ I G EKN + + + G G+D ++G + GND +G+ G
Sbjct: 2285 TGSFGDDEIAGQEKNDKLLGSYGDDMLKGKGGDDKLMGGQGKDTIQGGKGNDEIEGNFGE 2344
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D A + E+ +I D + ++L K IL+
Sbjct: 2345 DVLEGNAGDDVIA-GGSEDDLIKGGPGNDFLDGNTGDDQLEGNSGNDQLEGGKGNDILKG 2403
Query: 365 TASYEDLIQVIGQDVFES 382
+ L+ G+D+
Sbjct: 2404 NRDNDWLVGEAGEDILNG 2421
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 16/134 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +++ G GND + GN +V ++G+DV G S D
Sbjct: 2311 LKGKGGDDKLMGGQGKDTIQGGKGNDEIEGNFGEDVLEGNAGDDVIAGGSEDDLIKGGPG 2370
Query: 313 SYLYKIYRFENAIIVYDANEH-----KQDFLSD-----------VERLRFADQCIDSVNV 356
+ ++ + N+ D L E + +D +
Sbjct: 2371 NDFLDGNTGDDQLEGNSGNDQLEGGKGNDILKGNRDNDWLVGEAGEDILNGGPGVDLLRG 2430
Query: 357 KQRSILEYTASYED 370
+ + + Y D
Sbjct: 2431 GEGADVFYFQKPSD 2444
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 220 QTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSS---IGGYEKNMTIAQHTVIESVVGS 274
TI G+D + + N D S I G N + +T + + G+
Sbjct: 2327 DTIQGGKGNDEIEGNFGEDVLEGNAGDDVIAGGSEDDLIKGGPGNDFLDGNTGDDQLEGN 2386
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SGND + G N++ + ND G +G D L + + ++
Sbjct: 2387 SGNDQLEGGKGNDILKGNRDNDWLVGEAGEDILNGGPGVDLLRGGEGADVFYFQKPSDKG 2446
Query: 335 QDFLSDVE 342
D + D +
Sbjct: 2447 -DLIIDFD 2453
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + N +++ G +G D ++G N+ + D +G +G D
Sbjct: 1533 NVSLGDGNQEYDGQGGNDTIDGGNGKDHLMGGVGNDSLKGGNDEDKLEGGAGHDYLHGQR 1592
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ + D N D S ++L + D + + Y D+
Sbjct: 1593 DNDFLYGNDHDDRLYGEDGN-DMLDGGSGNDQL-YGGNGRDQLKGGSGNDKLYGEDKSDV 1650
Query: 372 IQ 373
++
Sbjct: 1651 LE 1652
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 10/114 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V GN G N+ +G D G G D+ + K+ ++
Sbjct: 1532 QNVSLGDGNQEYDGQGGNDTIDGGNGKDHLMGGVGNDSLKGG--NDEDKLEGGAGHDYLH 1589
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ DFL D +L+ + + L G+D +
Sbjct: 1590 GQRDN--DFLYG------NDHDDRLYGEDGNDMLDGGSGNDQLYGGNGRDQLKG 1635
>gi|189220034|ref|YP_001940674.1| glycosyltransferase [Methylacidiphilum infernorum V4]
gi|189186892|gb|ACD84077.1| Glycosyltransferase [Methylacidiphilum infernorum V4]
Length = 826
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 20/124 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y+ D+ A RHY G NP+ F Y+ + +++
Sbjct: 478 FDPDFYILQAPDVSR------EEALRHYFREGYIADLNPNPYFDTAYYVKQNPEVVQQKI 531
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ HF G R + FD YL Y ++ H++ G
Sbjct: 532 NP-------LIHFIEKGALNRRNPSPYFDIQYYLEQYPEVAEQ----NLNPLSHFLIQGR 580
Query: 516 KEGR 519
KEGR
Sbjct: 581 KEGR 584
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 20/130 (15%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y D+ E+++H++ G + FD+ Y+ ++
Sbjct: 476 NLFDPDFYILQAPDV------SREEALRHYFREGYIADLNPNPYFDTAYYVKQNPEVVQ- 528
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ H+I G RNP + Y+ + ++ + HF
Sbjct: 529 ---QKINPLIHFIEKGALNRRNPSPYFDIQYYLEQYPEVAEQNLNP-------LSHFLIQ 578
Query: 474 GCEEGRFVTF 483
G +EGR
Sbjct: 579 GRKEGRLSRP 588
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 20/124 (16%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y+ D+ R A RHY G NP+ F Y+ + +++
Sbjct: 478 FDPDFYILQAPDV------SREEALRHYFREGYIADLNPNPYFDTAYYVKQNPEVVQQKI 531
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ HF G R S F+ YL Y ++ H++ G
Sbjct: 532 NP-------LIHFIEKGALNRRNPSPYFDIQYYLEQYPEVAE----QNLNPLSHFLIQGR 580
Query: 600 KEGR 603
KEGR
Sbjct: 581 KEGR 584
Score = 40.5 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 18/101 (17%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY--EEGRSITFNPDLYLTSYDDL 579
+ F YI D+ + H+ GY + + F+ Y+ ++
Sbjct: 476 NLFDPDFYILQAPDVSR---------EEALRHYFREGYIADLNPNPYFDTAYYVKQNPEV 526
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
+ H+I G R F L +
Sbjct: 527 V----QQKINPLIHFIEKGALNRRN---PSPYFDIQYYLEQ 560
>gi|209522962|ref|ZP_03271519.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209496549|gb|EDZ96847.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 1252
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 5/165 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ P +I G+D++D GG N L E SI G N +I + I S+ G
Sbjct: 847 EGGPGNDSIVGGSGNDVID----GGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFG 902
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D +IG + N+ GND G +G DT F + + R +N + D N+
Sbjct: 903 EGGDDTIIGGNDGNLLSGGDGNDSLTGGTGNDTIFGGDGNDTIRTERGDNQLFGDDGNDL 962
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + ++ + + + + ++ G D
Sbjct: 963 IFGGI-GRDLIQGGLGNDTLIGGSGNNTIFGGPGNDSIVGGEGDD 1006
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 79/229 (34%), Gaps = 28/229 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
TI+ G+D + D TL GG N + +SI G N +I
Sbjct: 978 NDTLIGGSGNNTIFGGPGNDSIVGGEGDDTLFGGEGNDTIEGSGGDNSIFGGAGNDSIIA 1037
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V G+D V G N++ F SGND G SG DT A S L N
Sbjct: 1038 GPGNDTVFAGPGSDQVFGGDGNDLIFGDSGNDTLFGGSGDDTISGGAGSDLLT-GDAGNN 1096
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ Y D ++D ++ D+ + L+ +G
Sbjct: 1097 VFYYLNPGEGVDIITDFKQ-PGNDRFLIVSGENNFDG---------LVPTVGTAAAPLQS 1146
Query: 385 HFYEFGLSEGRDI----------TFDSYLYLGSYDDLRNVFGSDRGAAA 423
SEG DI TFD+ L+N GSD G+A
Sbjct: 1147 AIISALGSEGTDISGRQLIIFQDTFDNIQ--AVNAALKNQRGSDGGSAL 1193
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 51/176 (28%), Gaps = 16/176 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI+ G+D + + + G + N I +
Sbjct: 924 NDSLTGGTGNDTIFGGDGNDTIR-------------TERGDNQLFGDDGNDLIFGGIGRD 970
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND +IG S NN F GND G G DT F + I ++
Sbjct: 971 LIQGGLGNDTLIGGSGNNTIFGGPGNDSIVGGEGDDTLFGGEGND--TIEGSGGDNSIFG 1028
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDVFESMK 384
+ FA D V + ++ + + L G D
Sbjct: 1029 GAGNDSIIAGPGNDTVFAGPGSDQVFGGDGNDLIFGDSGNDTLFGGSGDDTISGGA 1084
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 14/173 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + I GG+D L + + + G N +I + +
Sbjct: 816 DDNIVGTALSEYIQGFGGNDTL-------------VGVGGRNILEGGPGNDSIVGGSGND 862
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND ++GN N+ F GND G SG+++ F N + D
Sbjct: 863 VIDGGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFGEGGDDTIIGGNDGNLLSGGD 922
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N+ + + + D + + L + + IG+D+ +
Sbjct: 923 GNDSLTGG-TGNDTIFGGDGNDTIRTERGDNQLFGDDGNDLIFGGIGRDLIQG 974
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 76/248 (30%), Gaps = 21/248 (8%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G Y + D+ SY + + D + + D+ Q I G +G
Sbjct: 209 GAGIFTYRPNPDFFGTDRF----SYNVTDGTDSDLA-QVVISVQPGDLA--QIIEGIGQG 261
Query: 201 SLGNN-IYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ G++ I + TI+ G+DLL G + + + ++ G
Sbjct: 262 TTGDDSIIGSSGDDVINGLAGNDTIFGLAGNDLL----QGDEGDDLLFGNQGNDTLDGGP 317
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N T + ++G GND++ GN N+ G D G G D + L
Sbjct: 318 GNDTAYGGQDNDLIIGGDGNDLLFGNLGNDTLLGGPGADSMYGGDGNDCIRGGVGNDL-- 375
Query: 318 IYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
F + + D + E + D + + +I
Sbjct: 376 --IFGDKGNDILWGDDGNDTIYGGEGDDLIFGNDGADLLFGGVGNDTIFGGPGNDTIIGG 433
Query: 375 IGQDVFES 382
G D
Sbjct: 434 EGDDQIAG 441
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 19/176 (10%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ G+D + GG + + I G + + +++ G
Sbjct: 378 GDKGNDILWGDDGNDTI----YGGEGDDL---------IFGNDGADLLFGGVGNDTIFGG 424
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--- 331
GND +IG ++ G+D+ G G DT + S + I V +AN
Sbjct: 425 PGNDTIIGGEGDDQIAGEVGDDLLFGGLGADTLTGGSGSDTFAIAEGSGGGSVEEANVIN 484
Query: 332 --EHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDVFESMK 384
D + + L F I + I+ + E L +IG +
Sbjct: 485 DFTGGTDKIGLLGNLTFEQLSITQSEENAGNAIIRNGSDGEFLAVLIGVNSNNLTA 540
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 9/164 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ GN+ + Q I G+DLL G + N L S+ G
Sbjct: 306 GNQGNDTLDGGPGNDTAYGGQDNDLIIGGDGNDLL----FGNLGNDTLLGGPGADSMYGG 361
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N I + + G GND++ G+ N+ + G+D+ G+ G D F +
Sbjct: 362 DGNDCIRGGVGNDLIFGDKGNDILWGDDGNDTIYGGEGDDLIFGNDGADLLFGGVGND-- 419
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
I+ + Q + L F D++ S
Sbjct: 420 TIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGLGADTLTGGSGS 463
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 55/177 (31%), Gaps = 7/177 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS------SIGGYEKNMT 261
Q+ IY SG + +D + + L + +S I G +++
Sbjct: 759 GDRFSQESINTGAIIYTSGRESGVDDLVFRLTDSVATLPQQIFSISVVDDFIQGTDEDDN 818
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + E + G GND ++G N+ GND G SG D + +
Sbjct: 819 IVGTALSEYIQGFGGNDTLVGVGGRNILEGGPGNDSIVGGSGNDVIDGGEGNDTL-LGNE 877
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N I S + L + ++L + L G D
Sbjct: 878 GNDSIFGGPGNDSIIGGSGINSLFGEGGDDTIIGGNDGNLLSGGDGNDSLTGGTGND 934
>gi|170744535|ref|YP_001773190.1| hypothetical protein M446_6498 [Methylobacterium sp. 4-46]
gi|168198809|gb|ACA20756.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 120
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL +Y D+ G D HY+T G KEGR+P A F Y++++ D+ A
Sbjct: 26 FDPVFYLATYPDVAE-HGCD---PLEHYLTFGWKEGRDPSAQFSTSGYLSANPDVAEAGI 81
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF 480
+ H+ G EGR
Sbjct: 82 NP-------LVHYRMHGLAEGRS 97
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
+ ++ + Y A+Y D+ + + ++H+ FG EGRD + F + YL +
Sbjct: 17 SRATWSMGGFDPVFYLATYPDVAE----HGCDPLEHYLTFGWKEGRDPSAQFSTSGYLSA 72
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+ G + HY HG+ EGR+
Sbjct: 73 NPDVAEA-GIN---PLVHYRMHGLAEGRS 97
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL +Y D+ G D HY+T G KEGR+P A F Y++++ D+ A
Sbjct: 25 GFDPVFYLATYPDVAE-HGCD---PLEHYLTFGWKEGRDPSAQFSTSGYLSANPDVAEAG 80
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRS 564
+ H+ G EGRS
Sbjct: 81 INP-------LVHYRMHGLAEGRS 97
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F + Y+A++ D+ D +H+ FG++EGR + F+ YL++ D+
Sbjct: 25 GFDPVFYLATYPDVAEHGCDP-------LEHYLTFGWKEGRDPSAQFSTSGYLSANPDVA 77
Query: 581 NVFGSDRSAAAQHYITHGMKEGRA 604
HY HG+ EGR+
Sbjct: 78 EA----GINPLVHYRMHGLAEGRS 97
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
+ F + Y+A++ D+ D +H+ FG +EGR + F + YL +
Sbjct: 22 SMGGFDPVFYLATYPDVAEHGCDP-------LEHYLTFGWKEGRDPSAQFSTSGYLSANP 74
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRN 520
D+ HY HG+ EGR+
Sbjct: 75 DVAEAG----INPLVHYRMHGLAEGRS 97
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
F+P YL +Y D+ +HY+T G KEGR QF + LS
Sbjct: 26 FDPVFYLATYPDVAE----HGCDPLEHYLTFGWKEGRD---PSAQFSTSGYLSAN 73
>gi|323137764|ref|ZP_08072840.1| proprotein convertase P [Methylocystis sp. ATCC 49242]
gi|322397061|gb|EFX99586.1| proprotein convertase P [Methylocystis sp. ATCC 49242]
Length = 606
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 6/180 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT-- 266
+ I G+D ++ +Y + ++ ++ TI T
Sbjct: 266 FNDTLVGNAGANIIEGGPGNDSINGAAGSDTASYENASSRVVVNLALTSAQNTIGAGTDT 325
Query: 267 --VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE++ GS ND +IGN+ NV GND +G +G DT Y + ++ +
Sbjct: 326 LLQIENLRGSRFNDTLIGNNGPNVIEGGPGNDSINGGAGFDTASYEHANA--RVVVNLSI 383
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D L+ +E L + + +++E + + G D +
Sbjct: 384 AGAQNTIGAGVDTLTSIENLIGSSFNDTLIGNGGPNVIEGGPGNDSINGGAGIDTVSYLH 443
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 6/175 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-- 265
+ + I G+D ++ +Y N ++ TI
Sbjct: 336 RFNDTLIGNNGPNVIEGGPGNDSINGGAGFDTASYEHANARVVVNLSIAGAQNTIGAGVD 395
Query: 266 --TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T IE+++GSS ND +IGN NV GND +G +G+DT Y + ++ +
Sbjct: 396 TLTSIENLIGSSFNDTLIGNGGPNVIEGGPGNDSINGGAGIDTVSYLHATA--RVVVNLS 453
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D L+ +E + +++E A + + +G+D
Sbjct: 454 IVGAQNTQGAGVDTLTAIENIVGTPFNDVLTGNNLANVIEGGAGKDIVRGGLGRD 508
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 31/234 (13%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-----GNNIYKIEVQQKDSPFIQT---- 221
+ ++SF +D++ ++G G + I ++ + T
Sbjct: 138 TPGNSSFNASGWVFKTDLITYGAVWGPYVYPGLGEVGGVDTIHINGSTGNNNIVGTSQDD 197
Query: 222 -IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK-----NMTIA--QHTV------ 267
I S GDD ++ KN ID S ++ + N+ +A Q+T+
Sbjct: 198 IISGSAGDDNIEGRT---GKNRIDGGPGSDTASYTRARSRVAVNLALAGPQNTLGAGIDT 254
Query: 268 ---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+++GS+ ND ++GN+ N+ GND +G++G DT Y S ++
Sbjct: 255 LLQIENLIGSAFNDTLVGNAGANIIEGGPGNDSINGAAGSDTASYENASS--RVVVNLAL 312
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D L +E LR + + +++E + + G D
Sbjct: 313 TSAQNTIGAGTDTLLQIENLRGSRFNDTLIGNNGPNVIEGGPGNDSINGGAGFD 366
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 7/148 (4%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ P +I G D + L + ++L+ + G + T IE++VG
Sbjct: 422 EGGPGNDSINGGAGIDTVSY-LHATARVVVNLSIVGAQNTQGAGVDTL----TAIENIVG 476
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ NDV+ GN+ NV +G D+ G G DTF + + + + + I+ + +
Sbjct: 477 TPFNDVLTGNNLANVIEGGAGKDIVRGGLGRDTFVFARLTDM-SVGPNRDVIVDFTSGVD 535
Query: 334 KQD-FLSDVERLRFADQCIDSVNVKQRS 360
+ D + D + DQ + S
Sbjct: 536 RIDLWRVDANTSQPGDQSFTYIGASGFS 563
>gi|78189852|ref|YP_380190.1| Nidogen, extracellular region [Chlorobium chlorochromatii CaD3]
gi|78172051|gb|ABB29147.1| Nidogen, extracellular region [Chlorobium chlorochromatii CaD3]
Length = 1557
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 24/197 (12%)
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG- 226
D D F + +++ ++ A ++GNN ++D G
Sbjct: 305 EVDGGFDTIFAATTYTLPNNVEVLRLTGAASVNAIGNN----GDNIFVGNIGNNLFDGGD 360
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND-------- 278
G D +D + + ++L + SIGGYE + T + IE++ GS+ +D
Sbjct: 361 GFDTVDYS-RSRSEITVNLTQTTPYSIGGYEGSDTFLR---IENLYGSTYSDYLQGNNSE 416
Query: 279 -VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA------N 331
++ GN+ + + GND DG G+DT + Y I + + +
Sbjct: 417 NILRGNAGADTLQGNGGNDTLDGGDGVDTIWLANSFSEYTITYNAASGFLQSVHNSTIES 476
Query: 332 EHKQDFLSDVERLRFAD 348
D L VE LRF+D
Sbjct: 477 SDGIDSLRYVEYLRFSD 493
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 7/146 (4%)
Query: 191 VQKIYGAPKGSLG---NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ Y A + G +Y + + + G +L G + L+T
Sbjct: 170 IVFRYEAVNWTTGIASGGLYGLGGTVARAGYST----GDGSAWYELPQSGNQDAMLSLDT 225
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++ T+ + + G+ G+D++ G++ ++ + +GND G+SG D
Sbjct: 226 SAGNTGEAGSYLFTVRNSQEVGVLNGTEGDDLLAGSTMHDTIYGFAGNDYLIGNSGDDLL 285
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEH 333
A Y + + D
Sbjct: 286 VGGAGDDTYTVDEGDIITEEVDGGFD 311
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 8/181 (4%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ IY + + GDD + + +D + +I T
Sbjct: 265 DTIYGFAGNDYLIGNSGDDLLVGGAGDDTYTVDEGDIITEEVD---GGFDTIFAATT-YT 320
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + + G++ + + GN+ +N+F + GN++FDG G DT Y +
Sbjct: 321 LPNNVEVLRLTGAASVNAI-GNNGDNIFVGNIGNNLFDGGDGFDTVDYSRSRSEITVNLT 379
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D +E L + +IL A + L G D +
Sbjct: 380 QTTPY-SIGGYEGSDTFLRIENLYGSTYSDYLQGNNSENILRGNAGADTLQGNGGNDTLD 438
Query: 382 S 382
Sbjct: 439 G 439
>gi|332839031|ref|XP_001154045.2| PREDICTED: matrix metalloproteinase-19 [Pan troglodytes]
Length = 505
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 27/152 (17%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + ++ L + A+ R A +WS V LTF+E + +DI
Sbjct: 102 GRWRKKHLTFRILNLPSTLPPHT-------ARAALRQAFQDWSNVAPLTFQEVQAGAADI 154
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ + W G G L A HE+
Sbjct: 155 RLSFHGRQSSYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYHGVNLRIIAAHEV 214
Query: 129 GHALGLMH--------PGSYNGGYPVYGVDND 152
GHALGL H Y G P + + D
Sbjct: 215 GHALGLGHSRYSQALMAPVYEGYRPHFKLHPD 246
>gi|148692991|gb|EDL24938.1| matrix metallopeptidase 27 [Mus musculus]
Length = 511
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 66/193 (34%), Gaps = 51/193 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + AL WSKV LTF S +DI
Sbjct: 106 WRKYSLTYRIMNYTPDMTPADV-------DEAIQKALQVWSKVTPLTFTRISKGVADIMI 158
Query: 82 ISSNN----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
G+ P + +FD+ + W G+G L A
Sbjct: 159 AFRTGVHGWCPRHFDGPLGVLGHAFPPGLGLGG--DTHFDEDETWIAKDGEGFNLFLVAA 216
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H T++M P +D S Y +
Sbjct: 217 HEFGHSLGLSHSND-------------------QTALM---FPNYISLDPSK-YPLS--Q 251
Query: 186 SDIVAVQKIYGAP 198
DI +Q IYG+P
Sbjct: 252 DDIDGIQSIYGSP 264
>gi|242000886|ref|XP_002435086.1| matrix metalloproteinase, putative [Ixodes scapularis]
gi|215498416|gb|EEC07910.1| matrix metalloproteinase, putative [Ixodes scapularis]
Length = 550
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 68/199 (34%), Gaps = 44/199 (22%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---E 72
+ L+ W++ + Y+ + N +E+AR A W+ V LTF
Sbjct: 78 YTLQGSKWASTELSYRISKYPRR-----FKDRNAVDKEIAR-AFKMWADVSPLTFTHKKT 131
Query: 73 TSIHSDIKFI---------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++ DI+F+ + G + RY + +FD + W G G L
Sbjct: 132 GPVNIDIQFVRGEHGDGDPFNGPGGTLAHAFFPRYGGDAHFDDEEKWTIGEHGGVNLFQV 191
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE GH+LGL H S+M+ F + T
Sbjct: 192 AAHEFGHSLGLSHSDVRR-------------------SLMAPFYR-------GYEPGFTL 225
Query: 184 MVSDIVAVQKIYGAPKGSL 202
DI +Q +YG
Sbjct: 226 DRDDIDGIQSLYGKITVRR 244
>gi|170747645|ref|YP_001753905.1| hypothetical protein Mrad2831_1218 [Methylobacterium radiotolerans
JCM 2831]
gi|170654167|gb|ACB23222.1| hypothetical protein Mrad2831_1218 [Methylobacterium radiotolerans
JCM 2831]
Length = 518
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 16/133 (12%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD Y Y D+R A H+I HGV+EGR P+ F + I+ + +
Sbjct: 364 FDESFYKNEYSDVR----DSGVNALEHFIQHGVREGRWPNEFFDTIWY------ISEYMN 413
Query: 543 APDLVQAGKDHFSN--FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
++ H+ N G + F+ YL D+ + QH++ G +
Sbjct: 414 YDNVGMNPLIHYCNEWKGMNVNPNPYFSVRSYLEWNPDVA----ASGEEPCQHFLRMGGR 469
Query: 601 EGRALGISGMQFK 613
EGR S +
Sbjct: 470 EGRMTDFSTPFYT 482
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 50/134 (37%), Gaps = 19/134 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y Y D+R A H+I HGV+EGR P+ F + YI+ + + N
Sbjct: 364 FDESFYKNEYSDVR----DSGVNALEHFIQHGVREGRWPNEFFDTIWYISEYMNYDNVGM 419
Query: 458 DAPDLVQVGKDHFSNF--GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ N G F YL D+ +H++ G
Sbjct: 420 NP-------LIHYCNEWKGMNVNPNPYFSVRSYLEWNPDVAASG----EEPCQHFLRMGG 468
Query: 516 KEGRNPDAFKALEY 529
+EGR D F Y
Sbjct: 469 REGRMTD-FSTPFY 481
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 21/182 (11%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDS 401
L+ +D + Y Y D+ +++HF + G+ EGR FD+
Sbjct: 349 LKHSDTPLIVSQTGLFDESFYKNEYSDVR----DSGVNALEHFIQHGVREGRWPNEFFDT 404
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 460
Y+ Y + + G + HY NP+ F Y+ + D+ + +
Sbjct: 405 IWYISEYMN-YDNVGMN---PLIHYCNEWKGMNVNPNPYFSVRSYLEWNPDVAASGEEP- 459
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
HF G EGR F + Y + L + ++ A RH + R
Sbjct: 460 ------CQHFLRMGGREGRMTDFSTPFYTIRPEALDRM---NKVEALRHALKLDRNIDRT 510
Query: 521 PD 522
D
Sbjct: 511 ID 512
>gi|329851779|ref|ZP_08266460.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328839628|gb|EGF89201.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1701
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 8/199 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS-IGGYEKNMTIA 263
S I G+D +D G L + + + G E N T+
Sbjct: 1447 FADNLTGSTSANQIDGGDGNDTIDAGGSSDVVNGQLGDDSLLAGTGADTLDGGEGNDTLD 1506
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ +++ G +G+D + G S +V +GND DG +G DT Y + +
Sbjct: 1507 GGSGNDTMAGGTGDDALTGGSGGDVLIGDAGNDALDGGTGTDTVDYGLATAGVSVSLSMP 1566
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES- 382
+ D L +E L ++ + +IL ++ ++ G D
Sbjct: 1567 GLAQVTGGA-GTDTLVSIENLTGSEFDDFLIGSSGSNILMGGGGHDQIVGRGGNDGLTGG 1625
Query: 383 -MKHFYEFGLSEGRDITFD 400
+ FGL+ G D D
Sbjct: 1626 AGADDFVFGLASGADRVMD 1644
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + L + S + + +T A TVIE VG SG+DV++GNSA N +GND
Sbjct: 1310 GRGTTVTLTSNSSNVVAAITGGLTEATRTVIEDAVGGSGDDVLLGNSAANGLTGGNGNDD 1369
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFEN 323
G +G D + + ++
Sbjct: 1370 LSGRAGDDQLLGGSGNDSISGDAGDD 1395
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 3/140 (2%)
Query: 225 SGGDDLL-DLTLIGGVKNYIDLN-TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G D L + + G +L + S + I G + N TI + V G G+D ++
Sbjct: 1430 GAGTDTLVSVENVTGSAFADNLTGSTSANQIDGGDGNDTIDAGGSSDVVNGQLGDDSLLA 1489
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + GND DG SG DT +++ DA D + +
Sbjct: 1490 GTGADTLDGGEGNDTLDGGSGNDTMAGGTGDDALT-GGSGGDVLIGDAGNDALDGGTGTD 1548
Query: 343 RLRFADQCIDSVNVKQRSIL 362
+ + L
Sbjct: 1549 TVDYGLATAGVSVSLSMPGL 1568
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 222 IYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ D G G D D G ++L S S +E+V GS+ D +
Sbjct: 1396 LMDGGTGYDTADYAAASGA-VTVNL---SLSGAAQVTGGAGTDTLVSVENVTGSAFADNL 1451
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G+++ N GND D D + + D S
Sbjct: 1452 TGSTSANQIDGGDGNDTIDAGGSSDVVNGQLGDDSL-LAGTGADTLDGGEGNDTLDGGSG 1510
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + +L A + L G D +
Sbjct: 1511 NDTMAGGTGDDALTGGSGGDVLIGDAGNDALDGGTGTDTVD 1551
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 22/183 (12%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ Y ++ + + +GG D++ ++ ++G +
Sbjct: 868 SGGAGNDTYYVDSVADRTTELL----AGGSDMVVASVDW--------------TLGSNVE 909
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+T+ + G++ ++V++G AN+ + GND+ DG +G D Y I
Sbjct: 910 NLTLVGGARV--GRGNALDNVLVGTVANDSLYGGDGNDLLDGGAGGDRLSGGLGDDTYLI 967
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++V A ++ + + A + + L L G D
Sbjct: 968 -DSSTDVVVESAGAGYDTVIATFDYVLQA-NVEVARLLGSGHTLTGNTGNNILEGGSGDD 1025
Query: 379 VFE 381
V
Sbjct: 1026 VLN 1028
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 7/124 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E +V + GN +N+ ++G+DV DG G D+ A + Y + +
Sbjct: 828 VERLVLAGAARHATGNGLDNLITGTTGHDVLDGGLGADSLSGGAGNDTYYVDSVADRTTE 887
Query: 328 YDANEHKQ-------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A S+VE L ++L T + + L G D+
Sbjct: 888 LLAGGSDMVVASVDWTLGSNVENLTLVGGARVGRGNALDNVLVGTVANDSLYGGDGNDLL 947
Query: 381 ESMK 384
+
Sbjct: 948 DGGA 951
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 24/197 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLD--------LTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + T+ + G D L+ + G +D + + + G +
Sbjct: 594 GWGLAGTGNSLANTLTGTDGGDALNGMAGGDTMVGGAGNDSYSVDTVNDVVTEVAGGGTD 653
Query: 260 MTIAQ-----HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
A +E++V + GNS N+ ++ D DG +G D
Sbjct: 654 TVYASRSWVLGADLENLVLTGAARAGTGNSLANILTGTAFADTLDGGAGSDQLIGGLGDD 713
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS---------DVERLRFADQCIDSVNVKQRSILEYT 365
YK+ A +V + + D ++ ++E LR + + L T
Sbjct: 714 SYKVDTI--ADVVIEMSGEGLDVVTTTVDYTLGANIEVLRLSGAARRGTGNALANSLFGT 771
Query: 366 ASYEDLIQVIGQDVFES 382
S + L G D
Sbjct: 772 TSSDVLDGGGGADSLTG 788
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 84/286 (29%), Gaps = 85/286 (29%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+Y ++ Q D T D L GG + D + +SI ++ N T+A
Sbjct: 481 VYANDLWQPDLNIYGTQ-----SDDLMTAGYGGTRKIDD----TANSIYAFDGNDTLAAG 531
Query: 266 TVIESVVGSSGNDVVIGNSAN--------------------------------------- 286
+ V G G D + GN+ +
Sbjct: 532 GGNDLVDGGQGADEMAGNAGDDTYYVDDAGDATIEVAGEGLDEVVASVDWTLAANLENLT 591
Query: 287 --------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N + G D +G +G DT A + Y + + +V +
Sbjct: 592 LKGWGLAGTGNSLANTLTGTDGGDALNGMAGGDTMVGGAGNDSYSVDTVND--VVTEVAG 649
Query: 333 HKQDFL---------SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV---- 379
D + +D+E L +IL TA + L G D
Sbjct: 650 GGTDTVYASRSWVLGADLENLVLTGAARAGTGNSLANILTGTAFADTLDGGAGSDQLIGG 709
Query: 380 -------FESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGS 417
+++ EG D+ + Y LG+ ++ + G+
Sbjct: 710 LGDDSYKVDTIADVVIEMSGEGLDVVTTTVDYTLGANIEVLRLSGA 755
>gi|17544968|ref|NP_518370.1| calcium binding hemolysin protein [Ralstonia solanacearum GMI1000]
gi|17427258|emb|CAD13777.1| putative calcium binding hemolysin protein [Ralstonia solanacearum
GMI1000]
Length = 1499
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 80/235 (34%), Gaps = 23/235 (9%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N + +V SYF + +D T D+ AV+ + AP +N+Y
Sbjct: 749 NGTDKVTVQSYFNSDATGPYRIDQVRFADGT--SWDVAAVKTLVQAPTSGT-DNLYGYAS 805
Query: 212 QQKDSP--FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ GG+D L G N + G + N + +
Sbjct: 806 DDTLNGLDGNDTLRGYGGNDTLR--GDAGADN-----------LFGGDGNDMLDGGDDND 852
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-- 327
+ G +G+D ++G S N+ + +GND +G +G D S Y +
Sbjct: 853 YLYGEAGDDSLLGGSGNDNLYGGAGNDTLEGGAGNDYLVGNEGSDTYVFNSGWGQDTIYN 912
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
YD + + D ++ + + +D L ++ + D
Sbjct: 913 YDTSTGRSDVIAFGDGIAASDIVATRSGDDLILSLRNSSDRVTVQSHFNSDATGP 967
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 23/201 (11%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S +V SYF + +D T D+ AV+ + AP +N+Y
Sbjct: 1149 NSSDKVTVQSYFYSDATGPYRIDEVRFADGT--SWDVAAVKTLVQAPTSGA-DNLYGYAS 1205
Query: 212 QQKDSP--FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ GG+D L ++ G + N +I +
Sbjct: 1206 DDTLNGLDGNDTLRGYGGNDTLRG-------------DAGADTLYGGDGNDSIDGGADND 1252
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-- 327
+ G +G+D ++G S N+ + +GND +G +G D S Y +
Sbjct: 1253 YLYGEAGDDHLLGGSGNDTLYGGNGNDTLEGGAGNDYLVGNEGSDTYVFNSGWGQDTIYN 1312
Query: 328 YDANEHKQDFLSDVERLRFAD 348
YD + + D ++ + + +D
Sbjct: 1313 YDTSSGRSDVIAFGDGIAASD 1333
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 18/201 (8%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP--FIQTIYDSGGDDLLDLTLIGGVKNYI 243
D+ AV+ + AP +N+Y + T+ GG+D L
Sbjct: 981 WDVAAVKALVQAPTSGA-DNLYGYASDDTLNGLDGNDTLRGYGGNDTLRG---------- 1029
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G + N +I + + G +G+D ++G S N+ + +GND +G +G
Sbjct: 1030 ---DAGADTLYGGDGNDSIDGGADNDYLYGEAGDDRLLGGSGNDTLYGGNGNDTLEGDAG 1086
Query: 304 LDTFFYYAPSYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
D S Y + YD + + D + + +D
Sbjct: 1087 NDYLVGNEGSDTYVFNSGWGQDTLYNYDTSSGRSDVIEFGTGIAASDIVATRSGDDLILS 1146
Query: 362 LEYTASYEDLIQVIGQDVFES 382
L ++ + D
Sbjct: 1147 LRNSSDKVTVQSYFYSDATGP 1167
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 29/211 (13%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
N G Y ++ + D+ Y S + SDI+A
Sbjct: 1293 NEGSDTYVFNSGWGQDTI------YNYDTSSGRSDVIAFGDGIAASDIIA---------T 1337
Query: 201 SLGNNIYKIEVQQKDSPFIQTIY--DSGG---DDLLDLTLIGGVK-----NYIDLNTESW 250
G+++ D +Q+ + D+ G DL+ + + T
Sbjct: 1338 RSGDDLILSLRNSSDRVTVQSYFYSDATGPYRTDLVRFADGTSWDVAAVKALVLVPTSGA 1397
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ GY + + +++ G GND + G++ + F GNDV DG + D +
Sbjct: 1398 DNLYGYASDDALNGLDGNDTIRGYGGNDTLRGDAGADNLFGGDGNDVLDGGADNDYLYGE 1457
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
A + A + D L V
Sbjct: 1458 AGDDSLQ----GGAGTDTLYGGNGNDTLEGV 1484
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 2/133 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + + G GNDV++G N+ + +GND +G +G D
Sbjct: 635 NLTGTSRPDLLVGTNAADYLYGRDGNDVLVGKEGNDNLYGGAGNDTLEGGAGNDYLVGNE 694
Query: 312 PSYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S Y + YD + D + + D L
Sbjct: 695 GSDTYVFNSGWGQDTIYNYDTTAGRSDVIEFGSGIAATDVIATRSGDDLILSLRNGTDKV 754
Query: 370 DLIQVIGQDVFES 382
+ D
Sbjct: 755 TVQSYFNSDATGP 767
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 66/232 (28%), Gaps = 34/232 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL----------TLIGGVKNYIDLNTES 249
G+ G++ Y +G D+++ G + L +
Sbjct: 692 GNEGSDTYVFNSGWGQDTIYNYDTTAGRSDVIEFGSGIAATDVIATRSGDDLILSLRNGT 751
Query: 250 W---------SSIGG--YEKNMTIAQHTVIESVVG-------SSGNDVVIGNSANNVFFE 291
S G + A T + +SG D + G ++++
Sbjct: 752 DKVTVQSYFNSDATGPYRIDQVRFADGTSWDVAAVKTLVQAPTSGTDNLYGYASDDTLNG 811
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND G G DT A + + + D N++ D + L
Sbjct: 812 LDGNDTLRGYGGNDTLRGDAGADNLFGGDGNDMLDGGDDNDYLYGEAGD-DSLLGGSGND 870
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ LE A + L+ G D + + G + +D+
Sbjct: 871 NLYGGAGNDTLEGGAGNDYLVGNEGSDTYV-----FNSGWGQDTIYNYDTST 917
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 66/231 (28%), Gaps = 34/231 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL----------TLIGGVKNYIDLNTES 249
G+ G++ Y SG D+++ G + L S
Sbjct: 1092 GNEGSDTYVFNSGWGQDTLYNYDTSSGRSDVIEFGTGIAASDIVATRSGDDLILSLRNSS 1151
Query: 250 ---------WSSIGG--YEKNMTIAQHTVIESVVG-------SSGNDVVIGNSANNVFFE 291
+S G + A T + +SG D + G ++++
Sbjct: 1152 DKVTVQSYFYSDATGPYRIDEVRFADGTSWDVAAVKTLVQAPTSGADNLYGYASDDTLNG 1211
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND G G DT A + ++I N++ D + L
Sbjct: 1212 LDGNDTLRGYGGNDTLRGDAGADTLYGGDGNDSIDGGADNDYLYGEAGD-DHLLGGSGND 1270
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
LE A + L+ G D + + G + +D+
Sbjct: 1271 TLYGGNGNDTLEGGAGNDYLVGNEGSDTYV-----FNSGWGQDTIYNYDTS 1316
>gi|83645049|ref|YP_433484.1| cell wall biosynthesis glycosyltransferase [Hahella chejuensis KCTC
2396]
gi|83633092|gb|ABC29059.1| Glycosyltransferase involved in cell wall biogenesis [Hahella
chejuensis KCTC 2396]
Length = 1415
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
R FDS YL +Y D+ +HY+ G KE R P F + Y + D+
Sbjct: 272 RSPLFDSEWYLKNYPDVAE----KGVNPLKHYLAIGWKESRQPGPYFDSEYYRTRYPDI- 326
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
A D P LV H+ GC EGR
Sbjct: 327 -AGLDMPPLV-----HYWLHGCSEGRHPN 349
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLY 488
K R+P F + Y+ ++ D+ + H+ G +E R FDS Y
Sbjct: 268 WKLMRSP-LFDSEWYLKNYPDVAEKGVNP-------LKHYLAIGWKESRQPGPYFDSEYY 319
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
Y D+ + HY HG EGR+P++ +++ E+L
Sbjct: 320 RTRYPDIAGL----DMPPLVHYWLHGCSEGRHPNSLFDMDWDRPEENLAP 365
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D+ + +KH+ G E R FDS Y Y D+ G D
Sbjct: 281 YLKNYPDVAE----KGVNPLKHYLAIGWKESRQPGPYFDSEYYRTRYPDIA---GLDM-P 332
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
HY HG EGR+P++ +++ E+L
Sbjct: 333 PLVHYWLHGCSEGRHPNSLFDMDWDRPEENLA 364
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
R FDS YL +Y D+ +HY+ G KE R P F + Y + D+
Sbjct: 272 RSPLFDSEWYLKNYPDVAEKG----VNPLKHYLAIGWKESRQPGPYFDSEYYRTRYPDI- 326
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPD 570
A D P LV H+ G EGR F+ D
Sbjct: 327 -AGLDMPPLV-----HYWLHGCSEGRHPNSLFDMD 355
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 20/151 (13%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R+P F + Y+ ++ D+ + H+ G++E R F+ + Y T Y
Sbjct: 272 RSP-LFDSEWYLKNYPDVAEKGVNP-------LKHYLAIGWKESRQPGPYFDSEYYRTRY 323
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR------ALGISGMQFKSVMNLSEKSRDKADLSL 630
D+ + HY HG EGR + + +E +R+ A LS
Sbjct: 324 PDIAGL----DMPPLVHYWLHGCSEGRHPNSLFDMDWDRPEENLAPISNEGTRNLAGLST 379
Query: 631 SFDHKKVDLYTDYFGDGNYYDSDLYSMHDIN 661
S D + + + G + + ++N
Sbjct: 380 STDSLLISVIIPTYNRGKLLPEIIAAWREVN 410
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Query: 558 GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMN 617
++ RS F+ + YL +Y D+ +HY+ G KE R G F S
Sbjct: 267 YWKLMRSPLFDSEWYLKNYPDVAEK----GVNPLKHYLAIGWKESRQ---PGPYFDSEYY 319
>gi|166363981|ref|YP_001656254.1| putative peptidase [Microcystis aeruginosa NIES-843]
gi|166086354|dbj|BAG01062.1| putative peptidase [Microcystis aeruginosa NIES-843]
Length = 2534
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 7/182 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G N+ Y + + D+ G D L+ ++L + ++
Sbjct: 2207 GGANNDTYLFDTDLVLGS--DRVIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLT 2264
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+T+A T E+V+G S ND ++GN+ N +GND +G + DT+ + +
Sbjct: 2265 LTLASATAFENVIGGSLNDNIVGNTLANSLSGGAGNDTLNGGANNDTYLF-----DTDLV 2319
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ +I + + + + + V ++ AS VIG +
Sbjct: 2320 LGSDRVIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSL 2379
Query: 380 FE 381
+
Sbjct: 2380 ND 2381
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 3/147 (2%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G N+ Y + + D+ G D L+ ++L + ++
Sbjct: 2304 NGGANNDTYLFDTDLVLGS--DRVIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNL 2361
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+T+A T E+V+G S ND ++GN+ N +GND G G DT
Sbjct: 2362 TLTLASATAFENVIGGSLNDNIVGNTLANSLSGGAGNDNLTGGLGKDTLTGSTGLDTLTY 2421
Query: 319 YRFENAIIV-YDANEHKQDFLSDVERL 344
+++ +D + +++ER+
Sbjct: 2422 NSLGESLLSGFDVIQGYSGTGANLERI 2448
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 6/83 (7%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G + GND G G DT A + Y + S
Sbjct: 2178 LVGTGFADALAGVGGNDTLSGLGGNDTLDGGANNDTYLF------DTDLVLGSDRVIDAS 2231
Query: 340 DVERLRFADQCIDSVNVKQRSIL 362
++ L FA ++N+ S +
Sbjct: 2232 GIDTLNFAATTTKTINLNLGSTV 2254
Score = 38.2 bits (87), Expect = 4.7, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 16/126 (12%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESS-------------GNDVFDGSSGLDTFFYYAPSYL 315
+++ G GND + G N+ + G+D +SG+DT + A +
Sbjct: 2185 DALAGVGGNDTLSGLGGNDTLDGGANNDTYLFDTDLVLGSDRVIDASGIDTLNFAATTTK 2244
Query: 316 YKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + L+ E + + V + L A + L
Sbjct: 2245 TINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLNDNIVGNTLANSLSGGAGNDTLN 2304
Query: 373 QVIGQD 378
D
Sbjct: 2305 GGANND 2310
>gi|307316899|ref|ZP_07596341.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306897521|gb|EFN28265.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 1072
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 3/178 (1%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + I G D +D + + L + +++ + + +
Sbjct: 25 FGGDDFIQGLGGADVINGGAGVDTVDYSEKT-TSVVVTLTGATAATV--FVNGVADDTLS 81
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E+V G SGND + G++ NN+F GNDV DG +G DT Y + +
Sbjct: 82 NVENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADYADKTTSVVVTLMGATPA 141
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N +D +S+ E + + +IL A + L D+
Sbjct: 142 TVFVNGIAEDTISNFENVYGGSGNDILTGDDRSNILRGEAGNDILNGGADDDLLSGGA 199
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 9/169 (5%)
Query: 203 GNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ I + GG D D + + LN +
Sbjct: 338 GDTIIGDAAANAFRGGLGADVLDGGGGSDTADFS-DKVQSVVLALNGA----VDAIAAVG 392
Query: 261 TIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A+ TV IE++ G SGND G++A N F G DV DG G DT Y + +
Sbjct: 393 GTAEDTVRNIENITGGSGNDQFTGDAAANTFRGGLGADVLDGGDGSDTADYGDKTVSVVV 452
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ +D L ++E + +++L+ A
Sbjct: 453 TLAGANPTTAFVDGMAEDSLRNIENIIGGSGNDVLAGDGFQNVLDGGAG 501
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 59/190 (31%), Gaps = 8/190 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ + + K S + GG D LD +Y D ++ G
Sbjct: 253 GTADDTLSGDAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYSDKAAAIAVALNGGN 312
Query: 258 KNMTIAQH------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IE++VG SG D +IG++A N F G DV DG G DT +
Sbjct: 313 PVTVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTADFSD 372
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + +D + ++E + + + L
Sbjct: 373 KVQSVVLALNGAVDAIAAVGGTAEDTVRNIENITGGSGNDQFTGDAAANTFRGGLGADVL 432
Query: 372 IQVIGQDVFE 381
G D +
Sbjct: 433 DGGDGSDTAD 442
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IESV 271
K I G D D + + + G +A+ TV IES+
Sbjct: 570 KGDGGQDVIDGGAGTDTADFSEKTAAVVLALAGAANAIATVG-----GLAEDTVRNIESI 624
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G G DV+ G+ +N +G D DG +G+DT Y + + +
Sbjct: 625 FGGIGADVLTGDGNSNTIRGGAGADSLDGGAGVDTVDYRDKTKSVAVTLDGATPVTVKVG 684
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+D + + E + ++L + L +G+DV +
Sbjct: 685 GVIEDTIRNFENISGGSAGDMLTGDGLANVLVGNDGADTLRGGLGKDVLDG 735
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 50/169 (29%), Gaps = 12/169 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G D D G +++ S + + IE+V G GND +
Sbjct: 806 IDGGAGVDTADYREKTGS---VEVALSGASDSFVFVGGVVEDTIRNIENVFGGKGNDTLT 862
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY---------LYKIYRFENAIIVYDANE 332
G+ N + G D+ G G D A S +
Sbjct: 863 GDGLANTLNGNDGKDLLTGGGGADILDGGAASDTASYRDKTASVSVTLDGATYTTVTVGG 922
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D + +VE + ++L + L G D+F+
Sbjct: 923 AAEDTIRNVENIWGGTGNDSLSGDANANLLSGGGGSDILFGGAGADIFQ 971
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 89/271 (32%), Gaps = 30/271 (11%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL NGG V VD + S + ++ + A+ + + V+
Sbjct: 33 GLGGADVINGGAGVDTVDYSEKTTSVVVTL--------TGATAATVFVNGVADDTLSNVE 84
Query: 193 KIYGAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDL---------TLIGGVK 240
+YG GN+ + Q + G+D D TL+G
Sbjct: 85 NVYG----GSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADYADKTTSVVVTLMGATP 140
Query: 241 NYIDLNT------ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ +N ++ ++ G N + + G +GND++ G + +++ +G
Sbjct: 141 ATVFVNGIAEDTISNFENVYGGSGNDILTGDDRSNILRGEAGNDILNGGADDDLLSGGAG 200
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND DG +G+DTF + + +D + +VE +
Sbjct: 201 NDTADGGTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGTADDTLS 260
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ L + L G D + +
Sbjct: 261 GDAAANKLSGARGNDWLKGGGGADTLDGGED 291
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 21/175 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN-------MTIAQHTV--IESVVGSS 275
G+D D G + DL ++ S + +A+ T+ +E++VG +
Sbjct: 198 GAGNDTADG---GTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGT 254
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK---------IYRFENAII 326
+D + G++A N + GND G G DT S + +
Sbjct: 255 ADDTLSGDAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYSDKAAAIAVALNGGNPV 314
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D ++ +E + + + + L G D +
Sbjct: 315 TVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTAD 369
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 11/158 (6%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
S SF + + I ++ ++G G+ + + + GG
Sbjct: 829 SGASDSFVFVGGVVEDTIRNIENVFGGKGNDTLTGD---GLANTLNGNDGKDLLTGGGGA 885
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV------IESVVGSSGNDVVIG 282
D+LD +Y D ++ G +E++ G +GND + G
Sbjct: 886 DILDGGAASDTASYRDKTASVSVTLDGATYTTVTVGGAAEDTIRNVENIWGGTGNDSLSG 945
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ N+ G+D+ G +G D F + +
Sbjct: 946 DANANLLSGGGGSDILFGGAGADIFQFDFALGSTNVDT 983
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 3/165 (1%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ G D D + T S + + G TI +E+++ SG D
Sbjct: 731 DVLDGGNGVDTADYLEKTDAISVTLNGTASAAVLVGGTAEDTIRG---VENILSGSGADT 787
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G++A+N+F + G D DG +G+DT Y + ++ + +D +
Sbjct: 788 LVGDTASNMFRGALGADFIDGGAGVDTADYREKTGSVEVALSGASDSFVFVGGVVEDTIR 847
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++E + + L + L G D+ +
Sbjct: 848 NIENVFGGKGNDTLTGDGLANTLNGNDGKDLLTGGGGADILDGGA 892
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 40/111 (36%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ +DV+ G ++ G DV +G +G+DT Y + +
Sbjct: 13 LIGTDLDDVISGFGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLTGATAATVFV 72
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D LS+VE + Q ++ + L G D +
Sbjct: 73 NGVADDTLSNVENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTAD 123
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKI 318
IE+V GS+ DV+ G++ N+ SG+D+ DG +G DT + + +
Sbjct: 539 IENVTGSAFADVITGDAQANILLGGSGSDILKGDGGQDVIDGGAGTDTADFSEKTAAVVL 598
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A + +D + ++E + + + A + L G D
Sbjct: 599 ALAGAANAIATVGGLAEDTVRNIESIFGGIGADVLTGDGNSNTIRGGAGADSLDGGAGVD 658
Query: 379 VFE 381
+
Sbjct: 659 TVD 661
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 60/186 (32%), Gaps = 9/186 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ + + G D D G + + + +
Sbjct: 406 TGGSGNDQFTGDAAANTFRGGLGADVLDGGDGSDTADYGDKTVSVVVTLAGANPTTAFVD 465
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
M IE+++G SGNDV+ G+ NV DG +G D Y A + +
Sbjct: 466 GMAEDSLRNIENIIGGSGNDVLAGDGFQNVL---------DGGAGTDMADYSASAKGIAV 516
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+D L ++E + + Q +IL + + L GQD
Sbjct: 517 MLNGANDAKVIVGSAAEDTLRNIENVTGSAFADVITGDAQANILLGGSGSDILKGDGGQD 576
Query: 379 VFESMK 384
V +
Sbjct: 577 VIDGGA 582
>gi|114325422|gb|AAH19135.2| Matrix metallopeptidase 12 [Mus musculus]
Length = 473
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 66/195 (33%), Gaps = 47/195 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + P +D Y Y P + A
Sbjct: 223 ELGHSLGLQHSNN-----PKSIMDPTYR----------YLNPNTFRLSA----------D 257
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YGAP +
Sbjct: 258 DIRNIQSLYGAPVKT 272
>gi|254295497|ref|YP_003061519.1| glycosyl transferase family 2 [Hirschia baltica ATCC 49814]
gi|254044028|gb|ACT60822.1| glycosyl transferase family 2 [Hirschia baltica ATCC 49814]
Length = 1327
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 52/170 (30%), Gaps = 26/170 (15%)
Query: 326 IVYDANEHKQDFLSDV--------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I+ D D + V L Q I Y D +
Sbjct: 456 IIRDIKTFGVDVVRKVLGKNSRIRNTLLITKQAILIRRSGLFDSTYYREQLPD----HQK 511
Query: 378 DVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+ + H+ G G FD Y +Y DLR++ HYI++G EGR
Sbjct: 512 SEMDLIGHYISSGDQSGLKPNKFFDPVFYRQTYHDLRDL----PITTLEHYISNGSHEGR 567
Query: 436 -NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
F + Y HED+ D HF G EGR D
Sbjct: 568 ATSSEFDSGFYRKLHEDIAAIGIDP-------LKHFLQNGQFEGRKAVAD 610
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 18/139 (12%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 537
R FDS Y D HYI+ G + G P+ F + Y ++ DL
Sbjct: 493 RSGLFDSTYYREQLPD----HQKSEMDLIGHYISSGDQSGLKPNKFFDPVFYRQTYHDLR 548
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
DL +H+ + G EGR+ + F+ Y ++D+ G D +H++
Sbjct: 549 -------DLPITTLEHYISNGSHEGRATSSEFDSGFYRKLHEDIA-AIGID---PLKHFL 597
Query: 596 THGMKEGRALGISGMQFKS 614
+G EGR + +S
Sbjct: 598 QNGQFEGRKAVADKLSMES 616
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 47/137 (34%), Gaps = 21/137 (15%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F + Y D + D H+ + G + G FD Y +Y
Sbjct: 492 RRSGLFDSTYYREQLPDHQKSEMD-------LIGHYISSGDQSGLKPNKFFDPVFYRQTY 544
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
DLR++ HYI++G EGR F + Y HED+ D
Sbjct: 545 HDLRDL----PITTLEHYISNGSHEGRATSSEFDSGFYRKLHEDIAAIGIDP-------L 593
Query: 552 DHFSNFGYEEGRSITFN 568
HF G EGR +
Sbjct: 594 KHFLQNGQFEGRKAVAD 610
>gi|291567288|dbj|BAI89560.1| hemolysin-type calcium-binding region protein [Arthrospira platensis
NIES-39]
Length = 1254
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 81/232 (34%), Gaps = 28/232 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
TI+ G+D + D TL GG N + +SI G N +I
Sbjct: 980 NDTLIGGSGNNTIFGGLGNDSIVGGKGDDTLFGGEGNDTIEGSAGDNSIFGGAGNDSIIA 1039
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V GND V G NN+ F SGND G SG DT A S L N
Sbjct: 1040 GPGNDTVFAGPGNDQVYGGDGNNLIFGDSGNDTLYGGSGDDTISGGAGSDLLT-GDSGNN 1098
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ Y D ++D + IL ++E L+ +G
Sbjct: 1099 VFYYLNPGEGVDIITDF----------KDPGNDRFLILSGENNFEGLVPTVGTAAAPLQS 1148
Query: 385 HFYEFGLSEGRDI----------TFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
SEG DI TFD+ L+N GSD G+A Y
Sbjct: 1149 AIISALGSEGTDISGRQLIIFQDTFDNIQ--AVNAALKNQRGSDGGSALILY 1198
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 5/165 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ P ++ G+D++D GG N L E SI G N +I + I S+ G
Sbjct: 849 EGGPGNDSLVGGSGNDVID----GGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFG 904
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D +IG N+ GND G +G DT F R +N + D ++
Sbjct: 905 EGGDDTIIGGDDGNLLSGGVGNDSLTGGTGNDTIFGGDGDDTIITERGDNQLFGDDGDDF 964
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + ++ + + + + ++ G D
Sbjct: 965 IWGGI-GRDLIQGGPGNDTLIGGSGNNTIFGGLGNDSIVGGKGDD 1008
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 14/175 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI+ GDD + + + + G + + I +
Sbjct: 926 NDSLTGGTGNDTIFGGDGDDTI-------------ITERGDNQLFGDDGDDFIWGGIGRD 972
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND +IG S NN F GND G G DT F + + +N+ I
Sbjct: 973 LIQGGPGNDTLIGGSGNNTIFGGLGNDSIVGGKGDDTLFGGEGNDTIEGSAGDNS-IFGG 1031
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + + +++ + + L G D
Sbjct: 1032 AGNDSIIAGPGNDTVFAGPGNDQVYGGDGNNLIFGDSGNDTLYGGSGDDTISGGA 1086
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 19/176 (10%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ G+D + GG + + I G + + +++ G
Sbjct: 378 GDKGNDILWGDDGNDTI----YGGEGDDL---------IFGNDGADLLFGGVGNDTIFGG 424
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--- 331
GND +IG ++ G+D+ G G DT + S + I V +AN
Sbjct: 425 PGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGSDTFAIAEGSGGGSVEEANVIN 484
Query: 332 --EHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDVFESMK 384
D + + L F I + I+ + E L +IG +
Sbjct: 485 DFTGGTDKIGLLGNLTFEQLSITQSEENAGNAIIRNGSDGEFLAVLIGVNSNNLTA 540
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 13/189 (6%)
Query: 200 GSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTES 249
G GN++ + +I+ G+D + L GG I + +
Sbjct: 859 GGSGNDVIDGGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFGEGGDDTIIGGDDGN 918
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N ++ T +++ G G+D +I +N F G+D G G D
Sbjct: 919 L--LSGGVGNDSLTGGTGNDTIFGGDGDDTIITERGDNQLFGDDGDDFIWGGIGRDLIQG 976
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ N I N+ D + L + + + A +
Sbjct: 977 GPGNDTLIGGSGNNTIFGGLGNDSIVGGKGD-DTLFGGEGNDTIEGSAGDNSIFGGAGND 1035
Query: 370 DLIQVIGQD 378
+I G D
Sbjct: 1036 SIIAGPGND 1044
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 14/173 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + I GG+D L + + + G N ++ + +
Sbjct: 818 DDNIVGTALSEYIQGFGGNDTL-------------VGVGGRNILEGGPGNDSLVGGSGND 864
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND ++GN N+ F GND G SG+++ F N +
Sbjct: 865 VIDGGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFGEGGDDTIIGGDDGNLLSGGV 924
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N+ + + + D + + + L + + IG+D+ +
Sbjct: 925 GNDSLTGG-TGNDTIFGGDGDDTIITERGDNQLFGDDGDDFIWGGIGRDLIQG 976
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 9/164 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ GN+ + Q + G+DLL G + N L S+ G
Sbjct: 306 GNQGNDTLDGGPGNDTAYGGQDNDLMIGGDGNDLL----FGNLGNDTLLGGPGADSMYGG 361
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N I + + G GND++ G+ N+ + G+D+ G+ G D F +
Sbjct: 362 DGNDCIRGGVGNDLIFGDKGNDILWGDDGNDTIYGGEGDDLIFGNDGADLLFGGVGND-- 419
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
I+ + Q + L F D++ S
Sbjct: 420 TIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGS 463
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 55/177 (31%), Gaps = 7/177 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS------SIGGYEKNMT 261
Q+ IY SG + +D + + L + +S I G +++
Sbjct: 761 GDRFSQESINTGAIIYTSGRESGVDDLVFRLTDSVATLPQQIFSISVVDDFIQGTDEDDN 820
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + E + G GND ++G N+ GND G SG D + +
Sbjct: 821 IVGTALSEYIQGFGGNDTLVGVGGRNILEGGPGNDSLVGGSGNDVIDGGEGNDTL-LGNE 879
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N I S + L + ++L + L G D
Sbjct: 880 GNDSIFGGPGNDSIIGGSGINSLFGEGGDDTIIGGDDGNLLSGGVGNDSLTGGTGND 936
>gi|332289985|ref|YP_004420837.1| Hemolysin-type calcium-binding repeat protein [Gallibacterium anatis
UMN179]
gi|330432881|gb|AEC17940.1| Hemolysin-type calcium-binding repeat protein [Gallibacterium anatis
UMN179]
Length = 2274
Score = 79.8 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 200 GSLGNNIYKIEVQQKD-SPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ N+ Y + K S T+ D+ GG D++++ + G +DL+ I
Sbjct: 1487 ANNANDTYVYTDEYKYLSKNRYTLQDTDGGFDVVNVAAMNG-NMLVDLHAG----IADLN 1541
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ + + + IE V+ GND ++GN+ +N+ G+D +G++G DT + +
Sbjct: 1542 GNILLIKDSQIEGVISGDGNDHLVGNALDNLLIGGRGDDQLEGAAGNDTLYGAQGNDTLT 1601
Query: 318 IYRFENAIIV---YDANEHKQDFLSDVERLRFAD 348
+ +V + + DF V+RL A+
Sbjct: 1602 GGDGFDTFVVNKNANTTDTITDFKVGVDRLILAE 1635
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV---KNYIDLNTESWSS--I 253
G G++ S F++ G+D+L ++ +N D + + +
Sbjct: 730 NGGRGDDF--FYSSGNSSVFVR---GGDGNDMLLGSIANDALAGENGDDFISGNAGDDVL 784
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G+ N + + + G S +D + G + ++ SG+D DG SG DT +
Sbjct: 785 RGHRGNDVLFGDRGNDLIYGGSDDDKLYGGAGDDALVGDSGDDFIDGGSGDDTAEFSGKF 844
Query: 314 YLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFAD 348
Y+I + E I++ D DFL +VE+ F D
Sbjct: 845 EEYEITKLEGGILIKDKVQGRDGSDFLINVEKAAFTD 881
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 55/149 (36%), Gaps = 6/149 (4%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG + + + V + I+ G D L GG+ N DL S G
Sbjct: 1694 YGFASHTSETALPDVGVAYWGTAGDNRIFGGEGADTL----YGGMGN--DLLVGEHQSNG 1747
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + + + ++G G+D++ G +++ +GND G +G D+ +
Sbjct: 1748 QTGGNDLLYGNEGNDHILGGGGHDILNGGDGDDILEGGAGNDTLHGGAGSDSLSGGDGND 1807
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + A + L+ VE
Sbjct: 1808 VIYLEGDDAARGHQNKYYATNQTLTGVEI 1836
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 15/172 (8%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ------TIYDSGGDDLL--DLTL 235
+ +++ +Q + G+ GN + V + + + G+D D TL
Sbjct: 2015 LANNVEELQLLGGSAINGTGNRLNNRIVGNSGNNVLDGGLGDDVLIGGEGNDTYLVDSTL 2074
Query: 236 IGGV---KNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ +DL S S ++ +N+ + I S G+S N+ ++GN +N
Sbjct: 2075 DTVIEKFNQGVDLVRSSVSFTLSDNIENLELVGEQHI-SGNGNSVNNKLLGNQGHNRLMG 2133
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+GND G G D F + + R + ++ E D L E
Sbjct: 2134 YAGNDTLQGRKGNDILFGGQGNDTFVFARGDGIDVI--MEEQGNDTLRFTEV 2183
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 7/125 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + GND ++G++ NN G+D F +G D I+ + IV
Sbjct: 650 VQHIEAGGGNDNLVGDAQNNWLVGGGGSDTFFAGAGDDVLIIDGDDKAENIHGGDGNDIV 709
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
L I+ N + Y++ + G +
Sbjct: 710 QVVGNKGV-------SLDLGAAEIEVANGGRGDDFFYSSGNSSVFVRGGDGNDMLLGSIA 762
Query: 388 EFGLS 392
L+
Sbjct: 763 NDALA 767
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 54/166 (32%), Gaps = 12/166 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI------ESVVGSS 275
+ D G + L YI L S + I TV E+ G S
Sbjct: 1899 VIDGGYITRVWLGKPSESTQYISLYNVRISQLKQSH---FIEPATVNSLPRLQETFNGGS 1955
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + GN+ N F +G D G G D + + K+ + +
Sbjct: 1956 GNDTLQGNAVGNYFDGKAGADTMIGLEGDDVYVVD--NSGDKVIEANESGYDIVKSTISY 2013
Query: 336 DFLSDVERLRFADQCIDS-VNVKQRSILEYTASYEDLIQVIGQDVF 380
++VE L+ + + + + + L +G DV
Sbjct: 2014 QLANNVEELQLLGGSAINGTGNRLNNRIVGNSGNNVLDGGLGDDVL 2059
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 53/173 (30%), Gaps = 24/173 (13%)
Query: 222 IYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA---QHTVIESVV 272
+ GG D D+ +I G +++ + I N ++ IE
Sbjct: 671 LVGGGGSDTFFAGAGDDVLIIDGDDKAENIHGGDGNDIVQVVGNKGVSLDLGAAEIEVAN 730
Query: 273 GSSGNDVVI--GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G G+D GNS+ GND+ GS D + NA
Sbjct: 731 GGRGDDFFYSSGNSSV-FVRGGDGNDMLLGSIANDALAGENGDD----FISGNAGDDVLR 785
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQDVFES 382
D L F D+ D + Y + +D L+ G D +
Sbjct: 786 GHRGNDVL-------FGDRGNDLIYGGSDDDKLYGGAGDDALVGDSGDDFIDG 831
>gi|332561196|ref|ZP_08415514.1| putative outer membrane adhesin like proteiin [Rhodobacter
sphaeroides WS8N]
gi|332274994|gb|EGJ20310.1| putative outer membrane adhesin like proteiin [Rhodobacter
sphaeroides WS8N]
Length = 2633
Score = 79.8 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 2/166 (1%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ TL+GG N + G E N ++ + + G G+D+V+G N+
Sbjct: 2106 FNDTLMGGAGNDSLYGNGDDDRLYGNEGNDSLYGEEGNDWLHGGQGDDLVVGGDGNDTLA 2165
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND G +G DT Y + + + + D L+ +E L ++
Sbjct: 2166 GGLGNDTLQGGAGNDTASYETATEGVTVSLVLQGEGQFVNAQEGNDLLTSIENLTGSNHG 2225
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
+ + ++L A + L+ G D + + ++ + G
Sbjct: 2226 DTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATG 2271
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N ++ + +++VG +GND + G N++ +G+D +G G D
Sbjct: 2473 IFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGSDTLNGGVGDDVLVGGQG 2532
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE----RLRFADQCIDSVNVKQRSI 361
L + + + D ++D E ++ ADQ + ++ + ++
Sbjct: 2533 FDLLTGGTGADTFVFGSLDSADADRITDFEQGVDQIVIADQLMWALENAELNL 2585
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 53/178 (29%), Gaps = 12/178 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + + E N + T IE
Sbjct: 2161 NDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLVLQGEGQFVNAQEGNDLL---TSIE 2217
Query: 270 SVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ GS+ D +IG+ +NV +GND G +G D Y A + +
Sbjct: 2218 NLTGSNHGDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNL 2277
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D LS +E + + +I+ + G D
Sbjct: 2278 ARDGQAQNIGADQGTDVLSSIEGVIGSAFNDILSGSAVANIIFGGDGADLATGGAGND 2335
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 40/190 (21%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S I+ G DL G N TI
Sbjct: 2306 FNDILSGSAVANIIFGGDGADL----------------------ATGGAGNDTILGGAGS 2343
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------------------YY 310
+S+ G+ G+D++ G+ N+ GND G G DT +
Sbjct: 2344 DSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDTVEFQ 2403
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + E D L +E + + + ++++ +A +
Sbjct: 2404 TATAGVTVDLSLQGQAQRISAEEGMDTLFSIENILGSRYDDRLLGDAGSNLIDGSAGNDT 2463
Query: 371 LIQVIGQDVF 380
+ G+D+
Sbjct: 2464 AMGQAGEDLI 2473
>gi|78776444|ref|YP_392759.1| hemolysin-type calcium-binding region [Sulfurimonas denitrificans
DSM 1251]
gi|78496984|gb|ABB43524.1| Hemolysin-type calcium-binding region [Sulfurimonas denitrificans
DSM 1251]
Length = 768
Score = 79.8 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DLT+ GG I +I E + + ++V + G+D + G + N+ F
Sbjct: 523 DLTIRGGEGKNILFTGAGHQNIMLGEDDDELYAGDGDDTVGSAGGDDRIFGEAGNDTIFG 582
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRFADQC 350
GND+ G SG D Y Y I R E V +N ++ D + + E ++FAD
Sbjct: 583 GEGNDMLHGGSGTDVATYSGNIAEYIITRDEGKTYVALASNPNEIDTIINTETIKFADGN 642
Query: 351 IDSVNV 356
N
Sbjct: 643 YTIENS 648
>gi|126463941|ref|YP_001045054.1| putative outer membrane adhesin like proteiin [Rhodobacter
sphaeroides ATCC 17029]
gi|126105752|gb|ABN78282.1| putative outer membrane adhesin like proteiin [Rhodobacter
sphaeroides ATCC 17029]
Length = 2678
Score = 79.8 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 2/166 (1%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ TL+GG N + G E N ++ + + G G+D+V+G N+
Sbjct: 2151 FNDTLMGGAGNDSLYGNGDDDRLYGNEGNDSLYGEEGNDWLHGGQGDDLVVGGDGNDTLA 2210
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND G +G DT Y + + + + D L+ +E L ++
Sbjct: 2211 GGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEGQFVNAQEGNDLLTSIENLTGSNHD 2270
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
+ + ++L A + L+ G D + + ++ + G
Sbjct: 2271 DTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATG 2316
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N ++ + +++VG +GND + G N++ +GND +G G D
Sbjct: 2518 IFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGNDTLNGGVGDDVLVGGQG 2577
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE----RLRFADQCIDSVNVKQRSI 361
L + + + D ++D E ++ ADQ + ++ + ++
Sbjct: 2578 FDLLTGGTGADTFVFGSLDSADADRITDFEQGVDQIVIADQLMWALENAELNL 2630
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 12/178 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + E N + T IE
Sbjct: 2206 NDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEGQFVNAQEGNDLL---TSIE 2262
Query: 270 SVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ GS+ +D +IG+ +NV +GND G +G D Y A + +
Sbjct: 2263 NLTGSNHDDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNL 2322
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D LS +E + + +++ + G D
Sbjct: 2323 ARDGQAQNIGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFGGDGADLATGGAGND 2380
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 62/205 (30%), Gaps = 14/205 (6%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ G+D+ D G +IG + + + IE V+GS
Sbjct: 2293 GGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQAQNIGADQGTDVL---SSIEGVIGS 2349
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ ND++ G++ N+ F G D+ G +G DT A S + N +
Sbjct: 2350 AFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAGSDSL----YGNLGDDLLFGDVG 2405
Query: 335 QDFLSDVE-----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM--KHFY 387
D++ + F D + + +
Sbjct: 2406 NDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDTVEFQTATAGVTVDLSLQGQAQ 2465
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLR 412
EG D F LGS D R
Sbjct: 2466 RISAEEGTDTLFSIENILGSRYDDR 2490
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 40/190 (21%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S I+ G DL G N TI
Sbjct: 2351 FNDILSGSAVANLIFGGDGADL----------------------ATGGAGNDTILGGAGS 2388
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------------------YY 310
+S+ G+ G+D++ G+ N+ GND G G DT +
Sbjct: 2389 DSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDTVEFQ 2448
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + E D L +E + + + ++++ +A +
Sbjct: 2449 TATAGVTVDLSLQGQAQRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLIDGSAGNDT 2508
Query: 371 LIQVIGQDVF 380
+ G+D+
Sbjct: 2509 AMGQAGEDLI 2518
>gi|145219250|ref|YP_001129959.1| hypothetical protein Cvib_0435 [Prosthecochloris vibrioformis DSM
265]
gi|145205414|gb|ABP36457.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
Length = 7428
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 50/111 (45%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I + + ++V G +G+D + G N+ +GNDV DG +GL+T + +
Sbjct: 2594 NIDALADDDVVYAAAGDDTVSGGTGDDTLYGEGGNDTLTGGAGNDVIDGGTGLNTVNFSS 2653
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y I + + + + D +++V+ L F+D+ + V +
Sbjct: 2654 SYASYTIGEQGDTVSLSVSGPDGTDVVTNVDILHFSDKDVYVVGHGGYATF 2704
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 21/190 (11%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--- 253
A +L ++ + + T+ DS G +D + G L ++S I
Sbjct: 3129 ATSTTLALDLDLSALTDDGEDYSVTLADSLGTVTIDGAELVGSTGLNTLKGSAYSDIIRG 3188
Query: 254 -------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G + + + + G G+D+++G + + + +G+DVF+G +G D
Sbjct: 3189 GDGEDALYGQSGDDILYGEEGNDQIFGGEGDDLILGGTGVDAAYGDAGDDVFEGGAGDDF 3248
Query: 307 FFYYAPSYLYKIYRFENAIIVYDAN-----------EHKQDFLSDVERLRFADQCIDSVN 355
F A S + + DA D VE + S
Sbjct: 3249 FSGGAGSDTAIVATGSTVSLTGDARFDELASVVVTGSEGTDTYEGVETINVGGTVSVSGT 3308
Query: 356 VKQRSILEYT 365
L T
Sbjct: 3309 AAAGDGLSTT 3318
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 7/138 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDD-LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G + EV +S +Q D+ D LD T + N D + + G N T
Sbjct: 2105 GQTVKADEVTGINSYTLQNDLDALSIDASLDTTGVNLTGNDED------NELTGGSGNDT 2158
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I ++++G+ GND + G +V +G+D G SG D + ++
Sbjct: 2159 ITGDIGEDTLIGNDGNDELDGGDEADVLEGGTGDDTLIGGSGADQLDGGSGDDEFEYNAG 2218
Query: 322 ENAIIVYDANEHKQDFLS 339
D ++
Sbjct: 2219 AEVGSDTIIGGSGDDTVT 2236
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G +++ + + +++ G G D +IGN N+ DV +G +G DT +
Sbjct: 2140 NLTGNDEDNELTGGSGNDTITGDIGEDTLIGNDGNDELDGGDEADVLEGGTGDDTLIGGS 2199
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ ++ E D +
Sbjct: 2200 GADQLDGGSGDDEFEYNAGAEVGSDTIIG 2228
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 36/100 (36%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D D GG+ + + IGG + + + + + G +G+D + G ++
Sbjct: 6860 NDPNDAIEFGGIDSNLAELASGDVHIGGSDADNVFLLGSGDDYIDGGAGDDYLRGADGSD 6919
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G+D G G D + + + + +
Sbjct: 6920 YIIGGEGDDYLFGGDGDDLLYGGSGTDGSDFISGGDGLDT 6959
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 26/66 (39%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I + + G+ G+D +IG ++ F G+D+ G SG D + +
Sbjct: 6897 GSGDDYIDGGAGDDYLRGADGSDYIIGGEGDDYLFGGDGDDLLYGGSGTDGSDFISGGDG 6956
Query: 316 YKIYRF 321
F
Sbjct: 6957 LDTAVF 6962
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 66/210 (31%), Gaps = 24/210 (11%)
Query: 206 IYKIEVQQKDSPFIQT-----IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
Y ++ D T + L LT G V N+++ ++ +
Sbjct: 2845 TYGVDAFVGDGAISLTKSQIIAFSEDASTTL-LTPNGDVTQIGSSNSDTLTAFLPSDTGY 2903
Query: 261 TIAQHTVIESVVGS-----SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++A TV + V G SGND + G++ + +G D G SG D A S L
Sbjct: 2904 SLA--TVNDEVSGQIIDGLSGNDRISGSTYTDKLIGGTGQDYLIGGSGDDILVGGADSDL 2961
Query: 316 YKIYRF--------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + + + D VE LR+ + L +
Sbjct: 2962 YYVSTGDVVVELNVGGSSDEVRTDLGSYDLTEYVEILRYTGTGDFTGTGNAEDNLIFGGE 3021
Query: 368 YED-LIQVIGQDV--FESMKHFYEFGLSEG 394
+D L G D + G E
Sbjct: 3022 GDDTLSGAAGSDTLFGGVGADTLDGGAGED 3051
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G G+D + G + ++ F G D DG +G D F Y +
Sbjct: 3017 IFGGEGDDTLSGAAGSDTLFGGVGADTLDGGAGEDLFIVGTDYRSGSYYSGATEMT-STV 3075
Query: 331 NEHKQDFLSD 340
+++ D L
Sbjct: 3076 DDYLLDTLIG 3085
Score = 44.7 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 5/111 (4%)
Query: 252 SIGGYEKNMT----IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ GGYE ++ + T ++++GS G D+V G ++ D DG G D +
Sbjct: 3889 NGGGYETQLSDPNYVLGSTGADTIIGSDGQDIVFGRDGDDNITGGIAADTLDGGEGDDNY 3948
Query: 308 FYY-APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ D+ D + E A +
Sbjct: 3949 YITPFVFNADDENGVGYEFTTNDSISDSGDTVDLDEVHIIAGSVAGNDGGT 3999
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ +N+ F G+D G++G DT F + E+ IV + E
Sbjct: 3011 NAEDNLIFGGEGDDTLSGAAGSDTLFGGVGADTLDGGAGEDLFIVGTDYRSGSYYSGATE 3070
Query: 343 RLRFADQCI--DSVNVKQRSILEYTASYE 369
D + + L++ +Y+
Sbjct: 3071 MTSTVDDYLLDTLIGGAGTDTLQFQGTYD 3099
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 20/55 (36%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ G SG+D + + SGND+ G D + + +++
Sbjct: 7238 LYGGSGDDFLSAGQGLDWLDGGSGNDLIISLGGDDRILGGSGDDQIVLATYDDTT 7292
Score = 40.9 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 19/149 (12%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ + V + T+Y GDD++ L+ + +Y + G + ++
Sbjct: 7199 DDGTEFGVIDQLDSANYTVYGLEGDDIITLSPDSDMSHY----------LYGGSGDDFLS 7248
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--------DGSSGLDTFFYYAPSYL 315
++ + G SGND++I ++ SG+D G G
Sbjct: 7249 AGQGLDWLDGGSGNDLIISLGGDDRILGGSGDDQIVLATYDDTTGGDGR-VLILLGGGED 7307
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERL 344
I + D D+ + L
Sbjct: 7308 ELITAVLDGAQGIDIEAIVGDYRMGDDSL 7336
Score = 40.9 bits (94), Expect = 0.76, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 22/208 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL--------LDLTLIGGVKNYIDLNT 247
GA + G+ + E TI GDD D + + +L+
Sbjct: 2200 GADQLDGGSGDDEFEYNAGAEVGSDTIIGGSGDDTVTIKAAGTYDFSTLNASSGIENLSI 2259
Query: 248 ESWSSIGGYE-KNMTIAQHTVIESVVGSSGNDV------VIGNSANNV-FFESSGNDVFD 299
E ++ + T + +DV + N + + G+D+F
Sbjct: 2260 EGDAATSRVTIGTKLVDAGTPLSITGDGISHDVEIDAGDLTSNQSIELDATGFEGDDIFS 2319
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G +G+D+ + + + + D L VE L F DS V
Sbjct: 2320 GGAGIDSVTFADSYSAVTLTFNGTGSAQTLTVETAADGSDTLDGVEVLEF---QGDSATV 2376
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMK 384
+ Y + ++ D
Sbjct: 2377 RVVGAGGYDSIGSAVVAADSGDAILMAA 2404
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ ++ + G S N+ G D G+ G D + + + ++ +I
Sbjct: 2140 NLTGNDEDNELTGGSGNDTITGDIGEDTLIGNDGNDELDGGDEADVLEGGTGDDTLIGGS 2199
Query: 330 ANEHKQDFLSDVER 343
+ D E
Sbjct: 2200 GADQLDGGSGDDEF 2213
>gi|221125872|ref|XP_002165203.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 306
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 68/190 (35%), Gaps = 41/190 (21%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLS--FDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
D++ N + ++ LT + D++ + ++ R A WS V L F ETS
Sbjct: 80 DRHGYNGYSKWTKTTLTYSFRNKCEDLS--DGAVRQTIREAFKVWSDVTHLAFTETSGKG 137
Query: 78 DIKFISSNNGYVCTPRYDS-------RYFMEIN---FDKADVWRYGIGKGTILSHNALHE 127
DI +N + +D YF FD+ + W GT L A+HE
Sbjct: 138 DITIGFHHNSHGDNSPFDGPGRVLAHAYFPPEGRLCFDEGERWVIKT-TGTDLFEIAVHE 196
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
IGH LGL H + ++M Y + Y D
Sbjct: 197 IGHILGLEHS-------------------NIQGTIM-YPSYSGYRPNLQLHY------DD 230
Query: 188 IVAVQKIYGA 197
+Q++YG
Sbjct: 231 RRRIQQMYGV 240
>gi|86747929|ref|YP_484425.1| 5'-nucleotidase [Rhodopseudomonas palustris HaA2]
gi|86570957|gb|ABD05514.1| 5'-nucleotidase [Rhodopseudomonas palustris HaA2]
Length = 2667
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 65/194 (33%), Gaps = 12/194 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
GA + G+ + + I TI G D LDL+ G ++L + +
Sbjct: 2391 GADTINGGDGNDVLNGGLGNDLIIAGAGDDTIDGGAGFDTLDLSEATGA-VTLNLVSGTV 2449
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S G + + IES V +GNDV+ G + ++ +GND G +G DT
Sbjct: 2450 SGAGIGTDHFS-----SIESFVFGAGNDVITGGNGDDSLDGGAGNDTITGGNGNDTLSGG 2504
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ N I+ S + + D + + A +
Sbjct: 2505 EGNDAID-GGSGNDIVDGGLGNDTLKGGSGNDVIAAGDGDDNVDAGSGDDNVTGGAGNDT 2563
Query: 371 LIQVIGQDVFESMK 384
L G D+
Sbjct: 2564 LKGGSGADIITGGA 2577
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 16/180 (8%)
Query: 202 LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS- 252
GN++ + TI G+D L + + GG N D+ +
Sbjct: 2469 AGNDVITGGNGDDSLDGGAGNDTITGGNGNDTLSGGEGNDAIDGGSGN--DIVDGGLGND 2526
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N IA ++V SG+D V G + N+ SG D+ G +G D +
Sbjct: 2527 TLKGGSGNDVIAAGDGDDNVDAGSGDDNVTGGAGNDTLKGGSGADIITGGAGNDILTGGS 2586
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ--DFLSDVERL--RFADQCIDSVNVKQRSILEYTAS 367
+ ++ V D D L + FAD + V ++ A
Sbjct: 2587 GADVFVFAAGFGKDTVTDFATTGSSADLLQFSSDMFADFADVMAHTAQVGSSVVVTLDAD 2646
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 4/164 (2%)
Query: 202 LGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGYE 257
G+ + + + + GDD +++ + ++ I L + S
Sbjct: 2268 TGDVTFGDGNDKLGNTGKIVGDVDLGAGDDFVNIWIGSDIQGQILLGDGNDLLISNDWIS 2327
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
NM I + + S GND V+G N+ + ++GND DG +G D F A + +
Sbjct: 2328 TNMEIDGGAGNDEIYTSFGNDTVVGGEGNDRIYANNGNDTIDGGAGDDQLFGQAGNDVID 2387
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ I D N+ L + + A ++
Sbjct: 2388 GGDGADTINGGDGNDVLNGGLGNDLIIAGAGDDTIDGGAGFDTL 2431
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 56/194 (28%), Gaps = 28/194 (14%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N+ ++ IY S G+D + +GG N I N TI
Sbjct: 2323 NDWISTNMEIDGGAGNDEIYTSFGNDTV----VGGEGND---------RIYANNGNDTID 2369
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +GNDV+ G + GNDV +G G D A +
Sbjct: 2370 GGAGDDQLFGQAGNDVIDGGDGADTINGGDGNDVLNGGLGNDLIIAGAGDDTIDGGAGFD 2429
Query: 324 AIIVYDANEH---------------KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + +A D S +E F L+ A
Sbjct: 2430 TLDLSEATGAVTLNLVSGTVSGAGIGTDHFSSIESFVFGAGNDVITGGNGDDSLDGGAGN 2489
Query: 369 EDLIQVIGQDVFES 382
+ + G D
Sbjct: 2490 DTITGGNGNDTLSG 2503
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 11/129 (8%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ +GGDD LD GG + L + + G E + ++ + ++G G+D
Sbjct: 1672 DTLVGNGGDDQLD----GGEGDDTLLGGDGDDQLAGGEGDDSLDGGAGDDILLGGEGDDT 1727
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-------YLYKIYRFENAIIVYDANE 332
++G ++V G D +G +G D F A + ++
Sbjct: 1728 LLGGDGDDVLVGGEGYDTMEGGAGNDEFTAGAGDSVDGGEGDDLIVVSTDDYAPALIDGG 1787
Query: 333 HKQDFLSDV 341
D L +
Sbjct: 1788 DGNDTLKLI 1796
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 8/128 (6%)
Query: 262 IAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I ++ + + G+DV+ G ++ + G+D DG G DT
Sbjct: 1646 ILVGDDDDNALTGALGDDVLTGLGGDDTLVGNGGDDQLDGGEGDDTLLGGDGDDQLAGGE 1705
Query: 321 FENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++++ D L E L D V + +E A ++ G
Sbjct: 1706 GDDSLD----GGAGDDILLGGEGDDTLLGGDGDDVLVGGEGYDTMEGGAGNDEFTAGAGD 1761
Query: 378 DVFESMKH 385
V
Sbjct: 1762 SVDGGEGD 1769
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 42/126 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ + + + G G+D ++G ++ G+D DG +G D
Sbjct: 1665 LTGLGGDDTLVGNGGDDQLDGGEGDDTLLGGDGDDQLAGGEGDDSLDGGAGDDILLGGEG 1724
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ ++ + + + + E A +D ++ LI
Sbjct: 1725 DDTLLGGDGDDVLVGGEGYDTMEGGAGNDEFTAGAGDSVDGGEGDDLIVVSTDDYAPALI 1784
Query: 373 QVIGQD 378
+
Sbjct: 1785 DGGDGN 1790
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G + + ++++G G+D + G ++ +G+D+ G G DT
Sbjct: 1669 GGDDTLVGNGGDDQLDGGEGDDTLLGGDGDDQLAGGEGDDSLDGGAGDDILLGGEGDDTL 1728
Query: 308 FYYAPSYL 315
+
Sbjct: 1729 LGGDGDDV 1736
>gi|319638111|ref|ZP_07992875.1| hypothetical protein HMPREF0604_00498 [Neisseria mucosa C102]
gi|317400756|gb|EFV81413.1| hypothetical protein HMPREF0604_00498 [Neisseria mucosa C102]
Length = 850
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 8/174 (4%)
Query: 198 PKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
++I E + + I+ G+D L G + I+ + S + G
Sbjct: 639 NGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKL---SSGTGDDVINGDAGSDI-LYG 694
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + +++ G +GND ++G + N++ +GND G G D A +
Sbjct: 695 GGGNDHLNGGLDNDTLYGGAGNDTLLGEAGNDILHGGAGNDTLFGGLGDDILRGEAGNDT 754
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
Y R E ++D H + + + +D +++V K + T E
Sbjct: 755 YVFNRGEGHDTIFD--HHGTNAIQFGAGISLSDLSLETVKEKDGTTWNITIRNE 806
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 21/152 (13%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + I + + G+ GND + G S N+ +G+DV +G +G D +
Sbjct: 636 TTFNGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKLSSGTGDDVINGDAGSDILYGG 695
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + D L + IL A +
Sbjct: 696 GGND-------------HLNGGLDNDTLYG------GAGNDTLLGEAGNDILHGGAGNDT 736
Query: 371 LIQVIGQD--VFESMKHFYEFGLSEGRDITFD 400
L +G D E+ Y F EG D FD
Sbjct: 737 LFGGLGDDILRGEAGNDTYVFNRGEGHDTIFD 768
>gi|220926496|ref|YP_002501798.1| hypothetical protein Mnod_6737 [Methylobacterium nodulans ORS 2060]
gi|219951103|gb|ACL61495.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 115
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL +Y D+ G D HY+ G KEGR+P A F Y++++ D+ A
Sbjct: 21 FDPVYYLATYPDVAE-HGCD---PLEHYLKFGWKEGRDPSAQFSTSGYLSANPDVAEAGI 76
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF 480
+ H+ G EGR
Sbjct: 77 NP-------LVHYRLHGLAEGRS 92
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
+ + Y A+Y D+ + + ++H+ +FG EGRD + F + YL + D+
Sbjct: 17 AMGGFDPVYYLATYPDVAE----HGCDPLEHYLKFGWKEGRDPSAQFSTSGYLSANPDVA 72
Query: 413 NVFGSDRGAAARHYITHGVKEGRN 436
G + HY HG+ EGR+
Sbjct: 73 EA-GIN---PLVHYRLHGLAEGRS 92
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL +Y D+ G D HY+ G KEGR+P A F Y++++ D+ A
Sbjct: 20 GFDPVYYLATYPDVAE-HGCD---PLEHYLKFGWKEGRDPSAQFSTSGYLSANPDVAEAG 75
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRS 564
+ H+ G EGRS
Sbjct: 76 INP-------LVHYRLHGLAEGRS 92
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 17/95 (17%)
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNP 569
G G F + Y+A++ D+ D +H+ FG++EGR + F+
Sbjct: 13 RAGWAMG----GFDPVYYLATYPDVAEHGCDP-------LEHYLKFGWKEGRDPSAQFST 61
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
YL++ D+ HY HG+ EGR+
Sbjct: 62 SGYLSANPDVAEA----GINPLVHYRLHGLAEGRS 92
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
+ G F + Y+A++ D+ D +H+ FG +EGR + F + YL
Sbjct: 13 RAGWAMGGFDPVYYLATYPDVAEHGCDP-------LEHYLKFGWKEGRDPSAQFSTSGYL 65
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+ D+ HY HG+ EGR+
Sbjct: 66 SANPDVAEAG----INPLVHYRLHGLAEGRS 92
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 10/64 (15%)
Query: 558 GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMN 617
G+ G F+P YL +Y D+ +HY+ G KEGR QF +
Sbjct: 15 GWAMG---GFDPVYYLATYPDVAE----HGCDPLEHYLKFGWKEGRD---PSAQFSTSGY 64
Query: 618 LSEK 621
LS
Sbjct: 65 LSAN 68
>gi|115840549|ref|XP_793994.2| PREDICTED: similar to Interstitial collagenase precursor (Matrix
metalloproteinase-1) (MMP-1) [Strongylocentrotus
purpuratus]
Length = 290
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 65/196 (33%), Gaps = 52/196 (26%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH---S 77
Q W + Y+ TT +L DI + + A WS V ++TF + +
Sbjct: 67 QRWPKNDLTYRISTYTT-KLPVDIVD------DAVSRAFKLWSDVANITFTKITSGKADI 119
Query: 78 DIKFISSNNG----YVCTPRYDSRYFM------------EINFDKADVWRYGIGKGTILS 121
DI F ++G + + F I+ D+ + W G L
Sbjct: 120 DISFHRGDHGDSRPFDGSGLVLGHAFPPGLITSRPDLIGSIHLDEEENWTANSRSGKNLW 179
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
HEIGHA+GL H +M + P S+
Sbjct: 180 LTVGHEIGHAIGLSHSRVLPA-------------------LMYPWYP-------SYNPSF 213
Query: 182 TPMVSDIVAVQKIYGA 197
T DI VQ +YGA
Sbjct: 214 TLDRDDIEGVQFLYGA 229
>gi|296273027|ref|YP_003655658.1| hemolysin-type calcium-binding region [Arcobacter nitrofigilis DSM
7299]
gi|296097201|gb|ADG93151.1| Hemolysin-type calcium-binding region [Arcobacter nitrofigilis DSM
7299]
Length = 3735
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 198 PKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ I+ +E S I + G D ++ + N I+L + SS G
Sbjct: 3117 NSKNSDITIFGMEGDDTIFASSGIDILDGGEGIDTINFSNSNVGIN-INLENNTLSS--G 3173
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y + TI E++VG++ +D + G++ +N+ GN++ +G+ G+DT +
Sbjct: 3174 YAQGDTI---VNFENIVGTNSDDNITGDTNDNIISALGGNNIINGNDGIDTVVFSGKLLD 3230
Query: 316 YKIYRFENAIIVYDA-----NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
Y Y+ N + +D + + L++VE+++F D + + +Y
Sbjct: 3231 Y--YKNGNIVTNFDGTATVFTDSGINELTNVEKIQFDDYTMYVDGTVNAPFVYEETNYT 3287
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 7/162 (4%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGY 256
S + + + S F I G+D ++ L G + + T I G
Sbjct: 1346 NNYSNDGDTFDSIEGVQGSNFSDAIV---GNDDGNIILSGAGDDRVS--TGILDDIVHGG 1400
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N I + + + SG+D++IG S N++ + G + G G D Y S Y
Sbjct: 1401 SGNDYIKGNEGNDELHAGSGDDILIGGSGNDILYSDEGKNTLIGDEGTDLVVYKGLSSDY 1460
Query: 317 KIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVK 357
+I +N + + + K D L D+E + F D
Sbjct: 1461 EIMFGDNNTLFVKSKDGKTLDTLKDIEEIAFDDAVFTIDYAN 1502
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 10/182 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTE---SWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
++ G D + L L Y + + S G + +E++ G++ +D
Sbjct: 1235 VFAGSGKDNISLGLGTDTVTYEKSESGVHANLSDEGTLGDALGDTYD-GVENLTGTNFDD 1293
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFENAIIVYDANEHKQD 336
+IG+ +N GND+ G G D Y + + + + D
Sbjct: 1294 YLIGDEGDNTLSGLDGNDILRGGEGADKLQGGEGIDLADYSDSTSGAEVNLENNYSNDGD 1353
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEG 394
+E ++ ++ V +I+ A + + I D+ S + + +EG
Sbjct: 1354 TFDSIEGVQGSNFSDAIVGNDDGNIILSGAGDDRVSTGILDDIVHGGSGNDYIKG--NEG 1411
Query: 395 RD 396
D
Sbjct: 1412 ND 1413
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 72/206 (34%), Gaps = 31/206 (15%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS---IGGYEKNMTIAQHTVIESVVGSSGND 278
I D D + I++ S I G + + TI + V+ SGND
Sbjct: 2896 IVDENDIDT----SLSIANTIINIEPRDISGLDYIDGGDLDDTIVSGDKDDIVIVGSGND 2951
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--------NAIIVYDA 330
+V N+ +G D D G DT + + ++ E + +++ D
Sbjct: 2952 LVFAGKGNDFINLGAGQDRVDAGEGNDTIVMDSEDFDNNLFINEIVSGGAGYDTVVIKDD 3011
Query: 331 NEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASY--------EDLIQVIGQDVFE 381
D L+ VE+ + + ++ A +D++ + +D+
Sbjct: 3012 KGVNFDMDLTSVEKFVGGSGNDNVLGSDNADLVYGGAGADAYHTEAGDDIVHIDKEDIQA 3071
Query: 382 SMKHFYEFG-------LSEGRDITFD 400
+ F + G + E RD+ FD
Sbjct: 3072 NSSSFIDTGSGFDTIYIDEARDVEFD 3097
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 62/208 (29%), Gaps = 40/208 (19%)
Query: 203 GNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
GN+ ++ + D+ + + G D + + GV +DL S G N
Sbjct: 2976 GNDTIVMDSEDFDNNLFINEIVSGGAGYDTVVIKDDKGVNFDMDL--TSVEKFVGGSGND 3033
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNV---------------FFESSGNDVFD------ 299
+ + V G +G D + +++ SG D
Sbjct: 3034 NVLGSDNADLVYGGAGADAYHTEAGDDIVHIDKEDIQANSSSFIDTGSGFDTIYIDEARD 3093
Query: 300 --------------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+G D S + + I + D ++ +
Sbjct: 3094 VEFDVGTSNSEKIISGTGNDILKNSKNSDITIFGMEGDDTIFASSGIDILDGGEGIDTIN 3153
Query: 346 FAD-QCIDSVNVKQRSILEYTASYEDLI 372
F++ ++N++ ++ A + ++
Sbjct: 3154 FSNSNVGININLENNTLSSGYAQGDTIV 3181
Score = 37.8 bits (86), Expect = 5.8, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 1/83 (1%)
Query: 259 NMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N++I T I+ S NDV+ +N+ + +SGND
Sbjct: 2775 NLSIETTTENIDDATFSDANDVIYTGGSNDRIYANSGNDTIYSDESNGNINISFNLNSSF 2834
Query: 318 IYRFENAIIVYDANEHKQDFLSD 340
N I+Y +S+
Sbjct: 2835 DSARSNEKIIYKIEPLPTGTISN 2857
>gi|291570127|dbj|BAI92399.1| peptidyl-prolyl cis-trans isomerase [Arthrospira platensis NIES-39]
Length = 443
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 26/161 (16%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GG+DL+ + I V I G + N TI + + G G+D++
Sbjct: 251 VFAGGGNDLVIGSEIADV-------------INGNQGNDTIYGGAGDDLIWGGQGDDLLF 297
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN N++ + GND G +G D F Y N I++ D D L
Sbjct: 298 GNDGNDIINGNRGNDTIYGGAGDD-FIRGGQGDDYLSGDAGNDILIGD---LGADTLVGG 353
Query: 342 E-----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ L AD ID ++ IL++ + D I V+G
Sbjct: 354 QGADTFVLTHADATIDQADL----ILDFNLAEGDRIAVVGD 390
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 45/143 (31%), Gaps = 10/143 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ N + + + + G+ GND + G + +++ + G+D+ G+ G D
Sbjct: 250 GVFAGGGNDLVIGSEIADVINGNQGNDTIYGGAGDDLIWGGQGDDLLFGNDGNDIINGNR 309
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + A + D+LS + L +
Sbjct: 310 GND----TIYGGAGDDFIRGGQGDDYLSG------DAGNDILIGDLGADTLVGGQGADTF 359
Query: 372 IQVIGQDVFESMKHFYEFGLSEG 394
+ + +F L+EG
Sbjct: 360 VLTHADATIDQADLILDFNLAEG 382
>gi|260820268|ref|XP_002605457.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
gi|229290790|gb|EEN61467.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
Length = 548
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 22/171 (12%)
Query: 14 ADHLLRDQYWS-NYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFE 71
+ R + ++ R+K + LT ++ +L+P+ +E R WS V L F
Sbjct: 113 GLQITRSKRYAFAGDYRWKKNDLTYRIWNYTP-DLSPSQVREAIRRGFQVWSDVTPLRFR 171
Query: 72 ET-SIHSDIKFISSN----NGYVCTPRYDS---RYFME---INFDKADVWRYGIGKGTIL 120
ET S ++DI S +GY R + ++ E +FD + W G+ GT L
Sbjct: 172 ETTSSNADINIQFSRFDHRDGYPFDGRGGTLAHAFYPEDGRTHFDDDEQWTDGMYAGTNL 231
Query: 121 SHNALHEIGHALGLMH---PGS-----YNGGYPVYGVDNDYENDSFLTSVM 163
HEIGHALGL H PG+ Y G P + + D M
Sbjct: 232 FIVTAHEIGHALGLAHSSYPGALMAPFYQGYDPDFKLPVDDTRGIQQLYGM 282
>gi|170739580|ref|YP_001768235.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
gi|168193854|gb|ACA15801.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
Length = 1292
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 83/238 (34%), Gaps = 39/238 (16%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------------- 439
G+ + FD Y Y DLR++ D A HY+ HG KE R P
Sbjct: 38 GQSVEFDPDFYSRLYPDLRHLR--DAKALLSHYLVHGRKERRFPTRTAYLAHLFTKHGDL 95
Query: 440 ---FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY-LGSYDDL 495
F Y ++DL + + H+ FG E R +S ++ L
Sbjct: 96 PEGFDPTIYRDLNQDLAALLQEDWEYAA----HYVQFGRVERRRFRRESERGDEAAWPSL 151
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
D AA H H + GR F ++I + D I A AP G F+
Sbjct: 152 VCAEVDDALVAA-HLRRHDLMPGRWQQRFDLAQFIFLNADWIGA---APATRIQGMLLFA 207
Query: 556 NFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
G + + F+P Y + + G +H++ +EG LG +
Sbjct: 208 EQGVDRLAPLNIEDAFDPAFY-RANHPVAASLGDADL--YRHWL----REGVELGFAP 258
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/294 (18%), Positives = 88/294 (29%), Gaps = 53/294 (18%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-------- 398
A + Y+ Y DL + +D + H+ G E R T
Sbjct: 31 AGGSRWLGQSVEFDPDFYSRLYPDLRHL--RDAKALLSHYLVHGRKERRFPTRTAYLAHL 88
Query: 399 ----------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
FD +Y DL + D AA HY+ G E R A+
Sbjct: 89 FTKHGDLPEGFDPTIYRDLNQDLAALLQEDWEYAA-HYVQFGRVERRRFRRESERGDEAA 147
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
L+ A D + + H G + R FD ++ D + R
Sbjct: 148 WPSLVCAEVDDALVAAHLRRHDLMPGRWQQR---FDLAQFIFLNADWIGAAPATRIQGML 204
Query: 509 HYITHGVKEGRNPD---AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ GV + AF Y ++ + + DA H+ G E G +
Sbjct: 205 LFAEQGVDRLAPLNIEDAFDPAFY-RANHPVAASLGDAD-----LYRHWLREGVELGFAP 258
Query: 566 T-----------------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
F+ + Y + L ++ + A H++ HG+ G
Sbjct: 259 NERACTAALIGQGAFPSCFDAEAYRATQAGLADLTRTQLLA---HWLDHGLPGG 309
>gi|17230147|ref|NP_486695.1| hypothetical protein all2655 [Nostoc sp. PCC 7120]
gi|17131748|dbj|BAB74354.1| all2655 [Nostoc sp. PCC 7120]
Length = 3262
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 77/211 (36%), Gaps = 24/211 (11%)
Query: 179 YCATPMVSDIV-AVQKIYGAPKGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLT 234
Y +P I + P G G+NI + + I+ G+D L
Sbjct: 3037 YQVSPDAGSIALTISDTPTNPVGDAGDNILVGDGNNNSLFGNAGNDRIFGGLGNDYL--- 3093
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
GG + DL + G + N + +++G +GND + G + NN+ G
Sbjct: 3094 -FGGADD--DL-------LNGGDGNDALFGGAGNNTLLGGAGNDYLTGGAGNNLLDGGDG 3143
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND+ G +G +T A + + IY ++ + FL+ + D + +
Sbjct: 3144 NDILYGGNGNNTLLGGAGNDI--IYSGSGDDLINGGLGNDTIFLNGGQ-----DTVVVAQ 3196
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+I + S + + G FE +
Sbjct: 3197 GAGIDTINNFQVSLGQKVGLSGGLTFEQLTL 3227
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 54/170 (31%), Gaps = 5/170 (2%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D G +L + ++ + + VG +G+++++G+ NN F
Sbjct: 3018 DGANEGIESLTFNLVDGEQYQVSPDAGSIALTISDTPTNPVGDAGDNILVGDGNNNSLFG 3077
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
++GND G G D F A L +A+ N + + L
Sbjct: 3078 NAGNDRIFGGLGNDYLFGGADDDLLNGGDGNDALFGGAGNNTLLGGAGN-DYLTGGAGNN 3136
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGRDITF 399
IL L+ G D+ S GL G D F
Sbjct: 3137 LLDGGDGNDILYGGNGNNTLLGGAGNDIIYSGSGDDLINGGL--GNDTIF 3184
>gi|16263827|ref|NP_436619.1| putative hemolysin-adenlyate cyclase protein [Sinorhizobium
meliloti 1021]
gi|15139951|emb|CAC48479.1| probable type I secretion target repeat protein [Sinorhizobium
meliloti 1021]
Length = 1072
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 3/178 (1%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + I G D +D + + L + +++ + + +
Sbjct: 25 FGGDDFIQGLGGADVINGGAGVDTVDYSEKT-TSVVVTLTGANAATV--FVNGVADDTLS 81
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E+V G SGND + G++ NN+F GNDV DG +G DT Y + +
Sbjct: 82 NVENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADYADKTTSVVVTLMGATPA 141
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N +D +S+ E + + +IL A + L D+
Sbjct: 142 TVFVNGIAEDTISNFENVYGGSGNDILTGDDRSNILRGEAGNDILNGGADDDLLSGGA 199
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 9/169 (5%)
Query: 203 GNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ I + GG D D + + LN +
Sbjct: 338 GDTIIGDAAANAFRGGLGADVLDGGGGSDTADFS-DKVQSVVLALNGA----VDAIAAVG 392
Query: 261 TIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A+ TV IE++ G SGND G++A N F G DV DG G DT Y + +
Sbjct: 393 GTAEDTVRNIENITGGSGNDQFTGDAAANTFRGGLGADVLDGGDGSDTADYGDKTVSVVV 452
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ +D L ++E + +++L+ A
Sbjct: 453 TLAGANPTTAFVDGMAEDSLRNIENIIGGSGNDVLAGDGFQNVLDGGAG 501
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 59/190 (31%), Gaps = 8/190 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ + + K S + GG D LD +Y D ++ G
Sbjct: 253 GTADDTLSGDAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYSDKAAAIAVALNGGN 312
Query: 258 KNMTIAQH------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IE++VG SG D +IG++A N F G DV DG G DT +
Sbjct: 313 PVTVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTADFSD 372
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + +D + ++E + + + L
Sbjct: 373 KVQSVVLALNGAVDAIAAVGGTAEDTVRNIENITGGSGNDQFTGDAAANTFRGGLGADVL 432
Query: 372 IQVIGQDVFE 381
G D +
Sbjct: 433 DGGDGSDTAD 442
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 7/171 (4%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IESV 271
K I G D D + + + G +A+ TV IES+
Sbjct: 570 KGDGGQDVIDGGAGTDTADFSEKTAAVVLALAGAANAIATVG-----GLAEDTVRNIESI 624
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G G DV+ G+ +N +G D DG +G+DT Y + + +
Sbjct: 625 FGGIGADVLTGDGNSNTIRGGAGADSLDGGAGVDTVDYRDKTKSVAVTLDGATPVTVKVG 684
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+D + + E + ++L + L +G+DV +
Sbjct: 685 GVIEDTIRNFENISGGSAGDMLTGDGLANVLVGNDGADTLRGGLGKDVLDG 735
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 90/271 (33%), Gaps = 30/271 (11%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL NGG V VD + S + ++ + +A+ + + V+
Sbjct: 33 GLGGADVINGGAGVDTVDYSEKTTSVVVTL--------TGANAATVFVNGVADDTLSNVE 84
Query: 193 KIYGAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDL---------TLIGGVK 240
+YG GN+ + Q + G+D D TL+G
Sbjct: 85 NVYG----GSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADYADKTTSVVVTLMGATP 140
Query: 241 NYIDLNT------ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ +N ++ ++ G N + + G +GND++ G + +++ +G
Sbjct: 141 ATVFVNGIAEDTISNFENVYGGSGNDILTGDDRSNILRGEAGNDILNGGADDDLLSGGAG 200
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND DG +G+DTF + + +D + +VE +
Sbjct: 201 NDTADGGTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGTADDTLS 260
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ L + L G D + +
Sbjct: 261 GDAAANKLSGARGNDWLKGGGGADTLDGGED 291
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 50/169 (29%), Gaps = 12/169 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G D D G +++ S + + IE+V G GND +
Sbjct: 806 IDGGAGVDTADYREKTGS---VEVALSGASDSFVFVGGVVEDTIRNIENVFGGKGNDTLT 862
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY---------LYKIYRFENAIIVYDANE 332
G+ N + G D+ G G D A S +
Sbjct: 863 GDGLANTLNGNDGKDLLTGGGGADILDGGAASDTASYRDKTASVSVTLDGATYTTVTVGG 922
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D + +VE + ++L + L G D+F+
Sbjct: 923 AAEDTIRNVENIWGGTGNDSLSGDANANLLSGGGGSDILFGGAGADIFQ 971
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 21/175 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN-------MTIAQHTV--IESVVGSS 275
G+D D G + DL ++ S + +A+ T+ +E++VG +
Sbjct: 198 GAGNDTADG---GTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGT 254
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK---------IYRFENAII 326
+D + G++A N + GND G G DT S + +
Sbjct: 255 ADDTLSGDAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYSDKAAAIAVALNGGNPV 314
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D ++ +E + + + + L G D +
Sbjct: 315 TVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTAD 369
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 11/158 (6%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
S SF + + I ++ ++G G+ + + + GG
Sbjct: 829 SGASDSFVFVGGVVEDTIRNIENVFGGKGNDTLTGD---GLANTLNGNDGKDLLTGGGGA 885
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV------IESVVGSSGNDVVIG 282
D+LD +Y D ++ G +E++ G +GND + G
Sbjct: 886 DILDGGAASDTASYRDKTASVSVTLDGATYTTVTVGGAAEDTIRNVENIWGGTGNDSLSG 945
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ N+ G+D+ G +G D F + +
Sbjct: 946 DANANLLSGGGGSDILFGGAGADIFQFDFALGSTNVDT 983
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 3/165 (1%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ G D D + T S + + G TI +E+++ SG D
Sbjct: 731 DVLDGGNGVDTADYLEKTDAISVTLNGTASAAVLVGGTAEDTIRG---VENILSGSGADT 787
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G++A+N+F + G D DG +G+DT Y + ++ + +D +
Sbjct: 788 LVGDTASNMFRGALGADFIDGGAGVDTADYREKTGSVEVALSGASDSFVFVGGVVEDTIR 847
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++E + + L + L G D+ +
Sbjct: 848 NIENVFGGKGNDTLTGDGLANTLNGNDGKDLLTGGGGADILDGGA 892
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKI 318
IE+V GS+ DV+ G++ N+ SG+D+ DG +G DT + + +
Sbjct: 539 IENVTGSAFADVITGDAQANILLGGSGSDILKGDGGQDVIDGGAGTDTADFSEKTAAVVL 598
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A + +D + ++E + + + A + L G D
Sbjct: 599 ALAGAANAIATVGGLAEDTVRNIESIFGGIGADVLTGDGNSNTIRGGAGADSLDGGAGVD 658
Query: 379 VFE 381
+
Sbjct: 659 TVD 661
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 40/111 (36%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ +DV+ G ++ G DV +G +G+DT Y + +
Sbjct: 13 LIGTDLDDVISGFGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLTGANAATVFV 72
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D LS+VE + Q ++ + L G D +
Sbjct: 73 NGVADDTLSNVENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTAD 123
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 60/186 (32%), Gaps = 9/186 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ + + G D D G + + + +
Sbjct: 406 TGGSGNDQFTGDAAANTFRGGLGADVLDGGDGSDTADYGDKTVSVVVTLAGANPTTAFVD 465
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
M IE+++G SGNDV+ G+ NV DG +G D Y A + +
Sbjct: 466 GMAEDSLRNIENIIGGSGNDVLAGDGFQNVL---------DGGAGTDMADYSASAKGIAV 516
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+D L ++E + + Q +IL + + L GQD
Sbjct: 517 MLNGANDAKVIVGSAAEDTLRNIENVTGSAFADVITGDAQANILLGGSGSDILKGDGGQD 576
Query: 379 VFESMK 384
V +
Sbjct: 577 VIDGGA 582
>gi|288939973|ref|YP_003442213.1| family 2 glycosyl transferase [Allochromatium vinosum DSM 180]
gi|288895345|gb|ADC61181.1| glycosyl transferase family 2 [Allochromatium vinosum DSM 180]
Length = 981
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
FD+ YL D+ A HY+ +G +EGR P A F + Y+ + D+
Sbjct: 48 SPYFDADFYLAQAPDV-AARTYWVENPALHYLLYGGQEGRRPSACFNSGWYLEQYPDVKA 106
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
A + H+ + G EGR
Sbjct: 107 AGMNP-------LLHYLHHGRTEGRLPRP 128
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 46/140 (32%), Gaps = 8/140 (5%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL 411
Y A D+ V H+ +G EGR + F+S YL Y D+
Sbjct: 46 AQSPYFDADFYLAQAPDVAART-YWVENPALHYLLYGGQEGRRPSACFNSGWYLEQYPDV 104
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ HY+ HG EGR P +AL + A L ++ S
Sbjct: 105 KAA----GMNPLLHYLHHGRTEGRLPRPLRALTWHERLWSSEAIEAQRQALQELETLLDS 160
Query: 472 NFGCE-EGRFVTFDSYLYLG 490
+ GC E + +
Sbjct: 161 HEGCAQEASAAAWSLGRWYA 180
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD+ YL D+ A HY+ +G +EGR P A F + Y+ + D+
Sbjct: 48 SPYFDADFYLAQAPDV-AARTYWVENPALHYLLYGGQEGRRPSACFNSGWYLEQYPDVKA 106
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFG 584
A + H+ + G EGR P LT ++ LW+
Sbjct: 107 AGMNP-------LLHYLHHGRTEGRLPR--PLRALTWHERLWSSEA 143
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y+A D+ V+ H+ +G +EGR + FN YL Y D+
Sbjct: 51 FDADFYLAQAPDVAA----RTYWVENPALHYLLYGGQEGRRPSACFNSGWYLEQYPDVKA 106
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
+ HY+ HG EGR
Sbjct: 107 AGMN----PLLHYLHHGRTEGR 124
>gi|157818495|ref|NP_001100269.1| matrix metalloproteinase-27 [Rattus norvegicus]
gi|149020724|gb|EDL78529.1| matrix metalloproteinase 27 (predicted) [Rattus norvegicus]
Length = 511
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 66/194 (34%), Gaps = 51/194 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + AL WSKV L F S +DI
Sbjct: 106 WRKYNLTYRIMNYTPDMTHADV-------DEAIQKALQVWSKVTPLMFTRISKGVADIMI 158
Query: 82 ISSNN----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
G+ P + +FD+ + W G G+G L A
Sbjct: 159 AFRTRVHGWCPRHFDGPLGVLGHAFPPGLGLGG--DTHFDEDETWTTGDGEGFNLFLVAA 216
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H T++M P +D + Y +
Sbjct: 217 HEFGHSLGLSHSSD-------------------QTALM---FPNYVSLDPNK-YPLS--Q 251
Query: 186 SDIVAVQKIYGAPK 199
DI +Q IYG+P
Sbjct: 252 DDINGIQSIYGSPS 265
>gi|281341735|gb|EFB17319.1| hypothetical protein PANDA_011007 [Ailuropoda melanoleuca]
Length = 407
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 70/192 (36%), Gaps = 49/192 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W FI Y+ + T D+ + A WS V L F + S +DI
Sbjct: 78 WKKRFITYRINNYTPDMRPADVDY-------AIQKAFQVWSDVTPLKFRKINSGEADIMI 130
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
++ + +D R + + +FD+A++W KGT L A+HE+
Sbjct: 131 RFASGAHGDFTPFDGRGGVIAHAFGPGPGIGGDTHFDEAEIWTKNY-KGTNLFLVAVHEL 189
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y SY P + A D
Sbjct: 190 GHSLGLSHSSDPKAIMFPTY----------------SYVDPNTFRLSA----------DD 223
Query: 188 IVAVQKIYGAPK 199
+ +Q +YG P+
Sbjct: 224 VRGIQSLYGRPE 235
>gi|157278505|ref|NP_001098354.1| membrane-type matrix metalloproteinase [Oryzias latipes]
gi|46359591|dbj|BAD15298.1| membrane-type matrix metalloproteinase [Oryzias latipes]
Length = 607
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 65/206 (31%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y +T + + R A W KV L FE
Sbjct: 118 YALTGQKWQHKHITYSLKNVTPKVG-------DEKTHDAIRRAFDVWQKVTPLRFEAVPY 170
Query: 76 HS--------DIKFIS------------SNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
+ DI I G++ + + +FD + W G
Sbjct: 171 NELQRTKKDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 230
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 231 PNHDGNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMDT 271
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ PM D++ +QKIYG P
Sbjct: 272 DNFKL-----PM-DDLMGIQKIYGPP 291
>gi|284052786|ref|ZP_06382996.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 635
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 81/232 (34%), Gaps = 28/232 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
TI+ G+D + D TL GG N + +SI G N +I
Sbjct: 361 NDTLIGGSGNNTIFGGLGNDSIVGGKGDDTLFGGEGNDTIEGSAGDNSIFGGAGNDSIIA 420
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V GND V G NN+ F SGND G SG DT A S L N
Sbjct: 421 GPGNDTVFAGPGNDQVYGGDGNNLIFGDSGNDTLYGGSGDDTISGGAGSDLLT-GDSGNN 479
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ Y D ++D + IL ++E L+ +G
Sbjct: 480 VFYYLNPGEGVDIITDF----------KDPGNDRFLILSGENNFEGLVPTVGTAAAPLQS 529
Query: 385 HFYEFGLSEGRDI----------TFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
SEG DI TFD+ L+N GSD G+A Y
Sbjct: 530 AIISALGSEGTDISGRQLIIFQDTFDNIQ--AVNAALKNQRGSDGGSALILY 579
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 5/165 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ P ++ G+D++D GG N L E SI G N +I + I S+ G
Sbjct: 230 EGGPGNDSLVGGSGNDVID----GGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFG 285
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D +IG N+ GND G +G DT F R +N + D ++
Sbjct: 286 EGGDDTIIGGDDGNLLSGGVGNDSLTGGTGNDTIFGGDGDDTIITERGDNQLFGDDGDDF 345
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + ++ + + + + ++ G D
Sbjct: 346 IWGGI-GRDLIQGGPGNDTLIGGSGNNTIFGGLGNDSIVGGKGDD 389
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 14/175 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI+ GDD + + + + G + + I +
Sbjct: 307 NDSLTGGTGNDTIFGGDGDDTI-------------ITERGDNQLFGDDGDDFIWGGIGRD 353
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND +IG S NN F GND G G DT F + + +N+ I
Sbjct: 354 LIQGGPGNDTLIGGSGNNTIFGGLGNDSIVGGKGDDTLFGGEGNDTIEGSAGDNS-IFGG 412
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + + +++ + + L G D
Sbjct: 413 AGNDSIIAGPGNDTVFAGPGNDQVYGGDGNNLIFGDSGNDTLYGGSGDDTISGGA 467
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 13/189 (6%)
Query: 200 GSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTES 249
G GN++ + +I+ G+D + L GG I + +
Sbjct: 240 GGSGNDVIDGGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFGEGGDDTIIGGDDGN 299
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N ++ T +++ G G+D +I +N F G+D G G D
Sbjct: 300 L--LSGGVGNDSLTGGTGNDTIFGGDGDDTIITERGDNQLFGDDGDDFIWGGIGRDLIQG 357
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ N I N+ D + L + + + A +
Sbjct: 358 GPGNDTLIGGSGNNTIFGGLGNDSIVGGKGD-DTLFGGEGNDTIEGSAGDNSIFGGAGND 416
Query: 370 DLIQVIGQD 378
+I G D
Sbjct: 417 SIIAGPGND 425
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 14/173 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + I GG+D L + + + G N ++ + +
Sbjct: 199 DDNIVGTALSEYIQGFGGNDTL-------------VGVGGRNILEGGPGNDSLVGGSGND 245
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND ++GN N+ F GND G SG+++ F N +
Sbjct: 246 VIDGGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSLFGEGGDDTIIGGDDGNLLSGGV 305
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N+ + + + D + + + L + + IG+D+ +
Sbjct: 306 GNDSLTGG-TGNDTIFGGDGDDTIITERGDNQLFGDDGDDFIWGGIGRDLIQG 357
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 55/177 (31%), Gaps = 7/177 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS------SIGGYEKNMT 261
Q+ IY SG + +D + + L + +S I G +++
Sbjct: 142 GDRFSQESINTGAIIYTSGRESGVDDLVFRLTDSVATLPQQIFSISVVDDFIQGTDEDDN 201
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + E + G GND ++G N+ GND G SG D + +
Sbjct: 202 IVGTALSEYIQGFGGNDTLVGVGGRNILEGGPGNDSLVGGSGNDVIDGGEGNDTL-LGNE 260
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N I S + L + ++L + L G D
Sbjct: 261 GNDSIFGGPGNDSIIGGSGINSLFGEGGDDTIIGGDDGNLLSGGVGNDSLTGGTGND 317
>gi|114763232|ref|ZP_01442656.1| hypothetical protein 1100011001311_R2601_04713 [Pelagibaca
bermudensis HTCC2601]
gi|114544030|gb|EAU47040.1| hypothetical protein R2601_04713 [Roseovarius sp. HTCC2601]
Length = 949
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 14/163 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
N+ + + D Q ++D GG D ++ + + IDL+ S S I G + + I
Sbjct: 500 NDEFGTLYEGADLSDRQVLWDKDGGIDAINAAAVT-SDSLIDLSGASASEIAGVK--LKI 556
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSSGLDTFFYYA-P 312
IE+ G G+D ++G +N+ SGND DG +G+DT A
Sbjct: 557 GVPDSIENAFGGDGDDTLVGTDGDNLLSGGRGDDSLHYSSGNDTIDGGAGVDTLRIAALS 616
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ + + ++ +E+ + +VE F D
Sbjct: 617 TEIEGAFADPYTFLMRQGDENALSHVKNVEFFAFQDVTYSVSQ 659
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 50/148 (33%), Gaps = 9/148 (6%)
Query: 199 KGSLGNNI----YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G++G++ Y + TI+ GG D + GG + + +
Sbjct: 738 TGTVGDDQMRGHYGSDDMSGLG-GNDTIFGRGGADRI----HGGAGDDKLVAGGGDDIVY 792
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G I + + G + D +IG+ ++ + GNDV G G D A
Sbjct: 793 GGGGEDIINGGDGNDRIFGGADRDRLIGSVGDDSLYGGEGNDVLRGDDGNDLLVGGAGRD 852
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + + A+ D + D
Sbjct: 853 VMLGGDGADTFVFDLADNASMDVIRDFN 880
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 36/120 (30%), Gaps = 8/120 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRFE 322
+ G+ G+D + G+ ++ GND G G D A I
Sbjct: 735 RTETGTVGDDQMRGHYGSDDMSGLGGNDTIFGRGGADRIHGGAGDDKLVAGGGDDIVYGG 794
Query: 323 NAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + +RL + + +L + L+ G+DV
Sbjct: 795 GGEDIINGGDGNDRIFGGADRDRLIGSVGDDSLYGGEGNDVLRGDDGNDLLVGGAGRDVM 854
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 35/132 (26%), Gaps = 15/132 (11%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-------YAPSYLYKIYRFENAI 325
G+ + G ++ G+D G G DT F + + K+
Sbjct: 730 GTEYDRTETGTVGDDQMRGHYGSDDMSGLGGNDTIFGRGGADRIHGGAGDDKLVAGGGDD 789
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
IVY D F D + Y D++ +
Sbjct: 790 IVYGGGGEDIINGGDGNDRIFGGADRDRLIGSVGDDSLYGGEGNDVL------RGDDGND 843
Query: 386 FYEFGLSEGRDI 397
G GRD+
Sbjct: 844 LLVGGA--GRDV 853
>gi|194212236|ref|XP_001491808.2| PREDICTED: similar to Matrix metalloproteinase-19 precursor
(MMP-19) (Matrix metalloproteinase RASI) (MMP-18) [Equus
caballus]
Length = 547
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 45/196 (22%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W ++++ L + + A+E A WS V LTF+E + +DI
Sbjct: 103 GRWRKKHLKFRILNLPSTLPAHT-------AREALLQAFQYWSDVTPLTFQEVHAGWADI 155
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ ++W +G L A HE+
Sbjct: 156 RLSFHGRQSLYCSKDFDGPGRVLAHADIPELGSVHFDEDELWTERTYRGVNLRIIAAHEL 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H Y + + A + D+
Sbjct: 216 GHALGLGHSR--------------------------YTQALMAPVYAGYRPHFKLHPDDV 249
Query: 189 VAVQKIYGAPKGSLGN 204
+Q +YG +G+
Sbjct: 250 AGIQALYGKKSPGIGD 265
>gi|182677511|ref|YP_001831657.1| hypothetical protein Bind_0516 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633394|gb|ACB94168.1| hypothetical protein Bind_0516 [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 592
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 12/122 (9%)
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
++ + + + E FD YL D+R+ +H++ G
Sbjct: 44 VLAAVTTEKVPPEDLLVDHHHLEIAAPYFDKSYYLAKNTDVRDA----NIDPLKHFLIWG 99
Query: 431 VKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+E RNP +F Y+ ++ D+ A + HF G EGR ++
Sbjct: 100 WRERRNPSLSFDVNFYLQTYPDVAAADVNP-------LIHFIMAGQAEGREARDPLGIWR 152
Query: 490 GS 491
Sbjct: 153 RR 154
Score = 71.3 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 44/134 (32%), Gaps = 15/134 (11%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL----RFADQCIDSVNVKQRSILEY 364
Y A I ++ + E ++ E++ D + Y
Sbjct: 19 YSAAIDATSIEGASIEDVLAVSEEGVLAAVT-TEKVPPEDLLVDHHHLEIAAPYFDKSYY 77
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAA 422
A D+ + +KHF +G E R+ +FD YL +Y D+
Sbjct: 78 LAKNTDVRDA----NIDPLKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAAA----DVNP 129
Query: 423 ARHYITHGVKEGRN 436
H+I G EGR
Sbjct: 130 LIHFIMAGQAEGRE 143
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F Y+A + D+ +A D HF +G+ E R S++F+ + YL +Y D+
Sbjct: 72 FDKSYYLAKNTDVRDANIDP-------LKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAA 124
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVD 638
H+I G EGR + + ++ K + S +++ VD
Sbjct: 125 A----DVNPLIHFIMAGQAEGREAR-DPLGIWRRRLEAARAPSKGGTAASLNNQAVD 176
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 13/83 (15%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y+A + D+ +A D HF +G E R + FD YL +Y D+
Sbjct: 72 FDKSYYLAKNTDVRDANIDP-------LKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAA 124
Query: 498 VFGSDRGAAARHYITHGVKEGRN 520
H+I G EGR
Sbjct: 125 A----DVNPLIHFIMAGQAEGRE 143
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 12/91 (13%)
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
E FD YL D+R+ +H++ G +E RNP F Y+ ++ D
Sbjct: 66 EIAAPYFDKSYYLAKNTDVRDA----NIDPLKHFLIWGWRERRNPSLSFDVNFYLQTYPD 121
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ A + HF G EGR
Sbjct: 122 VAAADVNP-------LIHFIMAGQAEGREAR 145
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Query: 555 SNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
+ + E + F+ YL D+ + +H++ G +E R + F
Sbjct: 60 VDHHHLEIAAPYFDKSYYLAKNTDVRDA----NIDPLKHFLIWGWRERRN---PSLSFDV 112
Query: 615 VMNL 618
L
Sbjct: 113 NFYL 116
>gi|221112764|ref|XP_002163814.1| PREDICTED: similar to matrix metalloproteinase [Hydra
magnipapillata]
Length = 316
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 68/189 (35%), Gaps = 41/189 (21%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLS--FDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
D++ N + ++ LT + D++ + ++ R A WS V L F ETS
Sbjct: 80 DRHGYNGYSKWTKTTLTYSFRNKCEDLS--DGAVRQTIREAFKVWSDVTHLAFTETSGKG 137
Query: 78 DIKFISSNNGYVCTPRYDS-------RYFMEIN---FDKADVWRYGIGKGTILSHNALHE 127
DI +N + +D YF FD+ + W GT L A+HE
Sbjct: 138 DITIGFHHNSHGDNSPFDGPGRVLAHAYFPPEGRLCFDEGERWVIKT-TGTDLFEIAIHE 196
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
IGH LGL H + ++M Y + Y D
Sbjct: 197 IGHILGLEHS-------------------NIQGTIM-YPSYSGYRPNLQLHY------DD 230
Query: 188 IVAVQKIYG 196
+Q++YG
Sbjct: 231 RRRIQQMYG 239
>gi|221369544|ref|YP_002520640.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
KD131]
gi|221162596|gb|ACM03567.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
KD131]
Length = 2626
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 15/179 (8%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
F T+ G+D L GG + + G E N ++ + + G G+
Sbjct: 2099 FNDTLIGGAGNDTL---FGGGDDDR----------LYGNEGNDSLYGEAGNDWLHGGQGD 2145
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+V+G N+ GND G +G DT Y + + + D
Sbjct: 2146 DLVVGGDGNDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLVLQGEGQLVNAQEGYDL 2205
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
L+ +E L + + + ++L A + L+ G D + ++ + G
Sbjct: 2206 LTSIENLTGSRYNDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGEGNDIADYSAATG 2264
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 4/171 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S I+ G DL+ G N L S+ G + + +
Sbjct: 2300 NDILSGSAVANLIFGGDGADLI----TGAAGNDTILGGAGSDSLYGNLGDDLLYGDLGDD 2355
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND V+G + ++ G+DV DG G+DT + + +
Sbjct: 2356 WIHGGQGNDTVVGGAGDDTLAGGLGDDVVDGGEGIDTVEFQTATAGVTVDLSLQGQAQRI 2415
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ E D L +E + + + ++++ +A + ++ G+D+
Sbjct: 2416 SAEEGMDTLFSIENILGSRYDDRLLGDAGSNVIDGSAGNDTVMGQAGEDLI 2466
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 59/179 (32%), Gaps = 15/179 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQH-----TVI 268
T+ G+D L +Y + S + E + AQ T I
Sbjct: 2150 GGDGNDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLVLQGEGQLVNAQEGYDLLTSI 2209
Query: 269 ESVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
E++ GS ND +IG+ +NV +GND G G D Y A + +
Sbjct: 2210 ENLTGSRYNDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGEGNDIADYSAATGGVTVN 2269
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + D LS +E + + +++ + + G D
Sbjct: 2270 LARDGLAQVIGADQGIDVLSSIEGVIGSSSNDILSGSAVANLIFGGDGADLITGAAGND 2328
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N ++ + +++VG +GND + G N++ +GND +G G D
Sbjct: 2466 IFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGNDTLNGGVGDDVLVGGQG 2525
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER----LRFADQCIDSVNVKQRSI 361
L + + + D ++D E+ + ADQ + ++ + ++
Sbjct: 2526 FDLLTGGTGADTFVFGSLDSADADRITDFEQGVDRILIADQLMWALENAELNL 2578
>gi|46204238|ref|ZP_00050284.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 491
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 94/269 (34%), Gaps = 40/269 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------------FK 441
FD YL Y DL V G DR +HY+ HG EGR P A F
Sbjct: 1 FDPDFYLRYYPDL-AVLGDDRKVLRQHYLKHGKGEGRFPSADALVAALEGEGGRLPKDFI 59
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL----RN 497
A Y A +EDL A+ +L +H+ FG EGR + Y Y+ +
Sbjct: 60 AEHYRALYEDL-AGMAEPWELA----EHYLRFGRWEGRAYRAELSAYELEYERMVAREAE 114
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ-AGKDHFSN 556
A + P A+ + L A+ P + + G F
Sbjct: 115 AGRRSAAPPAESFAHLLAAARVLPGAWLDQFVLHEFVLLNEAWLPRPPVSRMEGLMAFLT 174
Query: 557 FGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
G + I+ F+P Y ++ + G+ + +H++ G GR G G +
Sbjct: 175 AGVDRLAPISLRLRFDPSFYRSNNPNAPA--GTSDAELYRHWL--GRGIGR--GEPGSEA 228
Query: 613 KSVMNL--SEKSRDKADLSLSFDHKKVDL 639
++ L E+ D D + +
Sbjct: 229 AALGRLLGDERFPDTFDEATYRSLLPEGV 257
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/303 (17%), Positives = 89/303 (29%), Gaps = 61/303 (20%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------------------FD 400
Y Y DL V+G D +H+ + G EGR + F
Sbjct: 1 FDPDFYLRYYPDL-AVLGDDRKVLRQHYLKHGKGEGRFPSADALVAALEGEGGRLPKDFI 59
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ Y Y+DL + ++ A HY+ G EGR A + Y +E ++ A+A
Sbjct: 60 AEHYRALYEDLAGM--AEPWELAEHYLRFGRWEGRAYRA-ELSAYELEYERMVAREAEAG 116
Query: 461 DLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVF----GSDRGAAARHYITHG 514
R + + L + L + R ++T G
Sbjct: 117 RRSAAPPAESFAHLLAAARVLPGAWLDQFVLHEFVLLNEAWLPRPPVSRMEGLMAFLTAG 176
Query: 515 VKEGRNPDA---FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG----------YEE 561
V F Y S+ A +L + H+ G
Sbjct: 177 VDRLAPISLRLRFDPSFY-RSNNPNAPAGTSDAELYR----HWLGRGIGRGEPGSEAAAL 231
Query: 562 GR-------SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
GR TF+ Y + + R A +H++ + +F++
Sbjct: 232 GRLLGDERFPDTFDEATYRSLLPEGVAPPPQGRLNALRHFLD--------ISFHLWEFEA 283
Query: 615 VMN 617
V
Sbjct: 284 VRQ 286
>gi|331284141|ref|NP_001193569.1| macrophage metalloelastase [Bos taurus]
gi|296480368|gb|DAA22483.1| matrix metallopeptidase 12-like [Bos taurus]
Length = 471
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 67/191 (35%), Gaps = 47/191 (24%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI- 79
W I Y+ + T D+ + + A WS V L F + +DI
Sbjct: 109 AWKKRLITYRINNYTPDLKPEDV-------DDAFQKAFQVWSDVTPLKFRKVHDNEADIM 161
Query: 80 -KFISSNNGYVCT---PRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+F +G + P + + +FD+A+ W G KG L A+HE
Sbjct: 162 IRFAFREHGDAYSFDGPWGILAHAFAPGAGLGGDAHFDEAETWTKGH-KGPNLFLVAVHE 220
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
IGH+LGL H D+ SY +D +T D
Sbjct: 221 IGHSLGLDHSS-----------------DTRAIMFPSYRD-----VDYRRFRLST---DD 255
Query: 188 IVAVQKIYGAP 198
I +Q +YG P
Sbjct: 256 IRGIQSLYGRP 266
>gi|301773298|ref|XP_002922071.1| PREDICTED: macrophage metalloelastase-like [Ailuropoda melanoleuca]
Length = 493
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 70/192 (36%), Gaps = 49/192 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W FI Y+ + T D+ + A WS V L F + S +DI
Sbjct: 133 WKKRFITYRINNYTPDMRPADVDY-------AIQKAFQVWSDVTPLKFRKINSGEADIMI 185
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
++ + +D R + + +FD+A++W KGT L A+HE+
Sbjct: 186 RFASGAHGDFTPFDGRGGVIAHAFGPGPGIGGDTHFDEAEIWTKNY-KGTNLFLVAVHEL 244
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y SY P + A D
Sbjct: 245 GHSLGLSHSSDPKAIMFPTY----------------SYVDPNTFRLSA----------DD 278
Query: 188 IVAVQKIYGAPK 199
+ +Q +YG P+
Sbjct: 279 VRGIQSLYGRPE 290
>gi|242334910|emb|CAB08559.4| C. elegans protein H36L18.1, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 420
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 47/205 (22%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ R+ + + YW I Y+ + R+S + V A W + L
Sbjct: 25 SKSRVKRYSIEGSYWGKSVITYRL-KQPSQRMSLS------QQKAVFARAFATWEEHTRL 77
Query: 69 TFEETSI------HSDIKFISSNN---------GYVCTPRYDSRYFMEINFDKADVWRYG 113
F + DI F + ++ G + + RY +++FD+ ++W
Sbjct: 78 WFVAVDDEDEQKANIDIVFAAGDHEDGEPFDGKGNILAHAFFPRYGGDVHFDEDELWSAN 137
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
KG L A+HEIGH+LGL H S S+M+ F Q +
Sbjct: 138 KTKGVDLYAVAVHEIGHSLGLKHS-------------------SNHLSIMAPFYKQYTGA 178
Query: 174 DASFGYCATPMVSDIVAVQKIYGAP 198
DI AV+++YGAP
Sbjct: 179 ------VMHLHQDDISAVKRLYGAP 197
>gi|321471530|gb|EFX82502.1| hypothetical protein DAPPUDRAFT_48702 [Daphnia pulex]
Length = 225
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 59/156 (37%), Gaps = 27/156 (17%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--- 77
++W + YK T D+ +E+AR A W+ V DL F S
Sbjct: 42 RHWPKKQLTYKIKKYTEDMPKSDV------DREIAR-AFQMWADVTDLAFVHVKNQSADV 94
Query: 78 --DIKFISSNN-------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI F+S + G+ + +FD+ + W G+GT L
Sbjct: 95 DIDILFVSGEHNGEHGSCNRFDGLGHTLAHAAGPIDGGDTHFDEGETWTLDSGQGTNLFQ 154
Query: 123 NALHEIGHALGLMHPGSYNGG--YPVYGVDNDYEND 156
A HE GH+LGL H YP Y D++ D
Sbjct: 155 LATHEFGHSLGLGHTRHVKMAVMYPYYEYQPDFKLD 190
>gi|218886262|ref|YP_002435583.1| Hemolysin-type calcium-binding region [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757216|gb|ACL08115.1| Hemolysin-type calcium-binding region [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 2537
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 74/231 (32%), Gaps = 14/231 (6%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y LG+ K+ T++D + I + +I
Sbjct: 2269 YTYTAHDLGDAADKVTATLTTHVQTGTVFDG--------SDDAHGIGLIVAGSAHGDTIT 2320
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I + + G SGNDV+ G N+V GND DG +G++T + A
Sbjct: 2321 GSSGDDRIHGGAGNDHLYGGSGNDVLHGGDGNDVLHGGDGNDYLDGGAGVNTLYGDAGDD 2380
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++ V D DF L D + + L+++ D +
Sbjct: 2381 TLVVHDTGGGTGVADGYLDNHDFAG----LHGGDGYDTLLVQGEDVTLDFSRIAADTV-- 2434
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
G + + H + D+T L V + A++ H
Sbjct: 2435 TGIEAIDLTAHGAQHVTLSLDDLTSSDTGSLAVVFGETPVLSASTAASSEH 2485
>gi|115667815|ref|XP_001176253.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
gi|115700134|ref|XP_783671.2| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
Length = 598
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 66/200 (33%), Gaps = 50/200 (25%)
Query: 16 HLLRDQYW-SNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEET 73
++ W N + Y LT LN NA + R A W V LTF E
Sbjct: 173 YVTGGIAWPRNVAVTYSFGTLTND--------LNQNAIKNEIRRAFQVWDDVSGLTFREV 224
Query: 74 --SIHSDIKFISSNNGYVCTPRYDSRYFM----------EINFDKADVWRYGIGKGTILS 121
S DI+ + + +D + + + +FD ++ W G GT L
Sbjct: 225 VDSSSVDIRIKFGSYEHGDGISFDGQGGVLAHAFLPRNGDAHFDDSETWTIGTNFGTNLF 284
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYC 180
A HE GH+LGL H ++M Y+ + +
Sbjct: 285 QVAAHEFGHSLGLYHSD-------------------VQAALMYPYYRGYNPNFNLDR--- 322
Query: 181 ATPMVSDIVAVQKIYGAPKG 200
DI + +YG G
Sbjct: 323 -----DDIAGITSLYGRNTG 337
>gi|163853954|ref|YP_001641997.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|163665559|gb|ABY32926.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
Length = 781
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 80/266 (30%), Gaps = 43/266 (16%)
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALG-LMHPGS--------YNGGYPVYGVDNDYE 154
F G HEIGH LG L P + +NG +
Sbjct: 106 FYDPTGVAAAPGNRFDAFTIFQHEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPVV 165
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-DIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D V + +D M + + D+ +Q + ++
Sbjct: 166 LDGARAHV---WGSEDLMDPYLGWGQRSYISDLDLAMLQDKGMPISTERADKMW------ 216
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T + GGDD +D G + + ++++G
Sbjct: 217 -LGNRADTFFAYGGDDWID----------------------GGWGDDKLFGGVGNDTLIG 253
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANE 332
GND + G + ++ +G D +G G+D S Y +Y ++ +
Sbjct: 254 GDGNDALDGGAGDDTLIGGNGGDTLEGGEGIDRAVLTGRSQDYVALYGAAGSLAIKHLGS 313
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQ 358
D L+ +E L F D + +
Sbjct: 314 GNIDTLTSIETLNFDDTVLGMSGLLA 339
>gi|291518071|emb|CBK73292.1| hypothetical protein CIY_03380 [Butyrivibrio fibrisolvens 16/4]
Length = 312
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y +Y D+ G+D HY+ +G+ EGR+ A F Y ++ DL+ AF
Sbjct: 51 VFDAKYYAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVTAF 110
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
Q +H+ G +E R + D+ L
Sbjct: 111 GSN---YQAFINHYVTSGIKENRVASADALL 138
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 14/180 (7%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRN 413
+ Y +Y D++ +G D + H+ G+ EGRD TF+ +Y + DL
Sbjct: 49 ARVFDAKYYAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVT 108
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-------FKALEYIASHEDLINA----FADAPDL 462
FGS+ A HY+T G+KE R A KA+ +A D I + +
Sbjct: 109 AFGSNYQAFINHYVTSGIKENRVASADALLKQGPKAIATLAQQNDQIKSTSNITGNTFAY 168
Query: 463 VQVGKDHFSNFGCE-EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
D G E + + ++ D+ + G Y+ H R+
Sbjct: 169 TAPSADPTVVGGMALEAQQAYQRALDFINGGHDVSEIGLDKAGWTNESYLKHYEAATRDI 228
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F A Y ++ D++ A + P ++ +H+ N G EGR S TFN +Y + DL
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVL---LNHYVNNGIYEGRDASATFNMSVYALANPDLVT 108
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGM 610
FGS+ A HY+T G+KE R +
Sbjct: 109 AFGSNYQAFINHYVTSGIKENRVASADAL 137
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y +Y D+ G+D HY+ +G+ EGR+ A F Y ++ DL+ AF
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVTAFG 111
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNP 569
QA +H+ G +E R + +
Sbjct: 112 SN---YQAFINHYVTSGIKENRVASADA 136
>gi|241205214|ref|YP_002976310.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859104|gb|ACS56771.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 932
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LDL+ G + + S + + N A V + GS G+D++ GN N+
Sbjct: 225 LDLSDELGDLGTL-VRGFSGIDVKTGDGNDEFAGSDVNDIFDGSGGSDLINGNDGNDKLT 283
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND +G +G+DT + Y + +V A D L+DVE RFAD
Sbjct: 284 GGDGNDTINGGAGIDTAAFAGNFAEYSFEIDNGSRVVTSAL-EGTDRLTDVEFARFADGV 342
Query: 351 IDSVNVKQR 359
D
Sbjct: 343 YDFATETFT 351
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 6/175 (3%)
Query: 231 LDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LDL+ +G + ++ID + + + + G+ GND++ GN+ N+
Sbjct: 594 LDLSDELGDLGSFIDGHAFGI-DVKTGSGDDEFTGTDGNDIFDGNGGNDILNGNAGNDKL 652
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D +G G+DT + Y N + + D L+DVE RFAD
Sbjct: 653 TGGAGDDTINGGDGIDTAIFSGNFANYSF-ALNNGDHILTSAGEGTDTLTDVELARFADG 711
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
D + L + + + GL +D D+ Y
Sbjct: 712 VYDFATETFTPKGNAAPTNIQLSKTALSEDTPI---WTTVGLLSAKDADGDALTY 763
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 16/171 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---S 252
G P L N I + I DS + L+ + L+ +DL E S +
Sbjct: 358 GTPLNILDTNGATITKTGAEFEAYDVIRDSEINPLVAVNLVVSDSGAVDLADELGSGSAN 417
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I +++ G G D + G + N++ +GND +G G D
Sbjct: 418 VTGSSGDNAITTGAGNDNINGGDGADTLNGGAGNDLIQGGNGNDTLNGGDGNDHISGDLG 477
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + + D +SD E A + +D +
Sbjct: 478 NDVIR-------------GGAGNDTISDGELFGLASEVVDIDAGDGNDAIT 515
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 66/202 (32%), Gaps = 19/202 (9%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ + +P T+ DS DL D + + T+
Sbjct: 24 DVIRDSETSPSAPVSLTVSDSSAADLADELGLVSANVTV------------SSGGSTVTT 71
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G G D + G ++ + ++GND G G D ++ +
Sbjct: 72 GAGNDNISGGEGADTLSGGGGDDTIYGNAGNDKLIGGDGNDRITDGGFGFVLGPDGSLQS 131
Query: 325 IIVYDANEHKQDFLSDVERLR-----FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
IV D ++ +ER D ++ ++ T +++++ V
Sbjct: 132 EIVDIDGGDGDDLIT-IERFAPLISGTIDGGAGIDTLRASALRGLTIKNVEVLELADFRV 190
Query: 380 FESMKHFYEF-GLSEGRDITFD 400
S F F ++ D F+
Sbjct: 191 SGSSAQFESFDKIARSTDPVFN 212
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 61/205 (29%), Gaps = 38/205 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
S I G+D ++ G LN + + I G N T+
Sbjct: 415 SANVTGSSGDNAITTGAGNDNIN-----GGDGADTLNGGAGNDLIQGGNGNDTLNGGDGN 469
Query: 269 ESVVGSSGNDVVIGNSANNVF---------------FESSGND-------------VFDG 300
+ + G GNDV+ G + N+ GND DG
Sbjct: 470 DHISGDLGNDVIRGGAGNDTISDGELFGLASEVVDIDAGDGNDAITLETFAPMNSGTIDG 529
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G+DT + L +N I+ A + +E D + S
Sbjct: 530 GAGIDTLQISSLQGLT----IKNVEILETAGWSVAGSSAQLESFDKIVWSTDPFGDFRAS 585
Query: 361 ILEYTASYEDLIQVIGQDVFESMKH 385
+ +++ DL +G H
Sbjct: 586 VALTDSAHLDLSDELGDLGSFIDGH 610
>gi|71060081|emb|CAJ18584.1| Mmp12 [Mus musculus]
Length = 462
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 66/195 (33%), Gaps = 47/195 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 100 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 152
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 153 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 211
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + P +D Y Y P + A
Sbjct: 212 ELGHSLGLQHSNN-----PKSIMDPTYR----------YLNPNTFRLSA----------D 246
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YGAP +
Sbjct: 247 DIRNIQSLYGAPVKT 261
>gi|291389397|ref|XP_002711214.1| PREDICTED: matrix metalloproteinase 19 [Oryctolagus cuniculus]
Length = 525
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 63/189 (33%), Gaps = 47/189 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + ++ L + S A+E A WS+V LTF+E + +DI
Sbjct: 102 GRWRKKHLTFRILNLPSTLPSH-------IAREALLQAFRYWSEVAPLTFQEVQAGRADI 154
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ ++W G +G L A HE+
Sbjct: 155 RLSFHGRQSLYCSNAFDGPGRVLAHADIPELGSVHFDEDELWTEGTYRGVNLRIIAAHEL 214
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H PVY Y D
Sbjct: 215 GHALGLGHSRYTKALMAPVYAGYRPYFR---------------------------LHPDD 247
Query: 188 IVAVQKIYG 196
+ +Q +YG
Sbjct: 248 VAGIQALYG 256
>gi|26354416|dbj|BAC40836.1| unnamed protein product [Mus musculus]
Length = 473
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDTHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|261380309|ref|ZP_05984882.1| putative dextranase [Neisseria subflava NJ9703]
gi|284796823|gb|EFC52170.1| putative dextranase [Neisseria subflava NJ9703]
Length = 854
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 8/165 (4%)
Query: 198 PKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
++I E + + I+ G+D L G + I+ + S + G
Sbjct: 639 NGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKLSG---GTGDDVINGDAGSDI-LYG 694
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + +++ G SGND ++G + N++ +GND G G D A +
Sbjct: 695 GGGNDHLNGGLDNDTLYGGSGNDTMLGEAGNDILHGGAGNDTLFGGLGDDILHGEAGNDT 754
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y R E ++D H + + + +D +++VN K +
Sbjct: 755 YVFNRGEGHDTIFD--HHSTNAIQFGAGISLSDLSLETVNEKDGT 797
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 21/152 (13%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + I + + G+ GND + G S N+ +G+DV +G +G D +
Sbjct: 636 TTFNGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKLSGGTGDDVINGDAGSDILYGG 695
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + D L + IL A +
Sbjct: 696 GGND-------------HLNGGLDNDTLYG------GSGNDTMLGEAGNDILHGGAGNDT 736
Query: 371 LIQVIGQDV--FESMKHFYEFGLSEGRDITFD 400
L +G D+ E+ Y F EG D FD
Sbjct: 737 LFGGLGDDILHGEAGNDTYVFNRGEGHDTIFD 768
>gi|327269112|ref|XP_003219339.1| PREDICTED: stromelysin-2-like [Anolis carolinensis]
Length = 470
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 63/211 (29%), Gaps = 51/211 (24%)
Query: 5 KPVYTTERIADHLL--RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP IA++ W + Y T D+ A W
Sbjct: 88 KPRCGVPDIAEYRTFPMSPKWEKKDLTYSIQNYTPDMERADV-------DNAIERAWKMW 140
Query: 63 SKVVDLTFEET---SIHSDIKFISSNNGYV---------CTPRYDSRYFMEINFDKADVW 110
S V LTF S +I F S N+G Y Y +FD+ + W
Sbjct: 141 SDVTPLTFTRVYDGSADIEISFASGNHGDYIPFDGQGGQLAHAYSPAYGGNAHFDEDETW 200
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G L A HE GH+LGL H + +M
Sbjct: 201 M-TSSTGINLFIVAAHEFGHSLGLYHSRELDA-------------------LM------- 233
Query: 171 SMMDASFGYCATPMV--SDIVAVQKIYGAPK 199
FG T + DI +Q +YG P+
Sbjct: 234 -FPTYQFGDPQTLKLHRDDIEGIQHLYGPPE 263
>gi|253996156|ref|YP_003048220.1| von Willebrand factor type A [Methylotenera mobilis JLW8]
gi|253982835|gb|ACT47693.1| von Willebrand factor type A [Methylotenera mobilis JLW8]
Length = 2114
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 97/257 (37%), Gaps = 18/257 (7%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
YF+ ++ Y ++DIV P G+ Y + S T+Y+
Sbjct: 1861 YFIRMQTVGTTDTSYNLVLTLTDIVG-------PMTENGSFEYTVTENGVASSASATVYN 1913
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+ T+ GG + I L + ++ G N + ++++G +G D + G S
Sbjct: 1914 VVGN-----TITGGDGDEILLGGNTNDTLIGGGGNDVLIGGAGNDTLLGGTGADRLEGGS 1968
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N++ +GND+ G +G DT + ++K + D ++D +
Sbjct: 1969 GNDILNGGTGNDILIGGTGNDTLTGGLGADVFKWSLADAGAT----GTPATDVITDFDTT 2024
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG-LSEGRDITFDSYL 403
+D+ +D ++ Q I + + + +++ H G + G + +
Sbjct: 2025 ANSDK-LDLRDLLQGEIGSGVGANLENYLHFEKVGTDTVVHISSNGSFNNGYNPAAEVQT 2083
Query: 404 YLGSYDDLRNVFGSDRG 420
DL + +D+
Sbjct: 2084 ITLQNVDLVGSYANDQQ 2100
>gi|307308175|ref|ZP_07587890.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|306901378|gb|EFN31983.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 1072
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 69/196 (35%), Gaps = 12/196 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + I G D +D + + L + +++ + + +
Sbjct: 25 FGGDDFIQGLGGADVINGGAGVDTVDYSEKT-TSVVVTLTGATAATV--FVNGVADDTLS 81
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E+V G SGND + G++ NN+ GNDV DG +G DT Y + + +
Sbjct: 82 NVENVYGGSGNDTITGDAQNNLIRGGGGNDVLDGGAGNDTADYTDKTTSVVVTLAGATLA 141
Query: 327 VYDANEHKQDFLSDVER---------LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
N +D +S+ E L D+ IL A + L G
Sbjct: 142 TVFVNGIAEDTISNFENVYGGSANDVLTGDDRANILRGEAGDDILNGGADDDLLSGGAGN 201
Query: 378 DVFESMKHFYEFGLSE 393
D + F L E
Sbjct: 202 DTADGGTGIDTFDLRE 217
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 9/169 (5%)
Query: 203 GNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ I + GG D D + + LN +
Sbjct: 338 GDTIIGDAAANAFRGGLGADVLDGGGGSDTADFS-DKVQSVVLALNGA----VDAIAAVG 392
Query: 261 TIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A+ TV IE++ G SGND G++A N F G DV DG G DT Y + +
Sbjct: 393 GTAEDTVRNIENITGGSGNDQFTGDAAANTFRGGLGADVLDGGDGSDTADYGDKTASLVV 452
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ +D L ++E + +++L+ A
Sbjct: 453 TLNGANPATVFVGGNAEDTLRNIENIIGGSGNDVLAGDGFQNVLDGGAG 501
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 59/190 (31%), Gaps = 8/190 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ + + K S + GG D LD +Y D ++ G
Sbjct: 253 GTADDTLGGDAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYSDKAAAIAVALNGGN 312
Query: 258 KNMTIAQH------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IE++VG SG D +IG++A N F G DV DG G DT +
Sbjct: 313 PVTVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTADFSD 372
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + +D + ++E + + + L
Sbjct: 373 KVQSVVLALNGAVDAIAAVGGTAEDTVRNIENITGGSGNDQFTGDAAANTFRGGLGADVL 432
Query: 372 IQVIGQDVFE 381
G D +
Sbjct: 433 DGGDGSDTAD 442
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 7/171 (4%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IESV 271
K + I G D D + + + G +A+ TV IES+
Sbjct: 570 KGAGGQDVIDGGAGSDTADFSDKTAAVVLALAGAANAIATVG-----GLAEDTVRNIESI 624
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +G DV+ G+ +N +G D DG +G DT Y + + ++
Sbjct: 625 FGGAGADVLTGDGNSNTIRGGAGADSLDGGAGADTADYRDKTKSVAVTLDGANPVIVKVG 684
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+D + + E + ++L + L +G+DV +
Sbjct: 685 GVIEDTIRNFENISGGSAGDTLTGDGLANVLAGNDGADTLRGGLGKDVLDG 735
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 48/169 (28%), Gaps = 12/169 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G D D +D+ S + IE+V G GND +
Sbjct: 806 IDGGAGVDTADYREKTAS---VDVTLLGASDSFVFVGGAAEDTIRNIENVFGGKGNDTLT 862
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY---------LYKIYRFENAIIVYDANE 332
G+ N + G D+ G G D A S +
Sbjct: 863 GDGLANTLNGNDGKDLLTGGGGADILDGGAASDTASYRDKTASVSVTLDGATYTTVTVGG 922
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D + +VE + ++L + L G D+F+
Sbjct: 923 VAEDTIRNVENIWGGTGNDSLSGDANANLLSGGGGSDILFGGAGADIFQ 971
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 88/271 (32%), Gaps = 30/271 (11%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL NGG V VD + S + ++ + A+ + + V+
Sbjct: 33 GLGGADVINGGAGVDTVDYSEKTTSVVVTL--------TGATAATVFVNGVADDTLSNVE 84
Query: 193 KIYGAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLT---------LIGGVK 240
+YG GN+ + Q + G+D D T L G
Sbjct: 85 NVYG----GSGNDTITGDAQNNLIRGGGGNDVLDGGAGNDTADYTDKTTSVVVTLAGATL 140
Query: 241 NYIDLNT------ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ +N ++ ++ G N + + G +G+D++ G + +++ +G
Sbjct: 141 ATVFVNGIAEDTISNFENVYGGSANDVLTGDDRANILRGEAGDDILNGGADDDLLSGGAG 200
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND DG +G+DTF + + +D + +VE +
Sbjct: 201 NDTADGGTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGTADDTLG 260
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ L + L G D + +
Sbjct: 261 GDAAANKLSGARGNDWLKGGGGADTLDGGED 291
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 8/193 (4%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GS G+ + + + T+ G D+LD +Y++ ++ G
Sbjct: 700 GSAGDTLTGDGLANVLAGNDGADTLRGGLGKDVLDGGNGVDTADYLEKTDAISVTLNGTA 759
Query: 258 KNMTIAQHTV------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ T +E+ + SG D ++G++A+N+F + G D DG +G+DT Y
Sbjct: 760 SAAVLVGGTAEDTIRGVENFLSGSGADTLVGDAASNMFRGALGADFIDGGAGVDTADYRE 819
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + +D + ++E + + L + L
Sbjct: 820 KTASVDVTLLGASDSFVFVGGAAEDTIRNIENVFGGKGNDTLTGDGLANTLNGNDGKDLL 879
Query: 372 IQVIGQDVFESMK 384
G D+ +
Sbjct: 880 TGGGGADILDGGA 892
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 51/177 (28%), Gaps = 15/177 (8%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV------IESVVG 273
TI G D LD +Y D ++ G + + E++ G
Sbjct: 640 NTIRGGAGADSLDGGAGADTADYRDKTKSVAVTLDGANPVIVKVGGVIEDTIRNFENISG 699
Query: 274 SSGNDVVIG---------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
S D + G N + G DV DG +G+DT Y + + A
Sbjct: 700 GSAGDTLTGDGLANVLAGNDGADTLRGGLGKDVLDGGNGVDTADYLEKTDAISVTLNGTA 759
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D + VE V ++ + + G D +
Sbjct: 760 SAAVLVGGTAEDTIRGVENFLSGSGADTLVGDAASNMFRGALGADFIDGGAGVDTAD 816
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 21/175 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN-------MTIAQHTV--IESVVGSS 275
G+D D G + DL ++ S + +A+ T+ +E++VG +
Sbjct: 198 GAGNDTADG---GTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGT 254
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK---------IYRFENAII 326
+D + G++A N + GND G G DT S + +
Sbjct: 255 ADDTLGGDAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYSDKAAAIAVALNGGNPV 314
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D ++ +E + + + + L G D +
Sbjct: 315 TVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTAD 369
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 11/149 (7%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
SF + I ++ ++G G+ + + + GG D
Sbjct: 830 GASDSFVFVGGAAEDTIRNIENVFGGKGNDTLTGD---GLANTLNGNDGKDLLTGGGGAD 886
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV------IESVVGSSGNDVVIGN 283
+LD +Y D ++ G +E++ G +GND + G+
Sbjct: 887 ILDGGAASDTASYRDKTASVSVTLDGATYTTVTVGGVAEDTIRNVENIWGGTGNDSLSGD 946
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N+ G+D+ G +G D F +
Sbjct: 947 ANANLLSGGGGSDILFGGAGADIFQFDFA 975
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 13/177 (7%)
Query: 215 DSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
Q + D G G D+ D + I + + + IE+V G
Sbjct: 488 AGDGFQNVLDGGAGTDMADYS---ASARGIAVTLNGANDAKVIVGSTAEDTLRNIENVTG 544
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR---------FENA 324
S+ DV+ G++ N+ SG+D+ G+ G D A S A
Sbjct: 545 SAFADVITGDALANILLGGSGSDLLKGAGGQDVIDGGAGSDTADFSDKTAAVVLALAGAA 604
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ +D + ++E + + + A + L G D +
Sbjct: 605 NAIATVGGLAEDTVRNIESIFGGAGADVLTGDGNSNTIRGGAGADSLDGGAGADTAD 661
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 41/111 (36%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ +DV+ G ++ G DV +G +G+DT Y + +
Sbjct: 13 LIGTDLDDVISGFGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLTGATAATVFV 72
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D LS+VE + Q +++ + L G D +
Sbjct: 73 NGVADDTLSNVENVYGGSGNDTITGDAQNNLIRGGGGNDVLDGGAGNDTAD 123
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 61/192 (31%), Gaps = 21/192 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ + + G D+LD +Y D ++ G
Sbjct: 406 TGGSGNDQFTGDAAANTFRGGL------GADVLDGGDGSDTADYGDKTASLVVTLNGANP 459
Query: 259 NMTIAQHTV------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
IE+++G SGNDV+ G+ NV DG +G D Y A
Sbjct: 460 ATVFVGGNAEDTLRNIENIIGGSGNDVLAGDGFQNVL---------DGGAGTDMADYSAS 510
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + +D L ++E + + +IL + + L
Sbjct: 511 ARGIAVTLNGANDAKVIVGSTAEDTLRNIENVTGSAFADVITGDALANILLGGSGSDLLK 570
Query: 373 QVIGQDVFESMK 384
GQDV +
Sbjct: 571 GAGGQDVIDGGA 582
>gi|149030869|gb|EDL85896.1| matrix metallopeptidase 24 [Rattus norvegicus]
Length = 514
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 57/170 (33%), Gaps = 48/170 (28%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--------SDIKFIS------------SNNGYVCT 91
++ R A W KV LTFEE H +DI G++
Sbjct: 33 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 92
Query: 92 PRYDSRYFM-EINFDKADVWRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD + W G G L A+HE+GHALGL H +
Sbjct: 93 AYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSA------ 146
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+M+ F + P D+ +QKIYG P
Sbjct: 147 -------------IMAPFYQYMETHNFKL-----PQ-DDLQGIQKIYGPP 177
>gi|209549794|ref|YP_002281711.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535550|gb|ACI55485.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 928
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LDL+ G + + S + + + A V + GS G+D++ GN ++
Sbjct: 225 LDLSDELGDLGTL-VRGFSGIDVKTGDGDDEFAGSNVNDIFDGSGGSDLINGNDGDDKLT 283
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+GND DG +G+DT + Y + +V D L+DVE RFAD
Sbjct: 284 GGAGNDTIDGGAGIDTAAFTGNFADYSFAVDNGSRVVTSVL-EGTDRLTDVEFARFADGV 342
Query: 351 IDSVNVKQR 359
D
Sbjct: 343 YDFATETFT 351
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 4/147 (2%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
D T+ DS DL D +G + +ID + + + + G
Sbjct: 580 GDFRAAVTLTDSAHLDLAD--ELGDLGAFIDGDAFGI-DVRTGGGDDEFTGTDGNDIFDG 636
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S GND++ GN+ ++ +GND DG +G+DT + Y + N + +
Sbjct: 637 SGGNDILNGNAGDDKLTGGAGNDTIDGGAGIDTALFAGNFADYSL-ALNNGDHILTSVAE 695
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRS 360
D L+ VE RFAD D
Sbjct: 696 GADTLTGVEFARFADGLYDFGTETFTP 722
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 12/121 (9%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ + P I DSG +DL+ G + +++ G N I
Sbjct: 382 DVIRDSEINPLVPVNLVISDSG---TVDLSDELGSGS---------ANVIGTSGNDVITT 429
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G G D + G + + GND G G D + + + +
Sbjct: 430 GAGNDNIAGGDGADTLNGGAGYDSLNGGVGNDTLYGGDGNDHISGDVGNDVIRGGAGNDT 489
Query: 325 I 325
I
Sbjct: 490 I 490
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 24/216 (11%)
Query: 196 GAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
GA + G ++ + P T+ DS DL D
Sbjct: 10 GATITNTGAEFEAYDVIRYSEANPSGPVSLTVSDSSAADLADELGSVSA----------- 58
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + TI + + G G D + G + +++ + ++GND G G D
Sbjct: 59 -DVTGSSGDNTITTGAGNDILSGGDGADTLTGGAGDDIIYGNAGNDKLVGGDGNDRI-TD 116
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR-----FADQCIDSVNVKQRSILEYT 365
+ D + D L +ER D ++ ++ T
Sbjct: 117 GGFGFVSGPDGSLQPEIVDIDGGDGDDLITIERFAPLISGTIDGGAGIDTLRASALRSLT 176
Query: 366 ASYEDLIQVIGQDVFESMKHFYEF-GLSEGRDITFD 400
+++++ V S F F ++ D F+
Sbjct: 177 IKNVEVLELADFQVSGSSSQFESFDKIARSTDPVFN 212
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 58/197 (29%), Gaps = 38/197 (19%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTIAQHTVI 268
+ I G+D + G LN + + S+ G N T+
Sbjct: 415 SANVIGTSGNDVITTGAGNDNI-----AGGDGADTLNGGAGYDSLNGGVGNDTLYGGDGN 469
Query: 269 ESVVGSSGNDVVIGNSANNVF---------------FESSGND-------------VFDG 300
+ + G GNDV+ G + N+ GND DG
Sbjct: 470 DHISGDVGNDVIRGGAGNDTIDDGELFGLSPEVIDINAGDGNDSISVGTLAPLNSGTVDG 529
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G+DT + + +N ++ A + E D + +
Sbjct: 530 GDGIDTL----QAASLRGLTIKNIEVLETAGWSVAGSSAQFESFDKIVWSTDPFGDFRAA 585
Query: 361 ILEYTASYEDLIQVIGQ 377
+ +++ DL +G
Sbjct: 586 VTLTDSAHLDLADELGD 602
>gi|416552|emb|CAA46638.1| hatching enzyme [Paracentrotus lividus]
Length = 587
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIKFIS 83
+ R +P + L+ D+ + +A++ R A W V L+F E + DI+
Sbjct: 173 TWSRNQPVTYSFGALTSDLNQ--NDAKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKF 230
Query: 84 SNNGYVCTPRYDSRYFM----------EINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + +D R + + +FD ++ W G GT L A HE GH+LG
Sbjct: 231 GSYDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETWTIGTRSGTNLFQVAAHEFGHSLG 290
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDIVAV 191
L H S + S + Y GY + DI +
Sbjct: 291 LYH--------------------STVRSALMY--------PYYQGYVPNFRLDSDDIAGI 322
Query: 192 QKIYGAPKGS 201
+ +YG+ GS
Sbjct: 323 RSLYGSNSGS 332
>gi|17233320|ref|NP_490410.1| hypothetical protein alr7304 [Nostoc sp. PCC 7120]
gi|17135842|dbj|BAB78388.1| alr7304 [Nostoc sp. PCC 7120]
Length = 4936
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 64/166 (38%), Gaps = 9/166 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYE 257
G GN+ Y D+ +T GG D ++ ++ N +L ++I G
Sbjct: 4605 TGGAGNDTY-FVDSSNDTIAEETD---GGSDTVNASVSWTLDDNLENLTLTGSNAINGTG 4660
Query: 258 KNM--TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI ++ + G +D + GN+ N++ +GND DG G D A +
Sbjct: 4661 NALRNTITGNSADNILSGGDNDDTLRGNAGNDILNGGAGNDSLDGGLGDDVMTGGASNDT 4720
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
Y N I+ +A + D + L D + + + I
Sbjct: 4721 Y-FVDSSNDTIIEEA-DGGTDTVRASITLTLGDHLENLILIGNSPI 4764
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 7/182 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDL----LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ I D G ++ +D + +++ T ++I G N T+A
Sbjct: 4105 TFNATNRTFSGIPGNVDVGTLNITVQAIDTSNASISDSFVLTITNLINNIVGTSGNNTLA 4164
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G GND++ G + N+ +G+D G G DT+ + + K+ N
Sbjct: 4165 GTPNNDNIQGLGGNDIIFGLAGNDTLNGGTGSDTMTGGLGDDTYIVD--NNVDKVVENLN 4222
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFES 382
I + L +VE L S +I+ + L G D+
Sbjct: 4223 EGIDTVRSSISYTLLENVENLILTGTSNISGTGNILSNIITGNSGANTLNGKAGDDILNG 4282
Query: 383 MK 384
Sbjct: 4283 EG 4284
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 16/181 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----------VKNYIDLNT 247
G N+ Y D+ + GG D + ++ + ID
Sbjct: 4713 TGGASNDTY-FVDSSNDTIIEEAD---GGTDTVRASITLTLGDHLENLILIGNSPIDGTG 4768
Query: 248 ESW-SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++I G N ++ ++++ G+D + G+S N+ +GND+ G G D
Sbjct: 4769 NALRNNITGNVANNILSGGADNDTIISGDGDDTLYGDSGNDTLTGGNGNDILVGGMGSDR 4828
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ I + + D L V+ F + + + +L A
Sbjct: 4829 LTGGNGKDTFAFSAPITDGIDTITDFNPLDDLLRVDAAGFGGGLVAGTLLASQFVLGTAA 4888
Query: 367 S 367
Sbjct: 4889 K 4889
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 12/146 (8%)
Query: 199 KGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS- 252
+LGN + ++ I D + + G N L + +
Sbjct: 4494 NWTLGNNLENLTLTGSNGINGTGNALKNIITGNNGDNI----LSGGDNDDTLRGNAGNDT 4549
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N +++ + + G+ GND + G + N+ +GND DG G D A
Sbjct: 4550 LFGGSGNDSLSGGIGDDILNGADGNDNLKGEAGNDTLDGGAGNDSLDGGLGDDVMTGGAG 4609
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ Y + + + + + D +
Sbjct: 4610 NDTYFVDSSND--TIAEETDGGSDTV 4633
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 11/150 (7%)
Query: 199 KGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS- 252
+LGN + ++ I D + + G N L +
Sbjct: 4350 TWTLGNHLENLTLIGSSAINGTGNALKNIIIGNSADNI----LSGGDNDDILRGGEGNDT 4405
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N ++ +S+ G GND + G+ N++ ++GND DG G D A
Sbjct: 4406 LYGGAGNDSLDGGIGNDSLNGEDGNDNLKGDVGNDILNGNAGNDTLDGGLGDDVMTGGAG 4465
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ +Y N I+ + NE + +
Sbjct: 4466 NDIY-FVDSSNDTIIEELNEGTDTVNASIN 4494
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 27/194 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G+NI T+ + G+D L GG N S+ G
Sbjct: 4524 TGNNGDNILSGGDND------DTLRGNAGNDTL----FGGSGND---------SLSGGIG 4564
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + +++ G +GND + G + N+ G+DV G +G DT+F + +
Sbjct: 4565 DDILNGADGNDNLKGEAGNDTLDGGAGNDSLDGGLGDDVMTGGAGNDTYFVDSSNDTIAE 4624
Query: 319 YRFENAIIVYDANEHKQD------FLSDVERLRFADQCI--DSVNVKQRSILEYTASYED 370
+ V + D L+ + + +IL + +
Sbjct: 4625 ETDGGSDTVNASVSWTLDDNLENLTLTGSNAINGTGNALRNTITGNSADNILSGGDNDDT 4684
Query: 371 LIQVIGQDVFESMK 384
L G D+
Sbjct: 4685 LRGNAGNDILNGGA 4698
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 18/155 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYE 257
G LG++ Y ++ ++ + + G D + + ++N +L S+I G
Sbjct: 4200 TGGLGDDTYIVD--NNVDKVVENL--NEGIDTVRSSISYTLLENVENLILTGTSNISGTG 4255
Query: 258 KNMT--IAQHTVI---------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I ++ + + G GND + G N+V +GND+ DG G D
Sbjct: 4256 NILSNIITGNSGANTLNGKAGDDILNGEGGNDNLKGEDGNDVLNGGAGNDILDGGLGDDV 4315
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ +Y + + I+ D D ++ +
Sbjct: 4316 MTGGVGNDIYYVDSSND--IIIDELNEGTDTVNTI 4348
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 76/420 (18%), Positives = 142/420 (33%), Gaps = 87/420 (20%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDI 79
W + + + + D+ LN Q + + S +F T + ++I
Sbjct: 4102 TWLTFNATNR--TFSGIPGNVDVGTLNITVQAI-DTSNASISD----SFVLTITNLINNI 4154
Query: 80 KFISSNNGYVCTPRYDSRYFMEIN-----FDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S NN TP D+ + N D G G T+ GL
Sbjct: 4155 VGTSGNNTLAGTPNNDNIQGLGGNDIIFGLAGNDTLNGGTGSDTMTG-----------GL 4203
Query: 135 MHPGSYNGGYPVYGVDNDYEN---------DSFLTSVMSY----FMPQDSMMDASFGYCA 181
G Y VDN+ + D+ +S+ SY + + S
Sbjct: 4204 --------GDDTYIVDNNVDKVVENLNEGIDTVRSSI-SYTLLENVENLILTGTSNISGT 4254
Query: 182 TPMVSDIVAVQKIYGAPKGS--LGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTL- 235
++S+I+ GA + G++I K + G+D+LD L
Sbjct: 4255 GNILSNIITGNS--GANTLNGKAGDDILNGEGGNDNLKGEDGNDVLNGGAGNDILDGGLG 4312
Query: 236 ----IGGVKNYI------------DLNTESWS-------SIGGYEKNMTIAQHTVIESVV 272
GGV N I +LN + + ++G + +N+T+ + I +
Sbjct: 4313 DDVMTGGVGNDIYYVDSSNDIIIDELNEGTDTVNTIITWTLGNHLENLTLIGSSAI-NGT 4371
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ +++IGNSA+N+ +D+ G G DT + A + +++ D N+
Sbjct: 4372 GNALKNIIIGNSADNILSGGDNDDILRGGEGNDTLYGGAGNDSLDGGIGNDSLNGEDGND 4431
Query: 333 H-----KQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D L + + L I +S + +I+ + +
Sbjct: 4432 NLKGDVGNDILNGNAGNDTLDGGLGDDVMTGGAGNDIYFVDSSNDTIIEELNEGTDTVNA 4491
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 30/188 (15%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ T+Y G+D LD GG+ N S+ G + N + + + G
Sbjct: 4398 RGGEGNDTLYGGAGNDSLD----GGIGND---------SLNGEDGNDNLKGDVGNDILNG 4444
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-------- 325
++GND + G ++V +GND++ S DT + N
Sbjct: 4445 NAGNDTLDGGLGDDVMTGGAGNDIYFVDSSNDTIIEELNEGTDTVNASINWTLGNNLENL 4504
Query: 326 --IVYDANEHKQDFLSDV-------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + L ++ L D L + + L IG
Sbjct: 4505 TLTGSNGINGTGNALKNIITGNNGDNILSGGDNDDTLRGNAGNDTLFGGSGNDSLSGGIG 4564
Query: 377 QDVFESMK 384
D+
Sbjct: 4565 DDILNGAD 4572
>gi|167648203|ref|YP_001685866.1| hemolysin-type calcium-binding region [Caulobacter sp. K31]
gi|167350633|gb|ABZ73368.1| Hemolysin-type calcium-binding region [Caulobacter sp. K31]
Length = 539
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 40/123 (32%), Gaps = 11/123 (8%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS----------IGGYEKNMTI 262
+ ++D+GG D L + IDL S + G TI
Sbjct: 10 NQAGTSYSCLWDAGGVDTLSAEGAS-IACTIDLREASLLNEAGGGGWLSSGSGIYGGFTI 68
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G +D+V GN N GND G G D S
Sbjct: 69 AHDAKIENAIGGEADDIVTGNGLANKILGGGGNDNLSGELGADVLLGGDGSDSLDGGLGN 128
Query: 323 NAI 325
+ +
Sbjct: 129 DTL 131
>gi|209525616|ref|ZP_03274154.1| Na-Ca exchanger/integrin-beta4 [Arthrospira maxima CS-328]
gi|209493949|gb|EDZ94266.1| Na-Ca exchanger/integrin-beta4 [Arthrospira maxima CS-328]
Length = 1474
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 16/144 (11%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ G+D L D + GG N L G N +I + +++ G G
Sbjct: 59 LFGGPGNDTLFGELGDDVIYGGEGNNFIL---------GNAGNDSIVGGSGNDTIYGGQG 109
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH--K 334
+D +IG +++ F GND+ SG +T A S L+ I N +
Sbjct: 110 SDTLIGGEGDDLLFGDRGNDILYTGSGFNTLTGGAGSDLFVIGVGFNGGQTDVITDFRPG 169
Query: 335 QDFLSDVERLRFADQCIDSVNVKQ 358
D ++ L F+D I
Sbjct: 170 FDLIALANGLEFSDLEIAQQGNDT 193
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 43/126 (34%), Gaps = 11/126 (8%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
GDD L + TL G N + + + G N T+ + + G GN+ ++
Sbjct: 28 GDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGNDTLFGELGDDVIYGGEGNNFIL 87
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------KIYRFENAIIVYDANEHKQ 335
GN+ N+ SGND G G DT L I +
Sbjct: 88 GNAGNDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRGNDILYTGSGFNTLTGGAGSD 147
Query: 336 DFLSDV 341
F+ V
Sbjct: 148 LFVIGV 153
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 8/137 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + T+ +++ GN+++ G ++ F GND G G D +
Sbjct: 23 IQGLAGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGNDTLFGELGDDVIYGGEG 82
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFLSDVE--RLRFADQCIDSVNVKQ-RSILEY 364
+ ++I+ N+ D L E L F D+ D + + L
Sbjct: 83 NNFILGNAGNDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRGNDILYTGSGFNTLTG 142
Query: 365 TASYEDLIQVIGQDVFE 381
A + + +G + +
Sbjct: 143 GAGSDLFVIGVGFNGGQ 159
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 36/113 (31%), Gaps = 7/113 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G+S +D + G + ++ GND G + F Y F
Sbjct: 12 DLLLGTSEDDEIQGLAGDDTLLGFQGNDTLFAGEGNNLLFGGQGDD----YLFGGPGNDT 67
Query: 329 DANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQD 378
E D + E + DS+ + Y D LI G D
Sbjct: 68 LFGELGDDVIYGGEGNNFILGNAGNDSIVGGSGNDTIYGGQGSDTLIGGEGDD 120
>gi|225377885|ref|ZP_03755106.1| hypothetical protein ROSEINA2194_03545 [Roseburia inulinivorans DSM
16841]
gi|225210323|gb|EEG92677.1| hypothetical protein ROSEINA2194_03545 [Roseburia inulinivorans DSM
16841]
Length = 282
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDL 411
Y S DL G D + HF G+ EGR F+ +Y +Y DL
Sbjct: 36 AYQAVFDAEYYYNSNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDL 95
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ FG+D + HY +G EGRN
Sbjct: 96 QAAFGNDLASYCAHYAANGAAEGRNATTL 124
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRN 497
F A Y S+ DL AF Q +HF + G EGR F+ +Y +Y DL+
Sbjct: 41 FDAEYYYNSNPDLQAAFGYDA---QKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQA 97
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAF 524
FG+D + HY +G EGRN
Sbjct: 98 AFGNDLASYCAHYAANGAAEGRNATTL 124
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y S DL+ FG D H+++ G+ EGR+ A F Y A++ DL AF
Sbjct: 40 VFDAEYYYNSNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQAAF 99
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ + H++ G EGR T
Sbjct: 100 GND---LASYCAHYAANGAAEGRNAT 122
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYDDLWN 581
F A Y S+ DL AF Q +HF + G EGRS FN +Y +Y DL
Sbjct: 41 FDAEYYYNSNPDLQAAFGYD---AQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQA 97
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHK 635
FG+D ++ HY +G EGR + S ++ S + + FD +
Sbjct: 98 AFGNDLASYCAHYAANGAAEGR----NATTLISAGEGAQASIVRGSCTTKFDPR 147
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD+ Y S DL+ FG D H+++ G+ EGR+ A F Y A++ DL A
Sbjct: 39 AVFDAEYYYNSNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQAA 98
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT 566
F + + + H++ G EGR+ T
Sbjct: 99 FGND---LASYCAHYAANGAAEGRNAT 122
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 22/67 (32%)
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D + ++ Y A+Y DL G D+ H+ G
Sbjct: 56 AFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQAAFGNDLASYCAHYAANGA 115
Query: 392 SEGRDIT 398
+EGR+ T
Sbjct: 116 AEGRNAT 122
>gi|172064168|ref|YP_001811819.1| hemolysin-type calcium-binding region [Burkholderia ambifaria MC40-6]
gi|171996685|gb|ACB67603.1| Hemolysin-type calcium-binding region [Burkholderia ambifaria MC40-6]
Length = 1534
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 87/236 (36%), Gaps = 21/236 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+ + + GN + + + TI+ GDD+L +G N
Sbjct: 859 GSDELNGGNGNDVLSGETGNDKIFGGAGNDTIWGGDGDDIL----VGFTAT----NDAKQ 910
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + TI + ++G GND++ G + N+ +G+D G G D F
Sbjct: 911 SLAAWETDDDTIYGGAGNDLILGGLGNDLLYGEAGNDEIQGGAGHDRLYGGDGNDRLFGQ 970
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + ++ ++ + + ++ L +D + L D + L+ A
Sbjct: 971 VGNDILYGGAGDDLLVGFTGDNEEKRTLAPGETDDDYLYGGDGRDTLLGGLGNDYLDGGA 1030
Query: 367 SYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYL--GSYDDLRNVFGSD 418
+ + G D + S+ +EG D S Y+ + ++LR V G D
Sbjct: 1031 GADHMEGGQGNDTYIVNSVNDVILEYANEGYDTVISSANYILNANIEELRLVEGFD 1086
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 10/156 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYID-------LNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ + G+D+ D ++I+ L +GG +N + T +++ G
Sbjct: 581 LIGTDGNDVFDANYYAAYGHWINSGLLVNFLAGGGDDVMGGSWRNDNLWGGTGNDTLFGY 640
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G ++ +GNDV DG SG D+ F A + + ++ ++ + A+
Sbjct: 641 DGDDRLYGEEGDDELQGGAGNDVLDGGSGNDSLFGQAGNDIMNGGDGDDIMMGFTASNEA 700
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ L+ E D + R Y D
Sbjct: 701 KQALAPGET---DDDVMYGGAGNDRMWGGLGNDYMD 733
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 18/147 (12%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + V G GND + G + N+ GND G +G D F A
Sbjct: 725 GGLGNDYMDGGDGADLVRGGHGNDTIFGGTGNDELHGDEGNDRLLGEAGHDRIFGEAGDD 784
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ ++ + A+ + LS E L + L
Sbjct: 785 VIWGGDGDDVLVGFTADNDAKQTLSWGE--------------TDNDALYGGNGNDALYGG 830
Query: 375 IGQDVFES--MKHFYEFGLSEGRDITF 399
+G D + F + G EG D F
Sbjct: 831 LGNDYLDGGNDDDFLDGG--EGDDTLF 855
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 15/175 (8%)
Query: 220 QTIYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS--- 275
I+ GDD+L T K + ++ G N + + + G +
Sbjct: 784 DVIWGGDGDDVLVGFTADNDAKQTLSWGETDNDALYGGNGNDALYGGLGNDYLDGGNDDD 843
Query: 276 ------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G+D + G + ++ +GNDV G +G D F A + ++ ++ +
Sbjct: 844 FLDGGEGDDTLFGGAGSDELNGGNGNDVLSGETGNDKIFGGAGNDTIWGGDGDDILVGFT 903
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A + L+ E D IL + L G D +
Sbjct: 904 ATNDAKQSLAAWE----TDDDTIYGGAGNDLILGGL-GNDLLYGEAGNDEIQGGA 953
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ ++ +IGN NNV +GND+ G G DT+ + + I + + D
Sbjct: 1379 GNALDNTIIGNRGNNVLDGGAGNDILVGGLGNDTYRFGRGAGRDTIQDDDETLGNNDVIS 1438
Query: 333 HKQDFLSD 340
+D
Sbjct: 1439 IGAGVSAD 1446
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
GN+ +N + GN+V DG +G D + Y+ R + D
Sbjct: 1378 TGNALDNTIIGNRGNNVLDGGAGNDILVGGLGNDTYRFGRGAGRDTIQD 1426
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++ ++V++GNSA+N+ +G D G G DT++ E V
Sbjct: 1088 NGTGNALDNVIVGNSADNILDGVTGADTMIGGKGNDTYYVDNVGDRVVERAGEGIDTVQS 1147
Query: 330 ANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ D + ++ L F V+ + Y + E
Sbjct: 1148 KISYALGDHVENLNLLDFGKPEKGLVDGTSVLVYGYPKANE 1188
>gi|74151801|dbj|BAE29689.1| unnamed protein product [Mus musculus]
gi|74181547|dbj|BAE30039.1| unnamed protein product [Mus musculus]
gi|74191355|dbj|BAE30260.1| unnamed protein product [Mus musculus]
gi|74207241|dbj|BAE30809.1| unnamed protein product [Mus musculus]
Length = 473
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|254563888|ref|YP_003070983.1| hypothetical protein METDI5572 [Methylobacterium extorquens DM4]
gi|254271166|emb|CAX27177.1| hypothetical protein METDI5572 [Methylobacterium extorquens DM4]
Length = 140
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD YL Y D+R HYI +G +EGR+P A F Y+ ++ D+ +
Sbjct: 34 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 89
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 90 GCNP-------LVHFVECGLAEGR 106
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
I + + Y Y D+ + H+ +G EGRD + F YL +
Sbjct: 27 SIVRTPLPGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKA 82
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+R H++ G+ EGR
Sbjct: 83 NPDVRE----SGCNPLVHFVECGLAEGRK 107
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD YL Y D+R HYI +G +EGR+P A F Y+ ++ D+ +
Sbjct: 34 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 89
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
+ HF G EGR
Sbjct: 90 GCNP-------LVHFVECGLAEGR 106
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 519 RNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTS 575
R P F + Y+ + D+ AF P + H+ ++G+ EGR + F+ + YL +
Sbjct: 30 RTPLPGFDPIYYLYWYPDV-RAFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKA 82
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ H++ G+ EGR
Sbjct: 83 NPDVRE----SGCNPLVHFVECGLAEGR 106
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 435 RNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGS 491
R P F + Y+ + D+ AF P + H+ ++G EGR F YL +
Sbjct: 30 RTPLPGFDPIYYLYWYPDV-RAFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKA 82
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGR 519
D+R H++ G+ EGR
Sbjct: 83 NPDVRESG----CNPLVHFVECGLAEGR 106
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR--ALGISGMQF 612
F+P YL Y D+ HYI +G +EGR + G SG +
Sbjct: 34 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGY 79
>gi|240141372|ref|YP_002965852.1| hypothetical protein MexAM1_META1p4971 [Methylobacterium extorquens
AM1]
gi|240011349|gb|ACS42575.1| hypothetical protein MexAM1_META1p4971 [Methylobacterium extorquens
AM1]
Length = 137
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD YL Y D+R HYI +G +EGR+P A F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
I + + Y Y D+ + H+ +G EGRD + F YL +
Sbjct: 24 SIVRTPLPGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKA 79
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+R H++ G+ EGR
Sbjct: 80 NPDVRE----SGCNPLVHFVECGLAEGRK 104
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD YL Y D+R HYI +G +EGR+P A F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 519 RNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTS 575
R P F + Y+ + D+ AF P + H+ ++G+ EGR + F+ + YL +
Sbjct: 27 RTPLPGFDPIYYLYWYPDV-RAFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKA 79
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ H++ G+ EGR
Sbjct: 80 NPDVRE----SGCNPLVHFVECGLAEGR 103
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 435 RNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGS 491
R P F + Y+ + D+ AF P + H+ ++G EGR F YL +
Sbjct: 27 RTPLPGFDPIYYLYWYPDV-RAFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKA 79
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGR 519
D+R H++ G+ EGR
Sbjct: 80 NPDVRESG----CNPLVHFVECGLAEGR 103
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR--ALGISGMQF 612
F+P YL Y D+ HYI +G +EGR + G SG +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGY 76
>gi|163853918|ref|YP_001641961.1| hypothetical protein Mext_4522 [Methylobacterium extorquens PA1]
gi|163665523|gb|ABY32890.1| hypothetical protein Mext_4522 [Methylobacterium extorquens PA1]
Length = 137
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD YL Y D+R HYI +G +EGR+P A F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
I + + Y Y D+ + H+ +G EGRD + F YL +
Sbjct: 24 SIVRTPLPGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKA 79
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+R H++ G+ EGR
Sbjct: 80 NPDVRE----SGCNPLVHFVECGLAEGRK 104
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD YL Y D+R HYI +G +EGR+P A F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 519 RNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTS 575
R P F + Y+ + D+ AF P + H+ ++G+ EGR + F+ + YL +
Sbjct: 27 RTPLPGFDPIYYLYWYPDV-RAFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKA 79
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ H++ G+ EGR
Sbjct: 80 NPDVRE----SGCNPLVHFVECGLAEGR 103
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 435 RNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGS 491
R P F + Y+ + D+ AF P + H+ ++G EGR F YL +
Sbjct: 27 RTPLPGFDPIYYLYWYPDV-RAFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKA 79
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGR 519
D+R H++ G+ EGR
Sbjct: 80 NPDVRESG----CNPLVHFVECGLAEGR 103
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR--ALGISGMQF 612
F+P YL Y D+ HYI +G +EGR + G SG +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGY 76
>gi|115392138|ref|NP_032631.3| macrophage metalloelastase precursor [Mus musculus]
gi|152031638|sp|P34960|MMP12_MOUSE RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|26354881|dbj|BAC41067.1| unnamed protein product [Mus musculus]
gi|74142802|dbj|BAE42446.1| unnamed protein product [Mus musculus]
gi|74142832|dbj|BAE42457.1| unnamed protein product [Mus musculus]
gi|74142834|dbj|BAE42458.1| unnamed protein product [Mus musculus]
gi|74142836|dbj|BAE42459.1| unnamed protein product [Mus musculus]
gi|74142838|dbj|BAE42460.1| unnamed protein product [Mus musculus]
gi|74142866|dbj|BAE42472.1| unnamed protein product [Mus musculus]
gi|74142870|dbj|BAE42474.1| unnamed protein product [Mus musculus]
gi|74142874|dbj|BAE42476.1| unnamed protein product [Mus musculus]
gi|74142878|dbj|BAE42478.1| unnamed protein product [Mus musculus]
gi|74142948|dbj|BAE42502.1| unnamed protein product [Mus musculus]
gi|74142986|dbj|BAE42516.1| unnamed protein product [Mus musculus]
gi|74143029|dbj|BAE42531.1| unnamed protein product [Mus musculus]
gi|74212943|dbj|BAE33411.1| unnamed protein product [Mus musculus]
gi|74212950|dbj|BAE33414.1| unnamed protein product [Mus musculus]
gi|74213230|dbj|BAE41746.1| unnamed protein product [Mus musculus]
gi|74214940|dbj|BAE33469.1| unnamed protein product [Mus musculus]
gi|74218123|dbj|BAE42035.1| unnamed protein product [Mus musculus]
gi|74218134|dbj|BAE42039.1| unnamed protein product [Mus musculus]
gi|74221350|dbj|BAE42154.1| unnamed protein product [Mus musculus]
gi|74221403|dbj|BAE42177.1| unnamed protein product [Mus musculus]
gi|74222891|dbj|BAE42294.1| unnamed protein product [Mus musculus]
Length = 473
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|301176641|ref|NP_001180379.1| matrix metalloproteinase 1 [Nasonia vitripennis]
Length = 555
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 58/273 (21%), Positives = 90/273 (32%), Gaps = 68/273 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---ETS 74
L+ W + YK + E +E+A+ A S +L F
Sbjct: 120 LQSSGWRVKKLTYKISKYPR------VLEKGAVDKEIAK-AFSVRSDYTNLQFTPKKSGQ 172
Query: 75 IHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+H +I+F +G Y Y + +FD + W +GT L A
Sbjct: 173 VHIEIRFERGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDTEQWTINSFRGTNLFQVAA 232
Query: 126 HEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HE GH+LGL H + + G D D+ +S
Sbjct: 233 HEFGHSLGLSHSDVKSALMAPFYRGYDPDFLLES-------------------------- 266
Query: 184 MVSDIVAVQKIYGAPKGSLG-NNIYKIEVQQK----------DSPFIQTIYDSGGDDLL- 231
DI +Q +YG+ G +NI++ +P I TI++S D
Sbjct: 267 --DDIQGIQALYGSKNEDGGESNIHQRTTHLPPSSEEDSQLCSNPKIDTIFNSAEGDTFV 324
Query: 232 -------DLTLIGGVKNYIDLNTESWSSIGGYE 257
LT G Y L + SW ++ G
Sbjct: 325 FRGDLYWKLTTDGVESGYPRLISTSWKNLPGNI 357
>gi|74142899|dbj|BAE42486.1| unnamed protein product [Mus musculus]
Length = 473
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|26354436|dbj|BAC40846.1| unnamed protein product [Mus musculus]
Length = 319
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 62/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YG P
Sbjct: 258 DIRNIQSLYGPP 269
>gi|229825053|ref|ZP_04451122.1| hypothetical protein GCWU000182_00403 [Abiotrophia defectiva ATCC
49176]
gi|229790425|gb|EEP26539.1| hypothetical protein GCWU000182_00403 [Abiotrophia defectiva ATCC
49176]
Length = 1110
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 24/179 (13%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---KDSPFIQTIYDS 225
+ D S Y A +S I + + + G++ ++I IY
Sbjct: 919 NYFADKSEEYAAAIDLSGIGTIFRSSSSNENGTITDDIISGSSANDSINGDAGNDIIYGK 978
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D + GG N S+ G E + ++ + ++G +G+D ++G
Sbjct: 979 EGNDTI----YGGNGND---------SLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEG 1025
Query: 286 NNVFFESSGNDVFDGS-------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
++ +GND G G DT+ + + I + D + K+D
Sbjct: 1026 EDILDGGAGNDKLYGGNSNGYSVGGNDTYIFGRGYGVDTIRDADTTEGNLDVIKTKEDI 1084
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 6/125 (4%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G D+ + I+ + + I G E N TI +S+ G G+D + +
Sbjct: 947 NENGTITDDIISGSSANDSINGDAGNDI-IYGKEGNDTIYGGNGNDSLNGGEGDDSLYAD 1005
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSY-----LYKIYRFENAIIVYDANEHKQDFL 338
N+V +G+D G G D A + Y + D +
Sbjct: 1006 VGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGNSNGYSVGGNDTYIFGRGYGVDTI 1065
Query: 339 SDVER 343
D +
Sbjct: 1066 RDADT 1070
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 24/153 (15%)
Query: 229 DLLDLTLIGGVKNY-----IDLNT------ESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
DL++ K+ IDL+ S S+ G + I+ + +S+ G +GN
Sbjct: 913 DLINFRNYFADKSEEYAAAIDLSGIGTIFRSSSSNENGTITDDIISGSSANDSINGDAGN 972
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D++ G N+ + +GND +G G D+ + + + D
Sbjct: 973 DIIYGKEGNDTIYGGNGNDSLNGGEGDDSLYADVGNDVL-------------IGGAGDDT 1019
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
L E D + + + Y+ D
Sbjct: 1020 LVGGEGEDILDGGAGNDKLYGGNSNGYSVGGND 1052
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 22/150 (14%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G + + I + I G N +I + + G GND + G
Sbjct: 933 DLSGIGTIFRSSSSNENGTI-----TDDIISGSSANDSINGDAGNDIIYGKEGNDTIYGG 987
Query: 284 SANNVFFESS---------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-- 332
+ N+ GNDV G +G DT + + + ++N
Sbjct: 988 NGNDSLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGNSNGYS 1047
Query: 333 -HKQDFL-----SDVERLRFADQCIDSVNV 356
D V+ +R AD +++V
Sbjct: 1048 VGGNDTYIFGRGYGVDTIRDADTTEGNLDV 1077
>gi|74222658|dbj|BAE42201.1| unnamed protein product [Mus musculus]
Length = 473
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|113477710|ref|YP_723771.1| peptidase-like protein [Trichodesmium erythraeum IMS101]
gi|110168758|gb|ABG53298.1| peptidase-like [Trichodesmium erythraeum IMS101]
Length = 1289
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 71/354 (20%), Positives = 113/354 (31%), Gaps = 55/354 (15%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKP---DVLTTHRLSFDITELNPNAQEVARWALGE-W 62
+ + D LL W I Y D + D+ E++ QE R L +
Sbjct: 496 SKSGDYQIDALLSPYKWGTNTITYSFYDNDSGPYYGAERDVGEVSDKVQEDIRHILENIY 555
Query: 63 SKVVDLTFEETSIHSD----IKFISSN---------------NGYVCTPRYDSRYFMEIN 103
+ DL F E + S+ I+ + S+ N +F
Sbjct: 556 EPLSDLDFVEVADTSNSYGLIRIMKSSNPNYAYAYYPYADDYNAGNLLDLAGDVHFNVYY 615
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
D + G GT +HE+GHA+GL HP P D+ +VM
Sbjct: 616 DGNGDHNNFQGGPGTHGYMTLIHELGHAVGLKHPHEDGDTLPE-------NEDNTSNTVM 668
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS----PFI 219
SY D+ A+Q IYG + +++ D+
Sbjct: 669 SYNFTYT---------ADNLRSYDVNALQYIYG--FETPEDSVTVKSPNGGDTLKLGKSY 717
Query: 220 QTIYDSGGDDLLDLTLI--GGVKNYIDLNTESWSSIG-GYEKNMTIA--QHTVIESVVGS 274
+D + + L L G + I +T S S G +M I I SV +
Sbjct: 718 TITWDDNFSENVKLELYKGGSFDSIITNSTASDGSYGWTLPTSMAIGSDYKVKITSVSDA 777
Query: 275 SGNDVVIGN-----SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+D+ N +G DV + D + S +IY ++
Sbjct: 778 GVSDLSDSNFTIERDGVITVKSPNGGDVINTGDTYDVTWDDNISENVRIYLYQG 831
>gi|26354570|dbj|BAC40913.1| unnamed protein product [Mus musculus]
Length = 473
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|74213223|dbj|BAE41743.1| unnamed protein product [Mus musculus]
Length = 473
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|194292185|ref|YP_002008092.1| metalloprotease, hemolysin-type calcium-binding region [Cupriavidus
taiwanensis LMG 19424]
gi|193226089|emb|CAQ72036.1| metalloprotease, Hemolysin-type calcium-binding region [Cupriavidus
taiwanensis LMG 19424]
Length = 1648
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 69/179 (38%), Gaps = 1/179 (0%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ T+ G DLLD + G N+ + + S +++ N+ +
Sbjct: 1433 GANDILRGGMGNDTLDGGAGIDLLDFSDATGAINFTLVQSGSATTVNLGSVNLGTDNYRG 1492
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E V+GS+ ND + G++ N+V +G+DV G +G D A + + +
Sbjct: 1493 MEGVIGSAFNDTLAGSAGNDVLRGGAGDDVMSGGAGNDLLVGGAGADTLAGGSGSDTFRI 1552
Query: 328 YDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A+ D ++D + A + + + +A+ +++ D +
Sbjct: 1553 LRADAASVDTITDFDLAPAAAGGDVLDLADLLAGVSVTSANAAQFVRLAEVDGNTVVSL 1611
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 4/168 (2%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G D+LDL+ G + L S + + + ++ +E V+GS ND
Sbjct: 1370 DTLDGGAGIDMLDLSDAGSGLAF-TLAQGSGTLVNLSGVGLGSDNYSNMEGVIGSRFNDS 1428
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY---RFENAIIVYDANEHKQD 336
+ G+ AN++ GND DG +G+D + + + + D
Sbjct: 1429 LTGSGANDILRGGMGNDTLDGGAGIDLLDFSDATGAINFTLVQSGSATTVNLGSVNLGTD 1488
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+E + + +L A + + G D+
Sbjct: 1489 NYRGMEGVIGSAFNDTLAGSAGNDVLRGGAGDDVMSGGAGNDLLVGGA 1536
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 18/185 (9%)
Query: 210 EVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT-IAQHTV 267
F T+ D GG +T+ N + ++G + + +
Sbjct: 1278 SDNSTSGSFSYTVSDGAGGSSTATVTVKVSST-----NGGATVTLGSQPYQASYLDGGSN 1332
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G++ +D IG +A++ +G+DV G +G DT A + + + +
Sbjct: 1333 TDELNGAAASDFFIGGAASDTLRGGAGDDVLRGGAGDDTLDGGAGIDMLDLSDAGSGLAF 1392
Query: 328 YDANEHKQ-----------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
A D S++E + + IL + L G
Sbjct: 1393 TLAQGSGTLVNLSGVGLGSDNYSNMEGVIGSRFNDSLTGSGANDILRGGMGNDTLDGGAG 1452
Query: 377 QDVFE 381
D+ +
Sbjct: 1453 IDLLD 1457
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 10/181 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ + G D L T + N + + + + + V G GND +
Sbjct: 3 TVTGTNGSDSLIGTASSDTILSGNGND----YVSAGDGSDYVDAGNGDDIVEGGDGNDTL 58
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G + + F GND G +G D + + + I + A +Y+ + D L
Sbjct: 59 LGANGKDRVFGGRGNDSLSGGNGTDAVYGGSGDDV--IGSADGASALYNGDNGG-DTLYG 115
Query: 341 VERLRFADQ--CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+AD + + + + + +DLI D G GRD
Sbjct: 116 DGYDSYADYLLGRGHESARPGNDRIHGGNGDDLIYGDNGDDAAVGGDDIIAG-GNGRDTV 174
Query: 399 F 399
+
Sbjct: 175 Y 175
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 49/157 (31%), Gaps = 20/157 (12%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG + + T+Y G D D L G ++ N I
Sbjct: 86 YGGSGDDVIGSADGASALYNGDNGGDTLYGDGYDSYADYLLGRGHESARPGNDR----IH 141
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLD 305
G + I ++ VG G+D++ G + + + GND G SG D
Sbjct: 142 GGNGDDLIYGDNGDDAAVG--GDDIIAGGNGRDTVYGEGGNDTIAGGGGGDTLRGGSGRD 199
Query: 306 TFFYYAPSYLYK-----IYRFENAIIVYDANEHKQDF 337
TF Y A + I F+ D D
Sbjct: 200 TFVYNAVADSTAAGMDVITDFQRGTDRLDLRPVLGDT 236
>gi|149633275|ref|XP_001509119.1| PREDICTED: similar to type I interstitial collagenase
[Ornithorhynchus anatinus]
Length = 465
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 63/193 (32%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W I Y+ T H D+ + A WSKV LTF + +DI
Sbjct: 106 WDKTEITYRIVKYTRHLSKADVDM-------AIKKAFQVWSKVSPLTFTKVWKEEADIMI 158
Query: 82 -ISSNNGYVCTPRYDSRY------------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
S + Y +P Y +I+FD+ + W L A HEI
Sbjct: 159 SFFSGDHYDNSPFYGPDGVLAHAFPPGKLIGGDIHFDEDETWT-KSHLNYNLFLVAAHEI 217
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H +MS P S MD DI
Sbjct: 218 GHALGLAHSQDIGA-------------------LMS---PVYSYMDID---PFKLPQDDI 252
Query: 189 VAVQKIYGAPKGS 201
+QKIYG K
Sbjct: 253 DGIQKIYGPSKSP 265
>gi|298291987|ref|YP_003693926.1| Hemolysin-type calcium-binding region [Starkeya novella DSM 506]
gi|296928498|gb|ADH89307.1| Hemolysin-type calcium-binding region [Starkeya novella DSM 506]
Length = 984
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 69/225 (30%), Gaps = 27/225 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G D +D + D+ ++ GG+ + IAQ
Sbjct: 614 NDMLAGGEGADTLIGGDGVDTIDYSGSNAAVGLGLTDVPGQATQGSGGHAQGDIIAQ--- 670
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+V+GS+ ND + G++ N GND G G D + + + V
Sbjct: 671 IENVIGSAFNDTLQGSAGANRLEGGGGNDTLRGQGGADVLIGGLGTDTASYSSSASGVTV 730
Query: 328 YDANEHKQ---------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D LS +E L + + L+ + L+ +G D
Sbjct: 731 AISATATTVGSGGDAQGDQLSGIENLTGSAFADVLTGSDGDNRLDGGGGNDRLVGGLGVD 790
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
D+ Y S + ++ +A
Sbjct: 791 TLVGGD-------------GVDTVDYSASNAGVVVQLSANPASAT 822
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 61/201 (30%), Gaps = 20/201 (9%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTE 248
+Q GA + G + + G D + GV I
Sbjct: 682 TLQGSAGANRLEGG----GGNDTLRGQGGADVLIGGLGTDTASYSSSASGVTVAISATAT 737
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S G + + Q + IE++ GS+ DV+ G+ +N GND G G+DT
Sbjct: 738 TVGSGGDAQGD----QLSGIENLTGSAFADVLTGSDGDNRLDGGGGNDRLVGGLGVDTLV 793
Query: 309 YYAPSYLYKIYRFENAIIVY-----------DANEHKQDFLSDVERLRFADQCIDSVNVK 357
++V D L+ +E + ++
Sbjct: 794 GGDGVDTVDYSASNAGVVVQLSANPASATVGSGGHAAGDILNTIESIIGSNFTDTLFGST 853
Query: 358 QRSILEYTASYEDLIQVIGQD 378
+ L A + + G D
Sbjct: 854 AGNKLVSGAGNDVMRGGSGAD 874
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 44/137 (32%), Gaps = 9/137 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYI------DLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGN 277
G+DLLD G I L + N + + + GN
Sbjct: 302 GDGNDLLD--GGEGNDQLIASIGDDTLRGGGGNDWLNASLGNDLLYGGDGDDDLNAGDGN 359
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G + N+V SGND+ G +G D F + + + D
Sbjct: 360 DQLHGEAGNDVLLGGSGNDIMSGGAGDDRFDGGTGADQLEGGDGFDTADYSAGGAVGIDL 419
Query: 338 LSDVERLRFADQCIDSV 354
L++V A S+
Sbjct: 420 LANVASGAAAGDTFSSI 436
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 1/139 (0%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
D ++ G + + ++++G G+D + G +++ GND+ DG G
Sbjct: 254 DAVAGGADTLDGGSGDDRLFGGGGADNLIGGFGHDQLYGGQGDDLLTSGDGNDLLDGGEG 313
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + + + N+ D + L D +L
Sbjct: 314 NDQLIASIGDDTLRGGGGNDWLNASLGNDLLYGGDGD-DDLNAGDGNDQLHGEAGNDVLL 372
Query: 364 YTASYEDLIQVIGQDVFES 382
+ + + G D F+
Sbjct: 373 GGSGNDIMSGGAGDDRFDG 391
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 3/151 (1%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ T+ G D +D + + L+ S+ G + IES++GS+
Sbjct: 788 GVDTLVGGDGVDTVDYS-ASNAGVVVQLSANPASATVGSGGHAAGDILNTIESIIGSNFT 846
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFF--YYAPSYLYKIYRFENAIIVYDANEHKQ 335
D + G++A N +GNDV G SG D LY + D +
Sbjct: 847 DTLFGSTAGNKLVSGAGNDVMRGGSGADLLVANGSGSKTLYGDGIADGGTAGADVFQIMG 906
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ D ++S++ ++L ++
Sbjct: 907 GTNVIADYQSGEDILLNSLSGAALTLLPGSS 937
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 58/162 (35%), Gaps = 13/162 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D D + G V IDL S + +I E+++GS +D++ G++
Sbjct: 401 GDGFDTADYSAGGAVG--IDLLANVASGAAAGDTFSSI------EALIGSVADDILAGDN 452
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-----QDFLS 339
ANN F G D+ G G DT Y + I +A A D L
Sbjct: 453 ANNSFQGGGGADLIVGQGGFDTSDYSTSAAGVTIQLNSSAADPQAAGTGTGGDAEGDSLI 512
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ER+ + + + A + L G D E
Sbjct: 513 SIERIIGSAFVDTLLGGELADTFVGGAGADVLNGNGGVDTAE 554
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 37/115 (32%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE++ GS ND++ GN +N GND G++G D + + ++
Sbjct: 187 IENLTGSGKNDILSGNGLDNQLVGMLGNDTLRGNNGNDLLIGDTITDVDGNGIPDDDDGD 246
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + L L ++ L G D+ S
Sbjct: 247 GIPDGVNDAVAGGADTLDGGSGDDRLFGGGGADNLIGGFGHDQLYGGQGDDLLTS 301
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 11/173 (6%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
P Q I + G+D++++T G + ++ S G + +++ +
Sbjct: 52 PTYQLISRTNGNDVVEVTSSGRFEVRGLAGNDTISVRAGTTGGDLLVGGDGNDTLTAAES 111
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFFYYAPSYLYKIYRF--ENAI 325
+DV+ G + + +GNDV G +G DT Y + S I
Sbjct: 112 DDVLDGGAGTDRLNGGAGNDVLIGGAGGDTLTGGDGVDTAVYSSSSAAVIISLNLDPQKS 171
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D L +E L + + + L + L G D
Sbjct: 172 TRGAGGDATGDTLLGIENLTGSGKNDILSGNGLDNQLVGMLGNDTLRGNNGND 224
>gi|237731510|ref|ZP_04561991.1| heme peroxidase [Citrobacter sp. 30_2]
gi|226907049|gb|EEH92967.1| heme peroxidase [Citrobacter sp. 30_2]
Length = 1777
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 65/214 (30%), Gaps = 21/214 (9%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---------GVKNYIDLNTE 248
+ + + + T+ D G+ + LT G L
Sbjct: 1420 NGATSATYTPGQAMVGRTLQVVVTVVDDEGNPPVVLTSTTTQPVGDLIVGTNGANTLVGT 1479
Query: 249 SWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+WS I G N T+ + ++G +GND + G + ++ +GND DG G D+
Sbjct: 1480 AWSDILRGEGGNDTLLGGAGDDLLIGGAGNDNLSGQAGQDILQGDAGNDTLDGGLGADSM 1539
Query: 308 FYYAPSYLYKIYRFE--------NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQ 358
Y + F V N D +VE L F
Sbjct: 1540 TGGTGDDTYIVDDFGDVVIEGVNGGTDVVRTNLSSYDLTDNVEELVFTGSGSFIGTGNAI 1599
Query: 359 RSILEYTASYEDLIQVIGQDV--FESMKHFYEFG 390
+ + + L + G D F + G
Sbjct: 1600 ANTITGGTGNDYLFGMGGNDQLFGGIGNDFLDGG 1633
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 64/175 (36%), Gaps = 16/175 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ TI G+D L +GG + G N + +
Sbjct: 1591 SFIGTGNAIANTITGGTGNDYL--FGMGGNDQ-----------LFGGIGNDFLDGGDGAD 1637
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIV 327
++ G GNDV+IG + + SG+D+ +G G D A S ++ ++ I
Sbjct: 1638 NLQGGVGNDVMIGGAGADTLSGGSGDDILNGQEGNDILDGGAGSDIFAFGANFGQDRITG 1697
Query: 328 YDAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D+N QDFL V A SV++ + D I ++G +
Sbjct: 1698 FDSNPNGGQDFLDLVLLGINAGNFASSVSITGNNGNTIVTIGTDTITLVGVNSTT 1752
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 58/187 (31%), Gaps = 20/187 (10%)
Query: 199 KGSLGNNIY-----------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G G++ Y + + YD D ++ + G ++I
Sbjct: 1540 TGGTGDDTYIVDDFGDVVIEGVNGGTDVVRTNLSSYDL--TDNVEELVFTGSGSFIGTGN 1597
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++I G N + + + G GND + G + GNDV G +G DT
Sbjct: 1598 AIANTITGGTGNDYLFGMGGNDQLFGGIGNDFLDGGDGADNLQGGVGNDVMIGGAGADTL 1657
Query: 308 FYYAPSYL-------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + + + I QD ++ + Q + + +
Sbjct: 1658 SGGSGDDILNGQEGNDILDGGAGSDIFAFGANFGQDRITGFDSNPNGGQDFLDLVLLGIN 1717
Query: 361 ILEYTAS 367
+ +S
Sbjct: 1718 AGNFASS 1724
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 44/161 (27%), Gaps = 27/161 (16%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG-- 276
++ GDD++ T + G + I + V G SG
Sbjct: 878 ADVVHGGDGDDIITDTGTPVGDADF---------LHGDAGHDVIFSGNGNDLVFGGSGSD 928
Query: 277 ----------------NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
ND +G S + + G+D +G G DT +
Sbjct: 929 FVVVGEDAQEVFSGQDNDFALGGSGGDFLMGNEGDDWLEGGDGFDTLAGDNSELFFNSTI 988
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ ++ N+ D + + + + +
Sbjct: 989 IGHDVLNGQGNDTDYDGEAGDDIMVQGAGIQRNNGMAGFDW 1029
Score = 42.0 bits (97), Expect = 0.37, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 54/190 (28%), Gaps = 10/190 (5%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G+ I + GG+D L +GG + + + ++
Sbjct: 1458 TTTQPVGDLIVGTNGANTLVGTAWSDILRGEGGNDTL----LGGAGDDLLIGGAGNDNLS 1513
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV-FFESSGNDVFDG-SSGLDTFFYYAP 312
G + +++ G G D + G + ++ + G+ V +G + G D
Sbjct: 1514 GQAGQDILQGDAGNDTLDGGLGADSMTGGTGDDTYIVDDFGDVVIEGVNGGTDVVRT--N 1571
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y + ++ + + + + L + L
Sbjct: 1572 LSSYDLTDNVEELVFTGSGSFIGTGNAIANTITGGTGNDYLFGMGGNDQLFGGIGNDFLD 1631
Query: 373 QVIGQDVFES 382
G D +
Sbjct: 1632 GGDGADNLQG 1641
>gi|74212952|dbj|BAE33415.1| unnamed protein product [Mus musculus]
Length = 473
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|126352554|ref|NP_001075316.1| interstitial collagenase precursor [Equus caballus]
gi|8469206|sp|Q9XSZ5|MMP1_HORSE RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Flags: Precursor
gi|5020116|gb|AAD38030.1|AF148882_1 matrix metalloproteinase 1 precursor [Equus caballus]
Length = 469
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 66/208 (31%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A+ +L + W N + Y+ + T D+ + A WS V
Sbjct: 94 VPDVAEFVLTEGNPRWENTHLTYRIENYTPDLPRADV-------DQAIEKAFQLWSNVSP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPRIGGDAHFDEDETWTSN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE GH+LGL H Y N YF D +
Sbjct: 207 F-RNYNLYRVAAHEFGHSLGLSHSTDIGA--------LMYPN---------YFFTGDVQL 248
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG +
Sbjct: 249 SQ----------DDINGIQAIYGPSQNP 266
>gi|329848646|ref|ZP_08263674.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843709|gb|EGF93278.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1425
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/237 (18%), Positives = 77/237 (32%), Gaps = 21/237 (8%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQ 220
S S T M D +YG GN+ + I
Sbjct: 502 SLDGRSGSDTLTGGTNANTLMGGDDA--DALYG----QAGNDTLSGGVGDDTLDGGTGID 555
Query: 221 TIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSS 275
++ G D+L T G G L + + + G + + +I+ ++S+ G
Sbjct: 556 SLLGGDGADVLTDTAGGSLMQGEAGNDTLTGGTGADDLSGGDGHDSISGEGHVDSLYGGD 615
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-------Y 328
GND + G ++V + GND +G +G D A + + ++V +
Sbjct: 616 GNDTLFGGDGDDVIYGGEGNDGINGGAGDDFLQGEAGNDSVGYFDALAGVVVDLSGAFPH 675
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D LS E + +D + + L A + L G D+
Sbjct: 676 ATGGAGNDTLSGFENVLGSDFADTLIGDDGENRLTGNAGNDSLAGGGGNDMLRGWGD 732
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 36/109 (33%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T G N L T + G + ++ +++ G +GND + G S+N+
Sbjct: 37 TYEGTDGNDTYLGTGGNDVVSGVGGDDFLSGGNGADTLNGGTGNDSLQGGSSNDSLTGGD 96
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
GND DG +G D A D L E
Sbjct: 97 GNDNLDGGTGNDYLNGDGGVTAGADTLNGGIGNDTLAFSGGGDTLDGGE 145
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 18/126 (14%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G D L ++L + S +I T +E+++GS+ D +
Sbjct: 763 ILGDAGIDTLTYANAS-QGVTVNLFVGTGSD--------SI---TGVENLIGSAYMDDLT 810
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA------NEHKQ 335
GN+++N G D G G DT + + + + IV +
Sbjct: 811 GNASDNRIEGGDGTDRLAGGDGNDTLTGGSGADETLMGWDGDDQIVTEGVSGTGYGGEGN 870
Query: 336 DFLSDV 341
D L+ V
Sbjct: 871 DTLTGV 876
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 9/184 (4%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSI 253
G+ NN + GDD D + + +SS+
Sbjct: 1238 TGNSLNNTLTGNAGNNLLDGGAGADKLIGGLGDDTYYVDHVQDNVQELHFQGTDAVFSSV 1297
Query: 254 G----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G T + G+S N+ + GNS NN GND+ G G D F +
Sbjct: 1298 SYSLFGRAVEAMTLTGTANINATGNSLNNSLTGNSGNNRLDGGVGNDILTGGDGADVFLF 1357
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ + F +++ + + + ++ AS
Sbjct: 1358 LGGTWKDTVSDFSAVQNDSIDIHAYTGGVANAGLVNQSGANVLITLGGGNTVTVLNASQA 1417
Query: 370 DLIQ 373
D++
Sbjct: 1418 DVLA 1421
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 5/166 (3%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ + + G D + I L + GG +M E++ GSS
Sbjct: 1014 AGYNDYLDGGDGIDTISYADAT-SGVTISLALSGQQTTGGVSYDMLNGF----ENLTGSS 1068
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
ND + G+++ NV +G D G G DT++ + E ++ + +
Sbjct: 1069 FNDKLTGDASANVIDGGAGGDRMVGGLGNDTYYVDNVADSVGENHLEGTDTIFASVSYSL 1128
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + +IL + L G DV +
Sbjct: 1129 VGRAVESLTLTGTGKLTGTGNSLNNILNGNSGNNTLDGAAGNDVLD 1174
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 53/189 (28%), Gaps = 13/189 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-----SWSSIG 254
G G+++ + V G DL+ + N N S
Sbjct: 231 GGAGDDVISVSVGNSSMSG------GDGADLMTGSGYSVTGNGGKGNDTIVGFAGTHSFS 284
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N ++ ++ + G SGND + G + F G D+ DG G D +
Sbjct: 285 GDDGNDSLIGGDDLDFLSGGSGNDTLFGGGYEDYFSSEEGVDLIDGGDGSDHIRFSFMRD 344
Query: 315 LY--KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ A L +ER+ + + D
Sbjct: 345 STVNSVFDMIQAATAEGFTLANGTVLRSIERIDLYFGSGNDTFIGNAYYAHVYGGIGDDW 404
Query: 373 QVIGQDVFE 381
G +
Sbjct: 405 MQAGSGSDD 413
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 46/159 (28%), Gaps = 7/159 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D +L G + + +++ G + + +++ G G+D + G + +
Sbjct: 497 DNYTRSLDGRSGSDTLTGGTNANTLMGGDDADALYGQAGNDTLSGGVGDDTLDGGTGIDS 556
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLR 345
G DV ++G A + + D +S V+ L
Sbjct: 557 LLGGDGADVLTDTAGGSLMQGEAGNDTLT----GGTGADDLSGGDGHDSISGEGHVDSLY 612
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D ++ + + G D +
Sbjct: 613 GGDGNDTLFGGDGDDVIYGGEGNDGINGGAGDDFLQGEA 651
Score = 44.3 bits (103), Expect = 0.074, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 14/160 (8%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ G D + + D N +GG + + T+ + + S GN +
Sbjct: 190 VWTGAGSDSFVGSAREDWVSTGDGNDTVTGGVGG-DSSDTLDGGAGDDVISVSVGNSSMS 248
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G ++ S + +G G DT +A ++ + + D L
Sbjct: 249 GGDGADLMTGSGYSVTGNGGKGNDTIVGFAGTHSFS-------------GDDGNDSLIGG 295
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ L F + + +Y +S E + + G D +
Sbjct: 296 DDLDFLSGGSGNDTLFGGGYEDYFSSEEGVDLIDGGDGSD 335
Score = 42.0 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 47/176 (26%), Gaps = 34/176 (19%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D L + ++ G + T+ + G++GND + G
Sbjct: 679 GAGNDTLS----------------GFENVLGSDFADTLIGDDGENRLTGNAGNDSLAGGG 722
Query: 285 ANNVFFESSGNDVFDGSSGLDTFF------------------YYAPSYLYKIYRFENAII 326
N++ ND G G D+ A +
Sbjct: 723 GNDMLRGWGDNDTLIGGDGTDSLIGGDGDDLLDGGDGYDVILGDAGIDTLTYANASQGVT 782
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
V D ++ VE L + D + +E + L G D
Sbjct: 783 VNLFVGTGSDSITGVENLIGSAYMDDLTGNASDNRIEGGDGTDRLAGGDGNDTLTG 838
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 28/96 (29%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + + N T + V G G+D + S ++ GND G G
Sbjct: 370 LRSIERIDLYFGSGNDTFIGNAYYAHVYGGIGDDWMQAGSGSDDLHGEEGNDTLIGGDGW 429
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ L + I Y D +S
Sbjct: 430 GRLDGWDGDDLLMSASSYDRIHNYIYAGSGNDTVSF 465
>gi|188584260|ref|YP_001927705.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
gi|179347758|gb|ACB83170.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
Length = 782
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 10/124 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ GY + I + + G GND + G N+ GND G +G DT A
Sbjct: 224 TFFGYGGDDWIDGGRGDDKLFGGLGNDTLSGGDGNDALDGGEGNDTLSGGNGSDTLDGGA 283
Query: 312 PSYLY----------KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ +Y A+ + D L+ +E L F D + +
Sbjct: 284 GTDRAVFAGRSQDYVALYGATGALALKHLASGSIDTLTSIETLTFDDTVLGVPGLLAHLQ 343
Query: 362 LEYT 365
Y
Sbjct: 344 QRYG 347
>gi|37726915|gb|AAO63001.1| stromelysin 3 [Necturus maculosus]
Length = 203
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 71/215 (33%), Gaps = 47/215 (21%)
Query: 58 ALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFM-------------EIN 103
AL WS V LTF E + +DI + + +D + +++
Sbjct: 1 ALQVWSDVTSLTFTEVNEGRADIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVH 60
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FD + W G GT L A HE GH LGL H S S+M
Sbjct: 61 FDYDETWTIGNDLGTDLLQVAAHEFGHVLGLQHS-------------------SVAKSLM 101
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG--APKGSLGNNIYKIEVQQKDSPFIQ- 220
S F +F Y + D +Q +YG P + + Y E++ + ++
Sbjct: 102 SPF--------YTFRYPLSLSEDDRQGIQHLYGGRRPTPTPALDYYHPEIETNEIGNLEP 153
Query: 221 --TIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSS 252
D + L Y+ L S
Sbjct: 154 DACDVDFDAISTIRGELFFFKSQYVWRLRGGKLQS 188
>gi|114570455|ref|YP_757135.1| putative outer membrane adhesin-like protein [Maricaulis maris
MCS10]
gi|114340917|gb|ABI66197.1| putative outer membrane adhesin like proteiin [Maricaulis maris
MCS10]
Length = 1963
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 16/157 (10%)
Query: 225 SGGDDLL------DLTLIGGVKNYID-------LNTESWSS-IGGYEKNMTIAQHTVIES 270
G+D++ D L G + I LN + I G N ++ +
Sbjct: 95 GSGNDVISGGRGRDFVLGGSGDDQISGGRGGDTLNGGDGNDVIDGGAGNDRVSGDAGDDF 154
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G D ++G +++ +G D G G DT Y ++ N V A
Sbjct: 155 LSGGAGRDTLLGGDGDDILSGGAGRDTIIGGQGHDTLVYGGSVRDAQVTGDSNQAEVRGA 214
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+D L VE ++F D + ++E A+
Sbjct: 215 --DGRDTLEGVEAIQFDDGTVYLDGRNNGPMVEDQAA 249
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 16/170 (9%)
Query: 226 GGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
GGDD++ D L G + I + + + G N I+ + V+G SG+D
Sbjct: 60 GGDDVISGGGGHDFVLGGAGDDDISGDAGND-FLSGGSGNDVISGGRGRDFVLGGSGDDQ 118
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HK 334
+ G + GNDV DG +G D A + ++ D ++
Sbjct: 119 ISGGRGGDTLNGGDGNDVIDGGAGNDRVSGDAGDDFLSGGAGRDTLLGGDGDDILSGGAG 178
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+D + + + + + + ++ ++ G+D E ++
Sbjct: 179 RDTIIGGQGH----DTLVYGGSVRDAQVTGDSNQAEVRGADGRDTLEGVE 224
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 29/161 (18%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G DL G + ID + I G + I+ + V+G +G+D + G+
Sbjct: 28 DIDGSGRGDLLFGTGRDDIIDGRGGND-LILGLGGDDVISGGGGHDFVLGGAGDDDISGD 86
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ N+ SGNDV G G D + R + + D N+
Sbjct: 87 AGNDFLSGGSGNDVISGGRGRDFVLGGSGDDQISGGRGGDTLNGGDGND----------- 135
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+++ A + + G D
Sbjct: 136 -----------------VIDGGAGNDRVSGDAGDDFLSGGA 159
>gi|296434219|ref|NP_001171780.1| matrix metallopeptidase 19-like [Saccoglossus kowalevskii]
Length = 505
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 78/248 (31%), Gaps = 51/248 (20%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+T+ R + L + W + YK T ++ A WS V
Sbjct: 104 FTSYRSKRYALAGRKWDRTNLTYKFVNFTPDLAIV-------EQKKTIEQAFAAWSDVTP 156
Query: 68 LTFEET-------------SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
L+F E +HSD K + + F + +FD + +
Sbjct: 157 LSFTEVFDGRPDILLEFSSGVHSDGKNAAFDGPGGVLAHAYYPQFGDAHFDDDEYFTVRT 216
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A HE GH+LGL H + +M F
Sbjct: 217 SDGVNLLFTAAHEFGHSLGLAHSSVSDA-------------------LMYPF-----YQG 252
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSL----GNNIYKIEVQQKDSP-FIQTIYDSGGDD 229
+ + T DI +Q IYG P + G + + ++ P T D+ D
Sbjct: 253 YNPDFALT--EDDIRGIQAIYGVPDATHPDEPGVDADGMTMETHSIPDICNTNIDTIFMD 310
Query: 230 LLDLTLIG 237
D+T +
Sbjct: 311 YDDVTFVT 318
>gi|109097139|ref|XP_001111542.1| PREDICTED: matrix metalloproteinase-19 isoform 1 [Macaca mulatta]
Length = 485
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 54/158 (34%), Gaps = 38/158 (24%)
Query: 51 AQEVARWALGEWSKVVDLTFEET-SIHSDIKFIS-SNNGYVCTPRYDSRY---------- 98
A+ R A +WS V LTF E + +DI+ C+ +D
Sbjct: 102 ARAALRQAFQDWSNVAPLTFREVQAGGADIRLSFHGRQSLYCSNSFDGPGRVLAHADIPE 161
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
++FD+ + W G +G L A HE+GHALGL H
Sbjct: 162 LGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLGHSR-------------------- 201
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
Y + + + D+ +Q +YG
Sbjct: 202 ------YSQALMAPVYQGYQPHFKLHPDDVAGIQALYG 233
>gi|326664684|ref|XP_700781.5| PREDICTED: matrix metalloproteinase-16 [Danio rerio]
Length = 589
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 59/209 (28%), Gaps = 55/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS- 74
+ L Q W I Y +T N + R A W V L FE
Sbjct: 91 YALTGQKWQREHISYSIKNVTPKVG-------NQETHDAIRRAFDVWQGVTPLRFEAVPF 143
Query: 75 -------------------IHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 144 RDLDSGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 203
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H +M+ F
Sbjct: 204 PNHDGNDLFLVAVHELGHALGLEHSSDPTA-------------------IMAPFYQYMDT 244
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ D+ +QKIYG P +
Sbjct: 245 ESFKLPH------DDLQGIQKIYGPPNKN 267
>gi|254563923|ref|YP_003071018.1| hypothetical protein METDI5608 [Methylobacterium extorquens DM4]
gi|254271201|emb|CAX27213.1| hypothetical protein METDI5608 [Methylobacterium extorquens DM4]
Length = 781
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 81/266 (30%), Gaps = 43/266 (16%)
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALG-LMHPGS--------YNGGYPVYGVDNDYE 154
F G HEIGH LG L P + +NG +
Sbjct: 106 FYDPTGVAAAPGNRFDAFTIFQHEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPVV 165
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-DIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D V + +D M + + D+ +Q + ++
Sbjct: 166 LDGARAHV---WGSEDLMDPYLGWGQRSYISDLDLAMLQDKGMPISTERADKMW------ 216
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T + GGDD +D G + + ++++G
Sbjct: 217 -LGNRADTFFAYGGDDWID----------------------GGWGDDKLFGGAGNDTLIG 253
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANE 332
+ GND + G + ++ +G D DG G+D S Y +Y ++ V
Sbjct: 254 ADGNDALDGGAGDDTLIGGNGGDTLDGGEGIDRAVLTGRSQDYVALYGAAGSLAVKHLGS 313
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQ 358
D L+ +E L F D + +
Sbjct: 314 GSIDTLTSIETLNFDDTVLGMSGLLA 339
>gi|166368790|ref|YP_001661063.1| hemolysin-type calcium-binding region protein [Microcystis
aeruginosa NIES-843]
gi|166091163|dbj|BAG05871.1| hemolysin-type calcium-binding region protein [Microcystis
aeruginosa NIES-843]
Length = 894
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 10/187 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G++ Y + S T YD+ G + + I ES++ G +
Sbjct: 134 NGGAGSDSYAADYSYGSSGLTMT-YDTAGSGTITVGTETDTFTSI----ESFNGFKGTDY 188
Query: 259 NMTIAQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I T + E++ G SGND + GN+ + + +GNDV +G G D + +
Sbjct: 189 NDVIFGGTRVYYYETLYGGSGNDTISGNAGGDYIYGENGNDVLNGGDGYDDLYGGNGNDT 248
Query: 316 YKIYRFENAIIVYDANEHKQD--FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ D L+D + + D + + + ++ +D+IQ
Sbjct: 249 LQGTDGGTGEYDDLVGGSGNDRFILADTTKTFYDDGLTATEGTSDYATIADFSTIDDIIQ 308
Query: 374 VIGQDVF 380
+ G
Sbjct: 309 LRGSSSD 315
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 54/142 (38%), Gaps = 10/142 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G+ + + I++ G + D+ G Y W ++ G
Sbjct: 4 NTATGSGTITVGTETDTFTSIESFDGFKGTEYNDVIFGGTASEY-------WGALSGGGG 56
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI+ + + + G +GNDV+ G ++ + GNDV +G +G D + +
Sbjct: 57 NDTISGNAGFDYIYGENGNDVLNGGDDSDYLYGGDGNDVLNGGAGSDNILGGNGND---L 113
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ + +E D ++
Sbjct: 114 LNGDAGDDYFTGDEGDNDTING 135
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 63/199 (31%), Gaps = 27/199 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQT-----IYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+ ++G + F T I+ + GG + I N +
Sbjct: 8 GSGTITVGTETDTFTSIESFDGFKGTEYNDVIFGGTASEYWGALSGGGGNDTISGNAG-F 66
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG------- 303
I G N + + + G GNDV+ G + ++ +GND+ +G +G
Sbjct: 67 DYIYGENGNDVLNGGDDSDYLYGGDGNDVLNGGAGSDNILGGNGNDLLNGDAGDDYFTGD 126
Query: 304 ---LDTFFYYAPSYLYKI-YRFENAIIVYDANEHK---------QDFLSDVERLR-FADQ 349
DT A S Y Y + ++ + + D + +E F
Sbjct: 127 EGDNDTINGGAGSDSYAADYSYGSSGLTMTYDTAGSGTITVGTETDTFTSIESFNGFKGT 186
Query: 350 CIDSVNVKQRSILEYTASY 368
+ V + Y Y
Sbjct: 187 DYNDVIFGGTRVYYYETLY 205
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T + G++GN+ + GNS NN +G D G G DTF + +
Sbjct: 720 GTNNINGTGNAGNNKITGNSGNNQINGRAGIDTLTGGLGADTFIFQFGQ---STISTSDR 776
Query: 325 IIVYDANEHKQDFLS 339
I + N K D L+
Sbjct: 777 ITDFAINSDKIDLLT 791
Score = 44.0 bits (102), Expect = 0.092, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 3/123 (2%)
Query: 272 VGSSGNDVVIGNSANN---VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G+ NDV+ G +A+ GND G++G D + + + + +
Sbjct: 31 KGTEYNDVIFGGTASEYWGALSGGGGNDTISGNAGFDYIYGENGNDVLNGGDDSDYLYGG 90
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D N+ L + + + + + G D + + +
Sbjct: 91 DGNDVLNGGAGSDNILGGNGNDLLNGDAGDDYFTGDEGDNDTINGGAGSDSYAADYSYGS 150
Query: 389 FGL 391
GL
Sbjct: 151 SGL 153
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN+ NN +SGN+ +G +G+DT + + ++ I D DF +
Sbjct: 727 TGNAGNNKITGNSGNNQINGRAGIDTLTGGLGADTFIFQFGQSTISTSDR---ITDFAIN 783
Query: 341 VERLRFADQCIDSVNVKQR 359
+++ Q ++
Sbjct: 784 SDKIDLLTQGGLPMSAPSS 802
>gi|40063620|gb|AAR38409.1| type I secretion target GGXGXDXXX repeat protein [uncultured marine
bacterium 582]
Length = 2447
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYE 257
G LG+++Y ++ + T SGG D + + + N +L ++I G
Sbjct: 467 SGGLGDDVYIVDNASD----VVTEAASGGTDEVRSSVTLTLETNVENLTLTGAANIAGTG 522
Query: 258 K--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I ++ ++ G SGND + G S N+ + SGND DG G DT + +
Sbjct: 523 NSLNNVITGNSGNNTLYGGSGNDTLYGGSGNDTLYGGSGNDRIDGGEGNDTIDGGSGDDI 582
Query: 316 YKIYRFENAIIVYDANEH-KQDFLSDVERLRFADQCIDSVNV 356
+ + II ++ DFL +E++ D + +
Sbjct: 583 FDASSGADTIIGGRGDDTYCVDFLGPIEQVSIEDSKLVEGHS 624
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ T + + G GND + G++ N+ +GND DG +G DT +
Sbjct: 1583 LDGGNGNDTLDGGTGDDELYGGFGNDRLDGSTGNDSLNGGNGNDRLDGGTGNDTLEGGSG 1642
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-EYTASYEDL 371
+ +Y + +N ++ A+E D + D V ++ +S +
Sbjct: 1643 NDIY-VVDTKNDVVTEKADEGGDDIVVAEVDYNLGDHVEHLVLTGTANLKGTGNSSGNGM 1701
Query: 372 IQVIGQDVFESMK 384
G + +
Sbjct: 1702 AGNAGDNQLNGLG 1714
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 33/216 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQK-----------DSPFIQTIYDSGGDDLLD-----LTLIGGV 239
GA G+ + +Y T+ G+D LD L GG
Sbjct: 330 GATGGAWNDTVYGGAGNDSLGGGDGADRLYGGSGADTLDGGTGNDTLDGGSGDDQLYGGA 389
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N I + + + G N + +++ G G D + G + ++ + +D
Sbjct: 390 GNDILVASVGDDTHYGGAGNDILGGGVGADTLDGGIGKDTLFGGTGDDTLSGGADDDALV 449
Query: 300 GSSGLDTFFYYAPSYLYKIYRFEN-------AIIVYDANEHKQDFL---------SDVER 343
G SG+DT + ++ + +V +A D + ++VE
Sbjct: 450 GGSGVDTLDGGSGIDTMSGGLGDDVYIVDNASDVVTEAASGGTDEVRSSVTLTLETNVEN 509
Query: 344 LRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQD 378
L + +++ + L G D
Sbjct: 510 LTLTGAANIAGTGNSLNNVITGNSGNNTLYGGSGND 545
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 11/185 (5%)
Query: 203 GNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ +Y + + +Y G+D ++ GG Y S +
Sbjct: 163 DDTLYGGSGNDSLTGNSGLNQLYGGDGNDTIE-AYYGGNTVY----GGSGADAVNDIALD 217
Query: 261 TIAQHTVIESVVGSSGN--DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ +SVVGS+ N D V G S ++ D G G DT + +
Sbjct: 218 VVYGGDGNDSVVGSAYNFADTVYGGSGDDNLDGGGVADKLSGGDGNDTLYGGTGNDSLTG 277
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N I D N+ + + + DS+ ++ + ++ G
Sbjct: 278 NSGRNQIYGGDGNDTIEAYFGG--NTVYGGSGADSIYNIAVDVVYGGDGNDTVVGATGGA 335
Query: 379 VFESM 383
+++
Sbjct: 336 WNDTV 340
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 16/174 (9%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ D+ I+ G+DL++ L S+ G N T++ T +S
Sbjct: 1918 TKGNDTAINDIIHAYAGNDLVNAGLGND-------------SVDGGLGNDTLSGQTGDDS 1964
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GND ++G+ + + GND+ G +G DT + Y + + +
Sbjct: 1965 LYGGQGNDSLVGDGGQDHLYGGDGNDLLIGGAGKDTLKGGDGNDTYVVDSSTDDKVT--- 2021
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D + + D + + + G D +K
Sbjct: 2022 DSSGTDEIQSSVQYTLLDASGVENLTLTGTNDSWGTGNVKANVITGNDGNNMLK 2075
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 15/131 (11%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ + +S+ G SG+D ++G S +++ + SGND G SG DT + +
Sbjct: 1251 GSAGNNTLEGGSGDDSLYGGSGDDSLVGGSGDDLIYGGSGNDTIVGGSGDDTIVGGSGAD 1310
Query: 315 L---------------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
++ + + D +S VE + D+ +
Sbjct: 1311 TIDGGDGTDTYTTTGAIQVSVDGSGSGTVVKADGTTDSVSSVEAYTGSAGTGDTFSFSDT 1370
Query: 360 SILEYTASYED 370
T + D
Sbjct: 1371 ITDRGTIANLD 1381
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 60/175 (34%), Gaps = 9/175 (5%)
Query: 204 NNIYK-IEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTESWSSIGG 255
+ +Y + ++ G+D + T+ GG N + G
Sbjct: 73 DTVYGGAGADSIYDTALDLVFGGSGNDTVVGTAYDHADTVYGGSGNDSLSGGGGADQLSG 132
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N T+ + +++ G G D + G S ++ + SGND G+SGL+ + +
Sbjct: 133 GDGNDTLYGGSGNDNLGGGGGADKLTGGSGDDTLYGGSGNDSLTGNSGLNQLYGGDGNDT 192
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ Y N + + D DV + + Y S +D
Sbjct: 193 IEAYYGGNTVYGGSGADAVNDIALDV-VYGGDGNDSVVGSAYNFADTVYGGSGDD 246
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 78/238 (32%), Gaps = 25/238 (10%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIV-----AVQKIYGAPKGSLGNNIYK--------IEVQ 212
F +FG P +SD++ Q + GA + + G++ + E
Sbjct: 1388 FTADGGGSTIAFGGSNQPTLSDLLNGTNGVTQVLAGAFEITGGDDTGEIGGIRFQAFETI 1447
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T +GG D L + N ++ + S + G + ++ T + +
Sbjct: 1448 SFKVSATSTSTATGGSDKL---VGSAGNNTLEGGSGDDS-LYGGSGDDSLVGGTGDDLIY 1503
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G + +G+D+ G SG DT + + ++ I N+
Sbjct: 1504 GGAGNDTLEGGCGEDSLVGGTGDDLVYGGSGDDTLEGGSGADTIGGGDGDDTIAGGADND 1563
Query: 333 -----HKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D L +RL + L + L G D
Sbjct: 1564 SLYGGNGDDSLVGGIGKDRLDGGNGNDTLDGGTGDDELYGGFGNDRLDGSTGNDSLNG 1621
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 19/152 (12%)
Query: 199 KGSLGNNIYKIEVQQKD------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
KG GN+ Y ++ D S T+ D+ G + L LT ++
Sbjct: 2002 KGGDGNDTYVVDSSTDDKVTDSSGTDEIQSSVQYTLLDASGVENLTLTGTNDSWGTGNVK 2061
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ I G + N + +++ G+ G+D + G + +GND+ G +G+DT
Sbjct: 2062 A---NVITGNDGNNMLKGLKGTDTLAGAKGDDSLEGGDGTDSLVGGAGNDLMSGGNGMDT 2118
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
F A I F+ A DA+ DF+
Sbjct: 2119 FAEVAGDGSDTISDFKEA----DADGKGGDFI 2146
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 53/190 (27%), Gaps = 15/190 (7%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSS- 252
+ +Y + G+D L +GG L S
Sbjct: 106 YDHADTVYGGSGNDSLSGGGGADQLSGGDGNDTLYGGSGNDNLGGGGGADKLTGGSGDDT 165
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND--------VFDGSSGL 304
+ G N ++ ++ + + G GND + N + SG D V G G
Sbjct: 166 LYGGSGNDSLTGNSGLNQLYGGDGNDTIEAYYGGNTVYGGSGADAVNDIALDVVYGGDGN 225
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D+ A ++ +Y + + D + DS+ Y
Sbjct: 226 DSVVGSAYNFADTVYGGSGDDNLDGGGVADKLSGGDGNDTLYGGTGNDSLTGNSGRNQIY 285
Query: 365 TASYEDLIQV 374
D I+
Sbjct: 286 GGDGNDTIEA 295
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 13/159 (8%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ +++ ++ +I G N T+ +++ G +GND + + + +G
Sbjct: 21 TRAQTQRIVNIGSQGNDNISGSSGNDTLIGGYGRDTIYGGAGNDKIQSYDDRDTVYGGAG 80
Query: 295 NDVFD--------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ER 343
D G SG DT A + +Y + + D LS +
Sbjct: 81 ADSIYDTALDLVFGGSGNDTVVGTAYDHADTVY--GGSGNDSLSGGGGADQLSGGDGNDT 138
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L + L + + L G D
Sbjct: 139 LYGGSGNDNLGGGGGADKLTGGSGDDTLYGGSGNDSLTG 177
>gi|238797466|ref|ZP_04640965.1| serine protease [Yersinia mollaretii ATCC 43969]
gi|238718737|gb|EEQ10554.1| serine protease [Yersinia mollaretii ATCC 43969]
Length = 1817
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 10/161 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA--QHTVIESV 271
K T+ GG+D+L G KN+I + G + + A Q ++I
Sbjct: 670 KGGNGNSTLVGGGGNDVLSG---GRGKNHIVGGSGKAVIYAGPQGDNIYASEQGSII--- 723
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-- 329
G D + GN N+V G+ + DG G++ + Y + R EN V D
Sbjct: 724 HAGGGVDRIFGNKRNDVIVAGKGDALIDGGGGINVVVLHGSYADYTLTRTENGYQVKDKV 783
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A L ++++L FAD + L Y D
Sbjct: 784 AGRDGTLTLKNIQKLDFADISAVDLGANTIIPLNDILIYGD 824
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 26/177 (14%)
Query: 193 KIYGAPKGSLGNNIY----KIEVQQKDSPFIQTIYDS-----GGDDLLDLTLIGGVKNYI 243
+++G P ++ Y + K SP +++D+ GG + L++ I G
Sbjct: 1405 RLFGNPVSR--DDTYFYTDEFATLVKKSPTRASLHDAIDGVAGGRNTLNMAAISG-DVRA 1461
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L T S G +T+ I +++ GND++ ++V G +V +G SG
Sbjct: 1462 NLLTGKASLGGEL---LTLHSPESIHNLISGDGNDILTAGRESSVLDGGRGLNVLEGGSG 1518
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ F + I +DA D ++ + FA++ ++ +KQ
Sbjct: 1519 NEVFVVRKRADGID------WIANFDA-----DKREVIQLVGFAEKRFGALQLKQEG 1564
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 50/140 (35%), Gaps = 5/140 (3%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T ++ +G + +++ A + ++ G + +D + + A + G++ + G +G D
Sbjct: 551 TTAYIQLGNKKASLS-ADELAVNNIYGGNQDDTLTASKAGSWLAGRGGSNTYKGGAGNDV 609
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSDVERLRFADQCIDSVNVKQRSI-L 362
F A I V + + S + + D V+ R + +
Sbjct: 610 FVISASDVPSHIQGNGGRDTVLISGDKGVALNMARSGITLAQGGDGDDIIVSGGDRGVFI 669
Query: 363 EYTASYEDLIQVIGQDVFES 382
+ L+ G DV
Sbjct: 670 KGGNGNSTLVGGGGNDVLSG 689
>gi|209528338|ref|ZP_03276793.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491229|gb|EDZ91629.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 674
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 22/159 (13%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ A+Q G +G+ + + +I G+D L +GG + I
Sbjct: 276 VTAIQGR-GGNDTLVGD---QFDQTLDGGTGNDSILGGSGNDTL----LGGPGDDI---- 323
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N + + + G G+D + G+ ++ F ++GND G +G D F
Sbjct: 324 -----LFGGPGNDLLYGGADNDILYGGKGDDFLSGDDGDDTLFGNAGNDTLFGGAGNDVF 378
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
Y + S + ++ D L D E F
Sbjct: 379 AYISRSQITT-----GTDLILDFTPGSDRLLFDREEFGF 412
>gi|1706912|sp|P55126|FRPA_NEIMC RecName: Full=Iron-regulated protein frpA
gi|150255|gb|AAA25454.1| iron-regulated protein [Neisseria meningitidis]
Length = 1115
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 84/281 (29%), Gaps = 59/281 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-----------TILSHN 123
+D + N Y+ Y F + V+ Y G T
Sbjct: 767 DGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLT 826
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCAT 182
E H L ++DS +V SYF S +
Sbjct: 827 FTREGNHLL------------------IKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDN 868
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+++ + + G++ Y+ +Y + G+DLL+
Sbjct: 869 GKVLDVATVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN------- 919
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
G N +I +++ G GND + G + N+ GND +
Sbjct: 920 ---------------GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLN 964
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G DT A + + + + QD + +
Sbjct: 965 GEDGNDTLIGGAGNDYLEGGSGSDTYVF--GEGFGQDTVYN 1003
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 64/217 (29%), Gaps = 53/217 (24%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y +A+
Sbjct: 899 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDAL---- 954
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFY 387
D L+ + + LI G D E Y
Sbjct: 955 NGGEGNDHLNGED------------------------GNDTLIGGAGNDYLEGGSGSDTY 990
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG----------------- 430
FG G+D ++ ++ D + G AA H+I G
Sbjct: 991 VFGEGFGQDTVYN--YHVDKNSDTMHFKGF--KAADVHFIRSGSDLVLSASEQDNVRISG 1046
Query: 431 --VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
E D F + S+ D +LVQ
Sbjct: 1047 FFYGENHRVDTFVFDDAAISNPDFAKYINAGNNLVQS 1083
Score = 37.4 bits (85), Expect = 8.5, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 17/131 (12%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ T+A ++ G+ +D++ NV F + N G+ G DT
Sbjct: 720 AGKFEDYQKVLGQETVA---LLAKTSGTQADDILQ-----NVGFGHNKNVSLYGNDGNDT 771
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-------LRFADQCIDSVNVKQR 359
A + + + + QD + + + +RF D + R
Sbjct: 772 LIGGAGNDYLEGGSGSDTYVF--GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTR 829
Query: 360 SILEYTASYED 370
+D
Sbjct: 830 EGNHLLIKAKD 840
>gi|320103847|ref|YP_004179438.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
gi|319751129|gb|ADV62889.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
Length = 555
Score = 77.5 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 67/213 (31%), Gaps = 11/213 (5%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSS-IGGYEKNMTIAQH 265
I+ G DL+DLT G L S + G N +A
Sbjct: 243 NGGGAVNFNIFTGAGSDLVDLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGG 302
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++G GND + G + + F G+D G G D + N I
Sbjct: 303 AGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDIL-FGGDGNDI 361
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ S + L D + + ++ + G ++ ++ +
Sbjct: 362 LFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNILDAGRD 421
Query: 386 FYEFGLS--EGRDITFDSYLYLGSYDDLRNVFG 416
+ +G I + Y G+ +D R V G
Sbjct: 422 GIHETIRVGDGNTIVYVHRPYFGNAED-RAVVG 453
>gi|259155266|ref|NP_001158874.1| Matrix metalloproteinase-25 [Salmo salar]
gi|223647796|gb|ACN10656.1| Matrix metalloproteinase-25 precursor [Salmo salar]
Length = 584
Score = 77.5 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 77/218 (35%), Gaps = 53/218 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEE-- 72
+ L W + + V + S + +P+ + + A WS V L+F +
Sbjct: 115 YALSGLRWDRTDLTWS--VHSYPNPSRSTSVFHPDMVEGILTLAFKAWSDVTPLSFRQLS 172
Query: 73 ------TSIHSDIKFISS----NNGYVCTPRYDS---RYFM-------EINFDKADVWRY 112
DI+ + ++GY R + +F + +FD + W Y
Sbjct: 173 GSDREDKGPGGDIRVSFTRSLHDDGYPFDGRGGTLAHAFFPGRDDVAGDTHFDDDEYWSY 232
Query: 113 GIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G + L A+HE GHALGL H S Y + + SY +P
Sbjct: 233 GGDSSSIDLFTVAVHEFGHALGLSHSSSDPSIMRPYYQGAVED-------ISSYNLP--- 282
Query: 172 MMDASFGYCATPMVSDIVAVQKIYG----APKGSLGNN 205
+ D +A+Q++YG P G++
Sbjct: 283 -------------LDDRMAIQELYGRKKSKPTVHHGDS 307
>gi|170737362|ref|YP_001778622.1| hemolysin-type calcium-binding region [Burkholderia cenocepacia
MC0-3]
gi|169819550|gb|ACA94132.1| Hemolysin-type calcium-binding region [Burkholderia cenocepacia
MC0-3]
Length = 1532
Score = 77.5 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 78/233 (33%), Gaps = 15/233 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLL-DLTLIGGVKNYIDLNTES 249
G + + GN + + + TI+ GDD+L T K +
Sbjct: 857 GDDELNGGNGHDALSGETGNDKIFGGAGNDTIWGGDGDDILVGFTASNDAKQSLAAWETD 916
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+I G N I + + G +GND + G ++ + GND G G D +
Sbjct: 917 DDTIYGGAGNDLILGGLGNDLLHGEAGNDEIQGGDGHDKLYGGDGNDRLFGQVGNDILYG 976
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A L + +N D + L + + L+ A +
Sbjct: 977 GAGDDLLVGFTGDNEAKRTLGPGETDD-----DYLYGGEGNDTLLGGLGDDYLDGGAGAD 1031
Query: 370 DLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYL--GSYDDLRNVFGSD 418
+ G D + S+ +EG D S Y+ + ++LR V G +
Sbjct: 1032 HMEGGEGNDTYIVNSVNDVVLEYANEGYDTVISSANYILNANIEELRLVEGFN 1084
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 25/187 (13%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLN------TESWSSI-GGYEKNMTIAQHTVIESVVGS 274
+ + G+D+ D ++ID N + + GG +N + T +++ G
Sbjct: 579 LIGTDGNDVFDANYYAAYGHWIDSNLLVNFLAGDGNDMMGGSSRNDNLWGGTGNDTLFGY 638
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G ++ +GNDV DG G D F + + + ++ ++ + A+
Sbjct: 639 DGDDRLYGEEGDDELNGGAGNDVLDGGIGNDKLFGHVGNDIMNGGDGDDIMLGFTASNDS 698
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLS 392
+ L+ E I+ A + + +G D + F G
Sbjct: 699 KQTLAWGE--------------TDDDIMYGGAGNDRMWGGVGHDYMDGGDGADFVSGG-- 742
Query: 393 EGRDITF 399
+G D F
Sbjct: 743 DGNDTVF 749
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + V G GND V G + N+ +GND G +G D F A
Sbjct: 723 GGVGHDYMDGGDGADFVSGGDGNDTVFGGAGNDELHGDAGNDRLLGEAGNDRIFGEAGDD 782
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ ++ ++ + A+ + LS E +D + ++ +
Sbjct: 783 VLWGGDGDDVLVGFTASNDAKQTLSWGE----SDNDMLYGGNGNDALYGGLGN 831
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-YYA 311
+ G + N T+ + + G +GND ++G + N+ F +G+DV G G D + A
Sbjct: 739 VSGGDGNDTVFGGAGNDELHGDAGNDRLLGEAGNDRIFGEAGDDVLWGGDGDDVLVGFTA 798
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + + + D L
Sbjct: 799 SNDAKQTLSWGESDNDMLYGGNGNDALYG 827
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----YRFENAIIVY 328
G++ ++ +IGN NNV +GND+ G G DT+ + S I N+ ++
Sbjct: 1377 GNALDNTIIGNRGNNVLDGGAGNDILIGGLGNDTYRFGRGSGCDTIRDDDETLGNSDVIS 1436
Query: 329 DANEHKQDFL 338
D L
Sbjct: 1437 IGAGVSADQL 1446
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 10/112 (8%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN+ +N + GN+V DG +G D + Y+ R + D D
Sbjct: 1376 TGNALDNTIIGNRGNNVLDGGAGNDILIGGLGNDTYRFGRGSGCDTIRD----------D 1425
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E L +D V + + I ++G +++ +Y
Sbjct: 1426 DETLGNSDVISIGAGVSADQLWFRHVGNDLEISILGTGDTATVRDWYLGSRY 1477
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++ ++ ++GNSA+N+ +G D G G DT++ + E V
Sbjct: 1086 NGTGNALDNRIVGNSADNILDGVTGADTMIGGKGNDTYYVDNVGDRVVEFAGEGIDTVQS 1145
Query: 330 ANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + ++ L F V+ + Y + E
Sbjct: 1146 KISYTLGEHVENLNLLDFGKPEKGLVDGVAVHVYGYPKANE 1186
>gi|308389520|gb|ADO31840.1| iron-regulated protein FrpC [Neisseria meningitidis alpha710]
Length = 1629
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 77/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 953 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1010
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1011 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1048
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1049 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1106
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1107 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1154
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1153 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1210
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 1211 GSTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 1248
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1249 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1306
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1307 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1354
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1353 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1410
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1411 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1448
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1449 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1506
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1507 GKGFGQDTVYN 1517
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1413 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 1472
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1473 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1532
Query: 390 GLS 392
+
Sbjct: 1533 KAA 1535
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 860 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 919
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 920 YATGRKDIIRFTDGITAD 937
>gi|209527360|ref|ZP_03275868.1| allergen V5/TPX-1 related [Arthrospira maxima CS-328]
gi|209492218|gb|EDZ92565.1| allergen V5/TPX-1 related [Arthrospira maxima CS-328]
Length = 496
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 64/182 (35%), Gaps = 13/182 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVV 272
+ ++IY GG+D + +GG N + + + G E N I +++
Sbjct: 213 GTSMAESIYGRGGNDTI--FGMGGDDNL----EGGFGNNLLWGGEGNDFILGGPGNDTLY 266
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D ++G N+V + GND DG G D F L I +Y
Sbjct: 267 GGQGDDFLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDL--ILGGFGNNTIYGGQG 324
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL---IQVIGQDVFESMKHFYEF 389
+ D L F +Q D + Q + Y D I + F
Sbjct: 325 NDTIHGGDGNDLIFGNQGADYLQGNQGNDTIYGGQDNDTLLGIAGNNLLLGNLGNDFLVG 384
Query: 390 GL 391
GL
Sbjct: 385 GL 386
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 66/212 (31%), Gaps = 15/212 (7%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
IYG + I+ + ++ G+D + + TL GG + L
Sbjct: 220 IYGRGGN---DTIFGMGGDDNLEGGFGNNLLWGGEGNDFILGGPGNDTLYGGQGDDFLLG 276
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E I G N TI + + G G+D+++G NN + GND G G D
Sbjct: 277 GEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDLILGGFGNNTIYGGQGNDTIHGGDGND- 335
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ Y N I + ++ L V + L
Sbjct: 336 LIFGNQGADYLQGNQGNDTIYGGQDNDTLLGIAGNNLLLGNLGNDFLVGGLESDTLYGGQ 395
Query: 367 SYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
+ LI G D + G GRD
Sbjct: 396 GNDTLIGGDGDDFLSGDKGNDLLIGGA--GRD 425
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
N IY I+ + G D L + T+ GG N L + + G
Sbjct: 317 NTIYGGQGNDTIHGGDGNDLIFGNQGADYLQGNQGNDTIYGGQDNDTLLGIAGNNLLLGN 376
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + +++ G GND +IG ++ GND+ G +G DTF
Sbjct: 377 LGNDFLVGGLESDTLYGGQGNDTLIGGDGDDFLSGDKGNDLLIGGAGRDTFAIAYGQDT 435
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 43/184 (23%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGY 256
+ +Y + I+ G+D +D + GG + + L ++I G
Sbjct: 263 DTLYGGQGDDFLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDLILGGFGNNTIYGG 322
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNV---------------------------- 288
+ N TI + + G+ G D + GN N+
Sbjct: 323 QGNDTIHGGDGNDLIFGNQGADYLQGNQGNDTIYGGQDNDTLLGIAGNNLLLGNLGNDFL 382
Query: 289 --------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ GND G G D + L + + + D
Sbjct: 383 VGGLESDTLYGGQGNDTLIGGDGDDFLSGDKGNDLLIGGAGRDTFAIAYGQDTIADLEVG 442
Query: 341 VERL 344
V+++
Sbjct: 443 VDQI 446
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 50/163 (30%), Gaps = 13/163 (7%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I++ E+ + G E + ++ ES+ G GND + G ++ GN++ G
Sbjct: 195 INVTEET---LEGTEADDFKVGTSMAESIYGRGGNDTIFGMGGDDNLEGGFGNNLLWGGE 251
Query: 303 GLDTF--------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
G D Y + + N +I D D + + + +
Sbjct: 252 GNDFILGGPGNDTLYGGQGDDFLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDLIL 311
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGR 395
+ + + + G D+ + +
Sbjct: 312 GGFGNNTIYGGQGNDTIHGGDGNDLIFGNQGADYLQGNQGNDT 354
>gi|284051005|ref|ZP_06381215.1| FG-GAP [Arthrospira platensis str. Paraca]
Length = 693
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 200 GSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
G GN+ + + P +I G+D L D TL G N L S +
Sbjct: 286 GRDGNDTLIGDQFDQTLDGGPGNDSILGGSGNDTLLGGPGDDTLFGQGGNDR-LQAGSGN 344
Query: 252 SI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G N T+ +S+ G G+D++ S +N+ +GND G G ++ F
Sbjct: 345 NLLYGGVGNDTLLGGVGNDSLFGGLGDDLLQAGSGDNILDGGAGNDTLLGGIGNNSLFGG 404
Query: 311 APSYLYKIYRFENAI 325
+ N +
Sbjct: 405 EGNDCLSGGGGNNWL 419
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 73/220 (33%), Gaps = 18/220 (8%)
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS---GGDDLLDLTL---- 235
P+ D+++ +K+ ++GN ++ I D+ GG D TL
Sbjct: 211 PLPPDLISDEKV----ITNIGNVNNGSATILPGGVGVEFIPDTTSLGGFGSFDYTLRDRH 266
Query: 236 --IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
I+ +++ G + N T+ +++ G GND ++G S N+
Sbjct: 267 NQFATATATINFRP--VTAMQGRDGNDTLIGDQFDQTLDGGPGNDSILGGSGNDTLLGGP 324
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D G G D + + L + ++ N+ L D + L+
Sbjct: 325 GDDTLFGQGGNDRLQAGSGNNLLYGGVGNDTLLGGVGNDSLFGGLGD-DLLQAGSGDNIL 383
Query: 354 VNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGL 391
L L G D ++ E G
Sbjct: 384 DGGAGNDTLLGGIGNNSLFGGEGNDCLSGGGGNNWLEGGA 423
>gi|326914434|ref|XP_003203530.1| PREDICTED: matrix metalloproteinase-27-like [Meleagris gallopavo]
Length = 472
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 70/215 (32%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
KP + + + W + Y+ T D+ + + A WS
Sbjct: 94 KPRCGVPDVGLYGVTLPGWKKNNLTYRTVNYTPDMSKEDVDK-------AIQKAFKVWST 146
Query: 65 VVDLTFEETSIH-SDIKFISSNNGYVCTPRY--------------DSRYFMEINFDKADV 109
V L F +DI + PRY S + +++FD+ +
Sbjct: 147 VTPLIFTRIQEGIADIMIAFGRKAHGHCPRYFDGPLGVLAHAFPPGSGFGGDVHFDEDED 206
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMP 168
W G G L A HE+GHALGL H +P Y Y P
Sbjct: 207 WTTGSD-GFNLFLVAAHEVGHALGLSHSNDQRALMFPNYA----------------YTSP 249
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ + +P DI +Q IYG+ + G
Sbjct: 250 SE--------FPLSP--DDISGIQSIYGSATKTPG 274
>gi|325133898|gb|EGC56554.1| Iron-regulated protein frpC [Neisseria meningitidis M13399]
Length = 1102
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 50/281 (17%), Positives = 85/281 (30%), Gaps = 59/281 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-----------TILSHN 123
+D + N Y+ Y F + V+ Y G T
Sbjct: 754 DGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLT 813
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCAT 182
E H L ++DS +V SYF S +
Sbjct: 814 FTREGNHLL------------------IKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDN 855
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+++ + + G++ Y+ +Y + GDDLL+
Sbjct: 856 GKVLDVATVKEL--VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN------- 906
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
G N +I +++ G GND + G + N+V GND +
Sbjct: 907 ---------------GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLN 951
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G DT A + + + + QD + +
Sbjct: 952 GEDGNDTLIGGAGNDYLEGGSGSDTYVF--GKGFGQDTVYN 990
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 63/217 (29%), Gaps = 53/217 (24%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y
Sbjct: 886 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGY---------- 935
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFY 387
+ D L+ E L + LI G D E Y
Sbjct: 936 ---NGNDVLNGGE---------------GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTY 977
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG----------------- 430
FG G+D ++ ++ D + G AA H+I G
Sbjct: 978 VFGKGFGQDTVYN--YHVDKNSDTMHFKGF--KAADVHFIRSGSDLVLSASEQDNVRISG 1033
Query: 431 --VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
E D F + S+ D +LVQ
Sbjct: 1034 FFYGENHRVDTFVFDDAAISNPDFAKYINAGNNLVQS 1070
Score = 37.0 bits (84), Expect = 9.8, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 17/131 (12%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ T+A ++ G+ +D++ NV F + N G+ G DT
Sbjct: 707 AGKFEDYQKVLGQETVA---LLAKTSGTQADDILQ-----NVGFGHNKNVSLYGNDGNDT 758
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-------LRFADQCIDSVNVKQR 359
A + + + + QD + + + +RF D + R
Sbjct: 759 LIGGAGNDYLEGGSGSDTYVF--GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTR 816
Query: 360 SILEYTASYED 370
+D
Sbjct: 817 EGNHLLIKAKD 827
>gi|115667817|ref|XP_001176394.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
gi|115700136|ref|XP_001176086.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
Length = 595
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 66/200 (33%), Gaps = 50/200 (25%)
Query: 16 HLLRDQYW-SNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEET 73
++ W N + Y LT LN NA + R A W V LTF E
Sbjct: 170 YVTGGIAWPRNVAVTYSFGTLTND--------LNQNAIKNELRRAFQVWVDVSGLTFREV 221
Query: 74 --SIHSDIKFISSNNGYVCTPRYDSRYFM----------EINFDKADVWRYGIGKGTILS 121
S DI+ + + +D + + + +FD ++ W G GT L
Sbjct: 222 VDSSSVDIRIKFGSYEHGDGISFDGQGGVLAHAFLPRNGDAHFDDSESWTIGTNFGTNLF 281
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYC 180
A HE GH+LGL H ++M Y+ + +
Sbjct: 282 QVAAHEFGHSLGLYHSD-------------------VQAALMYPYYRGYNPNFNLDR--- 319
Query: 181 ATPMVSDIVAVQKIYGAPKG 200
DI + +YG G
Sbjct: 320 -----DDIAGITSLYGRNTG 334
>gi|27378825|ref|NP_770354.1| hypothetical protein bll3714 [Bradyrhizobium japonicum USDA 110]
gi|27351974|dbj|BAC48979.1| bll3714 [Bradyrhizobium japonicum USDA 110]
Length = 4128
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 58/167 (34%), Gaps = 8/167 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
GN ++ + G DL +G D T +S+ G N
Sbjct: 3474 TGNGNTRIAYAQAAAAVTVDLSLGTAHGTAGGDLANVGT-----DTITGGVNSVQGSNFN 3528
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ E G G+D + N+ +G D DG +G D Y PS Y I
Sbjct: 3529 DTLIGGGGNELFFGGGGSDTINAGGGNDQITGQAGADTIDGGAGTDMAIYTGPSSAYTIT 3588
Query: 320 RFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ ++ D L++VE L+F+D + + ++
Sbjct: 3589 TLAGGQIQVADSNSARDGTDVLTNVEVLQFSDVTTLLASGTAANPID 3635
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 90/297 (30%), Gaps = 56/297 (18%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY---GA 197
N D Y +++ + + +A Y DI + IY G+
Sbjct: 1793 NAVQGSMFDDTIYGSNNTAVT-------ETFTGNAGNDYIDGRGGFDIASYNNIYLSTGS 1845
Query: 198 PKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ G + + I+ I + D + T G + N +++ G
Sbjct: 1846 IAVNMAAGIVVGDSSIGTDTLRSIEGIQGTVNADTYNATGYGAAGAFNVGNNGTFNQFEG 1905
Query: 256 YEKNMTIAQH---------------------------------------TVIESVVGSSG 276
N I + T + SV GS+
Sbjct: 1906 LGGNDIITGNGNTRVIYANATAAVTVDLSLGTAHGTAAGDLAAIGTDSFTGVFSVTGSAF 1965
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA---IIVYDANEH 333
D +IG++ +++F + GND +G +G D Y Y I + A
Sbjct: 1966 ADTLIGSAGSDMFVGNGGNDQINGGAGGDIAIYSGTKTQYSISTDGAGHATVTDNVAGRD 2025
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG--QDVFESMKHFYE 388
D L++VE L+F + + + + ++ + + S + +
Sbjct: 2026 GTDTLTNVEALQFTNGTVLITSGSAANPVDLSDTRLYFNAATNPFTSATGSADDYVK 2082
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 9/137 (6%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + I+++ G GND + G ++ F +GND G++G D A
Sbjct: 1445 GTSGNDVLTGTAAIDTIDGREGNDQISGGDGADLLFGGAGNDRIAGNAGNDHIDGGAGFD 1504
Query: 315 LYKIYRFENAIIV------YDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYT 365
+ + D L ++E + FAD + I
Sbjct: 1505 RALYTDATGGVTINMAAGTASGAGVDSDTLVNIEGIVGSAFADTYDATGFTGVSGIPGSP 1564
Query: 366 ASYEDLIQVIGQDVFES 382
Y + G D
Sbjct: 1565 IGYNEFEGGGGDDSITG 1581
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++VG++G+D + G N+ GND DG G D Y + + +
Sbjct: 2951 NLVGTAGDDTIQGLGGNDKLQGLGGNDTLDGGQGFDRAIYTDATSAITVNLAAGTVT--- 3007
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
D L ++E + +D D++N A
Sbjct: 3008 -GGSGSDTLVNIEAIVGSD-FADTINTSGFLGDSGIAGNP 3045
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 13/195 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL---TLIGGVKNYIDLNTESWSSIGGY 256
G+ G++ TI GG+D ++L + N +LN +++
Sbjct: 2122 GTAGDDFVGFASNVNG----LTIDMGGGNDTVNLANGSNSVSASNIENLNGSDFATGSLS 2177
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY----YAP 312
+++ + SV ++G + + + N F D +G++ D+ Y+P
Sbjct: 2178 NDTLSLLNNVTGLSVNLANGINTLNLAAGANAFVNIFSVDTINGTASDDSLSIANGLYSP 2237
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERL--RFADQCIDSVNVKQRSILEYTASYED 370
+ I + +++ L +VE + A+ N + +++ D
Sbjct: 2238 NNDVSIDLGAGNDTLTVSSQFGGFALHNVEHMVVTSANAFYSLTNDQSGLAIDFGGGNSD 2297
Query: 371 LIQVIGQDVFESMKH 385
L G +
Sbjct: 2298 LQIAAGSNSLALTGL 2312
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 59/172 (34%), Gaps = 15/172 (8%)
Query: 225 SGGDDLLDLTLIGGVK-----NYIDLNTESWSSI--GGYEKNMTIAQHT---VIESVVGS 274
GGDD + T+ +Y+ + G + + ++ T I+SV GS
Sbjct: 1573 GGGDDSITGTVNAEGAFLTRVSYVSATAGVTVDLAAGTADGDASVGHDTFHGGIQSVWGS 1632
Query: 275 SGNDVVIGNS----ANNVFFESSGNDVFDGSSGLDTFFYYA-PSYLYKIYRFENAIIVYD 329
S +D++ G++ VF +GND FDG G D Y P+ I A V
Sbjct: 1633 SHDDILRGSNNGFGTVEVFSGFAGNDTFDGRGGFDRADYNQDPTTTSGITVHLAAGTVTG 1692
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D L +E +R + S + G +
Sbjct: 1693 DASVGTDTLISIEAVRGTNFADTYDATGFSGTSINAGSNGTFNEFTGGGGND 1744
Score = 44.3 bits (103), Expect = 0.065, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 61/203 (30%), Gaps = 27/203 (13%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI------GGYEKNMTIAQ 264
S ++ GG+D L+ G + L+ + S I G + TI
Sbjct: 3127 GSNNASGTVEIFDGRGGNDTLNGRG-GFDRADYALDPATASGITANMAAGTVTGDSTIGT 3185
Query: 265 HTV--IESVVGSSGNDVVIG------------NSANNVFFESSGNDVFDGSSGLDTFFYY 310
T+ IES+ G++ D N N F GND G+ F
Sbjct: 3186 DTLVSIESIRGTNFVDTYNAVGFSGSGVNPGSNGTFNEFNGMGGNDSITGNGNTRLAFVN 3245
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTAS 367
A + A D S V ++ F D + S N A
Sbjct: 3246 ATGG---VTVDIAAGTDSGDASTGSDTFSGVNAIQASMFDDTLLGSNNATGTETFTGLAG 3302
Query: 368 YEDLIQVIGQDVFESMKHFYEFG 390
+ + G D+ ++ G
Sbjct: 3303 NDYIDGRGGFDLASYNNIYFSTG 3325
>gi|194213562|ref|XP_001503575.2| PREDICTED: similar to olfactory receptor, family 51, subfamily L,
member 1 (predicted) [Equus caballus]
Length = 592
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 67/190 (35%), Gaps = 51/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W+ + + Y+ + +++ AL WS V L F+E S +DI
Sbjct: 99 WNKHTLTYRIINYPREMKRDTV-------KDIILDALSIWSNVTSLIFQEAKSQDADITL 151
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
++ P DS I+FDK + W KG L A+HE+
Sbjct: 152 SFWDLAHGDDWPFDGPGGILGHAFLPDSDAPGVIHFDKGEHWSNSY-KGFNLFLVAIHEL 210
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP--MVS 186
GH+LGL H GS N S+M + T V
Sbjct: 211 GHSLGLRHSGSQN-------------------SIM--------YPSYVYHDPRTFHLGVD 243
Query: 187 DIVAVQKIYG 196
DI +Q++YG
Sbjct: 244 DIQRIQQLYG 253
>gi|91776789|ref|YP_546545.1| hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
gi|91710776|gb|ABE50704.1| Hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
Length = 1286
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 49/153 (32%), Gaps = 13/153 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY------IDLNTESWSSIGGYEKNMTIA 263
T+ G++ LD L +Y D+ S+ G +
Sbjct: 427 NDIISAGAGNDTLIGGHGNNQLDGGLGNNTASYENMTIGQDVTASLISNTGTVSGGIASD 486
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ I+++ G +GND + GN N +GND G G DT
Sbjct: 487 TYANIQNLTGGAGNDFLTGNIVANRLIGGAGNDTLVGGGGADTLDGGDGVDTASFVDLAA 546
Query: 324 AIIVYDANEHKQD-------FLSDVERLRFADQ 349
+V DAN + L +E L D
Sbjct: 547 VNVVLDANGNGTGETASGNVTLLSIENLVGTDH 579
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 9/135 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ I + +S T+ G D + L V ID + SS+G
Sbjct: 795 GLSNIMAGDGTNTITIGNANS----TVTGGTGSDTVTYNLSTSVYANID-TGFAGSSLGT 849
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N + I+ + G SGND +IGN NN+ +GND G G DT + A +
Sbjct: 850 AQANRLVD----IDHLTGGSGNDTLIGNDGNNILRGGAGNDSIFGGGGNDTIYGGAGADT 905
Query: 316 YKIYRFENAIIVYDA 330
N + +
Sbjct: 906 IDGGTGNNTAVYTSS 920
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 80/444 (18%), Positives = 120/444 (27%), Gaps = 87/444 (19%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK--GSLGNNIYKIEVQQK 214
++ S Y +S G + DI + G G+ GNNI +
Sbjct: 827 TYNLSTSVYANIDTGFAGSSLGTAQANRLVDIDHLTGGSGNDTLIGNDGNNILRGGAGND 886
Query: 215 D---SPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSI--------GGYEK 258
TIY G D +D Y + L + G
Sbjct: 887 SIFGGGGNDTIYGGAGADTIDGGTGNNTAVYTSSVLVSLTDGLLRTTNTNGDVLGSGTIV 946
Query: 259 NMTIA-------------QHTVIESVVG----SSGNDVVIGNSANNVFFESSGNDVFDGS 301
N IA V+ ++ SG+ +IGNS N SGND +G
Sbjct: 947 NGGIAGRATGGSTASDEAFGDVLTNIQNLTVEGSGSSYLIGNSQANRLTGGSGNDTLEGI 1006
Query: 302 SGLDTFFYYAPSYLYKIY---------------------------RFENAIIVYDANEHK 334
G DT + S + N
Sbjct: 1007 GGGDTLDGGSGSGTDTATYVHASAGVKASLGATGLDSKAAAALAAAGGISANTGTINGLA 1066
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L +E L V S L + LI G D + ++G
Sbjct: 1067 SDTLISIENLTGTQYNDVLVARNGGSTLRGGNGNDTLIGGTGNDYLDGGDGNDVIYATQG 1126
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
RD + + D A+ Y + F +++ + ED +
Sbjct: 1127 RDTV------VAGAGNDTIHASVDESASGSAYN----------NRFTSIDGGSGEEDTLV 1170
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
PD + G GR D D+R+ G++ A +G
Sbjct: 1171 LTGFVPDANYSLSTLRTGSGAGGGRVSNIDII-------DIRD--GTNTNLAVDAATVNG 1221
Query: 515 VKEGRNPDAFKALEYIASHEDLIN 538
+K G N L A + D I
Sbjct: 1222 IKTGNNATTGSVLTIRADNGDDIT 1245
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 38/112 (33%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GND++ + N+ GN+ DG G +T Y + + + +
Sbjct: 421 IDGGDGNDIISAGAGNDTLIGGHGNNQLDGGLGNNTASYENMTIGQDVTASLISNTGTVS 480
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D ++++ L + L A + L+ G D +
Sbjct: 481 GGIASDTYANIQNLTGGAGNDFLTGNIVANRLIGGAGNDTLVGGGGADTLDG 532
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 64/175 (36%), Gaps = 17/175 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ ++ +++ V + +++ GG L +DL T + + I +
Sbjct: 576 GTDHDDTFQVSVLPSEVGGVKSGVIQGGAGTDSLVYNVAGNLNVDLQTGTVNGITDILDS 635
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
IE++ SGND+++ + N DG +G +T + + +
Sbjct: 636 --------IENITTGSGNDIIVATNGVNK---------IDGGAGNNTVDFIHATTGVSVN 678
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + D L +++ + + D++ V + +LI+
Sbjct: 679 IIDPTVETLISGGSGADILRNIQNINGSAAGNDTITVGNFDSTINARNGNNLIKA 733
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 4/151 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG-SSGNDVV-IG 282
+ G+D + + N + N + IA + +++ SGN+V+ G
Sbjct: 707 AAGNDTITVGNFDSTINARNGNNLIKAGTNTGSSTYNIAAGSGNDTIEALGSGNNVIDAG 766
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDV 341
N NN +GN+ +G DT N I + +AN SD
Sbjct: 767 NGNNN-IKAGNGNNTITTGNGNDTIVSGTGLSNIMAGDGTNTITIGNANSTVTGGTGSDT 825
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +++ TA L+
Sbjct: 826 VTYNLSTSVYANIDTGFAGSSLGTAQANRLV 856
>gi|170061521|ref|XP_001866269.1| interstitial collagenase [Culex quinquefasciatus]
gi|167879733|gb|EDS43116.1| interstitial collagenase [Culex quinquefasciatus]
Length = 485
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 66/198 (33%), Gaps = 47/198 (23%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
L WS I Y+ L +I + R A WS+V +L F E +
Sbjct: 107 ELTSQFKWSKSVISYRIMNYPVRVLQSEI-------RAAVRHAFDAWSRVTNLDFVEDTR 159
Query: 76 HSD----IKFISSNN---GYVCTPRYDSRYFMEINFDKADVWRYGI------GKGTILSH 122
D + F SN+ G C YDS + DV +
Sbjct: 160 TIDVDIQLAFEGSNHQRRGQPCRYSYDSTLAHAFFPEHGDVHFNTKYFFTEDTSIEQFIN 219
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HEIGH+LGL+H + S+M YF ++ A
Sbjct: 220 TATHEIGHSLGLLHS-------------------TSRDSIM-YFSQTSNLF-------AE 252
Query: 183 PMVSDIVAVQKIYGAPKG 200
P DI A+Q +YG
Sbjct: 253 PQPEDINAIQSLYGVRSS 270
>gi|302875938|ref|YP_003844571.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578795|gb|ADL52807.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 820
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 80/228 (35%), Gaps = 18/228 (7%)
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
NDS S Y + + S G T + ++I+ IYG + +NI + +
Sbjct: 532 NDSIRISNQFYGNSKIEVFKFSDG---TVLDNEILKTLTIYG---TASNDNISGTNLNEV 585
Query: 215 DSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
TIY SGGDD + G + + + G N TI + +
Sbjct: 586 IVAIEGNDTIYASGGDDTI-YCGAG--------HDGVYDGVYGGLGNDTIYGEGDNDRLS 636
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G D++ G ++ F G+D G SG D + + Y + + A IVY+ +
Sbjct: 637 GQEGADILDGGIGSDTLFGGVGDDKLIGGSGNDGLYGEGGNDTYIFNKGDGADIVYNVSS 696
Query: 333 -HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D + FA+ I N L T +
Sbjct: 697 LDNDDDRLLFNDVNFAEATITKSNADLIIKLNGTTDSVTVSGFFNYGK 744
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 18/158 (11%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
IYG P +NI + + TIY SGGDD + G + +
Sbjct: 368 IYGTPSN---DNISGTNLNEVIVAIEGNDTIYASGGDDTI-YCGAG--------HDGVYD 415
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N TI + + G G D++ G ++ F G+D G SG D +
Sbjct: 416 GVYGGLGNDTIYGEGDNDRLSGQEGADILDGGIGSDTLFGGVGDDKLIGGSGNDGLYGEG 475
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
S Y A D +D++ + F D
Sbjct: 476 GSDTYIFGSGFGA----DGISELDTVNTDIDTIEFVDG 509
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N E +S Y + + T+ ++ + S G D + G +V GND +G
Sbjct: 217 NNEFITSYYTYVTGSGVIEGTIGKNSIVGSIGEDKIYGYFGADVIDGKGGNDYLNGGIDG 276
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
DT+ + I ++ + D + + D
Sbjct: 277 DTYIFNIGYGTIVIDDYDETVGAIDTIKFGEGITID 312
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 46/141 (32%), Gaps = 5/141 (3%)
Query: 258 KNMTIAQHTVIES--VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ ++ VI+S + G+ ND + G + N V GND S G DT + A
Sbjct: 353 NDGSVFDKNVIDSLMIYGTPSNDNISGTNLNEVIVAIEGNDTIYASGGDDTIYCGAGHDG 412
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEYTASYEDLI 372
+ E D LS E D I L + + L
Sbjct: 413 VYDGVYGGLGNDTIYGEGDNDRLSGQEGADILDGGIGSDTLFGGVGDDKLIGGSGNDGLY 472
Query: 373 QVIGQDVFESMKHFYEFGLSE 393
G D + F G+SE
Sbjct: 473 GEGGSDTYIFGSGFGADGISE 493
>gi|224043580|ref|XP_002199979.1| PREDICTED: matrix metallopeptidase 27 [Taeniopygia guttata]
Length = 466
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 62/197 (31%), Gaps = 50/197 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T D+ + A WS V L F +DI
Sbjct: 106 WKKNKLTYRIVNYTPDMSKEDVDK-------AVEKAFKVWSAVTPLIFTRIHKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +++FD+ + W G G L A HE
Sbjct: 159 AFGTKVHGHCPRYFDGPLGVLAHAFPPGTGLGGDVHFDEDEDWTTGSA-GFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GHALGL H + +P Y Y P + + +P
Sbjct: 218 FGHALGLSHSNDQSALMFPNYA----------------YISPSE--------FPLSP--D 251
Query: 187 DIVAVQKIYGAPKGSLG 203
DI +Q IYG P +
Sbjct: 252 DISGIQSIYGPPTNASD 268
>gi|74222651|dbj|BAE42198.1| unnamed protein product [Mus musculus]
Length = 473
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
+ D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGANGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 258 DIRNIQSLYGAP 269
>gi|149925493|ref|ZP_01913757.1| hypothetical protein LMED105_04697 [Limnobacter sp. MED105]
gi|149825610|gb|EDM84818.1| hypothetical protein LMED105_04697 [Limnobacter sp. MED105]
Length = 940
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 66/188 (35%), Gaps = 13/188 (6%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y + D+ + A H+ G ++GR F A Y + D+
Sbjct: 672 VFDWDFYYDNNQDVVKA----KVDLATHWADDGFEKGRQGSPEFGASFYWHRYTDVQKLC 727
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFG-SDRGAAARHYITH 513
L H+ ++G E+GR F Y Y+ Y DLR FG + A H+ +
Sbjct: 728 KLGDRLCV--TRHWLDYGIEQGRQGSPNFSLYSYMARYSDLRRAFGEENYETAITHWFDN 785
Query: 514 GVK-EGRNPDAFKALEYIASHEDLINAFADA--PDLVQAGKDHFSNFGYEEGRSITFNPD 570
G + EGRN + + S D+ ++ + F GR +
Sbjct: 786 GEELEGRNASPTSSDKVEVSGPARAGGGGGGFWSDMATCKNEYVTGFRIGAGRVVDRVQF 845
Query: 571 LYLTSYDD 578
Y +
Sbjct: 846 RYPGGWAP 853
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 6/118 (5%)
Query: 328 YDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVI-GQDVFESMKH 385
YD N+ D+ D + Y Y D+ ++ D +H
Sbjct: 679 YDNNQDVVKAKVDLATHWADDGFEKGRQGSPEFGASFYWHRYTDVQKLCKLGDRLCVTRH 738
Query: 386 FYEFGLSEGR--DITFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVK-EGRNPDA 439
+ ++G+ +GR F Y Y+ Y DLR FG + A H+ +G + EGRN
Sbjct: 739 WLDYGIEQGRQGSPNFSLYSYMARYSDLRRAFGEENYETAITHWFDNGEELEGRNASP 796
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 20/182 (10%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
RN + + D NAF + F FD Y + D
Sbjct: 630 RNVASTSTNSVNKAFNDAGNAFKKLGKKKKHKPAPDPRFA-----ASVFDWDFYYDNNQD 684
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN--AFADAPDLVQAGK 551
+ + A H+ G ++GR F A Y + D+ D + +
Sbjct: 685 VVKA----KVDLATHWADDGFEKGRQGSPEFGASFYWHRYTDVQKLCKLGDRLCVTR--- 737
Query: 552 DHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFG-SDRSAAAQHYITHGMK-EGRALGI 607
H+ ++G E+GR S F+ Y+ Y DL FG + A H+ +G + EGR
Sbjct: 738 -HWLDYGIEQGRQGSPNFSLYSYMARYSDLRRAFGEENYETAITHWFDNGEELEGRNASP 796
Query: 608 SG 609
+
Sbjct: 797 TS 798
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F Y +++D++ A D H+++ G+E+GR S F Y Y D+
Sbjct: 673 FDWDFYYDNNQDVVKAKVD-------LATHWADDGFEKGRQGSPEFGASFYWHRYTDVQK 725
Query: 582 VFG-SDRSAAAQHYITHGMKEGR--ALGISGMQFKSVMN 617
+ DR +H++ +G+++GR + S + + +
Sbjct: 726 LCKLGDRLCVTRHWLDYGIEQGRQGSPNFSLYSYMARYS 764
>gi|110633148|ref|YP_673356.1| heme peroxidase [Mesorhizobium sp. BNC1]
gi|110284132|gb|ABG62191.1| Animal heme peroxidase [Chelativorans sp. BNC1]
Length = 2950
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 80/210 (38%), Gaps = 31/210 (14%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLI------------------GG 238
G GN+ Y + + P I SGG D + ++ G
Sbjct: 2193 GGAGNDTYLVNNGGDVVSEDPL--AIPGSGGIDTIISSVTRNLNNTAQVVGDVENLILTG 2250
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N L + I G N + ++++G++G+D + G + +++ +G+D+
Sbjct: 2251 SGNINGLGNGLDNIISGNSGNNILTGAGGADTLIGNAGDDDLRGGANDDILEGGAGSDLL 2310
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFEN--AIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G G+D + + Y N A + + D L+ +ERLRF D + +
Sbjct: 2311 NGQGGIDIAIFAGSAGDYSFSLGANGLATVTDLVGDGGTDTLTSIERLRFGDGPVLDIAS 2370
Query: 357 ------KQRSILEYTASYEDLIQVIGQDVF 380
+I+ + + +I G+DV
Sbjct: 2371 IANGIPDGPAIIFGSEGNDTIIGGPGEDVI 2400
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 52/152 (34%), Gaps = 6/152 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + + L ++S G +M ++ IE++ GS+ ND + GNS
Sbjct: 1949 GVDTVSYADAS-AAVTVTLGSQSPQDTVGAGNDMLVS----IENLTGSAFNDTLTGNSGA 2003
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
NV SG D G G DT+ + + ++ +VE L
Sbjct: 2004 NVIDGGSGQDAMAGGGGDDTYLVD-DAGDSVLEDEAGGTDTVRSSLAAYMLAENVENLVL 2062
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A D + L + L G D
Sbjct: 2063 AAGATDGTGNALDNRLTGNSGDNVLDGGAGVD 2094
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 12/160 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV- 267
+ I G D + GG Y+ ++ S + + ++
Sbjct: 1993 FNDTLTGNSGANVIDGGSGQDAM--AGGGGDDTYL-VDDAGDSVLEDEAGGTDTVRSSLA 2049
Query: 268 -------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+E++V ++G GN+ +N +SG++V DG +G+DT Y
Sbjct: 2050 AYMLAENVENLVLAAGATDGTGNALDNRLTGNSGDNVLDGGAGVDTVVLDGEVSDYDFV- 2108
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ A + + D L ++E + + V +
Sbjct: 2109 YAGANTIVTSPAGGSDTLVNIENVEIGGVVYNMVRGTNAA 2148
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + + ++V+G SG D++ G++ N+ +G D+ G +G DT F
Sbjct: 2698 TIMGLGGRDVVFAGSGDDNVMGGSGADMLYGDAGNDRILAGAGGDLVTGGAGNDTVFGQG 2757
Query: 312 PSY 314
Sbjct: 2758 GDD 2760
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 41/120 (34%), Gaps = 2/120 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D +I + ++ + GND +G +G+D + + I + +
Sbjct: 1050 GTEGDDTIISDFGDDALWGGGGNDRIEGGAGVDLIIGGSGDDIITDSGDTGDFIKGEDGD 1109
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
+ ++ L D + + + + ++ D + + E G
Sbjct: 1110 DVIANANGLDVLMGGDGKDVFLVGVDATEVFAGEGDDFVLGGADADFILGNEGDDWIEGG 1169
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + + +I + + G G+D + G + + +G D+ +G +G DT Y +
Sbjct: 1730 VQAGDGDNSITGLGGNDVINGGGGSDTLNGGAGMDTLKGGAGADIVNGQAGDDTIIYGSL 1789
Query: 313 SYLYKIYRFENAII--VYDANEHKQDFLS 339
I + + ++ D +
Sbjct: 1790 DGADMIDGGADHDTLRIVESAGGGNDTVQ 1818
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 15/154 (9%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DLT G +NYI IGG E + TI + G+D + G N+
Sbjct: 1027 DLTTTGPDENYIRFLGGEHVVIGGTEGDDTI---------ISDFGDDALWGGGGNDRIEG 1077
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFAD 348
+G D+ G SG D + + + +I AN + D L +
Sbjct: 1078 GAGVDLIIGGSGDDIITDSGDTGDFIKGEDGDDVI---ANANGLDVLMGGDGKDVFLVGV 1134
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + A + ++ G D E
Sbjct: 1135 DATEVFAGEGDDFVLGGADADFILGNEGDDWIEG 1168
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D LD++ IG DL T +E++V SGND + G++
Sbjct: 2781 GSGNDTLDMSAIG-ANITADLGTGFMGRGSVSSAASGSDTIWGVENIVTGSGNDTITGSN 2839
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
A NV +GND F F A + I F+ + +
Sbjct: 2840 AANVMDGGTGNDTF-------RFLSAAAADGDTIIGFQPGDKIDLSGMDA 2882
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Query: 269 ESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + GNDV+ G ++ +G D G +G D A + A ++
Sbjct: 1736 DNSITGLGGNDVINGGGGSDTLNGGAGMDTLKGGAGADIVNGQAGDDTIIYGSLDGADMI 1795
Query: 328 YDANEHKQDFLSDVER 343
+H D L VE
Sbjct: 1796 DGGADH--DTLRIVES 1809
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 60/200 (30%), Gaps = 30/200 (15%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
GS G+ Y + + + GG D L + L+ S ++
Sbjct: 2323 GSAGD--YSFSLGANGLATVTDLVGDGGTDTLTSIERLRFGDGPVLDIASIAN------- 2373
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG---SSGLDTFFYYAPSYLY 316
I I + GS GND +IG +V GND +G G D
Sbjct: 2374 -GIPDGPAI--IFGSEGNDTIIGGPGEDVIIGGPGNDTLNGSDVGDGDDNTTPGTQDDDT 2430
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I+ + + + D N + + YT Y++ + IG
Sbjct: 2431 FIWNVGDGFDTINGGMEGPN----------GDVFQIIGNAESETYRIYT--YDEAVARIG 2478
Query: 377 QDVFESMKHFYEFGLSEGRD 396
+ + EG D
Sbjct: 2479 FAGSDETEIIVT---REGED 2495
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 58/181 (32%), Gaps = 31/181 (17%)
Query: 225 SGGDDLLDLTLIGGVKNYIDL---NTESWSSIGGYEKNMTIAQHTVI------------- 268
G D L + ++L +S I E ++ + +
Sbjct: 1846 GNGTDTL--SYATPNAVTVNLLAGTATGFSYIRNVENVVSGDGNDTLLGNLADNLLDGAG 1903
Query: 269 --ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---------GLDTFFYYAPSYLYK 317
+++ G GND +IG + N++ + +G+D G G+DT Y
Sbjct: 1904 GDDTIRGGFGNDTLIGRAGNDLLYGEAGDDTLRGGDGDDRLDGGQGVDTVSY--ADASAA 1961
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + D D L +E L + ++++ + + + G
Sbjct: 1962 VTVTLGSQSPQDTVGAGNDMLVSIENLTGSAFNDTLTGNSGANVIDGGSGQDAMAGGGGD 2021
Query: 378 D 378
D
Sbjct: 2022 D 2022
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 49/161 (30%), Gaps = 8/161 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-------KNYIDLNTESWSSIGGYEKNM 260
+ + + I GDD++ + G + I N + G +
Sbjct: 1070 GGNDRIEGGAGVDLIIGGSGDDIITDSGDTGDFIKGEDGDDVI-ANANGLDVLMGGDGKD 1128
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
V G+D V+G + + + G+D +G G D +
Sbjct: 1129 VFLVGVDATEVFAGEGDDFVLGGADADFILGNEGDDWIEGGDGFDVLNGDNSELFFNSTI 1188
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ ++ NE+ D S + + + + + +
Sbjct: 1189 KGHDVLFAGENENDFDAESGDDIMVQGESVMRNEGMFGFDW 1229
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N S I G E+ + E+++G G DVV S ++ SG D+ G +G D
Sbjct: 2674 NPIGASVILGTEQADALTGTADGETIMGLGGRDVVFAGSGDDNVMGGSGADMLYGDAGND 2733
Query: 306 TFFYYAPSYLYKIYRFENAI 325
A L + +
Sbjct: 2734 RILAGAGGDLVTGGAGNDTV 2753
Score = 41.6 bits (96), Expect = 0.37, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 12/156 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN--SANNV 288
D ++ G N + +N S + G T+ + V G +G+D +I ++
Sbjct: 1736 DNSITGLGGNDV-INGGGGSDTLNGGAGMDTLKGGAGADIVNGQAGDDTIIYGSLDGADM 1794
Query: 289 FFESSGNDVF----DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ +D G DT I N V + D + + L
Sbjct: 1795 IDGGADHDTLRIVESAGGGNDTVQIGL--DGAGIITDVNGASVAGIESAQLDLGNGTDTL 1852
Query: 345 RFA--DQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+A + ++ + Y + E+++ G D
Sbjct: 1853 SYATPNAVTVNLLAGTATGFSYIRNVENVVSGDGND 1888
Score = 37.8 bits (86), Expect = 5.6, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 63/211 (29%), Gaps = 39/211 (18%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G+N+ + T+ G D G N I + S +
Sbjct: 2079 TGNSGDNV------LDGGAGVDTVVLDGEVSDYDFVYAG--ANTIVTSPAGGSDTLVNIE 2130
Query: 259 NMTIAQ-------HTVIESVVGSS-----GNDVVIGNSANN---------VFFESSGNDV 297
N+ I T + +G D+V+G + + + +GNDV
Sbjct: 2131 NVEIGGVVYNMVRGTNAANGIGGPVVGTDAADLVLGFNGADSLLGGGGDDLLVGGAGNDV 2190
Query: 298 FDGSSGLDTFFYYAPSYLYK------IYRFENAIIVYDANEHKQDF---LSDVERLRFAD 348
G +G DT+ + I+ + + + DVE L
Sbjct: 2191 MAGGAGNDTYLVNNGGDVVSEDPLAIPGSGGIDTIISSVTRNLNNTAQVVGDVENLILTG 2250
Query: 349 -QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
I+ + +I+ + L G D
Sbjct: 2251 SGNINGLGNGLDNIISGNSGNNILTGAGGAD 2281
>gi|91775702|ref|YP_545458.1| hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
gi|91709689|gb|ABE49617.1| Hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
Length = 744
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+ + + N+ID ++ + I G + N TI + + G +G+D +IG N
Sbjct: 15 GTSDSDIIIGNNLDNFIDGDSGNDIIIAG-DGNDTIFGGNGNDIIFGGNGDDFIIGGDGN 73
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDV 341
++ F GNDV D G + F + + + I D N+ D LS
Sbjct: 74 DIIFGGDGNDVIDAGDGNNVVFGGSGNDNIYAGAGNDTIFGGDGNDVIFAGDGDDLLSGG 133
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDL 371
E + + + + Y + +D+
Sbjct: 134 EGTDYIEGGGSTAGDETIDGNVYLVAPDDV 163
Score = 44.7 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 11/142 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVF 289
D DL+ ++ G + A + G+ IG + ++ F
Sbjct: 550 DHYFFNAGGTVADLSNARGNNGGTINNVVVDASGVTANGLTFEGNGNTQTFIGTTQDDRF 609
Query: 290 FESSGNDVFDGSSGLDTFFYYA------PSYLYKIYRFENAIIVYDA--NEHKQDFLSDV 341
+ G+D G SG DTF + ++ +EN + + DF S V
Sbjct: 610 ISNGGHDTLTGGSGSDTFVFGKIWTQTVTGDDDEVQWYENVGVDLTNADTDTITDFASGV 669
Query: 342 ERLRF-ADQCIDSVNVKQRSIL 362
+++ DQ V +++
Sbjct: 670 DKIELNTDQFASLVGFNAGNLV 691
Score = 44.3 bits (103), Expect = 0.063, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E V+GS G D V ++V + + GND+ G G D ++ I F + +
Sbjct: 411 EIVLGSDGVDYVTARLGDDVVYGNGGNDLLVGHGGADYLDGGEGDDIFLIGGFGSGVQGT 470
Query: 329 DANEH 333
+
Sbjct: 471 TSKAD 475
>gi|148692986|gb|EDL24933.1| matrix metallopeptidase 12 [Mus musculus]
Length = 462
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 100 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 152
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 153 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 211
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 212 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 246
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 247 DIRNIQSLYGAP 258
>gi|262401481|gb|ACY66641.1| matrix metalloproteinase 1 isoform 1 [Scylla paramamosain]
Length = 198
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 58/166 (34%), Gaps = 39/166 (23%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSI---HSDIKFISSNNG---------YVCTPRYD 95
N +E+A A W V DL F+ S H +++F +G Y
Sbjct: 8 NDVDREIA-AAFQVWEDVTDLQFQRASSGKVHIEVRFEKGEHGDGDPFDGPGGTLAHAYF 66
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
Y + +FD ++VW +GT L A HE GH+LGL H
Sbjct: 67 PIYGGDAHFDDSEVWTLRSNRGTNLFQVAAHEFGHSLGLSHSD----------------- 109
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+S+M+ F + DI +Q +YG
Sbjct: 110 --VRSSLMAPFYR-------GYESSFELDQDDIKGIQALYGKKTTR 146
>gi|260798406|ref|XP_002594191.1| hypothetical protein BRAFLDRAFT_174415 [Branchiostoma floridae]
gi|229279424|gb|EEN50202.1| hypothetical protein BRAFLDRAFT_174415 [Branchiostoma floridae]
Length = 420
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 47/195 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--- 72
+ ++ W + + Y+ T +F++ + A W++ LTF
Sbjct: 44 YAIQGSRWRKHDLTYRISAYTQDLPAFEV-------ESAVEKAFQVWARHTPLTFTRIYW 96
Query: 73 ----------TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
H D +G + +Y + +FD + W GT L
Sbjct: 97 GRPDLDVKFSVGEHGDGN-PFDGSGGELAHAFFPQYGGDAHFDDGETWTVRTPGGTDLFI 155
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH+LGL H S+M+ F + T
Sbjct: 156 VAAHEFGHSLGLGHSDVRG-------------------SLMAPF-------YQGYTPAFT 189
Query: 183 PMVSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 190 LPPDDVEGIQNLYGT 204
>gi|26354522|dbj|BAC40889.1| unnamed protein product [Mus musculus]
Length = 462
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 100 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 152
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 153 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 211
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 212 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 246
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 247 DIRNIQSLYGAP 258
>gi|288939975|ref|YP_003442215.1| hypothetical protein Alvin_0216 [Allochromatium vinosum DSM 180]
gi|288895347|gb|ADC61183.1| hypothetical protein Alvin_0216 [Allochromatium vinosum DSM 180]
Length = 132
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL Y D+ G D A HY+ HG++E R+P F Y+ + D+ N+
Sbjct: 56 FDEAWYLSQYPDVAAA-GYD---AIEHYVCHGIQENRHPAPWFDTAFYLERNPDVANSIM 111
Query: 458 DAPDLVQVGKDHFSNFGCEEGR 479
+ H+ FG E R
Sbjct: 112 NP-------LVHYHQFGKAERR 126
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 13/89 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F Y++ + D+ A D +H+ G +E R FD+ YL
Sbjct: 51 RESGLFDEAWYLSQYPDVAAAGYD-------AIEHYVCHGIQENRHPAPWFDTAFYLERN 103
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNP 521
D+ + HY G E R
Sbjct: 104 PDVA----NSIMNPLVHYHQFGKAERRPT 128
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 13/89 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F Y++ + D+ A D +H+ G +E R F+ YL
Sbjct: 51 RESGLFDEAWYLSQYPDVAAAGYD-------AIEHYVCHGIQENRHPAPWFDTAFYLERN 103
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
D+ N + HY G E R
Sbjct: 104 PDVANSIMN----PLVHYHQFGKAERRPT 128
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL Y D+ G D A HY+ HG++E R+P F Y+ + D+ N+
Sbjct: 56 FDEAWYLSQYPDVAAA-GYD---AIEHYVCHGIQENRHPAPWFDTAFYLERNPDVANSIM 111
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITF 567
+ H+ FG E R
Sbjct: 112 NP-------LVHYHQFGKAERRPTRR 130
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 10/74 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y + Y D+ +++++H+ G+ E R FD+ YL D+ N
Sbjct: 61 YLSQYPDVAAA----GYDAIEHYVCHGIQENRHPAPWFDTAFYLERNPDVANSI----MN 112
Query: 422 AARHYITHGVKEGR 435
HY G E R
Sbjct: 113 PLVHYHQFGKAERR 126
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
F+ YL+ Y D+ A +HY+ HG++E R F + L E++ D A
Sbjct: 56 FDEAWYLSQYPDVAAA----GYDAIEHYVCHGIQENRH---PAPWFDTAFYL-ERNPDVA 107
Query: 627 DL 628
+
Sbjct: 108 NS 109
>gi|126327140|ref|XP_001366784.1| PREDICTED: similar to matrix metalloproteinase 1 (interstitial
collagenase) [Monodelphis domestica]
Length = 469
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 70/218 (32%), Gaps = 52/218 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y + T D+ + R A WS V LTF + S +DIK
Sbjct: 107 WDKNNLTYSIENYTPDLAREDV-------DDAFRKAFKVWSDVSPLTFTKISKGEADIKI 159
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + + +FD+ + W L H A HE
Sbjct: 160 SFNYRDHYDNSPFDGPNGILAHAFQPGPGIGGDAHFDEEERWTKDHKNYN-LYHVAAHEF 218
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YP YG + + D+ S D
Sbjct: 219 GHSLGLAHSSDIGALMYPTYGFN---DLDNIQLS-----------------------QDD 252
Query: 188 IVAVQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTI 222
I +Q IYG G+ K ++ I T+
Sbjct: 253 IDGIQAIYGPSNNPVQPTGSTTPKACDKKLTFDAITTV 290
>gi|295688698|ref|YP_003592391.1| hemolysin-type calcium-binding region [Caulobacter segnis ATCC
21756]
gi|295430601|gb|ADG09773.1| Hemolysin-type calcium-binding region [Caulobacter segnis ATCC
21756]
Length = 1481
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 13/188 (6%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+++ + E TI G+D+L I +DL + G
Sbjct: 451 NGRGGDDVLRGEAGDDILIGGAGADTIDGGDGNDILAFDDI-YTSIQVDLGKAGPQNTRG 509
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I+ IE V G+ D+++G+ N F G+D+ DG G+DT Y S
Sbjct: 510 DGVDTLIS----IEGVKGTGYRDILVGSDGANTFEGRGGDDIIDGKGGIDTAVYDGNSTD 565
Query: 316 YKIYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y N + AN D L +VE L+F D+ + + ++ + D++
Sbjct: 566 YTWTHNANGSWTVRDSRANWTGTDTLLNVEILKFKDKSVTLSSDTTATVGDVYR--PDVV 623
Query: 373 QVIGQDVF 380
Q +
Sbjct: 624 QRLATSSS 631
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 15/151 (9%)
Query: 203 GNNI-YKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++I Y + T + G D +D + IDL S
Sbjct: 981 GDDILYGDGGDDRLIGGEGNDTFHGGDGVDTVDYS-TAAAAVTIDLTRSSSQQDTRGAGL 1039
Query: 260 MTIAQHTVIESVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGSSGLDTFFYY 310
TI IE+++GS +D + G + ++ + G+D+ G +G D
Sbjct: 1040 DTIWYD--IENLIGSRFDDTLRGGYTANTLNGGAGDDTIYGGGGSDILQGGAGNDVLNGE 1097
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
A Y + + A+ L+ +
Sbjct: 1098 ADDDSYDGGDGFDTVTYESASSGVTVDLTKI 1128
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 27/163 (16%)
Query: 204 NNIYKIEVQQKDSPFIQTIY-DSG-GDDLLDLTLIGGVKNYIDLNTESWS---------- 251
+++Y + Y D G G D D + G I++ +S
Sbjct: 360 DSLYGDAGDDTLIGGLGDDYLDGGYGIDTADYSGATGA---INVGLGYYSQDAGVMGRDS 416
Query: 252 -----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+I G IA + + G +G+D + G ++V +G+D+ G +G DT
Sbjct: 417 LISIENIKGSAFADWIAGTDGVNVITGGAGDDTINGRGGDDVLRGEAGDDILIGGAGADT 476
Query: 307 FFYYAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVE 342
+ + +I V + D L +E
Sbjct: 477 IDGGDGNDILAFDDIYTSIQVDLGKAGPQNTRGDGVDTLISIE 519
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 6/154 (3%)
Query: 237 GGVKNYIDLNTESWSS------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
G IDL S + G + TI + + + G G+D++ G+ ++
Sbjct: 936 GSTVVSIDLQANWVSGSDKADVVTGDDSANTIFGFSGNDVIDGGKGDDILYGDGGDDRLI 995
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND F G G+DT Y + I ++ D+E L +
Sbjct: 996 GGEGNDTFHGGDGVDTVDYSTAAAAVTIDLTRSSSQQDTRGAGLDTIWYDIENLIGSRFD 1055
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L A + + G D+ +
Sbjct: 1056 DTLRGGYTANTLNGGAGDDTIYGGGGSDILQGGA 1089
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 25/192 (13%)
Query: 195 YGAPKGSLGNNIY--KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
YG + Y S ++ +D G D D+ N I
Sbjct: 295 YGDRLTLSADGNYLVVFSGSTVTSVNVKLAWDP-GTDKADVLTGDAGANII--------- 344
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G+ N I G +GND + G++ ++ G+D DG G+DT Y
Sbjct: 345 -YGFGGNDVID---------GGAGNDSLYGDAGDDTLIGGLGDDYLDGGYGIDTADYSGA 394
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + DA +D L +E ++ + +++ A + +
Sbjct: 395 TGAINV---GLGYYSQDAGVMGRDSLISIENIKGSAFADWIAGTDGVNVITGGAGDDTIN 451
Query: 373 QVIGQDVFESMK 384
G DV
Sbjct: 452 GRGGDDVLRGEA 463
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 22/139 (15%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
IES+ GS+ D + G+ N +G +D DG +G DT Y
Sbjct: 1144 IESLKGSAFADTLTGDDGANTLNGGAGADSLSGGGGDDLLIGGAGDDTLDGGAGADTVRY 1203
Query: 310 YAPSYLYKIYRFENAIIVYD----ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
Y + Y + + + + D L +E++ F + + S +
Sbjct: 1204 YGWANDYSVVTNTDGSVTVTDLRGGSPDGVDRLIGLEKIIFRPEPTAGELNYELSSILRG 1263
Query: 366 ASYEDLIQVIGQDVFESMK 384
+SY+ I + +
Sbjct: 1264 SSYDPKITALAASISSDWA 1282
>gi|17230146|ref|NP_486694.1| hypothetical protein all2654 [Nostoc sp. PCC 7120]
gi|17131747|dbj|BAB74353.1| all2654 [Nostoc sp. PCC 7120]
Length = 1417
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 13/179 (7%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYD-SGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
Y +GN+ Y V S ++ + G+ + +L E ++
Sbjct: 1163 YYVGISQIGNDYYDPNVVGSGSGWLFADFGIENGEYTVSF----------NLTPEQPTNP 1212
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + T+ ES+ G+ GND++ ++ F +G+D+ DG G D F A +
Sbjct: 1213 VGTSGDDTLIGTDEEESLFGNGGNDILYARGGDDKLFGGAGDDLLDGGEGNDALFGGAGT 1272
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ N + ++ D D L + + D++ + Y+ S +DLI
Sbjct: 1273 DTL-LGGAGNDYLTGGTGDNLLDG-GDGNDLLYGNGGQDTLLGGAGDDIIYSGSGDDLI 1329
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 198 PKGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
P G+ G++ E + +Y GGDD L GG + DL +
Sbjct: 1212 PVGTSGDDTLIGTDEEESLFGNGGNDILYARGGDDKL----FGGAGD--DL-------LD 1258
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N + ++++G +GND + G + +N+ GND+ G+ G DT A
Sbjct: 1259 GGEGNDALFGGAGTDTLLGGAGNDYLTGGTGDNLLDGGDGNDLLYGNGGQDTLLGGAGDD 1318
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ IY ++ + FL+ +
Sbjct: 1319 I--IYSGSGDDLINGGLGNDIIFLNGGQD 1345
>gi|313114034|ref|ZP_07799588.1| hypothetical protein HMPREF9436_01443 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623654|gb|EFQ07055.1| hypothetical protein HMPREF9436_01443 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 337
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 49/143 (34%), Gaps = 10/143 (6%)
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC------IDSVNVK 357
D +Y + + + + + Q L +D + S
Sbjct: 197 WDCLWYNSTIDDIAVTKADIIYMDGSKETVNQKALYSGHFR--SDPTNQPYYVLTSKYAP 254
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVF 415
Y DL + G + ++ ++HF G+ EGR TF+ Y + DL F
Sbjct: 255 VYDYQYYKEHNADLAALFGDNQWKYLEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVAAF 314
Query: 416 GSDRGAAARHYITHGVKEGRNPD 438
G D HYI+ G EGR
Sbjct: 315 GDDNAKYYEHYISSGKAEGRKAS 337
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINA 455
+D Y DL +FG ++ H++ G+KEGR F Y A++ DL+ A
Sbjct: 254 PVYDYQYYKEHNADLAALFGDNQWKYLEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVAA 313
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT 482
F D +H+ + G EGR +
Sbjct: 314 FGDDN---AKYYEHYISSGKAEGRKAS 337
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
+ Y + DL F D +HF N G +EGR S TFN Y + DL
Sbjct: 256 YDYQYYKEHNADLAALFGDN---QWKYLEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVA 312
Query: 582 VFGSDRSAAAQHYITHGMKEGRALG 606
FG D + +HYI+ G EGR
Sbjct: 313 AFGDDNAKYYEHYISSGKAEGRKAS 337
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRN 497
+ Y + DL F D +HF N G +EGR TF+ Y + DL
Sbjct: 256 YDYQYYKEHNADLAALFGDNQWKY---LEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVA 312
Query: 498 VFGSDRGAAARHYITHGVKEGR 519
FG D HYI+ G EGR
Sbjct: 313 AFGDDNAKYYEHYISSGKAEGR 334
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLIN 538
+D Y DL +FG ++ H++ G+KEGR F Y A++ DL+
Sbjct: 253 APVYDYQYYKEHNADLAALFGDNQWKYLEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVA 312
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT 566
AF D +H+ + G EGR +
Sbjct: 313 AFGDDN---AKYYEHYISSGKAEGRKAS 337
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
+ ++ Y DL +FG ++ +H++ GMKEGR Q S NL+
Sbjct: 253 APVYDYQYYKEHNADLAALFGDNQWKYLEHFVNSGMKEGR-------QGSSTFNLAAYKA 305
Query: 624 DKADLSLSFDHKKVDLYTDYFGDG 647
+ DL +F Y Y G
Sbjct: 306 NNPDLVAAFGDDNAKYYEHYISSG 329
>gi|304391429|ref|ZP_07373371.1| putative Ig domain protein [Ahrensia sp. R2A130]
gi|303295658|gb|EFL90016.1| putative Ig domain protein [Ahrensia sp. R2A130]
Length = 4370
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 64/216 (29%), Gaps = 28/216 (12%)
Query: 195 YGAPKGSLG-NNIYKIEV-----------QQKDSPFIQTIYDSGGDDLLDLTLIG----- 237
YG G IY S ++ SGGDD +D T
Sbjct: 3597 YGGTDSVTGVRTIYDTSSGDFFRIDGSLENSHSSNRVEVELSSGGDDTVDFTGASRGRVA 3656
Query: 238 ----GVKNYIDLNTESWSSIGGYEKN----MTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++L T S I N +I T I+ GS DV+ GN +N F
Sbjct: 3657 FTNASEGVSVNLATGIASDINASNGNQIGSNSITGATEIK---GSDFGDVLTGNGGDNQF 3713
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G+D G +G+D+ +++ + V D +S +E +
Sbjct: 3714 QGRGGDDTITGGAGIDSISHWSARDFVTVDLSAATEQVSQDGFGGTDTVSGIENVNGGLS 3773
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+L A + L +
Sbjct: 3774 HDMITGQTNSQVLNGYAGNDVLRSGGLGGAVTLIGD 3809
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 8/202 (3%)
Query: 199 KGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
L ++I ++ I G D + +G +DL SS+G +
Sbjct: 3270 TTDLDDSIIGSAADEQFIARQGNDVIDGGSGFDTIRYDRLGAASVELDLAAN--SSVGIW 3327
Query: 257 EKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
T IE V GS+ G D ++G++A+N G D+ DG SG DT + +
Sbjct: 3328 GDGQFNQTLTNIEGVRGSNIGVDTILGSTADNRLEGRGGTDIIDGRSGNDTLIGGSGGDV 3387
Query: 316 YKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-YTASYEDLI 372
+ I ++ +D + D + ++++ A L+
Sbjct: 3388 FIITSGSGVDVIEDFDPTTSGDRLVFDYSGINALGDFESVTLNGSDTLIDIDGAGNTLLL 3447
Query: 373 QVIGQDVFESMKHFYEFGLSEG 394
Q + F F G
Sbjct: 3448 QNYDLNGAPFPADFLVFSAEFG 3469
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 7/181 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+N Y + + Q G ++ + +L + + G ++
Sbjct: 4047 GDNTYMEITALEGNNSFQID---SGVVRVNYSFNFVSPIVANLIAGTITHSAGNSDTVSG 4103
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A I +VG+ D IG + + F G+D +G +G+D Y ++
Sbjct: 4104 ALG--ITEIVGTRDTDTFIGTANDETFIGLGGDDNINGGAGIDRVRYDLVGDTSELDVDL 4161
Query: 323 NAIIVYDANEHK--QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A A + L+ +E + + L+ + + G DV
Sbjct: 4162 TAGTADGAFDEDGFSHTLTGIEWVTGSFNDDIIAGSSNNERLDGGGGADTISGQGGNDVI 4221
Query: 381 E 381
Sbjct: 4222 T 4222
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 71/214 (33%), Gaps = 31/214 (14%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIG--------------G 238
+YG+ + + + I+ G G+D+ ++
Sbjct: 3179 LYGSAQT----DTFNIDNGPITDETQFMQVGGGRGNDVYNIISGNIRLDLRRDENFEQPE 3234
Query: 239 VKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
I+L+ S I G+ TI S+ + +D +IG++A+ F GNDV
Sbjct: 3235 TGVQINLSLGSNQIINDGFGGTDTITGPGSFTSIRTTDLDDSIIGSAADEQFIARQGNDV 3294
Query: 298 FDGSSGLDTFFYY-----------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
DG SG DT Y A + I+ E + V+ +
Sbjct: 3295 IDGGSGFDTIRYDRLGAASVELDLAANSSVGIWGDGQFNQTLTNIEGVRGSNIGVDTILG 3354
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ I++ + + LI G DVF
Sbjct: 3355 STADNRLEGRGGTDIIDGRSGNDTLIGGSGGDVF 3388
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 41/139 (29%), Gaps = 8/139 (5%)
Query: 205 NIYKIEVQQKDSPFI-----QTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEK 258
+ D FI I G D + L+G +DL + +
Sbjct: 4115 DTDTFIGTANDETFIGLGGDDNINGGAGIDRVRYDLVGDTSELDVDLTAGTADGAFDEDG 4174
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
IE V GS +D++ G+S N G D G G D ++
Sbjct: 4175 FSHTLTG--IEWVTGSFNDDIIAGSSNNERLDGGGGADTISGQGGNDVITVADVAFTSVD 4232
Query: 319 YRFENAIIVYDANEHKQDF 337
I+ DA D
Sbjct: 4233 GGTGQDILQLDAGGVFLDL 4251
Score = 44.3 bits (103), Expect = 0.071, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 6/125 (4%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIG--GVKNYIDLNTES---WSSIG 254
+ G+ + IE + + ++D G + L D + G ID++
Sbjct: 3391 TSGSGVDVIEDFDPTTSGDRLVFDYSGINALGDFESVTLNGSDTLIDIDGAGNTLLLQNY 3450
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
A V + G +G++ + G + ++ + G+D G G D
Sbjct: 3451 DLNGAPFPADFLVFSAEFGGTGDETLTGTAVSDALLGNGGDDTLLGLDGDDILISGRGVQ 3510
Query: 315 LYKIY 319
+
Sbjct: 3511 DFSTT 3515
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 13/137 (9%)
Query: 231 LDLTLIGGVKNYIDLNTESWS--SIGGYEKNMTIAQHTVIES----VVGSSGNDVVIGNS 284
+ +T+ G + I+ S + + + I + + G +GND++IG+
Sbjct: 3022 ITITVDGVTDSTINFVEGSSARDTFTPTTGDDFFVSGGNISNDEEFLFGGNGNDILIGSD 3081
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A + + FDG G DT + + + + + +
Sbjct: 3082 A-------AVGERFDGGDGNDTIITGSNNASTSDFSAGSRGSDRYYFTGNGNGYQGISYA 3134
Query: 345 RFADQCIDSVNVKQRSI 361
+ +++ +
Sbjct: 3135 ALTGGLVATISAATNTA 3151
>gi|209520246|ref|ZP_03269015.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. H160]
gi|209499321|gb|EDZ99407.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. H160]
Length = 398
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 27/103 (26%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----------------PDAF 440
+ FD YL + D+ + G A +HYI +G EGR PD F
Sbjct: 307 VNFDGDAYLDANPDV----AASGGNALQHYIYYGRFEGRPLSSAESFQRKARLAQLPDGF 362
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
A Y+ ++ D+ A D DHF FG EGR +
Sbjct: 363 DAKLYLEANPDVAAAGVD-------AVDHFVEFGRAEGRPLRP 398
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 27/103 (26%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----------------PDA 523
V FD YL + D+ G+ A +HYI +G EGR PD
Sbjct: 306 IVNFDGDAYLDANPDVAASGGN----ALQHYIYYGRFEGRPLSSAESFQRKARLAQLPDG 361
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
F A Y+ ++ D+ A D DHF FG EGR +
Sbjct: 362 FDAKLYLEANPDVAAAGVD-------AVDHFVEFGRAEGRPLR 397
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 41/187 (21%)
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+++ D+ H+ F ++G + + + L L +R+ R A
Sbjct: 224 YSAYHDIYEPAIQKVIAENSAGPHY--FYPKKGDVLLWHANL-LHGGSKMRDPRHVSRKA 280
Query: 506 AARHYI---------THGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
H+ G+ P F Y+ ++ D+ + + H+
Sbjct: 281 LVCHFFADGCLCYHDLTGMPSSLTPIVNFDGDAYLDANPDVAASGGN-------ALQHYI 333
Query: 556 NFGYEEGRSIT-----------------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+G EGR ++ F+ LYL + D+ A H++ G
Sbjct: 334 YYGRFEGRPLSSAESFQRKARLAQLPDGFDAKLYLEANPDVAAA----GVDAVDHFVEFG 389
Query: 599 MKEGRAL 605
EGR L
Sbjct: 390 RAEGRPL 396
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 28/97 (28%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-----------------T 482
F Y+ ++ D+ + + H+ +G EGR +
Sbjct: 309 FDGDAYLDANPDVAASGGN-------ALQHYIYYGRFEGRPLSSAESFQRKARLAQLPDG 361
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
FD+ LYL + D+ G D A H++ G EGR
Sbjct: 362 FDAKLYLEANPDVAAA-GVD---AVDHFVEFGRAEGR 394
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 25/114 (21%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT---- 398
+ Y + D+ G +++H+ +G EGR ++
Sbjct: 293 YHDLTGMPSSLTPIVNFDGDAYLDANPDVAASGG----NALQHYIYYGRFEGRPLSSAES 348
Query: 399 -------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
FD+ LYL + D+ G D A H++ G EGR
Sbjct: 349 FQRKARLAQLPDGFDAKLYLEANPDVAAA-GVD---AVDHFVEFGRAEGRPLRP 398
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
+ F+ D YL + D+ G+ A QHYI +G EGR L
Sbjct: 307 VNFDGDAYLDANPDVAASGGN----ALQHYIYYGRFEGRPLS 344
>gi|255958232|ref|NP_001157646.1| matrix metalloproteinase 1 isoform 1 [Tribolium castaneum]
gi|270008219|gb|EFA04667.1| matrix metalloproteinase 1 [Tribolium castaneum]
Length = 581
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 69/200 (34%), Gaps = 44/200 (22%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L+ W + YK + + ++ +E+ R A WS+ DLTF
Sbjct: 98 NRAKRYALQGSRWKVKNLNYKISKYPKNLNTKEV------DKEIHR-AFSVWSQYTDLTF 150
Query: 71 E--ETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+ S H +I+F S +G Y + + +FD ++ W +GT
Sbjct: 151 TPSKGSAHIEIRFESGEHGDGDPFDGPGGTLAHAYFPVFGGDAHFDASEKWTINSYRGTN 210
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
L A HE GH+LGL H +M+ F +
Sbjct: 211 LFQVAAHEFGHSLGLSHSDVREA-------------------LMAPFYR-------GYDP 244
Query: 180 CATPMVSDIVAVQKIYGAPK 199
DI +Q +YG
Sbjct: 245 LFELHEDDIQGIQALYGKKT 264
>gi|83313155|ref|YP_423419.1| RTX toxins and related Ca2+-binding protein [Magnetospirillum
magneticum AMB-1]
gi|82947996|dbj|BAE52860.1| RTX toxins and related Ca2+-binding protein [Magnetospirillum
magneticum AMB-1]
Length = 1352
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 227 GDDLLDLTLIGGVKNY--IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G +++++T Y +D +E ++ ++T+ T + + G S + + G
Sbjct: 665 GIEVINITNASVAGQYFKVDNQSEGFTINVTSSAHVTVLGGTGNDVINGGSAGEYLWGYQ 724
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVER 343
N+ ++GND G +G D + + Y + + V D + D L+ +E
Sbjct: 725 GNDTITGNAGNDTIVGDAGADVAVFTGNAADYLLTTSSGTLTVTDRSGTDGTDTLTGIET 784
Query: 344 LRFADQCIDSVNVKQR 359
L FAD
Sbjct: 785 LTFADGSFAVSASGTT 800
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 70/194 (36%), Gaps = 18/194 (9%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G I + + + T+ D+ D +T ++++ +++ +I G + +
Sbjct: 525 TGTGTSSITFDEVSAAGVNTVVDAVSGDGDSVTFYQTTAGTLNISAKTFVNIEGIILDGS 584
Query: 262 IAQHTVI-------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
A V+ +++G SGND + G + + F SGNDV + G +
Sbjct: 585 TASGDVVLVGGAQGATIIGGSGNDTLSGGAGADSFIGGSGNDVIYANQGDPLINGGIGTD 644
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV------KQRSILEYTASY 368
I +D N L +E + + + + +I ++++
Sbjct: 645 TLVITA-----TTFDDNNFDDTHLQGIEVINITNASVAGQYFKVDNQSEGFTINVTSSAH 699
Query: 369 EDLIQVIGQDVFES 382
++ G DV
Sbjct: 700 VTVLGGTGNDVING 713
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G SGND + G + N+ G++ D +G DT Y + ++ +V
Sbjct: 919 TLTGGSGNDTIHGAAGNDTLVGGGGSNTIDAGAGTDTVSYGSMGSGITATLNGSSAVVTH 978
Query: 330 ANEHKQDFLSDVERLRFADQ 349
+ D +++ E LR +
Sbjct: 979 SAS--TDTVTNTEILRGSGH 996
Score = 41.6 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 18/180 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ TI+ + G+D L + GG N ID + + G + A
Sbjct: 917 DLTLTGGSGNDTIHGAAGNDTL---VGGGGSNTIDAGAGTDTVSYGSMGSGITATLNGSS 973
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF-----------DGSSGLDTFFYYAPSYLYKI 318
+VV S + + N+ + S +DVF DG +G+DT Y A
Sbjct: 974 AVVTHSASTDTVTNT--EILRGSGHDDVFFVASASVGVTVDGGAGVDTMDYSAMGAGITA 1031
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ V A D +++VE + + + L G D
Sbjct: 1032 TVTGTSASVVHA--GGTDAITNVEAWVGSAHDDTFIGDSGGDTFFGGIGADHLTGGGGAD 1089
>gi|322791350|gb|EFZ15837.1| hypothetical protein SINV_05285 [Solenopsis invicta]
Length = 500
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 56/160 (35%), Gaps = 32/160 (20%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA--QEVARWALGEWSKVVDLTFEET 73
+ L+ W + YK T LN +E+A A WS DLTF
Sbjct: 60 YALQGSRWRTKNLTYKISKYP--------TGLNKQEVDKEIAN-AFNVWSGETDLTFTRK 110
Query: 74 SIHSDIKFI-------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+ H ++ G Y Y + +FD ++ W +GT L
Sbjct: 111 TGHENVHIEVRFEVGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDSERWTIRSYRGTNL 170
Query: 121 SHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
A HE GH+LGL H Y G P + +D D
Sbjct: 171 FQVAAHEFGHSLGLSHSDVKEALMAPFYRGYDPHFTLDQD 210
>gi|229368716|gb|ACQ62999.1| matrix metalloproteinase 24 preproprotein (predicted), 5 prime
[Dasypus novemcinctus]
Length = 245
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 64/204 (31%), Gaps = 55/204 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 74 YALTGQKWRQKHITYSIHNYTPKVGELDT-------RKAIRQAFDVWQKVTPLTFEEVPY 126
Query: 76 H--------SDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGI 114
H +DI G++ + + +FD + W G
Sbjct: 127 HEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 186
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + +M+ F
Sbjct: 187 ANHDGNDLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQYMET 227
Query: 173 MDASFGYCATPMVSDIVAVQKIYG 196
+ P D+ +QKIYG
Sbjct: 228 HNFKL-----PQ-DDLQGIQKIYG 245
>gi|157820645|ref|NP_001100629.1| matrix metalloproteinase-19 [Rattus norvegicus]
gi|149029634|gb|EDL84805.1| matrix metalloproteinase 19 (predicted) [Rattus norvegicus]
gi|225422918|gb|ACN90949.1| matrix metalloproteinase 19 [Rattus norvegicus]
Length = 517
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 61/189 (32%), Gaps = 47/189 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIH-SD 78
+W + ++ + + L+P+ + A WS V LTF E +D
Sbjct: 103 GHWRKKHLTFRILNVP--------STLSPSRVRAALHQAFKYWSNVAPLTFREVKAGWAD 154
Query: 79 IKFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHE 127
I+ C+ +D ++FD + W G +G L A HE
Sbjct: 155 IRLSFHGRQSPYCSNSFDGPGKVLAHADVPELGSVHFDNDEFWTEGTYQGVNLRIIAAHE 214
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GHALGL H Y + + A + D
Sbjct: 215 VGHALGLGHSR--------------------------YTQALMAPVYAGYQPYFRLHPDD 248
Query: 188 IVAVQKIYG 196
+ +Q +YG
Sbjct: 249 VAGIQALYG 257
>gi|1514965|dbj|BAA11525.1| stromelysin-1/2-b [Cynops pyrrhogaster]
Length = 469
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 57/191 (29%), Gaps = 49/191 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--------- 72
W + + Y+ T D+ + A WS V LTF +
Sbjct: 106 AWRTHALTYRILNYTPDMARADV-------DTAIQKAFKVWSDVTPLTFTQIYYGTADIQ 158
Query: 73 ----TSIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHE 127
H D G + + +FD+ + W + GT L A HE
Sbjct: 159 ISFGAREHGDFNPFDGPYGTLAHAFAPGTGIGGDAHFDEDEKWS-KVSTGTNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GH+LGL H N +P Y SY P +
Sbjct: 218 FGHSLGLSHSNDRNALMFPTY----------------SYTDPARFRLP----------KD 251
Query: 187 DIVAVQKIYGA 197
DI +Q IYG
Sbjct: 252 DINGIQAIYGP 262
>gi|328780642|ref|XP_393358.4| PREDICTED: matrix metalloproteinase-14-like [Apis mellifera]
Length = 575
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/289 (21%), Positives = 90/289 (31%), Gaps = 85/289 (29%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGEWSKVVDLTFEET- 73
+ L+ W + YK + + ELN A WS+ DL F +
Sbjct: 117 YALQGSRWRVKKLSYKISKYPRNLPQHKVDAELNK--------AFKVWSEYTDLVFVQKK 168
Query: 74 --SIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+H +I+F +G Y Y + +FD A+ W +GT L
Sbjct: 169 SGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEQWTIDSFRGTNLFQ 228
Query: 123 NALHEIGHALGLMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
A HE GH+LGL H Y G P + +D D
Sbjct: 229 VAAHEFGHSLGLSHSDVKSALMAPFYRGYEPYFRLDED---------------------- 266
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF-----------IQTIY 223
DI +Q +YG + G + SP + T++
Sbjct: 267 ------------DIQGIQALYGTKTSNNGGVPSGPKPTTTASPSEEDSELCTNSKVDTMF 314
Query: 224 DS--------GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+S GD LT G Y L + SW G N+ A
Sbjct: 315 NSAEGHMYVFKGDRYWRLTSDGVAVGYPKLISHSW---KGLPGNIDAAF 360
>gi|192289969|ref|YP_001990574.1| outer membrane adhesin like proteiin [Rhodopseudomonas palustris
TIE-1]
gi|192283718|gb|ACF00099.1| outer membrane adhesin like proteiin [Rhodopseudomonas palustris
TIE-1]
Length = 1712
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 63/188 (33%), Gaps = 10/188 (5%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G++GN+ + + TI G D LDL+ GV S+++
Sbjct: 1442 GNVGNDTLIGGGGDDVLRGGAGDDTIDGGAGFDTLDLSDATGVVTI------SFTAGTAT 1495
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ T IES V G D V G + +V GNDV G +G D F A
Sbjct: 1496 GAGIGTDHFTGIESFVLGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLFGGAGDDSL 1555
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ ++ S V+ + D D + IL A + + G
Sbjct: 1556 D-GGSGDDVVDGGIGNDTLKGGSGVDIISGGDGNDDIDGGSENDILNGGAGNDIIKGGSG 1614
Query: 377 QDVFESMK 384
D+
Sbjct: 1615 ADIITGGA 1622
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 44/144 (30%), Gaps = 17/144 (11%)
Query: 254 GGYEKNMTIAQHTV--IESVVGSSGNDVVI---------GNSANNVFFESSGNDVFDGSS 302
G I ++ IE+V+G SGND +I GN N+ G+DV G +
Sbjct: 1403 SGQAAGDEIGYDSLRNIETVLGGSGNDTLIGDGNANTLVGNVGNDTLIGGGGDDVLRGGA 1462
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVY------DANEHKQDFLSDVERLRFADQCIDSVNV 356
G DT A + + + D + +E +
Sbjct: 1463 GDDTIDGGAGFDTLDLSDATGVVTISFTAGTATGAGIGTDHFTGIESFVLGEGADRVTGG 1522
Query: 357 KQRSILEYTASYEDLIQVIGQDVF 380
++ + + G D
Sbjct: 1523 NGADVINGGGGNDVIAGGAGNDKL 1546
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 69/194 (35%), Gaps = 11/194 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLDL-TLIGGVKNYID---LN 246
GA + + GN I + ++ GDD LD + V I L
Sbjct: 1515 GADRVTGGNGADVINGGGGNDVIAGGAGNDKLFGGAGDDSLDGGSGDDVVDGGIGNDTLK 1574
Query: 247 TESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S I G + N I + + + G +GND++ G S ++ +GND+ G SG D
Sbjct: 1575 GGSGVDIISGGDGNDDIDGGSENDILNGGAGNDIIKGGSGADIITGGAGNDILTGGSGAD 1634
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEY 364
F + A + F D + ++ + + Q + V V +
Sbjct: 1635 VFVFAAGFGKDIVTDFATKGSSADVLQFSSSMFANFTDVMSHTTQVGNDVVVTLDADNSL 1694
Query: 365 TASYEDLIQVIGQD 378
T + + + D
Sbjct: 1695 TLANTQIGSLAADD 1708
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N I + + G+ G+D +IG S ++ G DV G G D
Sbjct: 269 VRAGAGNDVIYGDAGNDLLFGAGGSDQLIGGSGDDFLDGGEGTDVLTGGVGNDVIVATGD 328
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++ + + + A+ + D ++
Sbjct: 329 ELIFHAGDGIDLVSLDSASTIRLDGVTSANV 359
>gi|288959972|ref|YP_003450312.1| calcium binding hemolysin protein [Azospirillum sp. B510]
gi|288912280|dbj|BAI73768.1| calcium binding hemolysin protein [Azospirillum sp. B510]
Length = 6551
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 62/180 (34%), Gaps = 12/180 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G D + L ++L + + S ++
Sbjct: 1451 GGNDTLVGLGGADTLVGGDGIDTAEY-LASTAAVTVNLASGTGSGGDAQGDRLS-----G 1504
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE++ GS+ D +IG++ N+ + GND G +G DT A S +A+ V
Sbjct: 1505 IENLTGSAFGDRLIGDAGANILDGAGGNDTLVGGAGADTLIGGAGSDTADYSASASAVTV 1564
Query: 328 ------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D L VE L + + V Q + L A + LI G D +
Sbjct: 1565 DLAAGTGLGGTAAGDVLIGVENLIGSSRADRLVGDGQDNSLRGGAGADTLIGGDGSDTAD 1624
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 54/184 (29%), Gaps = 12/184 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + T+ G D D T + L + + G ++ +
Sbjct: 1600 GQDNSLRGGAGADTLIGGDGSDTADYTG-SAAGVTVSLADGT-ADGGDATGDVL----SG 1653
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE++ GS D + G+ N GND G +G D+ A A+ V
Sbjct: 1654 IENLTGSGAADRLTGDGGANRLRGGGGNDTLIGGAGADSLSGGAGLDTADYSASAGAVSV 1713
Query: 328 YDANEHKQ------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A + D L VE L + L+ + L G D
Sbjct: 1714 NLATGIGRGGDAEGDRLDGVENLIGTGLADSLTGDGAANYLDGRGGADSLAGGAGDDTLR 1773
Query: 382 SMKH 385
+
Sbjct: 1774 VLDD 1777
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSS--IGGYEK 258
Y + + IY GGDD L D G + ID E+ S G
Sbjct: 5337 YNAGDVIRGNGGTDAIYGYGGDDTLYGGDGVDTLYGGDGDDLIDSRDETVSGDMAYGEAG 5396
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ TI + +++ G G+DV+ GN+ N+ ++GND G +G DT +
Sbjct: 5397 DDTIRGGSANDALYGGDGDDVIEGNAGNDSIEGNAGNDSLSGGAGADTLMGGDGNDTLGG 5456
Query: 319 YRFENAIIVYDANE 332
N I ++
Sbjct: 5457 GAGANWIDTGVGDD 5470
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 17/193 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ G D D + G + +DL+ + + G E ++ + IE
Sbjct: 1058 DDTLAGGQGADTLIGGDGIDTADYSASAGGVS-VDLSAGTAAG-GDAEGDVL----SGIE 1111
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ GS G+D ++G++ N+ GND G G DT + L + + V
Sbjct: 1112 NLTGSDGDDRLVGDAGANLLDGRGGNDTLIGLGGADTLIGGDGTDLADYSASADGVGVDL 1171
Query: 330 ANEHKQ------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES- 382
D LS VE + + + + L+ A + L + G D
Sbjct: 1172 TAGSGAGGDAEGDALSGVEDVTGSAFADRLTGAQTANRLDGGAGDDRLAGLGGADTLIGG 1231
Query: 383 ----MKHFYEFGL 391
+ + G
Sbjct: 1232 AGIDLADYSASGA 1244
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 54/177 (30%), Gaps = 9/177 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G D D + +D G ++ I
Sbjct: 1530 GGNDTLVGGAGADTLIGGAGSDTADYS-ASASAVTVD-LAAGTGLGGTAAGDVLIG---- 1583
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+++GSS D ++G+ +N +G D G G DT Y + + +
Sbjct: 1584 VENLIGSSRADRLVGDGQDNSLRGGAGADTLIGGDGSDTADYTGSAAGVTVSLADG---T 1640
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + D LS +E L + + L + LI G D
Sbjct: 1641 ADGGDATGDVLSGIENLTGSGAADRLTGDGGANRLRGGGGNDTLIGGAGADSLSGGA 1697
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSS 275
+I +GG+D L G L + + I G E + +++ T +S++G +
Sbjct: 5125 KANDSIDGAGGNDTL-----YGYAGDDLLTGGAGADILDGGEGSDSLSGGTGNDSLIGGA 5179
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
GND +IG + G D G +G D+ A + N+I
Sbjct: 5180 GNDTLIGGDGADTLSGGEGADSLSGGAGNDSLLGGAGNDTLAGGDGANSI 5229
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 12/170 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ T+ G D D + G +S GG + + +E++ GS
Sbjct: 984 GAGGADTLIGGEGIDTADYSTSGAGVAV------DLASGGGAGGDAEGDVLSGVENLTGS 1037
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ D + G++ N +G+D G G DT + V +
Sbjct: 1038 AHGDRLTGDAGANRLDGGAGDDTLAGGQGADTLIGGDGIDTADYSASAGGVSVDLSAGTA 1097
Query: 335 Q------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D LS +E L +D V ++L+ + LI + G D
Sbjct: 1098 AGGDAEGDVLSGIENLTGSDGDDRLVGDAGANLLDGRGGNDTLIGLGGAD 1147
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 58/180 (32%), Gaps = 21/180 (11%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
K + G D+ D + + IDL T G ++ IE+++
Sbjct: 816 KGGGGNNVLIGGDGIDIADYSAETEAIS-IDLRTGELRHGGWMADRLS-----GIETILA 869
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIYRFENAI 325
GND + G+ +N G+D G +G D + + Y A
Sbjct: 870 GGGNDALAGDGGDNRLSGGVGDDSLSGGAGDDVLDGGSGADRLDGGDGIDTATYAGSGAG 929
Query: 326 IVYD-------ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D + + D LS VE L + + L+ A + L G D
Sbjct: 930 VTVDLAVGTGTGGDAEGDVLSGVENLIGSAHGDRLTGDAGANHLDGGAGDDVLAGAGGAD 989
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 12/170 (7%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
T+ G DL D + G +DL + + ++ +E++ GS+
Sbjct: 1223 GGADTLIGGAGIDLADYS-ASGAGVTVDLAAGAGTGGDAEGDVLS-----GVENLTGSAF 1276
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ- 335
D + G+S +NV +G+D G G DT + +IV A
Sbjct: 1277 ADRLTGDSGSNVLEGGAGDDTLAGGQGADTLIGGDGADSADYAASAGGVIVDLAAGTGVG 1336
Query: 336 -----DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L+ +E + + + LE A + L G D
Sbjct: 1337 GDAEGDLLTGIENVTGSAHDDGLTGDGGANRLEGGAGDDWLSGGTGADSL 1386
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 54/177 (30%), Gaps = 12/177 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G DL D + +DL S + ++
Sbjct: 1135 GGNDTLIGLGGADTLIGGDGTDLADYS-ASADGVGVDLTAGSGAGGDAEGDALS-----G 1188
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E V GS+ D + G N +G+D G G DT A L + V
Sbjct: 1189 VEDVTGSAFADRLTGAQTANRLDGGAGDDRLAGLGGADTLIGGAGIDLADYSASGAGVTV 1248
Query: 328 ------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D LS VE L + ++LE A + L G D
Sbjct: 1249 DLAAGAGTGGDAEGDVLSGVENLTGSAFADRLTGDSGSNVLEGGAGDDTLAGGQGAD 1305
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 57/190 (30%), Gaps = 36/190 (18%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + TIY GDD LD G + +I +
Sbjct: 4185 YNVGDLIQGLGGKDTIYGYAGDDTLD----------------------GGAGSDSILGGS 4222
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+S++G +G+D + G N++ GND G +G DT + ++ I
Sbjct: 4223 GDDSLIGGAGDDQLEGEDGNDLLLGGDGNDSIIGGAGNDTLLGGQGADQLYGGAGDDLID 4282
Query: 327 VYDA-----------NEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D E D + E D LE A + L+
Sbjct: 4283 NRDDTGAGASRNVAYGEAGDDTILGGDAGETFSGGDGNDRVEGNGGNDWLEGNAGNDSLL 4342
Query: 373 QVIGQDVFES 382
G D +
Sbjct: 4343 GGEGDDSLQG 4352
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 53/179 (29%), Gaps = 15/179 (8%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
D +GY + +Y G++ + +Y GDD
Sbjct: 3697 GGNDTIYGYTGDDSLDGGAGDDFLY----AGTGDD------SAEGGDGADALYGDVGDDT 3746
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L GG N S+ G + ++ + + G +G D + G + N++
Sbjct: 3747 LS----GGAGNDSLYGEAGADSLSGGDGADFLSGGDGNDGLAGGAGADTLEGGAGNDLLE 3802
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G+D+ G G DT + N I +D + L
Sbjct: 3803 GGDGDDILKGGDGDDTLVGGGGTDRL-FTGAGNDTIRFDGGRETITNEGGFDTLVIGGG 3860
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 13/120 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I TIY GG D+ GG N + I G +
Sbjct: 4937 GINDVSYGGSGNDTIYGGGGTDV----AYGGTGNDL---------IDGGGGTDYLYGEDG 4983
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+SV+G +G D + G + ++ GND DG +G D + A + I A ++
Sbjct: 4984 ADSVLGGAGADYLYGQAGDDTLDGGIGNDTIDGGAGDDLIRFTAGEGIDSITGGGGADVL 5043
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 12/141 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-------GVKNYIDLNTESWSS-IGGYEK 258
Y + + T+Y GDDL+D G + S + + G +
Sbjct: 5355 YGGDDTLYGGDGVDTLYGGDGDDLIDSRDETVSGDMAYGEAGDDTIRGGSANDALYGGDG 5414
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I + +S+ G++GND + G + + GND G +G + + +
Sbjct: 5415 DDVIEGNAGNDSIEGNAGNDSLSGGAGADTLMGGDGNDTLGGGAGAN--WIDTGVGDDLV 5472
Query: 319 YRFENAIIVYDANEHKQDFLS 339
A V D LS
Sbjct: 5473 LYQGGADTV--VGGGGNDTLS 5491
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 65/186 (34%), Gaps = 24/186 (12%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSS 275
+Y GDD+L D TL GG N L+ S + + G + + T + G S
Sbjct: 603 LYGGSGDDVLEGGSEDDTLDGGTGND-SLHGGSGADLLYGGMGDDLLDGGTDANRLYGGS 661
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--- 332
G+D ++G + SG+DV +G G D+ + +++I N+
Sbjct: 662 GDDTLLGGDVGDTLDGGSGDDVINGGIGADSIRGGSGDDRIDGGENDDSIDGGSGNDTIL 721
Query: 333 -----------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D +SD + + D+ L+ + LI G D
Sbjct: 722 GGGGRDVVMAGDGDDLVSDGDDVWSDDRF---DGGAGNDTLDGGLGSDTLIGGAGNDRLS 778
Query: 382 SMKHFY 387
+
Sbjct: 779 VGNDYN 784
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 12/136 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y GDDL+D G ++ G + TI E
Sbjct: 4260 NDTLLGGQGADQLYGGAGDDLIDNRDDTGAGASRNV-------AYGEAGDDTILGGDAGE 4312
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND V GN N+ ++GND G G D+ + + N+I+
Sbjct: 4313 TFSGGDGNDRVEGNGGNDWLEGNAGNDSLLGGEGDDSLQGGDGADTLEGGSGTNSILTGL 4372
Query: 330 AN-----EHKQDFLSD 340
+ +D +++
Sbjct: 4373 GDDVIRYSGGRDTITN 4388
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 56/181 (30%), Gaps = 10/181 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + D G G D LD Y + A+
Sbjct: 888 GVGDDSLSGGAGDDVLDGGSGADRLDGGDGIDTATYAGSGAGVTVDLAVGTGTGGDAEGD 947
Query: 267 V---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
V +E+++GS+ D + G++ N +G+DV G+ G DT
Sbjct: 948 VLSGVENLIGSAHGDRLTGDAGANHLDGGAGDDVLAGAGGADTLIGGEGIDTADYSTSGA 1007
Query: 324 AIIV------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ V + + D LS VE L + + L+ A + L G
Sbjct: 1008 GVAVDLASGGGAGGDAEGDVLSGVENLTGSAHGDRLTGDAGANRLDGGAGDDTLAGGQGA 1067
Query: 378 D 378
D
Sbjct: 1068 D 1068
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 52/156 (33%), Gaps = 19/156 (12%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-I 253
Y A G + T+Y GDDLL GG I L+ S +
Sbjct: 5124 YKANDSIDG------------AGGNDTLYGYAGDDLL----TGGAGADI-LDGGEGSDSL 5166
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N ++ ++++G G D + G + +GND G +G DT +
Sbjct: 5167 SGGTGNDSLIGGAGNDTLIGGDGADTLSGGEGADSLSGGAGNDSLLGGAGNDTLAGGDGA 5226
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ I+Y+ + L F D
Sbjct: 5227 NSIN-GGTGDDTILYEGGADTIGGGGGGDELVFGDG 5261
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY + T+ ++V G +G D+++GN ++ F +G+D G +G++T + A
Sbjct: 4491 IYGYAGDDTLDGGAGGDAVYGGAGADLLLGNDGDDTLFGDAGDDTLIGGAGINTLYGGAG 4550
Query: 313 SYLYKIYRFENAIIVYDANE 332
+ + ++ + N+
Sbjct: 4551 DNVIRFDGGQDIVYNSGGND 4570
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 43/151 (28%), Gaps = 29/151 (19%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL----------DLTLIGGVKNYIDLNTESWSSIG-GYEK 258
TI G+D + + N D N + + G
Sbjct: 4888 NDSLSGDSGNDTILGGAGNDTILGGTGSDEMHGGAGDDLIDNRDDPNAGGINDVSYGGSG 4947
Query: 259 NMTIAQHTVIESVVGSSGNDVV------------------IGNSANNVFFESSGNDVFDG 300
N TI + G +GND++ +G + + + +G+D DG
Sbjct: 4948 NDTIYGGGGTDVAYGGTGNDLIDGGGGTDYLYGEDGADSVLGGAGADYLYGQAGDDTLDG 5007
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G DT A L + E +
Sbjct: 5008 GIGNDTIDGGAGDDLIRFTAGEGIDSITGGG 5038
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 13/116 (11%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+++ S Y G+D L L ++ G N I
Sbjct: 5969 GDDLLDSRADVAGSGDYDVAYGEAGNDTL-------------LGGGGNDNLSGGSGNDVI 6015
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + G + +D + G + + +G D +G G D A + +
Sbjct: 6016 DGGDGADMLAGGADDDRLTGGAGADTLVGGTGRDSLEGGDGNDVLVGDAAADSGTV 6071
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ GDDLLD D+ G N T+ +
Sbjct: 5952 DDTLIGGTGRDELHGGDGDDLLDSRADVAGSGDYDV-------AYGEAGNDTLLGGGGND 6004
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G SGNDV+ G ++ + +D G +G DT + + ++
Sbjct: 6005 NLSGGSGNDVIDGGDGADMLAGGADDDRLTGGAGADTLVGGTGRDSLEGGDGNDVLVGDA 6064
Query: 330 ANEHKQ 335
A +
Sbjct: 6065 AADSGT 6070
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 4/175 (2%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I IEV P IY + G G ++ S + ++
Sbjct: 4817 IDGIEVNGVPFPGTNNIYYADGVSPYRWISEGNAYSWGVGTALPPPSPNEPAGDDVVSAG 4876
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G GND + G+S N+ +GND G +G D A L NA
Sbjct: 4877 NGNDVLSGGLGNDSLSGDSGNDTILGGAGNDTILGGTGSDEMHGGAGDDLIDNRDDPNAG 4936
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D + S + + + +++ + L G D
Sbjct: 4937 GINDVSYGG----SGNDTIYGGGGTDVAYGGTGNDLIDGGGGTDYLYGEDGADSV 4987
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 42/136 (30%), Gaps = 8/136 (5%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + TIY GDD LD GG + S G + +
Sbjct: 3687 YNVGDIIRGQGGNDTIYGYTGDDSLD----GGAGDDFLYAGTGDDSAEGGDGADALYGDV 3742
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G +GND + G + + G D G G D A + + A
Sbjct: 3743 GDDTLSGGAGNDSLYGEAGADSLSGGDGADFLSGGDGNDGLAGGAGADTLE----GGAGN 3798
Query: 327 VYDANEHKQDFLSDVE 342
D L +
Sbjct: 3799 DLLEGGDGDDILKGGD 3814
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 6/161 (3%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+D G G+D LD L G I S+G + ++++G G D +I
Sbjct: 750 FDGGAGNDTLDGGL--GSDTLIGGAGNDRLSVGNDYNGDYLDGGDGDDTLIGGMGADTLI 807
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + ++V GN+V G G+D Y A + I D LS +
Sbjct: 808 GGAGDDVLKGGGGNNVLIGGDGIDIADYSAETEAISIDLRTGE---LRHGGWMADRLSGI 864
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
E + + L + L G DV +
Sbjct: 865 ETILAGGGNDALAGDGGDNRLSGGVGDDSLSGGAGDDVLDG 905
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N TI +T +S+ G +G+D + + ++ G D G G DT A
Sbjct: 3693 IRGQGGNDTIYGYTGDDSLDGGAGDDFLYAGTGDDSAEGGDGADALYGDVGDDTLSGGAG 3752
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + A + DFLS D LE A + L
Sbjct: 3753 NDSL----YGEAGADSLSGGDGADFLSG------GDGNDGLAGGAGADTLEGGAGNDLLE 3802
Query: 373 QVIGQDVFES 382
G D+ +
Sbjct: 3803 GGDGDDILKG 3812
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 34/225 (15%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ GDD L + TL GG N I ++ G N ++ I+
Sbjct: 5699 GGAGNDALDGGAGDDTLTGDLGNDTLSGGAGNDILSGDAGDDTLDGGTGNDALSGGDGID 5758
Query: 270 SV---------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--- 317
S+ G +GND+++G + + G+DV G +G D A + +
Sbjct: 5759 SLSGGDGDDTLDGGAGNDLLLGEAGQDSLRGGDGDDVILGGAGNDILLGDAGNDTIRGGD 5818
Query: 318 -----IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV----NVKQRSILEYTASY 368
+ +++YD + L F D + +L +
Sbjct: 5819 GDDAIDGGAGDDLVIYDGGRDTVRGGGGNDTLLFGDGFAADQLYFARLDNNLVLRFRDRA 5878
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITF-DSYLYLGSYDDLR 412
E ++ + + R + F D L S LR
Sbjct: 5879 EQVVIANRFNGVGEGSAYL-------RTVRFQDGTEVLLSNPALR 5916
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY+ N +I +++ G +G+D++ G + ++ G+D G +G D+ A
Sbjct: 5121 LFGYKANDSIDGAGGNDTLYGYAGDDLLTGGAGADILDGGEGSDSLSGGTGNDSLIGGAG 5180
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + D LS
Sbjct: 5181 NDTL----IGGDGADTLSGGEGADSLSG 5204
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 4/124 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G+++ TI G+D + +GG + + S+ G N
Sbjct: 3485 GGTGDDLIDGRDDPGTDGARDTISGGDGNDTV----LGGGGSDVIFGGAGDDSLSGGGGN 3540
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I ++S+ G +G+D ++G + N+ +GND +G D Y S
Sbjct: 3541 DGIDGGDGVDSIDGGAGDDNILGGAGNDTLAGGAGNDTLFSGAGDDLIRYGGGSDTITNE 3600
Query: 320 RFEN 323
+
Sbjct: 3601 AGND 3604
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 56/186 (30%), Gaps = 19/186 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ GDD++ G + I + S I G E + +I +
Sbjct: 64 NDTLIGGSVNDSLDGGAGDDVISG---GTGNDVISGGDGADS-IDGGENDDSIDGGAGND 119
Query: 270 SVVGSSGNDVVIGNSANN------------VFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+++G G DVV+ ++ F +GND DG G DT A +
Sbjct: 120 TILGGGGRDVVMAGDGDDLVRDGDNVWSDDRFDGGAGNDTLDGGLGSDTLIGGAGNDRLT 179
Query: 318 IY-RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + ++ + +RL AD + + D
Sbjct: 180 VGNDYNGDVLDGGDGDDTLIGGMGADRL--ADGAGADLVQAGGGDDQLDHVLSDQAGADT 237
Query: 377 QDVFES 382
D
Sbjct: 238 LDGGAG 243
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 64/208 (30%), Gaps = 23/208 (11%)
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ DA +GY + V +YG G+++ + Y G
Sbjct: 5344 RGNGGTDAIYGYGGDDTLYGGDGVDTLYGGD----GDDLIDSRDETVSGDMA---YGEAG 5396
Query: 228 DDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
DD + D G + I+ N + S I G N +++ ++++G GND +
Sbjct: 5397 DDTIRGGSANDALYGGDGDDVIEGNAGNDS-IEGNAGNDSLSGGAGADTLMGGDGNDTLG 5455
Query: 282 GNSANNVFFES---------SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + N G D G G DT A + ++
Sbjct: 5456 GGAGANWIDTGVGDDLVLYQGGADTVVGGGGNDTLSVGAGYSRDDLRFERYGADLHLRFN 5515
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRS 360
K D + R A + +
Sbjct: 5516 GKPDRIVIANRFNGAGDGVKYLQTLLFD 5543
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 17/131 (12%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND +IG S N+ +G+DV G +G D + +++I
Sbjct: 58 LFGGAGNDTLIGGSVNDSLDGGAGDDVISGGTGNDVISGGDGADSIDGGENDDSIDGGAG 117
Query: 331 NE--------------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
N+ D + D + + D+ L+ + LI G
Sbjct: 118 NDTILGGGGRDVVMAGDGDDLVRDGDNVWSDDRF---DGGAGNDTLDGGLGSDTLIGGAG 174
Query: 377 QDVFESMKHFY 387
D +
Sbjct: 175 NDRLTVGNDYN 185
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 49/162 (30%), Gaps = 36/162 (22%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF---------------FESSGND 296
S+ G N TI ++++G +G+D + G + +++ + SGND
Sbjct: 4890 SLSGDSGNDTILGGAGNDTILGGTGSDEMHGGAGDDLIDNRDDPNAGGINDVSYGGSGND 4949
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D + + L D+L D +
Sbjct: 4950 TIYGGGGTDVAYGGTGNDLID-------------GGGGTDYLYG------EDGADSVLGG 4990
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRD 396
L A + L IG D + F EG D
Sbjct: 4991 AGADYLYGQAGDDTLDGGIGNDTIDGGAGDDLIRFTAGEGID 5032
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 8/201 (3%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQH 265
Y + + IY GDD LD GG Y + + + G + + T+
Sbjct: 4476 YNVGDLIQGLGGNDIIYGYAGDDTLDG-GAGGDAVY----GGAGADLLLGNDGDDTLFGD 4530
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G +G + + G + +NV G D+ S G D A K+Y
Sbjct: 4531 AGDDTLIGGAGINTLYGGAGDNVIRFDGGQDIVYNSGGNDIIELDASFDKAKLYFSRFGN 4590
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVK--QRSILEYTASYEDLIQVIGQDVFESM 383
+Y + D + +R A E + +IQ IG E +
Sbjct: 4591 DLYVRFTGRTDQIIVKDRFNGAGDGAAYAQTLRFADGSREDLTRKDLVIQTIGGAGGEKL 4650
Query: 384 KHFYEFGLSEGRDITFDSYLY 404
+ + +G+ Y Y
Sbjct: 4651 EGYNVGDTIDGQAGNDTIYGY 4671
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ GY N TI+ +++ G G+DV+ G + N+ F GND G SG D
Sbjct: 3932 TLEGYHANDTISGLGGADAIFGYGGDDVLDGGAGNDTLFGGLGNDRLIGGSGADRLEGGD 3991
Query: 312 PSYL 315
Sbjct: 3992 GDDT 3995
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 39/121 (32%), Gaps = 5/121 (4%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ +++ G + +D + G S ++V S +D DG +G D+ + + +
Sbjct: 587 GGSGADTLRGGAQSDRLYGGSGDDVLEGGSEDDTLDGGTGNDSLHGGSGAD---LLYGGM 643
Query: 324 AIIVYDANEHKQDFL--SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D S + L D ++ + + G D +
Sbjct: 644 GDDLLDGGTDANRLYGGSGDDTLLGGDVGDTLDGGSGDDVINGGIGADSIRGGSGDDRID 703
Query: 382 S 382
Sbjct: 704 G 704
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY TI +++ G G+D + G + N+ +G DV DG G D +
Sbjct: 4650 LEGYNVGDTIDGQAGNDTIYGYGGDDTLSGGADNDQVRGGAGTDVIDGGVGNDMVYGGDG 4709
Query: 313 SYLYKIYRFEN 323
S E+
Sbjct: 4710 SDTVIGGDGED 4720
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 34/109 (31%), Gaps = 4/109 (3%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + DV+ GN + + G+D G G+DT + L R E E
Sbjct: 5336 GYNAGDVIRGNGGTDAIYGYGGDDTLYGGDGVDTLYGGDGDDLID-SRDETVSGDMAYGE 5394
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + + L D +E A + L G D
Sbjct: 5395 AGDDTIRGGSANDALYGGDGDDVIEGNAGNDSIEGNAGNDSLSGGAGAD 5443
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
IQTI +GG+ L V + ID + +I GY + T++ + V G +G
Sbjct: 4638 VIQTIGGAGGEKL----EGYNVGDTIDGQAGND-TIYGYGGDDTLSGGADNDQVRGGAGT 4692
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
DV+ G N++ + G+D G G D + S
Sbjct: 4693 DVIDGGVGNDMVYGGDGSDTVIGGDGEDRLWGDEVSTT 4730
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 42/138 (30%), Gaps = 8/138 (5%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++YG G+++ Y GDD + G + D N
Sbjct: 4271 QLYG----GAGDDLIDNRDDTGAGASRNVAYGEAGDDTILGGDAGETFSGGDGNDR---- 4322
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + +S++G G+D + G + SG + G D Y
Sbjct: 4323 VEGNGGNDWLEGNAGNDSLLGGEGDDSLQGGDGADTLEGGSGTNSILTGLGDDVIRYSGG 4382
Query: 313 SYLYKIYRFENAIIVYDA 330
+ + +
Sbjct: 4383 RDTITNEGGSDVLEIRTG 4400
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 29/72 (40%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+++ +++ G +GND ++G ++ G D +G SG ++ + +
Sbjct: 4031 SLSGDAGNDTLYGDAGNDSLLGGEGDDSLRGGDGADTLEGGSGTNSILTGLGDDVIRYGG 4090
Query: 321 FENAIIVYDANE 332
+ I +
Sbjct: 4091 GRDTITNEGGRD 4102
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 14/118 (11%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI---ESVVGSSG------- 276
G DL+ G + I +N S S +T A T + E+ +
Sbjct: 3247 GGDLIVQVRATGRQIRI-VNHFSASDGTSGLAGLTFADGTTMPLGETAMLGGTGGDLLTG 3305
Query: 277 ---NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+D+++G ++ GND G G DT + +Y + + D
Sbjct: 3306 AATDDLLLGQDGDDRLSGGDGNDTLIGGIGNDTLDGGTGNDVYVYRIGDGRDFILDNG 3363
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
H E++ G + D++ G N++ + +G+D DG +G D + A + L + +
Sbjct: 4466 AHDWAETLEGYNVGDLIQGLGGNDIIYGYAGDDTLDGGAGGDAVYGGAGADLL-LGNDGD 4524
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ DA + + + L + + + + Y + D+I++
Sbjct: 4525 DTLFGDAGDDTLIGGAGINTL-YGGAGDNVIRFDGGQDIVYNSGGNDIIEL 4574
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 28/162 (17%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y I+ GGDD+LD TL GG+ N + + G + + T
Sbjct: 3936 YHANDTISGLGGADAIFGYGGDDVLDGGAGNDTLFGGLGNDRLIGGSGADRLEGGDGDDT 3995
Query: 262 IAQHTVIESVVGSSGND------------------VVIGNSANNVFFESSGNDVFDGSSG 303
+ + G +GND + G++ N+ + +GND G G
Sbjct: 3996 LEGGDDADLHYGGAGNDVIGGGGGGDYMEGGDGDDSLSGDAGNDTLYGDAGNDSLLGGEG 4055
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSD 340
D+ + + N+I+ ++ +D +++
Sbjct: 4056 DDSLRGGDGADTLEGGSGTNSILTGLGDDVIRYGGGRDTITN 4097
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 22/149 (14%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ +S+ G G D + G S N G+DV G DT
Sbjct: 4040 TLYGDAGNDSLLGGEGDDSLRGGDGADTLEGGSGTNSILTGLGDDVIRYGGGRDTITNEG 4099
Query: 312 PSYLYKI----------------------YRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ +I + I++ + + D S V+R+ FAD
Sbjct: 4100 GRDVLEIRIGLKREDLYFARFGNDLYLRFRDAGDEIVLTNRFKGAGDGASYVQRILFADG 4159
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + + ++
Sbjct: 4160 REVDLTDPALKLETLAHDWAETLEGYNVG 4188
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY--YAPSYLYKIYRFENAII 326
+ + G+ GND ++G + N+ +G+D DG +G D + +
Sbjct: 3454 DRIEGTGGNDTILGYAGNDTLIGGTGSDSIDGGTGDDLIDGRDDPGTDGARDTISGGDGN 3513
Query: 327 VYDANEHKQDFLSD 340
D +
Sbjct: 3514 DTVLGGGGSDVIFG 3527
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ GY I +++ G +G+D + G + ++ SG+D G +G D
Sbjct: 4181 TLEGYNVGDLIQGLGGKDTIYGYAGDDTLDGGAGSDSILGGSGDDSLIGGAGDDQLEGED 4240
Query: 312 PSYLYKIYRFENAIIVYDANE 332
+ L ++II N+
Sbjct: 4241 GNDLLLGGDGNDSIIGGAGND 4261
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 18/103 (17%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN------------------NVFFES 292
+S + + + +++ G +GND ++GN + N F
Sbjct: 2 TSTVTTDGDDLLTGDWRADTLRGGAGNDTLLGNDGDDVLEGGDGDDRLDGGTGANSLFGG 61
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+GND G S D+ A + + I D +
Sbjct: 62 AGNDTLIGGSVNDSLDGGAGDDVISGGTGNDVISGGDGADSID 104
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 10/122 (8%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
H E++ G + D++ G + + +G+D DG +G D+ + ++
Sbjct: 4175 AHDWAETLEGYNVGDLIQGLGGKDTIYGYAGDDTLDGGAGSDSILGGSGDDSLIGGAGDD 4234
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D N + L D + L + L G D+ ++
Sbjct: 4235 QLEGEDGN----------DLLLGGDGNDSIIGGAGNDTLLGGQGADQLYGGAGDDLIDNR 4284
Query: 384 KH 385
Sbjct: 4285 DD 4286
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 33/148 (22%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT------VIESVVGSS 275
I +GG+D + +G N + SI G + I +++ G
Sbjct: 3456 IEGTGGNDTI----LGYAGNDTLIGGTGSDSIDGGTGDDLIDGRDDPGTDGARDTISGGD 3511
Query: 276 GNDVVIGNSANNVFFESSGND------------------VFDGSSGLDTFFYYAPSYLYK 317
GND V+G ++V F +G+D DG +G D A +
Sbjct: 3512 GNDTVLGGGGSDVIFGGAGDDSLSGGGGNDGIDGGDGVDSIDGGAGDDNILGGAGNDTLA 3571
Query: 318 IYR-----FENAIIVYDANEHKQDFLSD 340
F A D +++
Sbjct: 3572 GGAGNDTLFSGAGDDLIRYGGGSDTITN 3599
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 39/155 (25%), Gaps = 24/155 (15%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ G D D + G + ++ A+
Sbjct: 1679 GGNDTLIGGAGADSLSGGAGLDTADYSASAGAVSV---------NLATGIGRGGDAEGDR 1729
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ G + +IG + + DG G D+ A + V
Sbjct: 1730 LD------GVENLIGTGLADSLTGDGAANYLDGRGGADSLAGGAGDDTLR---------V 1774
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D D S + LRF + + +
Sbjct: 1775 LDDGFASLDGGSGFDTLRFEGERLVVTGAGSGGVR 1809
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++ +G+D G G D + + +I + + D + D D +L
Sbjct: 6410 DDTLSGGAGDDTLAGGLGDDVYRFGRGGGHDRIVENDGDV---DNDRLVFDAGIDAHQLW 6466
Query: 346 FADQCIDSV 354
F+ D
Sbjct: 6467 FSKSGSDLE 6475
>gi|221134349|ref|ZP_03560654.1| Hemolysin-type calcium-binding region [Glaciecola sp. HTCC2999]
Length = 10022
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 68/189 (35%), Gaps = 12/189 (6%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS- 252
+YG GN+ + TIY G+D +D G DL + +
Sbjct: 9517 LYGRNSSIDGNDT------LLGNLGNDTIYGQSGNDSID-----GGSGNDDLRGGNENDT 9565
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + + + ++G G D + G + N+ +G+DV DG +G+D A
Sbjct: 9566 ITGGLGNDNLLGESGDDILIGGVGIDTLNGGAGNDTLTGGTGDDVIDGGAGVDVIDLSAA 9625
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S I ++ I D +++VE + +D + + L
Sbjct: 9626 SAALTIDFSDSTEISITDVNLGSDTVTNVEGVIGSDFADTMTGSDAAEVFGGGLGDDTLD 9685
Query: 373 QVIGQDVFE 381
G D +
Sbjct: 9686 GGEGVDTLD 9694
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 10/169 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ GG D+L+ + + G +DL+ + ++ G + + E
Sbjct: 7352 NDWISGGAGDDTLNAGGGIDVLNFSEVSGA-VTVDLDAGTVANDGQGGTDTI----SGFE 7406
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+V+G +GND + G++A +GND +G G DT F+ + I +
Sbjct: 7407 NVLGGTGNDNITGSAAAETIAGGAGNDTLNGGDGTDTVFFGFAANNMIINMATGVVT--- 7463
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D +S+ E + + + + + G+D
Sbjct: 7464 --GEGTDQISNFEIVVAGLANDSIIGTTGNDWVWGNDGDDTFVSGSGED 7510
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 61/174 (35%), Gaps = 4/174 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM-TIAQHTVI 268
++ G D++D++ +++ + + ++ Q T
Sbjct: 8455 SDTIAGGTGNDSLNGGSGIDVIDMSESTSS---LNIVLGNANDTITLSDDVLGDDQVTGF 8511
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E ++G ND++ GN++NN+ GND DG +G+DT + ++ +
Sbjct: 8512 EGIIGGQANDIITGNASNNIIGGGLGNDTLDGGAGIDTLDLSNANQTVEVDLNVTGAVTI 8571
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D + E + +++ ++ + G D +
Sbjct: 8572 ADGQGGFDVIRGFENITGGSASDILAGDNANNVIVGNGGFDTISGNGGNDNLSA 8625
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 61/188 (32%), Gaps = 11/188 (5%)
Query: 199 KGSLGNNIYKIEVQQKD--SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+GS GN+ K+ + + G + +D S ++ G
Sbjct: 2885 EGSAGNDTVSFAGSLKNWVVNLFSSDVTNNGQST--ASNSAQADTEVD-QLSSIENVTGG 2941
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N TI VVG +GNDV+ N + +G+D F G G D A
Sbjct: 2942 AGNDTIYGSDEANVVVGGAGNDVITANGGADTIDGGAGSDTFIGGLGADEIDGGAGIDQI 3001
Query: 317 KIYRFENAIIVYDANEHK------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
NA+ V AN D L+++E + + L A +
Sbjct: 3002 DYSATTNALTVDLANNTASGDDIDSDTLTNIENVSGGQAEDSITGDDNANELRGNAGSDT 3061
Query: 371 LIQVIGQD 378
L G D
Sbjct: 3062 LTGGAGND 3069
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 16/177 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ I+ + GDD L + G + TI
Sbjct: 2728 TADTGSDTLTSIENVVAGDGDDTLRGDSNTNQ-------------LEGGAGDDTIDGRQG 2774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++++G G+D +IG N+ + G D G +G DT Y + + +
Sbjct: 2775 ADTLIGGVGDDSIIGGEGNDRLRGNEGADTLSGGAGTDTADYSDEDSNVTVNLKDGSATD 2834
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L D+E + +++ + LI +G D E
Sbjct: 2835 ---GSGDTDILEDIENIAGGSGNDTLTGDDTNNVITGNEGDDTLIGGLGNDTLEGSA 2888
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 10/175 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ T+ G+D + D G + +D + +I + I
Sbjct: 3371 DDSINAGAGNDTVISGDGNDTVIAEDGDDSLNTGSGDDSVDSGAGAD-TIEAGTGDDIIR 3429
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G+D+V ++ +GND DG+SG D Y + I
Sbjct: 3430 GGAGDDEINAGDGDDIVDAGFGDDTVIGGAGNDTLDGNSGRDLLDYSTETGDADINLNTG 3489
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
V DA + D +++ E + ++++ A + + + G D
Sbjct: 3490 ---VVDAPDSGTDTVTNFEDVTAGSGDDTITGGINSNVIDGGAGADSISTLSGDD 3541
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ G+D+L I N +DL + G+ TI + E+V+GSS ND +
Sbjct: 9249 TLIGGEGNDILSFANITAAVN-VDLTQNLILN-DGFSNEETI---SGFETVIGSSANDTI 9303
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN------EHK 334
G+ A + SGND F G++G DT S +E +I+ AN +
Sbjct: 9304 KGSEAADELNGQSGNDYFYGTAGNDTIIGGLGSDTIDYSAYEGNLIIDLANQTVVKDNGE 9363
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D L +E +RFA DS+ + + Y D +
Sbjct: 9364 VDTLVGIEFVRFAGAGDDSIVGSNSNEVIYAGQGNDTV 9401
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 23/192 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + T+ G D D + ++L S + G + IE
Sbjct: 2793 NDRLRGNEGADTLSGGAGTDTADYSDE-DSNVTVNLKDGSATDGSGDTDILED-----IE 2846
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY---------- 319
++ G SGND + G+ NNV + G+D G G DT A +
Sbjct: 2847 NIAGGSGNDTLTGDDTNNVITGNEGDDTLIGGLGNDTLEGSAGNDTVSFAGSLKNWVVNL 2906
Query: 320 -------RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ + + D LS +E + + +++ A + +
Sbjct: 2907 FSSDVTNNGQSTASNSAQADTEVDQLSSIENVTGGAGNDTIYGSDEANVVVGGAGNDVIT 2966
Query: 373 QVIGQDVFESMK 384
G D +
Sbjct: 2967 ANGGADTIDGGA 2978
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 5/171 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I G D++DL+ ++ S + T+ T +E
Sbjct: 9599 NDTLTGGTGDDVIDGGAGVDVIDLSAASAALTIDFSDSTEISITDVNLGSDTV---TNVE 9655
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFENAIIV 327
V+GS D + G+ A VF G+D DG G+DT + + + I A +
Sbjct: 9656 GVIGSDFADTMTGSDAAEVFGGGLGDDTLDGGEGVDTLDFSRATSGVTFSIAANIGATVT 9715
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D +S+ E + + +++ A + +I G D
Sbjct: 9716 VADGQGGTDTVSNFENVTGGAGNDIFTGDENGNLISGGAGNDTIIDGDGLD 9766
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 1/150 (0%)
Query: 230 LLDLTLIGGVKNYIDLNT-ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+DL + ID +T + ++ G + +I + G++G+D + G + N+
Sbjct: 3011 TVDLANNTASGDDIDSDTLTNIENVSGGQAEDSITGDDNANELRGNAGSDTLTGGAGNDT 3070
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
G DV G GLDT + + I ++ + D L +E +
Sbjct: 3071 LIGGQGTDVLRGGEGLDTASFADVTGPITIDLSLGTVVTSAGSNAGADTLESIENVIGTG 3130
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + ++ + + G D
Sbjct: 3131 STDTIIGSDDANRIDGAGGADTVDAGAGND 3160
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 56/198 (28%), Gaps = 13/198 (6%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
++ I G+D + + N + SI N + ++V G +G+D
Sbjct: 7854 VENIVTGFGEDTITGSTNAETIN----SAGGSDSINAGAGNDVVLSGDENDTVDGGAGDD 7909
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEH 333
+ G + N+ G D G SG DT A + +
Sbjct: 7910 RLEGQNGNDSLSGGIGADTLLGGSGQDTLRGEAGDDSIDGGNESDLIYGGDGSDTLSGGA 7969
Query: 334 KQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D L + ++ D + + +Y + D
Sbjct: 7970 GSDTLFGGAGDDSFSHSNSGTDRIYGEAGDDSLSYTAYNSANGTVLFDGGAGNDTLVLVD 8029
Query: 391 LSEGRDITFDSYLYLGSY 408
S R TFD Y+
Sbjct: 8030 QSTKR-FTFDDSAYVRLN 8046
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 8/165 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D T G + + + S + G E + ++ ++V G +GND
Sbjct: 2440 DTVTGGAGNDT---TTGGAGNDTVSGDAGDDS-VDGGEGDDSVDGGAGNDTVNGGAGNDT 2495
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD--- 336
V+G N+ G+D G DT Y L + ++V DA
Sbjct: 2496 VLGGEGNDSIDGGLGSDSITAGDGDDTIIYDRNDVLIDGGAGTDTLVVNDAEVDFTTISS 2555
Query: 337 -FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L ++E + + + + + S+ T S ++ V G D+
Sbjct: 2556 PVLHNIEIIDLSGPNASQITLNEASVFAITDSDPAVLTVNGNDLD 2600
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 61/169 (36%), Gaps = 8/169 (4%)
Query: 222 IYDSG-GDD---LLDLTLIGGVKNYIDLNT---ESWSSIGGYEKNMTIAQH-TVIESVVG 273
++D G G D +LD IDLNT ++S + N+ + T E ++G
Sbjct: 8848 VFDGGEGLDAYAVLDNYSPTNSGFDIDLNTNWQANFSYYDNNQSNVLMDITLTNFEGLIG 8907
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S ND + G +++ GND G G+DT Y V +
Sbjct: 8908 GSYNDTITGTDGSDIIGGYRGNDSLTGGDGIDTLTYGWNGSGNGATVNLGTNTVTNDGYG 8967
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D +S E L + + + + +I +G D ++
Sbjct: 8968 TVDTISGFENLSGGRGADNLTGSDGDNEIRGDWGNDTIIATLGNDTYDG 9016
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 8/170 (4%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM-------TIAQHTVIES 270
T+ G D LDL+ +DLN +I + I + +
Sbjct: 8537 GNDTLDGGAGIDTLDLSNANQT-VEVDLNVTGAVTIADGQGGFDVIRGFENITGGSASDI 8595
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G + N+V++GN + + GND G D+ + + I D
Sbjct: 8596 LAGDNANNVIVGNGGFDTISGNGGNDNLSAGIGNDSVSGGTGNDTISGGEGNDTISGGDG 8655
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N+ D A N ++ Y+ + IG D+
Sbjct: 8656 NDFVDGNQGDDSIYTGAGNDRVDENNDGNDTIDVGDGYDSVYAGIGNDLV 8705
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 9/162 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIG------GYEKNMTIAQHTVIESVVGSSGNDV 279
G ++ T + N +++ + I G N T+ + + + G G+D
Sbjct: 2615 DGYNVYTGTTVNSDNNTVNVTLNIFRDITVAQTQTGGTDNDTLTGTSGSDILQGFGGDDS 2674
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN---EHKQD 336
++G + N+ +G+D G +G+DT Y + + D N + D
Sbjct: 2675 LMGEAGNDTLQGGAGDDELIGGTGIDTADYTDETANISVDLDAGTSGATDPNETADTGSD 2734
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
L+ +E + D + LE A + + G D
Sbjct: 2735 TLTSIENVVAGDGDDTLRGDSNTNQLEGGAGDDTIDGRQGAD 2776
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 5/151 (3%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSS 252
G + + + + + T+ G D LD + GV I N + +
Sbjct: 9656 GVIGSDFADTMTGSDAAEVFGGGLGDDTLDGGEGVDTLDFSRATSGVTFSIAANIGATVT 9715
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + + E+V G +GND+ G+ N+ +GND GLDT +
Sbjct: 9716 VADGQGGTDTVSN--FENVTGGAGNDIFTGDENGNLISGGAGNDTIIDGDGLDTIYGGDG 9773
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + + Y + S+ +
Sbjct: 9774 NDTFVVSVDSHRDTFYGGDGIDIIDFSNFDD 9804
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 8/146 (5%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D GG N S+ G + ++ +SV G +GND
Sbjct: 1969 DTVTGGAGNDT----TTGGAGNDTVSGEAGDDSVSGGTGDDSVDGGEGDDSVDGGAGNDT 2024
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ---- 335
V G + N+ G D SG DT Y A L + +++ D+
Sbjct: 2025 VNGGAGNDSIDGGEGADSIAAGSGNDTIIYDANDVLIDGQAGTDTLLIQDSEVDLTLVDD 2084
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSI 361
L ++E ++ + S+ + +
Sbjct: 2085 AILKNIEVIQLDNNSGVSLTINGTDL 2110
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 13/195 (6%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+L + I E + +GG +D + TL + + ++ G
Sbjct: 8285 NGGALNDTIIGGEGDDSIDGGAENDLLTGGAGNDTIVETLSNSGDDTLRGQDGDD-TLDG 8343
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES-------SGN--DVFDGSSGLDT 306
N +I +S++G+SG+D + G + + G+ D +G SG DT
Sbjct: 8344 GVGNDSIGGDDGADSILGNSGDDSIKGGTGADFIDGGNDQDSIFGGDDADTINGGSGNDT 8403
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F A N + A + + S L + V +
Sbjct: 8404 VFGDAGDDSISAGA-GNDTVYGGAGDDEIAGSSGNNYLAGGEGVDTIVGGSGSDTIAGGT 8462
Query: 367 SYEDLIQVIGQDVFE 381
+ L G DV +
Sbjct: 8463 GNDSLNGGSGIDVID 8477
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 21/197 (10%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++I + GG+D D G + I+ + + ++ G + +I+
Sbjct: 8357 DSILGNSGDDSIKGGTGADFIDGGNDQ-DSIFGGDDADTINGGSGND-TVFGDAGDDSIS 8414
Query: 264 QHTVIESVVGSSGNDVVIGNSANN---------VFFESSGNDVFDGSSGLDTFFYYAPSY 314
++V G +G+D + G+S NN SG+D G +G D+ +
Sbjct: 8415 AGAGNDTVYGGAGDDEIAGSSGNNYLAGGEGVDTIVGGSGSDTIAGGTGNDSLNGGSGID 8474
Query: 315 LYK----------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ + N I + D ++ E + +I+
Sbjct: 8475 VIDMSESTSSLNIVLGNANDTITLSDDVLGDDQVTGFEGIIGGQANDIITGNASNNIIGG 8534
Query: 365 TASYEDLIQVIGQDVFE 381
+ L G D +
Sbjct: 8535 GLGNDTLDGGAGIDTLD 8551
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 17/211 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---------- 249
+ G+ I T+ +G D L+ + ++L T S
Sbjct: 7702 STFGDTISVNNSSVDGGAGDDTLTGAGSSDTLNY-VSATANITVNLTTGSATDEHGDTDT 7760
Query: 250 ---WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++ N + ES +GND V ++V ++GNDV DG +G DT
Sbjct: 7761 LSGFETVRTGSGNDNVTGSDANESFYSGTGNDTVNAGDGDDVICVNTGNDVIDGGAGNDT 7820
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ A + + + A++ +++VE + +
Sbjct: 7821 VNF-ATELPFTAILIDLSNSSGVASDIGTKIITNVENIVTGFGEDTITGSTNAETINSAG 7879
Query: 367 SYEDLIQVIGQDV--FESMKHFYEFGLSEGR 395
+ + G DV + G + R
Sbjct: 7880 GSDSINAGAGNDVVLSGDENDTVDGGAGDDR 7910
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Query: 273 GSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +GND + G NS N+ +GND G SG DT Y + + +A V
Sbjct: 7627 GGAGNDTLTGGNSRNDTLVGGAGNDSLVGGSGFDTADYTNAASAITVDMSLSAGQVSTDG 7686
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D L+ +E ++ + S ++ A + L D
Sbjct: 7687 DGGADTLNGIEHIQGS--TFGDTISVNNSSVDGGAGDDTLTGAGSSDTLN 7734
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 60/208 (28%), Gaps = 27/208 (12%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------------LTLIGGVKNYIDL 245
+LG+ + + TI G D L D
Sbjct: 9055 NVTLGDT--DDSITLASNNAAVTISGGDGVDTLTYISDANLSITNFAFGATTANTLTPDG 9112
Query: 246 NTESWSSIGGYE---KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---- 298
N +++SI + N +A + G +G+D + G + + +GND+
Sbjct: 9113 NRHTYTSIEQFVSGAGNDNLAASAGAANFDGGAGDDTINGTANADTLMGGAGNDLINVTA 9172
Query: 299 -----DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
DG G+D A + I + + L++ E +
Sbjct: 9173 GDDSLDGGEGIDALNISAATNDVNIDLSTDWESTLTVTGLGSNTLTNFEGVLAGSGDDAI 9232
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ + LI G D+
Sbjct: 9233 TGSDGDDVIGGGDGVDTLIGGEGNDILS 9260
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 11/142 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD--------LTLIGGVKNYIDLNTESWSSIGG-YEKNM 260
S +TI G+D L+ I++ T + G N
Sbjct: 7414 NDNITGSAAAETIAGGAGNDTLNGGDGTDTVFFGFAANNMIINMATGVVTGEGTDQISNF 7473
Query: 261 TIA-QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I +S++G++GND V GN ++ F SG D G SG DTF + ++
Sbjct: 7474 EIVVAGLANDSIIGTTGNDWVWGNDGDDTFVSGSGEDTLYGGSGNDTFVLTDDEFNDSVF 7533
Query: 320 RFENAIIVYDANEHKQDFLSDV 341
E D + +D ++
Sbjct: 7534 GGEG-FDTLDLSAITRDLNENI 7554
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 14/163 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T G+D + + S+ G E N T+ +
Sbjct: 2394 NDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTG----GGDGDDSVDGGEGNDTVTGGAGND 2449
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +GND V G++ ++ G+D DG +G DT A + ++
Sbjct: 2450 TTTGGAGNDTVSGDAGDDSVDGGEGDDSVDGGAGNDTVNGGAGND----------TVLGG 2499
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D + + D + + +++ A + L+
Sbjct: 2500 EGNDSIDGGLGSDSITAGDGDDTIIYDRNDVLIDGGAGTDTLV 2542
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 66/200 (33%), Gaps = 14/200 (7%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G++I + T+ + G DLLD + G I+LNT +
Sbjct: 3438 NAGDGDDIVDAGFGDDTVIGGAGNDTLDGNSGRDLLDYSTETG-DADINLNTGVVDAPDS 3496
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T E V SG+D + G +NV +G D SG DT + A +
Sbjct: 3497 GTDTV-----TNFEDVTAGSGDDTITGGINSNVIDGGAGADSISTLSGDDTVIFDAQDTV 3551
Query: 316 YKIYRFEN----AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT-ASYED 370
+ + D D + VE + SV + +L ++ S +
Sbjct: 3552 DMGIGIDTLAIQTTTLVDFANIDDDQFTGVEEIDLTGNGGQSVAMTDDDVLNFSDTSNQI 3611
Query: 371 LIQVIGQDVFESMKHFYEFG 390
++ D + G
Sbjct: 3612 VVHGDNTDALTLTGRWVADG 3631
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 4/117 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T G+D + + S+ G E N T+ +
Sbjct: 1599 NDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTG----GGDGDDSVDGGEGNDTVTGGAGND 1654
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ +G +GND V G++ ++ G+D DG G DT A + + +
Sbjct: 1655 TTIGGAGNDTVSGDAGDDSTGGGEGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVS 1711
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 215 DSPFIQTIYDS-GGDDLLDL--TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ TI D GG D++ + GG + I + + I G TI+ + +++
Sbjct: 8564 NVTGAVTIADGQGGFDVIRGFENITGGSASDILAGDNANNVIVGNGGFDTISGNGGNDNL 8623
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
GND V G + N+ GND G G D + + D N
Sbjct: 8624 SAGIGNDSVSGGTGNDTISGGEGNDTISGGDGNDFVDGNQGDDSIYTGAGNDRV---DEN 8680
Query: 332 EHKQDFL 338
D +
Sbjct: 8681 NDGNDTI 8687
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 4/117 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T G+D + + S+ G E N T+ +
Sbjct: 1788 NDTVTGGAGSDTTLGGAGNDTVSGDAGDDSTG----GGDGDDSVDGGEGNDTVTGGAGND 1843
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ G +GND V G++ ++ G+D DG G DT A + + +
Sbjct: 1844 TTTGGAGNDTVSGDAGDDSTGGGEGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVS 1900
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 8/152 (5%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D GG N S GG + + ++ ++V G +GND
Sbjct: 958 DTVTGGAGNDT----TTGGAGNDTISGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDT 1013
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV----YDANEHKQ 335
VIG + ++ G D SG DT + A L + +I+ D N+
Sbjct: 1014 VIGGTGDDSIDGGEGADSIAAGSGNDTIIFDANDLLVDGQTGTDTLIIQEDTLDLNDVNN 1073
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
D + ++E ++ + + ++ + ++ S
Sbjct: 1074 DIIKNIEIIQLQNDSGVAFSMSETDLVALLES 1105
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 72/256 (28%), Gaps = 26/256 (10%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
DI + A G++ + Q + I +G D L G + L
Sbjct: 8204 DITIDLGLTSAQNTGEGSDTFTNFEQVQGGDGKDAI--TGRLDADTLRGGDGRDTILGLA 8261
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ I G + +I +S+ G + ND +IG ++ + ND+ G +G DT
Sbjct: 8262 GDDV--IEGEDGRDSIDGGLGADSINGGALNDTIIGGEGDDSIDGGAENDLLTGGAGNDT 8319
Query: 307 FFYYAPSYLYKIYRFENAIIVYDA-----------------NEHKQDFLSDVERLRFADQ 349
+ R ++ D D + F D
Sbjct: 8320 IVETLSNSGDDTLRGQDGDDTLDGGVGNDSIGGDDGADSILGNSGDDSIKGGTGADFIDG 8379
Query: 350 CIDSVNV---KQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDITFDSYLY 404
D ++ + + + + G D + G + Y
Sbjct: 8380 GNDQDSIFGGDDADTINGGSGNDTVFGDAGDDSISAGAGNDTVYGGAGDDEIAGSSGNNY 8439
Query: 405 LGSYDDLRNVFGSDRG 420
L + + + G
Sbjct: 8440 LAGGEGVDTIVGGSGS 8455
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 10/193 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-KNYIDLNTESWSSIG 254
G + G +++ + + S + L + G Y ++ +S
Sbjct: 7250 GNDTFAGGAGSDTLDLSNLSAGVSDSSTFSHSNSQLQFSGAGSELGRYTNIEEFIFSDNA 7309
Query: 255 GYE--KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + ++V GSS ND V G + ++ ++GND G +G DT
Sbjct: 7310 DTIVVSGVKVHLGGGNDTVSGSSLNDTVFGEAGDDSIVTNNGNDWISGGAGDDTLNAGGG 7369
Query: 313 SYLYKIYRFENAI-------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ A+ V + + D +S E + + +
Sbjct: 7370 IDVLNFSEVSGAVTVDLDAGTVANDGQGGTDTISGFENVLGGTGNDNITGSAAAETIAGG 7429
Query: 366 ASYEDLIQVIGQD 378
A + L G D
Sbjct: 7430 AGNDTLNGGDGTD 7442
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 20/214 (9%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKI-EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ D A+++ + ++ N Y + S T+ + D +D G
Sbjct: 8060 LDLDSQAIREFAPSTNATVDNTTYNAQTILVVTSTSADTLVNLTDIDWVD----TGDTTT 8115
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++ ++ + + +A + V ++ G GND V+G + + GND G
Sbjct: 8116 VNGGETTYRIFQYGNEGIFVATNAV-TALFGDRGNDSVVGTESADSINAGVGNDTILGFG 8174
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANE--------------HKQDFLSDVERLRFAD 348
G DT + ++ I ++ D ++ E+++ D
Sbjct: 8175 GDDTIISGRGDDVVDGGDGDDEIRFVTTSDITIDLGLTSAQNTGEGSDTFTNFEQVQGGD 8234
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L + ++ + G DV E
Sbjct: 8235 GKDAITGRLDADTLRGGDGRDTILGLAGDDVIEG 8268
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 17/191 (8%)
Query: 200 GSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIGG 255
GN+ + I G+D ++ T + IDL S+ G
Sbjct: 7787 SGTGNDTVNAGDGDDVICVNTGNDVIDGGAGNDTVNFATELPFTAILIDL-----SNSSG 7841
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ T +E++V G D + G++ + G+D + +G D +
Sbjct: 7842 VASDIGTKIITNVENIVTGFGEDTITGSTNAETINSAGGSDSINAGAGNDVVLSGDENDT 7901
Query: 316 YKIYRFENAIIVYDANEH-----KQDFL---SDVERLRFADQCIDSVNVKQRSILEYTAS 367
++ + + N+ D L S + LR + ++
Sbjct: 7902 VDGGAGDDRLEGQNGNDSLSGGIGADTLLGGSGQDTLRGEAGDDSIDGGNESDLIYGGDG 7961
Query: 368 YEDLIQVIGQD 378
+ L G D
Sbjct: 7962 SDTLSGGAGSD 7972
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 20/182 (10%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ D + IYG GN+ + + V F Y G D++D + +
Sbjct: 9759 IIDGDGLDTIYGGD----GNDTFVVSVDSHRDTF----YGGDGIDIIDFSNFDDGIST-- 9808
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + + + +E ++ GND + + ++ +GND+ G
Sbjct: 9809 --GFYFQTNDTRVLTVNNVNYQNVEGIIAGDGNDNLRFSGSDAYIDGGAGNDIMTAFGGN 9866
Query: 305 DTFFYYAPSYLY------KIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNV 356
DTF I F++ + D + E L FA + + +++
Sbjct: 9867 DTFIGGLGQDTIDAGAGNDIIHFDSDAVDSIQASSGTDTILFNTTETLDFASETLVNIDN 9926
Query: 357 KQ 358
+
Sbjct: 9927 AE 9928
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 70/214 (32%), Gaps = 32/214 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA G+ TIY + G ++ + + L+ + +S G
Sbjct: 6882 GAQWLDTGDTT-----TVNGGSTTFTIYQASGKNI--FVITTLTPVIVSLSAVADTSTTG 6934
Query: 256 YE---------------KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ N TI + + G GNDV++G + N+V ++GND
Sbjct: 6935 NDVIYGESGADTFVADSGNDTIYAGAGSDDIAGGEGNDVIVGAAGNDVIAGNAGNDFITA 6994
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLR---FADQC 350
+G DT + +I V + + D S++E ++ AD
Sbjct: 6995 GTGDDTIDGGDDTDTLSYANNGQSIAVSYTNATDGNVSGQGSDEFSNIEHIQGTSQADTY 7054
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
S +++ + I G D +
Sbjct: 7055 TASTAGNTFTVINARGGNDSFIGGAGTDTLDLSG 7088
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + G IDL+ + + G + IE+V+G+ D +IG+
Sbjct: 3085 GLDTASFADVTG-PITIDLSLGTVVTSAGSNAGADTLES--IENVIGTGSTDTIIGSDDA 3141
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF------ENAIIVYDANEHKQDFLSD 340
N + G D D +G DT + + +++ + D + + ++
Sbjct: 3142 NRIDGAGGADTVDAGAGNDTVVFDEDDGMVDGGAGIDALEVGSSVSLLDLTVTRDEIYTN 3201
Query: 341 VERLRFADQCIDSVNVKQRSILE 363
E++ + + + + I
Sbjct: 3202 FEQIDLSAEGAQILKLSDSDIRN 3224
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D + I+ + + + I T ++V G GND G+ +
Sbjct: 503 GSDQEDSVSGSAQGDTIN-AAGGNDFVDAGKGDDVIDAGTGDDTVSGGDGNDSTSGDEGD 561
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +GND G G DT
Sbjct: 562 DSVEGGAGNDTVTGGIGSDTTLGGEGDDTVS 592
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 40/135 (29%), Gaps = 8/135 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---- 307
+ G + TIA +S+ G +GND V G N+ +GND G +G D+
Sbjct: 2189 TYNGEGGDDTIAGEEGNDSLDGDTGNDSVDGGEGNDTVTGGAGNDTTTGGAGNDSVSGDA 2248
Query: 308 ----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
N + A + + + + ++
Sbjct: 2249 GDDSTGGGDGDDTVDGGEGNDTVTGGAGNDTTIGGAGNDTVSGDAGDDSTGGGDGDDTVD 2308
Query: 364 YTASYEDLIQVIGQD 378
+ + G D
Sbjct: 2309 GGEGNDTVTGGAGND 2323
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 10/163 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + + I DL T + S G + T+ +S +G+D ++ N
Sbjct: 3287 DGIAVGFIFVSGEDADLTTATDGSDEYTGNGGDDTLLAGGGDDSADAGAGDDSIVAGEGN 3346
Query: 287 NVFFESSGNDVFDG-------SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ +GND+ G SG D+ A + I N ++ + + + S
Sbjct: 3347 DTVSGGTGNDIIYGGDNPDAEGSGDDSINAGAGNDTV-ISGDGNDTVIAEDGDDSLNTGS 3405
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + I+ A +++ G D+ ++
Sbjct: 3406 GDDSVDSGAGADTIEAGTGDDIIRGGAGDDEINAGDGDDIVDA 3448
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 44/166 (26%), Gaps = 10/166 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSI--GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + + G I + SS+ TI +++ G G+D V G N
Sbjct: 1135 DNANYNVFGFDGLEIFVRENIGSSVVFPTTPGADTIPGTRSDDTIDGGEGDDSVDGGEGN 1194
Query: 287 NVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ +GND G +G DT N + +
Sbjct: 1195 DTVTGGAGNDTTTGGAGNDTVSGDEGDDSTGGGDGDDSVDGGAGNDTVSGGSGNDTTTGG 1254
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + ++ + + G D
Sbjct: 1255 AGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTGGA 1300
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ GS+G+D V G+ N+V G D G +G DT Y A L + ++
Sbjct: 3682 LNGSAGDDTVRGDDGNDVIDGGDGADTIRGEAGDDTIIYDASDVLIDGGTGTDTLLFVGQ 3741
Query: 331 NE 332
NE
Sbjct: 3742 NE 3743
Score = 43.6 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 39/106 (36%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G + T+ + + G G D + G + ++ + + + DG +G DT
Sbjct: 3676 DGDDNDLNGSAGDDTVRGDDGNDVIDGGDGADTIRGEAGDDTIIYDASDVLIDGGTGTDT 3735
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ + L + + + + E + D+ A+ +
Sbjct: 3736 LLFVGQNELLDFTQADRSNTDGNRPEVANIEIIDLHGTGAANNTLI 3781
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 23/166 (13%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGND-----------------VVIGNSANNVFFESSGND 296
G + IA +++ + + ND ++ G + N+ G+D
Sbjct: 3840 GDVVATLIIADTVSVQNAIVGTDNDDVMILTGGTHDTTINPELIEGRAGNDSINGQGGSD 3899
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+ G +G DT + A L N + D N + + ++E + A +
Sbjct: 3900 LIKGGAGNDTIVFDAADVLIDGGADTDILNILSDVDLNNVDDNKIINIETVNLAANT--T 3957
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ +L +S L+ ++ E +G + TF
Sbjct: 3958 LTAAGSDLLALNSSDSLLVTGDATSTLALQGNWVE-AADDGTNTTF 4002
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 27/184 (14%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T ++ G LLD + + V D N +S ++T G
Sbjct: 7191 DTFVNNAGTALLDFSNVS-VGVEFDANGGEITSSETGTDSIT--------------GEFT 7235
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTF---FYYAPSYLYKIYRFENAIIVYDANEHKQD 336
IG N+ F SGND F G +G DT A + N+ + + +
Sbjct: 7236 FIGTVHNDTFVAGSGNDTFAGGAGSDTLDLSNLSAGVSDSSTFSHSNSQLQFSGAGSELG 7295
Query: 337 FLSDVERLRFADQ-------CIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFY 387
+++E F+D + + ++ + + G D + +
Sbjct: 7296 RYTNIEEFIFSDNADTIVVSGVKVHLGGGNDTVSGSSLNDTVFGEAGDDSIVTNNGNDWI 7355
Query: 388 EFGL 391
G
Sbjct: 7356 SGGA 7359
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 7/177 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
++ G D L+++ N IDL + W S + T E V+ SG+D
Sbjct: 9175 DSLDGGEGIDALNISAATNDVN-IDL-STDWESTLTVTGLGSNTL-TNFEGVLAGSGDDA 9231
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G+ ++V G D G G D + + + +N ++ + ++ +S
Sbjct: 9232 ITGSDGDDVIGGGDGVDTLIGGEGNDILSFANITAAVNVDLTQN--LILNDGFSNEETIS 9289
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
E + + + L + + G D + ++ EG
Sbjct: 9290 GFETVIGSSANDTIKGSEAADELNGQSGNDYFYGTAGNDTIIGGLGSDTIDYSAYEG 9346
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 28/69 (40%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ +D+++G+ + SSG+D G G D + + + ++ N
Sbjct: 5912 GTTDDDLLLGDYNADRISGSSGDDTIYGLGGADIIRGGEGDDVIGLTGLDFILLDGGTNN 5971
Query: 333 HKQDFLSDV 341
D L +
Sbjct: 5972 AGGDTLEFI 5980
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 58/198 (29%), Gaps = 26/198 (13%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLN 246
+L Y I++ + + D GD D++ + I D +
Sbjct: 6661 NFSTLTVQDYGIQILGTGTGEWTALGDIDGDGFADVSFSNNTSSNIFYGSQVLSGTRDAS 6720
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSS-----GNDVVIGNSANNVFFESSGNDVFDGS 301
+ + + ++++ + G + G D +IGN N+ G DV G
Sbjct: 6721 LGNLGNGNDVVQVISVSAGGTLTGARGDNPVALFGQDRLIGNVGNDTLISDGGADVLIGG 6780
Query: 302 SGLDT--------FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+G D F S + + + D N + + +E +
Sbjct: 6781 AGDDALTIVDDNFFRLDGGSGIDTLTLKGDMS--LDMNSASSNSVESIEIISLGTDTQAL 6838
Query: 354 VNVKQRSILEYTASYEDL 371
+ + +
Sbjct: 6839 TLSDLDVLNMTNGTNTAV 6856
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ GS G D + G + +++ ++G D G G DT Y A +I
Sbjct: 4198 VGDDATSDTLTGSDGADFLDGKAGDDLIDGAAGADENFGGDGDDTVVYDAAD---RIIHG 4254
Query: 322 ENAIIVYDANEHKQDFLSDVERL 344
N V + ++D E +
Sbjct: 4255 GNEDEVGGQDNDTLRVVTDGEII 4277
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 61/225 (27%), Gaps = 39/225 (17%)
Query: 198 PKGSLG----NNIYKIEVQQKDSP-----------FIQTIYDSGGDDLL-----DLTLIG 237
+ G + + T+ G+D + T+ G
Sbjct: 1842 NDTTTGGAGNDTVSGDAGDDSTGGGEGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSG 1901
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV----------------- 280
+ + S+ G E N T+ ++ +G +GND V
Sbjct: 1902 DAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTIGGAGNDSVSGDAGDDSTGGGDGDDT 1961
Query: 281 -IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
G N+ +GND G +G DT A +++ + + D +
Sbjct: 1962 VDGGEGNDTVTGGAGNDTTTGGAGNDTVSGEAGDDSVSGGTGDDS-VDGGEGDDSVDGGA 2020
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + + + +I + +
Sbjct: 2021 GNDTVNGGAGNDSIDGGEGADSIAAGSGNDTIIYDANDVLIDGQA 2065
Score = 40.5 bits (93), Expect = 0.90, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIY 319
+++VG +GND + G + + SG+D DG G DT +
Sbjct: 4041 QTLVGLNGNDEIDGGAGVDTLLGGSGDDDLIYDENDGNIDGGEGNDTLVISGNGVTLDLP 4100
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+N++I + ++ + D S +
Sbjct: 4101 EIDNSLINNVESIDLTGTGNNTAVVNADDVQAISTSTNT 4139
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 25/210 (11%), Positives = 49/210 (23%), Gaps = 39/210 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T G+D + + S+ G N T+ T +
Sbjct: 1689 NDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTG----GGDGDDSVDGGAGNDTVTGGTGSD 1744
Query: 270 SVVGSSGNDVVIGNSANNVFF---------------------------ESSGNDVFDGSS 302
+ +G G+D V G + N+ F +G+D G +
Sbjct: 1745 TTLGGEGDDTVSGGAGNDTVFGDAGDDSVDGGDGDDSVDGGEGNDTVTGGAGSDTTLGGA 1804
Query: 303 GLDTF--------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
G DT N + A + + + +
Sbjct: 1805 GNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTG 1864
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++ + + G D
Sbjct: 1865 GGEGDDSVDGGEGNDTVTGGAGNDTTTGGA 1894
Score = 37.8 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 11/102 (10%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + + +G D+ DG G D + A + YDA++ + S
Sbjct: 4369 ITGTTGQDAIKSGAGADIIDGGEGADIIYGEAGDD----------TVTYDADDLRVFGGS 4418
Query: 340 DVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ L D+ ID +L A DL ++ V
Sbjct: 4419 GIDTLIIKDEDTIDGGADNTNDLLNTDAGDVDLSAIVPDTVE 4460
>gi|296480355|gb|DAA22470.1| interstitial collagenase precursor [Bos taurus]
Length = 469
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 59/197 (29%), Gaps = 53/197 (26%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W N + Y+ + T D+ + A WS V LTF + S +DI
Sbjct: 108 RWENTNLTYRIENYTPDLSRADV-------DQAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD + W + L A HE
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWTSNF-QDYNLYRVAAHE 219
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMV 185
GH+LGL H +M SY D +
Sbjct: 220 FGHSLGLAHSTDIGA-------------------LMYPSYTFSGDVQLSQ---------- 250
Query: 186 SDIVAVQKIYGAPKGSL 202
DI +Q IYG +
Sbjct: 251 DDIDGIQAIYGPSQNPT 267
>gi|33862361|ref|NP_893921.1| protease [Prochlorococcus marinus str. MIT 9313]
gi|33640474|emb|CAE20263.1| possible protease [Prochlorococcus marinus str. MIT 9313]
Length = 356
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 76/192 (39%), Gaps = 25/192 (13%)
Query: 59 LGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
L + S D+ F+ S ++DI F + P + N + W
Sbjct: 65 LAKISNAADVYFQRVYDSTNTDISFYYDTTIDLGDPSVTTFGVAVPNNNGGRQWTEIFLN 124
Query: 117 GT--------ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
G ++ HE+GHALGL HP N VY + + + +VMSY +P
Sbjct: 125 GPEIQAKSEDFSNYVFNHELGHALGLEHPHD-NSDGDVYLSTDPQLSATPEETVMSYRVP 183
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI----YKIEVQQKDSPFIQTIYD 224
+ S Y ++D A+++I+G+P+ N+ Y+ + T D
Sbjct: 184 E------SGVYPTDFSINDYNALEQIWGSPQAQSTQNVVYRLYQQSTGRHLFSANLTEVD 237
Query: 225 --SGGD--DLLD 232
+GG+ D L+
Sbjct: 238 ILTGGNSSDYLN 249
>gi|332208036|ref|XP_003253102.1| PREDICTED: macrophage metalloelastase [Nomascus leucogenys]
Length = 470
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 61/193 (31%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF----EETSI--- 75
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 109 WRKHYITYRINNYTPDMNREDV-------DNTIRKAFQVWSNVTPLKFSKIKTGVADILV 161
Query: 76 ------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD + W +GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDDDEFWT-THSEGTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H P + Y+ Y + A DI
Sbjct: 221 GHSLGLGHSSD-----PKAIMFPTYK----------YVDINTFRLSA----------DDI 255
Query: 189 VAVQKIYGAPKGS 201
+Q +YG PK +
Sbjct: 256 RGIQSLYGYPKEN 268
>gi|78188384|ref|YP_378722.1| alkaline phosphatase [Chlorobium chlorochromatii CaD3]
gi|78170583|gb|ABB27679.1| Alkaline phosphatase [Chlorobium chlorochromatii CaD3]
Length = 2182
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 55/143 (38%), Gaps = 8/143 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G++ + G YI L T ++ G N TI + + G +GND +
Sbjct: 2018 ITGGEGNNTV---FADGSAQYIVLGTGDD-TLHGGAGNDTIGSLDGNDYLYGEAGNDTLS 2073
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--RFENAIIVYD--ANEHKQDF 337
G N+ +GND+ DG +G D + Y I + V D + D
Sbjct: 2074 GGDDNDHLSGGTGNDLLDGGAGSDIAMFSGALNDYTITHNAITDTYTVADKVSGRDGVDT 2133
Query: 338 LSDVERLRFADQCIDSVNVKQRS 360
L+++E +FAD D
Sbjct: 2134 LTNMEYCQFADTLYDLEAANPYH 2156
>gi|3183022|sp|P91953|HE_HEMPU RecName: Full=50 kDa hatching enzyme; Short=HE; Short=HEZ; AltName:
Full=Envelysin; AltName: Full=Sea-urchin-hatching
proteinase; Contains: RecName: Full=38 kDa hatching
enzyme; Contains: RecName: Full=32 kDa hatching enzyme
non-specific; Contains: RecName: Full=15 kDa peptide;
Flags: Precursor
gi|1816431|dbj|BAA19171.1| hatching enzyme [Hemicentrotus pulcherrimus]
Length = 591
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 63/181 (34%), Gaps = 42/181 (23%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCT 91
+ LS D+++ + R A W V LTF E S DI+ + +
Sbjct: 184 TYSFGTLSNDLSQ--TAIKNELRRAFQVWDDVSSLTFREVVDSSSVDIRIKFGSYEHGDG 241
Query: 92 PRYDSRYFM----------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+D + + + +FD ++ W G GT L A HE GH+LGL H
Sbjct: 242 ISFDGQGGVLAHAFLPRNGDAHFDDSERWTIGTNSGTNLFQVAAHEFGHSLGLYHSD--- 298
Query: 142 GGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+++M Y+ + + DI + +YG G
Sbjct: 299 ----------------VQSALMYPYYRGYNPNFNLDR--------DDIAGITSLYGRNTG 334
Query: 201 S 201
S
Sbjct: 335 S 335
>gi|308205902|gb|ADO19311.1| hypothetical protein Nfla_9703 [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 334
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI D D+ + + ID + S + G + N T+ + ++++GS GND++
Sbjct: 2 TIISGTITDGNDIIVADAANDLIDALAGNDS-VRGGDGNDTLIGNDGNDTLIGSVGNDIL 60
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-LYKIYRFENAIIVYDANEHKQDFLS 339
G + N+ + ND G +G D A S + + + + D L
Sbjct: 61 NGGAGNDTLLGGTRNDTLTGGAGNDILNGGAGSDRVEESGNVNFTLSNTALIGNGTDSLV 120
Query: 340 DVERLRFADQCIDSVNVKQR 359
+E + ++
Sbjct: 121 GIESVFLTGGVGNNSLNASA 140
>gi|149204680|ref|ZP_01881645.1| probable aggregation factor core protein MAFp3, isoform C
[Roseovarius sp. TM1035]
gi|149141939|gb|EDM29989.1| probable aggregation factor core protein MAFp3, isoform C
[Roseovarius sp. TM1035]
Length = 1330
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 8/149 (5%)
Query: 203 GNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
GN++ + + GDD L + ++ G N + IG
Sbjct: 1113 GNDVMGGGFGDDFMSGGAGNDVVAGGAGDDTLEGGEGNDSMSGSFGNDLIFGNGGADDIG 1172
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI +SV G G+D + G N+ NDV DG +G DT A +
Sbjct: 1173 GGTGRDTIDAGAGNDSVGGGEGDDSISGGDGNDFLAGGGRNDVVDGGAGNDTINAGAGND 1232
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + + D ++D E
Sbjct: 1233 TITGGTGADQFVFSSFFDGEADVVTDFED 1261
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 5/177 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+I GG+D + + +++D S +GG N T+
Sbjct: 1058 GGNDTIAGGDGNDSIEAGGGNDNVSASE---GNDFVDAGAGDDS-VGGGVDNDTLIGGVG 1113
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G G+D + G + N+V +G+D +G G D+ + L I
Sbjct: 1114 NDVMGGGFGDDFMSGGAGNDVVAGGAGDDTLEGGEGNDSMSGSFGNDLI-FGNGGADDIG 1172
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + + + + L + + G D +
Sbjct: 1173 GGTGRDTIDAGAGNDSVGGGEGDDSISGGDGNDFLAGGGRNDVVDGGAGNDTINAGA 1229
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 35/128 (27%), Gaps = 8/128 (6%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRF-ENAIIVY 328
ND +IG N+ GND + G D F A + + +N ++
Sbjct: 1051 NDTLIGGGGNDTIAGGDGNDSIEAGGGNDNVSASEGNDFVDAGAGDDSVGGGVDNDTLIG 1110
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + LE + + G D+ +
Sbjct: 1111 GVGNDVMGGGFGDDFMSGGAGNDVVAGGAGDDTLEGGEGNDSMSGSFGNDLIFGNGGADD 1170
Query: 389 FGLSEGRD 396
G GRD
Sbjct: 1171 IGGGTGRD 1178
>gi|107021849|ref|YP_620176.1| glycosyl transferase, group 1 [Burkholderia cenocepacia AU 1054]
gi|116688798|ref|YP_834421.1| glycosyl transferase, group 1 [Burkholderia cenocepacia HI2424]
gi|105892038|gb|ABF75203.1| glycosyl transferase, group 1 [Burkholderia cenocepacia AU 1054]
gi|116646887|gb|ABK07528.1| glycosyl transferase, group 1 [Burkholderia cenocepacia HI2424]
Length = 740
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 61/176 (34%), Gaps = 27/176 (15%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-----------------AFKA 442
D Y Y DL + H+ G +EGR+P+ F
Sbjct: 23 DLLFYRSWYSDLAS---LSDTRLVMHWRKEGPEEGRHPNLNALLQKELLDPTDLPEDFSP 79
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
Y+A + D+ + H+ G +GR FD Y+ + DL
Sbjct: 80 ETYVALNPDIKASL----PSSYHATHHYLKTGAAQGRPFRFDWQFYVDVHPDL--AHLKS 133
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD-HFSNF 557
+ A +H++ G +GR P L + ++ A ++ + D H+ NF
Sbjct: 134 KQEAIQHWLQQGRHDGRFPSLNDFLASLGITRSVLPAQLTLDEIHRLNPDEHYPNF 189
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 50/147 (34%), Gaps = 28/147 (19%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------------------FDS 401
+L Y + Y DL + + H+ + G EGR F
Sbjct: 23 DLLFYRSWYSDLASLSD---TRLVMHWRKEGPEEGRHPNLNALLQKELLDPTDLPEDFSP 79
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
Y+ D++ S A HY+ G +GR P F Y+ H DL
Sbjct: 80 ETYVALNPDIKASLPSSYH-ATHHYLKTGAAQGR-PFRFDWQFYVDVHPDLA-----HLK 132
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLY 488
Q H+ G +GRF + + +L
Sbjct: 133 SKQEAIQHWLQQGRHDGRFPSLNDFLA 159
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 26/150 (17%)
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA------------ 523
E D Y Y DL ++ + H+ G +EGR+P+
Sbjct: 15 RETAPAELDLLFYRSWYSDLASLSDT---RLVMHWRKEGPEEGRHPNLNALLQKELLDPT 71
Query: 524 -----FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
F Y+A + D+ + P A H+ G +GR F+ Y+ + D
Sbjct: 72 DLPEDFSPETYVALNPDIKASL---PSSYHA-THHYLKTGAAQGRPFRFDWQFYVDVHPD 127
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
L ++ + A QH++ G +GR ++
Sbjct: 128 LAHL--KSKQEAIQHWLQQGRHDGRFPSLN 155
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ S Y A D+ + + + H+ + G ++GR FD Y+ + DL
Sbjct: 75 EDFSPETYVALNPDIKASLPSS-YHATHHYLKTGAAQGRPFRFDWQFYVDVHPDL--AHL 131
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD-HFSNF 473
+ A +H++ G +GR P L + ++ A ++ ++ D H+ NF
Sbjct: 132 KSKQEAIQHWLQQGRHDGRFPSLNDFLASLGITRSVLPAQLTLDEIHRLNPDEHYPNF 189
>gi|311255637|ref|XP_003126306.1| PREDICTED: matrix metalloproteinase-19-like [Sus scrofa]
Length = 540
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 59/188 (31%), Gaps = 45/188 (23%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W + ++ L + + A+ A WS V LTF E +DI
Sbjct: 103 GRWRKKHLTFRILNLPSTLPPY-------VARAALLQAFQYWSNVAPLTFREVKAGWADI 155
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ ++W +G L A HE+
Sbjct: 156 RLSFHGRQSPYCSNNFDGPGRVLAHADIPELGSVHFDEDELWTERSYRGVNLRIIAAHEL 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H Y + + A + D+
Sbjct: 216 GHALGLGHSR--------------------------YTQALMAPVYAGYRPHFKLHPDDV 249
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 250 AGIQALYG 257
>gi|167648121|ref|YP_001685784.1| outer membrane adhesin-like protein [Caulobacter sp. K31]
gi|167350551|gb|ABZ73286.1| outer membrane adhesin like proteiin [Caulobacter sp. K31]
Length = 4687
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 13/177 (7%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S I G + I T + +VG G D + G +A ++ + +G+D+ DG +G D F
Sbjct: 1672 SWITGGGGDDLINGGTGADILVGGDGFDTLSGGAAGDILYGGAGDDILDGGAGADQLFGG 1731
Query: 311 APSYLYKIYRFENAI------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ Y + + D + +E L + ++L
Sbjct: 1732 TGTNDIASYASAGPVRAYLDASFANNGNAGGDVYTGIEGLEGSSSSDRLGGNFGANVLRG 1791
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + L G D YEF +G D +D L + D S A
Sbjct: 1792 GGANDKLWGGAGDDT-------YEFNRGDGLDSVYDGVLVVEQILDTAGTLSSTFTA 1841
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 17/163 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG------GDDLLDLTLIGGVKNYIDLNTES 249
GA + + G + + S I ++ G GD LD + NY D
Sbjct: 2999 GADQFTGGADRDTVTYASATSGVIASLTTGGSAGDALGDTFLDAIEVLVGSNYDD----- 3053
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S+ G N T+ +S+ G G+DV+ G + ++ F SG+D G G DT
Sbjct: 3054 --SLTGTATNDTLQGGDGNDSLHGGDGDDVLEGGAGDDQLFAESGDDRLYGGIGHDTLVG 3111
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
S Y + A + + N QD ++ + + D ID
Sbjct: 3112 GTGSDTYYLNGLSGADDIQNFNSSAQD----IDIIGYLDGDID 3150
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 60/194 (30%), Gaps = 22/194 (11%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+YG N+ IY G+D LN S
Sbjct: 2836 YLYGDQNALAPND------NLLGGANRDLIYGRSGNDT--------------LNGGSGDD 2875
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + ++ ++ ++G +G D++ G + + G+D+ G SG D
Sbjct: 2876 YLEGDDGDDSLIGGDGVDRLLGGNGADILDGGAGADSLVGELGDDILIGGSGADRLSGGD 2935
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
EN ++ D + D V++L D V L A + +
Sbjct: 2936 GRDSLS-GGAENDVLNGDLGDDTLDGGDGVDQLDGGDGNDLLVGGLGDDSLFGGAGADTM 2994
Query: 372 IQVIGQDVFESMKH 385
G D F
Sbjct: 2995 SGGAGADQFTGGAD 3008
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 6/123 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + G GND+++G ++ F +G D G +G D F A + +I
Sbjct: 2964 VDQLDGGDGNDLLVGGLGDDSLFGGAGADTMSGGAGADQFTGGADRDTVTYASATSGVIA 3023
Query: 328 YDANEH------KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
FL +E L ++ L+ + L G DV E
Sbjct: 3024 SLTTGGSAGDALGDTFLDAIEVLVGSNYDDSLTGTATNDTLQGGDGNDSLHGGDGDDVLE 3083
Query: 382 SMK 384
Sbjct: 3084 GGA 3086
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N ++ + V+G +GND V+G+ ++ F G D+ G G D A
Sbjct: 1428 VSGDGNNDLVSGGAGDDVVIGGAGNDTVLGDGGDDRAFGGLGADILAGGRGDDVVIAGAG 1487
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ + R + ++ D + D +
Sbjct: 1488 DDVIRYARGDGQDVLIDDLVNNWDLV 1513
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 40/117 (34%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
D +YD D TL DL + +
Sbjct: 1950 NFLKVSLDGANYVALYDQTMTDRAVETLQLADGQTADLTHLRLAGETASVAADFVIGGAG 2009
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G +G+DV+ G + N+ +GNDV +G +G DT A S + +
Sbjct: 2010 NDTLSGLAGDDVMSGGAGNDSLDGGAGNDVLEGGAGADTLNGGADSQTDGLAVSASD 2066
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 5/138 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+G G + + + D G D + + G IDL T + S
Sbjct: 2041 EGGAGADTLNGGADSQTDGLAVSASDPGSYGDTIRY-VTSGAGVVIDLATRAASGGDAQG 2099
Query: 258 KNMTIAQHT--VIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + + IE+V+GS D + G++ N GNDV DG +G D A
Sbjct: 2100 DIIVLGANGFGSIENVLGSDAYGDQLSGDNRANRLSGLGGNDVLDGRAGDDVVVGGAGDD 2159
Query: 315 LYKIYRFENAIIVYDANE 332
++A+ D +
Sbjct: 2160 TLYGGDGDDALSGEDGID 2177
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 29/73 (39%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D ++G + F G+DV G +G D A +Y +
Sbjct: 2231 DILYGEAGDDKLVGGDGGDQLFGGDGDDVLVGGTGDDLLDGGAGGDIYGFDANSGVDQIV 2290
Query: 329 DANEHKQDFLSDV 341
DA +S V
Sbjct: 2291 DAAGVNHIQISGV 2303
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + VVG +G+D + G ++ G D +G G D A
Sbjct: 2134 LSGLGGNDVLDGRAGDDVVVGGAGDDTLYGGDGDDALSGEDGIDRLEGGLGKDVLGGGAG 2193
Query: 313 SY 314
Sbjct: 2194 GD 2195
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 7/95 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-- 310
I G + + V G ND+V G + ++V +GND G G D F
Sbjct: 1410 IYGLNGDDFGFGGLGNDMVSGDGNNDLVSGGAGDDVVIGGAGNDTVLGDGGDDRAFGGLG 1469
Query: 311 -----APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ ++ A QD L D
Sbjct: 1470 ADILAGGRGDDVVIAGAGDDVIRYARGDGQDVLID 1504
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 9/119 (7%)
Query: 229 DLLDLTLI-----GGVKNYIDLNTESWSSIGGYE---KNMTIAQHTVIESVV-GSSGNDV 279
D +D + I+++ + +S GG + TIA + +++ G+D+
Sbjct: 1038 DTIDTAGKLKVNGSASADIIEVSGRALTSTGGLTIGPGSATIALDVSVAALIDAGDGDDI 1097
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V N +GND G D F +A +V A L
Sbjct: 1098 VRAGDLGNDVLGGAGNDKIVGGKLDDWLFGDDGDDTLFAGDVVSAGVVSQAALQAGGTL 1156
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT-------FFYYAPSYLYKIYRF 321
+ + G G+D + G ++ +G D+ +G +G D A S Y
Sbjct: 1181 DRLYGGKGSDWLKGGEGVDLLVGGAGGDILEGGAGDDQGASGAAAVLGGAGSDQYVFGYG 1240
Query: 322 ENAIIVYD 329
+ +++D
Sbjct: 1241 DGNDVLFD 1248
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 19/141 (13%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG---------NSANNVFFESSGNDVFDGS 301
S I G I + +VG+ G D + G N++ ND+ G
Sbjct: 1381 SYIVGVAGASVILGTNGADWIVGTDGADKIYGLNGDDFGFGGLGNDMVSGDGNNDLVSGG 1440
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFA----DQCIDSVN 355
+G D A + + D L+ + + A D +
Sbjct: 1441 AGDDVVIGGAGND----TVLGDGGDDRAFGGLGADILAGGRGDDVVIAGAGDDVIRYARG 1496
Query: 356 VKQRSILEYTASYEDLIQVIG 376
Q +++ + DL+ G
Sbjct: 1497 DGQDVLIDDLVNNWDLVWQNG 1517
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A + +GND G +G D A + A D L+
Sbjct: 2000 AADFVIGGAGNDTLSGLAGDDVMSGGAGNDSLD----GGAGNDVLEGGAGADTLNGG--- 2052
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
AD D + V Y + + G
Sbjct: 2053 --ADSQTDGLAVSASDPGSYGDTIRYVTSGAG 2082
>gi|296216051|ref|XP_002754398.1| PREDICTED: macrophage metalloelastase [Callithrix jacchus]
Length = 469
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 68/192 (35%), Gaps = 49/192 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W ++I Y T D+ V + A WS V L F +T + +DI
Sbjct: 109 WKKHYITYSIQNYTPDMNRKDVDY-------VIQKAFQVWSHVTPLKFSKTNAGVADIVM 161
Query: 82 ISSNN-----------GYVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHEI 128
++ G V + Y + + +FD+ + W KGT L A+HEI
Sbjct: 162 FFASGAHGDYNAFDGRGGVIAHAFGPGYGIGGDTHFDEDEFWTIN-SKGTNLFLVAVHEI 220
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H N +P Y Y + A D
Sbjct: 221 GHALGLDHSSDPNAIMFPTYK----------------YVDVSTFRLSA----------DD 254
Query: 188 IVAVQKIYGAPK 199
I +Q +YG PK
Sbjct: 255 IRGIQSLYGRPK 266
>gi|149716438|ref|XP_001500102.1| PREDICTED: similar to matrix metalloproteinase [Equus caballus]
Length = 483
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 60/196 (30%), Gaps = 49/196 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ TT D+ + AL WS V L F +DI
Sbjct: 117 WKKNTLTYRISKYTTSMTPADVNK-------AVEMALQAWSSAVPLNFVRVDSGEADIMI 169
Query: 82 ISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD A+ W G G L A HE
Sbjct: 170 SFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN-GFNLFTVAAHEF 228
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H + YP Y N Y F D
Sbjct: 229 GHALGLAHSTDPSALMYPTYKYQNPYG----------------------FHLP----KDD 262
Query: 188 IVAVQKIYGAPKGSLG 203
+ +Q +YG + LG
Sbjct: 263 VKGIQALYGPRRAFLG 278
>gi|47223012|emb|CAG07099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 592
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 65/215 (30%), Gaps = 55/215 (25%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+ R + L Q W I Y +T + + R A W V
Sbjct: 62 SASRSRKRRYALTGQKWQRAHITYSIKNVTPKVGAR-------ETHDAIRRAFDVWQGVT 114
Query: 67 DLTFEETSIHS--------DIKFIS------------SNNGYVCTPRYDSRYFM-EINFD 105
L FE + DI I G++ + + +FD
Sbjct: 115 PLRFEAVPYSALETGRRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 174
Query: 106 KADVWRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
+ W G G L A+HE+GHALGL H P + Y+
Sbjct: 175 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSND-----PTAIMAPFYQ--------- 220
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
Y ++ + D+ +QKIYG P
Sbjct: 221 -YMDTENFKLPH----------DDLQGIQKIYGPP 244
>gi|332208022|ref|XP_003253094.1| PREDICTED: matrix metalloproteinase-20 [Nomascus leucogenys]
Length = 483
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 69/216 (31%), Gaps = 51/216 (23%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L + W + Y+ T ++ + AL W
Sbjct: 97 KPRCGVPDVANYRLFPGEPKWKKNTLTYRISKYTPSMSPVEVDK-------AVEMALQAW 149
Query: 63 SKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKAD 108
S L+F S +DI N + + +D + +FD A+
Sbjct: 150 SSAAPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAE 209
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W G G L A HE GHALGL H + YP Y N Y
Sbjct: 210 KWTMGTN-GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPY-------------- 254
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
F D+ +Q +YG K LG
Sbjct: 255 --------GFHLP----KDDVKGIQALYGPRKPFLG 278
>gi|255958234|ref|NP_001157647.1| matrix metalloproteinase 1 isoform 2 [Tribolium castaneum]
Length = 550
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 69/200 (34%), Gaps = 44/200 (22%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
R + L+ W + YK + + ++ +E+ R A WS+ DLTF
Sbjct: 98 NRAKRYALQGSRWKVKNLNYKISKYPKNLNTKEV------DKEIHR-AFSVWSQYTDLTF 150
Query: 71 E--ETSIHSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+ S H +I+F S +G Y + + +FD ++ W +GT
Sbjct: 151 TPSKGSAHIEIRFESGEHGDGDPFDGPGGTLAHAYFPVFGGDAHFDASEKWTINSYRGTN 210
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
L A HE GH+LGL H +M+ F +
Sbjct: 211 LFQVAAHEFGHSLGLSHSDVREA-------------------LMAPFYR-------GYDP 244
Query: 180 CATPMVSDIVAVQKIYGAPK 199
DI +Q +YG
Sbjct: 245 LFELHEDDIQGIQALYGKKT 264
>gi|307591306|ref|YP_003900105.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306986160|gb|ADN18039.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 1547
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 12/182 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDL-----NTESWSSIGGYEKNMTIAQHT-VIESVVGSS 275
IY + D L + IG Y L N G ++ + + + G
Sbjct: 249 IYGTNKGDTLSVLDIGDSSLYPTLAPYSVNGGVLIGGDGNDRLLGVPLSVNDADKFYGGK 308
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY----RFENAIIVYDAN 331
GND ++G ++ +GND DG G DT Y YK+ F+ I +D
Sbjct: 309 GNDELLGFDGDDTLSGGAGNDTIDGGDGTDTAIYSGNYADYKLTLSKADFKTVTITHDGG 368
Query: 332 E--HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D L++VE +F D+ + + +++ T S D I + E + + ++
Sbjct: 369 TQEDGIDTLTNVEFAQFKDKKVPLKGLDLAFVIDTTGSMLDDIDAVKASTSEIINNIFDG 428
Query: 390 GL 391
Sbjct: 429 SF 430
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 76/225 (33%), Gaps = 23/225 (10%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN----TESWSSIGGYEKNMTIA----QHT 266
T+ S D + N +LN S S+I ++T+A
Sbjct: 1311 PGTTALTLDLSVSSDTTVESDETFFANLTNLNGAIFATSQSTINILNDDLTLAPTFAGTN 1370
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-------KIY 319
+ G +GND++ G ++ + GND +G SG D + + ++
Sbjct: 1371 GNDDFTGGNGNDIINGEGGDDSLNGAGGNDTLNGGSGQDVLTGGDGADTFVYNNFTDSLF 1430
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ I ++ + + L+++ + I + N+ Y + V
Sbjct: 1431 ANPDRIRSFNPTQGDRIDLANIPTATYNAGLIPAANLTSAVNAAYADADPTTPGEQALGV 1490
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+++ F+ FG S + YL D + F ++
Sbjct: 1491 NQAV--FFSFGAS-----SKSRRTYLAVN-DTTSSFNANTDLFIE 1527
>gi|224076199|ref|XP_002193372.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 477
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 65/193 (33%), Gaps = 46/193 (23%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
W + Y+ ++ ++ + R A WS V L F E +D
Sbjct: 85 GGRWYKRHLTYRVVNWPSYLPQHEV-------RLAVRAAFQLWSNVSSLRFGEARGGPAD 137
Query: 79 IKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNALH 126
I+ +N + + F E +FD A+ W GKG L H
Sbjct: 138 IRLTFFHGDHNDGLSNAFDGPGGALAHAFFPRRGEAHFDSAERWSLHSGKGRNLFIVVAH 197
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH LGL H + +MS + + S D +
Sbjct: 198 EVGHTLGLQHSPVKSA-------------------LMSPYYKKLS-KDFVLSW------D 231
Query: 187 DIVAVQKIYGAPK 199
DI+A+Q +YG P
Sbjct: 232 DILAIQNLYGKPS 244
>gi|307194255|gb|EFN76651.1| Matrix metalloproteinase-14 [Harpegnathos saltator]
Length = 547
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 71/203 (34%), Gaps = 49/203 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEV-ARWALGEWSKVVDLTFEETS 74
+ L+ W + Y+ + LN +A + R A WS+ DLTF +
Sbjct: 77 YALQGSRWRTKNLTYQITKYP--------SGLNNDAVDKEIRTAFNVWSEYTDLTFTQKK 128
Query: 75 I-----HSDIKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
H +I+F +G Y Y + +FD ++ W +GT L
Sbjct: 129 GLHNNVHIEIRFEVGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDSERWTIRSYRGTNL 188
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
A HE GH+LGL H +++M+ F D F
Sbjct: 189 FQVAAHEFGHSLGLSHSD-------------------IKSALMAPFYR---GYDPHF--- 223
Query: 181 ATPMVSDIVAVQKIYGAPKGSLG 203
T D+ A+Q +YG G
Sbjct: 224 -TLDRDDVDAIQALYGKKTNHGG 245
>gi|27806541|ref|NP_776537.1| interstitial collagenase precursor [Bos taurus]
gi|116851|sp|P28053|MMP1_BOVIN RecName: Full=Interstitial collagenase; AltName: Full=Fibroblast
collagenase; AltName: Full=Matrix metalloproteinase-1;
Short=MMP-1; Flags: Precursor
gi|260|emb|CAA41210.1| preprocollagenase [Bos taurus]
Length = 469
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 59/196 (30%), Gaps = 53/196 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W N + Y+ + T D+ + A WS V LTF + S +DI
Sbjct: 109 WENTNLTYRIENYTPDLSRADV-------DQAIEKAFQLWSNVTPLTFTKVSEGQADIMI 161
Query: 82 IS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHEI 128
N+ + + F + +FD + W + L A HE
Sbjct: 162 SFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWTSNF-QDYNLYRVAAHEF 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVS 186
GH+LGL H +M SY D +
Sbjct: 221 GHSLGLAHSTDIGA-------------------LMYPSYTFSGDVQLSQ----------D 251
Query: 187 DIVAVQKIYGAPKGSL 202
DI +Q IYG +
Sbjct: 252 DIDGIQAIYGPSQNPT 267
>gi|166365599|ref|YP_001657872.1| hypothetical protein MAE_28580 [Microcystis aeruginosa NIES-843]
gi|166087972|dbj|BAG02680.1| hypothetical protein MAE_28580 [Microcystis aeruginosa NIES-843]
Length = 1059
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 7/184 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G++ Y + S T YD+ G + + I ES+ G +
Sbjct: 505 NGGAGSDSYHADYSYGSSGLTMT-YDTAGSGTITVGTETDTFTSI----ESFDGFKGTDY 559
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I T +E + G GND + GN+ ++ + +GNDV +G G D + + +
Sbjct: 560 NDVIFGGTAVEQLYGREGNDTISGNAGSDYIYGENGNDVLNGGDGYDDLYGGNGNDTLQG 619
Query: 319 YRFENAIIVYDANEHKQD--FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
Y D L+D + + D + + + ++ +D IQ+ G
Sbjct: 620 TDGGTGESDYLVGGSGSDRFILADTTKTFYDDGLTATEGTSDYAEIAGFSTIDDTIQLRG 679
Query: 377 QDVF 380
Sbjct: 680 SSSD 683
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 3/171 (1%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI +G ++ G ++ S S I G + N T++ +++ G +GND
Sbjct: 151 TIIVNGEIIQVEQADFTGTNGNDNITGTSASDNIFGLDGNDTLSGLGGSDNIYGGNGNDS 210
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTF--FYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G ++ F +GND +G SG D + Y + S + + D
Sbjct: 211 LNGGDGSDYFTNDAGNDTINGGSGTDRYEVDYSSASSGLTMTYNTTTGSGTITVGTETDT 270
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +E + + + E+ Y L G D F E
Sbjct: 271 FTSIESFNGFKGTEYNDVIFGGTESEFYYYYGALSGGSGNDTISGNAGFDE 321
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 8/153 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G + Y+ + S T + G + + I ES+ G E
Sbjct: 368 NGGSGIDRYEADYSYASSGLTMTYNTATGSGTITVGTETDTFTSI----ESFEGFKGTEY 423
Query: 259 NMTIAQHTVIE----SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N I T E + G GND + GN+ + + GNDV +G G D + +
Sbjct: 424 NDVIFGGTENEYYEGGLKGGGGNDTISGNAGFDRIYGEDGNDVLNGGVGNDQLYGGNGND 483
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
L ++ + N + + +
Sbjct: 484 LLNGDSGDDYFTGDEGNNDTINGGAGSDSYHAD 516
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 76/251 (30%), Gaps = 15/251 (5%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
GS N D+ + N+ ++ D S+ M + G+
Sbjct: 343 GSGNDSLNGDAGDDYFTNEDGNDTINGGSGIDRYEADYSYASSGLTMTYNTAT-----GS 397
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQT-----IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++G + F T I+ ++ + L GG N +
Sbjct: 398 GTITVGTETDTFTSIESFEGFKGTEYNDVIFGGTENEYYEGGLKGGGGNDTISGNAGFDR 457
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN-DVFDGSSGLDTFF--- 308
I G + N + + + G +GND++ G+S ++ F GN D +G +G D++
Sbjct: 458 IYGEDGNDVLNGGVGNDQLYGGNGNDLLNGDSGDDYFTGDEGNNDTINGGAGSDSYHADY 517
Query: 309 -YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + + I + + + D L
Sbjct: 518 SYGSSGLTMTYDTAGSGTITVGTETDTFTSIESFDGFKGTDYNDVIFGGTAVEQLYGREG 577
Query: 368 YEDLIQVIGQD 378
+ + G D
Sbjct: 578 NDTISGNAGSD 588
>gi|114640115|ref|XP_508724.2| PREDICTED: macrophage metalloelastase [Pan troglodytes]
Length = 470
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 109 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 161
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 221 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 254
Query: 188 IVAVQKIYGAPKGS 201
I +Q +YG PK +
Sbjct: 255 IRGIQSLYGDPKEN 268
>gi|297690058|ref|XP_002822444.1| PREDICTED: matrix metalloproteinase-20-like [Pongo abelii]
Length = 483
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 71/216 (32%), Gaps = 51/216 (23%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L + W + Y+ T S ++ + AL W
Sbjct: 97 KPRCGVPDVANYRLFPGEPKWKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAW 149
Query: 63 SKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKAD 108
S V L+F S +DI N + + +D + +FD A+
Sbjct: 150 SSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAE 209
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W G G L A HE GHALGL H + YP Y N Y
Sbjct: 210 KWTMGTN-GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYG------------- 255
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
F D+ +Q +YG K LG
Sbjct: 256 ---------FHLP----KDDVKGIQALYGPRKAFLG 278
>gi|219518916|gb|AAI43774.1| Matrix metallopeptidase 12 (macrophage elastase) [Homo sapiens]
Length = 470
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 109 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 161
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 221 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 254
Query: 188 IVAVQKIYGAPKGS 201
I +Q +YG PK +
Sbjct: 255 IRGIQSLYGDPKEN 268
>gi|188584221|ref|YP_001927666.1| hypothetical protein Mpop_5035 [Methylobacterium populi BJ001]
gi|179347719|gb|ACB83131.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 137
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD YL Y D+R HYI +G +EGR+P A F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRVF----PQGPLVHYIHYGWREGRDPSAGFSTEGYLRANPDVRES 86
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVESGLSEGR 103
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
I + + Y Y D+ + H+ +G EGRD + F + YL +
Sbjct: 24 SIVRTPLPGFDPIYYLYWYPDVRVF----PQGPLVHYIHYGWREGRDPSAGFSTEGYLRA 79
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGR 435
D+R H++ G+ EGR
Sbjct: 80 NPDVRE----SGCNPLVHFVESGLSEGR 103
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 12/85 (14%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD YL Y D+R HYI +G +EGR+P A F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRVF----PQGPLVHYIHYGWREGRDPSAGFSTEGYLRANPDVRES 86
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRS 564
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVESGLSEGRQ 104
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 519 RNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTS 575
R P F + Y+ + D+ F P + H+ ++G+ EGR + F+ + YL +
Sbjct: 27 RTPLPGFDPIYYLYWYPDV-RVFPQGPLV------HYIHYGWREGRDPSAGFSTEGYLRA 79
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ H++ G+ EGR
Sbjct: 80 NPDVRE----SGCNPLVHFVESGLSEGR 103
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 435 RNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGS 491
R P F + Y+ + D+ F P + H+ ++G EGR F + YL +
Sbjct: 27 RTPLPGFDPIYYLYWYPDV-RVFPQGPLV------HYIHYGWREGRDPSAGFSTEGYLRA 79
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGR 519
D+R H++ G+ EGR
Sbjct: 80 NPDVRESG----CNPLVHFVESGLSEGR 103
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 11/83 (13%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+P YL Y D+ HYI +G +EGR F + L R
Sbjct: 31 PGFDPIYYLYWYPDVRVF----PQGPLVHYIHYGWREGRD---PSAGFSTEGYL----RA 79
Query: 625 KADLSLSFDHKKVDLYTDYFGDG 647
D+ S + V +G
Sbjct: 80 NPDVRESGCNPLVHFVESGLSEG 102
>gi|321462024|gb|EFX73051.1| matrix metalloproteinase 1 [Daphnia pulex]
Length = 1050
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 71/199 (35%), Gaps = 59/199 (29%)
Query: 27 FIRYKPDVLTTHRLSFDITELNPN------AQEVARWALGEWSKVVDLTFEETSIHS--- 77
I K + T L++ I++ P+ +E+A+ A W +V LTF +
Sbjct: 122 NIDIKGNRWTKDELTYGISKYTPDLEKSIVDREIAK-AFQLWEEVTPLTFTFVETGNVDI 180
Query: 78 DIKFISSNN----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+I+F + GY P+ YF D+A+ W GT L
Sbjct: 181 EIRFQYGGHSDSKDDPTFEGPGGILGYAFFPKSGDTYF-----DEAETWTTN-SSGTNLF 234
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H S + S+ Y D ++
Sbjct: 235 QVATHEFGHSLGLEHSESKMA---------------VMYSL--YDYRPDFKLET------ 271
Query: 182 TPMVSDIVAVQKIYGAPKG 200
DI +Q++YGA
Sbjct: 272 ----DDINRIQELYGAKNS 286
>gi|199128|gb|AAA39526.1| metalloelastase [Mus musculus]
Length = 462
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 100 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 152
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 153 MILFAFGAHGDFNYFDGKGGTLAHVFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 211
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 212 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 246
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 247 DIRNIQSLYGAP 258
>gi|123090|sp|P22757|HE_PARLI RecName: Full=Hatching enzyme; Short=HE; Short=HEZ; AltName:
Full=Envelysin; AltName: Full=Sea-urchin-hatching
proteinase; Contains: RecName: Full=Hatching enzyme 18
kDa form; Flags: Precursor
gi|9996|emb|CAA37667.1| pre-pro-hatching enzyme [Paracentrotus lividus]
Length = 587
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 44/190 (23%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIKFIS 83
+ R +P + L+ D+ + + ++ R A W V L+F E + DI+
Sbjct: 173 TWSRNQPVTYSFGALTSDLNQ--NDVKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKF 230
Query: 84 SNNGYVCTPRYDSRYFM----------EINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + +D R + + +FD ++ W G GT L A HE GH+LG
Sbjct: 231 GSYDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETWTEGTRSGTNLFQVAAHEFGHSLG 290
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDIVAV 191
L H S + S + Y GY + DI +
Sbjct: 291 LYH--------------------STVRSALMY--------PYYQGYVPNFRLDNDDIAGI 322
Query: 192 QKIYGAPKGS 201
+ +YG+ GS
Sbjct: 323 RSLYGSNSGS 332
>gi|321470488|gb|EFX81464.1| hypothetical protein DAPPUDRAFT_303491 [Daphnia pulex]
Length = 142
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 41/157 (26%)
Query: 52 QEVARWALGEWSKVVDLTFE---ETSIHSDIKFISSNNGYVCTPRYDSRYFME-----IN 103
+E+A+ A W+ V DLTF E+S DI+ + + Y ++ ++
Sbjct: 8 REIAK-AFQMWADVADLTFVHLNESSTV-DIEILFVSGVYDGPGGVLAKSSYPREGAFVH 65
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FD+++ W + K T L A H+ GH LGL H S T+VM
Sbjct: 66 FDESETWTHNSDKETSLLQVATHQFGHTLGLRHS-------------------SVRTAVM 106
Query: 164 S--YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S Y D +D DI +Q +YG
Sbjct: 107 SPIYDYSPDLKLD----------KDDIEGIQALYGEN 133
>gi|435970|gb|AAA58658.1| metalloproteinase [Homo sapiens]
Length = 470
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 109 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 161
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 221 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 254
Query: 188 IVAVQKIYGAPKGS 201
I +Q +YG PK +
Sbjct: 255 IRGIQSLYGDPKEN 268
>gi|73858572|ref|NP_002417.2| macrophage metalloelastase preproprotein [Homo sapiens]
gi|729179|sp|P39900|MMP12_HUMAN RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Macrophage elastase; Short=ME; Short=hME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|56788330|gb|AAW29944.1| matrix metalloproteinase 12 (macrophage elastase) [Homo sapiens]
gi|85567332|gb|AAI12302.1| Matrix metalloproteinase 12, preproprotein [Homo sapiens]
gi|119587437|gb|EAW67033.1| matrix metallopeptidase 12 (macrophage elastase) [Homo sapiens]
gi|189054155|dbj|BAG36675.1| unnamed protein product [Homo sapiens]
gi|307685507|dbj|BAJ20684.1| matrix metallopeptidase 12 [synthetic construct]
gi|313883062|gb|ADR83017.1| matrix metallopeptidase 12 (macrophage elastase) [synthetic
construct]
Length = 470
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 109 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 161
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 221 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 254
Query: 188 IVAVQKIYGAPKGS 201
I +Q +YG PK +
Sbjct: 255 IRGIQSLYGDPKEN 268
>gi|326914436|ref|XP_003203531.1| PREDICTED: 72 kDa type IV collagenase-like [Meleagris gallopavo]
Length = 267
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 49/206 (23%)
Query: 13 IADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+AD+ W+ ++ YK T + + R AL WS V L F
Sbjct: 95 VADYQTFSGSPRWNKKYLTYKIVNYTPDLPREYVN-------DAIRRALMVWSDVTPLRF 147
Query: 71 EETS-IHSDIKFISS----NNGYVCTPRYDSRYF---------MEINFDKADVWRYGIGK 116
+ + H+DI + +GY R + + +FD + W +
Sbjct: 148 KRVTQGHADIVIKFARRAHGDGYPFDGRSGTLAHAFQPGEGLGGDAHFDDDERWS-KYNQ 206
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
G L A HE GH+LGL H + + SY P+ +
Sbjct: 207 GVNLFLVAAHEFGHSLGLAHSNVRGA---------------LMYPLYSYVNPETFTLPQ- 250
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSL 202
D +QK+YG +
Sbjct: 251 ---------DDRRGIQKLYGRKSANS 267
>gi|326679760|ref|XP_002667151.2| PREDICTED: matrix metalloproteinase-16-like [Danio rerio]
Length = 387
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 60/206 (29%), Gaps = 55/206 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L Q W + I Y T + R A W V L FE
Sbjct: 52 YALTGQKWLHRHITYSIKNFTPKVGA-------EETHNAIRRAFDVWQNVTPLRFEAVPY 104
Query: 76 --------------------HSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 105 SELERSKKDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 164
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H P + Y+ Y ++
Sbjct: 165 PNHDGNDLFLVAVHELGHALGLEHSND-----PTAIMAPFYQ----------YMDTENFR 209
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP 198
+ D+ +QKIYG P
Sbjct: 210 LPH----------DDLQGIQKIYGPP 225
>gi|288961983|ref|YP_003452293.1| hemolysin-type calcium-binding region [Azospirillum sp. B510]
gi|288914263|dbj|BAI75749.1| hemolysin-type calcium-binding region [Azospirillum sp. B510]
Length = 5519
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 55/169 (32%), Gaps = 30/169 (17%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKN----------YIDLNTES 249
N K T+Y G+D L D +L GG N ID +
Sbjct: 2767 NTPKGNDSLDGGDGNDTLYGGAGNDTLIGGLGDDSLDGGADNDLLAGGPGNDTIDGGAGN 2826
Query: 250 -----WSSIGGYEKNMTIAQHTV--------IESVVGSSGNDVVIGNSANNVFFESSGND 296
+S N+ T +E+V GS+ +DV+ G+ N+ G D
Sbjct: 2827 DTVTYANSATAVNANLATGVGTGEGTDVLRNLENVTGSAFDDVITGDGGANILLGGGGKD 2886
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
G G+DT L + AN QD + ++ R
Sbjct: 2887 TITGGGGVDTIHGGDGDDLSIFTVGTDGGT--SANPELQDGDAGIDTFR 2933
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 4/134 (2%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S + N ++ +++ G +GND +IG ++ + ND+ G G DT
Sbjct: 2762 TISFTNTPKGNDSLDGGDGNDTLYGGAGNDTLIGGLGDDSLDGGADNDLLAGGPGNDTID 2821
Query: 309 YYAPSYLYKIYRFENAI----IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
A + A+ D L ++E + + +IL
Sbjct: 2822 GGAGNDTVTYANSATAVNANLATGVGTGEGTDVLRNLENVTGSAFDDVITGDGGANILLG 2881
Query: 365 TASYEDLIQVIGQD 378
+ + G D
Sbjct: 2882 GGGKDTITGGGGVD 2895
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 5/109 (4%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + G + N+ +GND G G D + + AI ++ +
Sbjct: 2632 NDTLTGTAGNDTLSGGAGNDTIFGGGGDDVIYGDG----TGTFVTGLAITPSLSDIDGSE 2687
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++S V + Q + +T L + H
Sbjct: 2688 YISKV-TITGVPTGASLSAGTQNADGSWTLDPAQLAGLALTAKEGDTSH 2735
>gi|239813783|ref|YP_002942693.1| glycosyl transferase family 2 [Variovorax paradoxus S110]
gi|239800360|gb|ACS17427.1| glycosyl transferase family 2 [Variovorax paradoxus S110]
Length = 1476
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
FD YL +Y D+ + A HY+THG EGR P F EY A + D
Sbjct: 443 SPYFDREWYLKTYPDVASA----GTDPAEHYVTHGAAEGRQPGPWFSGTEYAARYGD--- 495
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
A P + H++ G EGR
Sbjct: 496 AAGFNPLI------HYTLVGAREGRRAGL 518
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD YL +Y D+ + G+D A HY+THG EGR P F EY A + D
Sbjct: 443 SPYFDREWYLKTYPDVASA-GTD---PAEHYVTHGAAEGRQPGPWFSGTEYAARYGD--- 495
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSI 565
A P + H++ G EGR
Sbjct: 496 AAGFNPLI------HYTLVGAREGRRA 516
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 15/94 (15%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F Y+ ++ D+ +A D +H+ G EGR F Y Y
Sbjct: 441 RFSPYFDREWYLKTYPDVASAGTDPA-------EHYVTHGAAEGRQPGPWFSGTEYAARY 493
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
D + HY G +EGR +
Sbjct: 494 GD------AAGFNPLIHYTLVGAREGRRAGLLGS 521
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 15/93 (16%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F Y+ ++ D+ +A D + H+ G EGR F+ Y Y
Sbjct: 441 RFSPYFDREWYLKTYPDVASAGTDPAE-------HYVTHGAAEGRQPGPWFSGTEYAARY 493
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
D HY G +EGR G+ G
Sbjct: 494 GDAAGF------NPLIHYTLVGAREGRRAGLLG 520
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 12/77 (15%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D+ + +H+ G +EGR F Y Y D G +
Sbjct: 451 YLKTYPDVASA----GTDPAEHYVTHGAAEGRQPGPWFSGTEYAARYGD---AAGFN--- 500
Query: 422 AARHYITHGVKEGRNPD 438
HY G +EGR
Sbjct: 501 PLIHYTLVGAREGRRAG 517
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG--ISGMQFKSVM 616
S F+ + YL +Y D+ + + A+HY+THG EGR G SG ++ +
Sbjct: 443 SPYFDREWYLKTYPDVASA----GTDPAEHYVTHGAAEGRQPGPWFSGTEYAARY 493
>gi|148227776|ref|NP_001080518.1| matrix metalloproteinase 1 [Xenopus laevis]
gi|32450369|gb|AAH54233.1| Mmp1-prov protein [Xenopus laevis]
Length = 466
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 62/216 (28%), Gaps = 51/216 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W+ + Y+ T ++ + A WS V LTF + +DI+
Sbjct: 108 WNKKDLTYRIQNYTPDMTRDEV-------DRAIQKAFKVWSDVTPLTFTRVNDGVADIEI 160
Query: 82 ISSNNGYVCTPRYDSRY------FMEINFDKADV-------WRYGIGKGTILSHNALHEI 128
+ + +D Y F N + D W G G L A HE
Sbjct: 161 SFAARDHKDFYPFDGPYGTLAHAFAPGNNNGGDAHFDEDEDWTSG-SVGFNLFLVAAHEF 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--S 186
GH+LGL H N +M + + T +
Sbjct: 220 GHSLGLYHSNDPNA-------------------LM--------YPNYHYVNPNTYQLPQD 252
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
D+ +Q +YGA + + I
Sbjct: 253 DLNGIQSLYGARTKPAEPSTPSNPTNCPPNITFDAI 288
>gi|296448690|ref|ZP_06890552.1| Hemolysin-type calcium-binding region [Methylosinus trichosporium
OB3b]
gi|296253797|gb|EFH00962.1| Hemolysin-type calcium-binding region [Methylosinus trichosporium
OB3b]
Length = 496
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 73/191 (38%), Gaps = 9/191 (4%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A G++ + + ++ +GG D+LD +Y D ++ G
Sbjct: 156 ASDTLTGDDAANLLSGGNGNDLLK---GAGGADILDGGAGSDTVDYRDKTAAVAVTLNGA 212
Query: 257 EKN----MTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+A+ T+ IE++ G SG D +IG+ ++N+ +G DV DG +G+DT Y
Sbjct: 213 TNASVKVGGVAEDTIRNIENIYGGSGADTLIGDGSSNLLRGGAGADVLDGGAGVDTADYR 272
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +D + ++E + + ++L A +
Sbjct: 273 DKTASVAVTLNGATNASVKVGGVAEDTIRNIENIYGGSGADTLIGDGSSNLLRGGAGADV 332
Query: 371 LIQVIGQDVFE 381
L G D +
Sbjct: 333 LDGGAGVDTAD 343
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 8/197 (4%)
Query: 188 IVAVQKIYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
I ++ IYG G+ + + G D D
Sbjct: 227 IRNIENIYGGSGADTLIGD---GSSNLLRGGAGADVLDGGAGVDTADYRDKTASVAVTLN 283
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ S G TI IE++ G SG D +IG+ ++N+ +G DV DG +G+D
Sbjct: 284 GATNASVKVGGVAEDTIRN---IENIYGGSGADTLIGDGSSNLLRGGAGADVLDGGAGVD 340
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y + + +D + ++E + V ++L
Sbjct: 341 TADYSDKTSSVAVTLNGATNATVMVGGVVEDTVRNIENVTGGAGADTLVGDSSANLLSGG 400
Query: 366 ASYEDLIQVIGQDVFES 382
+ L G D
Sbjct: 401 GGDDVLTGAGGADRLTG 417
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 15/183 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV------ 267
K + G D LD +Y D + ++ G
Sbjct: 88 KGGRGNDLLIGGAGADTLDGGAGVDTADYGDKTSAVAVTLNGAINATVTVGGVAEDTIRN 147
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+V G + +D + G+ A N+ +GND+ G+ G D A S A+ V
Sbjct: 148 IENVTGGAASDTLTGDDAANLLSGGNGNDLLKGAGGADILDGGAGSDTVDYRDKTAAVAV 207
Query: 328 Y---------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+D + ++E + + ++L A + L G D
Sbjct: 208 TLNGATNASVKVGGVAEDTIRNIENIYGGSGADTLIGDGSSNLLRGGAGADVLDGGAGVD 267
Query: 379 VFE 381
+
Sbjct: 268 TAD 270
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 57/169 (33%), Gaps = 19/169 (11%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESW-SSIGGYEKNMT--IAQHTVIESVVGSSGNDVVIGNS 284
D + G N +DL + SSI G ++ +A+ G GND +IGN
Sbjct: 30 SDRFNAAAATG-NNVVDLRAGTTDSSINGKTVTVSGDLAKG------FGGDGNDTLIGNG 82
Query: 285 ANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
A N+ GND DG +G+DT Y + + +
Sbjct: 83 AGNLLKGGRGNDLLIGGAGADTLDGGAGVDTADYGDKTSAVAVTLNGAINATVTVGGVAE 142
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + ++E + ++L + L G D+ +
Sbjct: 143 DTIRNIENVTGGAASDTLTGDDAANLLSGGNGNDLLKGAGGADILDGGA 191
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 61/181 (33%), Gaps = 23/181 (12%)
Query: 188 IVAVQKIYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
I ++ IYG G+ + + G D D +
Sbjct: 300 IRNIENIYGGSGADTLIGD---GSSNLLRGGAGADVLDGGAGVDTADYSDKTSSVAV--- 353
Query: 246 NTESWSSIGGYEKNMTIAQHTV------IESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
++ G + V IE+V G +G D ++G+S+ N+ G+DV
Sbjct: 354 ------TLNGATNATVMVGGVVEDTVRNIENVTGGAGADTLVGDSSANLLSGGGGDDVLT 407
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G+ G D + S + I+ D + D L ++ FA+ S + +Q
Sbjct: 408 GAGGADRLTGGSGSDTFVFAPAFGQDIITDFSS--TDRLR-IDDTIFANWSALSSHAQQV 464
Query: 360 S 360
Sbjct: 465 G 465
>gi|332703895|ref|ZP_08423983.1| hypothetical protein Desaf_2773 [Desulfovibrio africanus str.
Walvis Bay]
gi|332554044|gb|EGJ51088.1| hypothetical protein Desaf_2773 [Desulfovibrio africanus str.
Walvis Bay]
Length = 736
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 23/206 (11%)
Query: 200 GSLGNN--IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL---------NTE 248
G GNN Y + + D GDD + ++ +L +
Sbjct: 383 GGAGNNWVSYASVRDTFQNKGVVVYLDDEGDDSYGVREYPVYESNGNLLSEPHSEYDDLA 442
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S +++ G + I + + G +G+D +IGN+ ++ GND DG G D
Sbjct: 443 SIANVEGSIFSDAIYGNDHNNHLKGLAGDDSIIGNAGDDTLDGGQGNDTIDGGLGSDVII 502
Query: 309 YYAPSYLYKIYRF------------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + + N D + D S +E + ++ +
Sbjct: 503 GGSGNDWVSYQSYYSCSFQGMSIDLVNGACSLDTSSEDTDQFSGIENVEGSEYGDEICGD 562
Query: 357 KQRSILEYTASYEDLIQVIGQDVFES 382
+ L + + G D
Sbjct: 563 SLGNTLHGMGGSDTISGGAGSDFING 588
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 60/202 (29%), Gaps = 26/202 (12%)
Query: 200 GSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDLNTESWS-- 251
G+ G++ I G+D + IDL + S
Sbjct: 476 GNAGDDTLDGGQGNDTIDGGLGSDVIIGGSGNDWVSYQSYYSCSFQGMSIDLVNGACSLD 535
Query: 252 -------------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
++ G E I ++ ++ G G+D + G + ++ G D
Sbjct: 536 TSSEDTDQFSGIENVEGSEYGDEICGDSLGNTLHGMGGSDTISGGAGSDFINGGEGIDTL 595
Query: 299 DGSSGLDTFFYYAPSYLYKI-----YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G++G DTF++ + + + + ++ D + L D + +
Sbjct: 596 YGNAGADTFYFDNMEDGFSVDTHISFSGQQGDLIKDFTPGQDKILLDSSQYSQLGMVVSY 655
Query: 354 VNVKQRSILEYTASYEDLIQVI 375
Y + +Q
Sbjct: 656 DTNFITIDGLYDGNNATDVQGA 677
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 27/78 (34%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G +N+ GNDV G +G D
Sbjct: 320 GDGGNNSIEGTEYPDFIQGLAGDDSLWGLGSNDTLQGGEGNDVLYGGAGDDVLDGGRGDN 379
Query: 315 LYKIYRFENAIIVYDANE 332
N + +
Sbjct: 380 SIDGGAGNNWVSYASVRD 397
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + ++ +++ G GNDV+ G + ++V G++ DG +G + Y +
Sbjct: 336 IQGLAGDDSLWGLGSNDTLQGGEGNDVLYGGAGDDVLDGGRGDNSIDGGAGNNWVSYASV 395
Query: 313 SYLYKIYRFENAIIVYDANEHKQD 336
F+N +V ++ D
Sbjct: 396 RDT-----FQNKGVVVYLDDEGDD 414
>gi|325958965|ref|YP_004290431.1| family 2 glycosyl transferase [Methanobacterium sp. AL-21]
gi|325330397|gb|ADZ09459.1| glycosyl transferase family 2 [Methanobacterium sp. AL-21]
Length = 770
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL +Y D+RN HYI HG KE R P F Y+ ++ D+ +
Sbjct: 33 FDKEFYLTNYPDIRNT----NINPLDHYIYHGWKEKRVPSTKFDGNYYLKNYSDVRKSEV 88
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ H+ +G +EGRF +
Sbjct: 89 NP-------LIHYVVYGKKEGRFPNHHA 109
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
+ + F Y+ ++ D+ N + DH+ G +E R + FD YL +Y
Sbjct: 29 SLNLFDKEFYLTNYPDIRNTNINP-------LDHYIYHGWKEKRVPSTKFDGNYYLKNYS 81
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPD 522
D+R HY+ +G KEGR P+
Sbjct: 82 DVRK----SEVNPLIHYVVYGKKEGRFPN 106
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 58/148 (39%), Gaps = 18/148 (12%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDL 579
+ F Y+ ++ D+ N + DH+ G++E R S F+ + YL +Y D+
Sbjct: 31 NLFDKEFYLTNYPDIRNTNINP-------LDHYIYHGWKEKRVPSTKFDGNYYLKNYSDV 83
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGISG--MQFKSVMNLSEKSRDKADLSLSFDHKKV 637
HY+ +G KEGR + S + + ++K + + +++
Sbjct: 84 RK----SEVNPLIHYVVYGKKEGR---FPNHHAEINSTEYIIKDLKNKLNETNKKHKQEI 136
Query: 638 DLYTDYFGDGNYYDSDLYSMHDINHDFS 665
+ + + + ++ + F+
Sbjct: 137 EKLNNRINSHSSLTRKIDDLNRLTRKFT 164
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 10/99 (10%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
R ++ Y +Y D+ + H+ G E R + F
Sbjct: 16 NIYRIIKAQKLIKSLNLFDKEFYLTNYPDIR----NTNINPLDHYIYHGWKEKRVPSTKF 71
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
D YL +Y D+R HY+ +G KEGR P+
Sbjct: 72 DGNYYLKNYSDVRK----SEVNPLIHYVVYGKKEGRFPN 106
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL +Y D+R + HYI HG KE R P F Y+ ++ D+ +
Sbjct: 33 FDKEFYLTNYPDIR----NTNINPLDHYIYHGWKEKRVPSTKFDGNYYLKNYSDVRKSEV 88
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
+ H+ +G +EGR
Sbjct: 89 NP-------LIHYVVYGKKEGRFPN 106
>gi|9506899|ref|NP_062344.1| stromelysin-2 precursor [Mus musculus]
gi|13124340|sp|O55123|MMP10_MOUSE RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
metalloproteinase-10; Short=MMP-10; AltName:
Full=Transin-2; Flags: Precursor
gi|2791312|emb|CAA73641.1| stromelysin 2 [Mus musculus]
gi|12860835|dbj|BAB32058.1| unnamed protein product [Mus musculus]
gi|120538365|gb|AAI30028.1| Matrix metallopeptidase 10 [Mus musculus]
gi|148692989|gb|EDL24936.1| mCG9885 [Mus musculus]
Length = 476
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 63/189 (33%), Gaps = 46/189 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI-- 79
W I Y+ T + AL W +V LTF S +DI
Sbjct: 109 WRKSHITYRIVNYTPDLPRQSV-------DSAIEKALKVWEEVTPLTFSRISEGEADIMI 161
Query: 80 KFISSNNGYVC---------TPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F +G Y ++ +++FD + W GT L A HE+
Sbjct: 162 SFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDDEKWTLAP-SGTNLFLVAAHEL 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H S+M Y + + S A+F DI
Sbjct: 221 GHSLGLFHSDKKE-------------------SLM-YPVYRFSTSPANFHLSQ----DDI 256
Query: 189 VAVQKIYGA 197
+Q +YGA
Sbjct: 257 EGIQSLYGA 265
>gi|291569921|dbj|BAI92193.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1474
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 16/144 (11%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ G+D L D + GG N L G + +I + +++ G G
Sbjct: 59 LFGGPGNDTLFGELGDDVIYGGEGNNFIL---------GNSGDDSIVGGSGNDTIYGGQG 109
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH--K 334
+D +IG +++ F GND+ SG ++ A S L+ I N +
Sbjct: 110 SDTLIGGEGDDLLFGDRGNDILYTGSGFNSLTGGAGSDLFVIGVGFNGGQTDVITDFRPG 169
Query: 335 QDFLSDVERLRFADQCIDSVNVKQ 358
D + L FAD I
Sbjct: 170 FDLIGLANGLEFADLEIAQQGNDT 193
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
GDD L + TL G N + + + G N T+ + + G GN+ ++
Sbjct: 28 GDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGNDTLFGELGDDVIYGGEGNNFIL 87
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GNS ++ SGND G G DT L R + +
Sbjct: 88 GNSGDDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRGNDILYTGSGFNSLT 141
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 12/156 (7%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
IG ++ + L T I G E + T+ +++ GN+++ G ++ F GN
Sbjct: 6 IGTSESDLLLGTSEDDEIQGLEGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGN 65
Query: 296 DVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRF 346
D G G D + S I +Y D L E L F
Sbjct: 66 DTLFGELGDDVIYGGEGNNFILGNSGDDSIVGGSGNDTIYGG--QGSDTLIGGEGDDLLF 123
Query: 347 ADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFE 381
D+ D + + L A + + +G + +
Sbjct: 124 GDRGNDILYTGSGFNSLTGGAGSDLFVIGVGFNGGQ 159
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 16/132 (12%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+S +D+++G S ++ G+D G G DT F + L F Y
Sbjct: 5 IIGTSESDLLLGTSEDDEIQGLEGDDTLLGFQGNDTLFAGEGNNLL----FGGQGDDYLF 60
Query: 331 NEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D L + + + + + + + + G D
Sbjct: 61 GGPGNDTLFGELGDDVIYGGEGNNFILGNSGDDSIVGGSGNDTIYGGQGSDTLIG----- 115
Query: 388 EFGLSEGRDITF 399
EG D+ F
Sbjct: 116 ----GEGDDLLF 123
>gi|291221485|ref|XP_002730753.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 397
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 70/208 (33%), Gaps = 50/208 (24%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+ ER+ + L W + ++ T+ + ++ + WS V
Sbjct: 18 FMPERLRRYALGGYKWGKTDLTFRFLSYTSDMT-------DSEQRDAIYRSFKHWSDVTP 70
Query: 68 LTFEETSIH-SDIKFISSNNGYVCTPRYD---------SRYFM---EINFDKADVWRYGI 114
LTF E S +DI + + P YF +++FD + +
Sbjct: 71 LTFTEVSNGEADILIEFATGVHSDGPGAAFDGPGGTLAHAYFPEDGDMHFDDDEYFTVNS 130
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A HE+GH+LGL H G N +M F
Sbjct: 131 DHGINLDFTATHELGHSLGLSHSGDQNA-------------------IMYPFY------- 164
Query: 175 ASFGYCATPMV--SDIVAVQKIYGAPKG 200
GY + DI+ +Q +YG+ +
Sbjct: 165 --LGYVPDLQLKQDDIIGIQTLYGSNEA 190
>gi|45359865|ref|NP_004762.2| matrix metalloproteinase-20 preproprotein [Homo sapiens]
gi|322510116|sp|O60882|MMP20_HUMAN RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|157170228|gb|AAI52742.1| Matrix metallopeptidase 20 [synthetic construct]
gi|261857992|dbj|BAI45518.1| matrix metallopeptidase 20 [synthetic construct]
Length = 483
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 71/216 (32%), Gaps = 51/216 (23%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L + W + Y+ T S ++ + AL W
Sbjct: 97 KPRCGVPDVANYRLFPGEPKWKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAW 149
Query: 63 SKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKAD 108
S V L+F S +DI N + + +D + +FD A+
Sbjct: 150 SSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAE 209
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W G G L A HE GHALGL H + YP Y N Y
Sbjct: 210 KWTMGTN-GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYG------------- 255
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
F D+ +Q +YG K LG
Sbjct: 256 ---------FHLP----KDDVKGIQALYGPRKVFLG 278
>gi|6678900|ref|NP_032635.1| matrix metalloproteinase-15 precursor [Mus musculus]
gi|12585269|sp|O54732|MMP15_MOUSE RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
Full=Membrane-type matrix metalloproteinase 2;
Short=MT-MMP 2; Short=MTMMP2; AltName:
Full=Membrane-type-2 matrix metalloproteinase;
Short=MT2-MMP; Short=MT2MMP; Flags: Precursor
gi|2662366|dbj|BAA23667.1| membrane type-2 matrix metalloproteinase [Mus musculus]
gi|34784408|gb|AAH57952.1| Matrix metallopeptidase 15 [Mus musculus]
gi|55777344|gb|AAH47278.1| Matrix metallopeptidase 15 [Mus musculus]
Length = 657
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 68/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+NY + + T ++ E R A W +V L F+E S
Sbjct: 128 YTLTGKAWNNYHLTFSIQNYTEKLGWYNS-------MEAVRRAFQVWEQVTPLVFQEVSY 180
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 181 DDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADEPWTFS 240
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + +M+ F
Sbjct: 241 STDLHGISLFLVAVHELGHALGLEHSSNPSA-------------------IMAPFYQWMD 281
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D+ +Q++YG+P G
Sbjct: 282 TDNFQ------LPEDDLRGIQQLYGSPDG 304
>gi|198430583|ref|XP_002121453.1| PREDICTED: similar to matrix metalloproteinase 14
(membrane-inserted) alpha [Ciona intestinalis]
Length = 685
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 64/205 (31%), Gaps = 51/205 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF--EET 73
++ W I Y + T E A W V L F +
Sbjct: 172 YVTVGSPWQKNLITYSINNFTPKLG-------QKLTHEAIDDAFRVWGSFVPLQFKKVDA 224
Query: 74 SIHSDIK------FISSNNGYVCTPRYDSRYFM-------EINFDKADVWRY--GIGKGT 118
S + DI F + N + Y + F + +FD A+ W G +G
Sbjct: 225 SQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSGIGGDTHFDGAEPWTLHQGPNRGN 284
Query: 119 ILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L A+HE+GHALGL H PVY Y ++ +
Sbjct: 285 DLFLVAVHELGHALGLQHSPDVKAIMAPVYK----------------YHDTENFQLPQ-- 326
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSL 202
DI+ +Q +YGA
Sbjct: 327 --------DDILGIQSLYGARYSGT 343
>gi|321455269|gb|EFX66406.1| matrix metalloproteinase 1 [Daphnia pulex]
Length = 538
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 66/185 (35%), Gaps = 36/185 (19%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W+ + Y T+ S + E+AR A W LTF + + +DI
Sbjct: 120 NRWTKKHLTYDIKTYTSQLSS------SEVDHEIAR-AFKLWENASVLTFTQVTTGQADI 172
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
S + +++ + + I T L H A+HEIGH+LGL H
Sbjct: 173 VIRRSTVVLTAKATWAFTFWLTRSHLFMEARL--IFTSTNLLHVAVHEIGHSLGLFHS-- 228
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+ +SVM YF D S+ DI A+Q +YG +
Sbjct: 229 -----------------TVPSSVM-YF------TDKSYDPHFKLSEDDISAIQHLYGKNE 264
Query: 200 GSLGN 204
S G
Sbjct: 265 RSNGG 269
>gi|126343245|ref|XP_001378076.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 528
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 58/192 (30%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W + ++ + A+ A WS+V +L+F E +DI
Sbjct: 104 GRWRKRHLTFRILNWPSTLPVHT-------ARTALLTAFRYWSRVANLSFREVQAGWADI 156
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+++ W G L A HE+
Sbjct: 157 RLSFHGKYSAYCSKGFDGPGNVLAHADIPELGSVHFDESETWTEATKMGVNLRIIAAHEL 216
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H PVY Y F D
Sbjct: 217 GHALGLGHSRYPQALMAPVYSGFRPYFQLHF---------------------------DD 249
Query: 188 IVAVQKIYGAPK 199
+ +Q +YG
Sbjct: 250 VAGIQALYGKRT 261
>gi|26354562|dbj|BAC40909.1| unnamed protein product [Mus musculus]
gi|74215233|dbj|BAE41839.1| unnamed protein product [Mus musculus]
Length = 403
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 41 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 93
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 94 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 152
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 153 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 187
Query: 187 DIVAVQKIYGAP 198
DI +Q +YGAP
Sbjct: 188 DIRNIQSLYGAP 199
>gi|332019904|gb|EGI60365.1| Matrix metalloproteinase-14 [Acromyrmex echinatior]
Length = 513
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 68/199 (34%), Gaps = 50/199 (25%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA--QEVARWALGEWSKVVDLTFEET 73
+ L+ W + YK T LN +E+A A W+ DLTF
Sbjct: 117 YALQGSRWRTKNLTYKISKYP--------TGLNKQEVEKEIAN-AFSVWTGETDLTFTRK 167
Query: 74 SIHSD----IKFISSNNG---------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+ H + I+F +G Y Y + +FD ++ W +GT L
Sbjct: 168 TGHENVHIEIRFEVGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDSERWTIRSYRGTNL 227
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
A HE GH+LGL H + +M+ F D F
Sbjct: 228 FQVAAHEFGHSLGLSHSDVKSA-------------------LMAPFYR---GYDPHF--- 262
Query: 181 ATPMVSDIVAVQKIYGAPK 199
T D+ A+Q +YG
Sbjct: 263 -TLDQDDVSAIQALYGTKT 280
>gi|294676791|ref|YP_003577406.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294475611|gb|ADE84999.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 767
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 8/147 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYE 257
G Y TI+ G+DL+D +++G N L +I G
Sbjct: 224 GTTGYVWNDTLFGDAGNDTIWAGSGNDLVDGGADNDSILGEDGNDTLLGGTGADTIQGCA 283
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++ ++ ++G +G D + G ++ +SGND+ G + D ++ +
Sbjct: 284 GDDSLDGGAGVDLLLGGTGQDTIHGGDGADLLAGNSGNDLIYGEADADRIYFESDWGNDT 343
Query: 318 IY---RFENAIIVYDANEHKQDFLSDV 341
++ + +D + D L V
Sbjct: 344 VFGGGTTTAGGVDHDVLDFSHDTLGGV 370
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 86/302 (28%), Gaps = 40/302 (13%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S + F W Y + T + + + + ++
Sbjct: 18 GGGSTLWPGAQFKVDPAWDYSTSRRTFVFTD--------------DDTSLSGDSNFMADE 63
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGY--CATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
Y NDS SV + + +++ + Y ++ V +Y +G I
Sbjct: 64 YGNDSTQ-SV-AVYDAGGTLLYSGRVYVEWSSTFTDPSGTVVHMY---TLEIGGTIIGEV 118
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+P + T + SG +D + + Y L + S+ + TI +S
Sbjct: 119 ATNPLTPGV-TYHVSGVNDGMYGADVSTGPLYSTLASMSF----DPDHVNTIQGGAYNDS 173
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------------LY 316
+ +GND + + +GND +G D
Sbjct: 174 IAAGAGNDTIATEGGADTIDGGAGNDSITFGTGGDCVHGGLGDDYIDDYVGTTGYVWNDT 233
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
N I + D +D + + D + ++ A + L G
Sbjct: 234 LFGDAGNDTIWAGSGNDLVDGGADNDSILGEDGNDTLLGGTGADTIQGCAGDDSLDGGAG 293
Query: 377 QD 378
D
Sbjct: 294 VD 295
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN-----MTIAQHTVIESVVGSSGN 277
+D+ G L+ T N+ S+ +I G + + A + G+ G+
Sbjct: 364 HDTLGGVLVTFTGSEDGTATQGANSVSFDNIEGITGSNLADTVNAAGDASGLRIDGAGGD 423
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
D +IG S +V SG D G +G DT + I F+
Sbjct: 424 DRLIGGSGADVLLGGSGQDTLSGGAGADTIVMADGTGHDFITDFD 468
>gi|3005946|emb|CAA73317.1| enamelysin [Homo sapiens]
Length = 483
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 70/216 (32%), Gaps = 51/216 (23%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L + W + Y+ T S ++ + AL W
Sbjct: 97 KPRCGVPDVANYRLFPGEPKWKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAW 149
Query: 63 SKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKAD 108
S V L+F S +DI N + + +D + +FD +
Sbjct: 150 SSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNPE 209
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W G G L A HE GHALGL H + YP Y N Y
Sbjct: 210 KWTMGTN-GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYG------------- 255
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
F D+ +Q +YG K LG
Sbjct: 256 ---------FHLP----KDDVKGIQALYGPRKVFLG 278
>gi|325203678|gb|ADY99131.1| Iron-regulated protein frpC [Neisseria meningitidis M01-240355]
Length = 1102
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/281 (17%), Positives = 84/281 (29%), Gaps = 59/281 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-----------TILSHN 123
+D + N Y+ Y F + V+ Y G T
Sbjct: 754 DGNDTLIGGAGNDYLEGSSGSDTYVFGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLT 813
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCAT 182
E H L ++ S +V SYF S +
Sbjct: 814 FTREGNHLL------------------IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 855
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+K+ + + G++ Y+ +Y + GDDLL+
Sbjct: 856 GKVLDVATVKKL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN------- 906
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
G N +I +++ G GND + G + N+V GND +
Sbjct: 907 ---------------GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLN 951
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G DT A + + + + QD + +
Sbjct: 952 GEDGNDTLIGGAGNDYLEGGSGSDTYVF--GKGFGQDTVYN 990
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 63/217 (29%), Gaps = 53/217 (24%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y
Sbjct: 886 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGY---------- 935
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFY 387
+ D L+ E L + LI G D E Y
Sbjct: 936 ---NGNDVLNGGE---------------GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTY 977
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG----------------- 430
FG G+D ++ ++ D + G AA H+I G
Sbjct: 978 VFGKGFGQDTVYN--YHVDKNSDTMHFKGF--KAADVHFIRSGSDLVLSASEQDNVRISG 1033
Query: 431 --VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
E D F + S+ D +LVQ
Sbjct: 1034 FFYGENHRVDTFVFDDAAISNPDFAKYINAGNNLVQS 1070
>gi|222148479|ref|YP_002549436.1| hypothetical protein Avi_2007 [Agrobacterium vitis S4]
gi|221735467|gb|ACM36430.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 513
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 57/173 (32%), Gaps = 37/173 (21%)
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASH 449
E I FD YL +Y D+ + G D HY+ +G KEGR+P F + +H
Sbjct: 36 QKESTLIFFDRDFYLNTYIDV-HASGID---PIYHYVANGWKEGRSPFQYFNVQAFSKAH 91
Query: 450 EDLINAFADAPDL------VQVGKDHFSNFGCE------------EGRFVT--------- 482
L D + H FG E R +
Sbjct: 92 PRLEALNVDLAQACIRLYGSYAWQSHIECFGIATDLCLPVSFTSTERRRLRKKWTRYRDF 151
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHE 534
FD+ YL Y D A HY+ G E R P A F Y ++
Sbjct: 152 FDAEFYLKEYPD----TAMTPAGAFMHYMHWGFSEDRQPRADFDGYYYRKANG 200
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 59/177 (33%), Gaps = 40/177 (22%)
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP------DAFKAL 527
+E + FD YL +Y D+ G D HY+ +G KEGR+P AF
Sbjct: 35 KQKESTLIFFDRDFYLNTYIDVH-ASGID---PIYHYVANGWKEGRSPFQYFNVQAFSKA 90
Query: 528 EYI--ASHEDLINAFADAPDLVQAGKDHFSNFGYE------------EGRSIT------- 566
A + DL A A + H FG E R +
Sbjct: 91 HPRLEALNVDLAQACI-RLYGSYAWQSHIECFGIATDLCLPVSFTSTERRRLRKKWTRYR 149
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL--GISGMQFKSVMNLS 619
F+ + YL Y D + A HY+ G E R G ++ LS
Sbjct: 150 DFFDAEFYLKEYPD----TAMTPAGAFMHYMHWGFSEDRQPRADFDGYYYRKANGLS 202
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 50/184 (27%), Gaps = 50/184 (27%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y +Y D+ + + H+ G EGR F+ + ++ L +
Sbjct: 48 FYLNTYIDVHA----SGIDPIYHYVANGWKEGRSPFQYFNVQAFSKAHPRLEALNVDLAQ 103
Query: 421 AAARHYITHGVKEG-----------------------------RNPDAFKALEYIASHED 451
A R Y ++ + R D F A Y+ + D
Sbjct: 104 ACIRLYGSYAWQSHIECFGIATDLCLPVSFTSTERRRLRKKWTRYRDFFDAEFYLKEYPD 163
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARH 509
H+ ++G E R FD Y Y + R +H
Sbjct: 164 -------TAMTPAGAFMHYMHWGFSEDRQPRADFDGYYYRKANGLSRGQ------NPFQH 210
Query: 510 YITH 513
I
Sbjct: 211 CIES 214
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 51/170 (30%), Gaps = 47/170 (27%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y+ ++ D+ + D H+ G +EGR F+ + ++ L
Sbjct: 44 FDRDFYLNTYIDVHASGIDP-------IYHYVANGWKEGRSPFQYFNVQAFSKAHPRLEA 96
Query: 498 VFGSDRGAAARHYITHGVK---------------------EGRNP--------DAFKALE 528
+ A R Y ++ + E R D F A
Sbjct: 97 LNVDLAQACIRLYGSYAWQSHIECFGIATDLCLPVSFTSTERRRLRKKWTRYRDFFDAEF 156
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
Y+ + D A H+ ++G+ E R F+ Y +
Sbjct: 157 YLKEYPDTAMTPA-------GAFMHYMHWGFSEDRQPRADFDGYYYRKAN 199
>gi|197103950|ref|YP_002129327.1| glycosyl transferase, group 1 family protein [Phenylobacterium
zucineum HLK1]
gi|196477370|gb|ACG76898.1| glycosyl transferase, group 1 family protein [Phenylobacterium
zucineum HLK1]
Length = 534
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 62/188 (32%), Gaps = 23/188 (12%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ YL +Y D+ R H++ G KEGR+P+ F EY+ + ++
Sbjct: 31 FDAAWYLQAYPDIAKA----RVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPEVARTGV 86
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYL-Y-----LGSYDDLRNVFGSDRGAAARHYI 511
+ HF G E R D Y L +D A
Sbjct: 87 NP-------FVHFLKSGGEGSRAPRPDLGFRYDVIARLVPVEDRLAQAARASDAVRPGAG 139
Query: 512 THGV--KEGRNP--DAFKALEYIASHEDLINAF-ADAPDLVQAGKDHFSNFGYEEGRSIT 566
G + GR P F +Y A+ + A +A + G+DH +
Sbjct: 140 LAGALGQIGRRPLHVTFSHDDYTANVGGVQLALQREAAGVAAQGRDHLHLHPATPWPMLR 199
Query: 567 FNPDLYLT 574
+ L
Sbjct: 200 TDEPAALG 207
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 15/110 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D+ + + + HF FG EGRD F YL Y ++
Sbjct: 36 YLQAYPDIAKA----RVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPEVART----GVN 87
Query: 422 AARHYITHGVKEGRNPDA-----FKALEYIASHEDLINAFADAPDLVQVG 466
H++ G + R P + + + ED + A A D V+ G
Sbjct: 88 PFVHFLKSGGEGSRAPRPDLGFRYDVIARLVPVEDRLAQAARASDAVRPG 137
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD+ YL +Y D+ R H++ G KEGR+P+ F EY+ + ++
Sbjct: 28 AAEFDAAWYLQAYPDIAKA----RVDPLAHFMAFGWKEGRDPNPRFSVREYLNEYPEVAR 83
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ HF G E R+ +
Sbjct: 84 TGVNP-------FVHFLKSGGEGSRAPRPD 106
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
+ F+ YL +Y D+ R H++ G KEGR +F L+E
Sbjct: 28 AAEFDAAWYLQAYPDIAKA----RVDPLAHFMAFGWKEGRD---PNPRFSVREYLNE 77
>gi|291567578|dbj|BAI89850.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 1598
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 200 GSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
G GN+ + + P +I G+D L D TL G N L S +
Sbjct: 286 GRDGNDTLIGDQFDQTLDGGPGNDSILGGSGNDTLLGGPGDDTLFGQGGNDR-LQAGSGN 344
Query: 252 SI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G N T+ +S+ G G+D++ S +N+ +GND G G ++ F
Sbjct: 345 NLLYGGVGNDTLLGGVGNDSLFGGLGDDLLQAGSGDNILDGGAGNDTLLGGIGNNSLFGG 404
Query: 311 APSYLYKIYRFENAI 325
+ N +
Sbjct: 405 EGNDCLSGGGGNNWL 419
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 15/150 (10%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+Y G+D +L G N + ++ G + + + + + + G +GND +
Sbjct: 691 LYGGAGND----SLFGDSGNDTLVGGSGADTLSGGDGDDVVYGGSGPDLLYGGAGNDCLF 746
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + ++ SG D G G D + + L + E D L
Sbjct: 747 GETGDDTLVGGSGADTLKGGGGNDLLYGGSGPDLL----YGGQGDDSLFGEAGDDTL--- 799
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDL 371
F D D++ + Y DL
Sbjct: 800 ----FGDSGNDTLVGGSGEDVLYGGLGNDL 825
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 58/197 (29%), Gaps = 16/197 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
N I + Y + + D +ID+ + I G + +
Sbjct: 630 DNTIVRFTPTLPGGTQASFTYTASDGNTQD-----SANVFIDILP--VTRINGLGGDDVL 682
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G +GND + G+S N+ SG D G G D + + L +
Sbjct: 683 VGSSAPDLLYGGAGNDSLFGDSGNDTLVGGSGADTLSGGDGDDVVYGGSGPDLL----YG 738
Query: 323 NAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
A E D L S + L+ +L + L G D
Sbjct: 739 GAGNDCLFGETGDDTLVGGSGADTLKGGGGNDLLYGGSGPDLLYGGQGDDSLFGEAGDDT 798
Query: 380 --FESMKHFYEFGLSEG 394
+S G E
Sbjct: 799 LFGDSGNDTLVGGSGED 815
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 22/169 (13%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q Y A LGN + + TI + GDD + G I L
Sbjct: 1367 QFTYTAQDS-LGNT--ASALVSVSIATVDTIDGNAGDD-----FLAGHLGPIVL------ 1412
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IGG + + + ++G+ GND ++G +N G+DV G G DT +
Sbjct: 1413 -IGGPGNDTLLGSAFGNDLLLGNEGNDSLVGGPGDNTLIGGLGDDVLIGGPGNDTLVGGS 1471
Query: 312 PSYLYK-------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
++ A++ DF+ + L+F D+ I +
Sbjct: 1472 GGNTLTGLGGNNVFLYSSTNDVLLSASDLITDFVPGRDTLQFNDEFILA 1520
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 11/174 (6%)
Query: 226 GGDDLLDLTL------IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
GG D TL I+ + + G + N T+ +++ G GND
Sbjct: 253 GGFGSFDYTLRDRHNQFATATATINFRPVTA--MQGRDGNDTLIGDQFDQTLDGGPGNDS 310
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G S N+ G+D G G D + + L + ++ N+ L
Sbjct: 311 ILGGSGNDTLLGGPGDDTLFGQGGNDRLQAGSGNNLLYGGVGNDTLLGGVGNDSLFGGLG 370
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGL 391
D + L+ L L G D ++ E G
Sbjct: 371 D-DLLQAGSGDNILDGGAGNDTLLGGIGNNSLFGGEGNDCLSGGGGNNWLEGGA 423
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 73/206 (35%), Gaps = 38/206 (18%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGG 255
G++ T+ GG+DLL DL L GG + ++ G
Sbjct: 749 TGDDT------LVGGSGADTLKGGGGNDLLYGGSGPDL-LYGGQGDDSLFGEAGDDTLFG 801
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANN------------------VFFESSGNDV 297
N T+ + + + G GND++ G S N+ F +GND
Sbjct: 802 DSGNDTLVGGSGEDVLYGGLGNDLLYGGSGNDIIYGGQGDDFLLGDDGDDTLFGGAGNDT 861
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF--ADQCIDSVN 355
G +G D F Y + S + ++ D L D E+ F ++
Sbjct: 862 LFGGAGNDVFAYISRSQITT-----GTDLIVDFEAGSDRILFDREQFGFIQIGTTPENSL 916
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFE 381
Q+ IL T +Y+D + +I +
Sbjct: 917 SPQQFILVETGTYQDNLSLINSPILA 942
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + ++++GS GND + GN N+ +G+D G G DTF Y +P+
Sbjct: 1106 TAIDGNLGDDTLIGSDGNDSLFGNLGNDCLIGGAGDDTLVGGEGSDTFAYLSPN-----Q 1160
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFA 347
++ D L D ++ RF
Sbjct: 1161 INLGVDLIVDFTPGSDRLLFDRDQFRFT 1188
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 11/132 (8%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS-GLDTF 307
S + +++IA I+ G++G+D + G+ V GND GS+ G D
Sbjct: 1375 SLGNTASALVSVSIATVDTID---GNAGDDFLAGHLGPIVLIGGPGNDTLLGSAFGNDLL 1431
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEY 364
+ +N +I D L + L + ++ Y
Sbjct: 1432 LGNEGNDSLVGGPGDNTLI----GGLGDDVLIGGPGNDTLVGGSGGNTLTGLGGNNVFLY 1487
Query: 365 TASYEDLIQVIG 376
+++ + L+
Sbjct: 1488 SSTNDVLLSASD 1499
Score = 40.5 bits (93), Expect = 0.90, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
I G + T+ +S+ G+ GND +IG + ++ G+D F
Sbjct: 1108 IDGNLGDDTLIGSDGNDSLFGNLGNDCLIGGAGDDTLVGGEGSDTF 1153
>gi|50234983|gb|AAT70722.1| matrix metalloproteinase 20 (enamelysin) [Homo sapiens]
gi|119587428|gb|EAW67024.1| matrix metallopeptidase 20 (enamelysin) [Homo sapiens]
Length = 483
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 71/216 (32%), Gaps = 51/216 (23%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L + W + Y+ T S ++ + AL W
Sbjct: 97 KPRCGVPDVANYRLFPGEPKWKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAW 149
Query: 63 SKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKAD 108
S V L+F S +DI N + + +D + +FD A+
Sbjct: 150 SSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAE 209
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W G G L A HE GHALGL H + YP Y N Y
Sbjct: 210 KWTMGTN-GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYG------------- 255
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
F D+ +Q +YG K LG
Sbjct: 256 ---------FHLP----KDDVKGIQALYGPRKVFLG 278
>gi|62955747|ref|NP_001017890.1| matrix metallopeptidase 23bb [Danio rerio]
gi|62203239|gb|AAH92954.1| Matrix metallopeptidase 23a, like [Danio rerio]
gi|182890478|gb|AAI64476.1| Mmp23al protein [Danio rerio]
Length = 377
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 64/208 (30%), Gaps = 69/208 (33%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---TSIH 76
W ++ + YK D ++ A +WS V LTF E TS
Sbjct: 65 GYRWEHFNVSYKITKFPNTLNKDDT-------RKAISIAFTKWSDVSPLTFTEITNTSKS 117
Query: 77 SDIKFISSNNGYV------CTPRYDSRYF----------MEINFDKADVWRYGIGK---- 116
+DI + P +D EI+FD + W G +
Sbjct: 118 ADITIGFYTYNHTDCWRSPLHPCFDGLNGELAHAFLPPRGEIHFDNHEFWILGKSRFSWK 177
Query: 117 ----GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM----SYFMP 168
L A HEIGHALGL H N +M +Y
Sbjct: 178 QGVWLNDLVQVAAHEIGHALGLWHSQDPNA-------------------LMHPNATYTGQ 218
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYG 196
++ D DI +Q++YG
Sbjct: 219 RNIAQD------------DIWGIQRLYG 234
>gi|302564017|ref|NP_001181006.1| matrix metalloproteinase-25 [Macaca mulatta]
Length = 483
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 67/190 (35%), Gaps = 42/190 (22%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNG 87
++K ++LT + + + ++ + AL WS V L+F S +DI N
Sbjct: 116 KWKKNILTYRVSKYTTSMSSAEVEKAVQMALQAWSSAVPLSFVRINSGEADIMISFENGD 175
Query: 88 YVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + +D + +FD A+ W G G L A HE GHALGL
Sbjct: 176 HGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN-GFNLFTVAAHEFGHALGL 234
Query: 135 MHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H + YP Y N Y F D+ +Q
Sbjct: 235 AHSTDPSALMYPTYKYQNPY----------------------GFHLP----KDDVKGIQA 268
Query: 194 IYGAPKGSLG 203
+YG K LG
Sbjct: 269 LYGPRKPFLG 278
>gi|71051388|gb|AAH99337.1| Mmp18 protein [Xenopus laevis]
Length = 477
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 65/216 (30%), Gaps = 55/216 (25%)
Query: 5 KP---VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP VY + + + + W + Y+ T D+ + + A
Sbjct: 99 KPRCGVYDVGQYST-VAKSSAWQKKDLTYRILNFTPDLPQADV-------ETAIQRAFKV 150
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKA 107
WS V LTF + SDI+ + + +D + + +FD+
Sbjct: 151 WSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDED 210
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ W L A HE GH+LGL H +M
Sbjct: 211 ETWTKTSEIYN-LFLVAAHEFGHSLGLSHSTDQGA-------------------LM---- 246
Query: 168 PQDSMMDASFGYCATPMV--SDIVAVQKIYGAPKGS 201
S T + DI A+Q +YG
Sbjct: 247 ----YPTYSNTDPKTFQLPQDDINAIQYLYGKSSNP 278
>gi|166365707|ref|YP_001657980.1| hypothetical protein MAE_29660 [Microcystis aeruginosa NIES-843]
gi|166088080|dbj|BAG02788.1| hypothetical protein MAE_29660 [Microcystis aeruginosa NIES-843]
Length = 1289
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 73/213 (34%), Gaps = 30/213 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
GA G++ TIY G D+L + + GG N
Sbjct: 1061 GADTFWAGDD----NDFADGGEGHDTIYGENGFDMLRGDAGNDQIYGGTGND-------- 1108
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G E N ++ I+ + G +GND+V G N+ +GND G G D
Sbjct: 1109 -DMYGGEGNDSLFGEDGIDDLNGGNGNDLVSGGLGNDQVKGQAGNDTLIGGQGNDIITGG 1167
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ L+ + + +DF S +++L F ++ +
Sbjct: 1168 GGNDLFTFNEAPG----LNGVDQLRDFNSTLDKLVFDKNVYAGLSGSTLTA-------AQ 1216
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L G V + + + LS G D+ FD
Sbjct: 1217 LRAEAGATVATTASQRFIYNLSNG-DLFFDPDG 1248
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 76/244 (31%), Gaps = 22/244 (9%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D DYE S+ S+ ++ + AT V D+ Q++ G G +
Sbjct: 965 NDADYER-----SLQSF----NTYSSEALLLGATQTVVDVTGTQRLVGRAGYVNGVLV-G 1014
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
D+ + + G L G + L + G T
Sbjct: 1015 NGGNYLDARGVFSPNGEGKASEL-FGGTNGSDQFKGL--AGDDCMWGDGGADTFWAGDDN 1071
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G G+D + G + ++ +GND G +G D + + F I
Sbjct: 1072 DFADGGEGHDTIYGENGFDMLRGDAGNDQIYGGTGNDDMYGGEGNDSL----FGEDGIDD 1127
Query: 329 DANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYE--DLIQVIGQDVFESM 383
+ D +S ++++ + + I+ + + G + + +
Sbjct: 1128 LNGGNGNDLVSGGLGNDQVKGQAGNDTLIGGQGNDIITGGGGNDLFTFNEAPGLNGVDQL 1187
Query: 384 KHFY 387
+ F
Sbjct: 1188 RDFN 1191
>gi|325144664|gb|EGC66962.1| iron-regulated protein FrpA [Neisseria meningitidis M01-240013]
Length = 1429
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 953 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1010
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1011 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LNGGEGNDALYGYNGND 1066
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1067 VLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKD 1126
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1127 IIRFTDGITAD 1137
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1153 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1210
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1211 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1248
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1249 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1306
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1307 GKGFGQDTVYN 1317
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1213 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 1272
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1273 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1332
Query: 390 GLS 392
+
Sbjct: 1333 KAA 1335
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 860 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 919
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 920 YATGRKDIIRFTDGITAD 937
>gi|326914446|ref|XP_003203536.1| PREDICTED: collagenase 3-like [Meleagris gallopavo]
Length = 512
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 58/189 (30%), Gaps = 47/189 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-- 79
WS + Y+ T D+ + + A WS V L F S +DI
Sbjct: 154 WSKTNLTYRIVSYTPDLRRADV-------ERAFKKAFKVWSDVTPLNFTRIRSGTADIMI 206
Query: 80 KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F + +G P Y + +FD + W +G L A HE
Sbjct: 207 SFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDETWSND-SRGYNLFLVAAHEF 265
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H +M P + S D+
Sbjct: 266 GHSLGLEHSRDPGA-------------------LM---FPIYTYTGKSGFVLP---DDDV 300
Query: 189 VAVQKIYGA 197
+Q++YG
Sbjct: 301 QGIQELYGP 309
>gi|71896459|ref|NP_001025501.1| matrix metallopeptidase 1 [Xenopus (Silurana) tropicalis]
gi|89268617|emb|CAJ82765.1| matrix metalloproteinase 1 (interstitial collagenase) [Xenopus
(Silurana) tropicalis]
Length = 467
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 70/222 (31%), Gaps = 54/222 (24%)
Query: 5 KP---VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP VY + + + + W + Y+ T D+ + + A
Sbjct: 89 KPRCGVYDVGQYST-VPKSSAWQKTDLTYRIINFTPDLPQADV-------EAAIQRAFKV 140
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKA 107
WS V LTF + SDI+ S + +D + + +FD+
Sbjct: 141 WSDVTPLTFTRIYNEVSDIEISFSAGDHKDNSPFDGPGGILAHAFQPGNGIGGDAHFDED 200
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ W + L A HE GH+LGL H +M Y
Sbjct: 201 ESWT-KTSQLYNLFLVAAHEFGHSLGLSHSTDPGA-------------------LM-YPS 239
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNI 206
+ +A F DI A+Q +YG P G
Sbjct: 240 YSSTDPNA-FQLPQ----DDINAIQYLYGKSSNPVQPTGPTT 276
>gi|163760942|ref|ZP_02168020.1| iron-regulated protein FrpC [Hoeflea phototrophica DFL-43]
gi|162281723|gb|EDQ32016.1| iron-regulated protein FrpC [Hoeflea phototrophica DFL-43]
Length = 2334
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 4/162 (2%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D+ LD+T + + + G +T+ + +S+ G GND+V
Sbjct: 1219 LVDTAAGVTLDMTTAEIENAVGNAGNDHF-DATGSTVRVTLRGNGGNDSLTGGDGNDLVE 1277
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD---ANEHKQDFL 338
G + GND DG + +DT + Y I + + D + D +
Sbjct: 1278 GGDGADQLTGGGGNDTIDGGADIDTAIFSGNRSDYTIVVEGSGYRITDTRSGSPDGSDLV 1337
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+VE +FAD + ++ + + + + +
Sbjct: 1338 LNVENFQFADMTVAEADLLNSAPTDLALTSSGVAEDATAGQV 1379
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 13/147 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + V I+ ++ G+D+L + + G
Sbjct: 2146 GVTVNLATGTVSGTGVNGTTVSGIEEVWGGDGNDILTGSSAAET-------------LYG 2192
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI+ +++ G G D + G + +++ +G+D G G D F Y A
Sbjct: 2193 DNGNDTISGGAGDDNLYGEVGEDQLSGGTGDDLLSGGAGDDTMFGEDGNDIFIYAAGDGR 2252
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVE 342
+ D ++
Sbjct: 2253 DDVSGGSGGGWTDAITLQGMDGAISID 2279
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 55/189 (29%), Gaps = 29/189 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT---IAQH 265
+ T+ +GG D L+ N GG+ N+T IA
Sbjct: 2032 VPTNTSWETLTFTVTGTGGLDRLEFREDATNNNL----------YGGFFDNVTMLEIADD 2081
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---------YYAPSYLY 316
+++ G +GND + G + ++ +G+D G +G DT +
Sbjct: 2082 P--DTLNGGAGNDTIHGGAQGDLLIGGAGDDRLYGGAGNDTLRLESGADVLDGGDGHDVL 2139
Query: 317 KIYRFENAII-----VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I+ + +S +E + D L + +
Sbjct: 2140 DIWSSGGVTVNLATGTVSGTGVNGTTVSGIEEVWGGDGNDILTGSSAAETLYGDNGNDTI 2199
Query: 372 IQVIGQDVF 380
G D
Sbjct: 2200 SGGAGDDNL 2208
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 7/163 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-AQHTVIE-SVVGSSGNDVVIG 282
G D + + GV +D+ T + G N A + + ++ G+ G+DV+ G
Sbjct: 1118 GAGADTVIVDTAAGV--TLDMTTAEIENAVGNAGNDQFDASGSTVRVTLRGNGGDDVLTG 1175
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDV 341
N+ +G D G G D F+ A L + E+ ++V A D +++
Sbjct: 1176 GEGNDEINGGAGADQLFGGGGDDFFYIDADDTLIRGGAGEDTVLVDTAAGVTLDMTTAEI 1235
Query: 342 ERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
E + D+ R L + L G D+ E
Sbjct: 1236 ENAVGNAGNDHFDATGSTVRVTLRGNGGNDSLTGGDGNDLVEG 1278
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-AQHTVIE-SVVGSSGNDV 279
I+ G D + + GV +D+ G N A + + ++ G+ G+DV
Sbjct: 927 IHGGAGADTVIVDTAAGV--TLDMPAAEIEHAVGNAGNDQFDATGSTVRVTLRGNGGDDV 984
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ G N+ +G D G G D F+ A L + + +IV A D
Sbjct: 985 LTGGEGNDEINGGAGADQLFGGGGNDVFYIDADDTLIRGGAGADTVIVDTAAGVTLD 1041
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 10/136 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+++ I+ G D + + GV +D+ T + G N
Sbjct: 1008 GNDVFYIDADDTLIRG------GAGADTVIVDTAAGV--TLDMTTSEIENAVGNAGNDQF 1059
Query: 263 -AQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
A + + ++ G+ G+DV+ G N+ +G D F G G D + A L +
Sbjct: 1060 DATGSTVRVTLRGNGGDDVLTGGEGNDEINGGAGADQFFGGGGDDFMYIDADDTLIRGGA 1119
Query: 321 FENAIIVYDANEHKQD 336
+ +IV A D
Sbjct: 1120 GADTVIVDTAAGVTLD 1135
>gi|218532859|ref|YP_002423675.1| hypothetical protein Mchl_4982 [Methylobacterium chloromethanicum
CM4]
gi|218525162|gb|ACK85747.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 137
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD YL Y D+R HYI G +EGR+P A F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHDGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 10/89 (11%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
I + + Y Y D+ + H+ G EGRD + F YL +
Sbjct: 24 SIVRTPLPGFDPIYYLYWYPDVRAF----PQGPLVHYIHDGWREGRDPSAGFSGEGYLKA 79
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+R H++ G+ EGR
Sbjct: 80 NPDVRE----SGCNPLVHFVECGLAEGRK 104
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD YL Y D+R HYI G +EGR+P A F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHDGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 519 RNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTS 575
R P F + Y+ + D+ AF P + H+ + G+ EGR + F+ + YL +
Sbjct: 27 RTPLPGFDPIYYLYWYPDV-RAFPQGPLV------HYIHDGWREGRDPSAGFSGEGYLKA 79
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ H++ G+ EGR
Sbjct: 80 NPDVRE----SGCNPLVHFVECGLAEGR 103
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 435 RNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGS 491
R P F + Y+ + D+ AF P + H+ + G EGR F YL +
Sbjct: 27 RTPLPGFDPIYYLYWYPDV-RAFPQGPLV------HYIHDGWREGRDPSAGFSGEGYLKA 79
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGR 519
D+R H++ G+ EGR
Sbjct: 80 NPDVRESG----CNPLVHFVECGLAEGR 103
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR--ALGISGMQF 612
F+P YL Y D+ HYI G +EGR + G SG +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHDGWREGRDPSAGFSGEGY 76
>gi|325980909|ref|YP_004293311.1| hypothetical protein NAL212_0192 [Nitrosomonas sp. AL212]
gi|325530428|gb|ADZ25149.1| hypothetical protein NAL212_0192 [Nitrosomonas sp. AL212]
Length = 361
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 10/167 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G L+ GV + ++ G + I+ +++ G+ G D++
Sbjct: 115 DGTTSLNRDGSTGVNS-----PTNFVGNTGTIFSNVISGTNGADNLTGTPGADIINAGDG 169
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ GND +G G+DT Y Y I + + + D LS +ERL+
Sbjct: 170 LDRLNGVGGNDTLEGGLGIDTAIYSGNRVGYTIATTSSGFNI--SGSEGDDTLSGIERLQ 227
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
FAD + ++ G + GL+
Sbjct: 228 FADTKLAMDLNNGQAANNTARIIG---AAFGVPAITEHPDYVTIGLN 271
>gi|254560782|ref|YP_003067877.1| heme peroxidase with hemolysin-type calcium-binding domain
[Methylobacterium extorquens DM4]
gi|254268060|emb|CAX23932.1| putative heme peroxidase with hemolysin-type calcium-binding domain
[Methylobacterium extorquens DM4]
Length = 3618
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 52/170 (30%), Gaps = 27/170 (15%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF------- 289
N I I G N I + + V G G+D ++GN +
Sbjct: 1909 SSSPNVILGRDGDD-DIEGDVGNDAIYAGSGDDRVDGGEGDDTLLGNDGADTLIGRTGNN 1967
Query: 290 -----------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV----YDANEHK 334
GND G +G DT Y P Y R +V A
Sbjct: 1968 TLDGGNDDDQLSGGHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDNLGAEGDG 2027
Query: 335 QDFLSDVERLRFADQ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L+ +E+++ + + + I+ TA L G D+
Sbjct: 2028 VDTLTTIEQIQMGNDLTPYTLVANGTAAVDIVVGTAGNNTLSGGAGNDLV 2077
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 7/156 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I DSG D D L G N + N+ + G I V G+D
Sbjct: 1390 DIITDSG--DTGDF-LKGEDGNDVIANSNGIDILMGGRGKDAIFVGVDATEVFAGEGDDF 1446
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
VIG ++ + G+D +G G DT + + ++ +EH D S
Sbjct: 1447 VIGGDDADLLMGNEGDDWMEGGGGFDTTAGDNSELFFNSAIKGHDVMFAGGDEHDFDGES 1506
Query: 340 DVERLRFADQCIDSVNVKQRSILEY----TASYEDL 371
+ + + + + + Y A+ D+
Sbjct: 1507 GDDIMVQGESVMRNEGMFGFDWAIYKGNQIAANADM 1542
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 6/114 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVV 272
+ TI GDD + L GG + + + + + E + + V+
Sbjct: 3332 NGTAGADTILGLDGDDNI---LAGGGADVV--RAGAGNDFVDAGEGRDVVFAGDGDDDVL 3386
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G D+V G+ N+ +GND+ +G DT L+ +
Sbjct: 3387 SGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLFVAETGDGDDT 3440
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 14/187 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++++ E D + G G D LD++ I I +N + + G +
Sbjct: 3426 GDDLFVAETGDGDDTYWGDEMGGGLGSDTLDMSAITAN---IAVNLGTGLAGRGSATSTQ 3482
Query: 262 IAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +E+VV SGND + + A NV GND + S A + I
Sbjct: 3483 SGRDVLWGVENVVTGSGNDDITASDAANVMDGGEGNDTYRFGS-------AAAANGDTIE 3535
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
F + + + + A V Q + + T D + V G
Sbjct: 3536 GFRPGDKIDLSAIDADAGQAGNQAFTLA-TGAAFTGVGQLLVTQETRDDGDYVVVQGNTA 3594
Query: 380 FESMKHF 386
++ F
Sbjct: 3595 GDASPEF 3601
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + ++++ G+D + G++ ++ +G D+ +G +G D + +
Sbjct: 1345 VLVGGTDGNDTIITDFGDDGIWGDAGDDRIEAGAGVDLVNGGAGDDIITDSGDTGDFLKG 1404
Query: 320 RFENAIIVYDANEHKQDFLSD 340
N +I AN + D L
Sbjct: 1405 EDGNDVI---ANSNGIDILMG 1422
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 2/111 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + ++++G G+D ++ +V +GND D G D F A
Sbjct: 3322 IAGGANGDVLNGTAGADTILGLDGDDNILAGGGADVVRAGAGNDFVDAGEGRDVVF--AG 3379
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ A +VY + + L A D+V + L
Sbjct: 3380 DGDDDVLSGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLF 3430
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
LN + + I G + + I + V +GND V +V F G+D G
Sbjct: 3331 LNGTAGADTILGLDGDDNILAGGGADVVRAGAGNDFVDAGEGRDVVFAGDGDDDVLSGGG 3390
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
D + + + + +D + E
Sbjct: 3391 ADMVYGDGGNDRILAGAGNDLVT----AGAGRDTVIGGE 3425
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV-------VIGNSANNVFFESSGNDVF 298
N E S + + + G++G+D+ + G N+ +GND+
Sbjct: 2252 NPEELFSAPTGVVGDSFTGTALNRTFNGTAGDDIANGADTALFGIQPNDTMNGGAGNDIL 2311
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAII 326
+G G DTF + ++
Sbjct: 2312 NGRGGNDTFIQVSTDGRDRVDGGAGTDT 2339
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 7/153 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG + N TI + + G +G+D + + ++ +G+D+ S DT +
Sbjct: 1347 VGGTDGNDTIITDFGDDGIWGDAGDDRIEAGAGVDLVNGGAGDDIITDSG--DTGDFLKG 1404
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERL-RFA---DQCIDSVNVKQRSILEYTASY 368
+ N I + K V+ FA D + + + +
Sbjct: 1405 EDGNDVIANSNGIDILMGGRGKDAIFVGVDATEVFAGEGDDFVIGGDDADLLMGNEGDDW 1464
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ ++ + F+ + G D+ F
Sbjct: 1465 MEGGGGFDTTAGDNSELFFNSAIK-GHDVMFAG 1496
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 22/64 (34%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G++ D+V+G + NN +GND+ +G D + +
Sbjct: 2050 ANGTAAVDIVVGTAGNNTLSGGAGNDLVFAGAGNDNVLWRTGDGRDFVDGGAGTDSFRIM 2109
Query: 331 NEHK 334
N
Sbjct: 2110 NGTG 2113
Score = 40.9 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 10/106 (9%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G + +V ++G D G G D + ++ A D
Sbjct: 3321 VIAGGANGDVLNGTAGADTILGLDGDDNILAGGGAD----------VVRAGAGNDFVDAG 3370
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D D ++ ++ + ++ G D+ +
Sbjct: 3371 EGRDVVFAGDGDDDVLSGGGADMVYGDGGNDRILAGAGNDLVTAGA 3416
Score = 40.5 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 6/128 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
N+ + Q + T + G +++ ++ + + NT + + A
Sbjct: 1846 NVTGADGQVTNGGTFFTPTGATG---VEIRVVANWTSTVAGNTGLQQTASVQSAFVGTAA 1902
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
E + GSS +V++G ++ GND SG D +
Sbjct: 1903 A---EDIAGSSSPNVILGRDGDDDIEGDVGNDAIYAGSGDDRVDGGEGDDTLLGNDGADT 1959
Query: 325 IIVYDANE 332
+I N
Sbjct: 1960 LIGRTGNN 1967
>gi|161869517|ref|YP_001598684.1| iron-regulated protein FrpA, putative [Neisseria meningitidis 053442]
gi|161870279|ref|YP_001599449.1| iron-regulated protein FrpA, putative [Neisseria meningitidis 053442]
gi|161595070|gb|ABX72730.1| iron-regulated protein FrpA, putative [Neisseria meningitidis 053442]
gi|161595832|gb|ABX73492.1| iron-regulated protein FrpA, putative [Neisseria meningitidis 053442]
Length = 1302
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 826 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 883
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 884 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 921
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 922 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 979
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 980 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1027
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1026 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1083
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1084 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1121
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1122 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1179
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1180 GEGFGQDTVYN 1190
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 733 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 792
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 793 YATGRKDIIRFTDGITAD 810
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1086 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 1145
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1146 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1205
Query: 390 GLS 392
+
Sbjct: 1206 KAA 1208
>gi|149203814|ref|ZP_01880783.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. TM1035]
gi|149142931|gb|EDM30973.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. TM1035]
Length = 731
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 10/150 (6%)
Query: 203 GNNIYKI---EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSI 253
G++I + + GDD L D + ID + I
Sbjct: 514 GDDIIGAGFGDDSVTGGAGNDVVAGGAGDDTLEGGDGNDSMSGSFGNDLIDGGEGAD-DI 572
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG TI +SV G G+D ++G N+ ND DG +G DT A +
Sbjct: 573 GGGTGRDTIDAGAGNDSVGGGEGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGAGN 632
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + + + D ++D E
Sbjct: 633 DVITGGTGADQFVFSAFFDGEADVITDFED 662
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 85/264 (32%), Gaps = 36/264 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMT 261
+ + + T+ + GDD+L D + G N I L+ + + I G + N
Sbjct: 432 DVPLASVGTELADTLIGNSGDDVLRGEGGDDGVFGQSGNDI-LDGGAGNDSIAGADGNDL 490
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ +++ G GND + G +++ G+D G +G D A +
Sbjct: 491 ISGGLGNDNIGGGLGNDTIDGGEGDDIIGAGFGDDSVTGGAGNDVVAGGAGDDTLEGGDG 550
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF- 380
+++ + D + E D R ++ A + + G D
Sbjct: 551 NDSM----SGSFGNDLIDGGE------GADDIGGGTGRDTIDAGAGNDSVGGGEGDDSIL 600
Query: 381 -ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
F G GR+ T D D + G+D G D
Sbjct: 601 GGEGNDFLAGG---GRNDTIDGG---AGNDTINAGAGNDVITG-----------GTGADQ 643
Query: 440 FKALEYIASHEDLINAFADAPDLV 463
F + D+I F D D
Sbjct: 644 FVFSAFFDGEADVITDFEDGLDSF 667
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 11/150 (7%)
Query: 200 GSLGNNIY--KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G++ F + D G G D + G ++ ID + S +GG
Sbjct: 538 GGAGDDTLEGGDGNDSMSGSFGNDLIDGGEGADDI---GGGTGRDTIDAGAGNDS-VGGG 593
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-- 314
E + +I + + G ND + G + N+ +GNDV G +G D F + A
Sbjct: 594 EGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFSAFFDGE 653
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERL 344
I FE+ + + D VE +
Sbjct: 654 ADVITDFEDGLDSFFIRRFDPDT--GVENI 681
>gi|300863503|ref|ZP_07108456.1| hypothetical protein OSCI_20002 [Oscillatoria sp. PCC 6506]
gi|300338492|emb|CBN53598.1| hypothetical protein OSCI_20002 [Oscillatoria sp. PCC 6506]
Length = 1451
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 64/318 (20%), Positives = 120/318 (37%), Gaps = 24/318 (7%)
Query: 363 EYTASYEDLIQVIGQDVFESMK-HFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDR 419
Y Y + + I + +S HF ++G+ EGR FD Y Y D+ + +
Sbjct: 27 FYLKKYPGVKEAIDKGEIKSAAEHFLKYGMEEGRICTSLFDKNYYKAKYPDVDDKIKKGK 86
Query: 420 -GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+A + ++ G EG +P+A L Y + + + + D F G +EG
Sbjct: 87 FKSAFQQWLKEGYFEGFSPNALIDLSYYEQENPGADKDIKSGKFINL-LDQFLKKGLKEG 145
Query: 479 RFVT--FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGR-NPDAFKALEYIASHE 534
FD Y + + ++ S + +++ G+++G + F Y H
Sbjct: 146 FSANAIFDIEFYGEKHSEAKDAVKSGKYSSLFEYFLKEGLQKGDISTSLFDEEFYKEQHP 205
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDR-SAAA 591
+ + A + ++F G +G + F+ + YL S + S + A
Sbjct: 206 EALEAVKSGK--YKTIFEYFLQEGMVKGDNPNALFDTEFYLDSDSEAATAIRSGKYKNAL 263
Query: 592 QHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN--- 648
++++ GM +G F + L + A + S +K Y G G
Sbjct: 264 EYFLKVGMAKGDTT---SPLFDADFYLETNAEASAAVK-SGKYKSAFEYFLKVGFGKGDI 319
Query: 649 ---YYDSDLYSMHDINHD 663
+D D YS +I+ D
Sbjct: 320 PTALFDGDFYSQQNIDVD 337
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 54/336 (16%), Positives = 123/336 (36%), Gaps = 20/336 (5%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
++ + ++ I + + S E ++ Y +
Sbjct: 145 GFSANAIFDIEFYGEKHSEAKDAVKSGKYSSLFEYFLKEGLQKGDISTSLFDEEFYKEQH 204
Query: 369 EDLIQVIGQDVFES-MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR-GAAAR 424
+ ++ + +++ ++F + G+ +G + FD+ YL S + S + A
Sbjct: 205 PEALEAVKSGKYKTIFEYFLQEGMVKGDNPNALFDTEFYLDSDSEAATAIRSGKYKNALE 264
Query: 425 HYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT- 482
+++ G+ +G F A Y+ ++ + A + ++F G +G T
Sbjct: 265 YFLKVGMAKGDTTSPLFDADFYLETNAEASAAVKSGK--YKSAFEYFLKVGFGKGDIPTA 322
Query: 483 -FDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINA 539
FD Y D+ ++ G H++ G+KEG N + YI + ++
Sbjct: 323 LFDGDFYSQQNIDVDIDIKGGKFKNKFEHFLKKGIKEGLNFNPLIDVNFYIQQNAEV--D 380
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQH-YIT 596
+ +H G +E I+ F+ D Y+ +L + G + +A + +I+
Sbjct: 381 IDIKAGKFKNKIEHLLKKGLKEDLKISVWFDKDFYIKQGSELGDRIGKGKFKSAFYDFIS 440
Query: 597 HGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSF 632
G+ E ++ + F V + + + S F
Sbjct: 441 KGIFEDKS----PISFFDVAYYRQNFKVEGKSSFLF 472
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 10/186 (5%)
Query: 424 RHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
H+I G+K+ + A F++ Y+ + + A ++ +HF +G EEGR T
Sbjct: 6 EHFIKFGIKQELSFSAIFESEFYLKKYPGVKEAI--DKGEIKSAAEHFLKYGMEEGRICT 63
Query: 483 --FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
FD Y Y D+ + + +A + ++ G EG +P+A L Y +
Sbjct: 64 SLFDKNYYKAKYPDVDDKIKKGKFKSAFQQWLKEGYFEGFSPNALIDLSYYEQENPGADK 123
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAA-QHYIT 596
+ + D F G +EG S F+ + Y + + + S + ++ ++++
Sbjct: 124 DIKSGKFINL-LDQFLKKGLKEGFSANAIFDIEFYGEKHSEAKDAVKSGKYSSLFEYFLK 182
Query: 597 HGMKEG 602
G+++G
Sbjct: 183 EGLQKG 188
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 5/153 (3%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G SG D+ G S ++F +GND F+G +G DTF ++ F
Sbjct: 770 GGSGADIFNGGSGADLFYGGSGADIFSGGAGNDTFNGGAGDDTFTGG---DGADVFVFGT 826
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + N+ DF+S ++L+ SV+ S + + L + + S
Sbjct: 827 TVGLNEGNDIISDFVSSTDKLQITSSGTVSVSFTGSSAVLNLNNNGTLTLLGVTSLGASD 886
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
G G +T + L +Y D G
Sbjct: 887 IEILGGGSVIG--LTSATQTTLAAYGDYSTFTG 917
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 86/229 (37%), Gaps = 13/229 (5%)
Query: 384 KHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGR-NPDA 439
+HF +FG+ + + F+S YL Y ++ + +AA H++ +G++EGR
Sbjct: 6 EHFIKFGIKQELSFSAIFESEFYLKKYPGVKEAIDKGEIKSAAEHFLKYGMEEGRICTSL 65
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y A + D+ + + + G EG D Y
Sbjct: 66 FDKNYYKAKYPDVDDKIKKGK--FKSAFQQWLKEGYFEGFSPNALIDLSYYEQENPGADK 123
Query: 498 VFGSDRG-AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
S + ++ G+KEG + +A +E+ + + ++F
Sbjct: 124 DIKSGKFINLLDQFLKKGLKEGFSANAIFDIEFYGEKHSEAKDAVKSGK-YSSLFEYFLK 182
Query: 557 FGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAA-QHYITHGMKEG 602
G ++G + F+ + Y + + S + ++++ GM +G
Sbjct: 183 EGLQKGDISTSLFDEEFYKEQHPEALEAVKSGKYKTIFEYFLQEGMVKG 231
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++ G SG D+ G + + F +G+D F G +G D+ ++ F
Sbjct: 942 GGSGADNFSGGSGADLFYGGAGADTFSGGAGDDTFSGGAGNDSLSGG---DGADVFVFGT 998
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + ++ F + ++L+ SV+ + + +
Sbjct: 999 TVGLNEGSDTISGFATGTDKLQITSSGTVSVSFSGGDAVLNLNNNGTVT 1047
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 51/143 (35%), Gaps = 4/143 (2%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D + G + D ++ + S+ G + ++ G SG D+ G + + F
Sbjct: 1083 YGDYSTFTG-PIFFDGSSTTGGSVTGTAFADIFKGGSGADNFSGGSGADLFYGGAGADTF 1141
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G+D F G G D+ ++ F + + + ++ F + ++L+
Sbjct: 1142 SGGLGDDTFTGGEGNDSLSGG---DGADVFVFGTTVGLNEGSDTISGFATGTDKLQITSS 1198
Query: 350 CIDSVNVKQRSILEYTASYEDLI 372
SV+ + + +
Sbjct: 1199 GTVSVSFSGGDAVLNLNNNGTVT 1221
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 12/156 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG L T + + G + + I +V ++ D + G
Sbjct: 1237 GGGSLSTTTAANTTPITFNASAPGVYDFSGSTVAVNFVGSSGINNVTATAYADTLYGFEG 1296
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+++F SG D+ G SG D A + ++ VY + D ++D +
Sbjct: 1297 DDIFNGGSGADIISGGSGADLLTGGAGNDVF----------VYSSTSEGGDTITDF--VT 1344
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
S N + + Y A+ + V+ + +
Sbjct: 1345 GDVLRFSSANFGGFTSIIYQAAANTSVSVVDVNFVD 1380
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 78/208 (37%), Gaps = 17/208 (8%)
Query: 468 DHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGR-NPDA 523
+HF FG ++ + F+S YL Y ++ + +AA H++ +G++EGR
Sbjct: 6 EHFIKFGIKQELSFSAIFESEFYLKKYPGVKEAIDKGEIKSAAEHFLKYGMEEGRICTSL 65
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF--NPDLYLTSYDDLWN 581
F Y A + D+ + ++ + GY EG S + Y
Sbjct: 66 FDKNYYKAKYPDVDDKIKKGK--FKSAFQQWLKEGYFEGFSPNALIDLSYYEQENPGADK 123
Query: 582 VFGSDR-SAAAQHYITHGMKEGRALG--ISGMQFKSVMNLSEKSRDKADLSLSFDH---- 634
S + ++ G+KEG + + + ++ + S F++
Sbjct: 124 DIKSGKFINLLDQFLKKGLKEGFSANAIFDIEFYGEKHSEAKDAVKSGKYSSLFEYFLKE 183
Query: 635 --KKVDLYTDYFGDGNYYDSDLYSMHDI 660
+K D+ T F + Y + ++ +
Sbjct: 184 GLQKGDISTSLFDEEFYKEQHPEALEAV 211
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 5/96 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N + + + G GND + G N+ ND G G D+ A
Sbjct: 543 NFDGRGGNDFLFSGPGNDFLQGGEGNDFLDGEQGNDTLVGGPDNDTLWGGQGNDSLLGGA 602
Query: 312 PSYLYKIYRFENAIIVYDANE-----HKQDFLSDVE 342
+ + E+ + N+ D L E
Sbjct: 603 GNDFLLGEQGEDTLKGEAGNDTLLGAQGTDLLEGGE 638
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 13/156 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHT 266
P + G+D LD G + L + G + N ++
Sbjct: 548 GGNDFLFSGPGNDFLQGGEGNDFLD-----GEQGNDTLVGGPDNDTLWGGQGNDSLLGGA 602
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ ++G G D + G + N+ + G D+ +G G D+ + ++ + I
Sbjct: 603 GNDFLLGEQGEDTLKGEAGNDTLLGAQGTDLLEGGEGNDSLSGGEGADVFVFGTNVGSDI 662
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ DF+S ++L+ SV+ S +
Sbjct: 663 IS-------DFVSSSDKLQITSSGTVSVSFTGSSAV 691
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 8/182 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDL---NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ + + + I+L + + + ++T + G +GND
Sbjct: 486 TNINSFIQFIQQNQLTVIINLPGNIPGNDNPETPQQGDITWTGTNGPDRKQGFAGNDNFD 545
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G N+ F GND G G D + + + ++ +
Sbjct: 546 GRGGNDFLFSGPGNDFLQGGEGNDFLDGEQGND--TLVGGPDNDTLWGGQGNDSLLGGAG 603
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD---VFESMKHFYEFGLSEGRDIT 398
+Q D++ + + A DL++ + + FG + G DI
Sbjct: 604 NDFLLGEQGEDTLKGEAGNDTLLGAQGTDLLEGGEGNDSLSGGEGADVFVFGTNVGSDII 663
Query: 399 FD 400
D
Sbjct: 664 SD 665
>gi|1706913|sp|P55127|FRPC_NEIMC RecName: Full=Iron-regulated protein frpC
gi|293963|gb|AAA99902.1| iron-regulated protein [Neisseria meningitidis]
Length = 1829
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1353 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1410
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1411 GSTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 1466
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1467 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1526
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1527 IIRFTDGITAD 1537
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 953 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1010
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1011 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LNGGEGNDALYGYNGND 1066
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1067 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1126
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1127 IIRFTDGITAD 1137
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1153 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1210
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1211 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 1266
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1267 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1326
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1327 IIRFTDGITAD 1337
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1553 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1610
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1611 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1648
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1649 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1706
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1707 GKGFGQDTVYN 1717
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 860 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 919
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 920 YATGRKDIIRFTDGITAD 937
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1613 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGE 1672
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1673 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1732
Query: 390 GLS 392
+
Sbjct: 1733 KAA 1735
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 11/106 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1013 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 1072
Query: 330 ANE-----HKQDFLSD------VERLRFADQCIDSVNVKQRSILEY 364
N+ D L +E +D + Q ++ Y
Sbjct: 1073 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1118
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 11/106 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1213 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1272
Query: 330 ANE-----HKQDFLSD------VERLRFADQCIDSVNVKQRSILEY 364
N+ D L +E +D + Q ++ Y
Sbjct: 1273 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1318
>gi|325142593|gb|EGC64987.1| Iron-regulated protein frpC [Neisseria meningitidis 961-5945]
Length = 1629
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1153 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1210
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1211 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1248
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1249 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1306
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1307 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1354
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 953 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1010
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1011 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 1066
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1067 VLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1126
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1127 IIRFTDGITAD 1137
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1353 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1410
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1411 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1448
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1449 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1506
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1507 GEGFGQDTVYN 1517
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 860 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 919
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 920 YATGRKDIIRFTDGITAD 937
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1413 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 1472
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1473 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1532
Query: 390 GLS 392
+
Sbjct: 1533 KAA 1535
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1013 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGAE 1072
Query: 330 ANE-----HKQDFLSD------VERLRFADQCIDSVNVKQRSILEY 364
N+ D L +E +D + Q ++ Y
Sbjct: 1073 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1118
>gi|239908059|ref|YP_002954800.1| hypothetical protein DMR_34230 [Desulfovibrio magneticus RS-1]
gi|239797925|dbj|BAH76914.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 248
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 50/178 (28%), Gaps = 35/178 (19%)
Query: 37 THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS 96
+ D LN Q R + LTF ET+ +
Sbjct: 55 ADFTALDFAPLNVTQQAAVRLIYATSQSLTGLTFVETADAASADIAFGTMDIAGPSTMAI 114
Query: 97 RYFMEINFDKADV----------------WRYGIG---KGTILSHNALHEIGHALGLMHP 137
YF + D WR + G++ LHEIGH LGL
Sbjct: 115 TYFDAVTGTTDDGSPIFDLKDYVYLDNAEWRATLADPVPGSLGYETILHEIGHTLGLD-- 172
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
Y D+ +VMSY + S V D+ A+ +Y
Sbjct: 173 ------DTAYTRSLPALLDNTDFTVMSYTETDTYKANFS--------VLDVAALHYLY 216
>gi|221131235|ref|XP_002155205.1| PREDICTED: similar to PIF/Harbinger-like protein [Hydra
magnipapillata]
Length = 926
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 82/237 (34%), Gaps = 49/237 (20%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKV 65
++ R ++ + W + ++ + L+ N + + A +W V
Sbjct: 660 NFSNLRPKRYVTQGGKWHKKLLTFQILNYSND--------LSKNQIDKTIKDAFHKWEAV 711
Query: 66 VDLTFEETSIH-SDIK--FISSNNG----YVCTPRYDSRYFM--------EINFDKADVW 110
L F E S +DIK F SN+G + + F +I+FD +++
Sbjct: 712 SRLKFTERSNGIADIKIKFTRSNHGDPYPFDGPGGTLAHAFYPGTHDLSGDIHFDDDELF 771
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
+G LS LHE+GH+LGL H +M + +
Sbjct: 772 TLNTMEGKDLSWVVLHELGHSLGLEHSHEKGA-------------------IMYPWYERH 812
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ DI +Q +YG G+ + K + K+ F + + G
Sbjct: 813 DGREIVLH------EDDIEGIQFLYGKFWEYNGDRLIKGPILTKNIGFTADMVNLDG 863
>gi|167034350|ref|YP_001669581.1| heme peroxidase [Pseudomonas putida GB-1]
gi|166860838|gb|ABY99245.1| Animal haem peroxidase [Pseudomonas putida GB-1]
Length = 3608
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 51/334 (15%), Positives = 99/334 (29%), Gaps = 49/334 (14%)
Query: 53 EVARWALGEW---SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV 109
++ + +L + + V +LT+ F + N T + + AD
Sbjct: 3265 DLVQTSLASYTLGANVENLTYT-----GSSAFTGTGNALANTITGGAGNDLLNGGAGADR 3319
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY---GVDNDYENDSFLTSVMSYF 166
G+G T + N G V G D + + M+
Sbjct: 3320 LVGGVGNDTYVVD------------------NAGDVVVEATGAGTDLVRTTLASYTMAAN 3361
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-----GNNIYKIEVQQ---KDSPF 218
+ + +++I I GA GN+I
Sbjct: 3362 VENLTYTGVGNFSGTGNGLANI-----INGAAGNDTLAGDGGNDILNGNAGNDTLNGDAG 3416
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQHTVIESVVG 273
++ G D L+ + D N G G + ++ +S+ G
Sbjct: 3417 NDQLFGGLGADRLNGGGGDDSLDGGDGNDTLLGDAGNDTLLGGAGDDSLDGGNGNDSLQG 3476
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + G+ + +GND +G+ G DT A + + + + A
Sbjct: 3477 GDGNDTLFGDVGTDTLIGGAGNDFLNGAGGNDTVVGGAGND--TMMATDGNDVFQFAAGF 3534
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
D + + + + Q + + + AS
Sbjct: 3535 GNDLIINFDAIAAGGQDRLDITALNITAATFAAS 3568
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 14/157 (8%)
Query: 236 IGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ G L + + I G N + + + G GND + G ++ G
Sbjct: 3166 LTGTNAANTLTGGAGNDVISGLGGNDILNGLAGADQLFGGVGNDTLNGGDDADLLNGEDG 3225
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVERL 344
ND+ +G G D A + + + + V +A D + +VE L
Sbjct: 3226 NDILNGGLGADVMNGGAGNDTFVVDNVGD--TVTEALNGGTDLVQTSLASYTLGANVENL 3283
Query: 345 RFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + A + L G D
Sbjct: 3284 TYTGSSAFTGTGNALANTITGGAGNDLLNGGAGADRL 3320
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 10/140 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
E ++ + + + ++ G+D V G++ ++V +GND G +G D
Sbjct: 899 HYTGEDHVVLGGTSGNDIIISGDGDDTVYGDAGDDVLEGGAGNDAVLGGAGDDIITDSFG 958
Query: 313 SYLYKIYRFENAIIVYDA--------NEHKQDFLSDVERL--RFADQCIDSVNVKQRSIL 362
+ + I+ QDF+ E + F Q D + + ++
Sbjct: 959 DNRLEGNAGNDVIVAGSMLAAGNLILGGDGQDFIITTEDISTTFGGQGDDFILGAKTNLP 1018
Query: 363 EYTASYEDLIQVIGQDVFES 382
+D I+ QD
Sbjct: 1019 PTGNEGDDWIEKGTQDGAPG 1038
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 41/108 (37%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I +++E ++ G N I + + G +G+D++ ++ GND
Sbjct: 2437 GTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGND 2496
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
V G +G++ + + I N+ ++ + +
Sbjct: 2497 VLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDM 2544
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 45/152 (29%), Gaps = 10/152 (6%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVI--ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
L S+ Y I + +V S G+D V G++ N+ GND G +
Sbjct: 2416 LTAGPDSNYIRYAGAEHIVLGGTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGA 2475
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D I + +++ N + Q +
Sbjct: 2476 GDDIISDMGGDDN--IQGGDGNDVLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDF 2533
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + QD+ + E G S+G
Sbjct: 2534 ILGS------KANEQDMGNEGDDWIEKGTSDG 2559
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 71/211 (33%), Gaps = 18/211 (8%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T++ G+D + + L GG + I + +I G + N + + ++G
Sbjct: 2451 DTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGNDVLHGGNGVNLIIGG 2510
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND ++ + GND GS + + + A + +
Sbjct: 2511 FGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEKGTSDGAP-GDNFDPLG 2569
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF-GLSE 393
D + + ++ I+ + + D + + S + F GL++
Sbjct: 2570 NDPIIGNDVFIGGNENDKFNGEGGDDIMVGSLGFGD------RYIGGSGYDWATFKGLAQ 2623
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
G I + + D+ V GS A R
Sbjct: 2624 GVTIDYSDRFF-----DVPPVPGSGASALVR 2649
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 12/188 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIGGY 256
G GN+ V + + +GG DL+ +L N +L S+ G
Sbjct: 3239 NGGAGNDT--FVVDNVGDTVTEAL--NGGTDLVQTSLASYTLGANVENLTYTGSSAFTGT 3294
Query: 257 EKNM--TIAQHTVIESVVGSSGNDVVIGNSANNV-FFESSGNDVFDG-SSGLDTFFYYAP 312
+ TI + + G +G D ++G N+ +++G+ V + +G D
Sbjct: 3295 GNALANTITGGAGNDLLNGGAGADRLVGGVGNDTYVVDNAGDVVVEATGAGTDLVRTTLA 3354
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
SY + L+++ + A IL A + L
Sbjct: 3355 SYTMAANVENLTYTGVGNFSGTGNGLANI--INGAAGNDTLAGDGGNDILNGNAGNDTLN 3412
Query: 373 QVIGQDVF 380
G D
Sbjct: 3413 GDAGNDQL 3420
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSV 354
+ +G+ DT + + Y + NA+IV D A D L+ +ERL+F+D+ S
Sbjct: 2781 ILNGTDNYDTAVFSGVATDYSVVVDGNAVIVTDLVAGRDGVDHLTGIERLQFSDRSQASG 2840
Query: 355 NVKQRSILEYTA 366
+
Sbjct: 2841 VGTAVNAGPTGH 2852
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 63/210 (30%), Gaps = 48/210 (22%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+ Y + D+ GD +++ T G DL + +S N+
Sbjct: 3325 GNDTY--------------VVDNAGDVVVEATGAGT-----DLVRTTLASY-TMAANVEN 3364
Query: 263 AQHTVIESVVG-SSGNDVVIGNSANNVF----------FESSGNDVFDGSSGLDTFFYYA 311
+T + + G +G +I +A N ++GND +G +G D F
Sbjct: 3365 LTYTGVGNFSGTGNGLANIINGAAGNDTLAGDGGNDILNGNAGNDTLNGDAGNDQLFGGL 3424
Query: 312 PSY-----------------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + N ++ A + D + + L+ D
Sbjct: 3425 GADRLNGGGGDDSLDGGDGNDTLLGDAGNDTLLGGAGDDSLDGGNGNDSLQGGDGNDTLF 3484
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L A + L G D
Sbjct: 3485 GDVGTDTLIGGAGNDFLNGAGGNDTVVGGA 3514
Score = 44.0 bits (102), Expect = 0.094, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 40/108 (37%), Gaps = 9/108 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + ++ G + + ++V+G +G+D++ + +N ++GND
Sbjct: 910 GTSGNDIIISGDGDDTVYGDAGDDVLEGGAGNDAVLGGAGDDIITDSFGDNRLEGNAGND 969
Query: 297 VFDGS----SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
V +G + I + + DF+
Sbjct: 970 VIVAGSMLAAGN--LILGGDGQDFIITTEDISTTF---GGQGDDFILG 1012
>gi|320324247|gb|EFW80326.1| calcium binding hemolysin protein, putative [Pseudomonas syringae
pv. glycinea str. B076]
Length = 4096
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 68/187 (36%), Gaps = 8/187 (4%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI---YKIEVQQ 213
+ SV SYF D + + Q A + GN+ Y +
Sbjct: 721 TDQISVSSYFG-SDGLSSYQLETIRFADGTSWSLDQIKSQAVLSTDGNDSIRGYATDDTL 779
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++Y G+D+L G N I E S+ G + ++ + + G
Sbjct: 780 SGGLGDDSLYGQAGNDVLK----GDAGNDILYGAEGADSLSGGDGQDNLSGGAGADLLAG 835
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SGND + G++ ++V +GND G G DT+ + I ++ + DA E
Sbjct: 836 GSGNDYLFGDAGDDVLDGGAGNDTLSGGEGSDTYRFSRGWGQDTISNYDPSTNKSDAIEF 895
Query: 334 KQDFLSD 340
D L
Sbjct: 896 ASDILPG 902
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 68/187 (36%), Gaps = 8/187 (4%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI---YKIEVQQ 213
+ SV SYF D + + Q A + GN+ Y +
Sbjct: 521 TDQISVSSYFG-SDGLSSYQLETIRFADGTSWSLDQVKSMAVLSTDGNDSIRGYATDDTL 579
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++Y G+D+L G N I E S+ G + ++ + + G
Sbjct: 580 SGGLGDDSLYGQAGNDVLK----GDAGNDILYGAEGGDSLSGGDGQDNLSGGAGADLLAG 635
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SGND + G++ ++V +GND G G DT+ + I ++ + DA E
Sbjct: 636 GSGNDYLFGDAGDDVLNGGAGNDTLSGGEGSDTYRFSRGWGQDTISNYDPSTDKSDAIEF 695
Query: 334 KQDFLSD 340
D L
Sbjct: 696 SSDILPG 702
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 66/187 (35%), Gaps = 8/187 (4%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI---YKIEVQQ 213
+ SV SYF D + + Q A + GN+ Y +
Sbjct: 921 TDQISVSSYFG-SDGLSSYQLETIRFADGTSWSLDQIKSLAVLSTDGNDSIRGYATDDTL 979
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+Y G+D+L G N I + S+ G + ++ + + G
Sbjct: 980 NGGLGDDLLYGQAGNDVLK----GDAGNDILSGADGADSLSGGDGQDNLSGGAGADLLAG 1035
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SGND + G++ ++V +GND G G D + + I ++ + DA E
Sbjct: 1036 GSGNDYLYGDTGDDVLDGGAGNDALSGGEGSDIYRFSRGWGQDTISNYDPSTNKSDAIEF 1095
Query: 334 KQDFLSD 340
D L
Sbjct: 1096 ASDILPG 1102
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 7/144 (4%)
Query: 200 GSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ GN+ Y + +Y G+D+L G N I + S+ G
Sbjct: 181 STDGNDSVWGYASDDTLSGGLGDDVLYGLAGNDVLK----GDAGNDILYGADGADSLSGG 236
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ ++ + + G SGND + G + ++V +GND G G DT+ +
Sbjct: 237 DDQDNLSGGNGADLLAGGSGNDYLSGEAGDDVLNGGAGNDTLSGGEGSDTYRFSRGWGQD 296
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
I ++ + DA E D L
Sbjct: 297 TISNYDPSTNKSDAIEFASDILPG 320
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 13/157 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y+ + +I SGG+D L + G ++ G N T+ +
Sbjct: 3335 YETDDVINAGVGDDSISGSGGNDTL--SGEAGDD-----------TVSGGTGNDTLIGGS 3381
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G G+D++ G N+ + +GNDV DG SG D Y +
Sbjct: 3382 GADTLNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGNDLLNGGNGDDTYLFGKGSGQDR 3441
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
VY ANE + D L V+ + + ++
Sbjct: 3442 VYYANETRADKLDTVKLIDLNAGDVSLSRDGYDLVIR 3478
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N T++ I+++ G GND ++G++ N+ + +G+D+ DG +G D
Sbjct: 3913 IYGADGNDTLSGGDGIDALYGDVGNDHLLGDAGNDTLYGGAGDDLLDGGAGNDALTGSEG 3972
Query: 313 SYLYKIYRFENAIIV 327
S Y V
Sbjct: 3973 SDTYAFGVGGGKDSV 3987
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D +L G + I ++ G N T++ + ++++ G G+D + G + N+
Sbjct: 3147 DQSLTGYAGDDIIDAGAGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTLNG 3206
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+G+D+ DG +G D A Y + +Y ANE + L
Sbjct: 3207 GTGDDILDGGAGNDLLNGGAGDDTYLFGKGSGQDSIYYANESRLGKL 3253
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 221 TIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ + G+D + D TL GG+ + + + G N + +S+ G S
Sbjct: 378 AVLSTDGNDSIRGYASDDTLNGGLGDDVLYGLAGNDVLKGDAGNDILYGAAGADSLSGGS 437
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G++ ++V +GND G G DT+ + I ++ + DA E
Sbjct: 438 GNDYLFGDAGDDVLNGGAGNDTLSGGEGSDTYRFSRGWGQDTISNYDPSTDKSDAIEFAS 497
Query: 336 DFLSD 340
D L
Sbjct: 498 DILPG 502
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 14/170 (8%)
Query: 219 IQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
Q + S GDD L D+ G + ++ ++ G + + T+ + ++
Sbjct: 3701 FQVLQGSDGDDTLSGTSSNDVIDAGLGDDTVN-GGGGDDTLKGNDGSDTLNGGDGNDLLL 3759
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + GN N+V +GNDV +G +G DT+ + S + +
Sbjct: 3760 GGAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYLFGKGSGQDTVNNGG------EVRI 3813
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
K D L + L AD + N + ++ + D
Sbjct: 3814 GKTDTLKLTD-LNAADVQVTRENNDLLIQVIGSSDSLRVASHFAGDATAG 3862
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ ID+ ++ G N T+ + + G GND++ G + N++ GND+
Sbjct: 2972 STDDIIDVAAGDD-TVSGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIGNDI 3030
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIV---YDANEHKQDFLS 339
DG +G D A Y + + Y+A K D +
Sbjct: 3031 LDGGAGNDRLDGGAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVK 3075
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 41/109 (37%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G N + S+ G ++ + + G GND + G++ ++V
Sbjct: 12 DDILNGDAGNDFLYGAKGTDSLSGGGGQDNLSGGAGADLLAGGDGNDYLSGDAGDDVLDG 71
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+GND G DT+ + I ++ I DA E D L
Sbjct: 72 GAGNDTLSGGEDSDTYRFSRGWGQDTIGNYDAGINKSDAIEFASDILPG 120
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 10/148 (6%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------S 249
+ G+++Y ++ Q T++D L G I T
Sbjct: 1313 SHFNQDGDSVYAVDQLQFAD---STVWDGAKLKTEVLKTTGDNDTIIGYQTADQLFGLAG 1369
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + + +++ G G+D ++G + N+ GND+ DG +G D+
Sbjct: 1370 NDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSLAG 1429
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDF 337
S Y R +Y++ ++ +
Sbjct: 1430 GLGSDTYVFRRGSGQDTIYNSVSNEANT 1457
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 13/143 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G+N YK++ + T + + N + S SI G N
Sbjct: 1131 SNDGDNAYKLDEIRFADG---TTWKPDQVKTM-AAFKSTDGNDVLTGYASDDSISGGLGN 1186
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDTFFYY 310
TI +++ G +GND + G N++ + GND DG G DT
Sbjct: 1187 DTIYGRAGNDTLSGEAGNDTLYGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGG 1246
Query: 311 APSYLYKIYRFENAIIVYDANEH 333
S Y + + + +
Sbjct: 1247 MGSDTYVLRKGSGQDQINNYTSD 1269
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 11/129 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + +++ +++ G +G D++ G N+ +G+DV DG +G DT
Sbjct: 24 LYGAKGTDSLSGGGGQDNLSGGAGADLLAGGDGNDYLSGDAGDDVLDGGAGNDTLSGGED 83
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S Y+ R QD + + + I+ + + T SY+DL+
Sbjct: 84 SDTYRFSRG-----------WGQDTIGNYDAGINKSDAIEFASDILPGDIVVTRSYDDLV 132
Query: 373 QVIGQDVFE 381
+ +
Sbjct: 133 LALNGSTDK 141
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +A + + G +GND + G + ++V +GND DG +G D + + + I
Sbjct: 2639 LNLAGTGENDVLAGGAGNDTLSGAAGDDVLDGRTGNDRLDGGAGDDIYLFGKGAGQDTIS 2698
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+E + D SD+ +R A+ + +VN S+
Sbjct: 2699 SYEGRVGKLDTVRLTALNASDISLVRDANDLVINVNGTADSLR 2741
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + +S+ G GNDV+ G + ++ G+D+ DG +G D+ +
Sbjct: 2307 NISGRAGADILDGGAGKDSLYGDEGNDVLRGEADDDTLNGGIGDDLLDGGAGNDSLAGGS 2366
Query: 312 PSYLYKIYRFENAIIVYDA 330
S Y + + ++
Sbjct: 2367 GSDTYVFRKGSGQDTINNS 2385
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 34/84 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + ++G +GND + G + +++ +GND GS G DT+ +
Sbjct: 3921 TLSGGDGIDALYGDVGNDHLLGDAGNDTLYGGAGDDLLDGGAGNDALTGSEGSDTYAFGV 3980
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
+ ++ +
Sbjct: 3981 GGGKDSVNNYDASTSNDTVQFDAS 4004
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 12/163 (7%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+T+ + DD +D G + ++ S ++ G T+ + + + G + +DV
Sbjct: 3530 ETLSGTSADDTID---AGAGDDTVNGMAGSD-TLSGGAGADTLNGNDGNDVLQGGA-DDV 3584
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G ++V +GND DG +G D + + + IY + K D +
Sbjct: 3585 LYGGDGSDVLDGGAGNDRLDGGAGDDIYIFGKGAGQDSIYYAN------ETRAGKMDTVR 3638
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L +D + + + T +I D
Sbjct: 3639 LTD-LNASDVSVTRDGMDLFIRVNGTTDSLRVIYHFLGDATAG 3680
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +++ G G+D ++G N+ GND+ DG G+D+
Sbjct: 1737 TLSGRAGNDILDGGEGNDTLYGEDGSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGK 1796
Query: 312 PSYLYKIYRFENAIIVYDANEHKQD 336
S Y + + ++ +
Sbjct: 1797 GSDTYTFRKGYGQDTINNSAYNDTT 1821
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 33/69 (47%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T++ ++++G G D++ G N++ +GND +G G DT+ +
Sbjct: 2483 LKGASGNDTLSGRAGNDALLGGEGKDMLNGEDGNDILDGGAGNDTLNGGYGSDTYVFRRG 2542
Query: 313 SYLYKIYRF 321
+ + +
Sbjct: 2543 AGQDTVNNY 2551
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND + G + N+ GND DG G D+ S +Y ++R + +
Sbjct: 2144 GEDGNDTLFGGAGNDTLNGGYGNDSLDGGLGNDSLSGGVGSDIY-VFRKGAGQDTINNSA 2202
Query: 333 HKQDFLSDVERLRFADQCIDSVNVK 357
+ + ++ +RF + ++++
Sbjct: 2203 YNDTTVGKLDVIRFEGLNAEDISIR 2227
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 3/108 (2%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+K + T+ S+ GY + I ++V G GND ++G + +
Sbjct: 2948 FWNQSVIKARVLQGTDGDQSLTGYSTDDIIDVAAGDDTVSGGGGNDTLLGGAGADRLNGD 3007
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND+ G +G D + I D +L
Sbjct: 3008 DGNDLLQGGTGNDILNGGIGND---ILDGGAGNDRLDGGAGDDAYLFG 3052
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I+ + + G +G D + G+ N+V + +D +G G D A
Sbjct: 2299 LKGLAGNDNISGRAGADILDGGAGKDSLYGDEGNDVLRGEADDDTLNGGIGDDLLDGGAG 2358
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + + QD +++
Sbjct: 2359 NDSLAGGSGSDTYVFRKGS--GQDTINN 2384
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY+ + + +++ G +GND ++G ++ GND+ DG +G DT
Sbjct: 2474 IFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKDMLNGEDGNDILDGGAGNDTLNGGYG 2533
Query: 313 SYLYKIYRFENAIIV 327
S Y R V
Sbjct: 2534 SDTYVFRRGAGQDTV 2548
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 36/155 (23%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF---- 321
++++G +GND++ G + ++V SGND G G DT+ + S I +
Sbjct: 1579 DGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGSDTYIFRKGSGQDTILNYAYSD 1638
Query: 322 ------------ENAIIVYDANEHKQDFL--------------------SDVERLRFADQ 349
D + +++++F+D
Sbjct: 1639 ATQNKLDVVKLEGLTASQVSIRREGDDLIFQISDTGETLRVSSHFSSDAYAIDQVQFSDG 1698
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++L TA + + +D +
Sbjct: 1699 IFWDKTQITAALLVGTAGDDSITGYATEDKLSGLA 1733
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 6/136 (4%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N ++ + +++ G G+DV+ G + N+V +GND+ G+ G D+
Sbjct: 183 DGNDSVWGYASDDTLSGGLGDDVLYGLAGNDVLKGDAGNDILYGADGADSLSGGDDQDNL 242
Query: 317 KIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
A D+LS + + D+++ + S + +
Sbjct: 243 S----GGNGADLLAGGSGNDYLSGEAGDDVLNGGAGNDTLSGGEGSDTYRFSRGWGQDTI 298
Query: 375 IGQDVFESMKHFYEFG 390
D + EF
Sbjct: 299 SNYDPSTNKSDAIEFA 314
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
ND + G + N+ G+D DG SG DT + S +Y + + ++ +
Sbjct: 1963 ANDTLKGGADNDSLSGGYGDDFLDGGSGNDTLYGGYGSDVYVFGHGSSQDTINNSAYNDT 2022
Query: 336 DF 337
Sbjct: 2023 TV 2024
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T++ + +++ +G+D V G + ++ +G D +G+ G D A
Sbjct: 3523 MQGTAADETLSGTSADDTIDAGAGDDTVNGMAGSDTLSGGAGADTLNGNDGNDVLQGGAD 3582
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
LY + ++ A + D + + F
Sbjct: 3583 DVLY--GGDGSDVLDGGAGNDRLDGGAGDDIYIFGKGAG 3619
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + N ++ + + + G+D + G+ N+ +G+D G +G DT +
Sbjct: 3323 LRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIGGSG 3382
Query: 313 SYLYKIYRFEN 323
+ ++
Sbjct: 3383 ADTLNGDDGDD 3393
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 7/136 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+++D+ LT G N T + G N T++ + + G G D +
Sbjct: 1518 SVWDTSFIKSALLTGNAGDDNITGYETADM--LKGLRGNDTLSGRAGDDVLDGGDGRDTL 1575
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G N+ +GND+ G +G D + + + I + QD + +
Sbjct: 1576 NGEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGSDTYIFRKGS--GQDTILN 1633
Query: 341 VERLRFADQCIDSVNV 356
++D + ++V
Sbjct: 1634 ---YAYSDATQNKLDV 1646
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 2/129 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG E + T+ + + + G +GND + G + ++ +G D G G D A
Sbjct: 2281 LGGTEDDDTLVGYDTDDVLKGLAGNDNISGRAGADILDGGAGKDSLYGDEGNDVLRGEAD 2340
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ A S + F + + TA+ D+I
Sbjct: 2341 DDTLN-GGIGDDLLDGGAGNDSLAGGSGSDTYVFRKGSGQDT-INNSVYNDTTANKLDVI 2398
Query: 373 QVIGQDVFE 381
++ G ++ +
Sbjct: 2399 KLDGLNLSD 2407
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 11/87 (12%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T +D G L + ++ GY+ + I + V G +GND +
Sbjct: 2765 TFWDQGTVKSEVLRGTAADQ-----------TLAGYQADDQIDAGAGDDIVSGGAGNDTL 2813
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF 307
G ++ GNDV G +G D
Sbjct: 2814 KGGIGSDTLNGEEGNDVLRGGAGNDIL 2840
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ G+D++ G + +V +SGND G +G D + E+ + D
Sbjct: 2465 LIGTVGDDIIFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKD---MLNGEDGNDILDG 2521
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+D + Q ++ Y
Sbjct: 2522 GAGNDTLNGG----YGSDTYVFRRGAGQDTVNNYA 2552
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----EN 323
+ + G +G+D++ G++ N+ + + G D G G D A + L +
Sbjct: 4 DLLYGLAGDDILNGDAGNDFLYGAKGTDSLSGGGGQDNLSGGAGADLLAGGDGNDYLSGD 63
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A D LS E +D S Q +I Y A
Sbjct: 64 AGDDVLDGGAGNDTLSGGED---SDTYRFSRGWGQDTIGNYDAG 104
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 34/189 (17%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D + V + + ++ G + N T+ +++ G GND + G
Sbjct: 2119 GGNDTISGRGGDDVLDG----GDGKDTLSGEDGNDTLFGGAGNDTLNGGYGNDSLDGGLG 2174
Query: 286 NNVFFESSGNDV--FDGSSGLDTFFYYAPSYLY----KIYRFENAIIVYDANEHKQDFLS 339
N+ G+D+ F +G DT A + + RFE + + D L
Sbjct: 2175 NDSLSGGVGSDIYVFRKGAGQDTINNSAYNDTTVGKLDVIRFEGLNAEDISIRRESDDLI 2234
Query: 340 ------------------------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+++L+FAD + + + ++L T + L+
Sbjct: 2235 LQIKETGDTLRVTSHFSASAISGYAIDQLQFADGTLMDNSQIKLALLGGTEDDDTLVGYD 2294
Query: 376 GQDVFESMK 384
DV + +
Sbjct: 2295 TDDVLKGLA 2303
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 6/94 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + ++ + + + +G+D V G + N+ SG D G G D A
Sbjct: 3141 LKGSDADQSLTGYAGDDIIDAGAGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAG 3200
Query: 313 SYL------YKIYRFENAIIVYDANEHKQDFLSD 340
+ I + + +L
Sbjct: 3201 NDTLNGGTGDDILDGGAGNDLLNGGAGDDTYLFG 3234
Score = 37.8 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 249 SWSSIGGY-EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S S+I GY + A T++E+ + +++G A++V S +DV G G DT
Sbjct: 1865 SASTIYGYAIDQLQFADGTILENAQIRAA--LLLGTDADDVMTGYSTDDVIAGDGGNDTL 1922
Query: 308 FYYAPSY 314
+ S
Sbjct: 1923 SGGSGSD 1929
>gi|332289841|ref|YP_004420693.1| RTX toxin GtxA [Gallibacterium anatis UMN179]
gi|330432737|gb|AEC17796.1| RTX toxin GtxA [Gallibacterium anatis UMN179]
Length = 2038
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 21/266 (7%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN------IYKIEVQ----QK 214
YF+ Q+ D +G ++ K+YG N IY E Q
Sbjct: 1665 YFLAQNGN-DLVYGKEGDDIIFGGAGDDKLYGETGNDTLNGGLGKDLIYGGEGNDTIIQD 1723
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
D+ TI+ G D LDL + + + + S K IE+++G+
Sbjct: 1724 DALSSDTIFGDEGIDTLDLRHLVINDEGLGIVADLQSE--KLYKGTIFDHIYDIENIIGT 1781
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP-SYLYKIYRFENAIIVYDANEH 333
SGND +IGN +N+ + G+D+ +G SG D + + LY + ++ +A +
Sbjct: 1782 SGNDNLIGNHKDNILIGNDGDDILEGYSGNDVLAGGSGINKLYGGQGADIYLLSTNATNY 1841
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D + + ++ K + +D IG+ + E F F + +
Sbjct: 1842 IFDLTKNNLAKLENSEDLNLQFTKDSDDNVTLSFNKDGNT-IGKTIIEKASQFGTFSIGD 1900
Query: 394 GR--DITFDSYLYL----GSYDDLRN 413
G D+ + Y+ S DL
Sbjct: 1901 GYYLDLNDGKFKYILSGESSNADLAQ 1926
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + V G G+D++ G + ++ + +GND +G G D +
Sbjct: 1657 MYGSKGNDYFLAQNGNDLVYGKEGDDIIFGGAGDDKLYGETGNDTLNGGLGKDLIYGGEG 1716
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ I + + + D L D+ L D+ + V Q L ++
Sbjct: 1717 ND--TIIQDDALSSDTIFGDEGIDTL-DLRHLVINDEGLGIVADLQSEKLYKGTIFD 1770
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 8/124 (6%)
Query: 252 SIGGYEKNM-TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
N+ I+ + + GS GND + + N++ + G+D+ G +G D +
Sbjct: 1637 DASDMLYNVEVISASDYDDVMYGSKGNDYFLAQNGNDLVYGKEGDDIIFGGAGDDKLYGE 1696
Query: 311 APSYL-------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ IY E + + D + E + D +N + I+
Sbjct: 1697 TGNDTLNGGLGKDLIYGGEGNDTIIQDDALSSDTIFGDEGIDTLDLRHLVINDEGLGIVA 1756
Query: 364 YTAS 367
S
Sbjct: 1757 DLQS 1760
>gi|209966566|ref|YP_002299481.1| integrins alpha chain, putative [Rhodospirillum centenum SW]
gi|209960032|gb|ACJ00669.1| integrins alpha chain, putative [Rhodospirillum centenum SW]
Length = 630
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + T + + G G D++ G + ++F G+D DG G D ++
Sbjct: 34 LKGRDGDDALYGGTGDDRLYGGRGQDLLAGGAGYDLFLGGIGDDTLDGGEGWDKAYWDGE 93
Query: 313 SYLYKIYRFENAIIVYDANE----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
++ YR E + V D + D L +E+LRF D +D +Q + L A
Sbjct: 94 FREFEFYRVEGWLYVVDTSSRFTDEGTDRLRGIEQLRFRDFGLDLTRTRQVADLSGDAGL 153
Query: 369 E-DLIQVIGQDVFESMKH 385
++ D+ H
Sbjct: 154 GFRIVGAEPGDLAGRALH 171
>gi|325199969|gb|ADY95424.1| Iron-regulated protein frpC [Neisseria meningitidis H44/76]
Length = 1429
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 953 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1010
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1011 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 1066
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1067 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1126
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1127 IIRFTDGITAD 1137
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 65/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V YF S + V D+ V+++ + + G++ Y+
Sbjct: 1153 KDGSGQVTVQYYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1210
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1211 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1248
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1249 TLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1306
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1307 GEGFGQDTVYN 1317
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1213 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1272
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1273 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1332
Query: 390 GLS 392
+
Sbjct: 1333 KAA 1335
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 860 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 919
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 920 YATGRKDIIRFTDGITAD 937
>gi|149203012|ref|ZP_01879983.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149143558|gb|EDM31594.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 983
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 10/150 (6%)
Query: 203 GNNIYKI---EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSI 253
G++I + + GDD L D + ID + I
Sbjct: 766 GDDIIGAGFGDDSVTGGAGNDVVAGGAGDDTLEGGDGNDSMSGSFGNDLIDGGEGAD-DI 824
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG TI +SV G G+D ++G N+ ND DG +G DT A +
Sbjct: 825 GGGTGRDTIDAGAGNDSVGGGEGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGAGN 884
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + + + D ++D E
Sbjct: 885 DVITGGTGADQFVFSAFFDGEADVITDFED 914
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 13/193 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +E ++ F + +SGG+ + T N ++ S + G N +I
Sbjct: 670 DTTITLEGDFSNATFN--VENSGGNTTISSTGAQPEFNIVNGTAGS-EFLPGTLDNDSIT 726
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S+ S GND+V G N+ GND DG G D A +
Sbjct: 727 GGDGNDSIPASDGNDIVFGGLGNDNIGGGLGNDTIDGGEGDDII--GAGFGDDSVTGGAG 784
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+V A D L D +++ +D+ G+D ++
Sbjct: 785 NDVV--AGGAGDDTLEG------GDGNDSMSGSFGNDLIDGGEGADDIGGGTGRDTIDAG 836
Query: 384 KHFYEFGLSEGRD 396
G EG D
Sbjct: 837 AGNDSVGGGEGDD 849
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 11/150 (7%)
Query: 200 GSLGNNIY--KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G++ F + D G G D + G ++ ID + S +GG
Sbjct: 790 GGAGDDTLEGGDGNDSMSGSFGNDLIDGGEGADDI---GGGTGRDTIDAGAGNDS-VGGG 845
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-- 314
E + +I + + G ND + G + N+ +GNDV G +G D F + A
Sbjct: 846 EGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFSAFFDGE 905
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERL 344
I FE+ + + D VE +
Sbjct: 906 ADVITDFEDGLDSFFIRRFDPDT--GVENI 933
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 52/165 (31%), Gaps = 5/165 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+I G+D + + N I +IGG N TI + + G+D
Sbjct: 723 DSITGGDGNDSIPAS----DGNDIVFGGLGNDNIGGGLGNDTIDGGEGDDIIGAGFGDDS 778
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
V G + N+V +G+D +G G D+ + L I D +
Sbjct: 779 VTGGAGNDVVAGGAGDDTLEGGDGNDSMSGSFGNDLID-GGEGADDIGGGTGRDTIDAGA 837
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + + L + + G D +
Sbjct: 838 GNDSVGGGEGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGA 882
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 29/75 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + I ++++G GND + GN N++ G D+ DG GLD A
Sbjct: 183 ISGLDGDDFINGQEGQDTLLGDGGNDSLFGNDGNDLLNGGLGADILDGGFGLDVIQGSAA 242
Query: 313 SYLYKIYRFENAIIV 327
+
Sbjct: 243 ELDGDSVTLAFGDEI 257
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GND +IG ++ G+D +G G DT + F N
Sbjct: 162 VELFPATNGNDTLIGFGTDDAISGLDGDDFINGQEGQDTLLGDGGNDSL----FGNDGND 217
Query: 328 YDANEHKQDFLSD 340
D L
Sbjct: 218 LLNGGLGADILDG 230
>gi|291087214|ref|ZP_06345741.2| conserved hypothetical protein [Clostridium sp. M62/1]
gi|291076001|gb|EFE13365.1| conserved hypothetical protein [Clostridium sp. M62/1]
Length = 234
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFG 416
+ Y EDL G + + + HF G+ EGR F+ +Y + DL FG
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 212
Query: 417 SDRGAAARHYITHGVKEGR 435
+ A HY+ G E R
Sbjct: 213 DNLPAYYEHYMNFGYDENR 231
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
D FD+ Y +DL FG ++ H++T G+KEGR AF Y ++ DL+
Sbjct: 150 DRIFDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 209
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFV 481
AF D + +H+ NFG +E R
Sbjct: 210 AFGDN---LPAYYEHYMNFGYDENRIC 233
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F A+ Y +EDL AF + + +HF G +EGR + F+ +Y + DL
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDL---LNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 209
Query: 498 VFGSDRGAAARHYITHGVKEGR 519
FG + A HY+ G E R
Sbjct: 210 AFGDNLPAYYEHYMNFGYDENR 231
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFA 541
FD+ Y +DL FG ++ H++T G+KEGR +AF Y ++ DL+ AF
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 212
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D + A +H+ NFGY+E R
Sbjct: 213 DN---LPAYYEHYMNFGYDENR 231
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F A+ Y +EDL AF + +HF G +EGR S FN +Y + DL
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQE---DLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 209
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
FG + A +HY+ G E R
Sbjct: 210 AFGDNLPAYYEHYMNFGYDENR 231
Score = 44.0 bits (102), Expect = 0.081, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
F+ Y +DL+ FG ++ H++T GMKEGR N+S + A
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVA-------SEAFNISVYKENNA 205
Query: 627 DLSLSFDHKKVDLYTDYFGDG 647
DL +F Y Y G
Sbjct: 206 DLVQAFGDNLPAYYEHYMNFG 226
Score = 37.0 bits (84), Expect = 9.3, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ V + +I Y + DL+Q G ++ +H+ FG E R
Sbjct: 178 NHFLTSGMKEGRVASEAFNISVYKENNADLVQAFGDNLPAYYEHYMNFGYDENR 231
>gi|113475552|ref|YP_721613.1| peptidase S1 and S6, chymotrypsin/Hap [Trichodesmium erythraeum
IMS101]
gi|110166600|gb|ABG51140.1| peptidase S1 and S6, chymotrypsin/Hap [Trichodesmium erythraeum
IMS101]
Length = 588
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 19/148 (12%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYID--------LNTESWSS-IGGYEKN 259
T+ GG+D L+ + G N I LN + + G N
Sbjct: 348 NGGTGNDTLTGDGGNDRLNGSGGNDRLNGNTGNDILTGGGGNDRLNGGGGNDRLNGNTGN 407
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G GND + GN+ N++ GND +G G D A + +
Sbjct: 408 DILTGGGGNDRLNGGGGNDRLNGNNGNDILTGGGGNDRLNGGGGNDRLNGGAGNDILIGG 467
Query: 320 RFENAIIV-----YDANEHKQDFLSDVE 342
+ I +D+N+ D + + E
Sbjct: 468 GGNDRFIFNSNEKFDSNDFGIDTIKNFE 495
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 62/190 (32%), Gaps = 9/190 (4%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
+GS G++ K + + G+D L + L+G + I
Sbjct: 285 EGSRGDDTIKGGIGNDTINGASGQDRLLGKSGNDFLVGSFGNDALLGEAGDDILKGGGGR 344
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T+ + + GS GND + GN+ N++ GND +G G D
Sbjct: 345 DRLNGGTGNDTLTGDGGNDRLNGSGGNDRLNGNTGNDILTGGGGNDRLNGGGGNDRLNGN 404
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + N + + + + + L L A +
Sbjct: 405 TGNDILT-GGGGNDRLNGGGGNDRLNGNNGNDILTGGGGNDRLNGGGGNDRLNGGAGNDI 463
Query: 371 LIQVIGQDVF 380
LI G D F
Sbjct: 464 LIGGGGNDRF 473
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 62/198 (31%), Gaps = 9/198 (4%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLNTESWS-SIGGYEKN 259
G Y D+ + D G+ + ++ V YI+ T+ S S+ G +
Sbjct: 235 AGITSYGFSSGMYDTD----VDDESGNSNFGEYSVDIRVSAYIEFITDITSLSLEGSRGD 290
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI +++ G+SG D ++G S N+ S GND G +G D
Sbjct: 291 DTIKGGIGNDTINGASGQDRLLGKSGNDFLVGSFGNDALLGEAGDDILKGGGGRDRLN-G 349
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
N + D + + +RL L + L G D+
Sbjct: 350 GTGNDTLTGDGGNDRLNGSGGNDRLNGNTGNDILTGGGGNDRLNGGGGNDRLNGNTGNDI 409
Query: 380 FESMK--HFYEFGLSEGR 395
G R
Sbjct: 410 LTGGGGNDRLNGGGGNDR 427
>gi|325130473|gb|EGC53232.1| iron-regulated protein frpC [Neisseria meningitidis OX99.30304]
gi|325130487|gb|EGC53245.1| Iron-regulated protein frpC [Neisseria meningitidis OX99.30304]
Length = 1102
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 83/281 (29%), Gaps = 59/281 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-----------TILSHN 123
+D + N Y+ Y F + V+ Y G T
Sbjct: 754 DGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLT 813
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCAT 182
E H L ++ S +V SYF S +
Sbjct: 814 FTREGNHLL------------------IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 855
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+K+ + + G++ Y+ +Y + G+DLL+
Sbjct: 856 GKVLDVATVKKL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN------- 906
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
G N +I +++ G GND + G + N+ GND +
Sbjct: 907 ---------------GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLN 951
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G DT A + + + + QD + +
Sbjct: 952 GEDGNDTLIGGAGNDYLEGGSGSDTYVF--GEGFGQDTVYN 990
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y +A+ +
Sbjct: 886 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 945
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 946 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1005
Query: 390 GLS 392
+
Sbjct: 1006 KAA 1008
>gi|122891389|emb|CAM14162.1| novel protein similar to vertebrate matrix metallopeptidase 16
(membrane-inserted) (MMP16) [Danio rerio]
Length = 580
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 59/214 (27%), Gaps = 60/214 (28%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS- 74
+ L Q W I Y +T N + R A W V L FE
Sbjct: 77 YALTGQKWQREHISYSIKNVTPKVG-------NQETHDAIRRAFDVWQGVTPLRFEAVPF 129
Query: 75 -------------------IHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
H D G++ + + +FD + W G
Sbjct: 130 RDLDSGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 189
Query: 115 GK-------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
G L A+HE+GHALGL H +M+ F
Sbjct: 190 PNHDGERTAGNDLFLVAVHELGHALGLEHSSDPTA-------------------IMAPFY 230
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ D+ +QKIYG P +
Sbjct: 231 QYMDTESFKLPH------DDLQGIQKIYGPPNKN 258
>gi|292625366|ref|XP_694153.3| PREDICTED: stromelysin-3 [Danio rerio]
Length = 496
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 61/195 (31%), Gaps = 50/195 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEET-SI 75
L W + YK ++N + V R AL WS L F E S
Sbjct: 114 LFPGRWDKTDLTYKIIQSPR--------QMNLERVRYVIREALRAWSDETPLNFTEVLSG 165
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSH 122
+DI F + +D + EI+FD + W G GT L
Sbjct: 166 RADIMFDFYRYSHGDYLNFDGPGGILAHAFFPRTYREGEIHFDMDESWTLGNSMGTDLLQ 225
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HEIGH LGL H VM+ F +F
Sbjct: 226 VATHEIGHVLGLQHSKVPGA-------------------VMAPF--------YTFSNPVR 258
Query: 183 PMVSDIVAVQKIYGA 197
D +Q +YG+
Sbjct: 259 LSEDDKRGIQALYGS 273
>gi|78189872|ref|YP_380210.1| hypothetical protein Cag_1919 [Chlorobium chlorochromatii CaD3]
gi|78172071|gb|ABB29167.1| hypothetical protein Cag_1919 [Chlorobium chlorochromatii CaD3]
Length = 1526
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 17/178 (9%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNM 260
I V + +Y G + L TL GG + I + + G + N
Sbjct: 1323 IIGDNVTIRGGDGANIVYAGAGRQDIKLGDESDTLHGGTGDDIVASEGGDDWLYGDDGND 1382
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL----- 315
T++ + + G +G+D + G + N+ GND+ +G +G D F +
Sbjct: 1383 TVSGGADNDHLFGGTGDDSLDGGTGNDTLDGGDGNDMLNGGTGNDVFTGGVGTDTIQFAG 1442
Query: 316 ----YKIYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y I A ++ K +D E F D +V + Y
Sbjct: 1443 LFSNYTITYNPGAHQYVLTDTTGATKTVSSTDFELFSFTDGVKSDDDVYAVAANPYGQ 1500
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 24/199 (12%), Positives = 53/199 (26%), Gaps = 11/199 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ N + + + + ++T+ + L+ + I N G +
Sbjct: 1251 TGIDNYVATLSTPDQANVVVRTLELKSANATTGAELVVTGNSAIGSNEALVIDTRGLQPG 1310
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFFYY 310
+ V E + N + G N+ + +G +D G +G D
Sbjct: 1311 SVLNLENV-EFAIIIGDNVTIRGGDGANIVYAGAGRQDIKLGDESDTLHGGTGDDIVASE 1369
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + N+H D + L +L +
Sbjct: 1370 GGDDWLYGDDGNDTVSGGADNDHLFGGTGD-DSLDGGTGNDTLDGGDGNDMLNGGTGNDV 1428
Query: 371 LIQVIGQDVFESMKHFYEF 389
+G D + F +
Sbjct: 1429 FTGGVGTDTIQFAGLFSNY 1447
>gi|1705981|sp|Q10738|MMP7_MOUSE RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|548182|gb|AAA99984.1| matrilysin [Mus musculus]
gi|148692994|gb|EDL24941.1| matrix metallopeptidase 7 [Mus musculus]
Length = 264
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 69/212 (32%), Gaps = 48/212 (22%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W + + Y+ T+ + ++ + AL W
Sbjct: 84 KPRCGVPDVAEYSLMPNSPKWHSRIVTYRIVSYTSDLPRIVV-------DQIVKKALRMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKAD 108
S + L F+ S +DI + + F + +FDK +
Sbjct: 137 SMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W G G A HE GH+LGL H S +VM Y
Sbjct: 197 YWTDGEDAGVNFLFAATHEFGHSLGLSHS-------------------SVPGTVM-Y--- 233
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D S + T DI +QK+YG
Sbjct: 234 PTYQRDYSEDFSLT--KDDIAGIQKLYGKRNT 263
>gi|320330331|gb|EFW86314.1| hypothetical protein PsgRace4_09215 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 774
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 77/246 (31%), Gaps = 38/246 (15%)
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
Y ++ G+ ++H+ G G + F + Y D++ V H
Sbjct: 30 YTYQLKKAGKKTKNPVEHYLLEGCKIGLEPHPCFVTDFYFEHNKDVQEVNAH----PFIH 85
Query: 426 YITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
++ +G KE R + F Y ++ G + F +F + G+
Sbjct: 86 FVMYGYKENRLTREGFSLSRYREQRPEIEK----------TGANPFKHFTKKYGQHQPVP 135
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ + L + +D + + + G F + Y +
Sbjct: 136 NLVEAPQQIKLPQLSATDIKSLSEQAVQLG--------LFDSQWY-------SERYGKQF 180
Query: 545 DLVQAGKDHFSNFGYEE--GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
D + + S F+ + Y D+++ + + HY+ G +EG
Sbjct: 181 DSSENAFADYLEKSRFPPVNPSNYFDTETYHRMNTDVYHA----QISPLYHYLISGRQEG 236
Query: 603 RALGIS 608
R +
Sbjct: 237 RTYHAN 242
>gi|86747930|ref|YP_484426.1| hemolysin-type calcium-binding region [Rhodopseudomonas palustris
HaA2]
gi|86570958|gb|ABD05515.1| Hemolysin-type calcium-binding region [Rhodopseudomonas palustris
HaA2]
Length = 2885
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 56/164 (34%), Gaps = 7/164 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI G D+LDL+ G ++L + S G + + IES V +GNDV+
Sbjct: 2639 TIVGGEGFDVLDLSDATGA-VTLNLAAGTVSGAGIGTDHFS-----SIESFVFGAGNDVI 2692
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + ++ +GND G +G DT + N I+ S
Sbjct: 2693 TGGNGDDSLDGGAGNDTIAGGNGNDTLSGGDGNDAID-GGSGNDIVDGGLGNDTLKGGSG 2751
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D I+ + L G D+
Sbjct: 2752 NDVIAAGDGDDTVDAGSGDDIVTGGLGNDTLKGGSGADIITGGA 2795
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 63/184 (34%), Gaps = 10/184 (5%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGG 255
G GN+ I G+D++D L L S + I
Sbjct: 2703 GGAGNDTIAGGNGNDTLSGGDGNDAIDGGSGNDIVDGGLGNDT-----LKGGSGNDVIAA 2757
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + T+ + + V G GND + G S ++ +GND+ G SG D F + A
Sbjct: 2758 GDGDDTVDAGSGDDIVTGGLGNDTLKGGSGADIITGGAGNDILTGGSGADVFVFAAGFGK 2817
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ F D + D +D + + Q SV V + T + + +
Sbjct: 2818 DTVTDFVTTGSSADLLQFSTDMFADFADVMSHTAQVGSSVVVTLDADTSITLANVQMTSL 2877
Query: 375 IGQD 378
D
Sbjct: 2878 AADD 2881
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+DL+ S + IE+V G +G+D +IG+ NV +G+DV G
Sbjct: 1074 TVDLSAGEASGDDAGYDTL-----VAIENVTGGAGDDTLIGDGNANVLSGGAGDDVLSGG 1128
Query: 302 SGLDTFFYYAPSYL 315
G DT +
Sbjct: 1129 GGADTLIGGDGDDV 1142
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 50/158 (31%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GDD+++L + V I L + + + + ++V G+D V G +
Sbjct: 946 GDGDDVVNLYVGTSVGGTIVLGSGNDLLTASANGDFVVDAGDGDDTVAFGDGDDQVKGGA 1005
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N++ + +D G G D A + ++ ++
Sbjct: 1006 GNDMLYGGGDDDFVSGGEGDDYLQGNAGDDELLGGAGNDTLLGGAGDDTIDGGDGIDTAD 1065
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D +V++ A Y+ L+ +
Sbjct: 1066 YAFDIAGVTVDLSAGEASGDDAGYDTLVAIENVTGGAG 1103
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 60/173 (34%), Gaps = 18/173 (10%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTE----SWSS----IGGYEKNMTIAQHTVIESVV 272
TI G+DLL + G +D ++ + G N + + V
Sbjct: 963 TIVLGSGNDLLTASANG--DFVVDAGDGDDTVAFGDGDDQVKGGAGNDMLYGGGDDDFVS 1020
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--- 329
G G+D + GN+ ++ +GND G +G DT Y F+ A + D
Sbjct: 1021 GGEGDDYLQGNAGDDELLGGAGNDTLLGGAGDDTIDGGDGIDTAD-YAFDIAGVTVDLSA 1079
Query: 330 ----ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ D L +E + + ++L A + L G D
Sbjct: 1080 GEASGDDAGYDTLVAIENVTGGAGDDTLIGDGNANVLSGGAGDDVLSGGGGAD 1132
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 40/138 (28%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + ++V G+D V G + N++ + G+D G G D A
Sbjct: 1992 TASAYGDFVVDAGDGDDTVAFGDGDDQVKGGAGNDMLYGGGGDDFVSGGDGDDYLQGNAG 2051
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ ++ D +V+ +++ ++LI
Sbjct: 2052 DDELLGGAGNDTLLGGAGDDTLDGGDGIDTADYAFDLAGITVDFAAGTVVGDDQGADELI 2111
Query: 373 QVIGQDVFESMKHFYEFG 390
+ F
Sbjct: 2112 DIEKVIGGAGDDLFIVAA 2129
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 18/103 (17%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA GN++ + GDD + + G
Sbjct: 1980 GAVLLGSGNDLLTASAYGD-----FVVDAGDGDDTVAFGDGDDQ-------------VKG 2021
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N + + V G G+D + GN+ ++ +GND
Sbjct: 2022 GAGNDMLYGGGGDDFVSGGDGDDYLQGNAGDDELLGGAGNDTL 2064
Score = 40.5 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 64/221 (28%), Gaps = 24/221 (10%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD-SGGDDL 230
+GY AT + +D +++ G +G+ + T D GG+D+
Sbjct: 2515 NGSGGWGYLATVIQND-GSIEGRDGFGIKLVGDFDDTLTSTGTIIGGNGTAIDMGGGNDI 2573
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV---------I 281
+ L+ V I L + E+V G +G D++
Sbjct: 2574 VALSGASAVTGKILLGAG----------DDVFTGAAQAETVDGGAGADMISGGAGDDVLD 2623
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G +++ G+D G G D + + + D S +
Sbjct: 2624 GGDGDDLLRGGDGDDTIVGGEGFDVLDLSDATGAVTLNLAAGTV---SGAGIGTDHFSSI 2680
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
E F L+ A + + G D
Sbjct: 2681 ESFVFGAGNDVITGGNGDDSLDGGAGNDTIAGGNGNDTLSG 2721
>gi|149201942|ref|ZP_01878916.1| Nidogen, extracellular region [Roseovarius sp. TM1035]
gi|149144990|gb|EDM33019.1| Nidogen, extracellular region [Roseovarius sp. TM1035]
Length = 936
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D + + + ID + IGG TI +SV G G+D
Sbjct: 748 DTLSGGDGNDSMSGSF---GNDLIDGGEGAD-DIGGGTGQDTIDAGAGNDSVGGGEGDDS 803
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G N+ ND DG +G DT A + + + + + + D ++
Sbjct: 804 ILGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFSAFFDGEADVIT 863
Query: 340 DVER 343
D E
Sbjct: 864 DFED 867
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I + +VG++ ND + N+ ++ +GND+ DG +G DT + + Y
Sbjct: 3 GLVIPGTPEADDLVGTADNDTITANAGDDTLTGGAGNDLLDGGAGFDTAVFAGNAADYST 62
Query: 319 YRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
E+A + D L +++RL+F + D + +
Sbjct: 63 GVNESAQRTITHTATGDTDILVNIQRLQFDNISTDVLLNPDNT 105
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 5/147 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++ G + D G ++ ID + S +GG E +
Sbjct: 743 GGAGDDTLSGGDGNDSMSGSFGNDLIDGGEGADDIGGGTGQDTIDAGAGNDS-VGGGEGD 801
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYK 317
+I + + G ND + G + N+ +GNDV G +G D F + A
Sbjct: 802 DSILGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFSAFFDGEADV 861
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERL 344
I FE+ + + D VE +
Sbjct: 862 ITDFEDGLDSFFIRRFDPDT--GVENI 886
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N +A +++ G GND + G+ N++ G D G +G DT A
Sbjct: 731 SVTGGAGNDVVAGGAGDDTLSGGDGNDSMSGSFGNDLIDGGEGADDIGGGTGQDTIDAGA 790
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ +++I+ D N+ + A + I T + + +
Sbjct: 791 GNDSVGGGEGDDSILGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFV 850
Query: 372 IQVIGQDVFESMKHF 386
+ + F
Sbjct: 851 FSAFFDGEADVITDF 865
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 8/153 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT----- 306
++ G E N T+ T+ +++ G G+D + G N+ GND DG +G D
Sbjct: 632 NLEGTEGNDTLLGATLDDTLSGLGGDDRLEGRGGNDQLSGGEGNDTLDGGAGDDRISSSD 691
Query: 307 ---FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + + + + L
Sbjct: 692 GNDLAIGGAGNDNIGGGLGDDTLDGGDGDDILGGGFGADSVTGGAGNDVVAGGAGDDTLS 751
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + G D+ + + + G G+D
Sbjct: 752 GGDGNDSMSGSFGNDLIDGGEGADDIGGGTGQD 784
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 66/203 (32%), Gaps = 11/203 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++ + + + +T+ + D + L L G N L ++ G +
Sbjct: 603 TGDSSFFDSAAEVPASVTETVTTA---DPVSLNLEGTEGNDTLLGATLDDTLSGLGGDDR 659
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GND + G + ++ S GND+ G +G D
Sbjct: 660 LEGRGGNDQLSGGEGNDTLDGGAGDDRISSSDGNDLAIGGAGNDNIGGGLGDDTLDGGDG 719
Query: 322 ENAI--------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ + + A + + L D +++ +D+
Sbjct: 720 DDILGGGFGADSVTGGAGNDVVAGGAGDDTLSGGDGNDSMSGSFGNDLIDGGEGADDIGG 779
Query: 374 VIGQDVFESMKHFYEFGLSEGRD 396
GQD ++ G EG D
Sbjct: 780 GTGQDTIDAGAGNDSVGGGEGDD 802
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 56/203 (27%), Gaps = 34/203 (16%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
+ T+ GGDD L+ GG L+ + + G + I+
Sbjct: 639 NDTLLGATLDDTLSGLGGDDRLE--GRGGNDQ---LSGGEGNDTLDGGAGDDRISSSDGN 693
Query: 269 ESVVGSSGNDVV---------------------------IGNSANNVFFESSGNDVFDGS 301
+ +G +GND + G + N+V +G+D G
Sbjct: 694 DLAIGGAGNDNIGGGLGDDTLDGGDGDDILGGGFGADSVTGGAGNDVVAGGAGDDTLSGG 753
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D+ + L I + D + + + + +
Sbjct: 754 DGNDSMSGSFGNDLID-GGEGADDIGGGTGQDTIDAGAGNDSVGGGEGDDSILGGDGNDF 812
Query: 362 LEYTASYEDLIQVIGQDVFESMK 384
L + + G D +
Sbjct: 813 LAGGGRNDTIDGGAGNDTINAGA 835
>gi|111955033|ref|NP_034940.2| matrilysin [Mus musculus]
gi|74190529|dbj|BAE25921.1| unnamed protein product [Mus musculus]
gi|111306729|gb|AAI20656.1| Matrix metallopeptidase 7 [Mus musculus]
gi|111599927|gb|AAI19058.1| Matrix metallopeptidase 7 [Mus musculus]
gi|220938620|emb|CAX16110.1| matrix metallopeptidase 7 [Mus musculus]
Length = 267
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 68/212 (32%), Gaps = 48/212 (22%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W + + Y+ T+ + ++ + AL W
Sbjct: 87 KPRCGVPDVAEYSLMPNSPKWHSRIVTYRIVSYTSDLPRIVV-------DQIVKKALRMW 139
Query: 63 SKVVDLTFEETS-IHSDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKAD 108
S + L F+ S +DI + + F + +FDK +
Sbjct: 140 SMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKDE 199
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W G G A HE GH+LGL H S +VM
Sbjct: 200 YWTDGEDAGVNFLFAATHEFGHSLGLSHS-------------------SVPGTVM----Y 236
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D S + T DI +QK+YG
Sbjct: 237 PTYQRDYSEDFSLT--KDDIAGIQKLYGKRNT 266
>gi|317403331|gb|EFV83845.1| hemolysin-type calcium-binding region [Achromobacter xylosoxidans
C54]
Length = 1141
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 5/141 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
++Y+ ++ + F GGDD + GG + I ++ G + N
Sbjct: 918 APTNGDLYQY-IKDHHADFNLADDPRGGDDTI----HGGTGDDIIYGQGGNDTLYGDDGN 972
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + + G GNDV+ G S N+ +GND+ G G DT A S +K
Sbjct: 973 DIIYGGAGDDKLYGGEGNDVLHGGSGNDTLEGGNGNDLLIGGKGDDTLIGGAGSDTFKWE 1032
Query: 320 RFENAIIVYDANEHKQDFLSD 340
+ A + +DF D
Sbjct: 1033 LGDQGTTAKPAVDTIKDFSLD 1053
>gi|302875206|ref|YP_003843839.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578063|gb|ADL52075.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 962
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 68/170 (40%), Gaps = 6/170 (3%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D V +Q + A + N +K + +I + G + D +L ++
Sbjct: 699 DSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSIVYANGTEEKD-SLYAAGPVTMN-G 756
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ N I I++++ +GND + G N++ + G+D+ +G G DT
Sbjct: 757 YGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDILEGGLGNDT 816
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ A +Y + + I+Y+++ D ++L F D +
Sbjct: 817 LYGEAGQDVYVFRKGDGQDIIYNSSSLDTD----NDKLSFTDVNLSETTF 862
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 8/186 (4%)
Query: 185 VSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
V DI A+ K Y + I + + I G+D L+ +
Sbjct: 518 VLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKVYGG 577
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + I G + T+ +++ GS+G D++ G S ++ G+D+ DG G
Sbjct: 578 NGDDT----IVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKG 633
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT A S Y + + I+ D + ++ L+F D V++
Sbjct: 634 NDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTI---IDTLKFEDIAASEVSLNCTGYDL 690
Query: 364 YTASYE 369
A +
Sbjct: 691 IIAVND 696
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
KN TI ++V G G+D++ G N++ G+D+ +G G DT + A +Y
Sbjct: 381 SKNETIFALASDDTVYGYGGDDLLYGGEGNDILHGGQGDDLLEGGLGNDTLYGEAGQDIY 440
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + + D ++ LRF D
Sbjct: 441 VFRKGDGQDTINDTAGENNTI---IDTLRFED 469
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G++ N T+ + V G +G+D ++GN+ ++ +G D GS+G D +
Sbjct: 556 INGFDGNDTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSE 615
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
E + D E D L+ +D + Q I++Y+ +I
Sbjct: 616 DDT---LNGEIGDDILDG-EKGNDTLTGG---AGSDTYVFRKGDGQDIIVDYSGEANTII 668
Query: 373 QVIGQDVFES 382
+ + +
Sbjct: 669 DTLKFEDIAA 678
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 6/92 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I + T+ + + + G GND++ G +++ GND G +G D + +
Sbjct: 385 TIFALASDDTVYGYGGDDLLYGGEGNDILHGGQGDDLLEGGLGNDTLYGEAGQDIYVFRK 444
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
I N D L +
Sbjct: 445 GDGQDTINDTAGE------NNTIIDTLRFEDI 470
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S N TI +++GS D + G S + G+D +G G DT+ +
Sbjct: 223 SYYTYVTGNGTIEGTIGKNNIIGSVNTDQISGLSGADFIDGKGGSDYINGGVGNDTYIFN 282
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
I ++ A V D + + D+ + F
Sbjct: 283 LGYGTMVIEDYDEATGVIDTIKFGEGI--DINSIGF 316
>gi|260803725|ref|XP_002596740.1| hypothetical protein BRAFLDRAFT_129804 [Branchiostoma floridae]
gi|229281999|gb|EEN52752.1| hypothetical protein BRAFLDRAFT_129804 [Branchiostoma floridae]
Length = 592
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 63/196 (32%), Gaps = 42/196 (21%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK- 80
W + YK V ++E + + A W++V LTF E +DI
Sbjct: 144 WDKTDLTYKF-VSYGDPTVLSLSE--SDIRYAVERAFAVWAEVAPLTFTEVWYGDADINI 200
Query: 81 ----------FISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F G V + + +FD+ + W G G G + A HE
Sbjct: 201 DFRRFYHGDNFPFDGAGGVLAHAFFPGEGIGGDTHFDEDEPWSVGTGTGVDIFVTASHEF 260
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H SF S+MS + M T D
Sbjct: 261 GHALGLHHS-------------------SFPGSLMSPYYNYYDMDTF------TLPDDDR 295
Query: 189 VAVQKIYGAPKGSLGN 204
+Q +YG +
Sbjct: 296 QGIQTLYGRRHYRNQD 311
>gi|300312190|ref|YP_003776282.1| hemolysin-type calcium binding protein [Herbaspirillum seropedicae
SmR1]
gi|300074975|gb|ADJ64374.1| hemolysin-type calcium binding protein [Herbaspirillum seropedicae
SmR1]
Length = 1139
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 35/181 (19%)
Query: 253 IGGYEKNMTIAQHTVIESVVG------------SSGNDVVIGNSANNVFFESSGNDVFDG 300
I G + N I + + G + G+D++ G + N+ F SGNDV DG
Sbjct: 575 IYGGKGNDVIQGGDGDDLIYGDDMEYFWMQPDTTGGDDLLYGGAGNDSLFGGSGNDVLDG 634
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLRFADQCI 351
SG D+ Y + + + + D + ++E LR A+
Sbjct: 635 GSGNDSLVGGLGDDTYVVD--GAGDTIREDADQGHDTVVASCSYTLGRNLEDLRLAEGGQ 692
Query: 352 DSVNVK----------QRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITF 399
+ Q +IL+ + L+ G D + + EG D F
Sbjct: 693 FNGTGNAQDNLITGNSQDNILDGGRGADTLMGGTGNDSYFVDDVNDKVVEQAGEGVDTVF 752
Query: 400 D 400
Sbjct: 753 S 753
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + T+ +++ G GND + G ++ G D+ DG +G D F
Sbjct: 435 TLVGTTGDDTLWGGAGNDTLFGREGNDRLFGEDGDDQLLGGEGFDLLDGGAGDDQLFGGL 494
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRS 360
+ ++ ++ D + + + + + F D + +
Sbjct: 495 GNDQMWGGDGDDTMMGSDVSNTGRPLPAGQTDDDIMFGGAGKDGMFGGAGN 545
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 24/179 (13%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
KD+ T+ + GDD L GG N ++ G E N + +
Sbjct: 425 AGSKDNSGKDTLVGTTGDDTL----WGGAGND---------TLFGREGNDRLFGEDGDDQ 471
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-----------APSYLYKIY 319
++G G D++ G + ++ F GND G G DT + ++
Sbjct: 472 LLGGEGFDLLDGGAGDDQLFGGLGNDQMWGGDGDDTMMGSDVSNTGRPLPAGQTDDDIMF 531
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ + Q + D + + ++ D + + + Y D+IQ D
Sbjct: 532 GGAGKDGMFGGAGNDQMWGGDGDDGLYGNEGDDKLYGEAGNDHIYGGKGNDVIQGGDGD 590
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 20/122 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+ ++V+ GN NV GND G +G DT+ + I +
Sbjct: 980 ATGNELDNVITGNRGANVIRGGRGNDTLIGGAGNDTYVFARGDGQDVIADQDA------- 1032
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+++ L+ +D ++Q ++ + + I V+G + ++K +Y+ G
Sbjct: 1033 ------TRGNIDTLQLSD-------LRQTNLWFSQSGNDLRIDVLGGNDRITIKDWYQGG 1079
Query: 391 LS 392
S
Sbjct: 1080 SS 1081
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFY 309
G E + I + + G GND +IG + N+ F G DV + D
Sbjct: 979 DATGNELDNVITGNRGANVIRGGRGNDTLIGGAGNDTYVFARGDGQDVI---ADQDATRG 1035
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ R N N+ + D L +R+ D + I
Sbjct: 1036 NIDTLQLSDLRQTNLWFSQSGNDLRIDVLGGNDRITIKDWYQGGSSGSDNHI 1087
>gi|238757395|ref|ZP_04618581.1| Serralysin [Yersinia aldovae ATCC 35236]
gi|238704434|gb|EEP96965.1| Serralysin [Yersinia aldovae ATCC 35236]
Length = 259
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 52/165 (31%), Gaps = 32/165 (19%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFI------------SSNN 86
+ ++ +E R AL W++V ++ F E + DI F S N
Sbjct: 79 GLVSIDEGKREYIRKALLLWAEVANIEFIEIPENEINKGDITFSAFKLAATPLELRDSEN 138
Query: 87 GYVCTPR-------------YDSRYFMEINFDKADVWRY--GIGKGTILSHNALHEIGHA 131
+ ++ E D + + LHEIGH
Sbjct: 139 EEYGSADKEYMIDDYEESVTVGFTFWGESEIWLNDAGNILADLSPQSDAQVTVLHEIGHV 198
Query: 132 LGLMHPG-SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
LGL HP N + + +++ S+MSY S
Sbjct: 199 LGLNHPFYDNNALKNNTKLPITHYDNTIQYSLMSYTSEYLSTASF 243
>gi|12585266|sp|O13065|MMP18_XENLA RecName: Full=Matrix metalloproteinase-18; Short=MMP-18; AltName:
Full=Collagenase-4; Short=xCol4; Flags: Precursor
gi|2055321|gb|AAB53148.1| collagenase 4 precursor [Xenopus laevis]
Length = 467
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 65/216 (30%), Gaps = 55/216 (25%)
Query: 5 KP---VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP VY + + + + W + Y+ T D+ + + A
Sbjct: 89 KPRCGVYDVGQYST-VAKSSAWQKKDLTYRILNFTPDLPQADV-------ETAIQRAFKV 140
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKA 107
WS V LTF + SDI+ + + +D + + +FD+
Sbjct: 141 WSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDED 200
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ W L A HE GH+LGL H +M
Sbjct: 201 ETWTKTSEIYN-LFLVAAHEFGHSLGLSHSTDQGA-------------------LM---- 236
Query: 168 PQDSMMDASFGYCATPMV--SDIVAVQKIYGAPKGS 201
S T + DI A+Q +YG
Sbjct: 237 ----YPTYSNTDPKTFQLPQDDINAIQYLYGKSSNP 268
>gi|4104348|gb|AAD02003.1| S-layer-RTX protein [Campylobacter rectus]
Length = 1238
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 67/208 (32%), Gaps = 21/208 (10%)
Query: 194 IYGAP-----KGSLGNN-IYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVK 240
+YG G GN+ IY E K IY G+D + D + G
Sbjct: 887 LYGDNGDDTINGGTGNDQIYGGEGDDKIYGGQGNDKIYGLEGNDTIYGGEGDDEIAGANG 946
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N I + G + N I +++ G GND + G NN + + G+D G
Sbjct: 947 NDIIKGDGGNDILQGNDGNDKIYGGEGDDTIYGGEGNDTIDGEFGNNTIYGNEGDDTIYG 1006
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLS---DVERLRFADQCID 352
G D + + Y+ N I+ + D + + + D
Sbjct: 1007 GEGNDKIYGGQGNDKIYGYKGNNTIMGESGKDSIYGGDGDDTIYGNDGNDIIFGNDGNDT 1066
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ++ A + + G D
Sbjct: 1067 IYGNEDNDLVFGGAGNDTIDGGKGNDAI 1094
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 13/185 (7%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSP--FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
KIYG G + IY E TIY + GDD + GG N +
Sbjct: 967 KIYG---GEGDDTIYGGEGNDTIDGEFGNNTIYGNEGDDTI----YGGEGNDKIYGGQGN 1019
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I GY+ N TI + +S+ G G+D + GN N++ F + GND G+ D F
Sbjct: 1020 DKIYGYKGNNTIMGESGKDSIYGGDGDDTIYGNDGNDIIFGNDGNDTIYGNEDNDLVFGG 1079
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + + +AI + N+ L+D D ++ +++ A +
Sbjct: 1080 AGNDTIDGGKGNDAIYGNNGNDKIYGELND----TLLDGGEGYDSLYFNEDIDFDAIRDT 1135
Query: 371 LIQVI 375
L Q I
Sbjct: 1136 LNQKI 1140
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 10/193 (5%)
Query: 194 IYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
IYG + IY + IY G+D + GG +N I E
Sbjct: 761 IYG---NGGDDTIYGNGGNDVLYGNEGADKIYGGTGNDRI----HGGAQNDIIYGDEGDD 813
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + + TI + + + G G+D++ GN ++ +GND +G G D
Sbjct: 814 EIYGDDGDDTINGNDGDDEIDGGQGDDIIHGNDGDDTIRGGAGNDRIEGGQGDDRLIGDE 873
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + N ++ D + + + +++ + + + + +
Sbjct: 874 GNDHIEGGD-GNDLLYGDNGDDTINGGTGNDQIYGGEGDDKIYGGQGNDKIYGLEGNDTI 932
Query: 372 IQVIGQDVFESMK 384
G D
Sbjct: 933 YGGEGDDEIAGAN 945
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 57/176 (32%), Gaps = 8/176 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D K++ID + + G + I +S+ G +GND + GN N
Sbjct: 273 GTDGTDHIRGTDKKDFIDAKGGND-FVDGLGGDDEIYGGKGNDSLFGGAGNDSIYGNEDN 331
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ER 343
++ GND+ DG G DT + + + + I D L ++
Sbjct: 332 DIIHGDDGNDIIDGGEGNDTIYGDSGDDTIRGGIGNDGIY----GGAGDDTLYGGDGKDK 387
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ D + + + G D + EG D F
Sbjct: 388 ISGGDGDDTLYGDDGNDQMNGGDGKDKVYGGKGNDEIFTYMDDEIVDGGEGTDKLF 443
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 15/172 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI---AQ 264
+ IY +GGDD + G N + E I G N I AQ
Sbjct: 747 QDADTISGKGGNDIIYGNGGDDTI----YGNGGNDVLYGNEGADKIYGGTGNDRIHGGAQ 802
Query: 265 HTVI------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ +I + + G G+D + GN ++ G+D+ G+ G DT A + +
Sbjct: 803 NDIIYGDEGDDEIYGDDGDDTINGNDGDDEIDGGQGDDIIHGNDGDDTIRGGAGNDRIEG 862
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++ +I + N+H + D L + D D++N + Y +D
Sbjct: 863 GQGDDRLIGDEGNDHIEG--GDGNDLLYGDNGDDTINGGTGNDQIYGGEGDD 912
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 222 IYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I GG+D +D GG N SI G E N I + + G G
Sbjct: 289 IDAKGGNDFVDGLGGDDEIYGGKGNDSLFGGAGNDSIYGNEDNDIIHGDDGNDIIDGGEG 348
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
ND + G+S ++ GND G +G DT + ++ + D N+
Sbjct: 349 NDTIYGDSGDDTIRGGIGNDGIYGGAGDDTLYGGDGKDKISGGDGDDTLYGDDGNDQM 406
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 72/217 (33%), Gaps = 19/217 (8%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL------GNNIYKIEVQQK--DSPFIQ 220
+ D +G ++ KIYG + IY E +
Sbjct: 763 GNGGDDTIYGNGGNDVLYGNEGADKIYGGTGNDRIHGGAQNDIIYGDEGDDEIYGDDGDD 822
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI + GDD +D G + I N +I G N I + ++G GND +
Sbjct: 823 TINGNDGDDEIDG---GQGDDIIHGNDGDD-TIRGGAGNDRIEGGQGDDRLIGDEGNDHI 878
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEH 333
G N++ + +G+D +G +G D + KIY E +Y
Sbjct: 879 EGGDGNDLLYGDNGDDTINGGTGNDQIYGGEGDDKIYGGQGNDKIYGLEGNDTIYGGEGD 938
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++ + D D + + Y +D
Sbjct: 939 DEIAGANGNDIIKGDGGNDILQGNDGNDKIYGGEGDD 975
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 1/131 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N I + +++ G+ GNDV+ GN + + +GND G + D +
Sbjct: 751 TISGKGGNDIIYGNGGDDTIYGNGGNDVLYGNEGADKIYGGTGNDRIHGGAQNDIIYGDE 810
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ I + + + D + + D +E + L
Sbjct: 811 GDDEIY-GDDGDDTINGNDGDDEIDGGQGDDIIHGNDGDDTIRGGAGNDRIEGGQGDDRL 869
Query: 372 IQVIGQDVFES 382
I G D E
Sbjct: 870 IGDEGNDHIEG 880
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 7/172 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +Y GDD ++ GG N E I G + N I +
Sbjct: 875 NDHIEGGDGNDLLYGDNGDDTIN----GGTGNDQIYGGEGDDKIYGGQGNDKIYGLEGND 930
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G + N++ GND+ G+ G D + IY E +
Sbjct: 931 TIYGGEGDDEIAGANGNDIIKGDGGNDILQGNDGNDKIYGGEGDD--TIYGGEGNDTIDG 988
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-TASYEDLIQVIGQDVF 380
+ + ++ + + + D + Q + Y ++ G+D
Sbjct: 989 EFGNNTIYGNEGDDTIYGGEGNDKIYGGQGNDKIYGYKGNNTIMGESGKDSI 1040
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 51/173 (29%), Gaps = 43/173 (24%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
++IY E I G+D + D T+ GG+ N I G
Sbjct: 323 DSIYGNEDNDIIHGDDGNDIIDGGEGNDTIYGDSGDDTIRGGIGND---------GIYGG 373
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND------------------VF 298
+ T+ + + G G+D + G+ N+ G D +
Sbjct: 374 AGDDTLYGGDGKDKISGGDGDDTLYGDDGNDQMNGGDGKDKVYGGKGNDEIFTYMDDEIV 433
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQC 350
DG G D F + K+ +D D + E L D
Sbjct: 434 DGGEGTDKLFITSKDDKLKLD--------FDTLRDGLDKRINSFELLHLGDDG 478
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 10/130 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + + GND V G ++ + GND G +G D+ +
Sbjct: 271 IVGTDGTDHIRGTDKKDFIDAKGGNDFVDGLGGDDEIYGGKGNDSLFGGAGNDSIYG--- 327
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+N II D D + + + A + L
Sbjct: 328 -------NEDNDIIHGDDGNDIIDGGEGNDTIYGDSGDDTIRGGIGNDGIYGGAGDDTLY 380
Query: 373 QVIGQDVFES 382
G+D
Sbjct: 381 GGDGKDKISG 390
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 6/180 (3%)
Query: 204 NNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ IY I IY GDD L G K+ I ++ G + N
Sbjct: 350 DTIYGDSGDDTIRGGIGNDGIYGGAGDDTL---YGGDGKDKISGGDGDD-TLYGDDGNDQ 405
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + V G GND + + + G D +S D + + +
Sbjct: 406 MNGGDGKDKVYGGKGNDEIFTYMDDEIVDGGEGTDKLFITSKDDKLKLDFDTLRDGLDKR 465
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N+ + + + F VE Q + +V + + L + +D I++ V
Sbjct: 466 INSFELLHLGDDGKFFNKAVEITNLTPQDVLAVTDDENTKLLIMSDEKDSIRLKNFTVSS 525
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + + + G D + G + GND+ G+ G DT + + + +Y E A
Sbjct: 729 TALATTEATDGPDCIQGTQDADTISGKGGNDIIYGNGGDDTIYGNGGNDV--LYGNEGAD 786
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+Y + + + + D+ D +
Sbjct: 787 KIYGGTGNDRIHGGAQNDIIYGDEGDDEIYGDDGD 821
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 4/136 (2%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D + L + L ++ G TI +S V V+ G + ++
Sbjct: 514 DSIRLKNFTVSSDTTKLRKG-YTRYEGKVGEKTIKVDVKDDSNVMGK---VINGGNTSDS 569
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ G+D G +G DT + I D + D V+ L D
Sbjct: 570 LRGTKGDDEIRGGNGNDTVSGGVGGADSLYGDGGDDRIEGDLKDIILDGGEGVDTLALED 629
Query: 349 QCIDSVNVKQRSILEY 364
ID ++ I +
Sbjct: 630 HEIDLNALQADMIKNF 645
>gi|311267841|ref|XP_003131763.1| PREDICTED: matrix metalloproteinase-28-like [Sus scrofa]
Length = 521
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 61/195 (31%), Gaps = 49/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIK 80
W + Y+ H P + R A WS V L F E + +DI+
Sbjct: 131 WYKQHLSYRLVNWPQHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIR 183
Query: 81 FISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNALHEI 128
+N + + F E +FD+ + W +G L HEI
Sbjct: 184 LTFFQGDHNDGLSNAFDGPGGALAHAFLPRRGEAHFDRDERWSLSRRRGRNLFVVLAHEI 243
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH LGL H + P Y S+ D
Sbjct: 244 GHTLGLTHSAAPRALMAPYYKRLGRDALLSW---------------------------DD 276
Query: 188 IVAVQKIYGAPKGSL 202
++AVQ +YG P+G
Sbjct: 277 VLAVQNLYGKPQGGS 291
>gi|148230386|ref|NP_001088423.1| matrix metalloproteinase-18 precursor [Xenopus laevis]
gi|125858527|gb|AAI29520.1| Mmp18 protein [Xenopus laevis]
Length = 467
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 65/216 (30%), Gaps = 55/216 (25%)
Query: 5 KP---VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP VY + + + + W + Y+ T D+ + + A
Sbjct: 89 KPRCGVYDVGQYST-VAKSSAWQKKDLTYRILNFTPDLPQADV-------ETAIQRAFKV 140
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKA 107
WS V LTF + SDI+ + + +D + + +FD+
Sbjct: 141 WSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDED 200
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ W L A HE GH+LGL H +M
Sbjct: 201 ETWTKTSEIYN-LFLVAAHEFGHSLGLSHSTDQGA-------------------LM---- 236
Query: 168 PQDSMMDASFGYCATPMV--SDIVAVQKIYGAPKGS 201
S T + DI A+Q +YG
Sbjct: 237 ----YPTYSNTDPKTFQLPQDDINAIQYLYGKSSNP 268
>gi|209528197|ref|ZP_03276666.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491363|gb|EDZ91749.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 1313
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 24/189 (12%)
Query: 203 GNNI-YKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
G+++ Y ++ GDD L D + GG + I +
Sbjct: 681 GDDVLYGGSGPDLLYGGAGNDCLFGEAGDDTLLGDSGDDIVFGGSGDDI---------LF 731
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + G G+D + G+ ++ F ++GND G +G D F Y + S
Sbjct: 732 GGPGNDQLYGGADNDILYGGQGDDFLSGDDGDDTLFGNAGNDTLFGGAGNDVFAYISRSQ 791
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRF--ADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ D L D E F +++ Q+ +L T +Y+D +
Sbjct: 792 ITT-----GTDLILDFTPGSDRLLFDREEFGFIQIGTTPENILSPQQLVLVETGTYQDNL 846
Query: 373 QVIGQDVFE 381
+I +
Sbjct: 847 SLINSPILA 855
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 11/144 (7%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNY 242
+ A+Q G +G+ + + +I G+D L D TL G N
Sbjct: 284 VTAIQGR-GGNDTLVGD---QFDQTLDGGTGNDSILGGSGNDTLLGGPGDDTLFGEDGND 339
Query: 243 IDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ L S +++ G + + T+ + +++ G G+D++ S +N+ GND G
Sbjct: 340 L-LQAGSDNNLLYGGKDDDTLLGGSDNDTLFGGLGDDLLQAGSGDNILDGGPGNDTLLGG 398
Query: 302 SGLDTFFYYAPSYLYKIYRFENAI 325
G D+ F + N +
Sbjct: 399 IGNDSLFGGEGNDCLSGGGGNNWL 422
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 24/200 (12%)
Query: 204 NNIYKIEVQ---QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
N I + ++ F T D +D ++ +ID+ + I G +
Sbjct: 634 NTIVRFTPTLPGGTEASFTYTASDGNTEDSANV--------FIDILP--VTRINGLGGDD 683
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + + G +GND + G + ++ SG+D+ G SG D F +
Sbjct: 684 VLYGGSGPDLLYGGAGNDCLFGEAGDDTLLGDSGDDIVFGGSGDDILFGGPGNDQL---- 739
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A DFLS D L A + + +
Sbjct: 740 YGGADNDILYGGQGDDFLSG------DDGDDTLFGNAGNDTLFGGAGNDVFAYISRSQIT 793
Query: 381 ESMKHFYEFGLSEGRDITFD 400
+F R + FD
Sbjct: 794 TGTDLILDFTPGSDR-LLFD 812
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 57/177 (32%), Gaps = 17/177 (9%)
Query: 226 GGDDLLDLTL------IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
GG + TL I+ + I G N T+ +++ G +GND
Sbjct: 256 GGSGSFNYTLRDRHNQFATATATINFQPVTA--IQGRGGNDTLVGDQFDQTLDGGTGNDS 313
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G S N+ G+D G G D A S +Y ++ + +++ D L
Sbjct: 314 ILGGSGNDTLLGGPGDDTLFGEDGNDLL--QAGSDNNLLYGGKDDDTLLGGSDN--DTLF 369
Query: 340 DV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGL 391
+ L+ L + L G D ++ E G
Sbjct: 370 GGLGDDLLQAGSGDNILDGGPGNDTLLGGIGNDSLFGGEGNDCLSGGGGNNWLEGGA 426
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + ++++GS G+D + GN N+ +G+D G G DTF Y +P+
Sbjct: 1016 TAIDGNAGDDTLIGSDGDDSLFGNLGNDCLIGGAGDDTLVGGEGSDTFAYLSPN-----Q 1070
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
++ D L D ++ F ++ +
Sbjct: 1071 INLGVDLIVDFTPGSDRLLFDSDQFGFTRGTTPENSLSPEQFIF 1114
>gi|6752871|gb|AAF27914.1|AF218037_1 RTX protein [Aeromonas salmonicida]
Length = 2747
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 2/162 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
S +D D+ LIGG N I + G N + + +++ G SGND + G S
Sbjct: 2539 SSANDKGDV-LIGGEGNDILFGQGGDDFLFGGAGNDILFGGSGNDTLYGESGNDTLYGGS 2597
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ + +GND G G D + + K + + D +
Sbjct: 2598 GNDTLYGGAGNDTLSGGLGNDILVGGLGNDILKGDAGADTFTWLQGDTTGGTIAKDY-VV 2656
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
F+ D +++ + + + DL ++ H
Sbjct: 2657 DFSRAEGDKLDLSDLLDHDGSHNQNDLKGLLSVFQDSEGVHL 2698
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 69/206 (33%), Gaps = 22/206 (10%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y + D + + +V D+ AV GN I + ++
Sbjct: 1836 YASIGYQISDGANLSNGSKLVIDVAAVADKPTVNVTLTGNGIPSYSPSFPSASITTELFQ 1895
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SG + T G + D ++ +G + ++ H + + G GNDV++G +
Sbjct: 1896 SGN---FNKTAFGITNSLADSSSGQEQVLGNSGNDYIVSTHGGGDLLYGQGGNDVLVGGN 1952
Query: 285 A--NNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFENAII------- 326
A + + GNDV G +G D Y I + +
Sbjct: 1953 ATQGDSLYGGDGNDVLVSGLGSDGLYGGAGTDIAVLTGNRADYTIKKGSGYSVNDRWFDF 2012
Query: 327 -VYDANEHKQDFLSDVERLRFADQCI 351
V + L DVE ++FAD
Sbjct: 2013 SVTEKGAGITKALHDVEYVQFADGIY 2038
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 6/140 (4%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V +YI + + +K + + + G G+D + G + N++ F SG
Sbjct: 2521 TDAQVHDYISSHASEFDQSSANDKGDVLIGGEGNDILFGQGGDDFLFGGAGNDILFGGSG 2580
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCID 352
ND G SG DT + + + + A + D L + D D
Sbjct: 2581 NDTLYGESGNDTLYGGSGNDTL----YGGAGNDTLSGGLGNDILVGGLGNDILKGDAGAD 2636
Query: 353 SVNVKQRSILEYTASYEDLI 372
+ Q T + + ++
Sbjct: 2637 TFTWLQGDTTGGTIAKDYVV 2656
>gi|149202556|ref|ZP_01879528.1| hypothetical protein RTM1035_08064 [Roseovarius sp. TM1035]
gi|149143838|gb|EDM31872.1| hypothetical protein RTM1035_08064 [Roseovarius sp. TM1035]
Length = 951
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 4/124 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D + + + I N + IGG TI +SV G GND
Sbjct: 763 DTLSGGAGNDSISGSFGS---DLIFGNDGAD-DIGGGTGQDTINAGAGDDSVGGGEGNDS 818
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G N+ +D +G +G DT + S + + + + D ++
Sbjct: 819 ILGEDGNDFLAGGGRDDTINGGTGDDTINGGSGSDRMSGGAGTDQFVFSSFFDGEVDVIT 878
Query: 340 DVER 343
D E
Sbjct: 879 DFED 882
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G+D + G + ++ G+D+ G G D + ++ + +
Sbjct: 561 LNGGAGDDTLNGGAGDDRLIGGLGDDLMLGGIGDDVAVFEGVTFDTVAFSLTPGG-LRVV 619
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ D L+DVE + FADQ + V+ +
Sbjct: 620 SALGIDDLTDVEWMEFADQTVSVAEVRVAML 650
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 10/199 (5%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ ++ + G DDL D+ + + + + + G+ + +A
Sbjct: 603 TFDTVAFSLTPGGLRVVSALGIDDLTDVEWMEFADQTVSVAEVRVA-MLGFPGDFVMAGD 661
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT--------FFYYAPSYLYK 317
E + G+ +D +IG +++ GND DG +G D F P
Sbjct: 662 AG-EMLFGTDSDDTLIGGDGDDIISGGLGNDSLDGGAGNDRISASDGNDFILGGPGNDDI 720
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
N I + + + D L A + + G
Sbjct: 721 GGGPGNDTINGGEGDDIIGGGFGADSILGGDGNDVVAGGADNDTLSGGAGNDSISGSFGS 780
Query: 378 DVFESMKHFYEFGLSEGRD 396
D+ + G G+D
Sbjct: 781 DLIFGNDGADDIGGGTGQD 799
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 53/185 (28%), Gaps = 31/185 (16%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND 278
T+ GDD++ G L+ + + I + N I + + G GND
Sbjct: 673 DTLIGGDGDDII-----SGGLGNDSLDGGAGNDRISASDGNDFILGGPGNDDIGGGPGND 727
Query: 279 V------------------VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++G N+V + ND G +G D+ S L
Sbjct: 728 TINGGEGDDIIGGGFGADSILGGDGNDVVAGGADNDTLSGGAGNDSISGSFGSDL----I 783
Query: 321 FENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
F N QD + + + + + + L + + G
Sbjct: 784 FGNDGADDIGGGTGQDTINAGAGDDSVGGGEGNDSILGEDGNDFLAGGGRDDTINGGTGD 843
Query: 378 DVFES 382
D
Sbjct: 844 DTING 848
>gi|145297882|ref|YP_001140723.1| RTX protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142850654|gb|ABO88975.1| RTX protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 3195
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 2/162 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
S +D D+ LIGG N I + G N + + +++ G SGND + G S
Sbjct: 2987 SSANDKGDV-LIGGEGNDILFGQGGDDFLFGGAGNDILFGGSGNDTLYGESGNDTLYGGS 3045
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ + +GND G G D + + K + + D +
Sbjct: 3046 GNDTLYGGAGNDTLSGGLGNDILVGGLGNDILKGDAGADTFTWLQGDTTGGTIAKDY-VV 3104
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
F+ D +++ + + + DL ++ H
Sbjct: 3105 DFSRAEGDKLDLSDLLDHDGSHNQNDLKGLLSVFQDSEGVHL 3146
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 69/206 (33%), Gaps = 22/206 (10%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y + D + + +V D+ AV GN I + ++
Sbjct: 2284 YASIGYQISDGANLSNGSKLVIDVAAVADKPTVNVTLTGNGIPSYSPSFPSASITTELFQ 2343
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SG + T G + D ++ +G + ++ H + + G GNDV++G +
Sbjct: 2344 SGN---FNKTAFGITNSLADSSSGQEQVLGNSGNDYIVSTHGGGDLLYGQGGNDVLVGGN 2400
Query: 285 A--NNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFENAII------- 326
A + + GNDV G +G D Y I + +
Sbjct: 2401 ATQGDSLYGGDGNDVLVSGLGSDGLYGGAGTDIAVLTGNRADYTIKKGSGYSVNDRWFDF 2460
Query: 327 -VYDANEHKQDFLSDVERLRFADQCI 351
V + L DVE ++FAD
Sbjct: 2461 SVTEKGAGITKALHDVEYVQFADGIY 2486
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 6/140 (4%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V +YI + + +K + + + G G+D + G + N++ F SG
Sbjct: 2969 TDAQVHDYISSHASEFDQSSANDKGDVLIGGEGNDILFGQGGDDFLFGGAGNDILFGGSG 3028
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCID 352
ND G SG DT + + + + A + D L + D D
Sbjct: 3029 NDTLYGESGNDTLYGGSGNDTL----YGGAGNDTLSGGLGNDILVGGLGNDILKGDAGAD 3084
Query: 353 SVNVKQRSILEYTASYEDLI 372
+ Q T + + ++
Sbjct: 3085 TFTWLQGDTTGGTIAKDYVV 3104
>gi|83645550|ref|YP_433985.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83633593|gb|ABC29560.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 2074
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 226 GGDDLLDLTLIGGVK-NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D+LD + + + I+L + + IG + I +++ G+ GND +IG
Sbjct: 1864 NGNDVLDFSSVELIGVARIELRNGADTVIGSL-GDDYIDGGFRDDNLRGNDGNDTLIGGR 1922
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
N+ + +G D DG SG D A + +Y + + D+++ Q+ L
Sbjct: 1923 DNDRLYGDNGVDTLDGGSGDDYLDGGAGADVYLYAPSGDVDTIADSDDSGQNNLV 1977
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPF-----IQTIYDSGGDDLLDLTLIGGVKNYIDLNT---ESW 250
+G G++ + + + P I+ I GG +L+ + +Y+D + S
Sbjct: 1665 EGGAGDDEFNFALVKPGDPASQLVSIERIDGGGGRNLIIGSAGYSTTDYLDFSQIELVSV 1724
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I + + + + G +G D++ G + N+ GND G G D
Sbjct: 1725 AAINTVGGDDVVIGSQSADVINGGTGEDILRGQAGNDELIGGQGNDELYGEEGNDRLIGG 1784
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ L ++ I+ +E F+
Sbjct: 1785 SGDDLMSGDAGDDVFILLGGDEGADRFMGG 1814
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 62/191 (32%), Gaps = 27/191 (14%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNY--IDLNTESW 250
KG G++ + I D +I G D + DL + V N +D
Sbjct: 1527 KGGKGDDSFMITAGDAD---ADSIDGGEGIDQILGTPENDLIRLTSVANIEMVDGRGGQD 1583
Query: 251 SSIGGYEKNMTIAQHTV---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+G Y+ ++ + I + SG+DVV G + +V G+D G +G D F
Sbjct: 1584 KIVGTYQNDLLDFRGATLLGITEINAGSGDDVVYGTAGADVLVGEIGDDRLYGGAGDDRF 1643
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDF-------------LSDVERLRFADQCIDSV 354
S + V + +F L +ER+ +
Sbjct: 1644 IVRGASQAGDRFDGGEGFDVLEGGAGDDEFNFALVKPGDPASQLVSIERIDGGGGRNLII 1703
Query: 355 NVKQRSILEYT 365
S +Y
Sbjct: 1704 GSAGYSTTDYL 1714
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 73/199 (36%), Gaps = 10/199 (5%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSS-IGGYEK 258
++ Q + + I GGDD++ + GG I L ++ + + G +
Sbjct: 1710 TTDYLDFSQIELVSVAAINTVGGDDVVIGSQSADVINGGTGEDI-LRGQAGNDELIGGQG 1768
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNV---FFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + + ++G SG+D++ G++ ++V G D F G +G D + +
Sbjct: 1769 NDELYGEEGNDRLIGGSGDDLMSGDAGDDVFILLGGDEGADRFMGGAGFDAIIGSTENNV 1828
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ ++ + + + + + AD + + S+ + +L
Sbjct: 1829 VRLPIMKDGDPKSVLDVEQINLGAGTNLILGADGYNGNDVLDFSSVELIGVARIELRNGA 1888
Query: 376 GQDVFESMKHFYEFGLSEG 394
+ + + G +
Sbjct: 1889 DTVIGSLGDDYIDGGFRDD 1907
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 4/115 (3%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ G+D + G N++ G D G G D + I + ++
Sbjct: 1371 NLQGTDGDDELQGRGGNDLIVGGGGADTIVGGVGADIMLGGKGDDRFLIEGRDIYADLFI 1430
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E L D S+ AS E++ G ++ E +
Sbjct: 1431 GGEGYDRILGG----SGDDVVRLSIYGVFAPEYGDEASVEEIDGGAGYNLIEGTE 1481
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 20/182 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---------GVKNYIDLNTESWSSI 253
G +IY + I GDD++ L++ G ID ++ I
Sbjct: 1421 GRDIYADLFIGGE--GYDRILGGSGDDVVRLSIYGVFAPEYGDEASVEEIDGGAG-YNLI 1477
Query: 254 GGYEKNMTIA-QHTVIESVV---GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G E I HT+++++ G G+D++ G++ ++ G D+ G G D+F
Sbjct: 1478 EGTEGADRIVLTHTLLKNIARIDGLGGDDLIEGSAGADLIVGGPGADILKGGKGDDSFMI 1537
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQ----DFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A I ++++E + V Q +L++
Sbjct: 1538 TAGDADADSIDGGEGIDQILGTPENDLIRLTSVANIEMVDGRGGQDKIVGTYQNDLLDFR 1597
Query: 366 AS 367
+
Sbjct: 1598 GA 1599
>gi|291327537|ref|NP_446415.2| macrophage metalloelastase preproprotein [Rattus norvegicus]
gi|149020732|gb|EDL78537.1| matrix metallopeptidase 12 [Rattus norvegicus]
Length = 477
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 69/197 (35%), Gaps = 51/197 (25%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W ++ Y+ T D+ + + A WS V L F + +DI
Sbjct: 115 SRWMKRYLTYRIYNYTPDMKRADVDY-------IFQKAFQVWSDVTPLRFRKIHKGEADI 167
Query: 80 K--FISSNNGYVC-----TPRYDSRYFM------EINFDKADVWRYGIGKGTILSHNALH 126
F ++G ++ + +FD+A+ W +GT L A+H
Sbjct: 168 TILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 226
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV- 185
E+GH+LGL H + S+M + + T +
Sbjct: 227 ELGHSLGLPHSNNPK-------------------SIM--------YPTYRYLHPNTFRLS 259
Query: 186 -SDIVAVQKIYGAPKGS 201
DI ++Q +YGAP +
Sbjct: 260 ADDIHSIQSLYGAPVKN 276
>gi|54261660|gb|AAH84654.1| Mmp18 protein [Xenopus laevis]
Length = 466
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 65/216 (30%), Gaps = 55/216 (25%)
Query: 5 KP---VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP VY + + + + W + Y+ T D+ + + A
Sbjct: 88 KPRCGVYDVGQYST-VAKSSAWQKKDLTYRILNFTPDLPQADV-------ETAIQRAFKV 139
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKA 107
WS V LTF + SDI+ + + +D + + +FD+
Sbjct: 140 WSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDED 199
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ W L A HE GH+LGL H +M
Sbjct: 200 ETWTKTSEIYN-LFLVAAHEFGHSLGLSHSTDQGA-------------------LM---- 235
Query: 168 PQDSMMDASFGYCATPMV--SDIVAVQKIYGAPKGS 201
S T + DI A+Q +YG
Sbjct: 236 ----YPTYSNTDPKTFQLPQDDINAIQYLYGKSSNP 267
>gi|13124330|sp|Q63341|MMP12_RAT RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|1405805|emb|CAA67142.1| macrophage metalloelastase precursor [Rattus norvegicus]
Length = 465
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 69/197 (35%), Gaps = 51/197 (25%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W ++ Y+ T D+ + + A WS V L F + +DI
Sbjct: 103 SRWMKRYLTYRIYNYTPDMKRADVDY-------IFQKAFQVWSDVTPLRFRKIHKGEADI 155
Query: 80 K--FISSNNGYVC-----TPRYDSRYFM------EINFDKADVWRYGIGKGTILSHNALH 126
F ++G ++ + +FD+A+ W +GT L A+H
Sbjct: 156 TILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 214
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV- 185
E+GH+LGL H + S+M + + T +
Sbjct: 215 ELGHSLGLRHSNNPK-------------------SIM--------YPTYRYLHPNTFRLS 247
Query: 186 -SDIVAVQKIYGAPKGS 201
DI ++Q +YGAP +
Sbjct: 248 ADDIHSIQSLYGAPVKN 264
>gi|329851022|ref|ZP_08265779.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
gi|328839868|gb|EGF89440.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
Length = 4880
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 5/131 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T ++V G+ GND + G + ++ +GND G G DT +
Sbjct: 3893 VTGGANADVLDGGTDNDTVSGNGGNDDITGGTGDDALTGGAGNDTLSGGDGGDTAIFAGA 3952
Query: 313 SYLYKIYRFENAIIVYDAN-----EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y I + V N + D S VE L+FADQ ID I++ +A
Sbjct: 3953 RDQYTIVSDQAGGYVIVDNFPENGDEGTDHFSGVEYLQFADQTIDVTASNFGIIIDGSAI 4012
Query: 368 YEDLIQVIGQD 378
++ G D
Sbjct: 4013 ADNKTGTSGND 4023
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 63/172 (36%), Gaps = 9/172 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK---NMTIAQHTVIESVVGSSGN 277
T G+D ++ + S G + ++ ++V G +
Sbjct: 1460 TADGGDGNDFMNADQAVAYGATLTGGAGDDSLTGTQNNTTSDNSVDGGLGNDTVRGGNNR 1519
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G S N+ + G+D DG SG+D + + I E+ ++ A D+
Sbjct: 1520 DSLFGGSGNDTLYGFGGDDTIDGGSGIDIVYISGNRSSFTITETEDGDVIV-AGSTTTDY 1578
Query: 338 LSDVERLRFADQCIDSVNVK-----QRSILEYTASYEDLIQVIGQDVFESMK 384
L+ +E +RF DQ + + L +A+ + + G D E
Sbjct: 1579 LTGIEVIRFNDQDVSYQGLTLNGGVNGETLTGSAAGDTINGAGGGDRLEGEG 1630
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 18/193 (9%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGV----------KNYIDLNTESWS 251
Y QT+ G+D + D + GG ++ + + + S
Sbjct: 2228 YLSGAAPGGVDGSQTLLGGAGNDTIAANWGDDSAAGGDGDDVMTGYYGQDTLQGDAGNDS 2287
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I N +++ + + G +D + GN ++ + GND DG +G D
Sbjct: 2288 -ISDNSGNNSLSGGDGNDQLTGGDSDDTLSGNGDDDTLTGALGNDSLDGGAGQDVAMLSG 2346
Query: 312 PSYLYKIYRFENAI--IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+Y + + +V + D +S +E +RFAD + + +IL +
Sbjct: 2347 NRAVYSVIQDGAGGYHVVNNRGSDGSDRISSIETVRFADADLVVSSANTGAILTGDNTPS 2406
Query: 370 DLIQVIGQDVFES 382
L D
Sbjct: 2407 TLTGSAFDDSLTG 2419
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 54/160 (33%), Gaps = 3/160 (1%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
+D L L+ + + G + ++ T ++V G +GND + G N
Sbjct: 2921 NDTLAGWDPYSSDGAQTLDGSTGDDVVSGNHSDDSLLGGTGNDTVSGGTGNDTIDGGDDN 2980
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIVYDANEHKQDFLSDVERL 344
+ G+D G G DT Y Y + + +V + + +D L+ VE
Sbjct: 2981 DAVNGGEGDDTISGGLGNDTASYGGNRIYYSVVQDGLGGYAVVANRSSEGEDALNGVETA 3040
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
F D + N I A L D +
Sbjct: 3041 AFNDLSLALDNTTAGEIHTGDADGNSLSGGGLDDSLVGLD 3080
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 20/163 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y ++ +++ D GG DL+ L+ + + + +N
Sbjct: 4072 GGSGNDTYAVDDT--ADLIVES--DGGGTDLV-------------LSDAADYVLADHVEN 4114
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++ I + G++ N+++ GN NN+ +GND G G DTF Y +
Sbjct: 4115 LSLQGPGHI-NGTGNALNNLITGNDGNNLLTGGAGNDTLTGGLGDDTFAVSGLRSAYHVT 4173
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
V D +S VE + FAD + Q + +
Sbjct: 4174 VSGGVYTV--NGTDGTDTVSGVENIEFADGTFAIAAILQVAPV 4214
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I +++ G +G+D + G + N+VF GND G G+D Y Y I
Sbjct: 3279 IEGGDGNDTLFGGAGDDRLFGQAGNDVFHAQGGNDKIYGGGGVDVAHYSGNRNDYTIVED 3338
Query: 322 ENAIIVYD---ANEHKQDFLSDVERLRFADQCI 351
IIV D QD L V L F D
Sbjct: 3339 NGVIIVTDNRGGAPEGQDTLYGVYTLVFTDGDY 3371
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S G + + + G GND + ++ GND+ G G+D Y
Sbjct: 839 SFRGTAGADPVVASNGDDRISGLEGNDTIYAYEGDDTITGGLGNDLIYGYGGIDVALYDG 898
Query: 312 PSYLYKIYRFENAIIVY---DANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ Y + + V D + + D L VE + FA+Q + V
Sbjct: 899 QASDYTVTVNGDTTTVTDNRDGSPNGTDTLQGVELIEFAEQDAATGPVT 947
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIES 270
S TI +GG D L+ G L+ ++ + + G ++A +
Sbjct: 1607 TLTGSAAGDTINGAGGGDRLE-----GEGGRDSLSGDAGNDSLYGGAGGDSLAGGDENDL 1661
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-- 328
++G SGND + G + ++ +G+D DG +G DT + + I + V
Sbjct: 1662 LLGESGNDSLSGGAGDDEIGAEAGDDQVDGGTGRDTVLVDGNASDFTISVDTLSGAVTLT 1721
Query: 329 ---DANEHKQDFLSDVERLRFADQCIDSVNVK 357
D + D L+ VE +RF D+ +
Sbjct: 1722 DNRDGSPVGSDTLTGVELIRFNDEFVALAGNT 1753
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 15/174 (8%)
Query: 226 GGDDLLDLT----LIGGVKNYIDLNTESWSSIGGYEKNM-TIAQHTVIESVVGSSGNDVV 280
GDDL+D T G + N +S G + ++ T+ +S+ G + D +
Sbjct: 1084 DGDDLVDATAQAGGTAGSLSGGTGNDTLLASGGNSDGSVNTVDGGAGADSITGGAYGDSL 1143
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-----DANEHKQ 335
IG ++V GND +G +GLDT + + R ++ +
Sbjct: 1144 IGGDEDDVIRGDGGNDAVNGGAGLDTILINGNRADFTLVRDSETGVITLTDNRNGAPQGI 1203
Query: 336 DFLSDVERLRFAD-----QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D ++ E LRF D + + L +A+ + + + G DV
Sbjct: 1204 DTITGAEVLRFNDLDVTYEGRSLTGTELVDTLTGSAANDTITALGGNDVINGNG 1257
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 69/205 (33%), Gaps = 13/205 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNT 247
G+ S G++ + I+ GDD +D G + +
Sbjct: 3404 GSNDVSSGDDTIRAGAGNDLVSGLAGADEIHGEDGDDTIDGGTEPDLIYGEAGSDVLNGG 3463
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + G N ++ + ++G GND + G +++ +G+D G+SG DT
Sbjct: 3464 DEDDRLDGGADNDALSGGGGEDYLLGGEGNDNLAGGDQDDLIEAGAGSDTLTGNSGADTL 3523
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ L +N ++ D N D L+ LR + D + + L
Sbjct: 3524 YGEGDHDLISDSDGDNLVLGGDGN----DTLTGTGDLR-GEAGDDVLTGGTATSLSGGEG 3578
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLS 392
+ L + + L+
Sbjct: 3579 NDSLSGSGAMNGGDGDDLITVSALA 3603
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 19/188 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +Y G+D +GG N L S+ G + +
Sbjct: 1790 NDLIEGGDGADLVYGGDGNDT----GLGGEGNDQLLGDRGQDSLDGGTGQDLLWGGVASD 1845
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFY----YAPSYLY 316
++ G G+D + G + N+ GND + G G DT +
Sbjct: 1846 TLTGGEGHDTLYGETGNDSLVGGEGNDYLNDSSGSNTFAGGGGNDTLYGNGTLSGGDGDD 1905
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
++ + DA D +S + L + +L+ + L
Sbjct: 1906 QVTVYGTGY--GDAGNDSVDGVSGDQSLYGGAGDDKLRGMAGADLLDGGDGNDILQGDSA 1963
Query: 377 QDVFESMK 384
QD +++
Sbjct: 1964 QDGDDTIA 1971
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 5/166 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D++ G + + + G + +I T
Sbjct: 2413 FDDSLTGGTAADVIVAAAGNDIVSGGEGGDSLD----GGAGFDVLDGGADHDSIVGGTGE 2468
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+SV+G GNDV+ G + +G+D G +G D A + N +
Sbjct: 2469 DSVLGGDGNDVLDGGDDADTVSGGAGDDTASGGAGHDVVSGGAGTDALD-GGLGNDTVTG 2527
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ D V+ + V + +D ++
Sbjct: 2528 NGTLSGADGNDSVDGSGQVSGDAGNDTVAGSGGVADGGEGDDQVRS 2573
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 56/167 (33%), Gaps = 5/167 (2%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ + T+ S +D + G + I+ N + S + + ++ +SV+G
Sbjct: 1227 TGTELVDTLTGSAANDTI---TALGGNDVINGNGGADS-VDAGAGDDSVTTSYQNDSVLG 1282
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + ++ +N SGND SG DTF + + N + N+
Sbjct: 1283 GDGNDTIAASTGDNNVDGGSGNDSLTAGSGADTFDGGDGADYIHVGSGLNQVTGGLGNDT 1342
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V AD V + L A + L
Sbjct: 1343 IYAT-GSVSGGDGADHINADQAVTFGATLSGGAGNDTLFATQNNTGT 1388
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 47/107 (43%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L GG+ + + L ++ G + + ++++ G G+D + G ++++V +
Sbjct: 3730 SLAGGLGSDVLLGGLGHDAVSGGSDDDRLEGGDGVDTLHGDDGDDNLFGGNSSDVLNGDA 3789
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND DG +G D + + ++ + D ++ D D
Sbjct: 3790 GNDTLDGGAGSDFIWGSEGDDVVSGGAGDDGLAGDDGADNLSDASGD 3836
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 1/97 (1%)
Query: 241 NYIDLN-TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+++DL T + +I G N T+ + + G GND + G N+ G D
Sbjct: 314 SHLDLRGTAAGETIQGNGGNDTLVGLDGNDGLYGYVGNDSIDGGGGNDALSGHQGADTLI 373
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
G +G D + Y + + + D
Sbjct: 374 GGAGDDQIYGGTGDDRYVFTVGDGDDTINVQDYGAGD 410
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 60/206 (29%), Gaps = 44/206 (21%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG------GDDLLDLTL----------------IG 237
G LGN+ + ++ SG G+D + +
Sbjct: 2518 GGLGNDTVTGNGTLSGADGNDSVDGSGQVSGDAGNDTVAGSGGVADGGEGDDQVRSYGGT 2577
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + +++ G + + +++ G G+D +IG ++ SGND+
Sbjct: 2578 GRGGDGNDTLLGYAAHSGQSADEYLDGGIGQDALYGYGGSDTLIGGQNDDTLSGGSGNDI 2637
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE----------------------HKQ 335
G SG D ++ Y + + +
Sbjct: 2638 LYGGSGADRAYFAGNLGSYTVTTDGDNHVSIAGQGYAISYTVDEDGFVVGAAVVTGYDGT 2697
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSI 361
D L VE L F D + + +
Sbjct: 2698 DVLYGVEALVFGDTELALLPYSNVGL 2723
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 40/135 (29%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + +I + + V G DVV G + + +G+D DG +G DT
Sbjct: 956 TLTGGDFGDSIYGYDGDDVVTAGGGRDVVYGGAGADSLDLGAGDDTVDGGAGNDTVLGGD 1015
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYED 370
+ + + D + + D + L A +
Sbjct: 1016 GHDSLS----DTSGVNLIEGGAGNDTIVSGGTVNAGDGLDSVTGTAATTDSLSGGAGNDT 1071
Query: 371 LIQVIGQDVFESMKH 385
L G +
Sbjct: 1072 LRGGSGDTMNGDDGD 1086
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 33/129 (25%), Gaps = 4/129 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N I + V G GND +G N+ G D DG +G D +
Sbjct: 1784 ISAGVGNDLIEGGDGADLVYGGDGNDTGLGGEGNDQLLGDRGQDSLDGGTGQDLLWGGVA 1843
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S E D L E + + S + L
Sbjct: 1844 SDTLT----GGEGHDTLYGETGNDSLVGGEGNDYLNDSSGSNTFAGGGGNDTLYGNGTLS 1899
Query: 373 QVIGQDVFE 381
G D
Sbjct: 1900 GGDGDDQVT 1908
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 9/186 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ L L L I +S+ G + ++ +++ G +GND+V G ++
Sbjct: 3043 NDLSLALDNTTAGEIHTGDADGNSLSGGGLDDSLVGLDGNDTLSGGNGNDIVRGGDGDDS 3102
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSDVER 343
SGNDV G +G D A + ++ ++ N + D LS +
Sbjct: 3103 LLAGSGNDVVYGDAGDDQVAAGAGEDQVRGGAGDDTLLGEGDNDTVYGDGGTDSLSGGD- 3161
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
ADQ + + + L G D E FG + G D + +
Sbjct: 3162 --GADQLFGNGTLSGGEGNDLVRGSGTLYGDGGDDSLELTGSATVFGGA-GNDTVSELWP 3218
Query: 404 YLGSYD 409
Y +
Sbjct: 3219 YFADHA 3224
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 58/189 (30%), Gaps = 33/189 (17%)
Query: 217 PFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVI 268
++ G+D L+ + GG N + S G ++
Sbjct: 1860 TGNDSLVGGEGNDYLNDSSGSNTFAGGGGNDTLYGNGTLSGGDGDDQVTVYGTGYGDAGN 1919
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------------------- 307
+SV G SG+ + G + ++ +G D+ DG G D
Sbjct: 1920 DSVDGVSGDQSLYGGAGDDKLRGMAGADLLDGGDGNDILQGDSAQDGDDTIAGGSGYDVA 1979
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
Y + Y I V D D L+ VE L F D + + I+
Sbjct: 1980 IYSGTASDYTISTVAGVTTVTDNRPGAPEGTDVLTGVELLMFDDGEYELI-APATGIVVT 2038
Query: 365 TASYEDLIQ 373
+D+I
Sbjct: 2039 GTGADDVIP 2047
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 33/89 (37%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + N + + + G G D V G + + +GND G +G D+F +
Sbjct: 509 TLTALDGNDYVYGYEGNDIADGGGGIDTVYGAAGADTITGGTGNDQLYGGAGNDSFVFAE 568
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + A D + D D
Sbjct: 569 GAGNDTLLVQDYAAGDEDVIVIEGDLTID 597
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N T+ + + G G+D++ + N+V + +GND G +G D +
Sbjct: 153 VQGTDGNDTLWGEDGADPIYGYGGHDLIDAGTGNDVIYAGTGNDTVTGGTGDDQIYASTG 212
Query: 313 SYLYKIYRFENAIIVYDANEHKQD 336
S + + +Y ++ D
Sbjct: 213 SDRLVFRVGDGSDTIYVSDADVTD 236
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 11/135 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTES 249
A + GN + + I T+ G+D ++ G + L++ S
Sbjct: 4697 ANIKATGN---GLNNVLTGNDGINTLTGGLGNDSYYVQNSTDNVVENAGEGTDLILSSVS 4753
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S +G + + + I+ G++ + +IGN+ +N G D+ G G D F +
Sbjct: 4754 YSLLGRLVETLQLTGADNID-ATGNNQVNTLIGNAGSNTLNGKGGADILIGGLGADIFLF 4812
Query: 310 YAPSYLYKIYRFENA 324
A S + F +
Sbjct: 4813 EAGSRADTVTDFNGS 4827
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 58/212 (27%), Gaps = 34/212 (16%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--------SIGGYEKNMTI 262
S TI GG+D+++ G + +D S S+ G + N TI
Sbjct: 1233 DTLTGSAANDTITALGGNDVING---NGGADSVDAGAGDDSVTTSYQNDSVLGGDGNDTI 1289
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPS 313
A T +V G SGND + S + F G D G G DT +
Sbjct: 1290 AASTGDNNVDGGSGNDSLTAGSGADTFDGGDGADYIHVGSGLNQVTGGLGNDTIYATGSV 1349
Query: 314 YLYKIYRFENAIIVYD-----ANEHKQDFLSD-------VERLRFADQCIDSVNVKQRSI 361
NA + D L + L D
Sbjct: 1350 SGGDGADHINADQAVTFGATLSGGAGNDTLFATQNNTGTINVLDGGDDHDYIEGGNYADS 1409
Query: 362 LEYTASYEDLIQVIGQDVFESM--KHFYEFGL 391
L + + L G D + G
Sbjct: 1410 LIGGSGNDSLWGYGGADTIAGDDGADYIHAGA 1441
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 2/119 (1%)
Query: 261 TIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +V+ G GND + G + GND+ +G G D Y +
Sbjct: 1755 VVVPGDGVSNVLSGGLGNDSLYGYEGGDQISAGVGNDLIEGGDGAD-LVYGGDGNDTGLG 1813
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N ++ D + D + + L + L + L+ G D
Sbjct: 1814 GEGNDQLLGDRGQDSLDGGTGQDLLWGGVASDTLTGGEGHDTLYGETGNDSLVGGEGND 1872
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 44/158 (27%), Gaps = 5/158 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL + I + S++ G + ++ T + +V ++GND+V G +
Sbjct: 2387 DLVVSSANTGAILTGDNTPSTLTGSAFDDSLTGGTAADVIVAAAGNDIVSGGEGGDSLDG 2446
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHKQDFLSDVERLRF 346
+G DV DG + D+ + D S
Sbjct: 2447 GAGFDVLDGGADHDSIVGGTGEDSVLGGDGNDVLDGGDDADTVSGGAGDDTASGGAGHDV 2506
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + L G D +
Sbjct: 2507 VSGGAGTDALDGGLGNDTVTGNGTLSGADGNDSVDGSG 2544
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 32/89 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G+ N + +T + +GND V G + +GND SG D +
Sbjct: 683 TLTGFGGNDYLYGYTGNDIEDAGAGNDTVYGAEDVDTLIGGTGNDQLYTGSGNDIVRFSE 742
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I+ +A D E D +
Sbjct: 743 GDGNDTIFVQNSAAADSDTIELLGDLTIN 771
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 23/218 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G+N+ G+D + G L + + I
Sbjct: 4394 TGNAGDNVLTGNAGNNLLSGGL------GNDTY-VVQNAGDAVVEALGEGTDAIIASVSY 4446
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T+A V + S + GNS N+ ++G+++ DG +G DT + Y +
Sbjct: 4447 --TLAGRAVEALTLTGSADLTATGNSLANMLSGNAGHNLIDGGAGNDTMGGSGGNDTYVV 4504
Query: 319 YRFENAIIVYDANEHKQDFLSDV----------ERLRFADQCIDSVNVKQRSILEYTASY 368
+ +V + + D + + I+ + + L A+
Sbjct: 4505 NTTGD--VVNENADEGSDTVRAAVTFTLGANLENLVLTGVANINGIGNGLGNSLTGNAAV 4562
Query: 369 EDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
L +G D +++ L EG D+ F S Y
Sbjct: 4563 NVLAGGLGDDSYYVQTLGDDVLEILGEGTDVVFASVSY 4600
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 11/153 (7%)
Query: 238 GVKNYIDLNTESWS----------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
ID+ ++ + G N + +++ G GND +IG+ +
Sbjct: 3991 FADQTIDVTASNFGIIIDGSAIADNKTGTSGNDFLRGFGGQDTLTGLDGNDTLIGDDDAD 4050
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+G DV +G S D + + Y + + I+ D LSD A
Sbjct: 4051 QLSGGNGEDVLNGGSAADNLAGGSGNDTYAVDDTADLIVESDGGGTDL-VLSDAADYVLA 4109
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + I + +LI +
Sbjct: 4110 DHVENLSLQGPGHINGTGNALNNLITGNDGNNL 4142
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 29/80 (36%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ + + V G+DVV+G AN+V G D G SG DT +
Sbjct: 2057 LTGNDTVDAGSGGDRVEAGGGHDVVLGRLANDVLEGGYGADTLIGGSGDDTLLGDTGHDV 2116
Query: 316 YKIYRFENAIIVYDANEHKQ 335
DA+ +
Sbjct: 2117 LYGSDGAAGGYSDDADGNTD 2136
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 36/131 (27%), Gaps = 4/131 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N ++ + + + GND++ G ++ + GND G G D
Sbjct: 1766 LSGGLGNDSLYGYEGGDQISAGVGNDLIEGGDGADLVYGGDGNDTGLGGEGNDQLLGDRG 1825
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D L+ E + ++ +Y
Sbjct: 1826 QDSLD----GGTGQDLLWGGVASDTLTGGEGHDTLYGETGNDSLVGGEGNDYLNDSSGSN 1881
Query: 373 QVIGQDVFESM 383
G +++
Sbjct: 1882 TFAGGGGNDTL 1892
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
N T+A + + + G G+D + GN N+V + GND G G D +
Sbjct: 2740 NDTMAGNGGHDRLTGDQGDDSLSGNDGNDVLYGDGGNDNLAGGEGQDHLYAG 2791
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 5/148 (3%)
Query: 235 LIGGVKNYIDLNTES----WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
G ID T + ++ + + ++ +++++ GS+ ND + N+V
Sbjct: 1195 NRNGAPQGIDTITGAEVLRFNDLDVTYEGRSLTGTELVDTLTGSAANDTITALGGNDVIN 1254
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ G D D +G D+ + + N I ++ D S + L
Sbjct: 1255 GNGGADSVDAGAGDDSVTTSYQNDSV-LGGDGNDTIAASTGDNNVDGGSGNDSLTAGSGA 1313
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + +G D
Sbjct: 1314 DTFDGGDGADYIHVGSGLNQVTGGLGND 1341
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 5/142 (3%)
Query: 251 SSIGGYEKNMT--IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S + + N+ + +++ G G D + G +++ +GNDV +G DT
Sbjct: 140 SDLELFGGNIGALVQGTDGNDTLWGEDGADPIYGYGGHDLIDAGTGNDVIYAGTGNDTVT 199
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ ++ + ++SD + D + + +
Sbjct: 200 GGTGDDQIYASTGSDRLVFRVGDGSDTIYVSDADV---TDADVIEILGNLTLTNVWFQRT 256
Query: 369 EDLIQVIGQDVFESMKHFYEFG 390
+ G ++ + H+ + G
Sbjct: 257 QSYHPSYGYGYYDLVIHYGDQG 278
Score = 44.7 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 5/135 (3%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+S +++ GN+ NN+ +G D F G G DT+ S + V +
Sbjct: 4622 GNSLANMLNGNAGNNLLDGGAGYDTFAGGDGNDTYIVNLSSETVTEGLNQGTDTVLSSAT 4681
Query: 333 HKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEF 389
+E L I + ++L L +G D ++
Sbjct: 4682 FSLGD--HLENLTLTGTANIKATGNGLNNVLTGNDGINTLTGGLGNDSYYVQNSTDNVVE 4739
Query: 390 GLSEGRDITFDSYLY 404
EG D+ S Y
Sbjct: 4740 NAGEGTDLILSSVSY 4754
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 53/177 (29%), Gaps = 30/177 (16%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI------ 268
T+Y GGDD +D G YI N S++ + ++ +A T
Sbjct: 1524 GGSGNDTLYGFGGDDTIDG-GSGIDIVYISGNRSSFTITETEDGDVIVAGSTTTDYLTGI 1582
Query: 269 -----------------------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E++ GS+ D + G + G D G +G D
Sbjct: 1583 EVIRFNDQDVSYQGLTLNGGVNGETLTGSAAGDTINGAGGGDRLEGEGGRDSLSGDAGND 1642
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + A + ++ N+ D E A + ++L
Sbjct: 1643 SLYGGAGGDSLAGGDENDLLLGESGNDSLSGGAGDDEIGAEAGDDQVDGGTGRDTVL 1699
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 25/62 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I +++ G+ G+D + G+ ++ + GNDV G G D
Sbjct: 2725 LNGTSGDDIIIGDIGNDTMAGNGGHDRLTGDQGDDSLSGNDGNDVLYGDGGNDNLAGGEG 2784
Query: 313 SY 314
Sbjct: 2785 QD 2786
Score = 41.3 bits (95), Expect = 0.52, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+SGND G ++ ++G+D+ G +G D F + I A D
Sbjct: 8 GTSGNDNFGGTVEDDTIRGNTGDDILGGGAGNDVFVFEEGDGNDLIDVQNFAAADIDT 65
Score = 40.9 bits (94), Expect = 0.72, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 24/120 (20%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G+D +D G + G N + ++++G SG+D ++G+
Sbjct: 2056 DLTGNDTVDAGSGGDRVEA----GGGHDVVLGRLANDVLEGGYGADTLIGGSGDDTLLGD 2111
Query: 284 SANNVFFESSGN--------------------DVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++V + S G D DG G DT + N
Sbjct: 2112 TGHDVLYGSDGAAGGYSDDADGNTDGHPDFDRDSLDGGQGNDTLIGGNGEDRLSDWVGNN 2171
Score = 40.5 bits (93), Expect = 0.83, Method: Composition-based stats.
Identities = 21/188 (11%), Positives = 50/188 (26%), Gaps = 14/188 (7%)
Query: 204 NNIYKIEVQQKDSPFI--QTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ +Y T+ G+D + D + ++L +
Sbjct: 982 DVVYGGAGADSLDLGAGDDTVDGGAGNDTVLGGDGHDSLSDTSGVNLIEGGAGNDTIVSG 1041
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD----TFFYYAPSY 314
A + ++ D + G + N+ SG D +G G D T +
Sbjct: 1042 GTVNAGDGLDSVTGTAATTDSLSGGAGNDTLRGGSG-DTMNGDDGDDLVDATAQAGGTAG 1100
Query: 315 LYKIYRFENAIIVYDANEHK----QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++ N D + + + + + ++ +
Sbjct: 1101 SLSGGTGNDTLLASGGNSDGSVNTVDGGAGADSITGGAYGDSLIGGDEDDVIRGDGGNDA 1160
Query: 371 LIQVIGQD 378
+ G D
Sbjct: 1161 VNGGAGLD 1168
Score = 40.1 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 20/226 (8%)
Query: 204 NNIYKIEVQQKDSPF--------IQTIYDSGGDDLLDLTLIGGVKNYID-LNTESWSSIG 254
+ +Y S T+ G+DL+ + D L +++
Sbjct: 3146 DTVYGDGGTDSLSGGDGADQLFGNGTLSGGEGNDLVRGSGTLYGDGGDDSLELTGSATVF 3205
Query: 255 GYEKNMTIAQ--HTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---- 307
G N T+++ + + +G+DVV N+ GND G D+
Sbjct: 3206 GGAGNDTVSELWPYFADHAISGEAGDDVVTSGYGNDTLSGGIGNDTLGGGDNDDSLAGDD 3265
Query: 308 ---FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ +I + ++ + F + A D + + +
Sbjct: 3266 GDDQLDGGNSYDRIEGGDGNDTLFGGAGDDRLFGQAGNDVFHAQGGNDKIYGGGGVDVAH 3325
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + ++ + + G EG+D + Y + + D
Sbjct: 3326 YSGNRNDYTIVEDNGVIIVTD-NRGGAPEGQDTLYGVYTLVFTDGD 3370
>gi|218529941|ref|YP_002420757.1| heme peroxidase [Methylobacterium chloromethanicum CM4]
gi|218522244|gb|ACK82829.1| Animal heme peroxidase [Methylobacterium chloromethanicum CM4]
Length = 3587
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 52/170 (30%), Gaps = 27/170 (15%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV-------- 288
N I I G N I + + V G G+D ++GN +
Sbjct: 1876 SASPNVILGRDGDD-DIEGEVGNDAIYAGSGDDRVDGGEGDDTLLGNDGADTLIGRTGNN 1934
Query: 289 ----------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV----YDANEHK 334
GND G +G DT Y P Y R +V A
Sbjct: 1935 TLDGGNDDDQLSGGHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDNLGAEGDG 1994
Query: 335 QDFLSDVERLRFADQ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L+ +E+++ + + + I+ TA L G D+
Sbjct: 1995 VDTLTTIEQIQMGNDLTPYALVANGTAAVDIVVGTAGNNTLSGGAGNDLV 2044
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 7/156 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I DSG D D L G N + N+ + G I V G+D
Sbjct: 1357 DIITDSG--DTGDF-LKGEDGNDVIANSNGIDILMGGRGKDAIFVGVDATEVFAGEGDDF 1413
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
VIG ++ + G+D +G G DT + + ++ +EH D S
Sbjct: 1414 VIGGDDADLLMGNEGDDWMEGGGGFDTTAGDNSELFFNSAIKGHDVMFAGGDEHDFDGES 1473
Query: 340 DVERLRFADQCIDSVNVKQRSILEY----TASYEDL 371
+ + + + + + Y A+ D+
Sbjct: 1474 GDDIMVQGESVMRNEGMFGFDWAIYKGNQIAANADM 1509
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 6/114 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVV 272
+ TI GDD + L GG + + + + + E + + V+
Sbjct: 3301 NGTAGADTILGLDGDDNI---LAGGGADVV--RAGAGNDFVDAGEGRDVVFAGDGDDDVL 3355
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G D+V G+ N+ +GND+ +G DT L+ +
Sbjct: 3356 SGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLFVAETGDGDDT 3409
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 14/187 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++++ E D + G G D LD++ I I +N + + G +
Sbjct: 3395 GDDLFVAETGDGDDTYWGDEMGGGLGSDTLDMSAITAN---IAVNLGTGLAGRGSATSTQ 3451
Query: 262 IAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +E+VV SGND + + A NV G+D + S A + I
Sbjct: 3452 SGRDVLWGVENVVTGSGNDDITASDAANVMDGGEGSDTYRFGS-------AAAANGDTIE 3504
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
F + + L+ + A V Q + + T D + V G
Sbjct: 3505 GFRPGDKIDLSAIDADAGLAGNQAFTLA-TGAAFTGVGQLLVTQETRDDGDYVVVQGNTA 3563
Query: 380 FESMKHF 386
++ F
Sbjct: 3564 GDASPEF 3570
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + ++++ G+D + G++ ++ +G D+ +G +G D + +
Sbjct: 1312 VLVGGTDGNDTIITDFGDDGIWGDAGDDRIEAGAGVDLVNGGAGDDIITDSGDTGDFLKG 1371
Query: 320 RFENAIIVYDANEHKQDFLSD 340
N +I AN + D L
Sbjct: 1372 EDGNDVI---ANSNGIDILMG 1389
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 2/111 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + ++++G G+D ++ +V +GND D G D F A
Sbjct: 3291 IAGGANGDVLNGTAGADTILGLDGDDNILAGGGADVVRAGAGNDFVDAGEGRDVVF--AG 3348
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ A +VY + + L A D+V + L
Sbjct: 3349 DGDDDVLSGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLF 3399
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV-------VIGNSANNVFFESSGNDVF 298
N E S + + + G++G+D+ + G N+ +GND+
Sbjct: 2219 NPEELFSAPTGIVGDSFTGTALNRTFNGTAGDDIANGADTALFGIQPNDTMNGGAGNDIL 2278
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAII 326
+G G DTF + ++
Sbjct: 2279 NGRGGNDTFIQVSTDGRDRVDGGAGTDT 2306
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
LN + + I G + + I + V +GND V +V F G+D G
Sbjct: 3300 LNGTAGADTILGLDGDDNILAGGGADVVRAGAGNDFVDAGEGRDVVFAGDGDDDVLSGGG 3359
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
D + + + + +D + E
Sbjct: 3360 ADMVYGDGGNDRILAGAGNDLVT----AGAGRDTVIGGE 3394
Score = 44.7 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 22/64 (34%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G++ D+V+G + NN +GND+ +G D + +
Sbjct: 2017 ANGTAAVDIVVGTAGNNTLSGGAGNDLVFAGAGNDNVLWRTGDGRDFVDGGAGTDSFRIM 2076
Query: 331 NEHK 334
N
Sbjct: 2077 NGTG 2080
Score = 44.0 bits (102), Expect = 0.089, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 11/127 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N + Q I+S G++ + + G+++ NV G+D +G G D + +
Sbjct: 1845 TSTVAGNTGLQQTASIQSAFVGTAAAEDITGSASPNVILGRDGDDDIEGEVGNDAIYAGS 1904
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ ++ D L R + +D N + L + L
Sbjct: 1905 GDDRVDGGEGDDTLL----GNDGADTLIG----RTGNNTLDGGNDDDQ--LSGGHGNDRL 1954
Query: 372 IQVIGQD 378
I G D
Sbjct: 1955 IGGAGTD 1961
Score = 40.9 bits (94), Expect = 0.81, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 10/106 (9%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G + +V ++G D G G D + ++ A D
Sbjct: 3290 VIAGGANGDVLNGTAGADTILGLDGDDNILAGGGAD----------VVRAGAGNDFVDAG 3339
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D D ++ ++ + ++ G D+ +
Sbjct: 3340 EGRDVVFAGDGDDDVLSGGGADMVYGDGGNDRILAGAGNDLVTAGA 3385
>gi|325137633|gb|EGC60210.1| Iron-regulated protein frpC [Neisseria meningitidis ES14902]
Length = 1829
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1353 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1410
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 1411 GSTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 1448
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1449 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGSSGSDTYVF-- 1506
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1507 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1554
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 953 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1010
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1011 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1048
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1049 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1106
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1107 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1154
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1153 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1210
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1211 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1248
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1249 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1306
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1307 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1354
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1553 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1610
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1611 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1648
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1649 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1706
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1707 GKGFGQDTVYN 1717
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 860 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 919
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 920 YATGRKDIIRFTDGITAD 937
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1613 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 1672
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1673 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1732
Query: 390 GLS 392
+
Sbjct: 1733 KAA 1735
>gi|157423149|gb|AAI53751.1| LOC100127631 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 18/128 (14%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W + Y+ + + + A+ WS V LTF+E + +DI
Sbjct: 113 GRWRKKNLTYR---IYNYTPDMSL----AAARSAILAGFKYWSDVTPLTFKEVTRGRADI 165
Query: 80 KFISSNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEIG 129
+ G C+ +D ++FD+ ++W G +G L A HE+G
Sbjct: 166 RISFHRRGNGCSRPFDGPGKVLAHADIPELGTVHFDEDELWTEGTYEGVNLRIIAAHELG 225
Query: 130 HALGLMHP 137
HALGL H
Sbjct: 226 HALGLGHS 233
>gi|148232353|ref|NP_001087105.1| matrix metallopeptidase 24 (membrane-inserted) [Xenopus laevis]
gi|50414961|gb|AAH77870.1| Mmp24-prov protein [Xenopus laevis]
Length = 576
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 61/202 (30%), Gaps = 56/202 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W + I + T + E R A W V L F+E
Sbjct: 110 WQHKDITFCIQNYTPKIGEYST-------HEAIRRAFKVWESVTPLRFQEVRYVDIQDGY 162
Query: 74 SIHSDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
+ H+DI G++ + + +FD A+ W R +G
Sbjct: 163 TKHADIMLFFAEGFHGDSTPFDGEGGFLAHAYFPGTGIGGDTHFDSAEPWTARNEDLEGN 222
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HE+GHALGL H + +M+ F +
Sbjct: 223 DLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQWMDTTNFQ-- 261
Query: 179 YCATPMVSDIVAVQKIYGAPKG 200
D +Q++YG G
Sbjct: 262 ----LPDDDRRGIQQLYGPNHG 279
>gi|56972358|gb|AAH88120.1| Matrix metallopeptidase 12 [Rattus norvegicus]
Length = 465
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 69/197 (35%), Gaps = 51/197 (25%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W ++ Y+ T D+ + + A WS V L F + +DI
Sbjct: 103 SRWMKRYLTYRIYNYTPDMKRADVDY-------IFQKAFQVWSDVTPLRFRKIHKGEADI 155
Query: 80 K--FISSNNGYVC-----TPRYDSRYFM------EINFDKADVWRYGIGKGTILSHNALH 126
F ++G ++ + +FD+A+ W +GT L A+H
Sbjct: 156 TILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 214
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV- 185
E+GH+LGL H + S+M + + T +
Sbjct: 215 ELGHSLGLPHSNNPK-------------------SIM--------YPTYRYLHPNTFRLS 247
Query: 186 -SDIVAVQKIYGAPKGS 201
DI ++Q +YGAP +
Sbjct: 248 ADDIHSIQSLYGAPVKN 264
>gi|148692668|gb|EDL24615.1| matrix metallopeptidase 19, isoform CRA_c [Mus musculus]
Length = 378
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 62/189 (32%), Gaps = 47/189 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEETSIH-SD 78
+W + ++ + + L+ P + A WS V LTF E +D
Sbjct: 84 GHWRKKNLTFRIFNVP--------STLSLPRVRAALHQAFKYWSSVAPLTFREVKAGWAD 135
Query: 79 IKFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHE 127
I+ C+ +D I+FDK ++W G +G L A HE
Sbjct: 136 IRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRIIAAHE 195
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GHALGL H Y + + A + D
Sbjct: 196 VGHALGLGHSR--------------------------YTQALMAPVYAGYQPFFKLHPDD 229
Query: 188 IVAVQKIYG 196
+ +Q +YG
Sbjct: 230 VAGIQALYG 238
>gi|115733038|ref|XP_790682.2| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
gi|115935155|ref|XP_001197335.1| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
Length = 522
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 62/167 (37%), Gaps = 43/167 (25%)
Query: 53 EVARWALGEWSKVVDLTFEET----SIHSDIKFISSNN----------GYVCTPRYDSRY 98
E+AR A WS V LTF E S DI+F+S + G V P + Y
Sbjct: 164 EIAR-AFQLWSNVTPLTFREVNRRASADIDIRFVSGFHQDDYPFYGAMGVVGHPMVEEMY 222
Query: 99 --FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ I+ D + + + G L LH+IGHALGL H +
Sbjct: 223 EHVVRIDVDADEQFTFDRADGINLLQVMLHQIGHALGLGHSSDH---------------- 266
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
S+MS + + T +D+ +Q IYG P
Sbjct: 267 ---ISIMSPCVKP-------YIPNFTLTETDVTGIQSIYGLPNSPTD 303
>gi|114640083|ref|XP_001153208.1| PREDICTED: matrix metalloproteinase-20 [Pan troglodytes]
Length = 483
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 71/216 (32%), Gaps = 51/216 (23%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L + W + Y+ T S ++ + AL W
Sbjct: 97 KPRCGVPDVANYRLFPGEPKWKKNILTYRISKYTPSMSSVEVDK-------AVEMALQAW 149
Query: 63 SKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKAD 108
S V L+F S +DI N + + +D + +FD A+
Sbjct: 150 SSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAE 209
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W G G L A HE GHALGL H + YP Y N Y
Sbjct: 210 KWTMGTN-GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYG------------- 255
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
F D+ +Q +YG K LG
Sbjct: 256 ---------FHLP----KDDVKGIQALYGPRKAFLG 278
>gi|15606363|ref|NP_213742.1| hemolysin [Aquifex aeolicus VF5]
gi|2983562|gb|AAC07135.1| hemolysin [Aquifex aeolicus VF5]
Length = 398
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 3/167 (1%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-NTESWSSIGGYEKNMT 261
G + K++ + D+ ++ + G I+L N I G N T
Sbjct: 98 GTDTIKVDTTGGAVTYAPAS-DNNLKNVEKIVATGSNGATINLSNQTEGFEIVGSAGNDT 156
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR- 320
I ++ G +GND + G + N+ +GND+ G G DT + ++ +
Sbjct: 157 ITGGAGNNTIAGGAGNDTIAGGAGNDTLTGGAGNDIITGGKGQDTLTGGNGADVFGLDAP 216
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
F + D + + D ++ A+ + Y ++
Sbjct: 217 FAAIDKITDFDTNTTDEKIAIDFKAGANLTKGAFGNVNSLGSGYISA 263
>gi|308048168|ref|YP_003911734.1| N-acetylgalactosaminyl-proteoglycan3-beta-glucur onosyltransferase
[Ferrimonas balearica DSM 9799]
gi|307630358|gb|ADN74660.1| N-acetylgalactosaminyl-proteoglycan3-beta-glucur onosyltransferase
[Ferrimonas balearica DSM 9799]
Length = 722
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 12/83 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL Y D+ HY+ G K GR+P F Y++ +ED+ +
Sbjct: 14 FDIDWYLKQYPDVN----LSGLPPVEHYLKFGWKIGRDPSPHFSTQGYLSHYEDVRQSGL 69
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF 480
+ HF +G EGR
Sbjct: 70 NP-------LAHFIRYGINEGRI 85
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
N I Y Y D+ ++H+ +FG GRD + F + YL Y+D+R
Sbjct: 10 NSGLFDIDWYLKQYPDV----NLSGLPPVEHYLKFGWKIGRDPSPHFSTQGYLSHYEDVR 65
Query: 413 NVFGSDRGAAARHYITHGVKEGR 435
H+I +G+ EGR
Sbjct: 66 Q----SGLNPLAHFIRYGINEGR 84
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLY 572
+ E +N F Y+ + D+ + +H+ FG++ GR S F+ Y
Sbjct: 5 ISEIKNSGLFDIDWYLKQYPDVNLSGLPP-------VEHYLKFGWKIGRDPSPHFSTQGY 57
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
L+ Y+D+ H+I +G+ EGR +Q + L K RD
Sbjct: 58 LSHYEDVR----QSGLNPLAHFIRYGINEGRIKAGVKVQKPKIEALPIKPRDTG 107
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL Y D+ HY+ G K GR+P F Y++ +ED+ +
Sbjct: 14 FDIDWYLKQYPDVNLSG----LPPVEHYLKFGWKIGRDPSPHFSTQGYLSHYEDVRQSGL 69
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
+ HF +G EGR
Sbjct: 70 NP-------LAHFIRYGINEGR 84
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLG 490
E +N F Y+ + D+ N P +H+ FG + GR + F + YL
Sbjct: 7 EIKNSGLFDIDWYLKQYPDV-NLSGLPP------VEHYLKFGWKIGRDPSPHFSTQGYLS 59
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGR 519
Y+D+R H+I +G+ EGR
Sbjct: 60 HYEDVRQSG----LNPLAHFIRYGINEGR 84
>gi|283464606|gb|ADB22829.1| GtxA [Gallibacterium anatis]
Length = 2026
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 101/270 (37%), Gaps = 29/270 (10%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN------IYKIEVQ----QK 214
YF+ Q+ D +G ++ K+YG N IY E Q
Sbjct: 1653 YFLAQNGN-DLVYGKEGDDIIFGGAGDDKLYGETGNDTLNGGLGKDLIYGGEGNDTIIQD 1711
Query: 215 DSPFIQTIYDSGGDDLLDLT----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
D+ TI+ G D LDL G+ DL +E K IE+
Sbjct: 1712 DALSSDTIFGDEGIDTLDLRHLVINDEGLGVVADLQSE------KLYKGTIFDHIYDIEN 1765
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP-SYLYKIYRFENAIIVYD 329
++G+SGND +IGN +N+ + G+D+ +G SG D + + LY + ++ +
Sbjct: 1766 IIGTSGNDNLIGNHKDNILIGNDGDDILEGYSGNDVLAGGSGINKLYGGQGADIYLLSTN 1825
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
A + D + + ++ K + +D IG+ + E F F
Sbjct: 1826 ATNYIFDLTKNNLAKLENSEDLNLQFTKDSDDNVTLSFNKDGNT-IGKTIIEKSSQFGTF 1884
Query: 390 GLSEGR--DITFDSYLYL----GSYDDLRN 413
+ +G D+ + Y+ S DL
Sbjct: 1885 SIGDGYYLDLNDGKFKYILSGESSNADLAQ 1914
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + V G G+D++ G + ++ + +GND +G G D +
Sbjct: 1645 MYGSKGNDYFLAQNGNDLVYGKEGDDIIFGGAGDDKLYGETGNDTLNGGLGKDLIYGGEG 1704
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ I + + + D L D+ L D+ + V Q L ++
Sbjct: 1705 ND--TIIQDDALSSDTIFGDEGIDTL-DLRHLVINDEGLGVVADLQSEKLYKGTIFD 1758
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 8/124 (6%)
Query: 252 SIGGYEKNM-TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
N+ I+ + + GS GND + + N++ + G+D+ G +G D +
Sbjct: 1625 DASDMLYNVEVISASDYDDVMYGSKGNDYFLAQNGNDLVYGKEGDDIIFGGAGDDKLYGE 1684
Query: 311 APSYL-------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ IY E + + D + E + D +N + ++
Sbjct: 1685 TGNDTLNGGLGKDLIYGGEGNDTIIQDDALSSDTIFGDEGIDTLDLRHLVINDEGLGVVA 1744
Query: 364 YTAS 367
S
Sbjct: 1745 DLQS 1748
>gi|113474282|ref|YP_720343.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110165330|gb|ABG49870.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 709
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 11/155 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IG 254
G + G +I + G D L+ + GG +N + +
Sbjct: 54 GKDTLNGGGGNDQINGGGSNDKLN----GGAGKDTLNGS--GGNDQ---INGGGSNDKLN 104
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G T+ ++++G SGND + G + N+V + GNDV G+ G D A
Sbjct: 105 GGAGKDTLNGGNAQDNLIGGSGNDFLDGGNGNDVLTGNDGNDVLVGNFGKDILTGGAGDD 164
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
++ + +A+ A + DF + + +
Sbjct: 165 VF-FLKQNSAVNNNSAADMITDFQPNFDTIGLDSG 198
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 53/190 (27%), Gaps = 11/190 (5%)
Query: 233 LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ G +L + I G N I + + G +G D + G + +
Sbjct: 1 MAFYQGTNKKDNLKGTAKKDTINGKGGNDKIDGRGGNDKLNGGAGKDTLNGGAGKDTLNG 60
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND +G D A N I + K + + + L +
Sbjct: 61 GGGNDQINGGGSNDKLNGGAGKDTLN-GSGGNDQINGGGSNDKLNGGAGKDTLNGGNAQD 119
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESM--KHFYEFGLSEGRDITFDSYLYLGSYD 409
+ + L+ + L G DV K G D +L
Sbjct: 120 NLIGGSGNDFLDGGNGNDVLTGNDGNDVLVGNFGKDILTGGAG-------DDVFFLKQNS 172
Query: 410 DLRNVFGSDR 419
+ N +D
Sbjct: 173 AVNNNSAADM 182
>gi|325139764|gb|EGC62297.1| iron-regulated protein FrpA [Neisseria meningitidis CU385]
Length = 1149
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 826 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 883
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 884 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 939
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 940 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKD 999
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1000 IIRFTDGITAD 1010
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 733 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 792
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 793 YATGRKDIIRFTDGITAD 810
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 26/66 (39%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S +++ G + + + + G +GND + + N+ GND G +G D
Sbjct: 1083 SGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALN 1142
Query: 309 YYAPSY 314
+
Sbjct: 1143 GGEGND 1148
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 2/120 (1%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 886 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 945
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D V D K F
Sbjct: 946 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQD--AVYNYDYATGRKDIIRF 1003
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 31/63 (49%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ Y+ T+ + + G+ G+D++ G++ N+ + +GND +G G D + Y
Sbjct: 1078 LYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNG 1137
Query: 313 SYL 315
+
Sbjct: 1138 NDA 1140
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + + + +S+ +GND + G N+ + +GND +G G D
Sbjct: 1096 LYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDH 1149
>gi|209525891|ref|ZP_03274426.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209493700|gb|EDZ94020.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 1168
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 8/160 (5%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D L + L + + G N T+ +++VG +GNDV+ GN +
Sbjct: 972 GTDDPDFILGSASDETL-LGFQGNDFLQGTAGNNTLFGGQGNDTLVGGNGNDVLFGNKDD 1030
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ F GND G G DT A + + V D L E
Sbjct: 1031 DILFGQGGNDTLFGGQGNDTLIGGAGNNE---LWGDKGNDVLYGGMRGIDTLRGGE---- 1083
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ V S++ +DLI + G +
Sbjct: 1084 GNDTFILVPGDGYSVVADFQMNQDLIILPGTPANYEIGDL 1123
>gi|218531769|ref|YP_002422585.1| hypothetical protein Mchl_3845 [Methylobacterium chloromethanicum
CM4]
gi|218524072|gb|ACK84657.1| hypothetical protein Mchl_3845 [Methylobacterium chloromethanicum
CM4]
Length = 355
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD YL +RN G + +HY+ HG ++G +P A F + Y+A++ D+
Sbjct: 20 PGFDEAYYLEHNPSVRNFTG----SPLQHYLQHGWRDGCDPSAGFSSSGYLAANPDVTAN 75
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 76 DLNP-------LAHFLKHGLAEGR 92
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
E FD YL +RN G + +HY+ HG ++G +P A F + Y+A++ D
Sbjct: 16 ECHMPGFDEAYYLEHNPSVRNFTG----SPLQHYLQHGWRDGCDPSAGFSSSGYLAANPD 71
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ + HF G EGR
Sbjct: 72 VTANDLNP-------LAHFLKHGLAEGR 92
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
++ Y + G ++H+ + G +G D + F S YL + D
Sbjct: 16 ECHMPGFDEAYYLEHNPSVRNFTG----SPLQHYLQHGWRDGCDPSAGFSSSGYLAANPD 71
Query: 411 LRNVFGSDRGAAARHYITHGVKEGR 435
+ ++ H++ HG+ EGR
Sbjct: 72 VT----ANDLNPLAHFLKHGLAEGR 92
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLW 580
F Y+ + + N H+ G+ +G S F+ YL + D+
Sbjct: 21 GFDEAYYLEHNPSVRNFTGSP-------LQHYLQHGWRDGCDPSAGFSSSGYLAANPDVT 73
Query: 581 NVFGSDRSAAAQHYITHGMKEGR 603
++ H++ HG+ EGR
Sbjct: 74 ----ANDLNPLAHFLKHGLAEGR 92
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG--RALGISGMQFKSV 615
F+ YL + N GS QHY+ HG ++G + G S + +
Sbjct: 20 PGFDEAYYLEHNPSVRNFTGS----PLQHYLQHGWRDGCDPSAGFSSSGYLAA 68
>gi|302875309|ref|YP_003843942.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578166|gb|ADL52178.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 2147
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 19/216 (8%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
DI ++ + ++ Q S F I GGDD + G N L
Sbjct: 1117 WDIEKTRQ---VAMATTIEGTEGRDIIQGYSDFNNKIVAKGGDD-----EVTGSDNNDTL 1168
Query: 246 NTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + I G N T+ +S++G +GND ++G N++ +G+D +G G
Sbjct: 1169 DGGAGIDILNGKGGNDTLIGGMGNDSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGGIGN 1228
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT + +YK + I+ ++N E F +D +K+ +
Sbjct: 1229 DTLIGGYGTDIYKFKKGFGQDIIINSN----------ETNAFELDRLDMDGIKEEEVKAT 1278
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ ++ + + ++ ++ +G S I FD
Sbjct: 1279 REGQDLVLIIKETEESIRIQDYFTYGSSAISKIKFD 1314
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 17/174 (9%)
Query: 216 SPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
S F I GDD + + GG N I I + ++ I++
Sbjct: 941 SDFNNIIKGYDGDDNITGSNYKDELYGGNGNDI---------IVAGVGDDSLEGGAGIDN 991
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++ G N+ GND+ G SG D + Y + I+ ++
Sbjct: 992 LDGGTGNDLLNGGYDNDTLKGGDGNDILIGGSGYDILEGGNGNDTYIFKQGFRQDIINNS 1051
Query: 331 NEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D+ E L+ +D + + T Y + D
Sbjct: 1052 NTSNDITEVDILKMEGLKESDVRVSRQGQNLILGIRETGEYVKVQGYFNYDSSA 1105
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 15/160 (9%)
Query: 186 SDIVAVQKIYGAPKGSLG----NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
D+ V + YG G ++I+ SGG++ D +L G N
Sbjct: 1544 DDLDNVIQGYGGADIITGGSNKDSIFGGSGNDNIHGNDGIDILSGGNE--DDSLYGDDGN 1601
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I + G N T+ +S+ G+ G+D + G ++ GND+ DG
Sbjct: 1602 DI---------LKGELGNDTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVSGIGNDILDGG 1652
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G D + Y I+ + N + D+
Sbjct: 1653 LGNDYLVGGLGNDTYTFQENYGQDIINNLNVGANNSEVDI 1692
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 2/154 (1%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+D V++Q + +L N I+ V+ + + G D +D + I L
Sbjct: 1720 NDSVSIQGYFNYDSAALSNIIFADNVKWDVTKIKEMPITVEGTDNVDTIIGFSELKNIVL 1779
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I G T+ + + G +G+D++ G ++ GND+ DG G D
Sbjct: 1780 GKGGTDIITGSSNADTLDGGLGNDMLAGGAGDDILKGGDGDDSLTGGIGNDILDGEQGND 1839
Query: 306 TFFYYAPSYLYKI--YRFENAIIVYDANEHKQDF 337
+ Y E I YD+ + D
Sbjct: 1840 HLIGSYGNDTYIFRKGYGEERIENYDSGTNSSDI 1873
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + +D + N I +I G + T +++ GSSG+D + G + +
Sbjct: 363 GTEEIDKIVAFSNFNTIVNGKGGEDTISGNNGDDVFYGGTGNDTLSGSSGSDTLRGENDD 422
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVER 343
++ G+D G +G D + + + L E + D DFL V+
Sbjct: 423 DILLGGIGDDELYGGAGNDKLYGESVNPL----GTETGNDILDGGT-GNDFLYGGYGVDT 477
Query: 344 LRF 346
F
Sbjct: 478 YIF 480
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + +D + N I +I G + T +++ GSSG+D + G + +
Sbjct: 572 GTEEIDKIVAFSNFNTIVNGKGGEDTISGNNGDDVFYGGTGNDTLSGSSGSDTLRGENDD 631
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVER 343
++ G+D G +G D + + + L E + D DFL V+
Sbjct: 632 DILLGGIGDDELYGGAGNDKLYGESVNPL----GTETGNDILDGGT-GNDFLYGGYGVDT 686
Query: 344 LRF 346
F
Sbjct: 687 YIF 689
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 13/126 (10%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
++ S + GG D++ + + G N +A
Sbjct: 1762 TDNVDTIIGFSELKNIVLGKGGTDIITGSSNADT-------------LDGGLGNDMLAGG 1808
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G G+D + G N++ GND GS G DT+ + +I +++
Sbjct: 1809 AGDDILKGGDGDDSLTGGIGNDILDGEQGNDHLIGSYGNDTYIFRKGYGEERIENYDSGT 1868
Query: 326 IVYDAN 331
D +
Sbjct: 1869 NSSDID 1874
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 8/91 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS--------GNDVFDGSSGL 304
I G N + + + G GND + G + N+ + S GND+ DG +G
Sbjct: 198 ITGINGNDLLYGGDGDDKLSGGLGNDDLYGGAGNDKLYGESVNPSGTEIGNDILDGGTGN 257
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D + Y R + ++
Sbjct: 258 DFLYGGYGVDTYIFKRGYGEDTINNSVPSGS 288
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 23/131 (17%)
Query: 219 IQTIYDS-GGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
TI + GG+D + D GG N L+ S S E + I ++
Sbjct: 376 FNTIVNGKGGEDTISGNNGDDVFYGGTGND-TLSGSSGSDTLRGENDDDI--------LL 426
Query: 273 GSSGNDVVIGNSANNVFFESS--------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G G+D + G + N+ + S GND+ DG +G D + Y R
Sbjct: 427 GGIGDDELYGGAGNDKLYGESVNPLGTETGNDILDGGTGNDFLYGGYGVDTYIFKRGYGE 486
Query: 325 IIVYDANEHKQ 335
+ ++
Sbjct: 487 DTINNSVPSGS 497
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 23/131 (17%)
Query: 219 IQTIYDS-GGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
TI + GG+D + D GG N L+ S S E + I ++
Sbjct: 585 FNTIVNGKGGEDTISGNNGDDVFYGGTGND-TLSGSSGSDTLRGENDDDI--------LL 635
Query: 273 GSSGNDVVIGNSANNVFFESS--------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G G+D + G + N+ + S GND+ DG +G D + Y R
Sbjct: 636 GGIGDDELYGGAGNDKLYGESVNPLGTETGNDILDGGTGNDFLYGGYGVDTYIFRRGYGE 695
Query: 325 IIVYDANEHKQ 335
+ ++
Sbjct: 696 DTINNSVPSGS 706
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 10/134 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY I + +S+ G SGND + GN ++ + +D G G D
Sbjct: 1550 IQGYGGADIITGGSNKDSIFGGSGNDNIHGNDGIDILSGGNEDDSLYGDDGNDILKGELG 1609
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + D L + V+ IL+ + L+
Sbjct: 1610 NDTL----YGGLGNDSLDGAEGDDTLFGEQ------GDDSLVSGIGNDILDGGLGNDYLV 1659
Query: 373 QVIGQDVFESMKHF 386
+G D + +++
Sbjct: 1660 GGLGNDTYTFQENY 1673
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G+ G+D + G ++ GND+ +G +G D + + +Y +
Sbjct: 784 DGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTDILEGGSGNDIYIFKKGYRED 843
Query: 326 IVYDANEHKQDFLSDVERL 344
+ N +D +S+++ L
Sbjct: 844 TI--INSTLEDNISEIDTL 860
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 32/82 (39%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G+ G+D++ G ++ + GND +G G DT+ + I F
Sbjct: 38 EEIYGNGGDDILHGAGGDDTIYGGEGNDTLEGGIGSDTYIFQKGYGQDIINNFTEINDTT 97
Query: 329 DANEHKQDFLSDVERLRFADQC 350
+ + K + + E D
Sbjct: 98 EIDTLKMVGIREEEVYAVRDGQ 119
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 251 SSIGGYEKNMTIAQ-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+++ G E N TI+ + V+G G+D++ G + N++ + G+D G G D +
Sbjct: 168 TTVEGTEANNTISGIASTNTVVIGKGGDDIITGINGNDLLYGGDGDDKLSGGLGNDDLYG 227
Query: 310 YAPSY 314
A +
Sbjct: 228 GAGND 232
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 27/125 (21%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS--------------- 284
+ I+ ++ + + G TI + ++ G GND++ G S
Sbjct: 1338 DDQINAYSDFDTKVEGRGGIDTILGDSGNDNFKGEGGNDILTGGSGNDVLDGGDGDDSLD 1397
Query: 285 ------------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N+ SGND +G SG DT +Y + I+ +
Sbjct: 1398 GGQGDDLLVGGNGNDTINAGSGNDTLNGGSGNDTLSGDIGDDIYIFKKGYGQDIIDNHTA 1457
Query: 333 HKQDF 337
D
Sbjct: 1458 TINDI 1462
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ N T+ +++ G G+D + N++ +G D+ +G SG D + +
Sbjct: 781 SPLDGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTDILEGGSGNDIYIFKKGY 840
Query: 314 YLYKI 318
I
Sbjct: 841 REDTI 845
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 252 SIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G++ TI + ++ G +GND + G+ + SG+D G SG DT+ +
Sbjct: 1952 NLTGFDDFNTILMGKGGDDIIQGKNGNDKLFGDDGTDYLDGGSGDDSLFGGSGNDTYIFK 2011
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS----DVERLRFA 347
I + + N+ + D L +VE + +
Sbjct: 2012 VGYGQDTINNYTSE------NDTETDILKMDGVNVENIIAS 2046
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+I G E N T+ ++ +++ G G+D + G++ + + +GND+ G D+
Sbjct: 923 AMLSAIEGTEVNDTLVGYSDFNNIIKGYDGDDNITGSNYKDELYGGNGNDIIVAGVGDDS 982
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
A + D L +
Sbjct: 983 LEGGAGIDNLD----GGTGNDLLNGGYDNDTLKGGD 1014
Score = 44.3 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 3/121 (2%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
++V+ G ++ S D G SG D + ++++ D N+ +
Sbjct: 1547 DNVIQGYGGADIITGGSNKDSIFGGSGNDNIHGNDGIDILSGGNEDDSLYGDDGNDILKG 1606
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEG 394
L + + L + L + L+ IG D+ + + GL
Sbjct: 1607 ELGN-DTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVSGIGNDILDGGLGNDYLVGGLGND 1665
Query: 395 R 395
Sbjct: 1666 T 1666
>gi|125717928|ref|YP_001035061.1| calcium binding hemolysin-like protein [Streptococcus sanguinis SK36]
gi|125497845|gb|ABN44511.1| Calcium binding hemolysin-like protein, putative [Streptococcus
sanguinis SK36]
Length = 1477
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N+TI +++ GSSG+D + G+ N+ GND+ DG SG D + A
Sbjct: 1240 LSSPINNLTIYAGAGNDTLNGSSGSDKLYGDKGNDELNGGDGNDLLDGGSGNDKLYGGAG 1299
Query: 313 SYLYKIYRFENAIIVYD 329
Y + D
Sbjct: 1300 DDTYIFDLGHGKDTISD 1316
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 66/227 (29%), Gaps = 62/227 (27%)
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE-----VQQKDS 216
VM+ + D +D K+YG G++ Y + D+
Sbjct: 781 VMASGGDDNVQGDKQNNILEGGSGND-----KLYG----GAGDDTYIFDLGHGKDTISDN 831
Query: 217 PFIQTIYDSGGD-------------------------DLLDLTLIGGVKNYIDL------ 245
+ TI G D + + +Y +L
Sbjct: 832 DGLSTIRFGAGIALADLQVSHPVNDSWSAVLTNTKTGDSITFSNFRFSASYRNLKLVFSD 891
Query: 246 -NTESWSS----------------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
S + N+TI +++ GSSG+D + G+ +++
Sbjct: 892 GTELGVSDEGSPFRTLYGTSESEYLSSPINNLTIYAGAGNDTLNGSSGSDRLYGDEGDDL 951
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
SGND+ +G SG D + A Y + D +
Sbjct: 952 LEGDSGNDLLEGGSGNDKLYGGAGDDTYIFDLGHGKDTISDNDGLST 998
Score = 40.5 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVI------ESVVGSSGNDVVIGNSANNVFFE 291
G+ Y D T S Y K + I V+ ES+ + V+ + ++
Sbjct: 733 GISGYQDFKTYFGSMSHDYLKAIMIGAGEVVMGSDKGESLQATEKQAFVMASGGDDNVQG 792
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
N++ +G SG D + A Y + D +
Sbjct: 793 DKQNNILEGGSGNDKLYGGAGDDTYIFDLGHGKDTISDNDGLST 836
>gi|211063451|ref|NP_001129963.1| matrilysin [Ovis aries]
gi|209571739|gb|ACI62525.1| matrix metallopeptidase 7 [Ovis aries]
Length = 267
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W++ + Y+ T+ + +L VA+ A WS+V+ LTF+ +DI
Sbjct: 104 WTSKVVTYRIMTYTSDLPHITVNQL------VAK-AFKIWSEVIPLTFKRVKWGTADIMI 156
Query: 82 ISSNNGYVCTPRYDSRY-------------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD+ + W G G + A HE+
Sbjct: 157 GFARRAHGDPYPFDGPGATLAHAFAPGPGLGGDAHFDEDERWTDASGIGINFLYVATHEL 216
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + VM ++ + DI
Sbjct: 217 GHSLGLSHSSDPDA-------------------VMYPTYSKEESKNFKLS------QDDI 251
Query: 189 VAVQKIYGAPKGSL 202
+QK+YG S
Sbjct: 252 NGIQKLYGKRNDSR 265
>gi|163735156|ref|ZP_02142592.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och 149]
gi|161391614|gb|EDQ15947.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och 149]
Length = 2672
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 79/281 (28%), Gaps = 43/281 (15%)
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL +GG ++ NDS + D FG M+
Sbjct: 2319 LGLEGDDMLSGGSGNDRLNGGDGNDSI---------EGGTGDDVLFGKAGDDMLDGGEGD 2369
Query: 192 QKIYGAP-----KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ G+ G G+++ + TI GDD + GG + I +N
Sbjct: 2370 DELIGSDGDDEINGQAGDDL------LRGGAGNDTIEGGEGDDTV----FGGNDDDI-IN 2418
Query: 247 TESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+GG N TI + + ++G +DV+ G + G+D G G D
Sbjct: 2419 GGVGDDMLGGNGGNDTINGGSGDDMLIGGLDSDVLDGGDGADELRGGGGDDTLFGGDGDD 2478
Query: 306 TFFYYAPSYLYKIYRF-----ENAIIVYDANEHKQDFLSDVERLRFADQCI--------- 351
F + N + E D L + D
Sbjct: 2479 VMFGSFNDDVLYGGAGNDVLNGNTQVDLLFGEAGNDILRGGDGFDTLDGGAGNDTLEGGN 2538
Query: 352 ---DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ IL A + + D +
Sbjct: 2539 GKDILNGGSGQDILRGQAQNDTFVFANASDSAFGSADLIDG 2579
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 11/142 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
GGDD L GG + D+ S++ + G N + +T ++ + G +GND++ G
Sbjct: 2465 GGGDDTL----FGGDGD--DVMFGSFNDDVLYGGAGNDVLNGNTQVDLLFGEAGNDILRG 2518
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV---YDANEHKQDFLS 339
+ +GND +G +G D + + + + + D+ D +
Sbjct: 2519 GDGFDTLDGGAGNDTLEGGNGKDILNGGSGQDILRGQAQNDTFVFANASDSAFGSADLID 2578
Query: 340 DVERLRFADQCIDSVNVKQRSI 361
+ + + +++
Sbjct: 2579 GFDGVGIQGGDVIDLSLIDADF 2600
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 72/210 (34%), Gaps = 32/210 (15%)
Query: 203 GNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTL--------------IGGVKNYIDLN 246
G++ + + + TI+ G D + + G +N I L+
Sbjct: 1001 GDDRFTVTGSGGLADLAPGMTIFGGEGVDTIGVAGNVDLQVSTGPLGVTFTGFENVIRLD 1060
Query: 247 TESWS---SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + + G + +I G G D+++G + N+V G DV DG +G
Sbjct: 1061 SGAGTLAGDDGANRLQDSTGDGVLI----GRGGADMLLGGAGNDVLIGGLGADVLDGGAG 1116
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER---------LRFADQCIDSV 354
DT Y + I A ++ E + D L D+ER R D+ +
Sbjct: 1117 TDTVSYADSTTSIFIREVPGAQMLGFRGEAQGDVLIDIERIEGSAFNDLFRGGDRSMTIE 1176
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ A + + G D+ +
Sbjct: 1177 GGDGDDRIVAGAGNDTIRGGDGDDLLLRAE 1206
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 56/191 (29%), Gaps = 23/191 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS---------- 252
+ ++ GG+D + D L GG N LN +
Sbjct: 2295 GTDDTVIGHDGKDQLFGFGGNDRILGLEGDDMLSGGSGNDR-LNGGDGNDSIEGGTGDDV 2353
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + ++GS G+D + G + +++ +GND +G G DT F
Sbjct: 2354 LFGKAGDDMLDGGEGDDELIGSDGDDEINGQAGDDLLRGGAGNDTIEGGEGDDTVFGGND 2413
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ D + S + L L +
Sbjct: 2414 DDI----INGGVGDDMLGGNGGNDTINGGSGDDMLIGGLDSDVLDGGDGADELRGGGGDD 2469
Query: 370 DLIQVIGQDVF 380
L G DV
Sbjct: 2470 TLFGGDGDDVM 2480
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 10/126 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG + T+ H + + G GND ++G +++ SGND +G G D+
Sbjct: 2291 LGGLGTDDTVIGHDGKDQLFGFGGNDRILGLEGDDMLSGGSGNDRLNGGDGNDSIEGGTG 2350
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
F A D L +D + +L A + +
Sbjct: 2351 DD----VLFGKAGDDMLDGGEGDDELIG------SDGDDEINGQAGDDLLRGGAGNDTIE 2400
Query: 373 QVIGQD 378
G D
Sbjct: 2401 GGEGDD 2406
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 65/209 (31%), Gaps = 50/209 (23%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG----------VKNYIDL- 245
AP G+ + ++ G D LDL G + +DL
Sbjct: 1496 APVTVTGDV---DGAGNTRVDWGSFLWGGDGIDTLDLRFDRGLSFLPSDGPAARAIVDLD 1552
Query: 246 ------------------------NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
N +S G N T+ IE+V+G++ +D++
Sbjct: 1553 VAPTNTTINTFTGERVVYGTAVFTNPGEDASARGSYVNATLYG---IENVLGTANDDIIS 1609
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE------HKQ 335
G++ +N G D DG G+DT Y S ++ + V N
Sbjct: 1610 GDARDNRIEGGGGADTMDGRGGMDTASYALASEGVELNLVRDGAGVRLENSGGGTGDAAG 1669
Query: 336 DFLSDVERLR---FADQCIDSVNVKQRSI 361
D ER FAD + V +
Sbjct: 1670 DTAVGFERFEGSDFADTVTLTGPVATGNA 1698
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 20/137 (14%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGS 274
+ G D + I + + + G+ AQ V IE + GS
Sbjct: 1107 GADVLDGGAGTDTVSYADSTTS---IFIREVPGAQMLGFRGE---AQGDVLIDIERIEGS 1160
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----------YKIYRFEN 323
+ ND+ G + G+D +G DT L ++ N
Sbjct: 1161 AFNDLFRGGDRSMTIEGGDGDDRIVAGAGNDTIRGGDGDDLLLRAEEGQVSGANVFDGGN 1220
Query: 324 AIIVYDANEHKQDFLSD 340
+ E + F++
Sbjct: 1221 GFDLLGGFEGGERFVTG 1237
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 20/160 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN---TESWSS 252
GA G + + I + G +L ID+ +++
Sbjct: 1107 GADVLDGGAGTDTVSYADSTTSIF--IREVPGAQMLGFRGEAQGDVLIDIERIEGSAFND 1164
Query: 253 IG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN--------------NVFFESSGNDV 297
+ G +++MTI + +V +GND + G + NVF +G D+
Sbjct: 1165 LFRGGDRSMTIEGGDGDDRIVAGAGNDTIRGGDGDDLLLRAEEGQVSGANVFDGGNGFDL 1224
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G G + F + S + + ++ + +
Sbjct: 1225 LGGFEGGERFVTGSVSGTVRFVDRDPRGLLPFQDNNVDRT 1264
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E V+G++ +D + G A+ F+ + G+D + ++G D + L + V
Sbjct: 1402 VEGVIGTTRDDELFGAGADEAFYGNGGDDYIEAAAGDDILGFGEGQALRDLTDPPGDTAV 1461
Query: 328 YDANEHK 334
Sbjct: 1462 PSFGRSG 1468
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 24/68 (35%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G++ DV+IG ++ G+D G D+ A L
Sbjct: 833 ILANAGNPELRGTAQADVIIGLGGDDRLLGLEGDDTLFPGEGADSVDGGAGVDLVDFSDL 892
Query: 322 ENAIIVYD 329
A++
Sbjct: 893 IGAVLTTG 900
Score = 40.5 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G G+D ++G ++ F G D DG +G+D + + ++
Sbjct: 849 DVIIGLGGDDRLLGLEGDDTLFPGEGADSVDGGAGVDLV--DFSDLIGAVLTTGYDGLLP 906
Query: 329 DANEHKQDF 337
D
Sbjct: 907 SGVRAGVDV 915
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 27/71 (38%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N A+ E ++ ++GN + G + +V G+D G G DT F +
Sbjct: 821 NQANAELAEAELILANAGNPELRGTAQADVIIGLGGDDRLLGLEGDDTLFPGEGADSVDG 880
Query: 319 YRFENAIIVYD 329
+ + D
Sbjct: 881 GAGVDLVDFSD 891
>gi|291571624|dbj|BAI93896.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 802
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + I +++ G G+D + GN+ +++ F ++GND+ G G DT F
Sbjct: 57 IYGNQGDDQIFGGGGNDTLYGGQGDDYIEGNAGDDLIFGNAGNDILSGGLGNDTIFGGPG 116
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED 370
+ + N I D + E L F D +++ + Y +D
Sbjct: 117 NDVIDGDGGNNLIY----GGQGADIIRGGEGNDLIFGDAGENTIFGGPGNDTLYGGIDDD 172
Query: 371 LIQ 373
I
Sbjct: 173 QIG 175
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 23/192 (11%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ +Y + + + I+ + G+D+L + T+ GG N + I G
Sbjct: 73 DTLYGGQGDDYIEGNAGDDLIFGNAGNDILSGGLGNDTIFGGPGNDV---------IDGD 123
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N I + + G GND++ G++ N F GND G D + L
Sbjct: 124 GGNNLIYGGQGADIIRGGEGNDLIFGDAGENTIFGGPGNDTLYGGIDDDQIGGGLGNDL- 182
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
F + D + + + + + L + +
Sbjct: 183 ---IFGGLGDDIISGGEGDDTIYGGLGNDLILADEGNNILFGNAGSNTLVGGTGNDTFVL 239
Query: 374 VIGQDVFESMKH 385
G +
Sbjct: 240 EAGDGFTTADTD 251
>gi|307579000|gb|ADN62969.1| peptidase M23 [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 936
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 46/118 (38%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D ++ N I + + I G + N I + + + G +GND++ G
Sbjct: 731 WDEAAIKARVISNGDASNNTIIGYKDGSNRIYGLDGNDEIYGGALDDMLYGGAGNDMLSG 790
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ SGNDV G +G DT+ + + + +I ++ D Q +
Sbjct: 791 GKGADTLDGGSGNDVLYGGTGNDTYRFAIGAGVDRIEDYDTTTGNADVLSIGQGVSIN 848
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N G + + + + +I GND++IG N+ G+D+ DG +G D
Sbjct: 581 NEHYLPGTLGSDLLVGTSGNDLIRGGGNGEGNDILIGKGGNDELSGGLGDDILDGGTGND 640
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ Y++ + D++ + + +RFAD ++ +R +
Sbjct: 641 VLSGGTGNDTYRLAIGAGVDRIEDSDS----TPGNTDVVRFADVASTALTALERKDNDLV 696
Query: 366 ASY 368
Y
Sbjct: 697 IKY 699
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 67/241 (27%), Gaps = 49/241 (20%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTE---- 248
G GN+ Y++ + + G D++ + DL +
Sbjct: 643 SGGTGNDTYRLAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTG 702
Query: 249 -----------SWSSI-------------------------GGYEKNMTIAQHTVIESVV 272
+S G N I +
Sbjct: 703 DQLTISSYFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYKDGSNRIY 762
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND + G + +++ + +GND+ G G DT + + + +Y A
Sbjct: 763 GLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDV--LYGGTGNDTYRFAIG 820
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFESMKHFYEFGL 391
D + D + + + L + DL + +IG ++ +Y
Sbjct: 821 AGVDRIEDYDTTTGNADVLSIGQGVSINQLWFQHVGNDLEVSIIGTGDQITISDWYSNAA 880
Query: 392 S 392
Sbjct: 881 Y 881
>gi|121634380|ref|YP_974625.1| iron-regulated protein FrpC [Neisseria meningitidis FAM18]
gi|120866086|emb|CAM09824.1| iron-regulated protein FrpC [Neisseria meningitidis FAM18]
Length = 2029
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1353 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1410
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1411 GSTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 1466
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1467 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1526
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1527 IIRFTDGITAD 1537
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 953 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1010
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1011 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LNGGEGNDALYGYNGND 1066
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1067 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1126
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1127 IIRFTDGITAD 1137
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1153 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1210
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1211 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 1266
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1267 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1326
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1327 IIRFTDGITAD 1337
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1553 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1610
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1611 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1648
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V + GND +G G DT A + + + +
Sbjct: 1649 TLNGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1706
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1707 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1754
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1753 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1810
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1811 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1848
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1849 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1906
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1907 GKGFGQDTVYN 1917
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 860 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 919
Query: 323 NAIIVYDANEHKQDFLSD 340
AI D +D
Sbjct: 920 YAIGRKDIIRFTDGITAD 937
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1813 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGE 1872
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1873 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1932
Query: 390 GLS 392
+
Sbjct: 1933 KAA 1935
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 11/106 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1013 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 1072
Query: 330 ANE-----HKQDFLSD------VERLRFADQCIDSVNVKQRSILEY 364
N+ D L +E +D + Q ++ Y
Sbjct: 1073 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1118
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 11/106 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1213 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1272
Query: 330 ANE-----HKQDFLSD------VERLRFADQCIDSVNVKQRSILEY 364
N+ D L +E +D + Q ++ Y
Sbjct: 1273 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1318
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 11/106 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1413 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1472
Query: 330 ANE-----HKQDFLSD------VERLRFADQCIDSVNVKQRSILEY 364
N+ D L +E +D + Q ++ Y
Sbjct: 1473 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1518
>gi|71896245|ref|NP_001025559.1| matric metalloproteinase 14 [Xenopus (Silurana) tropicalis]
gi|60649681|gb|AAH90600.1| matrix metallopeptidase 14 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
Length = 578
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 59/202 (29%), Gaps = 56/202 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W + I + T + E R A W V L F E
Sbjct: 110 WQHKDITFCIQNYTPKIGEYSTYE-------AIRRAFKVWESVTPLRFREVRYVDIKDGY 162
Query: 74 SIHSDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
+ H+DI G++ + + +FD A+ W R G
Sbjct: 163 TKHADIMLFFAEGFHGDSTPFDGEGGFLAHAYFPGPGIGGDTHFDSAEPWTARNDDLDGN 222
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HE+GHALGL H + +M+ F +
Sbjct: 223 DLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQWMDTQNFQ-- 261
Query: 179 YCATPMVSDIVAVQKIYGAPKG 200
D +Q++YG G
Sbjct: 262 ----LPDDDRRGIQQLYGPNHG 279
>gi|189218532|ref|YP_001939173.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum V4]
gi|189185390|gb|ACD82575.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum V4]
Length = 320
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 12/92 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDL 452
GR FD Y SY + + HY+ G KEG+NP +F + Y+ S+ D+
Sbjct: 14 GRLGFFDEKFYCQSYPEACK----GGISPLDHYLEIGWKEGKNPSLSFNSSWYLNSYPDV 69
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + H+ FG EGR
Sbjct: 70 AKSGINP-------LVHYIEFGIFEGRLPAPS 94
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 10/105 (9%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL 411
+ Y SY + + H+ E G EG++ + F+S YL SY D+
Sbjct: 14 GRLGFFDEKFYCQSYP----EACKGGISPLDHYLEIGWKEGKNPSLSFNSSWYLNSYPDV 69
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
HYI G+ EGR P + + A
Sbjct: 70 AK----SGINPLVHYIEFGIFEGRLPAPSFCWNKRLDYPGSVKAL 110
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 536
GR FD Y SY + + HY+ G KEG+NP F + Y+ S+ D+
Sbjct: 14 GRLGFFDEKFYCQSYPEACK----GGISPLDHYLEIGWKEGKNPSLSFNSSWYLNSYPDV 69
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ + H+ FG EGR
Sbjct: 70 AKSGINP-------LVHYIEFGIFEGRLPA 92
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F Y S+ + DH+ G++EG+ S++FN YL SY D+
Sbjct: 19 FDEKFYCQSYPEACKGGISP-------LDHYLEIGWKEGKNPSLSFNSSWYLNSYPDVAK 71
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGIS 608
HYI G+ EGR S
Sbjct: 72 ----SGINPLVHYIEFGIFEGRLPAPS 94
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 14/109 (12%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGS 491
GR F Y S+ + DH+ G +EG+ + F+S YL S
Sbjct: 14 GR-LGFFDEKFYCQSYPEACKGGISP-------LDHYLEIGWKEGKNPSLSFNSSWYLNS 65
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
Y D+ HYI G+ EGR P + + A
Sbjct: 66 YPDVAKSG----INPLVHYIEFGIFEGRLPAPSFCWNKRLDYPGSVKAL 110
Score = 40.5 bits (93), Expect = 0.98, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
GR F+ Y SY + + HY+ G KEG+ + F S L
Sbjct: 14 GRLGFFDEKFYCQSYPEACK----GGISPLDHYLEIGWKEGKN---PSLSFNSSWYL 63
>gi|326680219|ref|XP_001924042.3| PREDICTED: matrix metalloproteinase-15 [Danio rerio]
Length = 623
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 61/211 (28%), Gaps = 60/211 (28%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ--EVARWALGEWSKVVDLTFEETSI 75
L W+ + Y + Q E R A W KV L FEE
Sbjct: 114 LTGHKWNQNNLTYSIQNHSPKVG---------QQQTYEAIRKAFRVWEKVTPLQFEEVPY 164
Query: 76 H--------------------SDIKFISSNNGYVCTPRYDSRY-FMEINFDKADVWRYG- 113
H D+ G + + + +FD + W
Sbjct: 165 HKIKNGSEGPDIILLFASGYHGDMSLFDGEGGSLAHAFFPGPGMGGDTHFDTDEPWTLNQ 224
Query: 114 -IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G G L A+HE+GHALGL H + + +M+ F
Sbjct: 225 QEGSGVDLFLVAVHELGHALGLEHSNNPSA-------------------IMAPFYQWMDT 265
Query: 173 MDASFGYCATPMVSDIVAVQKIYGA-PKGSL 202
+ DI + +IYG PK +
Sbjct: 266 ESFALA------DDDINGIHQIYGKLPKTTR 290
>gi|320104907|ref|YP_004180498.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC 43644]
gi|319752189|gb|ADV63949.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC 43644]
Length = 2233
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 7/169 (4%)
Query: 220 QTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T++ G L TL GG N + + G + T+ + + G G+
Sbjct: 1946 DTLWGGDGVSLFFDSDTLCGGEGNDLLFGESGDDVLFGRAGDDTLYGGAGQDYLFGGEGD 2005
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G + N+ GNDV G G D F A F NA D+
Sbjct: 2006 DFLFGEAGNDTLVGGDGNDVISGGDGNDIAFGGAGDD----TIFGNAGNDTLQGGDGNDW 2061
Query: 338 LSDVERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
L + + D S+ +L +++L G ++ ++ +
Sbjct: 2062 LIGGDTFNLVHRPRDRSIPFDGDDVLLGEDGFDNLDGGTGNNIMDAGRD 2110
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 40/228 (17%)
Query: 199 KGSLGNNIYKIEVQQ----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G GN+ + G+DLL + DLN + G
Sbjct: 1654 NGGEGNDTLGAGNSAINPLPAGTPGLVLIGGPGNDLLRGS---------DLNDTIFGGAG 1704
Query: 255 GY----EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ N TI + +S+VG +G+D + G + N++ +G D+ DG +G DT +
Sbjct: 1705 NNNPVEDGNNTIEGNGGDDSLVGGAGDDTITGGAGNDLIQGGAGTDLLDGEAGNDTLWGG 1764
Query: 311 APSYLYKIYR---------------FENAIIVYDANEHKQDFLSDVERLR--------FA 347
+ N +I DA ++ +R
Sbjct: 1765 LIGVTSDLTDDTLIGGPGNDQLHGTSGNNLIQGDAGNDLVRGVAGNNTIRGGGGDDTLLG 1824
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
Q D + ++ L + D+ + F + G R
Sbjct: 1825 GQGADVITGEEGDDLILGDADFDIATLTIVPATIGSGDFLDGGAGNDR 1872
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 43/146 (29%), Gaps = 38/146 (26%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+Y G D L GG + ++ G + N I+ + G +G+D
Sbjct: 1988 DTLYGGAGQDYL----FGGEGDDFLFGEAGNDTLVGGDGNDVISGGDGNDIAFGGAGDDT 2043
Query: 280 VIGNSANNVFFESSGNDVF----------------------------------DGSSGLD 305
+ GN+ N+ GND DG +G +
Sbjct: 2044 IFGNAGNDTLQGGDGNDWLIGGDTFNLVHRPRDRSIPFDGDDVLLGEDGFDNLDGGTGNN 2103
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN 331
++ + IV++
Sbjct: 2104 IMDAGRDNFREVVTAHIGNNIVFNRQ 2129
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 4/109 (3%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T G+D +D + + + S + G I + ++G +GND++
Sbjct: 1419 TADGGAGNDTIDFSDFTLQGATLLGGAGNDS-LTGTTFGDVIDGGDGDDLIIGGAGNDLL 1477
Query: 281 IGNSANNVFF---ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+G N+ F SG D G G+D + NA I
Sbjct: 1478 LGGVGNDTFVINAGDSGADTIVGGDGVDAAVINGTNANDTFVLGANAAI 1526
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 15/125 (12%)
Query: 222 IYDSGGDDLLDLTLIGGV--KNYIDLNTESWS-SIGGYEKNMTIAQHTVI---ESVVGSS 275
I + D + IDLN S + G N TI +++G +
Sbjct: 1386 IEGTNAADTITGAGTSVSLNDATIDLNGTFESLTADGGAGNDTIDFSDFTLQGATLLGGA 1445
Query: 276 GNDVVIG---------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
GND + G +++ +GND+ G G DTF A + +
Sbjct: 1446 GNDSLTGTTFGDVIDGGDGDDLIIGGAGNDLLLGGVGNDTFVINAGDSGADTIVGGDGVD 1505
Query: 327 VYDAN 331
N
Sbjct: 1506 AAVIN 1510
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 38/254 (14%), Positives = 66/254 (25%), Gaps = 69/254 (27%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN------------------ 241
G LGN+ Y + + + + G D ++ G +
Sbjct: 1555 GGLGNDSYIVNDLSTTNLRLVDLDGGAGTDSYQVSGTVGADDIGVARPNAAGPVLIQGLS 1614
Query: 242 --------YIDLNTESWSSIG-------------------GYEKNMTIAQHTVIES---- 270
ID G G E N T+ +
Sbjct: 1615 ATVRVFGPTIDETLTVLGGAGDDRIVSDAEVSRNLRVVLNGGEGNDTLGAGNSAINPLPA 1674
Query: 271 ------VVGSSGNDVVIGNSANNVFFESS--------GNDVFDGSSGLDTFFYYAPSYLY 316
++G GND++ G+ N+ F + GN+ +G+ G D+ A
Sbjct: 1675 GTPGLVLIGGPGNDLLRGSDLNDTIFGGAGNNNPVEDGNNTIEGNGGDDSLVGGAGDDTI 1734
Query: 317 KIYRF-----ENAIIVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTASYED 370
A E D L +D D+ + L T+
Sbjct: 1735 TGGAGNDLIQGGAGTDLLDGEAGNDTLWGGLIGVTSDLTDDTLIGGPGNDQLHGTSGNNL 1794
Query: 371 LIQVIGQDVFESMK 384
+ G D+ +
Sbjct: 1795 IQGDAGNDLVRGVA 1808
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 13/163 (7%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
F D++ S G T ++ V +Q G ++ N + + +
Sbjct: 209 FGGTDTVNIGSAGSAQT--INAPVTLQNTLGFNNVTINN---GADATGRTVGLNLVGGNV 263
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV----- 280
+ + + +DL S N ++ T ++ +GND +
Sbjct: 264 VVSGVAPANISMVEADTLDLTINLGSGADVVNVNTSVTFATT--TINTGAGNDTINVAAA 321
Query: 281 -IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+G + NV +G+DV + ++G DT + F
Sbjct: 322 LLGGGSINVINGGAGSDVLNVNAGGDTVEVIFTGPDSGLVTFG 364
>gi|307688161|ref|ZP_07630607.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 1383
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 19/216 (8%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
DI ++ + ++ Q S F I GGDD + G N L
Sbjct: 353 WDIEKTRQ---VAMATTIEGTEGRDIIQGYSDFNNKIVAKGGDD-----EVTGSDNNDTL 404
Query: 246 NTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + I G N T+ +S++G +GND ++G N++ +G+D +G G
Sbjct: 405 DGGAGIDILNGKGGNDTLIGGMGNDSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGGIGN 464
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT + +YK + I+ ++N E F +D +K+ +
Sbjct: 465 DTLIGGYGTDIYKFKKGFGQDIIINSN----------ETNAFELDRLDMDGIKEEEVKAT 514
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ ++ + + ++ ++ +G S I FD
Sbjct: 515 REGQDLVLIIKETEESIRIQDYFTYGSSAISKIKFD 550
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 17/174 (9%)
Query: 216 SPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
S F I GDD + + GG N I I + ++ I++
Sbjct: 177 SDFNNIIKGYDGDDNITGSNYKDELYGGNGNDI---------IVAGVGDDSLEGGAGIDN 227
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++ G N+ GND+ G SG D + Y + I+ ++
Sbjct: 228 LDGGTGNDLLNGGYDNDTLKGGDGNDILIGGSGYDILEGGNGNDTYIFKQGFRQDIINNS 287
Query: 331 NEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D+ E L+ +D + + T Y + D
Sbjct: 288 NTSNDITEVDILKMEGLKESDVRVSRQGQNLILGIRETGEYVKVQGYFNYDSSA 341
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 15/160 (9%)
Query: 186 SDIVAVQKIYGAPKGSLG----NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
D+ V + YG G ++I+ SGG++ D +L G N
Sbjct: 780 DDLDNVIQGYGGADIITGGSNKDSIFGGSGNDNIHGNDGIDILSGGNE--DDSLYGDDGN 837
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I + G N T+ +S+ G+ G+D + G ++ GND+ DG
Sbjct: 838 DI---------LKGELGNDTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVSGIGNDILDGG 888
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G D + Y I+ + N + D+
Sbjct: 889 LGNDYLVGGLGNDTYTFQENYGQDIINNLNVGANNSEVDI 928
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 2/154 (1%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+D V++Q + +L N I+ V+ + + G D +D + I L
Sbjct: 956 NDSVSIQGYFNYDSAALSNIIFADNVKWDVTKIKEMPITVEGTDNVDTIIGFSELKNIVL 1015
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I G T+ + + G +G+D++ G ++ GND+ DG G D
Sbjct: 1016 GKGGTDIITGSSNADTLDGGLGNDMLAGGAGDDILKGGDGDDSLTGGIGNDILDGEQGND 1075
Query: 306 TFFYYAPSYLYKI--YRFENAIIVYDANEHKQDF 337
+ Y E I YD+ + D
Sbjct: 1076 HLIGSYGNDTYIFRKGYGEERIENYDSGTNSSDI 1109
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 13/126 (10%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
++ S + GG D++ + + G N +A
Sbjct: 998 TDNVDTIIGFSELKNIVLGKGGTDIITGSSNADT-------------LDGGLGNDMLAGG 1044
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G G+D + G N++ GND GS G DT+ + +I +++
Sbjct: 1045 AGDDILKGGDGDDSLTGGIGNDILDGEQGNDHLIGSYGNDTYIFRKGYGEERIENYDSGT 1104
Query: 326 IVYDAN 331
D +
Sbjct: 1105 NSSDID 1110
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 10/134 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY I + +S+ G SGND + GN ++ + +D G G D
Sbjct: 786 IQGYGGADIITGGSNKDSIFGGSGNDNIHGNDGIDILSGGNEDDSLYGDDGNDILKGELG 845
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + D L + V+ IL+ + L+
Sbjct: 846 NDTL----YGGLGNDSLDGAEGDDTLFGEQ------GDDSLVSGIGNDILDGGLGNDYLV 895
Query: 373 QVIGQDVFESMKHF 386
+G D + +++
Sbjct: 896 GGLGNDTYTFQENY 909
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G+ G+D + G ++ GND+ +G +G D + + +Y +
Sbjct: 20 DGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTDILEGGSGNDIYIFKKGYRED 79
Query: 326 IVYDANEHKQDFLSDVERL 344
+ N +D +S+++ L
Sbjct: 80 TI--INSTLEDNISEIDTL 96
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 27/125 (21%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS--------------- 284
+ I+ ++ + + G TI + ++ G GND++ G S
Sbjct: 574 DDQINAYSDFDTKVEGRGGIDTILGDSGNDNFKGEGGNDILTGGSGNDVLDGGDGDDSLD 633
Query: 285 ------------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N+ SGND +G SG DT +Y + I+ +
Sbjct: 634 GGQGDDLLVGGNGNDTINAGSGNDTLNGGSGNDTLSGDIGDDIYIFKKGYGQDIIDNHTA 693
Query: 333 HKQDF 337
D
Sbjct: 694 TINDI 698
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 27/65 (41%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ N T+ +++ G G+D + N++ +G D+ +G SG D + +
Sbjct: 17 SPLDGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTDILEGGSGNDIYIFKKGY 76
Query: 314 YLYKI 318
I
Sbjct: 77 REDTI 81
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 252 SIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G++ TI + ++ G +GND + G+ + SG+D G SG DT+ +
Sbjct: 1188 NLTGFDDFNTILMGKGGDDIIQGKNGNDKLFGDDGTDYLDGGSGDDSLFGGSGNDTYIFK 1247
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS----DVERLRFA 347
I + + N+ + D L +VE + +
Sbjct: 1248 VGYGQDTINNYTSE------NDTETDILKMDGVNVENIIAS 1282
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+I G E N T+ ++ +++ G G+D + G++ + + +GND+ G D+
Sbjct: 159 AMLSAIEGTEVNDTLVGYSDFNNIIKGYDGDDNITGSNYKDELYGGNGNDIIVAGVGDDS 218
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
A + D L +
Sbjct: 219 LEGGAGIDNLD----GGTGNDLLNGGYDNDTLKGGD 250
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 3/121 (2%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
++V+ G ++ S D G SG D + ++++ D N+ +
Sbjct: 783 DNVIQGYGGADIITGGSNKDSIFGGSGNDNIHGNDGIDILSGGNEDDSLYGDDGNDILKG 842
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEG 394
L + + L + L + L+ IG D+ + + GL
Sbjct: 843 ELGN-DTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVSGIGNDILDGGLGNDYLVGGLGND 901
Query: 395 R 395
Sbjct: 902 T 902
>gi|207727685|ref|YP_002256079.1| hemolysin-type calcium-binding protein (partial sequence n
terminus) [Ralstonia solanacearum MolK2]
gi|206590926|emb|CAQ56538.1| hemolysin-type calcium-binding protein (partial sequence n
terminus) [Ralstonia solanacearum MolK2]
Length = 1117
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 1/152 (0%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ G + N + + + G N ++ + + G GND + GN +
Sbjct: 521 TENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGGAGDDVIYGGDGNDFLQGNDGADT 580
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+G+D DG +G DT + A + + + N+ D + ++D
Sbjct: 581 LDGGTGDDTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSD 640
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + A E ++ G D+
Sbjct: 641 YDTSAGKLNVIQFKDGVAPSEVVVTRSGSDLV 672
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND + G + N+ + +GND DG +G DT
Sbjct: 747 NVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEG 806
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+ Y + + +Y + + L ++F D +
Sbjct: 807 GNDTYLFGKGDGQDFIYSDYDTSANKL---NVIQFKDGVL 843
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND + G N+ + +GNDV +G +G D
Sbjct: 932 NVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGDDNDSLYGGNGNDVLEGGTGNDYLSGEG 991
Query: 312 PSYLYKIYRFENAIIV--YDANEHKQDFLSDVERL 344
S Y + YD + D ++ E +
Sbjct: 992 GSDTYVFNSGWGQDTINNYDTTSGRSDVITFGEGI 1026
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 44/134 (32%), Gaps = 22/134 (16%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y +Y GGDD+LD G N T+
Sbjct: 918 YTEADTINALGGNDNVYGQGGDDVLD----------------------GGAGNDTLYGGE 955
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G ND + G + N+V +GND G G DT+ + + I ++
Sbjct: 956 GNDTLRGGDDNDSLYGGNGNDVLEGGTGNDYLSGEGGSDTYVFNSGWGQDTINNYDTTSG 1015
Query: 327 VYDANEHKQDFLSD 340
D + +D
Sbjct: 1016 RSDVITFGEGIATD 1029
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 5/178 (2%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + +P Q + G DL I D +S ++ GY + TI
Sbjct: 689 YWDDTANPYNPIQQVKFSDG--TTWDLATIKAKALIGD---DSAQTLVGYTEADTINALG 743
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++V G G+DV+ G + N+ + GND G + D + + + +
Sbjct: 744 GNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLS 803
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N+ D + ++D + + + E ++ G D+ S+
Sbjct: 804 GEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVLPSEVVVTRSGSDLVLSIA 861
>gi|332227957|ref|XP_003263157.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-15-like
[Nomascus leucogenys]
Length = 753
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 67/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + ++ + R A W + L F+E
Sbjct: 216 YALTGRKWNNHHLTFSIQNYTEKLGWY-------HSMDAVRRAFRVWEQATPLVFQEVPY 268
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 269 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 328
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + N +M+ F
Sbjct: 329 STDLHGNNLFLVAVHELGHALGLEHSSNPNA-------------------IMAPFYQWKD 369
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 370 VDNFK------LPEDDLRGIQQLYGTPDG 392
>gi|240142877|ref|YP_002967390.1| putative peptidase [Methylobacterium extorquens AM1]
gi|240012824|gb|ACS44049.1| putative peptidase [Methylobacterium extorquens AM1]
Length = 1045
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 206 IYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+Y E + + T+ D+ GG D L+ + + + DL T +I G +++A
Sbjct: 524 VYTDEFRVYGAGTRATLRDADGGIDTLNASPVTTAIAF-DLATGG--TIAGRA--VSVAS 578
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
TV+E+ V G+D + GN+A+N G+DV DG +G + A +
Sbjct: 579 GTVLENFVAGDGDDRITGNAADNRLLGGRGDDVLDGGAGRNRLEGGAGDDV 629
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQT---IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GN++ + Q + I G D+LD +Y+ +
Sbjct: 799 AGAGNDVVQGSAQADGIKGGEGADWIEGGAGADVLDGGAGIDWLSYLASGAAVRVDMVAG 858
Query: 257 EKNMTIAQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
AQ I E+V GS DV+ GN+A N ++G+D G G D +
Sbjct: 859 VCGGGDAQGDRISNFENVTGSRFADVLFGNNAANTLEGNAGDDEIRGGGGADILRGGDGN 918
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ ++V A ++ + + +
Sbjct: 919 DRL-FGDDGSDMLVGGAGTNRLTGGAGADLFQ 949
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G G D++ G N+ F G+D+ G +G + A + L+++ R I+
Sbjct: 901 DEIRGGGGADILRGGDGNDRLFGDDGSDMLVGGAGTNRLTGGAGADLFQVSRIGMQIVED 960
Query: 329 DANEHKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ +L E AD+ + + + +++ + G
Sbjct: 961 FTRGQDRIYLQASEFGSILADKRVGADDFAAGVRVDFAGRHAGFFFETGS 1010
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ + V GS+ D + G + +G DV DG +G+D Y A ++
Sbjct: 796 TVDAGAGNDVVQGSAQADGIKGGEGADWIEGGAGADVLDGGAGIDWLSYLASGAAVRVDM 855
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V + + D +S+ E + + + LE A +++ G D+
Sbjct: 856 VAG---VCGGGDAQGDRISNFENVTGSRFADVLFGNNAANTLEGNAGDDEIRGGGGADIL 912
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 56/198 (28%), Gaps = 30/198 (15%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES------ 292
+ + S+ G EK + A I G + N+V
Sbjct: 661 ANQSRNAGAAAGDSLTGIEKIVGTAYGDEI---HAGGGVVRIEAGGGNDVLHGDGVSGAV 717
Query: 293 ----SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------YDANEHKQDFLSDVE 342
+G+D F G +G + + V ++ + + D +E
Sbjct: 718 LSGEAGDDRFIGGAGGQVHDGGEGFDTVSFETARSGVTVDFADGSHNRGDAEGDTFEGIE 777
Query: 343 RL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ RF D + V+ + Q G E + E G G D+
Sbjct: 778 AVQGSRFDDVVRLAGTVRTVDAGAGNDVVQGSAQADGIKGGEG-ADWIEGGA--GADVLD 834
Query: 400 -----DSYLYLGSYDDLR 412
D YL S +R
Sbjct: 835 GGAGIDWLSYLASGAAVR 852
>gi|73955228|ref|XP_546547.2| PREDICTED: similar to Neutrophil collagenase precursor (Matrix
metalloproteinase-8) (MMP-8) (PMNL collagenase)
(PMNL-CL) [Canis familiaris]
Length = 451
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 62/215 (28%), Gaps = 53/215 (24%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP D +L W + Y+ T ++ + + A W
Sbjct: 74 KPRCGVPDSGDFMLTPGNPKWKQTNLTYRIIKYTPQLSEANV-------ETAIQKAFQVW 126
Query: 63 SKVVDLTFEETSIHS-DIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKAD 108
S V LTF + S DI+ +N P +++FD +
Sbjct: 127 SNVSPLTFTKVSQGEVDIRISFVQGDHGDNSPFDGPNGILAHAFQPGQGIGGDVHFDAEE 186
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W L A HE+GH+LGL H +M
Sbjct: 187 TWTENSSNYN-LFLVAAHEVGHSLGLSHSTDPGA-------------------LM----- 221
Query: 169 QDSMMDASFGYCATPMV--SDIVAVQKIYGAPKGS 201
+ F +T + DI +Q IYG
Sbjct: 222 ---YPNYVFHDPSTYTLPQDDINGIQTIYGPSSNP 253
>gi|163851089|ref|YP_001639132.1| heme peroxidase [Methylobacterium extorquens PA1]
gi|163662694|gb|ABY30061.1| Animal haem peroxidase [Methylobacterium extorquens PA1]
Length = 3587
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 52/170 (30%), Gaps = 27/170 (15%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF------- 289
N I I G N I + + V G G+D ++GN +
Sbjct: 1878 SATPNVILGRDGDD-DIEGDVGNDAIYAGSGDDRVDGGEGDDTLLGNDGADTLIGRTGNN 1936
Query: 290 -----------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV----YDANEHK 334
GND G +G DT Y P Y R +V A
Sbjct: 1937 TLDGGDDDDQLSGGHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDNLGAEGDG 1996
Query: 335 QDFLSDVERLRFADQ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L+ +E+++ + + + I+ TA L G D+
Sbjct: 1997 VDTLTTIEQIQMGNDLTPYALVANGTAAIDIVVGTAGNNTLSGGAGNDLV 2046
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 7/156 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I DSG D D L G N + N+ + G I V G+D
Sbjct: 1359 DIITDSG--DTGDF-LKGEDGNDVIANSNGIDILMGGRGKDAIFVGVDATEVFAGEGDDF 1415
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
VIG ++ + G+D +G G DT + + ++ +EH D S
Sbjct: 1416 VIGGDDADLLMGNEGDDWMEGGGGFDTTAGDNSELFFNSAIKGHDVMFAGGDEHDFDGES 1475
Query: 340 DVERLRFADQCIDSVNVKQRSILEY----TASYEDL 371
+ + + + + + Y A+ D+
Sbjct: 1476 GDDIMVQGESVMRNEGMFGFDWAIYKGNQIAANADM 1511
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 6/114 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVV 272
+ TI GDD + L GG + + + + + E + + V+
Sbjct: 3301 NGTAGADTILGLDGDDNI---LAGGGADVV--RAGAGNDFVDAGEGRDVVFAGDGDDDVL 3355
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G D+V G+ N+ +GND+ +G DT L+ +
Sbjct: 3356 SGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLFVAETGDGDDT 3409
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + ++++ G+D + G++ ++ +G D+ +G +G D + +
Sbjct: 1314 VLVGGTDGNDTIITDFGDDGIWGDAGDDRIEAGAGVDLVNGGAGDDIITDSGDTGDFLKG 1373
Query: 320 RFENAIIVYDANEHKQDFLSD 340
N +I AN + D L
Sbjct: 1374 EDGNDVI---ANSNGIDILMG 1391
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 14/187 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++++ E D + G G D LD++ I I +N + + G +
Sbjct: 3395 GDDLFVAETGDGDDTYWGDEMGGGLGSDTLDMSAITAN---IAVNLGTGLAGRGSATSTQ 3451
Query: 262 IAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +E+VV SGND + + A NV G+D + S A + I
Sbjct: 3452 SGRDVLWGVENVVTGSGNDDITASDAANVMDGGEGSDTYRFGS-------AAAANGDTIE 3504
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
F + + + + A V Q + + T D + V G
Sbjct: 3505 GFRPGDKIDLSAIDADAGQAGNQAFTLA-TGAAFTGVGQLLVTQETRDDGDYVVVQGNTA 3563
Query: 380 FESMKHF 386
++ F
Sbjct: 3564 GDASPEF 3570
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 2/111 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + ++++G G+D ++ +V +GND D G D F A
Sbjct: 3291 IAGGANGDVLNGTAGADTILGLDGDDNILAGGGADVVRAGAGNDFVDAGEGRDVVF--AG 3348
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ A +VY + + L A D+V + L
Sbjct: 3349 DGDDDVLSGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLF 3399
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
LN + + I G + + I + V +GND V +V F G+D G
Sbjct: 3300 LNGTAGADTILGLDGDDNILAGGGADVVRAGAGNDFVDAGEGRDVVFAGDGDDDVLSGGG 3359
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
D + + + + +D + E
Sbjct: 3360 ADMVYGDGGNDRILAGAGNDLVT----AGAGRDTVIGGE 3394
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV-------VIGNSANNVFFESSGNDVF 298
N E S T + + G++G+D+ + G N+ +GND+
Sbjct: 2221 NPEELFSAPTGVVGDTFTGTALNRTFNGTAGDDIANGADTALFGIQPNDTMNGGAGNDIL 2280
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAII 326
+G G DTF + ++
Sbjct: 2281 NGRGGNDTFIQVSTDGRDRVDGGAGTDT 2308
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 7/153 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG + N TI + + G +G+D + + ++ +G+D+ S DT +
Sbjct: 1316 VGGTDGNDTIITDFGDDGIWGDAGDDRIEAGAGVDLVNGGAGDDIITDSG--DTGDFLKG 1373
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYTASYEDL 371
+ N I + K V+ FA + D V + L +D
Sbjct: 1374 EDGNDVIANSNGIDILMGGRGKDAIFVGVDATEVFAGEGDDFVIGGDDADLLMGNEGDDW 1433
Query: 372 I---QVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ ++ + F+ + G D+ F
Sbjct: 1434 MEGGGGFDTTAGDNSELFFNSAIK-GHDVMFAG 1465
Score = 44.3 bits (103), Expect = 0.069, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 22/64 (34%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G++ D+V+G + NN +GND+ +G D + +
Sbjct: 2019 ANGTAAIDIVVGTAGNNTLSGGAGNDLVFAGAGNDNVLWRTGDGRDFVDGGAGTDSFRIM 2078
Query: 331 NEHK 334
N
Sbjct: 2079 NGTG 2082
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 11/127 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N + Q I+S G++ + + G++ NV G+D +G G D + +
Sbjct: 1847 TSTVAGNTGLQQTASIQSAFVGTAAAEDITGSATPNVILGRDGDDDIEGDVGNDAIYAGS 1906
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ ++ D L L + L
Sbjct: 1907 GDDRVDGGEGDDTLL----GNDGADTLIG------RTGNNTLDGGDDDDQLSGGHGNDRL 1956
Query: 372 IQVIGQD 378
I G D
Sbjct: 1957 IGGAGTD 1963
Score = 40.9 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 10/106 (9%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G + +V ++G D G G D + ++ A D
Sbjct: 3290 VIAGGANGDVLNGTAGADTILGLDGDDNILAGGGAD----------VVRAGAGNDFVDAG 3339
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D D ++ ++ + ++ G D+ +
Sbjct: 3340 EGRDVVFAGDGDDDVLSGGGADMVYGDGGNDRILAGAGNDLVTAGA 3385
>gi|109108472|ref|XP_001098589.1| PREDICTED: macrophage metalloelastase [Macaca mulatta]
Length = 470
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 61/197 (30%), Gaps = 47/197 (23%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET----- 73
R Q W ++I Y+ + T D+ + A WS V L F
Sbjct: 105 RGQIWRKHYITYRINNYTPDMNRKDVDY-------AIQKAFQVWSNVTPLKFSRINTGVA 157
Query: 74 --------SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNA 124
H D G + + +FD + W +GT L A
Sbjct: 158 DILVVFARGAHGDFHAFDGKGGTIAHAFGPGPGIGGDAHFDDDEFWT-THSEGTNLFLVA 216
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HE+GH+LGL H P + Y+ Y + A
Sbjct: 217 VHELGHSLGLGHSSD-----PKAIMFPTYK----------YVDINTFHLSA--------- 252
Query: 185 VSDIVAVQKIYGAPKGS 201
DI +Q +YG PK
Sbjct: 253 -DDIRGIQSLYGGPKEH 268
>gi|270012816|gb|EFA09264.1| matrix metalloproteinase 2 [Tribolium castaneum]
Length = 701
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 41/205 (20%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW-ALGEWSKVVDLTFEET-SIH 76
R + ++ + ++ LT S D+ ++P + AL W++ LTF E S
Sbjct: 176 RRKRFTLHGQKWPYTNLTWSLRSRDLMGMDPYQVRLVISKALDVWARHSKLTFTEVDSPK 235
Query: 77 SDI-----------KFISSNNGYVCTPRY--DSRYFMEINFDKADVWR--YGIGKGTILS 121
+DI F G + + + + ++++FD + W +GT L
Sbjct: 236 ADILIFFVRGEHGDNFPFDGKGVILAHAFFPNGGHSIDVHFDADEAWTTVPNSDEGTNLF 295
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ A HE GH+LGL H +M + + G+
Sbjct: 296 NVAAHEFGHSLGLSHSSEEGA-------------------LMYPW-----YKEMENGFDY 331
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNI 206
D + +Q +YGA L + I
Sbjct: 332 ELPDDDKLGIQALYGARTTRLWDRI 356
>gi|254425651|ref|ZP_05039368.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196188074|gb|EDX83039.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 838
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 6/190 (3%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--- 252
GA G I +P + + G + + + + I + S +
Sbjct: 219 GADINDGGEGIDTANFSDIGAP-VTALLGQGLASYVPASGVTVIDTLISIENLSGTENDD 277
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-FYY 310
+ G I + V G G+DV+ GN ++V GND +G +G DT F
Sbjct: 278 QLFGDRGTNVIDGGGGNDLVAGGGGDDVLQGNEGDDVLRGGGGNDTLNGGNGNDTADFSD 337
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +A V + + D LS++E L + +++ A +
Sbjct: 338 IGFEVTANLAQSSANYVVASGANVVDSLSNIENLSGSSNDDHLTGDDASNLIAGAAGDDT 397
Query: 371 LIQVIGQDVF 380
L+ G DV
Sbjct: 398 LLGGDGDDVL 407
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ G+++ + T+ G+D D + IG +L S + + N
Sbjct: 308 GNEGDDV------LRGGGGNDTLNGGNGNDTADFSDIGFE-VTANLAQSSANYVVASGAN 360
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + IE++ GSS +D + G+ A+N+ ++G+D G G D +
Sbjct: 361 VVDSLSN-IENLSGSSNDDHLTGDDASNLIAGAAGDDTLLGGDGDDVLRGDEIGDGTALV 419
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 5/172 (2%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTI-----AQHTVIESVVGSSGNDVVIGNSANN 287
L + ID ++ GG + + I A + + G G+D++ G + ++
Sbjct: 616 LGGLTAPGAMIDPVVGDFTQNGGEDLLLRITIDELAAQGGNDVIDGGLGDDLIEGGAGSD 675
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ G+DV G G DT + ++ N ++ A ++L
Sbjct: 676 LLAGGLGDDVLFGGKGDDTLRGDLNNRNPQVGVGGNDVLRGGAGNDAIGGKGGNDQLFGD 735
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
D IL A + L + E G + F
Sbjct: 736 DGDDLLFGDDGDDILTGGAGNDRLQGDDFSGGSGADTFVIEAGAGTDTIVDF 787
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I E + G+ GND++ G + GNDV G G D
Sbjct: 175 NAPIVGTAAAEELQGTEGNDILDGLGGGDTLVGLGGNDVLLGGGGADINDGGEGIDTANF 234
Query: 319 YRFENAII----------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ V + D L +E L + + ++++
Sbjct: 235 SDIGAPVTALLGQGLASYVPASGVTVIDTLISIENLSGTENDDQLFGDRGTNVIDGGGGN 294
Query: 369 EDLIQVIGQDVFES 382
+ + G DV +
Sbjct: 295 DLVAGGGGDDVLQG 308
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 56/179 (31%), Gaps = 44/179 (24%)
Query: 226 GGDDLLDLTL-----IGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGS-SGN 277
GG+D++D L GG + DL + G + + T+ + GN
Sbjct: 654 GGNDVIDGGLGDDLIEGGAGS--DLLAGGLGDDVLFGGKGDDTLRGDLNNRNPQVGVGGN 711
Query: 278 DVVIGNSANNVFFESSGNDVF--------------------------------DGSSGLD 305
DV+ G + N+ GND G SG D
Sbjct: 712 DVLRGGAGNDAIGGKGGNDQLFGDDGDDLLFGDDGDDILTGGAGNDRLQGDDFSGGSGAD 771
Query: 306 TFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
TF A + I F +I A + F D+ + +++ Q + L
Sbjct: 772 TFVIEAGAGTDTIVDFQLGTDLIGLGAGLSFAQLSLRGNSILFGDETLATLSGIQTASL 830
>gi|47522674|ref|NP_999070.1| matrix metalloproteinase-20 precursor [Sus scrofa]
gi|11386893|sp|P79287|MMP20_PIG RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|1800213|gb|AAB41396.1| matrix metalloproteinase [Sus scrofa]
Length = 483
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 62/197 (31%), Gaps = 51/197 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA-RWALGEWSKVVDLTFEET-SIHSDIK 80
W + Y+ T + P + A AL WS V L+F + +DI
Sbjct: 117 WKKNTLTYRISKYTPS--------MTPAEVDKAMEMALQAWSSAVPLSFVRVNAGEADIM 168
Query: 81 FISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHE 127
+ + +D + +FD A+ W G+ G L A HE
Sbjct: 169 ISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN-GFNLFTVAAHE 227
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GHALGL H + YP Y N Y F
Sbjct: 228 FGHALGLAHSTDPSALMYPTYKYQNPYG----------------------FHLP----KD 261
Query: 187 DIVAVQKIYGAPKGSLG 203
D+ +Q +YG K G
Sbjct: 262 DVKGIQALYGPRKTFTG 278
>gi|116254749|ref|YP_770585.1| calcium-binding domain-containing protein [Rhizobium leguminosarum
bv. viciae 3841]
gi|115259397|emb|CAK10534.1| putative calcium-binding cadherin-like RTX protein Exported via
PrsDE Type I secretion [Rhizobium leguminosarum bv.
viciae 3841]
Length = 589
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + + GS GND++ G + N+ +GND +G +G+DT +
Sbjct: 272 DVKTGGGSDEFTGTDGNDIFDGSGGNDIINGKAGNDKLTGGAGNDTINGGAGIDTAIFSG 331
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y N+ + + +D L+DVE +RFAD D
Sbjct: 332 NFVNYSF-ALNNSDHILTSALEGKDTLTDVEFVRFADGVYDFAKGTFTP 379
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 8/143 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQ 264
I + I +S + LL + L+ +DL E S ++ G + I
Sbjct: 12 TITKTGAEFESYDVIRNSEINPLLSVNLVISDSGTVDLADELGSGSANVTGSNGDNAITT 71
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G G D + G + N++ +GND DG G D + + +
Sbjct: 72 GAGNDNIDGGEGADTLNGGAGNDLLRGGNGNDTLDGGDGNDWLAGRDGNDILNGGDGNDQ 131
Query: 325 IIVYDANE-----HKQDFLSDVE 342
II N+ D +SD +
Sbjct: 132 IIDDVGNDVIRGGLGNDTISDGD 154
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 6/133 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSS-IGGYEK 258
++ + I DSG DL D + G + T + + I G E
Sbjct: 24 DVIRNSEINPLLSVNLVISDSGTVDLADELGSGSANVTGSNGDNAITTGAGNDNIDGGEG 83
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T+ + + G +GND + G N+ GND+ +G G D + + +
Sbjct: 84 ADTLNGGAGNDLLRGGNGNDTLDGGDGNDWLAGRDGNDILNGGDGNDQIIDDVGNDVIRG 143
Query: 319 YRFENAIIVYDAN 331
+ I DA
Sbjct: 144 GLGNDTISDGDAG 156
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 4/166 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + + G + ID + ++ G N + +++ G GND + G N
Sbjct: 62 GSNGDNAITTGAGNDNIDGGEGAD-TLNGGAGNDLLRGGNGNDTLDGGDGNDWLAGRDGN 120
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVYDANEHKQDFLSDV--ER 343
++ GND G D + V+D N D V +
Sbjct: 121 DILNGGDGNDQIIDDVGNDVIRGGLGNDTISDGDAGGRNPEVFDINAGDGDDAISVKGQG 180
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D ++ + T ++++ +G V S F F
Sbjct: 181 SGTIDGGAGIDTLQASELRGLTIKNIEVLETVGYWVAGSSAQFESF 226
>gi|295690414|ref|YP_003594107.1| FG-GAP repeat-containing protein [Caulobacter segnis ATCC 21756]
gi|295432317|gb|ADG11489.1| FG-GAP repeat protein [Caulobacter segnis ATCC 21756]
Length = 687
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 16/140 (11%)
Query: 227 GDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GD + ++ + D E+ S G + + G +G+D + G
Sbjct: 397 GDAGVSVSGGAAADALVGDARAETLSGQAGNDG------------LFGGAGDDTLNGGDG 444
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN---EHKQDFLSDVE 342
++ +G D DG + +D Y + Y I + V DA D L +VE
Sbjct: 445 ADILVGGAGADRIDGGADVDEARYGGLASEYAIGVTASGWTVSDARANPRDGADTLINVE 504
Query: 343 RLRFADQCIDSVNVKQRSIL 362
L FAD+ I + +
Sbjct: 505 NLVFADKTISLGDATVGLAI 524
>gi|28199957|ref|NP_780271.1| hemolysin-type calcium binding protein [Xylella fastidiosa
Temecula1]
gi|182682713|ref|YP_001830873.1| peptidase M23 [Xylella fastidiosa M23]
gi|28058088|gb|AAO29920.1| hemolysin-type calcium binding protein [Xylella fastidiosa
Temecula1]
gi|182632823|gb|ACB93599.1| Peptidase M23 [Xylella fastidiosa M23]
Length = 999
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 46/118 (38%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D ++ N I + + I G + N I + + + G +GND++ G
Sbjct: 794 WDEAAIKARVISNGDASNNTIIGYKDGSNRIYGLDGNDEIYGGALDDMLYGGAGNDMLSG 853
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ SGNDV G +G DT+ + + + +I ++ D Q +
Sbjct: 854 GKGADTLDGGSGNDVLYGGTGNDTYRFAIGAGVDRIEDYDTTTGNADVLSIGQGVSIN 911
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N G + + + + +I GND++IG N+ G+D+ DG +G D
Sbjct: 644 NEHYLPGTLGSDLLVGTSGNDLIRGGGNGEGNDILIGKGGNDELSGGLGDDILDGGTGND 703
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ Y++ + D++ + + +RFAD ++ +R +
Sbjct: 704 VLSGGTGNDTYRLAIGAGVDRIEDSDS----TPGNTDVVRFADVASTALTALERKDNDLV 759
Query: 366 ASY 368
Y
Sbjct: 760 IKY 762
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 67/241 (27%), Gaps = 49/241 (20%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTE---- 248
G GN+ Y++ + + G D++ + DL +
Sbjct: 706 SGGTGNDTYRLAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTG 765
Query: 249 -----------SWSSI-------------------------GGYEKNMTIAQHTVIESVV 272
+S G N I +
Sbjct: 766 DQLTISSYFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYKDGSNRIY 825
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND + G + +++ + +GND+ G G DT + + + +Y A
Sbjct: 826 GLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDV--LYGGTGNDTYRFAIG 883
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFESMKHFYEFGL 391
D + D + + + L + DL + +IG ++ +Y
Sbjct: 884 AGVDRIEDYDTTTGNADVLSIGQGVSINQLWFQHVGNDLEVSIIGTGDQITISDWYSNAA 943
Query: 392 S 392
Sbjct: 944 Y 944
>gi|292619299|ref|XP_002663942.1| PREDICTED: matrix metalloproteinase-25-like [Danio rerio]
Length = 573
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 72/199 (36%), Gaps = 45/199 (22%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ W+ I + + T+++P + +AL WS V +L F S
Sbjct: 113 YATTGLRWTKSDITWSVQNYPSVHKRLTPTQVDP----IISYALKAWSDVTNLNFYGASS 168
Query: 76 H----SDIKFISS----NNGYVCTPRYDS---RYFM-------EINFDKADVWRYGIGKG 117
+DI+ + ++GY + + +F + +FD ++W Y G
Sbjct: 169 SEKDRADIRISFARSLHDDGYPFDGKGGTLAHAFFPGESDVAGDTHFDDDEIWTYLDESG 228
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A+HE GHALGL + Y S V SY +P D
Sbjct: 229 TDLFAVAVHEFGHALGLS------HSSSSPSIMKPYYQGSVGD-VGSYILPDD------- 274
Query: 178 GYCATPMVSDIVAVQKIYG 196
D A+Q +YG
Sbjct: 275 ---------DREAIQSLYG 284
>gi|149203011|ref|ZP_01879982.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149143557|gb|EDM31593.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 844
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 8/152 (5%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
G+ GN++ + GDD L + ++ G N +
Sbjct: 624 GNGGNDVLGAGFGNDFVSGGNGNDVVAGGAGDDTLEGGDGNDSMSGSFGNDLIFGNGGAD 683
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IGG TI +SV G G+D + G N+ ND+ DG +G DT A
Sbjct: 684 DIGGGTGRDTIDAGAGNDSVGGGEGDDSISGGDGNDFLAGGGRNDIIDGGAGNDTINAGA 743
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + + + D ++D E
Sbjct: 744 GNDTITGGTGADQFVFSSFFDGEADVITDFED 775
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 19/202 (9%)
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD-----SGGDDLLDLTLI 236
T + +D+VA G ++ ++++ + D GG+D +D
Sbjct: 354 TAVTADLVAGSITQGGNTSTVNGTVFELRTGNEADSVTGGTADESFRVGGGNDTVDGGAG 413
Query: 237 GGVKNYID-----LNTESWSSIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVF 289
Y D +N + I N T+ IE + GS+GND++IG++ N
Sbjct: 414 FDRLRYDDFGVTAVNANLATGIVTGTANGVAFTDTISNIEWLRGSTGNDILIGDATANRL 473
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-------EHKQDFLSDVE 342
G+D G G DT + + V N DF + VE
Sbjct: 474 QGRDGDDRLVGGLGDDTIDGEGGTDTAVLAVARADTQVSVINGGIRIISSEGTDFFTSVE 533
Query: 343 RLRFADQCIDSVNVKQRSILEY 364
+F D I + ++ + +
Sbjct: 534 FFQFDDTLISAADLINGTGITG 555
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 83/239 (34%), Gaps = 19/239 (7%)
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
P +D S G+ TP + I+ A + N Y + D+ + T
Sbjct: 75 GPAADTVDLSLGFITTPQGTAIII------AFFDNSSNTDYVFRIGGDDTVILPTSVA-- 126
Query: 227 GDDLLDLTLIGGVKNYI-------DLNTESWSSIGG--YEKNMTIAQHTVIESVVGSSGN 277
G + LD ++ G + ++ S+ + ++++G +GN
Sbjct: 127 GFNALDASITNGGQVTFGPFAPNQNIQLTSFENTTSELLPDGELFTGTNGNDTLLGGTGN 186
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G ++V + GND DG +G D A S L + + D
Sbjct: 187 DTLNGLDGDDVLDGAGGNDTLDGGAGNDQLIGGAGSDLIRTGENNPDFGDFVVGGSGNDT 246
Query: 338 LSDVERLR-FADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFESMKHFYEFGLSEG 394
+ + FA+ ++ + ++ A+ + G D +++ G + G
Sbjct: 247 VDFGGLVDGFAEVSYGNLASAITATIDGAANTGTVDKGAQGFDTLLDVENPMLSGFANG 305
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 62/189 (32%), Gaps = 14/189 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIA 263
++ + I + GDD L D TL GG N ID ++I G + N T+
Sbjct: 546 DLINGTGITGEVIVGTDGDDSLIGTVNDDTLAGGDGNDNIDSGGGGNNNISGSDGNDTLF 605
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK------ 317
+S+ G G+D + GN N+V GND G +G D A +
Sbjct: 606 GGPGDDSIGGGLGDDTIFGNGGNDVLGAGFGNDFVSGGNGNDVVAGGAGDDTLEGGDGND 665
Query: 318 --IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
F N +I + + + + + + + L
Sbjct: 666 SMSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGNDSVGGGEGDDSISGGDGNDFLAGGG 725
Query: 376 GQDVFESMK 384
D+ +
Sbjct: 726 RNDIIDGGA 734
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 57/176 (32%), Gaps = 12/176 (6%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV---------- 280
D TLI I+ + I G + + ++ +++ G GND +
Sbjct: 537 FDDTLISAAD-LINGTGITGEVIVGTDGDDSLIGTVNDDTLAGGDGNDNIDSGGGGNNNI 595
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G+ N+ F G+D G G DT F + + F N + +
Sbjct: 596 SGSDGNDTLFGGPGDDSIGGGLGDDTIFGNGGNDVLGAG-FGNDFVSGGNGNDVVAGGAG 654
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ L D ++ +D+ G+D ++ G EG D
Sbjct: 655 DDTLEGGDGNDSMSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGNDSVGGGEGDD 710
>gi|120586977|ref|NP_001073357.1| matrix metalloproteinase-28 [Rattus norvegicus]
gi|119351063|gb|ABL63427.1| matrix metalloproteinase 28 [Rattus norvegicus]
Length = 525
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 57/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--TSIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GHKWYKQHLSYRLVNWPKSLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQNLYGKPLGRS 290
>gi|90417986|ref|ZP_01225898.1| putative hemolysin-type calcium-binding peroxidase protein
[Aurantimonas manganoxydans SI85-9A1]
gi|90337658|gb|EAS51309.1| putative hemolysin-type calcium-binding peroxidase protein
[Aurantimonas manganoxydans SI85-9A1]
Length = 3297
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + TI + +++ G +G+D ++G+ +++ +G+D+ +G +G DT
Sbjct: 1867 TITGGAGDDTIQGLSGNDTLNGGAGDDDLLGHGGDDILVGGAGSDIINGGAGNDTAVLDF 1926
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS---- 367
+ + + A +D L D+E++ F+D I + + I +
Sbjct: 1927 TVADATFFLTPSGSLEIAAGAD-EDELIDIEQVEFSDGQILTTRQAENRIANFQRGNGQD 1985
Query: 368 ---YEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
DL V+ D + +GRD+
Sbjct: 1986 NIINGDLDGVVADDTIRGLNGNDTISGGDGRDL 2018
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Query: 232 DLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ G N I+ + + +I G N TI+ + ++G G+D + G+ +++
Sbjct: 1977 NFQRGNGQDNIINGDLDGVVADDTIRGLNGNDTISGGDGRDLLLGDGGSDTLNGDEDDDI 2036
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND +G +G DT F++ + + +
Sbjct: 2037 LAGGRGNDTVNGGAGDDTVFWFTGDGRDSVNGGGGTDTLSINGDEGV 2083
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 18/139 (12%)
Query: 204 NNIYKIEVQQK----DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---WSSIGGY 256
+ +Y + + G+D LD I IDL + S
Sbjct: 3108 DTVYGGAGNDRFIARQGDGDDIYWGDAGNDTLDYAAIT-ANLTIDLGNGTMQHGSVHSSQ 3166
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I E+V+G +GND + +S NV GND F F A +
Sbjct: 3167 SGHDAIFG---FENVIGGAGNDEITASSVVNVMDGGGGNDTF-------VFRTAADADGD 3216
Query: 317 KIYRFENAIIVYDANEHKQ 335
+I F + + + +
Sbjct: 3217 RINGFASGDKIDLSGMNGS 3235
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 66/188 (35%), Gaps = 12/188 (6%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDLNTESWSS-IGGYEKN 259
G + + SGGD D + L G L S S I G
Sbjct: 3007 SGLAVTGTAAADVMMGGAEADVLSGGDGDDIILGGFGDDT----LMGGSGSDLIKGDAGR 3062
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + V+G + ND++ G++ ++ F G+D+ +G G DT + A + + I
Sbjct: 3063 DMIFGGAGDDVVLGGADNDMIFGDAGDDRMFGDDGDDMLEGGGGFDTVYGGAGNDRF-IA 3121
Query: 320 RFENAIIVY--DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY---TASYEDLIQV 374
R + +Y DA D+ + L + S +E++I
Sbjct: 3122 RQGDGDDIYWGDAGNDTLDYAAITANLTIDLGNGTMQHGSVHSSQSGHDAIFGFENVIGG 3181
Query: 375 IGQDVFES 382
G D +
Sbjct: 3182 AGNDEITA 3189
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 80/277 (28%), Gaps = 30/277 (10%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG--NNIYKIEVQQKDSPFIQTI 222
Y++ + D + SDI+A G G I++ + D+
Sbjct: 2915 YYLERFDNFDFYDNFIDGQEFSDIIA------RNTGLTGLPEEIFRANDENDDTADND-- 2966
Query: 223 YDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
D GDD D + + + ++ + + + + + ++G +
Sbjct: 2967 -DGVGDDTSDEDGDSDTVGEDNNDDTVVDDDDALAPVPPVVSGLAVTGTAAADVMMGGAE 3025
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
DV+ G +++ G+D G SG D A + + +++ A+
Sbjct: 3026 ADVLSGGDGDDIILGGFGDDTLMGGSGSDLIKGDAGRDMI-FGGAGDDVVLGGADNDMIF 3084
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ +R+ D + A + I G
Sbjct: 3085 GDAGDDRMFGDDGDDMLEGGGGFDTVYGGAGNDRFIARQGDGDDIYWGDAGN-------- 3136
Query: 397 ITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVK 432
D+ Y +L G+ + H G
Sbjct: 3137 ---DTLDYAAITANLTIDLGNGTMQHGSVHSSQSGHD 3170
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 7/164 (4%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGV-------KNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + I GDD++ G + I + + + G I
Sbjct: 1262 QGGQGVDLILGGSGDDVILDDGDSGNFIKGEDGDDVIANSAGPFDILMGGRGKDVIFVGP 1321
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V G G+D + G + + G+D +G G DT + + ++
Sbjct: 1322 DDTEVFGGEGDDFIAGGEGVDFLLGNEGDDWIEGGGGFDTTAGDNSDLFFDSKILGHDVM 1381
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+EH D S + + + + + + + + D
Sbjct: 1382 FAGNDEHDFDAESGDDIMVQGESVMRNEGMFGFDWATFQGNSLD 1425
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 49/167 (29%), Gaps = 13/167 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ ++ D+ F T S L++ ID+ +S
Sbjct: 1914 NGGAGNDTAVLDFTVADATFFLTPSGS-----LEIAAGADEDELIDIEQVEFSDGQILTT 1968
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNS-----ANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
I + +G D +I A++ +GND G G D S
Sbjct: 1969 RQA---ENRIANFQRGNGQDNIINGDLDGVVADDTIRGLNGNDTISGGDGRDLLLGDGGS 2025
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
++ + N+ D F DSVN +
Sbjct: 2026 DTLNGDEDDDILAGGRGNDTVNGGAGDDTVFWFTGDGRDSVNGGGGT 2072
Score = 41.3 bits (95), Expect = 0.57, Method: Composition-based stats.
Identities = 25/211 (11%), Positives = 60/211 (28%), Gaps = 50/211 (23%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + K I+ GDD++ +GG N + + G + +
Sbjct: 3044 DDTLMGGSGSDLIKGDAGRDMIFGGAGDDVV----LGGADNDMIFGDAGDDRMFGDDGDD 3099
Query: 261 TIAQHTVIESVVGSSGNDVVIG--NSANNVFFESSGNDVFD------------------- 299
+ ++V G +GND I +++++ +GND D
Sbjct: 3100 MLEGGGGFDTVYGGAGNDRFIARQGDGDDIYWGDAGNDTLDYAAITANLTIDLGNGTMQH 3159
Query: 300 --------------------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
G +G D + + + + A + D ++
Sbjct: 3160 GSVHSSQSGHDAIFGFENVIGGAGNDEITASSVVNVMDGGGGNDTFVFRTAADADGDRIN 3219
Query: 340 DV---ERLRFADQCIDSVNVKQRSILEYTAS 367
+++ + + ++L
Sbjct: 3220 GFASGDKIDLSGMNGSEGFTLETTVLTGAGQ 3250
>gi|318042959|ref|ZP_07974915.1| peptidase, metallopeptidase [Synechococcus sp. CB0101]
Length = 379
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 89/277 (32%), Gaps = 63/277 (22%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI-GKGTILSH 122
+ D+ F + D + ++G V S E +F + + G+ L +
Sbjct: 91 ALADVRF-----YLDTEINLGDSGGVTLGIALSNDTPERDFWEVMLNTPAFNGESDYLYY 145
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
ALHE+GH LGL HP + G ++ + ++M+Y P +
Sbjct: 146 AALHELGHTLGLEHPFDSSDGDVFVSANSS-RSAYPEETLMAYRSPLGDQ------WPIW 198
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+D+ A++ I+G G + P Q + + DD+L
Sbjct: 199 FSSNDLAALKAIWGEATG----------ADTQPKPLSQKLTGTSNDDVLT---------- 238
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
G SG D+++G N++ +D G
Sbjct: 239 ------------------------------GGSGPDLILGYFGNDILTGGRASDELWGDK 268
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
G + +F A + + N D ++
Sbjct: 269 GSNQYFSGADEATDWLLISRDGSSKPRRNRGTVDEIA 305
>gi|85715919|ref|ZP_01046897.1| Putative glycosyl transferase [Nitrobacter sp. Nb-311A]
gi|85697326|gb|EAQ35206.1| Putative glycosyl transferase [Nitrobacter sp. Nb-311A]
Length = 176
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 9/125 (7%)
Query: 399 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGR--NPDAFKALEYIASHEDLINA 455
FD YL +Y D+ S R + H+ + G EGR +P + Y+ ++ D+ A
Sbjct: 45 FDEDWYLTTYPDIAAAVSSTRFPSGWAHFRSVGYLEGRLGSPTIVDSEWYLETYPDVAQA 104
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLRNVFGSDRGA-AARHYI 511
+ + +HF NFG EGR D+ Y Y +R + A ++
Sbjct: 105 MLEGK--IASAAEHFENFGYAEGRLPSKPGVDARWYARRYMHVRKQDQDEEEKHAHEDFV 162
Query: 512 THGVK 516
G +
Sbjct: 163 RRGYR 167
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 10/127 (7%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF---DSYLYLGSYDDLR 496
F Y+ ++ D+ A + G HF + G EGR + DS YL +Y D+
Sbjct: 45 FDEDWYLTTYPDIAAAVSST--RFPSGWAHFRSVGYLEGRLGSPTIVDSEWYLETYPDVA 102
Query: 497 NV-FGSDRGAAARHYITHGVKEGRNPD--AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+AA H+ G EGR P A Y + + D + + +
Sbjct: 103 QAMLEGKIASAAEHFENFGYAEGRLPSKPGVDARWYARRYMHVRKQ--DQDEEEKHAHED 160
Query: 554 FSNFGYE 560
F GY
Sbjct: 161 FVRRGYR 167
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 364 YTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGR--DITF-DSYLYLGSYDDLRNV-FGSD 418
Y +Y D+ + F HF G EGR T DS YL +Y D+
Sbjct: 50 YLTTYPDIAAAVSSTRFPSGWAHFRSVGYLEGRLGSPTIVDSEWYLETYPDVAQAMLEGK 109
Query: 419 RGAAARHYITHGVKEGRNPD--AFKALEYIASH 449
+AA H+ G EGR P A Y +
Sbjct: 110 IASAAEHFENFGYAEGRLPSKPGVDARWYARRY 142
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR---SITFNPDLYLTSYDDLW 580
F Y+ ++ D+ A + +G HF + GY EGR + + YL +Y D+
Sbjct: 45 FDEDWYLTTYPDIAAAVSST--RFPSGWAHFRSVGYLEGRLGSPTIVDSEWYLETYPDVA 102
Query: 581 NVFGSDRSA-AAQHYITHGMKEGRALGISGM--QFKSVMNLSEKSRDKADLSLSFDHKKV 637
+ A AA+H+ G EGR G+ ++ + + + +D+ D ++
Sbjct: 103 QAMLEGKIASAAEHFENFGYAEGRLPSKPGVDARWYARRYMHVRKQDQ-------DEEEK 155
Query: 638 DLYTDYFGDG 647
+ D+ G
Sbjct: 156 HAHEDFVRRG 165
>gi|291570733|dbj|BAI93005.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1794
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 11/167 (6%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVV 272
+ ++IY GG+D + +GG N + + + G E N I +++
Sbjct: 1511 GTSIAESIYGRGGNDTI--FGMGGNDNL----EGGFGNNLLLGGEGNDFILGGPGNDTLY 1564
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +D+++G N+V + GND DG G D F L I I+Y
Sbjct: 1565 GGQDDDLLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDL--ILGGLGNDIIYGGQG 1622
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEY-TASYEDLIQVIGQD 378
+ + + L F +Q D + Q + Y + L+ + G +
Sbjct: 1623 NDTIDGGEGDDLIFGNQGDDYLQGNQGNDTIYGGQDNDTLLGIAGNN 1669
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 67/212 (31%), Gaps = 15/212 (7%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
IYG + I+ + + G+D + + TL GG + + L
Sbjct: 1518 IYGRGGN---DTIFGMGGNDNLEGGFGNNLLLGGEGNDFILGGPGNDTLYGGQDDDLLLG 1574
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E I G N TI + + G G+D+++G N++ + GND DG G D
Sbjct: 1575 GEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDLILGGLGNDIIYGGQGNDTIDGGEGDD- 1633
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ Y N I + ++ L V L
Sbjct: 1634 LIFGNQGDDYLQGNQGNDTIYGGQDNDTLLGIAGNNLLFGNLGNDLLVGGFASDTLYGGQ 1693
Query: 367 SYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
+ LI G D + G GRD
Sbjct: 1694 GNDTLIGGDGNDFLSGDKGDDVLIGGA--GRD 1723
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 20/198 (10%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSS--IG 254
+ +Y + I+ G+D +D + GG + DL + I
Sbjct: 1561 DTLYGGQDDDLLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGD--DLILGGLGNDIIY 1618
Query: 255 GYEKNMTIAQHTVIESVVGSSG---------NDVVIGNSANNVFFESSGNDVFDGSSGLD 305
G + N TI + + G+ G ND + G N+ +GN++ G+ G D
Sbjct: 1619 GGQGNDTIDGGEGDDLIFGNQGDDYLQGNQGNDTIYGGQDNDTLLGIAGNNLLFGNLGND 1678
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
S + + +I D N+ D + A + ++ Q +I ++
Sbjct: 1679 LLVGGFASDTLYGGQGNDTLIGGDGNDFLSGDKGDDVLIGGAGRDTFAIAYGQDTIADFE 1738
Query: 366 ASYEDLIQVIGQDVFESM 383
+ + D +
Sbjct: 1739 VGIDQIWITADLDPRQLA 1756
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 200 GSLGNNI-YKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
G LGN+I Y I+ + GDD L + T+ GG N L +
Sbjct: 1610 GGLGNDIIYGGQGNDTIDGGEGDDLIFGNQGDDYLQGNQGNDTIYGGQDNDTLLGIAGNN 1669
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N + +++ G GND +IG N+ G+DV G +G DTF
Sbjct: 1670 LLFGNLGNDLLVGGFASDTLYGGQGNDTLIGGDGNDFLSGDKGDDVLIGGAGRDTFAIAY 1729
Query: 312 PSYL 315
Sbjct: 1730 GQDT 1733
>gi|296196996|ref|XP_002746081.1| PREDICTED: interstitial collagenase isoform 1 [Callithrix jacchus]
Length = 471
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 64/210 (30%), Gaps = 55/210 (26%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 96 VPDVARFVLTEGNPRWEKTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 148
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + +DI N+ + + F + +FD+ ++W
Sbjct: 149 LTFTKVPKGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDEMWTNN 208
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDS 171
+ L A HE+GH+LGL H +M SY D
Sbjct: 209 F-REYNLYRVAAHELGHSLGLSHSTDIGA-------------------LMFPSYTFSGDV 248
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ DI +Q IYG +
Sbjct: 249 QLAQ----------DDINGIQAIYGRSQNP 268
>gi|254286327|ref|ZP_04961285.1| cadherin domain protein [Vibrio cholerae AM-19226]
gi|150423494|gb|EDN15437.1| cadherin domain protein [Vibrio cholerae AM-19226]
Length = 2195
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 92/264 (34%), Gaps = 41/264 (15%)
Query: 136 HPGSY--NGGYPVYGVDNDY-ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y GG + ++ + +N + S+ Y+ +++ + T + +D+V
Sbjct: 1893 HPNEYVGGGGVDSFLLNKTHGDNANLNISLSGYWEGGNALGNTVQNVGVT-IDTDLVIHS 1951
Query: 193 KIYGAPK-------GSLGNNIYKIEVQQKDSPF--------------IQTIYDSGG---D 228
G N +Y + I D G D
Sbjct: 1952 ---GDSNDYIELGISRADNTVYTGSSIPNSNNSTPPQSTLADSAFMKNDVITDQDGKLLD 2008
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+L + + + ++L + + ++ G N+ ++++G GND + G + N+
Sbjct: 2009 SVLKDSHLQPTTDTVNLGSGND-TVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDY 2067
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVER 343
GNDV G SG D + + E+ + ++ + DF ++
Sbjct: 2068 LSGGRGNDVLRGDSGNDILIGGLGNDILTGGSGEDLFKWVDGDLDNSKDRITDFTIGQDK 2127
Query: 344 L----RFADQCIDSVNVKQRSILE 363
+ F+D+ + ++E
Sbjct: 2128 IDLSDLFSDETRTLDQLLNSHVIE 2151
>gi|297690065|ref|XP_002822446.1| PREDICTED: interstitial collagenase-like isoform 1 [Pongo abelii]
Length = 469
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLYRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGPSQNP 266
>gi|194217260|ref|XP_001917946.1| PREDICTED: matrix metallopeptidase 28, partial [Equus caballus]
Length = 501
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 60/198 (30%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H P + R A WS V L F E + +
Sbjct: 108 GNKWYKQHLSYRLVNWPQHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 160
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 161 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDRDERWSLSRRRGRNLFVVLA 220
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 221 HEIGHTLGLSHSPAPRALMAPYYKKLGRDALLSW-------------------------- 254
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P+G
Sbjct: 255 -DDVLAVQSLYGKPQGGS 271
>gi|295092519|emb|CBK78626.1| hypothetical protein [Clostridium cf. saccharolyticum K10]
Length = 198
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFG 416
+ Y EDL G + + + HF G+ EGR F+ +Y + DL FG
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 176
Query: 417 SDRGAAARHYITHGVKEGR 435
+ A HY+ G E R
Sbjct: 177 DNLPAYYEHYMNFGYDENR 195
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
D FD+ Y +DL FG ++ H++T G+KEGR AF Y ++ DL+
Sbjct: 114 DRIFDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 173
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFV 481
AF D + +H+ NFG +E R
Sbjct: 174 AFGDN---LPAYYEHYMNFGYDENRIC 197
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F A+ Y +EDL AF + + +HF G +EGR + F+ +Y + DL
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDL---LNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 173
Query: 498 VFGSDRGAAARHYITHGVKEGR 519
FG + A HY+ G E R
Sbjct: 174 AFGDNLPAYYEHYMNFGYDENR 195
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFA 541
FD+ Y +DL FG ++ H++T G+KEGR +AF Y ++ DL+ AF
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 176
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D + A +H+ NFGY+E R
Sbjct: 177 DN---LPAYYEHYMNFGYDENR 195
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F A+ Y +EDL AF + +HF G +EGR S FN +Y + DL
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQE---DLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 173
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
FG + A +HY+ G E R
Sbjct: 174 AFGDNLPAYYEHYMNFGYDENR 195
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
F+ Y +DL+ FG ++ H++T GMKEGR N+S + A
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVA-------SEAFNISVYKENNA 169
Query: 627 DLSLSFDHKKVDLYTDYFGDG 647
DL +F Y Y G
Sbjct: 170 DLVQAFGDNLPAYYEHYMNFG 190
>gi|218661658|ref|ZP_03517588.1| Hemolysin-type calcium-binding region [Rhizobium etli IE4771]
Length = 679
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N S + + + + V + G GND + G N+ +G+D +G G D
Sbjct: 123 NNPSGVDVKTGDGDDVFSGSGVNDIFDGGGGNDFLAGEDGNDKLTGGAGDDQLNGGDGTD 182
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
T + Y + +V D L DVE +FAD D
Sbjct: 183 TAVFAGNFADYSLSVENFEKVVTSGL-EGTDTLQDVEFAQFADGVYDFDKNTFT 235
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 3/143 (2%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L ++ G V +L + S + + G + TI +++ G G D + G + N+
Sbjct: 280 TLVISDSGTVDLADELGSGS-ADVTGSSGDDTITTGAGNDTISGGDGADTLNGGAGNDHL 338
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD--FLSDVERLRFA 347
+GND+ +G +G D F + + + + I D D + +V +
Sbjct: 339 HGGTGNDMLNGGAGNDQIFGDGGNDVIRGGAGNDTITDGDVGNVSPDLGLVPEVLDIDAG 398
Query: 348 DQCIDSVNVKQRSILEYTASYED 370
D + ++ T + D
Sbjct: 399 DGSDVIIVQPFAPLISGTINGGD 421
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S G + I+ V +G+D G N++F + G DV +G +G+DT +
Sbjct: 488 LSDELGDRGAFITGYGSSID-VKAGNGDDEFAGTDGNDIFEGNGGYDVINGGAGIDTAVF 546
Query: 310 YAPSYLY---KIYRFEN-AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ Y IY E I+ + + +D L+DVE RFAD + S
Sbjct: 547 SSNFADYMLGVIYDNETHHIVTSMSGQDYEDVLTDVEFARFADGVYEFATQTFTSTNN 604
>gi|254226123|ref|ZP_04919720.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Vibrio cholerae V51]
gi|125621358|gb|EAZ49695.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Vibrio cholerae V51]
Length = 1637
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 16/140 (11%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
L+ +ID+ G + I ++ + G SGND + G N+
Sbjct: 1461 LSTAAFSTAHIDI-------AHGGGGDDRIYGQGGVDLMFGGSGNDQLYGGEGNDGLRGG 1513
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVERL--- 344
+GND DG +G D + + E+ + ++ + DF +++
Sbjct: 1514 TGNDTLDGGAGNDILIGGLGNDILTGGSGEDLFKWVDGDLDNSKDRITDFTIGQDKIDLS 1573
Query: 345 -RFADQCIDSVNVKQRSILE 363
F+D+ + ++E
Sbjct: 1574 DLFSDETRTLDQLLNSHVIE 1593
>gi|119351065|gb|ABL63428.1| matrix metalloproteinase 28 [Rattus norvegicus]
Length = 507
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 57/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--TSIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GHKWYKQHLSYRLVNWPKSLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQNLYGKPLGRS 290
>gi|255264091|ref|ZP_05343433.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
gi|255106426|gb|EET49100.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
Length = 664
Score = 74.4 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 14/189 (7%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSS-IGG 255
+ I+ TI G+D + T+ GG N I ++ + I G
Sbjct: 287 DTIFGQQGNDTIDGGSGNDTIDGGSGNDTIQGGTGQDTIEGGSGNDI-VDGGEGNDQISG 345
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
TI +++ G GND + G ++ G D + DT S L
Sbjct: 346 GSGEDTIDGGQGQDTLGGGEGNDTLTGGDGDDTLRGGLGEDTLNVGGDNDTAEGGFGSDL 405
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI-LEYTASYEDLIQV 374
+ + N I+ + D ++ L + ++ + + +E+ ++ +
Sbjct: 406 FVVTEAGNHTIIGGEDPDGSD----IDVLNLSGLNVNIIRTGPEAGRVEFLDDNGNVTRE 461
Query: 375 IGQDVFESM 383
+ E +
Sbjct: 462 LEYSEIEEV 470
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 23/154 (14%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D ++ GG ++ I G + N TI + +++ G SGND + G +
Sbjct: 276 GNDTING---GGGQDTI----------FGQQGNDTIDGGSGNDTIDGGSGNDTIQGGTGQ 322
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ SGND+ DG G D + D L+
Sbjct: 323 DTIEGGSGNDIVDGGEGNDQISGGSGEDTID----GGQGQDTLGGGEGNDTLTG------ 372
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L + G D+F
Sbjct: 373 GDGDDTLRGGLGEDTLNVGGDNDTAEGGFGSDLF 406
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + I + + +G D+ G +++ GND+ G +G +
Sbjct: 3 DIDGTPNDDQIQGTAEDDIINAGNGADIASGEGGDDLINGGEGNDILYGDAGENVVPGSD 62
Query: 312 PSYLYKIYRFENAIIVYDANEHKQD 336
+ L A + D
Sbjct: 63 ATPLTMAVGNVVAGSDTSTGNNAAD 87
Score = 44.0 bits (102), Expect = 0.083, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 26/72 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G++ +D++ + ++ G+D+ +G G D + A + +
Sbjct: 11 DQIQGTAEDDIINAGNGADIASGEGGDDLINGGEGNDILYGDAGENVVPGSDATPLTMAV 70
Query: 329 DANEHKQDFLSD 340
D +
Sbjct: 71 GNVVAGSDTSTG 82
>gi|325200728|gb|ADY96183.1| iron-regulated protein FrpA [Neisseria meningitidis H44/76]
Length = 1302
Score = 74.4 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 826 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 883
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 884 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 939
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 940 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKD 999
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1000 IIRFTDGITAD 1010
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1026 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1083
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1084 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1121
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1122 TLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1179
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1180 GEGFGQDTVYN 1190
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1086 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1145
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1146 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1205
Query: 390 GLS 392
+
Sbjct: 1206 KAA 1208
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 733 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 792
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 793 YATGRKDIIRFTDGITAD 810
>gi|301760460|ref|XP_002916079.1| PREDICTED: matrix metalloproteinase-19-like [Ailuropoda
melanoleuca]
Length = 547
Score = 74.4 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W + ++ L + A+ A WS V LTF E +DI
Sbjct: 103 GRWRKKHLTFRILNLPSTLPPHT-------ARAALLQAFRYWSNVAPLTFREVQAGWADI 155
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ ++W G G L A HE+
Sbjct: 156 RLSFHGRQSPYCSKPFDGPGRVLAHADIPELGSVHFDEDELWTEGTSGGVNLRIIAAHEL 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H Y + + A + D+
Sbjct: 216 GHALGLGHSR--------------------------YTQALMAPVYAGYRAHFKLHPDDV 249
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 250 AGIQALYG 257
>gi|281353246|gb|EFB28830.1| hypothetical protein PANDA_004065 [Ailuropoda melanoleuca]
Length = 455
Score = 74.4 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 58/188 (30%), Gaps = 45/188 (23%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W + ++ L + A+ A WS V LTF E +DI
Sbjct: 45 GRWRKKHLTFRILNLPSTLPPHT-------ARAALLQAFRYWSNVAPLTFREVQAGWADI 97
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ ++W G G L A HE+
Sbjct: 98 RLSFHGRQSPYCSKPFDGPGRVLAHADIPELGSVHFDEDELWTEGTSGGVNLRIIAAHEL 157
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H Y + + A + D+
Sbjct: 158 GHALGLGHSR--------------------------YTQALMAPVYAGYRAHFKLHPDDV 191
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 192 AGIQALYG 199
>gi|15676490|ref|NP_273629.1| putative iron-regulated protein FrpA [Neisseria meningitidis MC58]
gi|12230092|sp|Q9K0K9|FRPA_NEIMB RecName: Full=Iron-regulated protein frpA
gi|7225814|gb|AAF41013.1| putative iron-regulated protein FrpA [Neisseria meningitidis MC58]
Length = 1302
Score = 74.4 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 826 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 883
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 884 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 939
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 940 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKD 999
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1000 IIRFTDGITAD 1010
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1026 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1083
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1084 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1121
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1122 TLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1179
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1180 GEGFGQDTVYN 1190
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1086 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1145
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1146 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1205
Query: 390 GLS 392
+
Sbjct: 1206 KAA 1208
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 733 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 792
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 793 YATGRKDIIRFTDGITAD 810
>gi|209524242|ref|ZP_03272792.1| Integrin alpha beta-propellor repeat protein [Arthrospira maxima
CS-328]
gi|209495333|gb|EDZ95638.1| Integrin alpha beta-propellor repeat protein [Arthrospira maxima
CS-328]
Length = 803
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N I +++ G G+D + GN +++ F ++GND+ G G DT F
Sbjct: 57 IYGNQGNDQIFGGGGNDTLYGGQGDDYIEGNEGDDLIFGNAGNDILSGGPGNDTIFGGPG 116
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED 370
+ + N I D L E L D +++ + Y + +D
Sbjct: 117 NDVIDGDAGNNLIY----GGQGSDILRGGEGNDLILGDAGENTIFGGPGNDTLYGGTDDD 172
Query: 371 LIQ 373
I
Sbjct: 173 QIG 175
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 6/159 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ GG+D L G +YI+ N I G N ++ +++ G GNDV+
Sbjct: 66 IFGGGGNDTL---YGGQGDDYIEGNEGDD-LIFGNAGNDILSGGPGNDTIFGGPGNDVID 121
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G++ NN+ + G+D+ G G D A I+ +Y + Q
Sbjct: 122 GDAGNNLIYGGQGSDILRGGEGNDLILGDAGEN--TIFGGPGNDTLYGGTDDDQIGGGLG 179
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L D ++ + Y DLI +
Sbjct: 180 NDLILGGSGDDIISGGEGDDTIYGGLGNDLILADEGNNI 218
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 67/204 (32%), Gaps = 28/204 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD--------------LTLIGGVKNYIDL 245
G+ GN+I P TI+ G+D++D L GG N + L
Sbjct: 95 GNAGNDI------LSGGPGNDTIFGGPGNDVIDGDAGNNLIYGGQGSDILRGGEGNDLIL 148
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++I G N T+ T + + G GND+++G S +++ G+D G G D
Sbjct: 149 GDAGENTIFGGPGNDTLYGGTDDDQIGGGLGNDLILGGSGDDIISGGEGDDTIYGGLGND 208
Query: 306 --------TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + N V +A + F + +
Sbjct: 209 LILADEGNNILFGNSGSNTLVGGTGNDTFVLEAGNGWTTIADTDQIFDFTPGQDTILLLG 268
Query: 358 QRSILEYTASYEDLIQVIGQDVFE 381
I + +D I + E
Sbjct: 269 DAPIDQLNIILDDTNPNINNTILE 292
>gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
CS-505]
gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
CS-505]
Length = 9381
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 7/162 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
+ + I G+D L GG I LN + I G N I
Sbjct: 8094 NDNLEGNAGNDQIDGGSGNDYL----QGGEGADI-LNGGMGNDTIEGNGGNDQIDGGDGN 8148
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G+ ND + G N++ +G+D+ +G G D F++ + S + N
Sbjct: 8149 DILLGNEDNDWLTGQVGNDILIGGTGDDILNGGEGADVFYFSSKSEGFDTILDFNPEQGD 8208
Query: 329 DANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYE 369
K F +++ RF +D I +Y
Sbjct: 8209 KIQVSKSGFAVNNLDGFRFISGVLDFQGQNLALIQNDGRTYS 8250
Score = 72.5 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 16/171 (9%)
Query: 199 KGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+G++G++ + + + +D+ G D + + GG + I L G
Sbjct: 8035 EGTIGDDSFIAADGNDKLEGSYGNDFFDAKGGDDI---VNGGYGDDILL---------GG 8082
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E + I +++ G++GND + G S N+ G D+ +G G DT +
Sbjct: 8083 EGDDWITGGHGNDNLEGNAGNDQIDGGSGNDYLQGGEGADILNGGMGNDTIEGNGGNDQI 8142
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ ++ + N+ + + + D +N + + + Y +S
Sbjct: 8143 DGGDGNDILLGNEDNDWLTGQVGN--DILIGGTGDDILNGGEGADVFYFSS 8191
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 20/169 (11%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + + GS GND +++ G+D+ G G D
Sbjct: 8033 TLEGTIGDDSFIAADGNDKLEGSYGNDFFDAKGGDDIVNGGYGDDILLGGEGDDWITGGH 8092
Query: 312 PSYLYKIYRFENAIIVYDANEH--------------KQDFL---SDVERLRFADQCIDSV 354
+ + + I N++ D + +++ D +
Sbjct: 8093 GNDNLEGNAGNDQIDGGSGNDYLQGGEGADILNGGMGNDTIEGNGGNDQIDGGDGNDILL 8152
Query: 355 NVKQRSILEYTASYEDLIQVIGQDV---FESMKHFYEFGLSEGRDITFD 400
+ L + LI G D+ E FY SEG D D
Sbjct: 8153 GNEDNDWLTGQVGNDILIGGTGDDILNGGEGADVFYFSSKSEGFDTILD 8201
>gi|320104294|ref|YP_004179885.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
gi|319751576|gb|ADV63336.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
Length = 314
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 11/181 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ +E IQ + D G G+D +DL GG+ ++GG E +
Sbjct: 73 GNDRVLVERNGAAGFAIQLVIDGGDGNDTIDLRRFGGIAAV---------AVGGGEGDDL 123
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ G G D + G + ++ GND G G D + + F
Sbjct: 124 IYGSSSNDNLFGDDGEDTIYGGAGSDRIDGGDGNDRLLGGPGNDEIRGGLGND-FMSGDF 182
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N I++ + + ++L + ++ + L G D +
Sbjct: 183 GNDILMGASGDDTIRGGPGNDQLLGEADNDLLFGDEGNDLIRGGDGNDTLNGGSGADTLD 242
Query: 382 S 382
Sbjct: 243 G 243
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 7/131 (5%)
Query: 203 GNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSSI-GG 255
+ IY TIY G D +D G ++ + G
Sbjct: 121 DDLIYGSSSNDNLFGDDGEDTIYGGAGSDRIDGGDGNDRLLGGPGNDEIRGGLGNDFMSG 180
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + + +++ G GND ++G + N++ F GND+ G G DT + +
Sbjct: 181 DFGNDILMGASGDDTIRGGPGNDQLLGEADNDLLFGDEGNDLIRGGDGNDTLNGGSGADT 240
Query: 316 YKIYRFENAII 326
N II
Sbjct: 241 LDGGSGVNRII 251
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 7/137 (5%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY + + G+D + + + G N I + +I G
Sbjct: 140 DTIYGGAGSDRIDGGDGNDRLLGGPGNDEIRGGLGNDFMSGDFGNDILMGASGDDTIRGG 199
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + + + G GND++ G N+ SG D DG SG++
Sbjct: 200 PGNDQLLGEADNDLLFGDEGNDLIRGGDGNDTLNGGSGADTLDGGSGVNRIIPGPGRQKV 259
Query: 317 KIYRFENAIIVYDANEH 333
I I A
Sbjct: 260 IIPSGTTGITSASARNE 276
>gi|312097504|ref|XP_003148996.1| matrixin family protein [Loa loa]
gi|307755839|gb|EFO15073.1| matrixin family protein [Loa loa]
Length = 344
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 92/273 (33%), Gaps = 53/273 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
W + Y + LT ++ +E + A WS V LT E S DI
Sbjct: 74 WKKNDLTYSIESLTNELSESEV-------REALKKASDTWSAVTRLTLNEISQKGDITVA 126
Query: 83 S-----------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG------TILSHNAL 125
G V + ++FD + W Y K T + A+
Sbjct: 127 FARRMHDDPWPFDGEGGVLAHATLPSSGI-LHFDSDEKWVYMNPKAIISYNTTDVLQVAV 185
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY-CATPM 184
HEIGH LGL H + S+M+ F + +D S Y
Sbjct: 186 HEIGHVLGLEHSSDSD-------------------SIMAPFYRE--AIDNSGNYIIPKLS 224
Query: 185 VSDIVAVQKIYGAP--KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
SDI +Q +YG K + N ++ T DS D +D+ V
Sbjct: 225 ASDITNIQYLYGINDKKSNRQNPTAGY-GNDFETDLSNTDNDSSSDRKIDINCPDEVDGI 283
Query: 243 I--DLNTESWSSIGGYE-KNMTIAQHTVIESVV 272
I D + +S YE N I + +++++
Sbjct: 284 ITTDGSNYLFSGNKVYEFGNTGIRKEYLLKNLF 316
>gi|126659167|ref|ZP_01730306.1| outer membrane secretion protein [Cyanothece sp. CCY0110]
gi|126619574|gb|EAZ90304.1| outer membrane secretion protein [Cyanothece sp. CCY0110]
Length = 532
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 241 NYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
++ S++ + G N T+A +++ G++GND++ G++ N++ +GND+ +
Sbjct: 328 AQFNVIGTSFNDNLFGKSGNDTLAGGAGNDTLNGAAGNDILTGDAGNDILNGGTGNDILN 387
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G +G DT A + F V + DF +RL + + + +
Sbjct: 388 GGAGNDTLTGGAGNDNLIFGGFSGFGDV--GIDTITDFTKGSDRLLLSQKTFNQLTRNGD 445
Query: 360 SIL 362
L
Sbjct: 446 LTL 448
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 47/135 (34%), Gaps = 12/135 (8%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD------- 299
S +I G E N TI E + G GND + N + + GNDV
Sbjct: 29 PTSLPTIIGTEGNDTIPGTIFDEIIYGRGGNDTIYSNGGVDEIYGEEGNDVIYTQFGYAN 88
Query: 300 GSSGLDTFFYYAPSYLYKI---YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G SG+DT +Y I +R + IV + + + ER D +
Sbjct: 89 GGSGIDTLVADYTNYHTGIQLTHRSFVSDIVTRSGAVEVLTGLNFERFNITGTQFDDILN 148
Query: 357 --KQRSILEYTASYE 369
I+ A +
Sbjct: 149 GRGDTDIINGGAGND 163
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 75/240 (31%), Gaps = 31/240 (12%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY--KIEVQQKDSPFIQTIYDSG-G 227
+ ++ DI+ + G GN+I + + I D G G
Sbjct: 129 TGLNFERFNITGTQFDDILNGRGDTDIINGGAGNDIISNGSYLDPVPNGGGYDILDGGIG 188
Query: 228 DDLLDLTL-IGGVKNYIDLNTESW---SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D L L ++L +++ S+ +N ++++ SGND +I N
Sbjct: 189 YDRLSLYFAFVNTDVTLNLTVQNFQLQSNTTAQVRNFE-----ELDTIWLGSGNDTIIAN 243
Query: 284 SANNV-----FFESSGNDVF-------------DGSSGLDTFFYYAPSYLYKIYRFENAI 325
AN +GND DG SG +T + + + + I
Sbjct: 244 GANTSGVIKNIRTGAGNDTIKLFFTNNIFDREVDGESGNNTLILDYSNATHGNFVNGSGI 303
Query: 326 IVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + Q LR+ + + + L + + L G D
Sbjct: 304 NMPNNSSVIQTLSGSQIILRYNNIAQFNVIGTSFNDNLFGKSGNDTLAGGAGNDTLNGAA 363
Score = 42.0 bits (97), Expect = 0.37, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 46/162 (28%), Gaps = 23/162 (14%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-SSIGGYEKNMTI 262
+ IY E G D L + I L S+ S I + +
Sbjct: 69 DEIYGEEGNDVIYTQFGYANGGSGIDTL-VADYTNYHTGIQLTHRSFVSDIVTRSGAVEV 127
Query: 263 AQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDV------------------FDGSS 302
E ++ G+ +D++ G ++ +GND+ DG
Sbjct: 128 LTGLNFERFNITGTQFDDILNGRGDTDIINGGAGNDIISNGSYLDPVPNGGGYDILDGGI 187
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
G D Y + + + + + + E L
Sbjct: 188 GYDRLSLYFAFVNTDVT-LNLTVQNFQLQSNTTAQVRNFEEL 228
>gi|320325880|gb|EFW81940.1| hypothetical protein PsgB076_04646 [Pseudomonas syringae pv.
glycinea str. B076]
Length = 774
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 78/245 (31%), Gaps = 36/245 (14%)
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
Y ++ G+ ++H+ G G + F + Y D++ V H
Sbjct: 30 YTYQLKKAGKKTKNPVEHYLLEGCKIGLEPHPCFVTDFYFEHNKDVQEVNAH----PFIH 85
Query: 426 YITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
++ +G KE R + F Y ++ G + F +F + G+
Sbjct: 86 FVMYGYKENRLTREGFSLSRYREQRPEIEK----------TGANPFKHFTKKYGQHQPVP 135
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ + L + +D + + + G F + Y +
Sbjct: 136 NLVEAPQQIKLPQLSATDIKSLSEQAVQLG--------LFDSQWYSERYGK------QFD 181
Query: 545 DLVQAGKDHFSNFGYEE-GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
A D+ + S F+ + Y D+++ + + HY+ G +EGR
Sbjct: 182 SSENAFADYLKKSRFSPVNPSNYFDTETYHRMNTDVYHA----QISPLYHYLISGRQEGR 237
Query: 604 ALGIS 608
+
Sbjct: 238 TYHAN 242
>gi|300312185|ref|YP_003776277.1| calcium binding secreted hemolysin protein [Herbaspirillum
seropedicae SmR1]
gi|300074970|gb|ADJ64369.1| calcium binding secreted hemolysin protein [Herbaspirillum
seropedicae SmR1]
Length = 984
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 72/197 (36%), Gaps = 26/197 (13%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D+L I+ N I G + + T+ T G + NDV+ G +
Sbjct: 410 GAGNDVL----FATNGEEINGNGGDDV-IYGGDGDDTLVGGTYSALARGETDNDVLYGGA 464
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----- 339
+ GND+ DG +G D + A +Y + + + +A+ + L+
Sbjct: 465 GKDSLSGGVGNDLLDGGTGDDRMYGGAGDDIYVVDSAGDG-VFENADAGRDTVLAGMSTT 523
Query: 340 ---DVERLRFADQCIDSVNVK----------QRSILEYTASYEDLIQVIGQDV--FESMK 384
+VE LR + + Q +IL+ A + ++ G D +++
Sbjct: 524 LGENVEDLRLLEGGSYNGTGNFLDNRLTGNSQDNILDGLAGADTMMGGQGNDRYFVDNVG 583
Query: 385 HFYEFGLSEGRDITFDS 401
EG D + +
Sbjct: 584 DQVIEEAGEGIDTVYST 600
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 13/90 (14%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+ +++++GN NN+ + GND G +G DT+ + + +
Sbjct: 829 ATGNELDNILVGNQDNNLLTGAKGNDTLTGQAGNDTYVFGKGDGRDLVVDQDA------- 881
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+++ ++F+D ++ Q
Sbjct: 882 ------TAGNIDTIKFSDARQTNLWFSQVG 905
>gi|157818219|ref|NP_001099638.1| matrix metallopeptidase 15 [Rattus norvegicus]
gi|149032397|gb|EDL87288.1| rCG39153 [Rattus norvegicus]
Length = 657
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 67/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + WSNY + + T ++ E R A W +V L F+E
Sbjct: 128 YTLTGKTWSNYHLTFSIQNYTEKLGWYNS-------MEAVRRAFQVWEQVTPLVFQEVPY 180
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 181 DDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADEPWTFS 240
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + +M+ F
Sbjct: 241 STDLHGISLFLVAVHELGHALGLEHSSNPSA-------------------IMAPFYQWMD 281
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D+ +Q++YG+P G
Sbjct: 282 TDNFQ------LPEDDLRGIQQLYGSPDG 304
>gi|153791308|ref|NP_001093408.1| macrophage metalloelastase [Sus scrofa]
gi|149693281|emb|CAO00953.1| Mmp12 protein [Sus scrofa]
Length = 466
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 67/182 (36%), Gaps = 27/182 (14%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-- 79
W +F+ Y+ + T D+ + A WS V L F + + +DI
Sbjct: 109 WKKHFLTYRINNYTPDMRPKDVDY-------AIQKAFQAWSNVTPLKFRKIDAGEADIMI 161
Query: 80 KFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSHNALHEI 128
KF +G + + +FD+A++W KGT L ALHE+
Sbjct: 162 KFALGEHGDFNSFDGQGGVLAHAFAPGPGIGGDAHFDEAEIWTKN-NKGTNLFLVALHEL 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDY---ENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
GH+LGL H Y N + +D + S + P + +S + P
Sbjct: 221 GHSLGLGHSNDPTAIMFPYINYNSFHLSADDIRG--IQSLYGPPEKHQPSSNPDSSDPAA 278
Query: 186 SD 187
D
Sbjct: 279 CD 280
>gi|299068226|emb|CBJ39445.1| Putative calcium binding hemolysin protein (modular protein)
[Ralstonia solanacearum CMR15]
Length = 1944
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 74/235 (31%), Gaps = 23/235 (9%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S +V YF + +D T D+ A++ + P +N+Y
Sbjct: 1273 NGSDRVTVQYYFSSDATSPYRIDQVRFADGT--SWDVAAIKALVQVPTSGT-DNLYGYAS 1329
Query: 212 QQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ GG+D L ++ G + N +I +
Sbjct: 1330 DDVLNGLDGNDALRGYGGNDTLRG-------------DAGADTLSGGDGNDSIDGGADND 1376
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-- 327
+ G +G+D ++G S N+ + +GND +G SG D S Y +
Sbjct: 1377 YLYGEAGDDSLLGGSGNDTLYGGAGNDTLEGGSGNDYLTGEGGSDTYVFNSGWGQDTIGN 1436
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
YD + D ++ + + +D L + + D
Sbjct: 1437 YDTTTGRSDVIAFGDGIAASDIVATRSGEDLILSLRNSTDRVTVQYYFSSDATSP 1491
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 73/201 (36%), Gaps = 23/201 (11%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S +V YF + +D T D+ AV+ + P +N+Y
Sbjct: 873 NSSDKITVQYYFSSDATGPYRVDQVRFADGT--SWDVAAVKALVQVPASG-DDNLYGYAS 929
Query: 212 QQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ TI GG+D L ++ G + N I +
Sbjct: 930 DDVLNGLAGNDTIRGYGGNDTLHG-------------DAGADTLSGGDGNDIIDGGADND 976
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-- 327
+ G +G+D ++G S N+ + +GND +G +G D S Y +
Sbjct: 977 YLYGEAGDDSLLGGSGNDTLYGGNGNDTLEGGAGNDYLTGEGGSDTYVFNSGWGQDTIGN 1036
Query: 328 YDANEHKQDFLSDVERLRFAD 348
YDA+ + D ++ + + +D
Sbjct: 1037 YDASSGRSDVIAFGDGIAASD 1057
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 71/201 (35%), Gaps = 23/201 (11%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N + +V YF + +D T D+ AV+ + P +N+Y
Sbjct: 1473 NSTDRVTVQYYFSSDATSPYRVDQVRFADGT--SWDVAAVKALVQVPTSGA-DNLYGYAS 1529
Query: 212 QQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI GG+D L ++ G + N ++ +
Sbjct: 1530 DDVLNGLDGNDTIRGYGGNDTLRG-------------DAGADTLSGGDGNDSVDGGADND 1576
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-- 327
+ G +G+D ++G S N+ + +GND +G SG D S Y +
Sbjct: 1577 YLYGETGDDSLLGGSGNDTLYGGAGNDTLEGGSGNDYLTGEGGSDTYVFNSGWGQDTIGN 1636
Query: 328 YDANEHKQDFLSDVERLRFAD 348
YD+ + D ++ + + D
Sbjct: 1637 YDSTSGRSDVITFGDGIAATD 1657
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 72/191 (37%), Gaps = 12/191 (6%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N + +V YF + +D T D+ AV+ + P +N+Y
Sbjct: 1673 NSTDRVTVQYYFSSDATGPYRIDQVRFADGT--SWDVAAVKALVQVPASG-DDNLYGYAS 1729
Query: 212 QQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ GG+D L D N SI G N + +
Sbjct: 1730 DDVLNGLAGNDTLRGYGGNDTLRGDAGADTLFGGDGND----SIDGGADNDYLYGEAGDD 1785
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S++G SGND + G + N+ +GND +G+ G DT+ + + IY ++ + D
Sbjct: 1786 SLLGGSGNDNLYGGNGNDTLKGGAGNDYLNGNEGSDTYVFNSGWGQDTIYNYDTSSGRSD 1845
Query: 330 ANEHKQDFLSD 340
D +D
Sbjct: 1846 VIAFGDDIATD 1856
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 17/232 (7%)
Query: 155 NDSFLTSVMSYFMPQDSMM-DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
N S +V YF + A DI V + +N+Y
Sbjct: 1073 NSSDKVTVQYYFSGDGTGAYRVDLIRFADGTTWDIKTVSAK-TIGATNAADNLYGYATDD 1131
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVV 272
+ + GG+D + GG L ++ + + G + N +I + +
Sbjct: 1132 EINGL-------GGNDTIR--GYGGNDT---LRGDAGADTLSGGDGNDSIDGGADNDYLY 1179
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDA 330
G +G+D ++G S N+ + +GND +G SG D S Y + YDA
Sbjct: 1180 GETGDDSLLGGSGNDTLYGGNGNDTLEGGSGNDYLTGEGGSDTYVFNSGWGQDTIGNYDA 1239
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + D + + D + + + D
Sbjct: 1240 STGRSDVIEFGSGIAATDVIATRSGEDLILSIRNGSDRVTVQYYFSSDATSP 1291
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 68/193 (35%), Gaps = 21/193 (10%)
Query: 162 VMSYF--MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
V SYF S + + + V D+ V+ + P +N+Y +
Sbjct: 680 VQSYFNTDGASSYLVENLKFADG-TVWDVSTVKALVQIPTSG-DDNLYGYASDDVLNGLA 737
Query: 220 --QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI GG+D L + G + N +I + + G +G+
Sbjct: 738 GNDTIRGYGGNDTLRGDAGNDA-------------LSGGDGNDSIDGGADNDYLYGEAGD 784
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDANEHKQ 335
DV+ G S N+ + +GND +G +G D S Y + YDA+ +
Sbjct: 785 DVLQGGSGNDTLYGGNGNDTLEGGAGNDYLTGEGGSDAYVFNSGWGQDTIGNYDASSGRS 844
Query: 336 DFLSDVERLRFAD 348
D + + D
Sbjct: 845 DVIEFGSGIAATD 857
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 244 DLNTESWSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+L S + + + +V GND V G++ N+ SGND G +
Sbjct: 557 NLTGTSLPDLLVGTNTVDYLYGRDGNDVLVAKGGNDYVYGDAGNDTLDGGSGNDYLSGGT 616
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G DT+ + S IY ++ + +A+
Sbjct: 617 GADTYLFGKGSAQDTIYNYDGEAVGTNADT 646
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 39/109 (35%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG++ D + G N+V GND G +G DT + + + +
Sbjct: 565 DLLVGTNTVDYLYGRDGNDVLVAKGGNDYVYGDAGNDTLDGGSGNDYLSGGTGADTYLFG 624
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + D E + I + + T S +DLI I
Sbjct: 625 KGSAQDTIYNYDGEAVGTNADTILLGTDITSTDVTLTRSGDDLIIRING 673
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 6/130 (4%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+SG D + G ++++V GND G G DT A + ++I N++
Sbjct: 1318 TSGTDNLYGYASDDVLNGLDGNDALRGYGGNDTLRGDAGADTLSGGDGNDSIDGGADNDY 1377
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D + L LE + + L G D + + G +
Sbjct: 1378 LYGEAGD-DSLLGGSGNDTLYGGAGNDTLEGGSGNDYLTGEGGSDTYV-----FNSGWGQ 1431
Query: 394 GRDITFDSYL 403
+D+
Sbjct: 1432 DTIGNYDTTT 1441
Score = 41.3 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 75/251 (29%), Gaps = 16/251 (6%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y G + A ++G KGS + IY + + + +
Sbjct: 593 YVYGDAGNDTLDGGSGNDYLSGGTGADTYLFG--KGSAQDTIYNYDGEAVGTNADTILLG 650
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG-------- 276
+ G I +N + N A ++E++ + G
Sbjct: 651 TDITSTDVTLTRSGDDLIIRINGTDDTLRVQSYFNTDGASSYLVENLKFADGTVWDVSTV 710
Query: 277 -NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
V I S ++ + + +DV +G +G DT Y + + +A+ D N+
Sbjct: 711 KALVQIPTSGDDNLYGYASDDVLNGLAGNDTIRGYGGNDTLRGDAGNDALSGGDGNDSI- 769
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD----VFESMKHFYEFGL 391
D +D + L L + L G D S + + G
Sbjct: 770 DGGADNDYLYGEAGDDVLQGGSGNDTLYGGNGNDTLEGGAGNDYLTGEGGSDAYVFNSGW 829
Query: 392 SEGRDITFDSY 402
+ +D+
Sbjct: 830 GQDTIGNYDAS 840
>gi|159186153|ref|NP_356242.2| rhizobiocin/RTX toxin [Agrobacterium tumefaciens str. C58]
gi|159141287|gb|AAK89027.2| rhizobiocin/RTX toxin [Agrobacterium tumefaciens str. C58]
Length = 1937
Score = 74.0 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 4/140 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D++D G N + E + G N + + + G GND + G S
Sbjct: 1781 GSGNDMVD----AGSGNDRVIAGEGDDVVDGGPGNDVLMGGAGNDVLYGGDGNDEISGGS 1836
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ +GNDV G SG DTF + S + F+ D E ++ +D L
Sbjct: 1837 GNDTLSGGAGNDVLTGGSGADTFVFATGSGRDVVTDFQAGADGKDVVELSKEVFADYRAL 1896
Query: 345 RFADQCIDSVNVKQRSILEY 364
+ D + Q + +
Sbjct: 1897 IASGSFTDGEDGAQIAFKDG 1916
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 72/246 (29%), Gaps = 26/246 (10%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKI-YGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
F D + A + D A + Y + G + V +
Sbjct: 1694 FSLVDGKLVADPSSAFAKLEDDQQATVTLTYTVRDANGGESTGTTTVTVDGYTEYNIVEG 1753
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
S G D+L T + D+ + N + + + V+ G+DVV G
Sbjct: 1754 SDGADVLIGT------SRKDMIEGGAGDDRLSAGSGNDMVDAGSGNDRVIAGEGDDVVDG 1807
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-------IYRFENAIIVYDANEHKQ 335
N+V +GNDV G G D + + + A A +
Sbjct: 1808 GPGNDVLMGGAGNDVLYGGDGNDEISGGSGNDTLSGGAGNDVLTGGSGADTFVFATGSGR 1867
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D ++D Q E A Y LI F + + +G
Sbjct: 1868 DVVTDF-------QAGADGKDVVELSKEVFADYRALIAS---GSFTDGEDGAQIAFKDGS 1917
Query: 396 DITFDS 401
ITFD
Sbjct: 1918 TITFDG 1923
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + +A T +++ G +GND + G+ +++ G+D +G G D
Sbjct: 1297 LDGGAGDDALAGGTGNDALSGGAGNDELWGDDGDDMIAGGLGDDFIEGGRGNDLLIGGDG 1356
Query: 313 SYLYKIYRFENAIIV--YDANEHKQDFLS 339
S Y+ R + + ++ + D LS
Sbjct: 1357 SDRYRYGRGDGSDVIVETASASGSVDRLS 1385
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 51/158 (32%), Gaps = 9/158 (5%)
Query: 241 NYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+DL + + I G + E++ G GND + G ++ +G+D
Sbjct: 1248 TVVDLKSGLEVNRIVGTNGADVLVGTAAAETMFGLEGNDELQGFGGDDRLDGGAGDDALA 1307
Query: 300 GSSGLDTFFYYAPS-----YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
G +G D A + + D L + +D+
Sbjct: 1308 GGTGNDALSGGAGNDELWGDDGDDMIAGGLGDDFIEGGRGNDLLIGGD---GSDRYRYGR 1364
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
I+E ++ + ++ D+ S ++G S
Sbjct: 1365 GDGSDVIVETASASGSVDRLSLYDIDRSEAVLRKYGQS 1402
>gi|73966944|ref|XP_548256.2| PREDICTED: similar to matrix metalloproteinase 28 preproprotein
isoform 1 [Canis familiaris]
Length = 520
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 59/198 (29%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H P + R A WS V L F E ++ +
Sbjct: 127 GSKWYKQHLSYRLVNWPQHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATVPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + F E +FD + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALGHAFLPRRGEAHFDGDERWSLSRRRGRNLFVGLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLAHSPAPRALMAPYYKRLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P+G
Sbjct: 274 -DDVLAVQGLYGKPQGGS 290
>gi|325140381|gb|EGC62902.1| iron-regulated protein FrpA [Neisseria meningitidis CU385]
Length = 1271
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 795 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 852
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 853 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LNGGEGNDALYGYNGND 908
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 909 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 968
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 969 IIRFTDGITAD 979
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 995 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1052
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1053 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1090
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1091 TLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1148
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1149 GEGFGQDTVYN 1159
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1055 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1114
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1115 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1174
Query: 390 GLS 392
+
Sbjct: 1175 KAA 1177
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 702 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 761
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 762 YATGRKDIIRFTDGITAD 779
>gi|325134366|gb|EGC57011.1| Iron-regulated protein frpA [Neisseria meningitidis M13399]
Length = 793
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 517 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 574
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 575 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 612
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 613 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 670
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 671 GKGFGQDTVYN 681
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y
Sbjct: 577 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGY---------- 626
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFY 387
+ D L+ E L + LI G D E Y
Sbjct: 627 ---NGNDVLNGGE---------------GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTY 668
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
FG G+D ++ ++ D + G AA H+I G
Sbjct: 669 VFGKGFGQDTVYN--YHVDKNSDTMHFKGF--KAADVHFIRSG 707
>gi|148234994|ref|NP_001084478.1| matrix metallopeptidase 14 (membrane-inserted) [Xenopus laevis]
gi|53830063|gb|AAU94940.1| membrane type-1 matrix metalloproteinase 14 [Xenopus laevis]
gi|124481693|gb|AAI33190.1| Mmp14 protein [Xenopus laevis]
Length = 575
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 60/202 (29%), Gaps = 56/202 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W + I + T + E R A W V L F E
Sbjct: 110 WQHKDITFCIQNYTPKIGEYSTYE-------AIRRAFKVWESVTPLRFREVRYVDIKDGY 162
Query: 74 SIHSDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
+ H+DI G++ + + +FD A+ W R +G
Sbjct: 163 TKHADIMLFFAEGFHGDSTPFDGEGGFLAHAYFPGSGIGGDTHFDSAEPWTARNDDLEGN 222
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HE+GHALGL H + +M+ F +
Sbjct: 223 DLFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQWMDTTNFQ-- 261
Query: 179 YCATPMVSDIVAVQKIYGAPKG 200
D +Q++YG G
Sbjct: 262 ----LPDDDRRGIQQLYGPDHG 279
>gi|229523713|ref|ZP_04413118.1| hypothetical protein VCA_001283 [Vibrio cholerae bv. albensis
VL426]
gi|229337294|gb|EEO02311.1| hypothetical protein VCA_001283 [Vibrio cholerae bv. albensis
VL426]
Length = 886
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 14/132 (10%)
Query: 246 NTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
NT ++S+ G + I ++ + G SGND + G N+ +GND DG
Sbjct: 711 NTAAFSTAHIDIAHGGGGDDRIYGQGGVDLMFGGSGNDQLYGGEGNDGLRGGTGNDTLDG 770
Query: 301 SSGLDTFFYYAPSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVERL----RFADQCI 351
+G D + + E+ + ++ + DF +++ F+D+
Sbjct: 771 GAGNDILIGGLGNDILTGGSGEDLFKWVDGDLDNSKDRITDFTIGQDKIDLSDLFSDETR 830
Query: 352 DSVNVKQRSILE 363
+ ++E
Sbjct: 831 TLDQLLNSHVIE 842
>gi|254425464|ref|ZP_05039181.1| Cna protein B-type domain [Synechococcus sp. PCC 7335]
gi|196187887|gb|EDX82852.1| Cna protein B-type domain [Synechococcus sp. PCC 7335]
Length = 1041
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 65/198 (32%), Gaps = 14/198 (7%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLD-----LTLIGGVKNYIDLNTESW 250
S + ++ + + GG+ D LD TL GG N I +
Sbjct: 724 NGTSGDDTLFGGKRDDILFGLAGNDFLDGGNGDDTLDGGRGNDTLFGGNGNDILIGGADN 783
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + N T+ + + G G+D ++G+ N+ F ND DG G DT
Sbjct: 784 DTLDGGKGNDTLDGGRGNDLLTGGRGSDSLLGSDGNDTLFGGGDNDTLDGGKGNDTLNGD 843
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTAS 367
+ R +A+ D LS D + L + +L
Sbjct: 844 KGNDTLDGGRGSDAL----FGNDGNDILSGGADNDTLDGGKGNDTLDGGRGNDLLNGGRG 899
Query: 368 YEDLIQVIGQDVFESMKH 385
+ L G D+
Sbjct: 900 LDVLFGNDGNDILSGGAD 917
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 15/155 (9%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWS 251
GS GN+ T+ G+D LD L G N I L+ + +
Sbjct: 815 GSDGNDTLFGGGDNDTLDGGKGNDTLNGDKGNDTLDGGRGSDALFGNDGNDI-LSGGADN 873
Query: 252 S-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + N T+ + + G G DV+ GN N++ + ND +G +G DT
Sbjct: 874 DTLDGGKGNDTLDGGRGNDLLNGGRGLDVLFGNDGNDILSGGADNDTLNGGNGNDTLNGG 933
Query: 311 APSYLYKIYRFENAIIVYDANE-----HKQDFLSD 340
+ + + ++ D N+ D L+
Sbjct: 934 KGNDTLDGGKGRDLLLGNDGNDTLIGGGNNDTLTG 968
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 10/151 (6%)
Query: 200 GSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWS 251
G+ GN+I T+ G+DLL+ L G N I L+ + +
Sbjct: 860 GNDGNDILSGGADNDTLDGGKGNDTLDGGRGNDLLNGGRGLDVLFGNDGNDI-LSGGADN 918
Query: 252 S-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T+ +++ G G D+++GN N+ ND G +G DTF
Sbjct: 919 DTLNGGNGNDTLNGGKGNDTLDGGKGRDLLLGNDGNDTLIGGGNNDTLTGGNGRDTFVLS 978
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
I F+ ++ A LS V
Sbjct: 979 LGDGFDTITDFDTKDLIGLAGGLSLGALSFV 1009
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 11/170 (6%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
P+ ++ LD N I+ G + T+ + +
Sbjct: 693 NSPQPYTVSVVSGETITDLDFGNQQRALNIIN----------GTSGDDTLFGGKRDDILF 742
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G + ++ GND G +G D A + + + + N+
Sbjct: 743 GLAGNDFLDGGNGDDTLDGGRGNDTLFGGNGNDILIGGADNDTLDGGKGNDTLDGGRGND 802
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L +D L+ + L G D +
Sbjct: 803 LLTGG-RGSDSLLGSDGNDTLFGGGDNDTLDGGKGNDTLNGDKGNDTLDG 851
>gi|254804468|ref|YP_003082689.1| putative RTX-family exoprotein [Neisseria meningitidis alpha14]
gi|254668010|emb|CBA04368.1| putative RTX-family exoprotein [Neisseria meningitidis alpha14]
Length = 1902
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 77/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1226 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1283
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1284 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1321
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1322 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1379
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1380 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1427
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 77/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1026 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1083
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1084 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1121
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1122 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1179
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1180 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1227
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1426 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1483
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1484 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1521
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1522 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1579
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1580 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1627
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 826 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 883
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 884 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 921
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 922 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 979
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 980 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1027
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1626 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1683
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 1684 GNTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 1721
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1722 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1779
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1780 GKGFGQDTVYN 1790
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y +A+ +
Sbjct: 1686 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 1745
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1746 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1805
Query: 390 GLS 392
+
Sbjct: 1806 KAA 1808
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 733 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 792
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 793 YATGRKDIIRFTDGITAD 810
>gi|119482191|ref|XP_001261124.1| matrix metalloproteinase [Neosartorya fischeri NRRL 181]
gi|119409278|gb|EAW19227.1| matrix metalloproteinase [Neosartorya fischeri NRRL 181]
Length = 616
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 86/229 (37%), Gaps = 76/229 (33%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--TSIHS 77
+ W + + + D T DI+E A+ AL +WS V LTF E ++ +
Sbjct: 96 ESRWQHTNLTFAFDNFTA-----DISE--QQARREILDALADWSNVTPLTFAELPSTQPA 148
Query: 78 DIKFISSNNGYVC-------------------TPRYDSRYFMEINFDKADVWRYGIGKGT 118
D++F+ ++ + P +I+FD+ ++W T
Sbjct: 149 DLRFMWASGNHANEPVEKDFDGLGGVLAHAFFPPPSGGTLAGQIHFDEDELWT-----AT 203
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L + ALHEIGHALGL H SVMS F+ ++ +
Sbjct: 204 GLRNAALHEIGHALGLNHSPD-------------------NLSVMSAFVNTLAIKPLT-- 242
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ DIV VQ +YG Q+ +++DSGG
Sbjct: 243 ------MDDIVGVQSLYG----------------QRPVGPFTSVFDSGG 269
>gi|292621203|ref|XP_001337581.3| PREDICTED: matrix metalloproteinase-28-like [Danio rerio]
Length = 501
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 46/206 (22%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR-WALGEWSKVVDLTFEET- 73
LR + ++ +++ L+ L++ + L+ + +A A WS L F E
Sbjct: 100 QHLRKKRYTQLGEKWQKKQLSYRILNWPRS-LSTSQVHLAVSAAFQLWSNASGLQFLELH 158
Query: 74 SIHSDIKFISSN--------NGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILS 121
+DI+ + N + + F E +FD ++ W KG L
Sbjct: 159 QGPADIRLAFYDGEHNDGAGNAFDGPGGALAHAFFPFRGEAHFDMSERWTLSGYKGHNLF 218
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYC 180
HEIGH LGL+H + +MS Y+ S S+
Sbjct: 219 LVTAHEIGHTLGLVHSPVRHA-------------------LMSPYYKKISSNAVLSW--- 256
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI 206
DI AVQ++YG P G+ +
Sbjct: 257 -----DDITAVQQLYGKP---PGDTV 274
>gi|149204648|ref|ZP_01881613.1| calcium binding hemolysin protein, putative [Roseovarius sp. TM1035]
gi|149141907|gb|EDM29957.1| calcium binding hemolysin protein, putative [Roseovarius sp. TM1035]
Length = 1736
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 8/149 (5%)
Query: 203 GNNIYK--IEVQQKDSPFIQTIYDSG-GDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
G++I + G G+D L + ++ G N + IG
Sbjct: 1519 GDDIIGAGFGDDSVSGGTGNDVVAGGAGNDTLSGGDGNDSMSGSFGNDLIEAGNGADDIG 1578
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI + V G G+D ++G N+ ND DG +G DT A +
Sbjct: 1579 GGTGRDTIDAGAGDDRVGGGEGDDSILGGDGNDFLAGGGRNDTVDGGAGNDTINAGAGND 1638
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + + + D ++D E
Sbjct: 1639 VITGGTGADQFVFSSFFDGEADVITDFED 1667
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 22/205 (10%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDL----------LDLTLIGGV 239
K+YG GN+ + + P + G+D LD +I
Sbjct: 1039 KLYG----GAGNDTLEGGADEDLLHGGPGNDRLDGGAGNDTASYTWARPGGLDGAIIADS 1094
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ +N E+ S+ G + ++ I+ IE+V+G+ +D +IGN+ NN+ +G+D F+
Sbjct: 1095 FGAVTVNLETGSATGAFGTDVLIS----IENVIGTGADDRLIGNALNNMLSGGAGHDSFE 1150
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G G D A + + +V D S + L F
Sbjct: 1151 GGGGDDILITGAG-DDTVVAGAGDDTVVVGLGSKTLDGGSGFDTLDFGTSSGAINLNLAT 1209
Query: 360 SILEYTASYEDLIQVIGQDVFESMK 384
I T + +
Sbjct: 1210 GIYSGTLIDRAPRWADLDPNGDGIA 1234
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 7/117 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + I +S+ G +GNDV+ G ++ G+D +G G D A
Sbjct: 1312 TVSGTSEGDQILGGAGRDSLSGLAGNDVLSGGEGDDTLSAGEGDDTLEGGLGNDRLIGGA 1371
Query: 312 PSYLYKIYRFEN-------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
L + + +D + +E+ RF+D + V
Sbjct: 1372 GFDLAVFTIASTEVRIAQEGTSLSLVSSEGRDTVDGIEQFRFSDGTLTLAQVLTLPP 1428
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 64/202 (31%), Gaps = 16/202 (7%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G++G++ + +I GG+D + + TL GG N +
Sbjct: 1434 TGTVGDDTIIGSSGDDTLSAQGGNDSINGLGGNDGVFGEDGNDTLSGGEGNDTLAGADGD 1493
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + ++ +++ G G+D++ ++ +GNDV G +G DT
Sbjct: 1494 DDVSGGPGDDSMGGGLGNDTLRGGEGDDIIGAGFGDDSVSGGTGNDVVAGGAGNDTLSGG 1553
Query: 311 APSYLYK-------IYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ I A + D + +R+ + + L
Sbjct: 1554 DGNDSMSGSFGNDLIEAGNGADDIGGGTGRDTIDAGAGDDRVGGGEGDDSILGGDGNDFL 1613
Query: 363 EYTASYEDLIQVIGQDVFESMK 384
+ + G D +
Sbjct: 1614 AGGGRNDTVDGGAGNDTINAGA 1635
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 22/199 (11%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD- 329
G GND + G++ N+ SG+DV G D + +++ R N+ + D
Sbjct: 502 ANGLGGNDRIFGSTLNDQLNGGSGDDVLVPGRGDDQANGGTGTDTFQVLRGANSRLTVDL 561
Query: 330 ----ANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ +D LS VE + + DQ +++ + + + G D ++
Sbjct: 562 IAGTSFGQGRDTLSSVENVIASPDQDHKIRGTDGANVIYTGDGIDVITGLDGNDTIDAGG 621
Query: 385 --HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G G D+ D+ + + + HYI D F
Sbjct: 622 EDDYIIGGR--GADVINAG----AGNTDVMISGSAAQAGISDHYI--------GGDGFDV 667
Query: 443 LEYIASHEDLINAFADAPD 461
+ Y +S + D D
Sbjct: 668 VSYTSSSNTIRFDINDQTD 686
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 18/158 (11%)
Query: 218 FIQTIYDSGGD----DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ I D G D ++ GGV D W G + +A + + + G
Sbjct: 316 LLEYIVDGLGTIPLLDTVEDAFFGGVVGNADQGPTGW----GNDVANLLAGDSGDDILDG 371
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------ 327
G+D ++G N+V +G D+ +G +G D F++ A Y++ R + +
Sbjct: 372 LDGSDTILGGGGNDVLIAGAGYDLLEGGAGNDLFYFGASFTEYELARDPDTGDIIVSHLA 431
Query: 328 -YDANEHKQDF---LSDVERLRFADQCIDSVNVKQRSI 361
A D L D + + F D ++ I
Sbjct: 432 PQTAVNTGIDVLVALQDGDHVVFTDISFSGADLNNALI 469
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 30/222 (13%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+D+V +++ G G G + +V +G + ++ + +D+
Sbjct: 940 NDVVRIERFRGTADGGTGYDTIAFDVNFNSRIVANL--AAGTVVSFNGLVVNNSEQ-VDM 996
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS--- 302
E++ + E N I + E ++G GND + G + + +GND +G +
Sbjct: 997 TLENFEVVIATEFNDLIDGSSRSEQILGRGGNDTLRGAEGRDKLYGGAGNDTLEGGADED 1056
Query: 303 ------GLDTFFYYAPSYLYK-------------IYRFENAIIV-----YDANEHKQDFL 338
G D A + I A+ V D L
Sbjct: 1057 LLHGGPGNDRLDGGAGNDTASYTWARPGGLDGAIIADSFGAVTVNLETGSATGAFGTDVL 1116
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+E + + ++L A ++ G D+
Sbjct: 1117 ISIENVIGTGADDRLIGNALNNMLSGGAGHDSFEGGGGDDIL 1158
>gi|115923415|ref|XP_786263.2| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
gi|115934683|ref|XP_001180589.1| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
Length = 571
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 70/204 (34%), Gaps = 50/204 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---SIH 76
+ W+ + Y+ T R + ++E+ + R A WS V L F E ++
Sbjct: 112 NYRWNKETLTYRIVNFPTMRKASSVSEV--QVRHDVRMAFKLWSDVTPLVFIEVHDDTVE 169
Query: 77 SDIKFISSN---NGYVCTPRYDSRYF----------------MEINFDKADVWRYGIGKG 117
DI+ + P +D +++FD + + + I G
Sbjct: 170 VDIELKFGSRVHTSVYGDPAFDGEGGTLAHAFTPNSGWGKTNGDVHFDDDEHFTHKIYSG 229
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L + HEIGHALGL H N S+M P D +F
Sbjct: 230 VNLFYTTAHEIGHALGLDHSDQRN-------------------SLM---WPWDKGYIPNF 267
Query: 178 GYCATPMVSDIVAVQKIYGAPKGS 201
+ D + +Q +YG +
Sbjct: 268 RLP----LDDKLGIQVVYGGNTKN 287
>gi|1514963|dbj|BAA11524.1| stromelysin-1/2-a [Cynops pyrrhogaster]
Length = 483
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 60/190 (31%), Gaps = 47/190 (24%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---ETSIHSD 78
W + Y+ T D+ R A WS V LTF E +
Sbjct: 106 TWRTTSLTYRILGYTPDMAEADV-------DTAIRRAFKVWSDVTPLTFSRIYEGTADIQ 158
Query: 79 IKFISSNNG----YVCTPRYDSRYFMEIN-------FDKADVWRYGIGKGTILSHNALHE 127
I F + +G + + F N FD+ + W G G L A HE
Sbjct: 159 ISFGAGVHGDFYPFDGPHGTLAHAFAPGNSIGGDAHFDEDETWTAGSA-GYNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H G + + SY P A F D
Sbjct: 218 FGHSLGLSHSGDRSA---------------LMYPTYSYIDP------ARFRLPQ----DD 252
Query: 188 IVAVQKIYGA 197
+ +Q +YGA
Sbjct: 253 VDGIQALYGA 262
>gi|325204399|gb|ADY99852.1| Iron-regulated protein frpC [Neisseria meningitidis M01-240355]
Length = 1010
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 534 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 591
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ + N + G E N + + +
Sbjct: 592 GSTLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 647
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 648 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 707
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 708 IIRFTDGITAD 718
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 734 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 791
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 792 GSTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 829
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 830 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 887
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 888 GKGFGQDTVYN 898
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 441 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 500
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 501 YATGRKDIIRFTDGITAD 518
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y + + +
Sbjct: 794 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 853
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 854 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 913
Query: 390 GLS 392
+
Sbjct: 914 KAA 916
>gi|189347634|ref|YP_001944163.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
gi|189341781|gb|ACD91184.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
Length = 3954
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 72/194 (37%), Gaps = 18/194 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-GGVKNYIDLNTESWSSIGGYE 257
+G GN+ Y ++ + + G D ++ + +N +L S I G+
Sbjct: 926 EGGSGNDTYVVDSSGDVVVEQR----NSGTDTVESSSDHALSENVENLILTGTSDINGFG 981
Query: 258 K--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N IA + + G SGND+V G + +GND G +G DT Y
Sbjct: 982 NSLNNVIAGNDGNNLIEGGSGNDLVDGGIGADTLTGGAGNDSITGGAGDDTAIYSGNFGD 1041
Query: 316 YKIY--RFENAIIVYDA--NEHKQDFLSDVERLRFADQC-------IDSVNVKQRSILEY 364
Y I +A + D D +S E FAD +++N +
Sbjct: 1042 YLITYDAGTSAYTIEDTIDGRDGTDVISHAEYFVFADGLKTKDELIGNNLNGTENDDTLT 1101
Query: 365 TASYEDLIQVIGQD 378
++D++ G +
Sbjct: 1102 GTEHDDMMDGFGGN 1115
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 63/200 (31%), Gaps = 39/200 (19%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+Y G+D +D + L GG N + + + ++ G E N T+
Sbjct: 3400 DDDLSGDSGNDTMYGGAGNDTIDGSDGNNYLDGGEDNDVLVGDDDRDTLIGGEGNDTLLS 3459
Query: 265 HTVIESVVGSSGND------------------------------VVIGNSANNVFFESSG 294
+S+ G G+D + G + N+ +G
Sbjct: 3460 DKGDDSLSGGDGDDYLHGEWGSSELDYVGTGEMIVPGGPEDGSDTLDGGAGNDTLIGGAG 3519
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIY----RFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+D G G DT + Y I F ++ A+ D + VE FAD
Sbjct: 3520 DDTLIGGDGNDTAVFSGNYEDYTITYDVATFAYTVVDSIADRDGTDVVGSVETFLFADGT 3579
Query: 351 IDSVNVKQRSILEYTASYED 370
S + + D
Sbjct: 3580 RSSNAAPALTAFSGAIATTD 3599
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 12/165 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G +D T + +++ G N TI +++ G +GND++ GN+ N
Sbjct: 766 GSGSIDGTGNSSDNDITGNRAG--NALYGAAGNDTIDGGAGDDTIDGGAGNDLLEGNTGN 823
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------- 339
+ G+D G SG + +Y I + I+ DA +
Sbjct: 824 DTLEGGEGSDTLTGGSGSNMLSGGDGDDMY-ILESGDDTIIEDAEGGNDTVRTASSHILE 882
Query: 340 -DVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
VE L +++ Y L G D E
Sbjct: 883 DGVENLVLVGTGAIDGTGNALNNVITGGRGYNRLDGSAGTDTLEG 927
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 8/186 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVKNYIDLNTESWSSIGGY 256
G GN+ Y ++ + G D + + ++ G + L G
Sbjct: 396 GGRGNDTYSVDSENDIIVEN----AGEGTDSVQASINYVLSGNLEKLTLTGTDAIDGTGN 451
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N TI ++ + G +GND + G + +++ GN++ DG G DT + Y
Sbjct: 452 ELNNTITGNSGANILDGGAGNDTLDGGAGDDMLLGGIGNELLDGGIGNDTMQGGIGNDTY 511
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ EN +IV +A E + + + + + L G
Sbjct: 512 SV-DSENDVIVENAGEGTDSVQASINYVLSGNIEKLILTGSDDIHGTGNELNNALTGNSG 570
Query: 377 QDVFES 382
++ +
Sbjct: 571 ANMLDG 576
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 78/209 (37%), Gaps = 6/209 (2%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ + +Y E + +GG D +L GG N + ++ + G E +
Sbjct: 3342 GTGNDTLYGGEGNDTLYGGEEADDSTGGGYRTD-SLYGGAGNDVLEVSDVDGYLDGGEGD 3400
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + +++ G +GND + G+ NN NDV G DT +
Sbjct: 3401 DDLSGDSGNDTMYGGAGNDTIDGSDGNNYLDGGEDNDVLVGDDDRDTLIGGEGNDTLLSD 3460
Query: 320 RFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++++ D ++ H + S+++ + + + L+ A + LI G
Sbjct: 3461 KGDDSLSGGDGDDYLHGEWGSSELDYVGTGEMIVPGGPEDGSDTLDGGAGNDTLIGGAGD 3520
Query: 378 D---VFESMKHFYEFGLSEGRDITFDSYL 403
D + G E IT+D
Sbjct: 3521 DTLIGGDGNDTAVFSGNYEDYTITYDVAT 3549
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 52/171 (30%), Gaps = 6/171 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++Y GDD L+ G +Y ++ G N TI+ +
Sbjct: 1864 NDSLYAGNGNDSLYGGDGDDYLE-AGYGYYDSYSGTWITGNVTLDGGYGNDTISGRDGND 1922
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+VG +G+D + + N GND G G D + + + D
Sbjct: 1923 LLVGGAGDDDLSDWAGANTLEGGDGNDTLTGGYGNDLIDGGTGNDS---ISGGDGFDMLD 1979
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ + + + S L+ A + + G D
Sbjct: 1980 GGTGDDTMIAGYDY--GSGAASARMATSGGSTLDGGAGNDSIFGGAGDDSL 2028
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 66/193 (34%), Gaps = 15/193 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN---YIDLNTESWSSIGGYEKN 259
GN+ Y ++ + + G D + ++ + + + L + G + +
Sbjct: 615 GNDTYVVDNEGDEITEN----AGEGTDSVQSSVSYALSSSLERLTLTGSGSVNGYGNDLD 670
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-- 317
+ + + GS GND + G + N++ + +GND DG G DT + + Y
Sbjct: 671 NAVTGNAGNNELSGSGGNDTISGGAGNDLIWGGTGNDKLDGGIGADTMTGGSGNDTYVVD 730
Query: 318 -----IYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
I E+ + ++E+L ID + + + L
Sbjct: 731 NESDGITENEDEGVDNVQASVSYALSQNIEQLILTGSGSIDGTGNSSDNDITGNRAGNAL 790
Query: 372 IQVIGQDVFESMK 384
G D +
Sbjct: 791 YGAAGNDTIDGGA 803
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 46/130 (35%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY ++ + +S++G+ GND + G+ N+ G+DV DG +G DT +
Sbjct: 3294 VVGYSNDLVQHGTSSDDSIIGTPGNDALYGHGGNDTLDGQGGDDVLDGGTGNDTLYGGEG 3353
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + + L +D + L + + +
Sbjct: 3354 NDTLYGGEEADDSTGGGYRTDSLYGGAGNDVLEVSDVDGYLDGGEGDDDLSGDSGNDTMY 3413
Query: 373 QVIGQDVFES 382
G D +
Sbjct: 3414 GGAGNDTIDG 3423
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 10/186 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSI 253
G ++ + I + S ++ G D L + G +N L +
Sbjct: 1049 GTSAYTIEDTIDGRDGTDVISHAEYFVFADGLKTKDELIGNNLNGTENDDTLTGTEHDDM 1108
Query: 254 -GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G+ N +I+ +++ G SGND + G+ + + + G+DV DG +G D +
Sbjct: 1109 MDGFGGNDSISGMGGNDTLYGGSGNDTLYGDDGEDALYGAEGDDVMDGGAGNDFLHGDSG 1168
Query: 313 SYL-------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ +++ + A ++ + F + + D+ DS++ + + L
Sbjct: 1169 NDSMFGGSGNDQLHGSDGADALHGNADDDMLFGIAGDDALYGDEGSDSLHGGEGNDLVDG 1228
Query: 366 ASYEDL 371
+ DL
Sbjct: 1229 GTGNDL 1234
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 1/125 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + +I +++ G GND + G ++V +GND G G DT + +
Sbjct: 3305 GTSSDDSIIGTPGNDALYGHGGNDTLDGQGGDDVLDGGTGNDTLYGGEGNDTLYGGEEAD 3364
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + A +SDV+ + D ++ + Y + D I
Sbjct: 3365 DSTGGGYRTDSLYGGAGNDVL-EVSDVDGYLDGGEGDDDLSGDSGNDTMYGGAGNDTIDG 3423
Query: 375 IGQDV 379
+
Sbjct: 3424 SDGNN 3428
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 64/214 (29%), Gaps = 20/214 (9%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSL-----GNNIYKIEVQQ---KDSPFIQTIY 223
DA G M+ I +YG GN++ + T+Y
Sbjct: 1186 GADALHGNADDDMLFGIAGDDALYGDEGSDSLHGGEGNDLVDGGTGNDLLHGNQGADTMY 1245
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D ++ GG + + + G + TI + V G GND + GN
Sbjct: 1246 GGEGND----SVEGGDDSDLQYGDGGDDYMEGDGGDDTIHAGEGADIVYGGDGNDSIHGN 1301
Query: 284 SANNVFFESSGNDVFDG--------SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ G+D +G G D + N I+ +
Sbjct: 1302 QGADTLHGGEGSDSVEGGDDSDLQYGDGGDDYMEGDGGDDALFGGDGNDGIIGGDDNDSV 1361
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
D + + + +D V ++ ++
Sbjct: 1362 DGGAGDDMIEGSDGNDTVVGGDGDDVIYGDELHD 1395
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID---LNTESWSSIGGY 256
G +GN+ Y V ++ ++ G D + ++ + I+ L G
Sbjct: 504 GGIGNDTY--SVDSENDVIVEN--AGEGTDSVQASINYVLSGNIEKLILTGSDDIHGTGN 559
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N + ++ + G SGND + G + +V GND+ DG G DT + Y
Sbjct: 560 ELNNALTGNSGANMLDGGSGNDTLEGGAGADVLLGGIGNDLLDGGIGNDTMQGGEGNDTY 619
Query: 317 KIYRFENAII 326
+ + I
Sbjct: 620 VVDNEGDEIT 629
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 58/185 (31%), Gaps = 12/185 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G + LD + G I SI G N I+ T + + G +GND + G
Sbjct: 258 NGIGNALDNLITGNTGINILDGGAGNDSIDGGSGNDIISGETGDDQLAGGTGNDRIYGGE 317
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ +G D +G SG D F +A+ N+
Sbjct: 318 GDDRLDGGAGKDNLEGGSGSDQLFGNDSDDQLSGSEGNDALDGGTGNDSLDG-------- 369
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSY 402
D + +L+ + + G D +S EG D S
Sbjct: 370 --GDGDDMLLGGIGNDLLDGGIGNDMMQGGRGNDTYSVDSENDIIVENAGEGTDSVQASI 427
Query: 403 LYLGS 407
Y+ S
Sbjct: 428 NYVLS 432
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 6/149 (4%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI- 243
+SD + G Y +I G D+LD G I
Sbjct: 1933 LSDWAGANTLEGGDGNDTLTGGYG-NDLIDGGTGNDSISGGDGFDMLD--GGTGDDTMIA 1989
Query: 244 --DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
D + + S+ T+ +S+ G +G+D ++G + N+ ++ +G + DG
Sbjct: 1990 GYDYGSGAASARMATSGGSTLDGGAGNDSIFGGAGDDSLVGGTGNDYLYDWNGANTIDGG 2049
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G DT Y + + +++ +
Sbjct: 2050 EGDDTISYSSGDAFIDGGDGVDTLVLDSS 2078
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D D L + + G +++ S S + + +++G+ GND++ G
Sbjct: 124 DMAASDDLTGSRLKGGDWTLEVTAGSVESAMKTPS--SDVYGHTLATIIGTVGNDLLNGT 181
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
SA+++ GND DG +G D+ A Y + ++I+ +
Sbjct: 182 SASDLLLGLEGNDTLDGKAGADSMEGGAGDDTYVVDHAGDSIVEHAG 228
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 65/198 (32%), Gaps = 13/198 (6%)
Query: 194 IYGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+YG+ G+ S ++ GDD L V Y D T+ W
Sbjct: 1708 LYGSDGNDVLAGD---ADADTLDGSTGSDSMLGGEGDDYLYGGGTTYVSTY-DSATDIWD 1763
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ Y+ N T+ T + + GND++ G ++ + G+++ DG G D
Sbjct: 1764 TMIIYDGNDTLDGGTGNDYLSAGDGNDLLQGGEGDDQLYGGQGSNMLDGGDGADYLRGEG 1823
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S ++ + A D +S D L + L
Sbjct: 1824 ISDTLLGGDGDDDLSGSYAY---YDSVSGFHY----DGGSSLDGGIGNDSLYAGNGNDSL 1876
Query: 372 IQVIGQDVFESMKHFYEF 389
G D E+ +Y+
Sbjct: 1877 YGGDGDDYLEAGYGYYDS 1894
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 14/119 (11%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+P +Y GG+D LD G + +D T + ++ G E N T+ + G
Sbjct: 3314 GTPGNDALYGHGGNDTLDG---QGGDDVLDGGTGND-TLYGGEGNDTLYGGEEADDSTGG 3369
Query: 275 SGN-DVVIGNSANNV---------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D + G + N+V G+D G SG DT + A + N
Sbjct: 3370 GYRTDSLYGGAGNDVLEVSDVDGYLDGGEGDDDLSGDSGNDTMYGGAGNDTIDGSDGNN 3428
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 20/110 (18%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ ++VV GN +NV SGND +G SG D+ + + S
Sbjct: 1501 GNALDNVVTGNGRDNVLDGQSGNDTIEGGSGNDSVWGGSGSDSID-------------GG 1547
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D+LS + +AD ++ A +D+ G DV
Sbjct: 1548 AGNDYLSGTDYYGYADGG-------DADMITGGAGDDDIRGGAGNDVLSG 1590
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 38/134 (28%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G N + H +++ G G+DV+ G + N+ + GND G D
Sbjct: 3311 SIIGTPGNDALYGHGGNDTLDGQGGDDVLDGGTGNDTLYGGEGNDTLYGGEEADDSTGGG 3370
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N ++ + D + L ++ + L
Sbjct: 3371 YRTDSLYGGAGNDVLEVSDVDGYLDGGEGDDDLSGDSGNDTMYGGAGNDTIDGSDGNNYL 3430
Query: 372 IQVIGQDVFESMKH 385
DV
Sbjct: 3431 DGGEDNDVLVGDDD 3444
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 20/172 (11%)
Query: 223 YDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
Y GGDD + D L GG N + + S+ G + I ++VVG G+
Sbjct: 1326 YGDGGDDYMEGDGGDDALFGGDGNDGIIGGDDNDSVDGGAGDDMIEGSDGNDTVVGGDGD 1385
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV+ G+ ++ G+D+ G G D + ++
Sbjct: 1386 DVIYGDELHDS---PGGDDLLYGGDGNDILVGGFGNDSLNGGVGNDS------------L 1430
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
E AD ID++ + + S +D+++ + +++ F ++
Sbjct: 1431 FGGNEYNLGADDGIDTLAGGVGDDIYFVDSLQDIVKENSGEGQDTVLSFIDY 1482
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 2/124 (1%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ T+ + +++ GS GNDV+ G++ + S+G+D G G D + +Y+
Sbjct: 1694 DGQNTLYGGSGSDTLYGSDGNDVLAGDADADTLDGSTGSDSMLGGEGDDYLYGGGTTYVS 1753
Query: 317 KIYRFEN--AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ D + + L D + L L
Sbjct: 1754 TYDSATDIWDTMIIYDGNDTLDGGTGNDYLSAGDGNDLLQGGEGDDQLYGGQGSNMLDGG 1813
Query: 375 IGQD 378
G D
Sbjct: 1814 DGAD 1817
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 263 AQHTVIESVVGSSGND-VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+++VV +G D V+ G S N+ SGND G SG D+ A + +
Sbjct: 1499 GTGNALDNVVTGNGRDNVLDGQSGNDTIEGGSGNDSVWGGSGSDSIDGGAGNDYLSGTDY 1558
Query: 322 ENAIIVYDAN 331
DA+
Sbjct: 1559 YGYADGGDAD 1568
Score = 44.3 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 7/157 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD + GG + T S + +N+ + I+ G++ N+V+ G
Sbjct: 858 GDDTIIEDAEGGNDT---VRTASSHILEDGVENLVLVGTGAID-GTGNALNNVITGGRGY 913
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N S+G D +G SG DT+ + + R V +++H +VE L
Sbjct: 914 NRLDGSAGTDTLEGGSGNDTYVVDSSGDVVVEQRNSGTDTVESSSDHA--LSENVENLIL 971
Query: 347 ADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ +++ + G D+ +
Sbjct: 972 TGTSDINGFGNSLNNVIAGNDGNNLIEGGSGNDLVDG 1008
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 38/133 (28%), Gaps = 20/133 (15%)
Query: 267 VIESVVGS-------------------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+I + + GND + G N+ + SGND G G D
Sbjct: 1086 LIGNNLNGTENDDTLTGTEHDDMMDGFGGNDSISGMGGNDTLYGGSGNDTLYGDDGEDAL 1145
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + N + D+ S ++L +D +L A
Sbjct: 1146 YGAEGDDVMD-GGAGNDFLHGDSGNDSMFGGSGNDQLHGSDGADALHGNADDDMLFGIAG 1204
Query: 368 YEDLIQVIGQDVF 380
+ L G D
Sbjct: 1205 DDALYGDEGSDSL 1217
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 5/88 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G ++ + + +++ G SGND V G S ++ +GND G+ +Y
Sbjct: 1508 VTGNGRDNVLDGQSGNDTIEGGSGNDSVWGGSGSDSIDGGAGNDYLSGTD-----YYGYA 1562
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
A D LS
Sbjct: 1563 DGGDADMITGGAGDDDIRGGAGNDVLSG 1590
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 23/125 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +++ G D +D G N ++
Sbjct: 1523 NDTIEGGSGNDSVWGGSGSDSID----------------------GGAGNDYLSGTDYYG 1560
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G D++ G + ++ +GNDV G G D+ + + ++++ D
Sbjct: 1561 YADGGDA-DMITGGAGDDDIRGGAGNDVLSGDDGRDSLYGENGADDIDGGDGDDSLYGGD 1619
Query: 330 ANEHK 334
N+
Sbjct: 1620 GNDAM 1624
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 57/194 (29%), Gaps = 31/194 (15%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + S T+ GDD++ + DL + G + N + +
Sbjct: 1367 DDMIEGSDGNDTVVGGDGDDVIYGDELHDSPGGDDL-------LYGGDGNDILVGGFGND 1419
Query: 270 SVVGSSGNDVVIGNSANN--------VFFESSGNDVF-----------DGSSGLDTFFYY 310
S+ G GND + G + N G+D++ + G DT
Sbjct: 1420 SLNGGVGNDSLFGGNEYNLGADDGIDTLAGGVGDDIYFVDSLQDIVKENSGEGQDTVL-- 1477
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y + + + D + L +V + + +E + +
Sbjct: 1478 -SFIDYTLLDEVENLELLDGIRGTGNALDNV--VTGNGRDNVLDGQSGNDTIEGGSGNDS 1534
Query: 371 LIQVIGQDVFESMK 384
+ G D +
Sbjct: 1535 VWGGSGSDSIDGGA 1548
>gi|56696501|ref|YP_166858.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56678238|gb|AAV94904.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 1003
Score = 74.0 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 16/171 (9%)
Query: 215 DSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G D LD +++GG+ N I ++ G + N +I +
Sbjct: 563 GGRGNDTLDGGSGADTLDGGVDNDSVLGGIGNDILFGQAGDDTLIGGDGNDSILGGIGND 622
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA-------PSYLYKIYRFE 322
S+ G +G+D + G+ N+ SG D G +G D+ A + +
Sbjct: 623 SLRGGNGDDTLSGSDGNDTLIGDSGRDSLVGGAGDDSLQGGADADTLVGGTGNDSFFDGG 682
Query: 323 NAIIVYDANEHKQDFLSD----VERLRFADQCIDSVNVKQRSILEYTASYE 369
+V + FL + F + N + +Y
Sbjct: 683 GDDLVLGSEGDDLFFLGGGHNTIGDFGFDSGLKNDGNQSNNDFVNLAINYN 733
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 75/207 (36%), Gaps = 16/207 (7%)
Query: 204 NNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ ++ + + ++ + GDD L + GG + +D + + ++ G + N +
Sbjct: 496 DTLFGDNEGITSARADGNDLLFGNDGDDSL---IGGGGSDTLDGGSGAD-TLDGGDGNDS 551
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + V+G GND + G S + ND G G D F A
Sbjct: 552 VLGQADDDLVIGGRGNDTLDGGSGADTLDGGVDNDSVLGGIGNDILFGQAGDDTLIGGDG 611
Query: 322 ENAIIVYDANE-----HKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++I+ N+ + D LS + L V L+ A + L+
Sbjct: 612 NDSILGGIGNDSLRGGNGDDTLSGSDGNDTLIGDSGRDSLVGGAGDDSLQGGADADTLVG 671
Query: 374 VIGQDV-FESMKHFYEFGLSEGRDITF 399
G D F+ G SEG D+ F
Sbjct: 672 GTGNDSFFDGGGDDLVLG-SEGDDLFF 697
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 8/125 (6%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-----APSYLYKIYR 320
T +++ G GND++IGN ++ +D DG SG DT F +
Sbjct: 457 TANDTLFGGVGNDLLIGNDGDDSLIGGDESDTLDGGSGADTLFGDNEGITSARADGNDLL 516
Query: 321 FENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
F N D L S + L D + ++ + L G
Sbjct: 517 FGNDGDDSLIGGGGSDTLDGGSGADTLDGGDGNDSVLGQADDDLVIGGRGNDTLDGGSGA 576
Query: 378 DVFES 382
D +
Sbjct: 577 DTLDG 581
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 19/142 (13%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG------------------NDVF 298
N T+ + ++G+ G+D +IG ++ SG ND+
Sbjct: 457 TANDTLFGGVGNDLLIGNDGDDSLIGGDESDTLDGGSGADTLFGDNEGITSARADGNDLL 516
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G+ G D+ S + + D N+ D + +
Sbjct: 517 FGNDGDDSLIGGGGSDTLDGGSGADTLDGGDGNDSVLGQADD-DLVIGGRGNDTLDGGSG 575
Query: 359 RSILEYTASYEDLIQVIGQDVF 380
L+ + ++ IG D+
Sbjct: 576 ADTLDGGVDNDSVLGGIGNDIL 597
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 13/117 (11%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
TI +G D +++ +G + +L+ + + I ++V G+D
Sbjct: 175 TISGTGLADRINIRYLGDRDGDVVDNLDAMGLNGELPESDDDLIDALGGNDTVESGRGHD 234
Query: 279 VVIGNSA---------NNVFFESSGNDVFDGSSGLD--TFFYYAPSYLYKIYRFENA 324
V+G + G D DG G D T Y + + +I N+
Sbjct: 235 TVMGGDGDDSIDGGAGADRLLGGEGADTLDGGIGADPLTPVYQQVTSVNQILDGVNS 291
>gi|11935132|gb|AAG41981.1| matrix metalloproteinase 28 [Homo sapiens]
Length = 520
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 59/198 (29%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPEHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGGS 290
>gi|326931304|ref|XP_003211772.1| PREDICTED: matrix metalloproteinase-28-like [Meleagris gallopavo]
Length = 443
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 67/197 (34%), Gaps = 48/197 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
W + Y+ + ++ + R A WS V L F E +D
Sbjct: 51 GSKWHKRHLTYRVVNWPPYLPQHEV-------RLAVRAAFELWSNVSSLVFWEARDGPAD 103
Query: 79 IKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNALH 126
I+ NN + + F E +FD A+ W GKG L H
Sbjct: 104 IRLTFFHGDHNDGLNNAFDGPGGALAHAFFPRRGEAHFDSAERWSLHSGKGRNLFVVVAH 163
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYCATPMV 185
E+GH LGL H +++MS Y+ + D +
Sbjct: 164 EVGHTLGLEHS-------------------PTKSALMSPYY--KKLGKDFVLNW------ 196
Query: 186 SDIVAVQKIYGAPKGSL 202
DI+A+Q +YG P G L
Sbjct: 197 DDILAIQNLYGKPSGGL 213
>gi|163853112|ref|YP_001641155.1| hypothetical protein Mext_3709 [Methylobacterium extorquens PA1]
gi|163664717|gb|ABY32084.1| hypothetical protein Mext_3709 [Methylobacterium extorquens PA1]
Length = 255
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 12/84 (14%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D YL + D+ HY+ G +EGR P A F + Y+ ++ DL +
Sbjct: 160 DRDYYLAANPDVAAA----DVDPLVHYLEFGGREGRAPSALFDGVRYLDANPDLREVGIN 215
Query: 459 APDLVQVGKDHFSNFGCEEGRFVT 482
HF +G E R
Sbjct: 216 P-------LLHFILYGVVERRPCG 232
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 12/105 (11%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYL 403
+DQ + + + Y A+ D+ + + H+ EFG EGR + FD
Sbjct: 147 LSDQSLVAASGLLDRD-YYLAANPDVAAA----DVDPLVHYLEFGGREGRAPSALFDGVR 201
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIA 447
YL + DLR G + H+I +GV E R L Y +
Sbjct: 202 YLDANPDLRE-VGIN---PLLHFILYGVVERRPCGVPLDLLPYAS 242
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 15/111 (13%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDD 578
Y+A++ D+ A D H+ FG EGR+ + F+ YL + D
Sbjct: 156 SGLLDRDYYLAANPDVAAADVDP-------LVHYLEFGGREGRAPSALFDGVRYLDANPD 208
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALG--ISGMQFKSVMNLSEKSRDKAD 627
L V H+I +G+ E R G + + + S +++ + A
Sbjct: 209 LREV----GINPLLHFILYGVVERRPCGVPLDLLPYASPRGVNKIFVENAY 255
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 13/110 (11%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
Y+A++ D+ A D H+ FG EGR + FD YL + D
Sbjct: 156 SGLLDRDYYLAANPDVAAADVDP-------LVHYLEFGGREGRAPSALFDGVRYLDANPD 208
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
LR V H+I +GV E R L AS + F +
Sbjct: 209 LREVG----INPLLHFILYGVVERRPCGVPLDLLPYASPRGVNKIFVENA 254
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
D YL + D+ HY+ G +EGR P A F + Y+ ++ DL
Sbjct: 159 LDRDYYLAANPDVAAADVD----PLVHYLEFGGREGRAPSALFDGVRYLDANPDLREVGI 214
Query: 542 DAPDLVQAGKDHFSNFGYEEGRS 564
+ HF +G E R
Sbjct: 215 NP-------LLHFILYGVVERRP 230
>gi|10946772|ref|NP_067387.1| matrix metalloproteinase-19 isoform 1 [Mus musculus]
gi|12585271|sp|Q9JHI0|MMP19_MOUSE RecName: Full=Matrix metalloproteinase-19; Short=MMP-19; AltName:
Full=Matrix metalloproteinase RASI; Flags: Precursor
gi|8132443|gb|AAF73292.1|AF155221_1 matrix metalloproteinase 19 [Mus musculus]
gi|11095502|gb|AAG29880.1|AF153199_1 matrix metalloproteinase 19 [Mus musculus]
gi|8886433|gb|AAF80464.1| matrix metalloproteinase-19 [Mus musculus]
gi|86577774|gb|AAI12967.1| Matrix metallopeptidase 19 [Mus musculus]
gi|148692666|gb|EDL24613.1| matrix metallopeptidase 19, isoform CRA_a [Mus musculus]
Length = 527
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 62/189 (32%), Gaps = 47/189 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEETSIH-SD 78
+W + ++ + + L+ P + A WS V LTF E +D
Sbjct: 103 GHWRKKNLTFRIFNVP--------STLSLPRVRAALHQAFKYWSSVAPLTFREVKAGWAD 154
Query: 79 IKFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHE 127
I+ C+ +D I+FDK ++W G +G L A HE
Sbjct: 155 IRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRIIAAHE 214
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GHALGL H Y + + A + D
Sbjct: 215 VGHALGLGHSR--------------------------YTQALMAPVYAGYQPFFKLHPDD 248
Query: 188 IVAVQKIYG 196
+ +Q +YG
Sbjct: 249 VAGIQALYG 257
>gi|254673668|emb|CBA09254.1| putative calcium binding hemolysin protein [Neisseria meningitidis
alpha275]
Length = 1502
Score = 74.0 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1026 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1083
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1084 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LNGGEGNDALYGYNGND 1139
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1140 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1199
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1200 IIRFTDGITAD 1210
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 826 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVAIVKKL--VQQSTDGSDRLYAYQS 883
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 884 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 921
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 922 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 979
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 980 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1027
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1226 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1283
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1284 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1321
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1322 TLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1379
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1380 GEGFGQDTVYN 1390
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1286 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1345
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1346 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1405
Query: 390 GLS 392
+
Sbjct: 1406 KAA 1408
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ GND +G SG DT+ + +Y ++
Sbjct: 733 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGVGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 792
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 793 YATGRKDIIRFTDGITAD 810
>gi|71892410|ref|NP_001025460.1| matrix metalloproteinase-27 [Mus musculus]
gi|147898093|gb|AAI40433.1| Matrix metallopeptidase 27 [synthetic construct]
Length = 551
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 68/217 (31%), Gaps = 73/217 (33%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + AL WSKV LTF S +DI
Sbjct: 120 WRKYSLTYRIMNYTPDMTPADV-------DEAIQKALQVWSKVTPLTFTRISKGVADIMI 172
Query: 82 ISSNNGYVCTPRYDS-------RYFM---------------------------------E 101
G C+ D Y +
Sbjct: 173 AFRTGGKACSEGSDFFEDHRELTYLPINCLSVHGWCPRHFDGPLGVLGHAFPPGLGLGGD 232
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
+FD+ + W G+G L A HE GH+LGL H T+
Sbjct: 233 THFDEDETWIAKDGEGFNLFLVAAHEFGHSLGLSHSND-------------------QTA 273
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+M P +D S Y + DI +Q IYG+P
Sbjct: 274 LM---FPNYISLDPSK-YPLS--QDDIDGIQSIYGSP 304
>gi|260816789|ref|XP_002603270.1| hypothetical protein BRAFLDRAFT_226380 [Branchiostoma floridae]
gi|229288588|gb|EEN59281.1| hypothetical protein BRAFLDRAFT_226380 [Branchiostoma floridae]
Length = 495
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 52/160 (32%), Gaps = 37/160 (23%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+ + +A ++L W + I YK T ++ + + A WS
Sbjct: 79 WLSVD-VAPYVLSGTKWHKFQITYKITEYTPRLSQSEV-------RRIMHDAFQIWSDYT 130
Query: 67 DLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFME------------------------ 101
L F E + +D+ + +D R+ +
Sbjct: 131 PLDFTEVTSGNADMLIAFPRWDHGDGTPFDGRWDPDRGTGLGLAHAFMPPRSERIAKKYG 190
Query: 102 ----INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+FD + W G +G L A HE GHALGL H
Sbjct: 191 IDGDTHFDGDEQWTTGTHRGVDLLQVATHEFGHALGLGHT 230
>gi|325141824|gb|EGC64270.1| Iron-regulated protein frpC [Neisseria meningitidis 961-5945]
Length = 1471
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 995 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1052
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1053 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1090
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1091 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1148
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1149 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1196
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 795 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 852
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 853 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 908
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 909 VLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 968
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 969 IIRFTDGITAD 979
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1195 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1252
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1253 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1290
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1291 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1348
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1349 GEGFGQDTVYN 1359
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 702 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 761
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 762 YATGRKDIIRFTDGITAD 779
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1255 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 1314
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1315 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1374
Query: 390 GLS 392
+
Sbjct: 1375 KAA 1377
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 855 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGAE 914
Query: 330 ANE-----HKQDFLSD------VERLRFADQCIDSVNVKQRSILEY 364
N+ D L +E +D + Q ++ Y
Sbjct: 915 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 960
>gi|313904345|ref|ZP_07837723.1| lipolytic protein G-D-S-L family [Eubacterium cellulosolvens 6]
gi|313470895|gb|EFR66219.1| lipolytic protein G-D-S-L family [Eubacterium cellulosolvens 6]
Length = 425
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 68/193 (35%), Gaps = 29/193 (15%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F Y+ + +L F Q + F + G R + FD Y+ Y +L
Sbjct: 238 SVFDFDAYMKYNPELKAKFGMDK---QAAYEDFVDNGMTMRRRASEEFDVCSYMNEYPEL 294
Query: 496 RNVFGSDRGAAARHYITHGVKEGRN-------------------PDAFKALEYIASHEDL 536
R + D R ++ G + GR+ + Y+ + +
Sbjct: 295 RRKYKGDVAEFYRDWMNEGKEAGRHGTGCDKMVDPLTEYNGVDYSAIYNYDYYVERYSYI 354
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
+ +A + + F N+G EGR + F+ Y +DL F + + +HY
Sbjct: 355 KDRYAGDDE---GALEQFVNYGIREGRQASEEFDVRAYRAYNEDLREEFQGNFTQYVEHY 411
Query: 595 ITHGMKEGRALGI 607
+ G+ E R I
Sbjct: 412 LISGINEHRRTTI 424
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 68/191 (35%), Gaps = 28/191 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 456
FD Y+ +L+ FG D+ AA ++ +G+ R F Y+ + +L
Sbjct: 239 VFDFDAYMKYNPELKAKFGMDKQAAYEDFVDNGMTMRRRASEEFDVCSYMNEYPELRR-- 296
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR--------------------FVTFDSYLYLGSYDDLR 496
V + N G E GR ++ Y+ Y ++
Sbjct: 297 -KYKGDVAEFYRDWMNEGKEAGRHGTGCDKMVDPLTEYNGVDYSAIYNYDYYVERYSYIK 355
Query: 497 NVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + D A ++ +G++EGR + F Y A +EDL F +H+
Sbjct: 356 DRYAGDDEGALEQFVNYGIREGRQASEEFDVRAYRAYNEDLREEFQGN---FTQYVEHYL 412
Query: 556 NFGYEEGRSIT 566
G E R T
Sbjct: 413 ISGINEHRRTT 423
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 55/172 (31%), Gaps = 24/172 (13%)
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D + E + ++ + Y Y +L + DV E + + G
Sbjct: 256 FGMDKQAAYEDFVDNGMTMRRRASEEFDVCSYMNEYPELRRKYKGDVAEFYRDWMNEGKE 315
Query: 393 EGR--------------------DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
GR ++ Y+ Y +++ + D A ++ +G++
Sbjct: 316 AGRHGTGCDKMVDPLTEYNGVDYSAIYNYDYYVERYSYIKDRYAGDDEGALEQFVNYGIR 375
Query: 433 EGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
EGR F Y A +EDL F +H+ G E R T
Sbjct: 376 EGRQASEEFDVRAYRAYNEDLREEFQGN---FTQYVEHYLISGINEHRRTTI 424
>gi|307944841|ref|ZP_07660179.1| hemolysin-type calcium-binding region [Roseibium sp. TrichSKD4]
gi|307772055|gb|EFO31278.1| hemolysin-type calcium-binding region [Roseibium sp. TrichSKD4]
Length = 6021
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 3/165 (1%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI G+D L +Y + + N + E+V GS D
Sbjct: 5050 DTIIGGAGNDTLSGGAGNDTLSYAGNSGAVTVDLSANSNNQGDTI-SGFENVTGSDHADT 5108
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--VYDANEHKQDF 337
+ GNSA N +GND G +G DT A +++ + ++ D
Sbjct: 5109 LTGNSAANTIIGGAGNDTISGGAGNDTLSGGAGVDTLSYAGAASSVTADLSSNTNNQGDT 5168
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+S E L +D + L A + L G D +
Sbjct: 5169 ISGFENLIGSDHADTLTGTNSANTLTGGAGNDTLTGGGGADTVSA 5213
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 60/177 (33%), Gaps = 12/177 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G D D + G V IDL + + S ++ IE
Sbjct: 1319 SDTLIGGAGADTLSGGAGSDTADYSG-GSVAVVIDLASGTASGGDADGDTLS-----SIE 1372
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ D + GN+ N GNDV DG + DT +IV
Sbjct: 1373 NATGTDHADTLTGNADKNTLIGGGGNDVLDGGANADTLIGGDGIDTVTYENSAGNVIVNL 1432
Query: 330 ANEHKQ------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A+ D LS +E + +DQ + ++L A Y+ L G D
Sbjct: 1433 ASGTGANGDAQGDILSQIENVIGSDQSDVIEGDFRDNVLTGGAGYDTLTGNEGDDQL 1489
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 64/190 (33%), Gaps = 5/190 (2%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
A + G+ + TI G+D L NY T +S+
Sbjct: 5613 ATGSAQGDTLTGDASANVIDGGAGDDTIAGGSGNDTLSGGTGTDTLNYAAATTAVVASLA 5672
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + E++ GS+ D + G+++ NV +GND +G +G DT +
Sbjct: 5673 DNSNNQGDTI-SGFENLTGSAQGDTLTGDASANVIDGGAGNDTIEGGAGNDTLLGGTGTD 5731
Query: 315 LYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
A+ V D + + D +S E L + + + A + +
Sbjct: 5732 TLSYASASGAVTVNLADNSNDQGDTISGFENLTGSAHDDTLTGNSSANTITGGAGNDTIS 5791
Query: 373 QVIGQDVFES 382
G D +
Sbjct: 5792 GGSGADTVNA 5801
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 28/208 (13%)
Query: 190 AVQKIYGAPKGS----LGNNIYKIEVQQKDS-----PFIQTIYDSGGDDLLDLTLIGGVK 240
++++ YGA + GN+ + + T+ G D L T GG
Sbjct: 3910 SIERYYGANSHADTMIAGNDSAYFDGAGGNDILTGGSAADTLIGGNGSDTL--TGNGGND 3967
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
SI G + + TI ++V G +GND + G + ++ +G+D+ G
Sbjct: 3968 -----------SIQGNDGDDTIDAGDGNDNVTGGAGNDTITGGAGDDTIDTGAGDDLVYG 4016
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------DFLSDVERLRFADQCIDSV 354
+G DT + +A+++ D +S E L +
Sbjct: 4017 GAGADTLSGGTGADTLDYSASSDAVVIDLGANTASGGDAEGDSISGFETLIGSAHDDTLT 4076
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L + L G D
Sbjct: 4077 GDGNANTLSGGDGNDTLSGGGGADTING 4104
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 9/191 (4%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN+ TI+ G D +D +Y + ++ G
Sbjct: 4954 TGGAGNDTLSGGGGADTVNGGSGDDTIHALGDGDTIDGGADTDTVSYAAATSGVAVTL-G 5012
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI+ +E++ GSS D + G+ + NV +G+D G +G DT A +
Sbjct: 5013 AAGDDTISN---VENLTGSSHADTLTGDVSANVIDGGTGDDTIIGGAGNDTLSGGAGNDT 5069
Query: 316 YKIYRFENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
A+ V + + ++ D +S E + +D + + A + +
Sbjct: 5070 LSYAGNSGAVTVDLSANSNNQGDTISGFENVTGSDHADTLTGNSAANTIIGGAGNDTISG 5129
Query: 374 VIGQDVFESMK 384
G D
Sbjct: 5130 GAGNDTLSGGA 5140
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 67/214 (31%), Gaps = 33/214 (15%)
Query: 197 APKGSLGNNIYKIE--------VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI 243
A + G+ I E + TI G+D + + TL GG
Sbjct: 5085 ANSNNQGDTISGFENVTGSDHADTLTGNSAANTIIGGAGNDTISGGAGNDTLSGGAGVDT 5144
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ SS+ + T Q I E+++GS D + G ++ N +GND G
Sbjct: 5145 LSYAGAASSVTADLSSNTNNQGDTISGFENLIGSDHADTLTGTNSANTLTGGAGNDTLTG 5204
Query: 301 SSGLDTFFYYAPSY-----------------LYKIYRFENAIIVYDANEHKQDFLSDVER 343
G DT + Y + + D +S+VE
Sbjct: 5205 GGGADTVSAGSGDDTINALGDGDTIDGGADTDTVSYASATGGVTATLSGSADDTISNVEN 5264
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
L + ++++ A + +I G
Sbjct: 5265 LTGSSHADTLTGDASANVIDGGAGNDTIIGGAGN 5298
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 12/171 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ G D L G ++L T + + E
Sbjct: 5562 DDTISGGAGNDTLIGGAGTDTLSYA-AAGSAVTVNLATNANNQGDTISG---------FE 5611
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL--YKIYRFENAIIV 327
+ GS+ D + G+++ NV +G+D G SG DT + Y +
Sbjct: 5612 NATGSAQGDTLTGDASANVIDGGAGDDTIAGGSGNDTLSGGTGTDTLNYAAATTAVVASL 5671
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + ++ D +S E L + Q ++++ A + + G D
Sbjct: 5672 ADNSNNQGDTISGFENLTGSAQGDTLTGDASANVIDGGAGNDTIEGGAGND 5722
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 86/238 (36%), Gaps = 31/238 (13%)
Query: 218 FIQTIYDSGGDDLLDLTLIG-GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
T+ G DL+D + V Y+D + IGG + T+ T IE++ GS+
Sbjct: 1854 GADTLDGGDGVDLVDYSDSSTAVTAYLD---GVTTGIGGSAQGDTL---TDIENLTGSAF 1907
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------YDA 330
+D ++GN++ N +GNDV +G G DT + +A+ V
Sbjct: 1908 HDHLVGNTSANTLTGGAGNDVLEGRGGADTLIGGTGTDTADYSASNSAVTVNLETGMGTG 1967
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + D LS++E + +D S L + L+ G D
Sbjct: 1968 GDAEGDTLSEIEEVIGSDYNDTLTASTTGSTLYGEDGDDTLVGGDGNDELHGGSD----- 2022
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
D+ DDL G+DR G E ++Y+AS
Sbjct: 2023 --------DDTLTGGAGNDDLYGDAGADRFIGG-----AGSDEHYGGTGIDTVDYLAS 2067
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 57/167 (34%), Gaps = 6/167 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I +G D +D Y + + G + + +E+++GS D
Sbjct: 4612 DVIAATGDGDTIDGGFDTDTVTYAAASAGVTVGLDGTGDDTL----SNVETLIGSDHADT 4667
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--VYDANEHKQDF 337
+ GNS+ N GND+ DG +G DT A + A+ + + D
Sbjct: 4668 LTGNSSANTISGGDGNDIIDGGAGSDTLSGGAGNDTLSYASTAGAVTANLATNANDQGDT 4727
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+S E L +D +I+ A + + G D
Sbjct: 4728 ISGFENLTGSDHDDALTGDATSNIISGGAGDDTISGGGGADTLAGGA 4774
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 59/201 (29%), Gaps = 27/201 (13%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---------WSSIGGYEKNM 260
+ T+ G D L G +DL++ + + ++ G + N
Sbjct: 4758 DDTISGGGGADTLAGGAGTDTLSYAAAVGS-VTVDLSSNTNNQSDTISGFENLVGSDHND 4816
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------ 314
T+ + G +GND + G + +GND G +G DT +
Sbjct: 4817 TLTGDAGSNDIDGGAGNDTINGGGGADTLTGGAGNDTLSGGAGTDTVTAGSGDDTIEALG 4876
Query: 315 -----------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
Y ++ + D +S+VE L + + ++
Sbjct: 4877 DGDTIDGGADTDTVTYASASSGVTAALGGSGDDTISNVENLTGSSHADTLTGDVTANEID 4936
Query: 364 YTASYEDLIQVIGQDVFESMK 384
+ + G D
Sbjct: 4937 GGTGNDTINGGGGADTLTGGA 4957
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 10/169 (5%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI G D D + +DL+ + + + + N I + +E+VVG+SGND
Sbjct: 2881 DTIDGGAGVDTADYSS-SVDAVTLDLSLTT-AQVSSGDANGDIL--SSVENVVGTSGNDT 2936
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK------IYRFENAIIVYDANEH 333
+ GN+ N G+D+F S+ DT + I V +N
Sbjct: 2937 LTGNAEANRLEGGDGDDLFIASAENDTVVGGLGTDTVDYSGATNIVDANLGTGVISSNGL 2996
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D ++ +E + + Q + L A + + G D
Sbjct: 2997 GNDSVTGIENVIGSAQADTITGDANSNALTGAAGNDTISGAGGADTITG 3045
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 81/235 (34%), Gaps = 23/235 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G+N+ + T+ GG D T +DL+T S G E
Sbjct: 546 TGNTGDNV------LEGGAGADTLTGGGGVDTAAYTQ-SSAGVRVDLSTGDHSG-GDAEG 597
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
++ T I ++ GS +D + G+ A+N GND+ G +G D S +
Sbjct: 598 DVL----TGITNLRGSVYDDQLTGDGADNRLEGGDGNDLLHGGAGADELVGGIGSDIADY 653
Query: 319 YRFENAII-----VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + + D L+ +E L + + + + A + +
Sbjct: 654 QGSDAVNVDLQAGTATGGDAQGDTLTSIEGLIGSSNDDTLLGSSANNTISGGAGNDIIAG 713
Query: 374 VIGQD--VFESMKHFYEFGLSE----GRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
V G + ++ + GL E G DS Y+ S + G
Sbjct: 714 VGGTNTLRGDAGDDTFTGGLGEDAIDGGSGAADSITYVASNTGVTVNLTIGTGQG 768
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 8/139 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G T++ +++ G ND + G + ++ SG+D +G +G DT A
Sbjct: 2693 TLRGEAGEDTLSGGDGADTLEGGDANDTLQGGAGDDTLDGGSGDDSLEGGAGADTITGGA 2752
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ--------DFLSDVERLRFADQCIDSVNVKQRSILE 363
+ N + V AN Q D +S VE + + + +
Sbjct: 2753 GTDTVSYAGSANGVTVDLANTGAQVSGGDANGDTISGVENILGSSSSDTLTGDDNSNEIV 2812
Query: 364 YTASYEDLIQVIGQDVFES 382
A + + G D
Sbjct: 2813 AGAGNDIVSGGAGDDTLSG 2831
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 12/185 (6%)
Query: 203 GNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
GN+++ S T+ G D + IDL+ ++ G +
Sbjct: 2245 GNDVHDGGAGNDTLLGSAGADTLIGGAGSDTVSYA-ASSAAVTIDLSADAAGDASGGDAE 2303
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
IE+V+GS+ ND + G+S N +G+D ++ DT A +
Sbjct: 2304 GDDL--DQIENVIGSAHNDTLTGDSGVNRIEGGAGDDTVFATASNDTLIGGAGTDTISYV 2361
Query: 320 RFENAIIV------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ V D + + E + + + + + +
Sbjct: 2362 AATGSVTVDLGAETASGGGVGTDSVREFENIVGSANDDTLTGSSLDNTISGGVGNDVIDG 2421
Query: 374 VIGQD 378
G D
Sbjct: 2422 AAGDD 2426
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 56/181 (30%), Gaps = 6/181 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
TI GDD + ++ GG S S +
Sbjct: 4090 NDTLSGGGGADTINGGSGDDEIVGGADGDSVDGGAGTDTISYAGSSSGVDALLTGTADDT 4149
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E+++GS+ +D + G++ +N G+D G G D A
Sbjct: 4150 ILNVENLIGSAHDDTLRGDTGDNEITGGDGDDTISGLGGNDVLDGGAGVDTLSYATMGAV 4209
Query: 325 IIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + Q D +S E L + Q D + + + + + G D+ +
Sbjct: 4210 VANLSTGANNQGDTISGFENLEGSQQGDDLTGDAGVNTITGGDGNDTIAGLGGADILDGG 4269
Query: 384 K 384
Sbjct: 4270 A 4270
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 60/205 (29%), Gaps = 26/205 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--SWSSI 253
GA + G I TI G D + + + + S++
Sbjct: 5372 GADTINAGAGTDTIHALGDGD----TIDGGSGTDTVSYASASAGVSITLGGSADDTISNV 5427
Query: 254 GGYEKNM------------TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++ I +++ G +GND + G N+ +G D +
Sbjct: 5428 ENLTGSVHNDTLTGDATANVIDGGAGNDTISGGNGNDTLTGGLGNDTLSGGAGTDTINAG 5487
Query: 302 SGLDTF--------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
SG DT Y ++ + + D +S+VE L +
Sbjct: 5488 SGDDTIHALGDGDTINGGADTDTVTYASASSGVTATLGGAEDDTISNVENLTGSSHGDVL 5547
Query: 354 VNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ A + + G D
Sbjct: 5548 TGDGSDNTIDGGAGDDTISGGAGND 5572
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 3/156 (1%)
Query: 230 LLDLTLIGGVK--NYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + G N +L +++ + G ++N I +++ G +G D + GN +
Sbjct: 1705 TADGSHATGDTLLNIENLTGSNFNDTLSGDDQNNVIEGGLGDDTIAGEAGADTLEGNGGS 1764
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V G D DG G DT Y S I V E D L+++E +
Sbjct: 1765 DVLIGGLGADQLDGGDGNDTASYSGSSAGVVIDLNLAGAQVSAGTEAHGDVLTNIENITG 1824
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+D +++ A + L +G D +
Sbjct: 1825 SDFDDTLTGDDVANMIRAGAGDDVLDGGLGADTLDG 1860
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 56/186 (30%), Gaps = 16/186 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-------IGGYEKNM 260
T+ G D + G ++L + + ++ + E +
Sbjct: 1396 GGNDVLDGGANADTLIGGDGIDTVTYENSAG-NVIVNLASGTGANGDAQGDILSQIENVI 1454
Query: 261 TIAQHTVIE------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
Q VIE + G +G D + GN ++ GND G +G DT A S
Sbjct: 1455 GSDQSDVIEGDFRDNVLTGGAGYDTLTGNEGDDQLIGGDGNDTLRGGAGADTLDGGAGSD 1514
Query: 315 --LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y I + + D +E L + + L + L
Sbjct: 1515 TADYSTETTAVTIDLDAGTSNTGDTFISIENLTGTSEDDTLTGTDDANTLSGGLGNDVLN 1574
Query: 373 QVIGQD 378
+ G D
Sbjct: 1575 GLDGAD 1580
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 43/150 (28%), Gaps = 17/150 (11%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G T+ + G +GND + G + +GND G G DT +
Sbjct: 4916 NLTGSSHADTLTGDVTANEIDGGTGNDTINGGGGADTLTGGAGNDTLSGGGGADTVNGGS 4975
Query: 312 PSY-----------------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
Y + + D +S+VE L +
Sbjct: 4976 GDDTIHALGDGDTIDGGADTDTVSYAAATSGVAVTLGAAGDDTISNVENLTGSSHADTLT 5035
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++++ + +I G D
Sbjct: 5036 GDVSANVIDGGTGDDTIIGGAGNDTLSGGA 5065
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 5/157 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G+D + + GG E ++ G + T++ + V G G D + G
Sbjct: 3028 AAGNDTI--SGAGGADTIT--GDEGDDTLSGDGGDDTVSGGEGNDHVSGGDGADTLSGGV 3083
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ +G D+ DG G DT Y S + A A D +++VE L
Sbjct: 3084 GDDRLVGGAGADIIDGGDGTDTVDYSGSSAAVTV-DLGLATQAAGAGVEAGDQITNVENL 3142
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ +++ + + G D E
Sbjct: 3143 DGSAFNDTLSGDAGANLIRGLDGGDAINGAAGNDEIE 3179
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 15/193 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSS---- 252
+ G + + ++ I S D L D + D+ +
Sbjct: 2771 ANTGAQVSGGDANGDTISGVENILGSSSSDTLTGDDNSNEIVAGAGNDIVSGGAGDDTLS 2830
Query: 253 -------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G N + ++++ G G+D + G + ++ G D DG +G+D
Sbjct: 2831 GGDGDDTLSGNTGNDALLGGAGVDTLSGDEGDDTLSGGAGDDTLIGGVGEDTIDGGAGVD 2890
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y + + V + + D LS VE + + + LE
Sbjct: 2891 TADYSSSVDAVTLDLSLTTAQVSSGDANG-DILSSVENVVGTSGNDTLTGNAEANRLEGG 2949
Query: 366 ASYEDLIQVIGQD 378
+ I D
Sbjct: 2950 DGDDLFIASAEND 2962
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 62/177 (35%), Gaps = 12/177 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ + G D+ D + V +DLN + S G E + + IE V+G
Sbjct: 889 QGGAGADDLIGGAGFDVADYSNSSAV--TVDLNISAAQSGGEAEGDTL----SDIEGVIG 942
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+DV G++ +N F +GND G G DT + + ++++
Sbjct: 943 GAGDDVFTGDANDNSFVGGAGNDWARGGGGADTLSGGVGTDTVSYSLSDEGVVLHLDGTA 1002
Query: 334 KQ------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D +S E + + + + LI G D FE
Sbjct: 1003 STGGTAEGDQVSGFEVVDGSAHDDTVYGTSADEVFRGAGGDDTLIGGGGADTFEGGA 1059
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 16/178 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE---------SWSSIGGYEKNM 260
+ T+ G D D + IDL+ S ++ G ++
Sbjct: 1495 NDTLRGGAGADTLDGGAGSDTADYSTET-TAVTIDLDAGTSNTGDTFISIENLTGTSEDD 1553
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ ++ G GNDV+ G + GNDV +G +G DT + +
Sbjct: 1554 TLTGTDDANTLSGGLGNDVLNGLDGADTLLGGGGNDVLNGGAGADTIIGGSGIDVVDYSD 1613
Query: 321 FENAIIVYDANEHKQ------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ V Q D LS+VE + + + + A + L+
Sbjct: 1614 SSAGVRVNLETNSNQNGDAEGDNLSEVESITGSGFDDILTGDAVANTILGGAGADVLV 1671
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 11/172 (6%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ T+ G+D + DL+ + +S G E + +E++ GSS
Sbjct: 486 AAGADTVTGGAGEDTVSYR-DSASAVTADLSNNANNSGGYAEGDEYFG----VENLTGSS 540
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+D + GN+ +NV +G D G G+DT Y S ++ DA
Sbjct: 541 FSDTLTGNTGDNVLEGGAGADTLTGGGGVDTAAYTQSSAGVRVDLSTGDHSGGDAEGDVL 600
Query: 336 DFLSDVERLRFADQCIDSVNVK------QRSILEYTASYEDLIQVIGQDVFE 381
++++ + DQ +L A ++L+ IG D+ +
Sbjct: 601 TGITNLRGSVYDDQLTGDGADNRLEGGDGNDLLHGGAGADELVGGIGSDIAD 652
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 19/174 (10%)
Query: 227 GDDLLDL-TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGSSGNDVVIG 282
G+D +D + Y+ NT ++ A +E+V GS+ +D +IG
Sbjct: 734 GEDAIDGGSGAADSITYVASNTGVTVNLTIGTGQGGHAAGDTYANLENVTGSAFDDTLIG 793
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------D 336
++A+NV G+D +G G DT A S A+ V + D
Sbjct: 794 STADNVLSGGDGDDYLEGGQGADTLSGGAGSDTVSYETANAAVQVDLSTGTATGSDATGD 853
Query: 337 FLSDVERL---RFADQCIDSVNVK------QRSILEYTASYEDLIQVIGQDVFE 381
LS +E L + D+ + +L+ A +DLI G DV +
Sbjct: 854 TLSSIENLVGSAYGDELTGDASDNRFEGGAGDDVLQGGAGADDLIGGAGFDVAD 907
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 26/199 (13%)
Query: 204 NNIYKIEVQQKDSPFIQTI--YDSGGDDLLDLTLIGGVKNYIDLNTESWS------SIGG 255
+++Y + + Y G D +D L +L++ S S I G
Sbjct: 2033 DDLYGDAGADRFIGGAGSDEHYGGTGIDTVDY-LASTAAVTANLDSGSGSAGDAAGDIYG 2091
Query: 256 YEKNMT----------------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+N+ + + ++G+ G+D ++G + ++ +G D+
Sbjct: 2092 DVENLVGTAYDDRLTGDGGSNVLTAGAGDDVLIGNGGDDTLLGEAGDDTLIGGAGADILT 2151
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G G+DT Y + + A + + D L+ +E L+ ++Q +
Sbjct: 2152 GGDGVDTADYSGSTNAVTV-DLNLATQATSSGDESGDVLTGIENLKGSEQADTLIGDGAA 2210
Query: 360 SILEYTASYEDLIQVIGQD 378
+ + + + G D
Sbjct: 2211 NRISGGLENDTISGGAGDD 2229
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 61/202 (30%), Gaps = 24/202 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE------- 248
G + G+ + ++ G+D D + +DL T
Sbjct: 1212 GDNTLTGGDG----DDVLVGRGGADALFGGAGNDTADYS-DSESAIELDLATGVGAGGDA 1266
Query: 249 ------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
S +I E + IA + G G+D + G ++ SG+D G +
Sbjct: 1267 DGDTFDSIETIIATEHDDVIAGDAQDNDLRGLGGDDTLSGRDGDDTLSGGSGSDTLIGGA 1326
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------DFLSDVERLRFADQCIDSVNV 356
G DT A S A+++ A+ D LS +E D
Sbjct: 1327 GADTLSGGAGSDTADYSGGSVAVVIDLASGTASGGDADGDTLSSIENATGTDHADTLTGN 1386
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
++ L + L D
Sbjct: 1387 ADKNTLIGGGGNDVLDGGANAD 1408
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 9/165 (5%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGSSGNDVVIGN 283
G D L +Y N + + A IE++VGS+ D + G+
Sbjct: 814 GADTLSGGAGSDTVSYETANAAVQVDLSTGTATGSDATGDTLSSIENLVGSAYGDELTGD 873
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------DF 337
+++N F +G+DV G +G D A + + + + + D
Sbjct: 874 ASDNRFEGGAGDDVLQGGAGADDLIGGAGFDVADYSNSSAVTVDLNISAAQSGGEAEGDT 933
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
LSD+E + + A + G D
Sbjct: 934 LSDIEGVIGGAGDDVFTGDANDNSFVGGAGNDWARGGGGADTLSG 978
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 11/126 (8%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G D +D + G N +D N + N ++ T IE+V+GS+ D
Sbjct: 2962 DTVVGGLGTDTVDYS---GATNIVDANLGTGVISSNGLGNDSV---TGIENVIGSAQADT 3015
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-----VYDANEHK 334
+ G++ +N ++GND G+ G DT ++ + + +
Sbjct: 3016 ITGDANSNALTGAAGNDTISGAGGADTITGDEGDDTLSGDGGDDTVSGGEGNDHVSGGDG 3075
Query: 335 QDFLSD 340
D LS
Sbjct: 3076 ADTLSG 3081
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 16/142 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ +++ G +G+D VIG ++ G+D G SG DTF+ A
Sbjct: 3205 MDGGDGVDTVYGGEGNDTLDGGAGDDTVIGGLGDDTLSGGGGDDAVSGGSGADTFYVDAG 3264
Query: 313 SYLYKIYRFENAIIVYDANEHKQ----------------DFLSDVERLRFADQCIDSVNV 356
S + + + + D S +E + +D
Sbjct: 3265 SDQLDGGEGIDTLSLENETAGVTLNLGTPANNVGTNVEGDTYSSIENITGSDHDDHLTGD 3324
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
+ +++ A + L+ G D
Sbjct: 3325 LENNVINAGAGDDTLVGAQGGD 3346
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 10/166 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGSSGNDVVI 281
G D LD +Y ++ AQ T IE + GS +D +
Sbjct: 3704 GAGADALDGGDGEDTASYRTSAAGVSVNLATNTATGGDAQGDTYTSIEVLQGSDHDDTLF 3763
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------ 335
G++ +N + G+DV +G +G DT A + + V N
Sbjct: 3764 GDAEDNDLYGHDGDDVINGGAGHDTLVGGAGNDTLDYSGSSAGVSVNLQNNSASGGDAQG 3823
Query: 336 DFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D S E + +D + + + +IL + L G D
Sbjct: 3824 DIFSGFENVTGSDHRDWLTGRDGEDNILSGAGGNDILYGSTGADQL 3869
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 9/148 (6%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + + + I G +N TI+ ++++G +G+D + G N+V +GND
Sbjct: 2197 GSEQADTLIGDGAANRISGGLENDTISGGAGDDTLLGEAGDDTLDGGVGNDVHDGGAGND 2256
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
GS+G DT A S A+ + + + D + + ++
Sbjct: 2257 TLLGSAGADTLIGGAGSDTVSYAASSAAVTIDLSADAAGD---------ASGGDAEGDDL 2307
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMK 384
Q + +A + L G + E
Sbjct: 2308 DQIENVIGSAHNDTLTGDSGVNRIEGGA 2335
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 9/182 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH--- 265
+ + I GDD + L + ++T S++++G N++ +
Sbjct: 4162 DDTLRGDTGDNEITGGDGDDTISGLGGNDVLDGGAGVDTLSYATMGAVVANLSTGANNQG 4221
Query: 266 ---TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ E++ GS D + G++ N GND G G D A S
Sbjct: 4222 DTISGFENLEGSQQGDDLTGDAGVNTITGGDGNDTIAGLGGADILDGGAGSDTVNYSAAT 4281
Query: 323 NAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+++V A ++ D LS+ E + +D + + A + + G D
Sbjct: 4282 GSVVVDLATQTNNQGDTLSNFEGVIGSDNADTLTGSSVANEISAGAGDDTITLAGGADTV 4341
Query: 381 ES 382
++
Sbjct: 4342 DA 4343
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G + +D + G S ++ ++G DV DG G+DT Y S I +A
Sbjct: 1123 DTLIGGTSDDTLRGGSRDDTLTGNAGADVLDGGDGIDTVSYSGSSAAVTIDLAADAANDA 1182
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D L ++E + + + L + L+ G D
Sbjct: 1183 SGGDAAGDDLFNIENVVGSAHDDHLSGDDGDNTLTGGDGDDVLVGRGGADAL 1234
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 63/199 (31%), Gaps = 33/199 (16%)
Query: 198 PKGSLGNNIYKIE--------VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
+ G+ I E I G+D + + TL+GG
Sbjct: 5674 NSNNQGDTISGFENLTGSAQGDTLTGDASANVIDGGAGNDTIEGGAGNDTLLGGTGTDTL 5733
Query: 245 LNTESWSSIGGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ + + Q I E++ GS+ +D + GNS+ N +GND G
Sbjct: 5734 SYASASGAVTVNLADNSNDQGDTISGFENLTGSAHDDTLTGNSSANTITGGAGNDTISGG 5793
Query: 302 SGLDTFFYYAPSY-----------------LYKIYRFENAIIVYDANEHKQDFLSDVERL 344
SG DT + + Y + + + D +S+VE L
Sbjct: 5794 SGADTVNAGSGNDTVNALGDGDTIDGGADTDTVSYASASTGVTATLGGSEDDTISNVENL 5853
Query: 345 RFADQCIDSVNVKQRSILE 363
+ +++
Sbjct: 5854 TGSAHNDTLSGDASANVIS 5872
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 65/191 (34%), Gaps = 12/191 (6%)
Query: 200 GSLGNNIYKIEVQQKDS-PFIQTIYD--SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G++++ + + GG D L + +Y + + G
Sbjct: 942 GGAGDDVFTGDANDNSFVGGAGNDWARGGGGADTLSGGVGTDTVSYSLSDEGVVLHLDGT 1001
Query: 257 EKNMTIAQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
A+ + E V GS+ +D V G SA+ VF + G+D G G DTF A +
Sbjct: 1002 ASTGGTAEGDQVSGFEVVDGSAHDDTVYGTSADEVFRGAGGDDTLIGGGGADTFEGGAGT 1061
Query: 314 YLYKIYRFENAIIV------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + V + + D +ERL + S+L+
Sbjct: 1062 DTVSYETAGSGVSVNLETGATGSGDEAGDTFDSIERLLGSVHDDTLTAANAGSVLDGNEG 1121
Query: 368 YEDLIQVIGQD 378
+ LI D
Sbjct: 1122 DDTLIGGTSDD 1132
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 66/216 (30%), Gaps = 45/216 (20%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQH 265
+ TI GG D +D +Y + N + + G + + A
Sbjct: 3587 GWAWTYQLGAGNDTIEAGGGADTIDGGTGTDTASYYNSNAGVTVNLTVSGAQTSSGHASG 3646
Query: 266 TVIESV-------------------------------VGSSGNDVVIGNSANNVFFESSG 294
V+ ++ G +G+D + G +++ +G
Sbjct: 3647 DVLSNIENLVGAHEYSNTLTGDASANSLTGGREDDTLSGGAGDDSLFGEDGDDLLTGGAG 3706
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD------ 348
D DG G DT Y + + N DA D + +E L+ +D
Sbjct: 3707 ADALDGGDGEDTASYRTSAAGVSVNLATNTATGGDAQG---DTYTSIEVLQGSDHDDTLF 3763
Query: 349 ---QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D ++ A ++ L+ G D +
Sbjct: 3764 GDAEDNDLYGHDGDDVINGGAGHDTLVGGAGNDTLD 3799
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 58/191 (30%), Gaps = 37/191 (19%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--------------- 254
+ + T+ G D + G +DL E+ S G
Sbjct: 2337 DDTVFATASNDTLIGGAGTDTISYVAATGS-VTVDLGAETASGGGVGTDSVREFENIVGS 2395
Query: 255 -------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G + TI+ + + G++G+D ++G ++ +G D DG G DT
Sbjct: 2396 ANDDTLTGSSLDNTISGGVGNDVIDGAAGDDTLLGEDGDDTLRGGAGTDTLDGGVGDDTL 2455
Query: 308 FYYAPSYL------YKIYRFENAIIVYDANEHKQ--------DFLSDVERLRFADQCIDS 353
+ + + + + V E D L+ +E + Q
Sbjct: 2456 HGGDGADVLTGGAGTDVADYAGSASVNVNLETGTGTGGQAEGDTLTGIENVSGGSQDDTL 2515
Query: 354 VNVKQRSILEY 364
++L
Sbjct: 2516 TGDASANVLSG 2526
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 57/187 (30%), Gaps = 17/187 (9%)
Query: 200 GSLGNNIY--KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ + +Y S T G D+++ + +DL + ++ G E
Sbjct: 3439 GTGDDTVYAGSGNDWMTGSTGTDTYDGGTGLDIVNYS-ASSAAVTVDLRLGTQAASAGDE 3497
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
IE + GS+ +D GNSANN F G+ G DT +
Sbjct: 3498 SGDVY---VSIEGIYGSAFDDTFYGNSANN---------TFYGNGGTDTLDLSEETAAVS 3545
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVI 375
N D ++ +E D N + A + +
Sbjct: 3546 SSWATNGWGNVSGTSTGTDSVTGIETYIATDYNDTFSHANAGWAWTYQLGAGNDTIEAGG 3605
Query: 376 GQDVFES 382
G D +
Sbjct: 3606 GADTIDG 3612
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 55/206 (26%), Gaps = 31/206 (15%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWS-SIGGYEKNMTIAQ 264
+ + TI GDD + G G L + S +
Sbjct: 4494 NDTLDGAGGVDTITAGDGDDTITGRGDGDTIDGGAGTDTLTYATASAGVDVTLGGSGDDA 4553
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---------------------- 302
+ +E ++GS D + G++A N +GND G +
Sbjct: 4554 VSNVEVLIGSGHADTLTGDAAANTISGGAGNDTVSGGAGNDTLTGGTGTDTINGGGGDDV 4613
Query: 303 ----GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G Y +A + + D LS+VE L +D
Sbjct: 4614 IAATGDGDTIDGGFDTDTVTYAAASAGVTVGLDGTGDDTLSNVETLIGSDHADTLTGNSS 4673
Query: 359 RSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + G D
Sbjct: 4674 ANTISGGDGNDIIDGGAGSDTLSGGA 4699
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 7/171 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + I+ + S +D L + G D + + G + N + +
Sbjct: 1967 GGDAEGDTLSEIEEVIGSDYNDTLTASTTGSTLYGEDGDDT----LVGGDGNDELHGGSD 2022
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G +GND + G++ + F +G+D G +G+DT Y A + +
Sbjct: 2023 DDTLTGGAGNDDLYGDAGADRFIGGAGSDEHYGGTGIDTVDYLASTAAVTANLDSGSGSA 2082
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
DA D DVE L ++L A + LI G D
Sbjct: 2083 GDAAG---DIYGDVENLVGTAYDDRLTGDGGSNVLTAGAGDDVLIGNGGDD 2130
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 10/176 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D L G +L + + G + +
Sbjct: 4683 NDIIDGGAGSDTLSGGAGNDTLSYASTAGA-VTANL-ATNANDQGDTISGFENLTGSDHD 4740
Query: 270 SVVGSSGNDVVIGNSANNVF-FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +I A + G D G +G DT Y A + N
Sbjct: 4741 DALTGDATSNIISGGAGDDTISGGGGADTLAGGAGTDTLSYAAAVGSVTVDLSSNT---- 4796
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ D +S E L +D + ++ A + + G D
Sbjct: 4797 ---NNQSDTISGFENLVGSDHNDTLTGDAGSNDIDGGAGNDTINGGGGADTLTGGA 4849
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 12/183 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
TI G D++D + ++L T S + N++
Sbjct: 1586 GGNDVLNGGAGADTIIGGSGIDVVDYS-DSSAGVRVNLETNSNQNGDAEGDNLS-----E 1639
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ES+ GS +D++ G++ N +G DV G +G DT AI V
Sbjct: 1640 VESITGSGFDDILTGDAVANTILGGAGADVLVGGNGGDTLDGGDGIDRVDYTSSVAAIEV 1699
Query: 328 ------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D + D L ++E L ++ Q +++E + + G D E
Sbjct: 1700 DLEAGTADGSHATGDTLLNIENLTGSNFNDTLSGDDQNNVIEGGLGDDTIAGEAGADTLE 1759
Query: 382 SMK 384
Sbjct: 1760 GNG 1762
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 33/206 (16%)
Query: 200 GSLGNNIYKIE--------VQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDL 245
+ G+ I E + TI G+D + D+ G + ++
Sbjct: 4218 NNQGDTISGFENLEGSQQGDDLTGDAGVNTITGGDGNDTIAGLGGADILDGGAGSDTVNY 4277
Query: 246 NTESWSSIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + S + T+ E V+GS D + G+S N +G+D + G
Sbjct: 4278 SAATGSVVVDLATQTNNQGDTLSNFEGVIGSDNADTLTGSSVANEISAGAGDDTITLAGG 4337
Query: 304 LDTFFYYAPSYLYKI-----------------YRFENAIIVYDANEHKQDFLSDVERLRF 346
DT Y ++ + D +S++E L
Sbjct: 4338 ADTVDAGTGDDTISALGTGATIDGGAGSDTLSYENSSSGVSITIGGAGDDDVSNIENLTG 4397
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLI 372
+D + + + +
Sbjct: 4398 SDHDDTLTGDTNSNNISGGDGNDTIA 4423
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 50/162 (30%), Gaps = 44/162 (27%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I G D +D + +DL + ++ G E I T +E++ GS
Sbjct: 3090 GGAGADIIDGGDGTDTVDYSG-SSAAVTVDLGLATQAAGAGVEAGDQI---TNVENLDGS 3145
Query: 275 SGNDVVIGNSANNV------------------------------------FFESSGNDVF 298
+ ND + G++ N+ GND+
Sbjct: 3146 AFNDTLSGDAGANLIRGLDGGDAINGAAGNDEIEGGDGDDTIDGGADNDSLDGGLGNDIM 3205
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
DG G+DT + + ++ +I D LS
Sbjct: 3206 DGGDGVDTVYGGEGNDTLDGGAGDDTVI----GGLGDDTLSG 3243
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+G D + G + GND DG G DT +
Sbjct: 2546 AGADTLQGGEGADTLEGGEGNDTIDGGEGDDTVLAGGGADT 2586
>gi|78189851|ref|YP_380189.1| hypothetical protein Cag_1896 [Chlorobium chlorochromatii CaD3]
gi|78172050|gb|ABB29146.1| hypothetical protein Cag_1896 [Chlorobium chlorochromatii CaD3]
Length = 574
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFF 308
K++TI + + GND++ G + N+ F +GND + DG +G D F
Sbjct: 462 KSVTIVAGDGNQELRSEGGNDLLFGGNGNDRLFAGAGNDELCGGNGDNLLDGGAGSDVAF 521
Query: 309 YYAPSYLYKIY----RFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ Y++ +++ N + L ++E+LRFAD+
Sbjct: 522 FSGNVAEYRMTHNAATNMTSVVDSIPNRDGSNQLINIEQLRFADRT 567
>gi|325201887|gb|ADY97341.1| Iron-regulated protein frpC [Neisseria meningitidis M01-240149]
Length = 1102
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 83/281 (29%), Gaps = 59/281 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-----------TILSHN 123
+D + N Y+ Y F + V+ Y G T
Sbjct: 754 DGNDTLIGGAGNDYLEGGSGSDTYVFGEGFSQDTVYNYDYATGRKDIIRFTDGITADMLT 813
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCAT 182
E H L ++ S +V SYF S +
Sbjct: 814 FTREGNHLL------------------IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 855
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+++ + + G++ Y+ +Y + GDDLL+
Sbjct: 856 GKVLDVATVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN------- 906
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
G N +I +++ G GND + G + N+ GND +
Sbjct: 907 ---------------GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLN 951
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G DT A + + + I QD + +
Sbjct: 952 GEDGNDTLIGGAGNDYLEGGSGSDTYIF--GKGFGQDTVYN 990
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 886 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 945
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 946 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYIFGKGFGQDTVYNYHVDKNSDTMHFKGF 1005
Query: 390 GLS 392
+
Sbjct: 1006 KAA 1008
>gi|198418259|ref|XP_002124733.1| PREDICTED: similar to matrix metalloproteinase 1 [Ciona
intestinalis]
Length = 511
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 68/204 (33%), Gaps = 49/204 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF--EET 73
+ L+ W + + YK T +LS +E R A W L F
Sbjct: 103 YALKGGKWDHKQLTYKFINYPT-KLSVSQSE------SEIRTAFQWWEDNSSLRFSKVTK 155
Query: 74 SIHSDIKFISSNN-----------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
H+DI+ + + G+ Y + ++FD+A+ W G L
Sbjct: 156 GEHADIEIMFAVGDHGDWDSFDGPGHTLAHAYFPVFGGNVHFDEAEPWSISSASGVKLGT 215
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH+LGL H +M+ F ++ S
Sbjct: 216 VAAHEFGHSLGLSHSDVTTA-------------------LMAPFYSPNTKGLHS------ 250
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNI 206
DI AVQ++YG + +
Sbjct: 251 ---DDIQAVQELYGKSLEKT-DTV 270
>gi|85705843|ref|ZP_01036939.1| hypothetical protein ROS217_08600 [Roseovarius sp. 217]
gi|85669431|gb|EAQ24296.1| hypothetical protein ROS217_08600 [Roseovarius sp. 217]
Length = 631
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ GDD LD ++ G N + + +GG TI
Sbjct: 428 SGGNGNDVVAGGAGDDTLDGGAGDDSMSGSFGNDLMFGADGTDDLGGGAGRDTIDAGAGN 487
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ V G G+D + G ++ +D+ DG +G DT + L + +
Sbjct: 488 DRVGGGEGDDSIQGGDGHDFLAGGGRDDILDGGAGNDTINGGVGNDLMTGGSGADQFVFS 547
Query: 329 DANEHKQDFLSDVER 343
N D ++D E
Sbjct: 548 AFNPGDADVITDFED 562
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 52/308 (16%), Positives = 92/308 (29%), Gaps = 80/308 (25%)
Query: 56 RWALGEWSKVVDLTFEETSIHS---------DIKFISSNNGYVCTPRYDSRYFMEINFDK 106
R A EWS ++ F + DI+ + F+E
Sbjct: 81 RAAFAEWSIYGNIEFLQVRDPGGAAGDISTPDIRIFFAPIPGNTLGFAFFPPFLEYAIAG 140
Query: 107 A---DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
DV + A+HEIGHALGL H + N +M
Sbjct: 141 DILLDVDSSLNFDVPLFRGLAVHEIGHALGLEHIETVNA-------------------IM 181
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
P + D + DI +++IYGA + +Y + + +
Sbjct: 182 ---NPILTQPDI--------LADDIQGIRQIYGAQDSAP--VVYTLPADLESVTILH--- 225
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
N E + G N+ ++G+ ++ + G
Sbjct: 226 ----------------------NPEVLTVNGNALGNL----------IIGTGADETINGL 253
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++ +GND +G +G D + + + D L +E
Sbjct: 254 GGDDTLEGGAGNDQLNGGAGTDWANLDGVTRAAATVSMIAGG-LRVVSALGTDELIQMEW 312
Query: 344 LRFADQCI 351
+ FAD+ +
Sbjct: 313 VTFADEVV 320
>gi|13236530|ref|NP_077278.1| matrix metalloproteinase-28 isoform 1 preproprotein [Homo sapiens]
gi|37538314|sp|Q9H239|MMP28_HUMAN RecName: Full=Matrix metalloproteinase-28; Short=MMP-28; AltName:
Full=Epilysin; Flags: Precursor
gi|12698338|gb|AAK01480.1|AF219624_1 matrix metalloproteinase-28 precursor [Homo sapiens]
gi|12698852|gb|AAK01706.1|AF330002_1 matrix metalloprotease MMP25 [Homo sapiens]
gi|37183092|gb|AAQ89346.1| metalloprotease [Homo sapiens]
gi|119600534|gb|EAW80128.1| matrix metallopeptidase 28, isoform CRA_a [Homo sapiens]
Length = 520
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 59/198 (29%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPEHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGGS 290
>gi|254504135|ref|ZP_05116286.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222440206|gb|EEE46885.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 449
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 15/150 (10%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E W S G I Q T +GND + G + N+ G+DV DG +G DT
Sbjct: 228 AELWQSTFGTTNGDDILQGT--------AGNDSLFGGNGNDQLTGGLGDDVLDGGNGTDT 279
Query: 307 FFYYAPSYLYKIYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ Y ++ N + AN +DF ++ E ++F+ +D
Sbjct: 280 VVFSGTREQYAVFAGSNGRIMVADTVANRDGRDFAANFETIQFSGATLDITTALIEPSDT 339
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
++ Q+ ++ HF+ + E
Sbjct: 340 DNSA----FQIYRFYNSDTGAHFFTSSVEE 365
>gi|4505211|ref|NP_002419.1| matrix metalloproteinase-15 preproprotein [Homo sapiens]
gi|1705988|sp|P51511|MMP15_HUMAN RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
Full=Membrane-type matrix metalloproteinase 2;
Short=MT-MMP 2; Short=MTMMP2; AltName:
Full=Membrane-type-2 matrix metalloproteinase;
Short=MT2-MMP; Short=MT2MMP; AltName: Full=SMCP-2;
Flags: Precursor
gi|963056|emb|CAA88373.1| membrane-type matrix metalloproteinase 2 [Homo sapiens]
gi|33585869|gb|AAH55428.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
gi|54673588|gb|AAH36495.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
gi|116069818|gb|ABJ53423.1| matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
gi|119603371|gb|EAW82965.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
sapiens]
gi|119603372|gb|EAW82966.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
sapiens]
gi|261858710|dbj|BAI45877.1| matrix metallopeptidase 15 [synthetic construct]
Length = 669
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + ++ E R A W + L F+E
Sbjct: 132 YALTGRKWNNHHLTFSIQNYTEKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 184
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 185 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 244
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + N +M+ F
Sbjct: 245 STDLHGNNLFLVAVHELGHALGLEHSSNPNA-------------------IMAPFYQWKD 285
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 286 VDNFK------LPEDDLRGIQQLYGTPDG 308
>gi|301773282|ref|XP_002922067.1| PREDICTED: matrilysin-like [Ailuropoda melanoleuca]
Length = 267
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 63/196 (32%), Gaps = 46/196 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + + Y+ T + +L VA+ AL WS+ + L+F + +DI
Sbjct: 104 WVSSVVTYRIVSYTPDLPRVRVNQL------VAK-ALAMWSQEIPLSFRRVLAGTADIMI 156
Query: 82 ISSNNG------YVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + F + +FD+ + W G G A HE+
Sbjct: 157 SFARGAHGDYNPFDGPGNTLAHAFAPGPGLGGDAHFDEDEHWTDGSRTGVNFLITATHEL 216
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H N VM + DI
Sbjct: 217 GHSLGLGHSSDPNA-------------------VMYPAYRVGDPKNFKLA------PDDI 251
Query: 189 VAVQKIYGAPKGSLGN 204
++K+YG S N
Sbjct: 252 KGIRKLYGEKSNSTAN 267
>gi|297698857|ref|XP_002826519.1| PREDICTED: matrix metalloproteinase-15-like [Pongo abelii]
Length = 669
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + ++ E R A W + L F+E
Sbjct: 132 YALTGRKWNNHHLTFSIQNYTEKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 184
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 185 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 244
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + N +M+ F
Sbjct: 245 STDLHGNNLFLVAVHELGHALGLEHSSNPNA-------------------IMAPFYQWKD 285
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 286 VDNFK------LPEDDLRGIQQLYGTPDG 308
>gi|193783707|dbj|BAG53618.1| unnamed protein product [Homo sapiens]
Length = 510
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 59/198 (29%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPEHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGGS 290
>gi|170731339|ref|YP_001776772.1| hemolysin-type calcium binding protein [Xylella fastidiosa M12]
gi|167966132|gb|ACA13142.1| hemolysin-type calcium binding protein [Xylella fastidiosa M12]
Length = 1480
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 5/151 (3%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D +T NY+ + + I G + N TI + + + G +D +IG
Sbjct: 931 WDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDTIYGGALADILDGGHSDDTLIG 990
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-----IIVYDANEHKQDF 337
N+ ++ F +GND+ G G DT + + + + D E
Sbjct: 991 NAGDDTLFGGTGNDMLSGGKGADTLDGGSGNDTLNGGTGNDTYRFAIGVGVDRIEDSDST 1050
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + +RFAD ++ +R + Y
Sbjct: 1051 PGNTDVVRFADVASTALTALERKDNDLVIKY 1081
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Query: 195 YG-APKGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
YG + + ++ N Y E + + F + +D +T NY+ + +
Sbjct: 1245 YGTSDQLTISNYFYSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNR 1304
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N I + + + G +GND++ G + SGNDV G +G D + +
Sbjct: 1305 IYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMYRFAIG 1364
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + +I ++ D Q +
Sbjct: 1365 AGVDRIEDYDTTTGNADVLSIGQGVSIN 1392
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 7/135 (5%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D ++ N I + + I G + N I + + + G +GND++ G
Sbjct: 769 WDEAAIKARVISNGDASNNTIIGYKDGSNRIYGLDGNDEIYGGALADILDGGAGNDMLSG 828
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ SGND +G +G DT+ + + +I D+ D + +
Sbjct: 829 GGGADTLDGGSGNDTLNGGTGNDTYRFAIGVGVDRIED-------SDSTPGNTDVVRFAD 881
Query: 343 RLRFADQCIDSVNVK 357
A ++ +
Sbjct: 882 VASTALTALERKDND 896
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 13/146 (8%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D +T NY+ + + I G + N I + + + G +GND++ G
Sbjct: 1113 WDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALNDMLYGGAGNDMLSG 1172
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ SGNDV G +G D + + + + +I + + +
Sbjct: 1173 GKGADTLDGGSGNDVLYGGTGNDMYRFAIGAGVDRIEESDT-------------TAGNTD 1219
Query: 343 RLRFADQCIDSVNVKQRSILEYTASY 368
+RFAD ++ +R + Y
Sbjct: 1220 VVRFADVASTALTALERKDSDLVIKY 1245
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N G + + + + +I GNDV+IG N+ G+D+ DG +G D
Sbjct: 619 NEHYLPGTLGSDLLVGTSGNDLIRGGGNGEGNDVLIGKGGNDELSGGLGDDILDGGTGND 678
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + Y+ + D++ + + +RFAD ++ +R +
Sbjct: 679 VLYGGTGNDTYRFAIGAGVDRIEDSDS----TPGNTDVVRFADVASTALTALERKDNDLV 734
Query: 366 ASY 368
Y
Sbjct: 735 IKY 737
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 61/226 (26%), Gaps = 55/226 (24%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNT 247
+YG GN+ Y+ + + G D++ + DL
Sbjct: 680 LYG----GTGNDTYRFAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVI 735
Query: 248 E---------------SWSSI-------------------------GGYEKNMTIAQHTV 267
+ +S G N I
Sbjct: 736 KYGTGDQLTISSYFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYKDG 795
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA--- 324
+ G GND + G + ++ +GND+ G G DT + + +
Sbjct: 796 SNRIYGLDGNDEIYGGALADILDGGAGNDMLSGGGGADTLDGGSGNDTLNGGTGNDTYRF 855
Query: 325 --IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ D E + + +RFAD ++ +R + Y
Sbjct: 856 AIGVGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKY 901
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 92/300 (30%), Gaps = 54/300 (18%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G +G +YG+D + E + M Y + M+ G + +YG
Sbjct: 1135 GYNDGSNRIYGLDGNDEIYGGALNDMLYGGAGNDMLSGGKGADT---LDGGSGNDVLYG- 1190
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTE--- 248
GN++Y+ + ++ +G D++ + DL +
Sbjct: 1191 ---GTGNDMYRFAIGAGVDRIEESDTTAGNTDVVRFADVASTALTALERKDSDLVIKYGT 1247
Query: 249 --------------------SWSSI---------------GGYEKNMTIAQHTVIESVVG 273
++S G N + + G
Sbjct: 1248 SDQLTISNYFYSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYG 1307
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + G + +++ + +GND+ G G DT + + + +Y + A
Sbjct: 1308 LDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDV--LYGGTGNDMYRFAIGA 1365
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFESMKHFYEFGLS 392
D + D + + + L + DL + +IG +++ +Y
Sbjct: 1366 GVDRIEDYDTTTGNADVLSIGQGVSINQLWFQHVGNDLEVSIIGTGDQITIRDWYSNAAY 1425
>gi|119488092|ref|ZP_01621536.1| glycerophosphoryl diester phosphodiesterase [Lyngbya sp. PCC 8106]
gi|119455381|gb|EAW36520.1| glycerophosphoryl diester phosphodiesterase [Lyngbya sp. PCC 8106]
Length = 1309
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 55/168 (32%), Gaps = 24/168 (14%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ G+++ + + G+D ++ G DLN S G + N
Sbjct: 1132 TDGDDVLTGSANSETIAGLL------GNDEING-GDGDDILRGDLNNR--SPGGSFGGND 1182
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I+ + + G GND + G+ +++ + G+D+ G G DT
Sbjct: 1183 IISGGLGNDEIGGKGGNDSLFGDEGDDLIWGDDGDDILRGGLGNDTLTGD------DFSG 1236
Query: 321 FENAIIVYDANEHKQDFLSDVE---------RLRFADQCIDSVNVKQR 359
E A D + D E L FA + S N
Sbjct: 1237 GEGVDTFVLAIGEGTDTIVDFEVGMDVIGLANLTFAGLSLTSENGNTT 1284
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 44/167 (26%), Gaps = 18/167 (10%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+DV+ G++ + GND +G G D + N II
Sbjct: 1132 TDGDDVLTGSANSETIAGLLGNDEINGGDGDDILRGDLNNRSPGGSFGGNDIISGGLGND 1191
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ + L + IL + L E + F + E
Sbjct: 1192 EIGGKGGNDSLFGDEGDDLIWGDDGDDILRGGLGNDTLTGD-DFSGGEGVDTFVL-AIGE 1249
Query: 394 GRD----------------ITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
G D +TF + FG + A
Sbjct: 1250 GTDTIVDFEVGMDVIGLANLTFAGLSLTSENGNTTVAFGDETLAIIE 1296
>gi|297579199|ref|ZP_06941127.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536793|gb|EFH75626.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 1778
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 14/132 (10%)
Query: 246 NTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
NT ++S+ G + I ++ + G SGND + G N+ +GND DG
Sbjct: 1603 NTAAFSTAHIDIAHGGGGDDRIYGQGGVDLMFGGSGNDQLYGGEGNDGLRGGTGNDTLDG 1662
Query: 301 SSGLDTFFYYAPSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVERL----RFADQCI 351
+G D + + E+ + ++ + DF +++ F+D+
Sbjct: 1663 GAGNDILIGGLGNDILTGGSGEDLFKWVDGDLDNSKDRITDFTIGQDKIDLSDLFSDETR 1722
Query: 352 DSVNVKQRSILE 363
+ ++E
Sbjct: 1723 TLDQLLNSHVIE 1734
>gi|171846809|gb|AAI61475.1| mmp1 protein [Xenopus (Silurana) tropicalis]
Length = 381
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 69/222 (31%), Gaps = 54/222 (24%)
Query: 5 KP---VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP VY + + + + W + Y+ T D+ + + A
Sbjct: 3 KPRCGVYDVGQYST-VPKSSAWQKTDLTYRIINFTPDLPQADV-------EAAIQRAFKV 54
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKA 107
WS V LTF + SDI+ S + +D + + +FD+
Sbjct: 55 WSDVTPLTFTRIYNEVSDIEISFSAGDHKDNSPFDGPGGILAHAFQPGNGIGGDAHFDED 114
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ W L A HE GH+LGL H +M Y
Sbjct: 115 ESWTKTSQLYN-LFLVAAHEFGHSLGLSHSTDPGA-------------------LM-YPS 153
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNI 206
+ +A F DI A+Q +YG P G
Sbjct: 154 YSSTDPNA-FQLPQ----DDINAIQYLYGKSSNPVQPTGPTT 190
>gi|26352221|dbj|BAC39747.1| unnamed protein product [Mus musculus]
Length = 474
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 62/189 (32%), Gaps = 47/189 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEETSIH-SD 78
+W + ++ + + L+ P + A WS V LTF E +D
Sbjct: 50 GHWRKKNLTFRIFNVP--------STLSLPRVRAALHQAFKYWSSVAPLTFREVKAGWAD 101
Query: 79 IKFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHE 127
I+ C+ +D I+FDK ++W G +G L A HE
Sbjct: 102 IRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRIIAAHE 161
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GHALGL H Y + + A + D
Sbjct: 162 VGHALGLGHSR--------------------------YTQALMAPVYAGYQPFFKLHPDD 195
Query: 188 IVAVQKIYG 196
+ +Q +YG
Sbjct: 196 VAGIQALYG 204
>gi|218768419|ref|YP_002342931.1| putative RTX-family exoprotein [Neisseria meningitidis Z2491]
gi|121052427|emb|CAM08763.1| putative RTX-family exoprotein [Neisseria meningitidis Z2491]
Length = 697
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 421 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 478
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 479 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 516
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 517 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 574
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 575 GKGFGQDTVYN 585
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 481 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 540
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 541 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 600
Query: 390 GLS 392
+
Sbjct: 601 KAA 603
>gi|67923150|ref|ZP_00516639.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
gi|67854992|gb|EAM50262.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
Length = 309
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 8/209 (3%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ IY E + T+Y GG+D G + + + G E +
Sbjct: 93 DTIYGGEARDALYGRGGNDTLYGGGGNDDRQDITAGTQAFGPNFFNTTLGGLYGGEGDDL 152
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G G+D++ G +++ + + GND G +G DT + +
Sbjct: 153 LDGGAGNDEIAGGLGDDILRGGDGDDLMYGNFGNDRVFGDAGNDTMYSRLVDAVTMFGGL 212
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ II + + + + D + L A + + G DVF
Sbjct: 213 GDDIIGTGNADDLITGNAGNDIISAGDGVDIVMGDIGNDTLAGGAGNDGFLGGAGNDVFN 272
Query: 382 SMKHFYE------FGLSEGRDITFDSYLY 404
GRDI Y
Sbjct: 273 LTTEVIAGESDGISDWENGRDILLLPSAY 301
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 14/134 (10%), Positives = 35/134 (26%), Gaps = 3/134 (2%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD---T 306
W ++ ++ + + G D + G A + + GND G G D
Sbjct: 65 WMTLVNTSPGSSLYGEDGNDIIEAGGGADTIYGGEARDALYGRGGNDTLYGGGGNDDRQD 124
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
++ + + + D + + + ++
Sbjct: 125 ITAGTQAFGPNFFNTTLGGLYGGEGDDLLDGGAGNDEIAGGLGDDILRGGDGDDLMYGNF 184
Query: 367 SYEDLIQVIGQDVF 380
+ + G D
Sbjct: 185 GNDRVFGDAGNDTM 198
>gi|291383993|ref|XP_002708468.1| PREDICTED: matrix metalloproteinase 27 [Oryctolagus cuniculus]
Length = 527
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/193 (22%), Positives = 60/193 (31%), Gaps = 52/193 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + I Y+ T D+ + + AL WS V LTF S +DI
Sbjct: 106 WRKHNITYRIMNYTPDMAQADV-------DDAIQKALEVWSNVTPLTFTRISKGIADIMI 158
Query: 82 ISSNN----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
G+ P + +FD+ + W G L A
Sbjct: 159 AFRTRVHGRCPRHFDGPWGVLGHAFPPGLGLGG--DTHFDEDENWTKD-AAGFNLFLVAA 215
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H +M P +D S +
Sbjct: 216 HEFGHSLGLSHSSDQRA-------------------LM---FPNFVSLDPSKYPLSQ--- 250
Query: 186 SDIVAVQKIYGAP 198
DI A+Q IYG P
Sbjct: 251 DDINAIQSIYGGP 263
>gi|254463018|ref|ZP_05076434.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
HTCC2083]
gi|206679607|gb|EDZ44094.1| hemolysin-type calcium-binding region [Rhodobacteraceae bacterium
HTCC2083]
Length = 719
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 4/154 (2%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ + TI GDD +D G + I+ ++ G N TI ++V G
Sbjct: 206 QGNGGNDTIDAGAGDDTVDG---GTGNDTINAGVGDD-TVDGGTGNDTINAGVGDDTVDG 261
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND++ ++ +GND+ G +G DT + +++ N+
Sbjct: 262 GTGNDIINAGVGDDTVDGGTGNDIIHGGNGADTIDGGTGNDFINAGAGNDSVDGGTGNDT 321
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + D + +S
Sbjct: 322 INAGADNDTIVASTDTDTIDGGDGADTYTVLDSS 355
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 41/134 (30%), Gaps = 10/134 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G N TI ++V G +GND + ++ +GND + G DT
Sbjct: 204 SIQGNGGNDTIDAGAGDDTVDGGTGNDTINAGVGDDTVDGGTGNDTINAGVGDDTVDGG- 262
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N II + D + + + + + A + +
Sbjct: 263 ---------TGNDIINAGVGDDTVDGGTGNDIIHGGNGADTIDGGTGNDFINAGAGNDSV 313
Query: 372 IQVIGQDVFESMKH 385
G D +
Sbjct: 314 DGGTGNDTINAGAD 327
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 67/186 (36%), Gaps = 16/186 (8%)
Query: 200 GSLGNNIY--KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN+ + D I ++G GDD +D GG N I I G
Sbjct: 243 GGTGNDTINAGVGDDTVDGGTGNDIINAGVGDDTVD----GGTGNDI---------IHGG 289
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
TI T + + +GND V G + N+ + ND S+ DT + Y
Sbjct: 290 NGADTIDGGTGNDFINAGAGNDSVDGGTGNDTINAGADNDTIVASTDTDTIDGGDGADTY 349
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + V + D D + D D+V + I + + D+I +
Sbjct: 350 TVLDSSTIVDVTETVTVVVDNDGDGTVFKAIDCTTDTVTSIETFIADEALAENDIITIND 409
Query: 377 QDVFES 382
D+ ++
Sbjct: 410 TDIDDA 415
>gi|119508876|ref|ZP_01628028.1| hypothetical protein N9414_20890 [Nodularia spumigena CCY9414]
gi|119466405|gb|EAW47290.1| hypothetical protein N9414_20890 [Nodularia spumigena CCY9414]
Length = 1434
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 11/166 (6%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+++ G+D+L GG+ N + + G + N + +++ G +GND
Sbjct: 1245 DSLFGLAGNDIL----YGGLGNDYLFGSAGDDLLDGGDGNDALFGGDGNDTLRGGAGNDY 1300
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + +N+ GND+ G +G +T A + IY ++ + FL+
Sbjct: 1301 LTGGAGDNLLDGGYGNDILYGGAGNNTLLGGAGDDI--IYSGSGQNLINGGAGNDIIFLN 1358
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D + +I + S I + G F+ +
Sbjct: 1359 GGQ-----DTVAIAQGEGVDTINNFQVSLGQRIGLSGGLSFDELTL 1399
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 86/248 (34%), Gaps = 34/248 (13%)
Query: 209 IEVQQKDSPFIQTIYDSG---GDDLLDLTLIGGVKNYIDLNTESWS---------SIGGY 256
+ + + + ++D G G + + L+ G ++ + S S +GG
Sbjct: 1174 VTLTEPTASLTLQVFDDGPNEGIENITFNLVDGELYEVNPDAGSVSLTISDTPTNPVGGA 1233
Query: 257 EKNM--------TIAQHTVIESVVGSSGNDVVIGNSA---------NNVFFESSGNDVFD 299
+ N+ ++ + + G GND + G++ N+ F GND
Sbjct: 1234 DDNILVGTFENDSLFGLAGNDILYGGLGNDYLFGSAGDDLLDGGDGNDALFGGDGNDTLR 1293
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G +G D A L + I+Y + + + ++ + +N
Sbjct: 1294 GGAGNDYLTGGAGDNLLDGGYGND--ILYGGAGNNTLLGGAGDDIIYSGSGQNLINGGAG 1351
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHF-YEFGLSEGRD--ITFDSYLYLGSYDDLRNVFG 416
+ + + +D + + + +++ +F G G ++FD S D G
Sbjct: 1352 NDIIFLNGGQDTVAIAQGEGVDTINNFQVSLGQRIGLSGGLSFDELTLTQSGMDTLIKTG 1411
Query: 417 SDRGAAAR 424
+ A R
Sbjct: 1412 DETLAVLR 1419
>gi|307293860|ref|ZP_07573704.1| Phytanoyl-CoA dioxygenase [Sphingobium chlorophenolicum L-1]
gi|306880011|gb|EFN11228.1| Phytanoyl-CoA dioxygenase [Sphingobium chlorophenolicum L-1]
Length = 460
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 59/171 (34%), Gaps = 22/171 (12%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------FKALEYIAS 448
+I FD LYL D+ G D A H+ +G +E R D F Y A+
Sbjct: 38 EIMFDPQLYLLRNPDVAAA-GVD---ARLHWEQYGREEERRGDRKSWWAPHFDEEAYRAA 93
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRF------VTFDSYLYLGSYDDLRNVFGSD 502
H D + A + G +HF G + R F Y + + +
Sbjct: 94 HPDALLAIEEG--RFVSGAEHFLAIGRAQLRSGSQIAPEGFSESDYRMTRPSVGQAIDAG 151
Query: 503 R-GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ H++ G E + ++ + H + AF + ++ D
Sbjct: 152 IYVSGYDHWLQWGSHEDKIATKLRSQSNLPEHP--VAAFVPSRNVAPPSID 200
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 22/126 (17%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--------ITFNPDLYLTS 575
F Y+ + D+ A D + H+ +G EE R F+ + Y +
Sbjct: 41 FDPQLYLLRNPDVAAAGVD-------ARLHWEQYGREEERRGDRKSWWAPHFDEEAYRAA 93
Query: 576 YDDLWNVFGSDR-SAAAQHYITHGMKEGRAL------GISGMQFKSVMNLSEKSRDKADL 628
+ D R + A+H++ G + R+ G S ++ ++ D
Sbjct: 94 HPDALLAIEEGRFVSGAEHFLAIGRAQLRSGSQIAPEGFSESDYRMTRPSVGQAIDAGIY 153
Query: 629 SLSFDH 634
+DH
Sbjct: 154 VSGYDH 159
>gi|301627877|ref|XP_002943093.1| PREDICTED: matrix metalloproteinase-17, partial [Xenopus (Silurana)
tropicalis]
Length = 518
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 72/199 (36%), Gaps = 44/199 (22%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L W + ++ + + +S D++ + + AL WSK L F ET
Sbjct: 76 YALSGSVWDKKLLTWRLENSP-NTMSQDVS------RTLIGTALAVWSKETQLQFRETRE 128
Query: 76 HSDIK--FISSNNG----YVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILS 121
DI+ F++ ++G + F E + D + W Y +GT L
Sbjct: 129 QPDIRVEFVTGSHGDGYPFDGQGGTLGHAFFPGVGERAGETHMDADESWSYNTEEGTDLF 188
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A+HE GH+LGL H S N S+M + + +
Sbjct: 189 AVAVHEFGHSLGLYHSSSEN-------------------SIMKPYYQGTVGDPSRYRLPP 229
Query: 182 TPMVSDIVAVQKIYGAPKG 200
D+ +Q +YG P
Sbjct: 230 ----DDVDGIQTLYGQPDS 244
>gi|30584797|gb|AAP36651.1| Homo sapiens matrix metalloproteinase 15 (membrane-inserted)
[synthetic construct]
Length = 565
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + ++ E R A W + L F+E
Sbjct: 27 YALTGRKWNNHHLTFSIQNYTEKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 79
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 80 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 139
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + N +M+ F
Sbjct: 140 STDLHGNNLFLVAVHELGHALGLEHSSNPNA-------------------IMAPFYQWKD 180
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 181 VDNFK------LPEDDLRGIQQLYGTPDG 203
>gi|297683235|ref|XP_002819295.1| PREDICTED: matrix metalloproteinase-16-like, partial [Pongo abelii]
Length = 470
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 54/174 (31%), Gaps = 48/174 (27%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSI--------------------HSDIKFISSNNG 87
+P ++ R AL W V TFEE H D G
Sbjct: 7 DPETRKAIRRALDVWQNVTPPTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGG 66
Query: 88 YVCTPRYDSRYFM-EINFDKADVWRYGIGK--GTILSHNALHEIGHALGLMHPGSYNGGY 144
++ + + +FD + W G G L A+HE+GHALGL H
Sbjct: 67 FLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTA-- 124
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+M+ F + D+ +QKIYG P
Sbjct: 125 -----------------IMAPFYQYMETDNFK------LPNDDLQGIQKIYGPP 155
>gi|163814823|ref|ZP_02206212.1| hypothetical protein COPEUT_00974 [Coprococcus eutactus ATCC 27759]
gi|158450458|gb|EDP27453.1| hypothetical protein COPEUT_00974 [Coprococcus eutactus ATCC 27759]
Length = 1709
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GD ++D+T ++ ++ G + I + +++ GSSGND + G + +
Sbjct: 1525 GDTIIDITSYNSPARVLNGTPDNDQLGGFDDSGFVIYGYDGADTLNGSSGNDCLYGGTGD 1584
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ ++GNDV DG SG D Y I R + D + + L E +
Sbjct: 1585 DRLLGAAGNDVLDGGSGDDHLEGGDGDDTYIIQRDFGNYTIKD--DDGVNTLKFGETIVA 1642
Query: 347 AD 348
+D
Sbjct: 1643 SD 1644
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+D +++ + S I E N + +++ G +G+D + G + +++
Sbjct: 1001 VDGSMVNAFAGDDKITASKLSDIIYANEGNDIVKAGDGSDTIYGGAGDDTLYGEAGDDII 1060
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ +G+D DG +G D + A Y + I+ D + L
Sbjct: 1061 WGDAGSDKLDGGAGNDKLYGGAGDDTYVFNKGYGIDIIDDQDGRMTIQL 1109
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 5/134 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + + G GND + GNS + + SG+D+ DG +G D
Sbjct: 839 VFGEAGNDVLCGDIGNDIIYGGEGNDKLYGNSGKDHLYGGSGDDLLDGGAGDDILEDEDG 898
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ Y R + DA ++ L + I + Y + D +
Sbjct: 899 NDTYVFTRGYGKDTIIDAGGSNT-----IQFLDLTPKDILVNGTGENDATIYIKNNSDSL 953
Query: 373 QVIGQDVFESMKHF 386
+ E + +
Sbjct: 954 TIKDFCKSEDLSDY 967
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 57/151 (37%), Gaps = 14/151 (9%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ IYG + + + GDD + + + + I N +
Sbjct: 986 RHIYGTENSDDLRTVVDGSMVNAFA----------GDDKITASKLS---DIIYANEGNDI 1032
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + + TI +++ G +G+D++ G++ ++ +GND G +G DT+ +
Sbjct: 1033 -VKAGDGSDTIYGGAGDDTLYGEAGDDIIWGDAGSDKLDGGAGNDKLYGGAGDDTYVFNK 1091
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ I + + + + ++ E
Sbjct: 1092 GYGIDIIDDQDGRMTIQLGADLDIQDITVFE 1122
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 20/211 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQT------IYDSGGDDLLDLT-----LIGGVKNYIDLNTESWS 251
G+ Y + S + T I G D + + + G L+ S
Sbjct: 1170 GDEQYTVATATDASDAVFTERACGIIASGAGYDYIVASEDSDIIFGDSDTDRILSGGSDD 1229
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G E + + + + G +GND + G + +++ SGND DG G D +++
Sbjct: 1230 ITYGGEGSDQLYGEDGNDFISGGTGNDYMNGGTGDDLLISGSGNDFMDGGEGDDIYYFNM 1289
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER------LRFA---DQCIDSVNVKQRSIL 362
I + + + D + + FA D + +
Sbjct: 1290 GDGNDTITDAAGENTIIFCDGIESDKIKAYRSDWNDLLITFAGTDDTLVLKKYCVDKDAR 1349
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
Y + D D +++ Y+ +E
Sbjct: 1350 GYRLVFADGYTGCATDKDSVLRNIYDTSKTE 1380
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G GN+ + GN+ ++ GND G SG DT+ Y + I +
Sbjct: 1408 DTLIGGDGNNRITGNAGDDCIDGGKGNDYLSGGSGSDTYIYKKGYGIDTINDDSGHNYIE 1467
Query: 329 DANEHKQDF 337
++ + +D
Sbjct: 1468 ISDYNIEDI 1476
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y+ +TI + +VGS +D +IG NN ++G+D DG G D + S
Sbjct: 1386 YDDGVTIISSGGDDQLVGSDCSDTLIGGDGNNRITGNAGDDCIDGGKGNDYLSGGSGSDT 1445
Query: 316 YKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYED 370
Y + + D + H +SD +E + +++ + + + + D
Sbjct: 1446 YIYKKGYGIDTINDDSGHNYIEISDYNIEDIHSYRTNWNNLTMVMGDGDDTSLNNSD 1502
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 69/201 (34%), Gaps = 28/201 (13%)
Query: 205 NIYKIEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
NIY + TI SGGDD L + + G + N
Sbjct: 1372 NIYDTSKTEYMPTIYDDGVTIISSGGDDQLVGSDCSDT-------------LIGGDGNNR 1418
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTF----FYYAPSYL 315
I + + + G GND + G S ++ + + G D + SG + + +
Sbjct: 1419 ITGNAGDDCIDGGKGNDYLSGGSGSDTYIYKKGYGIDTINDDSGHNYIEISDYNIEDIHS 1478
Query: 316 YKIYRFENAIIVYDA-----NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y+ +++ D N D L +E +++ + + +I++ T+
Sbjct: 1479 YRTNWNNLTMVMGDGDDTSLNNSDSDKLI-IEGFFSSEKNREFSLIFGDTIIDITSYNSP 1537
Query: 371 LIQVIGQDVFESMKHFYEFGL 391
+ G + + F + G
Sbjct: 1538 ARVLNGTPDNDQLGGFDDSGF 1558
>gi|30348964|ref|NP_766385.1| matrix metalloproteinase-28 isoform 2 [Mus musculus]
gi|26341830|dbj|BAC34577.1| unnamed protein product [Mus musculus]
gi|27461084|gb|AAL57762.1| matrix metalloproteinase-28 variant B precursor [Mus musculus]
gi|56207070|emb|CAI24739.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
gi|223459846|gb|AAI37922.1| Matrix metallopeptidase 28 (epilysin) [Mus musculus]
Length = 496
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 56/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGRS 290
>gi|304394439|ref|ZP_07376362.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
gi|303293879|gb|EFL88256.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
Length = 5627
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 29/194 (14%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ I ++ I G+D + D T+ G N + + G
Sbjct: 5259 DTIDGLDGDDNLVGGSGNDIINGGQGNDRILGGDGDDTITAGDGNDV---------VYGE 5309
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTF 307
+ N TI + + G +G+D ++G + +GND +G G D
Sbjct: 5310 DNNDTITGGLGADVLHGGNGDDTIMGGDGADHLDGFAGNDTLTGGAGYDIIEGGGGNDIA 5369
Query: 308 FYYAPSYLYKIYRFENAIIVYDAN----EHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
Y Y + + N D + +VE RFAD ++ S +
Sbjct: 5370 IYSGNQADYTVMDNGDGSHTISDNRAGSPDGVDIVRNVEIFRFADGDFGPNSIDVPSPIA 5429
Query: 364 YTASYEDLIQVIGQ 377
+ I+V G+
Sbjct: 5430 FDFDRSGAIEVTGE 5443
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 16/176 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + + S F ++ +L + D ++ ++
Sbjct: 3195 GGYLSDAAGDTFTDIENVVGSRFDDVVFGGAAAGTFELLD---GDDRFDNDSAVSVTVLA 3251
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---------ESSGNDVFDGSSGLDT 306
N + + ++ G +GND V G + +++ + GND DG +G DT
Sbjct: 3252 GGGNDIVYGGAGVSTIEGGAGNDFVYGEAGDDILNLGTGDDVTSGNEGNDTIDGGAGSDT 3311
Query: 307 FFYYAPSYLYKIYRF-ENAIIVYD---ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
Y Y I +N+I + D + D L +VE FAD I +
Sbjct: 3312 AIYLGNRADYTITNNPDNSITIVDNRPGSPDGTDILRNVEFGEFADGTIAFGSNSS 3367
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 15/227 (6%)
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQK 214
+ +S + + + + + + ++ DI G + ++
Sbjct: 5154 YTSSTNTLVITKTGGGNFTDAEAQS-LLDDIRYRHDNVGTTMSDNDRSFSITFEDADGNV 5212
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVG 273
P I TI D + + G N + LN + I G N TI +++VG
Sbjct: 5213 SLPSISTISLVDNDRATNNMINGSSGNDVALNGTAADDLIQGLGGNDTIDGLDGDDNLVG 5272
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SGND++ G N+ G+D G D + + I A +++ N
Sbjct: 5273 GSGNDIINGGQGNDRILGGDGDDTITAGDGNDVVYGEDNND--TITGGLGADVLHGGN-- 5328
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + D L A Y+ + G D+
Sbjct: 5329 GDDTIMG------GDGADHLDGFAGNDTLTGGAGYDIIEGGGGNDIA 5369
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 58/190 (30%), Gaps = 34/190 (17%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------Y 316
A T I++V G +G+D + ++ + S+GND DG +G D +
Sbjct: 4718 AFSTAIDTVTGGAGDDRIFTGGGDDFLYGSTGNDTLDGGAGSDELYGMENRDTLNGGQGD 4777
Query: 317 KIYRFENAIIVYDANEH--------KQDFL------------SDVERLRFADQCIDSVNV 356
A D + D L S + L D
Sbjct: 4778 DFLYGGAAADTLDGGQGSDTLYGESGIDTLMGGANDDFLNGGSGNDILNGGDGSDILYGG 4837
Query: 357 KQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+L +DL G D ++ F + G D+ Y S + +
Sbjct: 4838 SNNDVLSGGNGNDDLFGESGNDRLRGDAGNDFMDGGFGT------DTADYSASGAGVVAI 4891
Query: 415 FGSDRGAAAR 424
F + GA +
Sbjct: 4892 FSNTDGAGIQ 4901
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
D G ++ + + D+ + + G + ++ +++ G + +D +
Sbjct: 4544 DGSGSAVISVMVRTQTTAGDDVLSGGLGDDALFGGGGSDSLFGEQDNDNLFGGADDDDLF 4603
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G + +++ +GND+ DG +G D+F + + + V
Sbjct: 4604 GGAGDDLLNGGTGNDILDGGAGADSFDGASGTDRVTYQTSATGVDVL 4650
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 67/247 (27%), Gaps = 32/247 (12%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
D +G + ++YG N + + T+ G
Sbjct: 4737 TGGGDDFLYGSTGNDTLDGGAGSDELYGMENRDTLNGGQGDDFLYGGAA-ADTLDGGQGS 4795
Query: 229 DLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D L ++ ID + + G N + + + G S NDV+ G + N
Sbjct: 4796 DTL------YGESGIDTLMGGANDDFLNGGSGNDILNGGDGSDILYGGSNNDVLSGGNGN 4849
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----------- 335
+ F SGND G +G D + ++ +N
Sbjct: 4850 DDLFGESGNDRLRGDAGNDFMDGGFGTDTADYSASGAGVVAIFSNTDGAGIQGNFTNTAS 4909
Query: 336 ---------DFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D + +E F DQ + ++ YE+ E+
Sbjct: 4910 GGYQGDALGDSYTSIEVFEGTSFDDQVWGRADSFTANLGAGDDIYENGATGSDNVSGEAG 4969
Query: 384 KHFYEFG 390
G
Sbjct: 4970 NDIIVTG 4976
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 74/223 (33%), Gaps = 27/223 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQ-KDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSI 253
G ++ + D+ +T SG L ++G N I ++++
Sbjct: 3040 GVDVLFSDSDTGGLNGAYVSDTAGGKTGIASGDTFTLVEAVVGSDHNDRIYGQDGNFTAD 3099
Query: 254 GGYEKNM--TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G ++ T I++V G +GND + + +++ G+D G +G D A
Sbjct: 3100 LGGGNDLYDVTKADTGIDTVDGGAGNDTIFTGAGDDILSGGDGDDELSGEAGADVIDGGA 3159
Query: 312 PSY--LYKIYRFENAIIVYDANEHKQ------------------DFLSDVERL---RFAD 348
S Y+ A+++ D + + D +D+E + RF D
Sbjct: 3160 GSDTVSYRYASSGVAVLLDDTDANGVAGVFTNTTAGGYLSDAAGDTFTDIENVVGSRFDD 3219
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+L+ +++ V + G
Sbjct: 3220 VVFGGAAAGTFELLDGDDRFDNDSAVSVTVLAGGGNDIVYGGA 3262
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +S+ G ND + G + ++ F +G+D+ +G +G D A
Sbjct: 4566 LSGGLGDDALFGGGGSDSLFGEQDNDNLFGGADDDDLFGGAGDDLLNGGTGNDILDGGAG 4625
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ + + Y + D L
Sbjct: 4626 ADSFD-GASGTDRVTYQTSATGVDVL 4650
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 2/129 (1%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
NIY +V + + T + G + +L++IG + +I G N I
Sbjct: 2923 NIYVSDVAESLTFTTATTFQDDG--VAELSIIGSNDADTFIGNYGDDNIDGRFGNDVIYG 2980
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +++ G G+D + G + +++ + ND+ +G +G D +
Sbjct: 2981 RSGSDTLTGELGDDQLFGGNGDDILRGEAENDLLEGGAGADVHDGGSGFDTVSYADASVG 3040
Query: 325 IIVYDANEH 333
+ V ++
Sbjct: 3041 VDVLFSDSD 3049
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + N + + + G +G+D++ G + N++ +G D FDG+SG D Y
Sbjct: 4583 SLFGEQDNDNLFGGADDDDLFGGAGDDLLNGGTGNDILDGGAGADSFDGASGTDRVTYQT 4642
Query: 312 PSYLYKIYRFENAII 326
+ +
Sbjct: 4643 SATGVDVLLESTGPT 4657
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 27/72 (37%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A T E G +D + G+SA+N F G D G +G DT S + + +
Sbjct: 4026 AFATQSEFTYGQGSDDTITGDSADNSIFGQDGGDTIVGGAGNDTLVGDRISRIDAVGTQQ 4085
Query: 323 NAIIVYDANEHK 334
++
Sbjct: 4086 TINQTTAGDQGG 4097
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 57/169 (33%), Gaps = 6/169 (3%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + Y+ + I+ + DD + +L G
Sbjct: 4903 NFTNTASGGYQGDALGDSYTSIEVFEGTSFDDQVWGRADSFTA---NLGAGDDIYENGAT 4959
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++ + +V D++ G + ++ G+D DG + DT Y Y
Sbjct: 4960 GSDNVSGEAGNDIIVTGGDADLINGGAGDDRLQGGGGDDNIDGDADTDTAVYSGNRADYS 5019
Query: 318 IYRFENAIIVYD---ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
I A+ V D + D L +VE + FA+ ID N L+
Sbjct: 5020 INDLGFALQVVDNRPGSPDGTDVLFNVEFIEFANGTIDPFNEADTPQLD 5068
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 14/151 (9%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-KNMTIAQHTVIESVVGSSGNDVV----- 280
GD+ +D+ + SW S + A +V+ + +SGND++
Sbjct: 3867 GDNTIDMPPLTATATMNGDVFVSWQSDNTLDVDGDGTAVVSVLVTTRTTSGNDILSGGDG 3926
Query: 281 ----IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII----VYDANE 332
G ++ + +D G G DT + Y I + +
Sbjct: 3927 NDIIDGGDGDDTLTGGADDDTLIGGLGSDTAVFSGNQADYTITDLGGGQVEVRDDRVGSP 3986
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D L+ ++ L FAD I + + L
Sbjct: 3987 DGTDTLTGIDFLDFADGPIPTPVTPPQPPLF 4017
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 40/169 (23%), Gaps = 33/169 (19%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYI---DLNTESWS 251
G+++ + TI G D D T+ N I D S
Sbjct: 3289 TGDDV------TSGNEGNDTIDGGAGSDTAIYLGNRADYTITNNPDNSITIVDNRPGSPD 3342
Query: 252 SIG-------GYEKNMTIAQHTVIESVVGSSGND----------VVIGNSANNVFFESSG 294
G + TIA + ++G+ D + G + G
Sbjct: 3343 GTDILRNVEFGEFADGTIAFGSNSSLIIGTPSADAGLTGSGSAQYIYGQGEADAISGGGG 3402
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
ND G G DT R ++
Sbjct: 3403 NDALHGQDGSDTISGGDGDDTILGDRVTQVTDSVGGQSVINTTSIGIQS 3451
>gi|73968283|ref|XP_848410.1| PREDICTED: similar to Matrix metalloproteinase-19 precursor
(MMP-19) (Matrix metalloproteinase RASI) (MMP-18) [Canis
familiaris]
Length = 547
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 57/188 (30%), Gaps = 45/188 (23%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W + ++ L + A+ A WS LTF E +DI
Sbjct: 103 GRWRKKHLTFRIFNLPSTLPP-------DTARAALLQAFQYWSSAAPLTFREVQAGWADI 155
Query: 80 KFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ C+ +D ++FD+ ++W +G L A HE+
Sbjct: 156 RLSFHGRQSPYCSNSFDGPGRVLAHADIPELGSVHFDEDELWTERTYRGVNLRIIAAHEL 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H Y + + A + D+
Sbjct: 216 GHALGLGHSR--------------------------YTQALMAPVYAGYRPHFKLHPDDV 249
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 250 AGIQALYG 257
>gi|255958312|ref|NP_001157669.1| matrix metalloproteinase-19 isoform 2 [Mus musculus]
gi|74202055|dbj|BAE23019.1| unnamed protein product [Mus musculus]
Length = 455
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 62/189 (32%), Gaps = 47/189 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEETSIH-SD 78
+W + ++ + + L+ P + A WS V LTF E +D
Sbjct: 31 GHWRKKNLTFRIFNVP--------STLSLPRVRAALHQAFKYWSSVAPLTFREVKAGWAD 82
Query: 79 IKFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHE 127
I+ C+ +D I+FDK ++W G +G L A HE
Sbjct: 83 IRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRIIAAHE 142
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GHALGL H Y + + A + D
Sbjct: 143 VGHALGLGHSR--------------------------YTQALMAPVYAGYQPFFKLHPDD 176
Query: 188 IVAVQKIYG 196
+ +Q +YG
Sbjct: 177 VAGIQALYG 185
>gi|149513075|ref|XP_001515193.1| PREDICTED: similar to leukolysin, partial [Ornithorhynchus
anatinus]
Length = 574
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 72/202 (35%), Gaps = 50/202 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLT-THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET- 73
+ L W+ + ++ LS D + + ++AL W V L F E
Sbjct: 78 YALSGSMWNRRLLTWRVRSFPRASALSMDTI------RTLMQYALAAWGTVGGLEFREVV 131
Query: 74 ---SIHSDIKFISS----NNGYVCTPRYDS---RYFM-------EINFDKADVWRYG--I 114
+ +DI S +GY + +F + +FD+ + W +G
Sbjct: 132 TGSAAEADILIDFSRAYHEDGYPFDGPGGTLAHAFFPGEHPISGDTHFDEEEAWTFGEDD 191
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G GT L A+HE GHALGL H + N S+M F +
Sbjct: 192 GGGTDLFAVAVHEFGHALGLAHSSAPN-------------------SIMRPFYQGPAGNP 232
Query: 175 ASFGYCATPMVSDIVAVQKIYG 196
+ + D +Q++YG
Sbjct: 233 SQYHLPP----DDQEGLQQLYG 250
>gi|149914007|ref|ZP_01902539.1| RTX toxins and related Ca2+-binding protein [Roseobacter sp.
AzwK-3b]
gi|149812291|gb|EDM72122.1| RTX toxins and related Ca2+-binding protein [Roseobacter sp.
AzwK-3b]
Length = 1274
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 68/215 (31%), Gaps = 26/215 (12%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI---YKIEVQQKDSPFIQTIYDS 225
+ T + +I AV Y G ++ Y + TI+ +
Sbjct: 94 PTTGTTPVLTLTDTQDLFEIDAVYGNYIVDGAETGESMPLGYSDAQGDLITDNADTIFGN 153
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGDD +D + G N +A T +++ G GND + GN+
Sbjct: 154 GGDDTIDA-------------AGGDDFVSGGTGNDVVAGGTGNDNLNGDDGNDSLSGNAG 200
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ F SG D G G D + F +A E DFLS
Sbjct: 201 NDQLFGGSGFDALSGGDGNDLLAGGGDNDTL----FGDAGNDDLRGESGDDFLSGGIGDD 256
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F + + NV +DL G D
Sbjct: 257 FLEGGTGNDNVNGDD------GNDDLRGDAGDDQM 285
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 64/199 (32%), Gaps = 8/199 (4%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + G + I + ++ G D +G + D TE +I
Sbjct: 549 ATYTNTGGDPVTIAFSEIETVLTDADGTVDGTSSADTINVGFIDAQGDRVTEGADTIVTV 608
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N ++A +SV +G+D V G + N+ GND G G D A +
Sbjct: 609 DGNDSVAAGGGDDSVDAGTGDDFVEGGAGNDTLIGGDGNDALRGDDGNDVLSGDAGNDDL 668
Query: 317 -----KIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
F A + + D L + + D L A
Sbjct: 669 LGGAGDDQMFGGAGDDFMGGQDGNDTLDGGDGADFVAGDDGNDLVQGGAGSDTLVGGAGA 728
Query: 369 EDLIQVIGQDVFESMKHFY 387
+ L+ +G D F + +F
Sbjct: 729 DTLVGGLGNDFFTADNNFV 747
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 15/187 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I T++ G+D L GG N + L + G + + I+ T + G
Sbjct: 368 GGAGIDTLFGGDGNDQLS----GGFDNDVLLGDAGNDDLRGEDGDDFISGGTGDDFAEGG 423
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND + G+ N+ +GND G G DT + +
Sbjct: 424 AGNDTINGDEGNDDLRGGAGNDQIFGGDGNDTLAGGEGADS---LVGGAGADSFALGADD 480
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D + + D + + + E + D + + G + +
Sbjct: 481 TASGGDGDDIFLVDPSLPTGGNATITGGETGETAGDTLDLRGLGPVDVV--------YNS 532
Query: 395 RDITFDS 401
D TF+
Sbjct: 533 SDPTFNP 539
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 15/191 (7%)
Query: 215 DSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIE 269
I T++ G+DLL D ++ G DL E + G + + T +
Sbjct: 287 GGAGIDTLFGGDGNDLLAGGFDNDVLFGDAGNDDLRGEDGDDFLSGGIGDDFLDGGTGND 346
Query: 270 SVVGSSGNDVVIGNSANN---------VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+V G GND + G++ ++ F GND G D A + +
Sbjct: 347 NVNGDDGNDDLRGDAGDDQLFGGAGIDTLFGGDGNDQLSGGFDNDVLLGDAGNDDLRGED 406
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ I ++ + + + + + D + + L G D
Sbjct: 407 GDDFISGGTGDDFAEGGAGN-DTINGDEGNDDLRGGAGNDQIFGGDGNDTLAGGEGADSL 465
Query: 381 ESMKHFYEFGL 391
F L
Sbjct: 466 VGGAGADSFAL 476
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D T+ GG N DL + + G + + T + V G GND + G+ N++
Sbjct: 882 DDTVTGGTGND-DLRGGDGNDSLEGGLGDDFLDGDTGDDLVFGGDGNDDMRGSEGNDLLQ 940
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+GND G DT A + L + +++IV + D + + DQ
Sbjct: 941 GGAGNDTLLGEMDNDTLDGGAGADLLEGDIGNDSLIVSANDTASGG---DGDDIFTIDQS 997
Query: 351 IDSVNVK 357
I
Sbjct: 998 ITDGPGT 1004
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 5/127 (3%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI +GGDD + V + N + + T+ T + + G GN
Sbjct: 845 GADTILGNGGDDDIRAGGGNDVVDGGAGNDF----VDAGAGDDTVTGGTGNDDLRGGDGN 900
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G ++ +G+D+ G G D + L + N ++ + + D
Sbjct: 901 DSLEGGLGDDFLDGDTGDDLVFGGDGNDDMRGSEGNDLLQ-GGAGNDTLLGEMDNDTLDG 959
Query: 338 LSDVERL 344
+ + L
Sbjct: 960 GAGADLL 966
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 53/188 (28%), Gaps = 20/188 (10%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
P G + + D+ G + +G D TE +I G
Sbjct: 793 PGAVRGVVTFSTGETLTFEGIELILTDAVDGTEAGQFMPVGFADAEGDAITEGADTILGN 852
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I + V G +GND V + ++ +GND G G D+
Sbjct: 853 GGDDDIRAGGGNDVVDGGAGNDFVDAGAGDDTVTGGTGNDDLRGGDGNDSLEGGLGDDFL 912
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ D + D D + +L+ A + L+ +
Sbjct: 913 D-------------GDTGDDLVFG------GDGNDDMRGSEGNDLLQGGAGNDTLLGEMD 953
Query: 377 QDVFESMK 384
D +
Sbjct: 954 NDTLDGGA 961
>gi|89068815|ref|ZP_01156198.1| calcium binding hemolysin protein, putative [Oceanicola granulosus
HTCC2516]
gi|89045585|gb|EAR51648.1| calcium binding hemolysin protein, putative [Oceanicola granulosus
HTCC2516]
Length = 10858
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 60/222 (27%), Gaps = 44/222 (19%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G++I D I+ G D + T NT + +
Sbjct: 7833 EAGAGDDIIDAGDGADD------IFGGDGFDTVRFTGS---------NTGVRADLATVIG 7877
Query: 259 NMTIAQHTVIESV---------------------VGSSGNDVVIGNSANNVFFESSGNDV 297
AQ ESV G G+D + G + ++ +G+D
Sbjct: 7878 QGGYAQGDFYESVEALEGSAFSDTLGGDAGDNWLSGVDGHDELTGRAGDDTLLGGAGDDT 7937
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVY------DANEHKQDFLSDVERLRFADQCI 351
DG +G D F A + +++ + D L +E L D
Sbjct: 7938 LDGGAGGDALFGGAGDDTARYETSAAGVVISLLDGTATGGDAAGDVLVGIENLVGTDHAD 7997
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHFYEFGL 391
+ L + L G D+ G
Sbjct: 7998 SLTGDDGGNALFGGRGDDALTGGDGDDLLAGGRGADILSGGA 8039
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 59/171 (34%), Gaps = 10/171 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ G D D TL G + IDL + S ++ IE + GS
Sbjct: 8028 GGRGADILSGGAGTDTADYTLSLGGIS-IDLAAGTASGGDAEGDTLS-----GIEIIQGS 8081
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+D + G++A+N F S G D G G+DT Y + A E
Sbjct: 8082 FHDDSLTGDAADNTFRGSRGADTMAGGDGIDTADYAFADEAVAVNLATGQGT---AGEAA 8138
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D LS +ERL + I + +DL++ G H
Sbjct: 8139 GDVLSGIERLVGSFHADTFDGSAGDDIFDGRFG-DDLLRGAGGSDDYVFGH 8188
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 18/198 (9%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDL--LDLTLIGGVKNYIDLNTES---- 249
G G++ + ++ GDD + + G V + +D
Sbjct: 7921 TGRAGDDTLLGGAGDDTLDGGAGGDALFGGAGDDTARYETSAAGVVISLLDGTATGGDAA 7980
Query: 250 ------WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G + ++ ++ G G+D + G +++ G D+ G +G
Sbjct: 7981 GDVLVGIENLVGTDHADSLTGDDGGNALFGGRGDDALTGGDGDDLLAGGRGADILSGGAG 8040
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT Y I DA D LS +E ++ + +
Sbjct: 8041 TDTADYTLSLGGISIDLAAGTASGGDAEG---DTLSGIEIIQGSFHDDSLTGDAADNTFR 8097
Query: 364 YTASYEDLIQVIGQDVFE 381
+ + + G D +
Sbjct: 8098 GSRGADTMAGGDGIDTAD 8115
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 9/141 (6%)
Query: 229 DLLDLTLIGGVK--NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D +D + V+ ID + I G + +I + + G G+D + G ++
Sbjct: 10677 DRIDFSGFDTVREVAVIDGWFGND-DIIGSRQGDSIEGGFGRDELRGEGGDDRIDGGWSD 10735
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ F +G+DV G SG D + A + N + + + D + D + R
Sbjct: 10736 DELFGGAGDDVLIGGSGNDELWGGADDDTFVF----NRLYDIGRSARRTDEIGDFD--RA 10789
Query: 347 ADQCIDSVNVKQRSILEYTAS 367
D +D + I E+ S
Sbjct: 10790 GDDVLDLRGLGLSYIDEFVFS 10810
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 1/107 (0%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
+ LDL+ V+N + + I G +++ I + + G G+D + G ++
Sbjct: 10531 SNKLDLSGFESVENVARIQGWFGNDRITGSQQDDVIDGGFGKDRIAGEGGDDRLFGGWSD 10590
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ +G+D DG G D A + I E A D
Sbjct: 10591 DRLEGGAGDDTLDGGRGRDRLEGGAGDDTFLIRGTEAARERIDGGSG 10637
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IG 254
P+ + G+N+Y+IEV +D D L+ +T + I L + +G
Sbjct: 10361 VPQDADGDNVYEIEVAAEDGR-----DDDRATILVTVTDVVEDGGPITLTGGAGRDTLVG 10415
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N+ ++++G+ G+D + G ++ F +G+D+ DG SG D A
Sbjct: 10416 GDEPNLLEGLGGR-DALIGNGGDDSLFGGRGDDDLFGGAGDDLLDGGSGGDDLEGGAGDD 10474
Query: 315 LYKIYRFEN 323
+ I FE
Sbjct: 10475 TFLIRGFEA 10483
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D + G + + GND G G DT S +Y I+ D
Sbjct: 4306 GGPGDDTINGLATASRMLGEGGNDTLTGGGGNDTLSGQGGSDVYSFAAGFGRDILDDGGA 4365
Query: 333 HKQDFLSDVERLRFA 347
+ D + + +RF
Sbjct: 4366 NTGDGSGNHDIVRFD 4380
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G G+D + G + ++ GND+ +G +GLD+ A +Y+ + I+
Sbjct: 5740 DSLDGQGGDDTLFGGAGSDELVGGDGNDLLEGGAGLDSLEGGAGDDIYRFDAGDGQDIID 5799
Query: 329 DAN 331
DA+
Sbjct: 5800 DAS 5802
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G+D + G+ +N GND G G DT A R +A I +
Sbjct: 5105 GGAGDDTITGSDGDNRLAGHGGNDSLVGLRGRDTLVGGAGDDTLDGGR--DADIYEFSAG 5162
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
QD +++ +D+ + + ++
Sbjct: 5163 FGQDLITNTGWTSASDEVVFDATIDPADLI 5192
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 60/164 (36%), Gaps = 23/164 (14%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ ++ + + TI DS G++ D L+ + LN ++ G ++ +
Sbjct: 1998 DTIRLTRDGASTDVLITILDSAGNETGDSVLLVNQFGGLRLNLGGFAEAIGTDEGLDFVA 2057
Query: 265 HTVIESVV---GS-----------------SGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
IE +V G G+D + G +N +G+D G SG
Sbjct: 2058 PNQIEKIVFERGGMLSFSELVDRVLENARTDGDDAIYGVLNDNTLDGGAGDDYLTGQSGF 2117
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
DT+ + I + A ++ K D L + +R+ D
Sbjct: 2118 DTYIFGRGYGRDVIEDKDFASALFGP---KDDLLQFTDDIRWTD 2158
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 10/106 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------ 322
E++ G GND + S ++V GND G G DT+ + + I
Sbjct: 3689 ETLDGGGGNDSLFAGSGDDVITGGPGNDWLRGGFGNDTYSFASGFGQDTISDDGRTNNSP 3748
Query: 323 NAIIVYDANEHKQDFLSDVE----RLRFADQCIDSVNVKQRSILEY 364
+++ A D + L FA V + Y
Sbjct: 3749 TDAVIFGAGLSAADLRVRTDGSDLVLTFAGTEDRLVVENTFNSGNY 3794
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 34/77 (44%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + ++ G + ++ +++ G +G+D ++G N++ +G D +G +G D
Sbjct: 5727 TGAGETLAGLGGDDSLDGQGGDDTLFGGAGSDELVGGDGNDLLEGGAGLDSLEGGAGDDI 5786
Query: 307 FFYYAPSYLYKIYRFEN 323
+ + A I
Sbjct: 5787 YRFDAGDGQDIIDDASG 5803
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 49/184 (26%), Gaps = 47/184 (25%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y I D+GGDD + G + + +
Sbjct: 6299 GGTGNDTYVFGADDGTDR----ITDAGGDDRISFA-AGVAPEDVSVRQAGHDLVLRVVGG 6353
Query: 260 MT-------IAQHTVIESVV-----------------------------------GSSGN 277
T +A T IE+V G+ GN
Sbjct: 6354 TTRIVLVDALAGGTSIETVAFDDGTAWTWDDLLDASMLGTDGDDSLALVDGLTLDGAGGN 6413
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G G+DV G G D + + +I A ++ D
Sbjct: 6414 DSLTGGDGGETLVGGPGDDVLKGGLGDDVYRFALGDGQDRIEDVAGANVLLFGPGILPDD 6473
Query: 338 LSDV 341
+ V
Sbjct: 6474 VRVV 6477
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------YRFENAIIVY 328
G+D ++ ++ +++ +G+D+ D G D F + R + A ++
Sbjct: 7818 GGDDTILTDAGDDLIEAGAGDDIIDAGDGADDIFGGDGFDTVRFTGSNTGVRADLATVIG 7877
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ DF VE L + + L +++L G D
Sbjct: 7878 QGGYAQGDFYESVEALEGSAFSDTLGGDAGDNWLSGVDGHDELTGRAGDD 7927
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 1/121 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ E + G G+DV+ G S N+ F +G+D G G D
Sbjct: 4934 LTGTASDDTLTGTDAWERLSGGDGDDVLSGGSGNDSLFGGNGDDSLTGGGGDDALSDDGG 4993
Query: 313 SYLYKIYR-FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y F I + + + + D + L + + L
Sbjct: 4994 GATYLFSAGFGQDTITHRLDPAAPGVIVFDATVSPGDISVSGGGEFDDITLHFANGADRL 5053
Query: 372 I 372
Sbjct: 5054 T 5054
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E++ G +G+D ++G ++ +G D+ +G G DT+ + +I A V
Sbjct: 6543 ETLAGGAGDDRLVGLGGDDDLAGGAGVDLLEGGEGDDTYRFGPGDGQDRIADAGGAADVL 6602
Query: 329 DANEHK 334
Sbjct: 6603 ALGAGI 6608
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 9/121 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYD 329
S G+D V G ++ G+D+ G G D + Y +I A +V
Sbjct: 6792 AQASDGDDEVYGTDGDDTLAGGPGDDLLAGGDGDDLYLYARGDGDDRIDALGRGASVVRL 6851
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
A+ D V +D + ++ L+ +G +F
Sbjct: 6852 ADHDVADLRGAVRAGPGSDDLAVTFATTGDRLV--------LVDALGAANGARGSLTLQF 6903
Query: 390 G 390
Sbjct: 6904 A 6904
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 9/126 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+V S G+D ++G + +++ +GNDV G +G DT A + + +
Sbjct: 5251 ETVETSLGDDTILGTADSDLLDGLAGNDVLQGGAGRDTLIGGAGNDDLAGGTGRDILTDA 5310
Query: 329 DANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D + DV R D + +L + V G+D + +
Sbjct: 5311 DGD--------DVYRYALGDGIDRITDLAGFDRLLFGAGIVPSDVTVSGRDGADLVLRLA 5362
Query: 388 EFGLSE 393
+ G E
Sbjct: 5363 DGGRIE 5368
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 19/164 (11%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D +D + +N + G + + IE +VGS D G++ +
Sbjct: 8107 GGDGIDTADYAFADEAVAVNLATGQGTAGEAAGDVL---SGIERLVGSFHADTFDGSAGD 8163
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-------------DANEH 333
++F G+D+ G+ G D + + S I A +
Sbjct: 8164 DIFDGRFGDDLLRGAGGSDDYVFGHDSGADTITEIGAADDLDRLVLTAGLLPKDVSVLRA 8223
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
D L ++ER D + L E ++ G
Sbjct: 8224 GDDLLVEIER---DDGFLIDTVTVTDHFLGTGTGIEQIVFADGT 8264
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGS------SGNDVVIGNSANNVFFESSGNDVF 298
L + ++ G + + A I++ G G+D G + ++ +G+D
Sbjct: 5553 LRALAAANGGDAQSIESDATGETIDAGAGDDTLTDLGGDDSFSGGTGDDSIEGGAGDDTL 5612
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G G DT + +Y + + D
Sbjct: 5613 AGGPGDDTLSDASGDDVYHFAAGDGQDRIED 5643
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 2/103 (1%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T++ L G ++ T G + +T +S G +G+D +
Sbjct: 5546 TVWTPATLRALAAANGGDAQSIESDATGETIDAGAGDDTLTDLGGD--DSFSGGTGDDSI 5603
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G + ++ G+D +SG D + + A +I
Sbjct: 5604 EGGAGDDTLAGGPGDDTLSDASGDDVYHFAAGDGQDRIEDLAG 5646
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 55/160 (34%), Gaps = 5/160 (3%)
Query: 244 DLNTESWS--SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
DL + + S+ G + T+ + + + G +G+D + G + + +GND G
Sbjct: 4112 DLLPGTQAGDSLAGLAGDDTLTGNNGDDDLDGGAGDDTLTGGAGADTLTGGAGNDSLTGD 4171
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE-RLRFADQCIDSVNVKQRS 360
G DT A R ++ + A D L + + ++ + +
Sbjct: 4172 DGADTLTGGAGDDSLTGGRHDDTYLF--APGFGHDSLLEHDGSSSWSGNDTVVFDGILST 4229
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ +DL+ + G + ++F
Sbjct: 4230 EVTVYIDGDDLVLATDAGDELRLVDTVAGGAARVETVSFA 4269
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 9/114 (7%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ N + + T T+ G G+D + G A + G+D +G G
Sbjct: 3523 NFNGAPFGTTASQTITGTNDPGTL----TGGWGDDTLDGGHAADTLTGGPGDDSLEGGRG 3578
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D + + A +I + D + E L AD ++S
Sbjct: 3579 SDLYLFEAGFGQDRIRDLG-----LTSFYSPLDVVEFGEGLALADLRVESTGTS 3627
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++ + TI + + G +GNDV+ G + + +GND G +G D
Sbjct: 5247 PAAGETVETSLGDDTILGTADSDLLDGLAGNDVLQGGAGRDTLIGGAGNDDLAGGTGRDI 5306
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+Y+ + + D L+ +RL F
Sbjct: 5307 LTDADGDDVYRYALGDGIDRITD--------LAGFDRLLFG 5339
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++ G +GND + +V GND+ G SG DT+ + I E
Sbjct: 3123 NLFGRAGNDTLETGRGADVLDGGLGNDLLQGHSGGDTYVFGHGDGQDVIADVE 3175
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E++ G G DV+ G ++ +GND DG G D + + ++
Sbjct: 4629 ETLAGGDGADVISGLGGDDSLSGGAGNDSLDGGPGADILAPGLGRDRLEGGPGADTFLLE 4688
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVK 357
D + +E F D ID +++
Sbjct: 4689 DGFD-----YVFLEAPLFYDTTIDILSLT 4712
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 41/163 (25%), Gaps = 35/163 (21%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + T + E++ G GND + G + GNDV G D + +
Sbjct: 3965 DADQTFTGGSSSETLSGGGGNDSLSGLDGEDTLTGGPGNDVLSGGDRNDVYRFEVGFGQD 4024
Query: 317 -------------KIYRFENAIIVYD--ANEHKQDFLSD--------------------V 341
+ F D A D + V
Sbjct: 4025 IVSDDGWSTRSGADVLSFGPGFSADDLEARADGADLVVSFSGRDERVTIARALEHSDFIV 4084
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E L F D + + TA + L D +
Sbjct: 4085 ETLLFDDGTTVAFADLLARVQAGTAGDDLLPGTQAGDSLAGLA 4127
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G + + G N+ F SG+DV G G D + Y +
Sbjct: 3680 QTLHGGFDGETLDGGGGNDSLFAGSGDDVITGGPGNDWLRGGFGNDTYSFASGFGQDTIS 3739
Query: 329 D---ANEHKQDFLSDVERLRFAD 348
D N D + L AD
Sbjct: 3740 DDGRTNNSPTDAVIFGAGLSAAD 3762
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 39/175 (22%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY------------------ID 244
G++ Y E + + YD+ D ++ T I I+
Sbjct: 4836 GDDTYIFEAAFGHDVLVLSRYDTDLDVVVFGTGIAPADVTVGLAGDNLLLLLDGGAHSIE 4895
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESV-------------VGSSGNDVVIGNSANNVFFE 291
L S + + A T+ + G++ +D + G A
Sbjct: 4896 LRP-SHGDVVTPLAEVRFADGTIWDGATLAGMASAAPAPLTGTASDDTLTGTDAWERLSG 4954
Query: 292 SSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLS 339
G+DV G SG D+ F + + QD ++
Sbjct: 4955 GDGDDVLSGGSGNDSLFGGNGDDSLTGGGGDDALSDDGGGATYLFSAGFGQDTIT 5009
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 33/127 (25%), Gaps = 3/127 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ I I + + + G+ G D++ G ++ + +D G G D
Sbjct: 6186 ERAVGGISDGADGSEIGGGPLADLIFGNGGGDILRGFGGDDSLAGGADDDSLFGGFGADL 6245
Query: 307 FFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A K + + D D F+ D
Sbjct: 6246 LSGDAGHDDLKGGGGDDVLSGGAGDDTLFGGDDEAEFAGNDVFSGGLGDDTLFGGTGNDT 6305
Query: 364 YTASYED 370
Y +D
Sbjct: 6306 YVFGADD 6312
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 48/157 (30%), Gaps = 6/157 (3%)
Query: 221 TIYDSG---GDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSSG 276
TI+D G + G + L +W + G + + ++ + +S+ G +G
Sbjct: 4916 TIWDGATLAGMASAAPAPLTGTASDDTLTGTDAWERLSGGDGDDVLSGGSGNDSLFGGNG 4975
Query: 277 NDVVIGNSANNVF--FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+D + G ++ +F G DT + + F+ + D +
Sbjct: 4976 DDSLTGGGGDDALSDDGGGATYLFSAGFGQDTITHRLDPAAPGVIVFDATVSPGDISVSG 5035
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D+ ++ Y D
Sbjct: 5036 GGEFDDITLHFANGADRLTILSWGPDDASYGIDRVDF 5072
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG + A ++ G G D + G ++V +G+D+ DG G DT+ + A
Sbjct: 4787 GGTRDDTLYASFYGATTLSGLEGADQLYGRDNDDVLIGGAGHDLLDGGEGDDTYIFEAAF 4846
Query: 314 YLYKIY 319
+
Sbjct: 4847 GHDVLV 4852
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 19/153 (12%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV---------VGSSGN 277
G D L +T + ++ ++ + A T+ + + G
Sbjct: 6868 GSDDLAVTFATTGDRLVLVDALGAANGARGSLTLQFADGTLWDRAAMRARALEDIQGDGA 6927
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D V G +++ S+G+D G G DT+ + A + +I D D
Sbjct: 6928 DNVEGFDGDDIITLSAGDDSASGGEGSDTYRFAAGAGDDRI---------RDGGTSGTDR 6978
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + L AD + + ++L A +D
Sbjct: 6979 IELI-GLSAADTSVSRLFRGSETVLLEFAGIDD 7010
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 7/154 (4%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + T+A + + G G+D + G + N+ G D+ G D +
Sbjct: 4623 SGDVADETLAGGDGADVISGLGGDDSLSGGAGNDSLDGGPGADILAPGLGRDRLEGGPGA 4682
Query: 314 YLYKIYRFENAIIVYDANEHKQDF-------LSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + + + L+ + + +
Sbjct: 4683 DTFLLEDGFDYVFLEAPLFYDTTIDILSLTHLAAADVVVGESPDYYLQIARASGEGRVVL 4742
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
Y+ ++V D SM + GRD D
Sbjct: 4743 DYDLQVEVRLSDATWSMDDLWAMADVTGRDGISD 4776
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 21/154 (13%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG D + L+ + L + GG ++T V +S+ G+ G+D + G
Sbjct: 4421 TGGIDAVHLSDGTIWD-HAALLARAVPPAGGQ--DITAPTGVVDDSLTGAGGDDDIRGVG 4477
Query: 285 ANNVF------------------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ +GND G G DT+ + ++ +N
Sbjct: 4478 GQDTLAGLGGNDDLYGGDGDDVLEGGAGNDGLYGGPGSDTYKFSLGFGQDRLSDGDNGEA 4537
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
LS + + D + +
Sbjct: 4538 ARVDRVEFDGTLSSSDLRVYTDGGMLFLTFAGTD 4571
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 25/171 (14%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWS--SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D + + D+ + I G + + + + G +G+D + G
Sbjct: 10553 GNDRITGS------QQDDVIDGGFGKDRIAGEGGDDRLFGGWSDDRLEGGAGDDTLDGGR 10606
Query: 285 ANNVFFESSGNDV------------FDGSSGLDTFFYYAPSYLYKIYRF-ENAIIVYDAN 331
+ +G+D DG SG D A S R + + ++D N
Sbjct: 10607 GRDRLEGGAGDDTFLIRGTEAARERIDGGSGFDAIEVVAGSGRLTHDRLVVDDVELFDGN 10666
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + +R+ F+ V++ ++++ +D+I D E
Sbjct: 10667 GAEVRGTARGDRIDFSG----FDTVREVAVIDGWFGNDDIIGSRQGDSIEG 10713
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + +I +SV G G+D + G S + +G+D G T A
Sbjct: 5410 LHGSDLGDSIDAGGGDDSVFGGLGDDSLSGGSGMDRLEGGAGDDTLAAGPGGGTLLGGAD 5469
Query: 313 SYLYKIYRFENAIIVYDA 330
Y+ + +IV D+
Sbjct: 5470 DDTYRFAASDGQVIVEDS 5487
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 58/200 (29%), Gaps = 26/200 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI---GGY 256
G G+++Y+ + I D G D L+L ++ +
Sbjct: 2886 GDRGDDVYRFTIGDGQD----VIEDIAGTDRLELVGYRPEDVRVERLAADRDDLILTFAG 2941
Query: 257 EKNMTIAQHTVIE-------------------SVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ I + +E + GS G+D++ G + V+ GND
Sbjct: 2942 SDDAVIIRGAALESVVFSYGTSWSRDALLDLVNATGSDGDDLLTGTPGSEVYRPGFGNDH 3001
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G D + + +I A L DV R A+ + +
Sbjct: 3002 VVDGLGDDVYTFARGDGQDRIESAGGADGFGAVLFGAGIALEDVTAKRDAEGNLILLIAG 3061
Query: 358 QRSILEYTASYEDLIQVIGQ 377
L D ++G
Sbjct: 3062 GDDRLTLVDPAADPDAIVGT 3081
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
ND G+ + +V F GND G +G DT+ + I
Sbjct: 1926 AGDFNDAYYGSGSGDVMFGGLGNDYLSGGAGGDTYIFRIGDGQDVIDDVGG 1976
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
ID ++ + + + T +S+ G +G+D + G ++ ++SG+DV
Sbjct: 5571 ATGETIDAGAGDD-TLTDLGGDDSFSGGTGDDSIEGGAGDDTLAGGPGDDTLSDASGDDV 5629
Query: 298 --FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSDVERLRFADQ 349
F G D A ++ A V + + D L ER+ A
Sbjct: 5630 YHFAAGDGQDRIEDLAGLDRIELGAGIAAADVRVSQQGGSDIVLHLPGEERITLAGA 5686
Score = 44.7 bits (104), Expect = 0.049, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 39/138 (28%), Gaps = 29/138 (21%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----------TLIGGVKNYIDL----- 245
G+++Y I D G D ++L + GG + L
Sbjct: 5625 SGDDVYHFAAGDGQDR----IEDLAGLDRIELGAGIAAADVRVSQQGGSDIVLHLPGEER 5680
Query: 246 --NTESWSSIGGYEKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGND 296
+ S + + + GS D + G A G+D
Sbjct: 5681 ITLAGALSDPDRAIEEVRLFSGVSWTFADILAAALAGSEARDEITGTGAGETLAGLGGDD 5740
Query: 297 VFDGSSGLDTFFYYAPSY 314
DG G DT F A S
Sbjct: 5741 SLDGQGGDDTLFGGAGSD 5758
Score = 44.3 bits (103), Expect = 0.057, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
D + G + ++ GND G G D + + A I+
Sbjct: 3842 DSLFGGNGDDTLEGGVGNDYLQGGFGNDVYGFEAGFGRDLIWDDG 3886
Score = 44.3 bits (103), Expect = 0.069, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 17/124 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + + G D DL L I+L + + + A TV
Sbjct: 5332 GFDRLLFGAGIVPSDVTVSGRDGADLVLRLADGGRIELI-GALGDAAQAIEEVAFADGTV 5390
Query: 268 ----------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + GS D + ++ F G+D G SG+D A
Sbjct: 5391 WTRADLIGFATAGTDAVQRLHGSDLGDSIDAGGGDDSVFGGLGDDSLSGGSGMDRLEGGA 5450
Query: 312 PSYL 315
Sbjct: 5451 GDDT 5454
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
Query: 273 GSSGNDVVIGNSAN-NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+ G++V++GN NV G+D G S DT+ + A +I +A V D
Sbjct: 2487 GNRGDNVIVGNPTAPNVLDGRQGDDRLVGGSAADTYAFGADYDFDRIEEAVDADGVIDRV 2546
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ D R+ A + +L D
Sbjct: 2547 QFGASVTRDALRITRAGDDLVIDLGNGTDVLTIAGGLAD 2585
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 8/128 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ GDD + G I L S+ G + +++ + + G G D + G
Sbjct: 5872 TAGDDSY--SGTEGDDTLIGL--GGDDSLFGLGGDDSLSGGADDDLLEGGDGADELSGGP 5927
Query: 285 ANNVFFESSGND--VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ G+D +F G+D + + + D
Sbjct: 5928 GFDSLAGGLGDDLYLFARGDGVDDIDVPGDGSADVLRIAGYGLDEVRFSRTGIDAADL-- 5985
Query: 343 RLRFADQC 350
+RFAD
Sbjct: 5986 TIRFADST 5993
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 15/125 (12%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D+V G+ ++V G+D G G D + + I +
Sbjct: 2860 GPGDDIVRGSDRDDVIEGRGGDDQLRGDRGDDVYRFTIGDGQDVIEDIAGTDRLELVGYR 2919
Query: 334 KQDFL-------SDVERLRFA---DQCIDSVNVKQRSILEYTASYE-----DLIQVIGQD 378
+D D L FA D I + + Y S+ DL+ G D
Sbjct: 2920 PEDVRVERLAADRDDLILTFAGSDDAVIIRGAALESVVFSYGTSWSRDALLDLVNATGSD 2979
Query: 379 VFESM 383
+ +
Sbjct: 2980 GDDLL 2984
Score = 41.6 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 69/229 (30%), Gaps = 50/229 (21%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------DLTL- 235
D +A G G ++ Y+ + DS G D + D+++
Sbjct: 5452 DDTLAAGPGGGTLLGGADDDTYRFAASDGQ----VIVEDSAGTDRIEMDAGLAPADVSVH 5507
Query: 236 ---------IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-----IESVVGSSGND--- 278
+ G + + L + + + + A TV + ++ ++G D
Sbjct: 5508 PSGDDLVLRVDGTEARLVLR-GARADATAEIEQVVFADGTVWTPATLRALAAANGGDAQS 5566
Query: 279 --------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFEN 323
+ + ++ + G+D F G +G D+ A +
Sbjct: 5567 IESDATGETIDAGAGDDTLTDLGGDDSFSGGTGDDSIEGGAGDDTLAGGPGDDTLSDASG 5626
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + A QD +E L D+ + + D++
Sbjct: 5627 DDVYHFAAGDGQD---RIEDLAGLDRIELGAGIAAADVRVSQQGGSDIV 5672
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 40/199 (20%)
Query: 214 KDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSSIGGYEKN 259
P I+ +GG D+L D +L GG + + G +
Sbjct: 6202 GGGPLADLIFGNGGGDILRGFGGDDSLAGGADDDSLFGGFGADLLSGDAGHDDLKGGGGD 6261
Query: 260 MTIAQHTVIESVVGS------SGNDVVIGNSANNVFFESSGNDV-----------FDGSS 302
++ +++ G +GNDV G ++ F +GND +
Sbjct: 6262 DVLSGGAGDDTLFGGDDEAEFAGNDVFSGGLGDDTLFGGTGNDTYVFGADDGTDRITDAG 6321
Query: 303 GLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFL--------SDVERLRFADQCIDS 353
G D + A + R +V + + +E + F D +
Sbjct: 6322 GDDRISFAAGVAPEDVSVRQAGHDLVLRVVGGTTRIVLVDALAGGTSIETVAFDDGTAWT 6381
Query: 354 VNVKQRSILEYTASYEDLI 372
+ + + T + L
Sbjct: 6382 WDDLLDASMLGTDGDDSLA 6400
Score = 41.3 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDT 306
+WS + + + IA+ + GND + G + ++ G+D +G S DT
Sbjct: 2208 TTWSYLKLLQHYVDIAR---------TDGNDTIYGFETISDRLDGGLGDDRLEGQSAGDT 2258
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ + A ++ A + +D
Sbjct: 2259 YVFAAGYGSDTVFDSAGADKIEFVGLTSEDV 2289
Score = 40.1 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 5/145 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G D D + IGG DL + + G+ + ++A +S+ G G D++ G
Sbjct: 6190 GGISDGADGSEIGGGP-LADLIFGNGGGDILRGFGGDDSLAGGADDDSLFGGFGADLLSG 6248
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++ ++ G+DV G +G DT F + + + D +D
Sbjct: 6249 DAGHDDLKGGGGDDVLSGGAGDDTLFGGDDEAEFAGNDVFSGGLGDDTLFGGTG--NDTY 6306
Query: 343 RLRFADQCIDSVNVKQRSILEYTAS 367
D + + + A
Sbjct: 6307 VFGADDGTDRITDAGGDDRISFAAG 6331
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 21/52 (40%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+VG++ + + G++ + +G+D G G D + + I
Sbjct: 2347 LVGTAAGETITGSNFGELLDGQAGDDTLIGGDGGDIYRFDIGYGQDVIVDTR 2398
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ---DFLSDVER 343
+ F +G+D +G G D + +Y +++D D +
Sbjct: 3842 DSLFGGNGDDTLEGGVGNDYLQGGFGNDVYGFEAGFGRDLIWDDGRTANSPADVVEFGAG 3901
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
L AD + + L + + +
Sbjct: 3902 LSLADLEVTATPQDLILTFAGRDDRLTLSRTVDR 3935
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 32/148 (21%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM-T 261
G++ Y+ D+GG D+ +G D+ S ++ T
Sbjct: 6577 GDDTYRFGPGDGQDRIA----DAGGA--ADVLALGAGIGPDDVRVSQSSDGSALILHIGT 6630
Query: 262 IAQHTVIESVVG-------------------------SSGNDVVIGNSANNVFFESSGND 296
+ IE +G S+ +D + G+ G+D
Sbjct: 6631 TGERIRIEDALGAGRIETVRFEGGPDWSVADLIARVPSNLDDRIFGDDIGETIVGGLGDD 6690
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G G DT+ + + N+
Sbjct: 6691 RVSGRGGDDTYLFARGDGRDILRDDANS 6718
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 43/145 (29%), Gaps = 28/145 (19%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDL----------TLIGGVKNYIDLNTESWSSIG 254
+ Y + + G D + G IDL + +
Sbjct: 2520 DTYAFGADYDFDRIEEAVDADGVIDRVQFGASVTRDALRITRAGDDLVIDLGNGT--DVL 2577
Query: 255 GYEKNMT--------IAQHTVI-------ESVVGSSGNDVVIG-NSANNVFFESSGNDVF 298
+ A TV+ + G+ ++ ++G ++ ++ +G+D
Sbjct: 2578 TIAGGLADTRVEEFRFADGTVLTLDEIIDRMLTGTERDEELLGLDNRDDTLSSGAGSDAM 2637
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFEN 323
+G G D++ + L I
Sbjct: 2638 EGGDGDDSYLWGYGDGLDSIRDTAG 2662
>gi|159046409|ref|YP_001542080.1| RTX toxins and related Ca2+-binding protein-like protein
[Dinoroseobacter shibae DFL 12]
gi|157914168|gb|ABV95599.1| hemolysin-type calcium-binding repeat protein [Dinoroseobacter shibae
DFL 12]
Length = 1164
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/301 (19%), Positives = 98/301 (32%), Gaps = 48/301 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG----KGTILSHNALHEIGH 130
+D + N G+ F+E N D+ R G G G + + L EIG
Sbjct: 874 GGADDDLLFGNAGHDTLLGQSGNDFLEGNA-GNDLIRGGSGHDWLTGGQGNDHLLGEIGD 932
Query: 131 AL--GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ GL + GG ++ ND DA + D
Sbjct: 933 DILWGLGGSDTLEGGDGADQLEGGDANDWL-------------FGDAGNDTLNGGVGFDW 979
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ G GN+I +++ GDD +L G N DL
Sbjct: 980 L---------DGGDGNDI------LTGLEGFDSLFGGAGDD----SLSGNAGN--DLIEG 1018
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ T+ I+ + G +GND++ G + + F +GND G G D
Sbjct: 1019 G-------AGDDTLQGGQGIDVLRGGAGNDLIRGQTGFDELFGGAGNDTLQGGEGNDRLA 1071
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A + + + + + DF V+RL + + ++LE +
Sbjct: 1072 GEAGNDVLTGGIGADVFVFDAGTDVITDFSLMVDRLALDGAALGIAGLDGATVLERFSQR 1131
Query: 369 E 369
+
Sbjct: 1132 D 1132
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 6/164 (3%)
Query: 226 GGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
GGDD ++ TL GG + + ++ G N + + + + G SG+D +
Sbjct: 858 GGDDWIEGGIGADTLEGGADDDLLFGNAGHDTLLGQSGNDFLEGNAGNDLIRGGSGHDWL 917
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G N+ G+D+ G G DT + + + + DA +
Sbjct: 918 TGGQGNDHLLGEIGDDILWGLGGSDTLEGGDGADQLEGGDANDW-LFGDAGNDTLNGGVG 976
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L D ++ L A + L G D+ E
Sbjct: 977 FDWLDGGDGNDILTGLEGFDSLFGGAGDDSLSGNAGNDLIEGGA 1020
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 2/139 (1%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L + + + G+ + I +++ G + +D++ GN+ ++ SGND +G++G
Sbjct: 845 LRGRAGNDRLMGHGGDDWIEGGIGADTLEGGADDDLLFGNAGHDTLLGQSGNDFLEGNAG 904
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + + N ++ + + L + L D L
Sbjct: 905 NDLIRGGSGHDWLTGGQ-GNDHLLGEIGDDILWGLGGSDTLEGGDGADQLEGGDANDWLF 963
Query: 364 YTASYEDLIQVIGQDVFES 382
A + L +G D +
Sbjct: 964 GDAGNDTLNGGVGFDWLDG 982
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTI-----YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
++ + ++ ++ + T +D G ++L+ + I S
Sbjct: 449 TVDDPVFNFSDTLDETSVLATRHSIQHWDEG--FTVNLSQNYELVRVI------ASKQSP 500
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ N+ + +++ G G+D + GN+ ++ F ++G D+ G +G DT
Sbjct: 501 GKGNLHLWGSDAGDALQGGGGSDTLEGNAGTDMLFGANGGDILRGGAGDDTLLGE 555
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 10/116 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G++G +++ G + N+ G+D +G G DT A L F NA
Sbjct: 834 ELLEGNAGVNILRGRAGNDRLMGHGGDDWIEGGIGADTLEGGADDDLL----FGNAGHDT 889
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ DFL L + L+ IG D+ +
Sbjct: 890 LLGQSGNDFLEG------NAGNDLIRGGSGHDWLTGGQGNDHLLGEIGDDILWGLG 939
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 58/186 (31%), Gaps = 29/186 (15%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKI-------YGAPKGSLGNNIYKIEVQQKDSPF 218
+ Q ++ D F + T + ++A + + + I +Q
Sbjct: 444 WSEQITVDDPVFNFSDTLDETSVLATRHSIQHWDEGFTVNLSQNYELVRVIASKQSPGKG 503
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
++ G D D GG + ++ N + G ++ + G +G+D
Sbjct: 504 NLHLW---GSDAGDALQGGGGSDTLEGNAGTDMLFGANGGDI----------LRGGAGDD 550
Query: 279 VVIGN---------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++G ++ + G D G +G D F A I+ F D
Sbjct: 551 TLLGEAGDDDLQGGDGADILHDGDGRDDLRGGTGADLFVLAADGLEDVIWDFNPEEDQLD 610
Query: 330 ANEHKQ 335
+
Sbjct: 611 LSAWTT 616
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ ++ V + N+ + +G D GS+G D F A L +I F D
Sbjct: 700 NITGNGTDENVRAGAGRNLLVDGAGADRMVGSAGADIFVLVADGALDEIVGFNPDEDRLD 759
Query: 330 ANEHKQ---------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + D R+ + D+ + +V + + D++++
Sbjct: 760 LSGWEMLRSTMQLSIAAIEDGARITYRDETLVLRSVDGAPLDPGVLAGLDMLEL 813
>gi|66046305|ref|YP_236146.1| hemolysin-type calcium-binding region:haemolysin-type calcium
binding related [Pseudomonas syringae pv. syringae
B728a]
gi|63257012|gb|AAY38108.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium
binding related [Pseudomonas syringae pv. syringae
B728a]
Length = 855
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G N T+ +++ G +G D + G + N+ + +G D DG G D
Sbjct: 498 GGDDTLYGLSGNDTLNGGAGNDTLYGGAGADTLDGGAGNDTLYGGAGADTLDGGVGNDNL 557
Query: 308 FYYAPSYLYKIYRFEN--AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ A + Y YR I YD++ D + + L AD + + +
Sbjct: 558 YGDAGNDTYLFYRGAGQDWISDYDSSAGNLDVIRVSDSLTPADIQLSRSAYDLYVGIAGS 617
Query: 366 ASYEDLIQVIGQDVFE 381
A + +
Sbjct: 618 ADKLTVSGWFSNTSTQ 633
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 76/249 (30%), Gaps = 65/249 (26%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT------------------- 234
+YG GN+ Y + + +G D L L
Sbjct: 376 LYG----GSGNDTYLFQRGGGQDVINDRDWTAGNIDTLKLAPGIVSTDIKVSRAGNNLEL 431
Query: 235 LIGGVKNYIDLNTESWS-------------------SIGGYEKNMTIAQHTVI------- 268
I G + I + +S ++ K + + V+
Sbjct: 432 AIIGTSDKITVRDWFYSADSQVEQVQFADGTLWDVATLNAMVKGVATEGNDVLQGEESVA 491
Query: 269 ---------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++ G SGND + G + N+ + +G D DG +G DT + A +
Sbjct: 492 DTLNGLGGDDTLYGLSGNDTLNGGAGNDTLYGGAGADTLDGGAGNDTLYGGAGADTLDGG 551
Query: 320 RFENAIIVYDANE-------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + N+ QD++SD + I + + ++ + S DL
Sbjct: 552 VGNDNLYGDAGNDTYLFYRGAGQDWISDYDSSAGNLDVIRVSDSLTPADIQLSRSAYDLY 611
Query: 373 QVIGQDVFE 381
I +
Sbjct: 612 VGIAGSADK 620
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 12/126 (9%)
Query: 227 GDDLLDLTLIGGVKNYIDL---NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G D + G D+ N S+ G + + I G GND++ G
Sbjct: 646 GIDAIRAMSSGTASQGNDVLYGNDALADSLSGLDGDDEI---------NGLGGNDILSGG 696
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ N+ + +GND G +G D + LY+ R + ++ D + +
Sbjct: 697 AGNDRLYGDAGNDTLTGGTGNDQLDGGRGNDLYQFERGDGQDVINDFDPDANTDVLQFGA 756
Query: 344 LRFADQ 349
ADQ
Sbjct: 757 GIAADQ 762
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GNDV++G + +++ G D DG +G D + + + Y R ++
Sbjct: 338 DQIYGLAGNDVLLGGAGDDLLDGGMGLDTLDGGAGNDMLYGGSGNDTYLFQRGGGQDVIN 397
Query: 329 DANE--HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D + D L + D + + T+ +
Sbjct: 398 DRDWTAGNIDTLKLAPGIVSTDIKVSRAGNNLELAIIGTSDKITVRDWF 446
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T+ + G SG+D + G SAN++ +GND G G DT+ +Y + F+
Sbjct: 1 MGDTMATIINGQSGDDWLYGTSANDILDGGAGNDRLSGGLGNDTYLFYRGMGQDTVTDFD 60
Query: 323 NAIIVYDANEHKQDF 337
+ D + D
Sbjct: 61 WTVGNIDTIKVAADI 75
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 24/157 (15%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T++D D L G + D T+ + + G +GND +
Sbjct: 121 TVWD---IDTLKTMTRGVASDTAD----------------TLYGDVGDDVLDGLNGNDKL 161
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G N++ GND +G +G DT A + ++ + N++ +
Sbjct: 162 YGEEGNDLLSGGEGNDTLNGGTGNDTLNGGAGNDSLSGDDGDDTLDGGAGNDYLSGSRGN 221
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
L + D+++ + TA D I+V
Sbjct: 222 DTYLFYRGMGQDTISE-----FDTTAGNADTIKVAAD 253
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 25/146 (17%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-------------- 298
I G N + + + G G D + G + N++ + SGND +
Sbjct: 340 IYGLAGNDVLLGGAGDDLLDGGMGLDTLDGGAGNDMLYGGSGNDTYLFQRGGGQDVINDR 399
Query: 299 -DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----------SDVERLRFA 347
+ +DT I + A D + S VE+++FA
Sbjct: 400 DWTAGNIDTLKLAPGIVSTDIKVSRAGNNLELAIIGTSDKITVRDWFYSADSQVEQVQFA 459
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQ 373
D + V + D++Q
Sbjct: 460 DGTLWDVATLNAMVKGVATEGNDVLQ 485
>gi|1418215|dbj|BAA13071.1| matrix metalloproteinase, MT2MMP [Homo sapiens]
gi|30582269|gb|AAP35361.1| matrix metalloproteinase 15 (membrane-inserted) [Homo sapiens]
Length = 564
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + ++ E R A W + L F+E
Sbjct: 27 YALTGRKWNNHHLTFSIQNYTEKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 79
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 80 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 139
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + N +M+ F
Sbjct: 140 STDLHGNNLFLVAVHELGHALGLEHSSNPNA-------------------IMAPFYQWKD 180
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 181 VDNFK------LPEDDLRGIQQLYGTPDG 203
>gi|124026282|ref|YP_001015398.1| hypothetical protein NATL1_15761 [Prochlorococcus marinus str.
NATL1A]
gi|123961350|gb|ABM76133.1| Hypothetical protein NATL1_15761 [Prochlorococcus marinus str.
NATL1A]
Length = 580
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GSS ND + G+S+N FF S G+D+ +G G DT Y Y R +N++ + D
Sbjct: 303 GSSSNDELTGSSSNETFFASEGSDIINGKGGNDTSIYSGKFSDYSFTREDNSLAIADQRT 362
Query: 333 H---KQDFLSDVERLRFADQCIDSVNVK 357
D LS++E ++F+DQ ++ V
Sbjct: 363 GKNNGTDTLSNIEYIQFSDQKVEESKVD 390
>gi|91089485|ref|XP_969495.1| PREDICTED: similar to matrix metalloproteinase [Tribolium
castaneum]
Length = 632
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 41/205 (20%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW-ALGEWSKVVDLTFEET-SIH 76
R + ++ + ++ LT S D+ ++P + AL W++ LTF E S
Sbjct: 107 RRKRFTLHGQKWPYTNLTWSLRSRDLMGMDPYQVRLVISKALDVWARHSKLTFTEVDSPK 166
Query: 77 SDI-----------KFISSNNGYVCTPRY--DSRYFMEINFDKADVWR--YGIGKGTILS 121
+DI F G + + + + ++++FD + W +GT L
Sbjct: 167 ADILIFFVRGEHGDNFPFDGKGVILAHAFFPNGGHSIDVHFDADEAWTTVPNSDEGTNLF 226
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ A HE GH+LGL H +M + + G+
Sbjct: 227 NVAAHEFGHSLGLSHSSEEGA-------------------LMYPW-----YKEMENGFDY 262
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNI 206
D + +Q +YGA L + I
Sbjct: 263 ELPDDDKLGIQALYGARTTRLWDRI 287
>gi|326669661|ref|XP_002662954.2| PREDICTED: matrix metalloproteinase-15-like [Danio rerio]
Length = 655
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 62/210 (29%), Gaps = 56/210 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L W I + T ++ E R A W KV LTF+E
Sbjct: 116 YALTGHKWDKTHITFSIQNYTPKIGEYNSYE-------AIRRAFRVWEKVTPLTFDEIPF 168
Query: 76 H---------------------SDIKFISSNNGYVCTPRYDSRY-FMEINFDKADVWRYG 113
H D G++ + + +FD + W G
Sbjct: 169 HEVKYGRRKEPDIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGMGGDTHFDSDEPWTIG 228
Query: 114 IGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + +M+ F
Sbjct: 229 SQNLQGNDLFLVAVHELGHALGLEHSNNPLA-------------------IMAPFYQWMD 269
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ D+ VQ+IYG P S
Sbjct: 270 TENFE------LPEDDLRGVQQIYGPPSSS 293
>gi|118100110|ref|XP_415771.2| PREDICTED: similar to matrix metalloproteinase-28 [Gallus gallus]
Length = 498
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 65/194 (33%), Gaps = 48/194 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
W + Y+ + ++ + R A WS V L F E +D
Sbjct: 106 GSKWHKRHLTYRMVNWPPYLPQHEV-------RLAVRAAFELWSNVSSLVFWEARDGPAD 158
Query: 79 IKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNALH 126
I+ NN + + F E +FD A+ W GKG L H
Sbjct: 159 IRLTFFHGDHNDGLNNAFDGPGGALAHAFFPRRGEAHFDSAERWSLHSGKGRNLFVVVAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYCATPMV 185
E+GH LGL H +++MS Y+ + D +
Sbjct: 219 EVGHTLGLEHS-------------------PTKSALMSPYY--KKLGKDFVLNW------ 251
Query: 186 SDIVAVQKIYGAPK 199
DI+A+Q +YG P
Sbjct: 252 DDILAIQNLYGKPS 265
>gi|238795300|ref|ZP_04638878.1| serine protease [Yersinia intermedia ATCC 29909]
gi|238725372|gb|EEQ16948.1| serine protease [Yersinia intermedia ATCC 29909]
Length = 1814
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 10/153 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA--QHTV 267
V K T+ GG+D+L G KN I + G + + A Q ++
Sbjct: 667 SVFIKGGSGNATLVGGGGNDVL---AGGSGKNRIVGGSGKAVIYAGSQGDTIYAAEQGSI 723
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I G D + GN ++V GN + DG G++ + Y I R ++ +
Sbjct: 724 I---HAGGGADRIYGNKGHDVIEAGQGNALIDGGGGINLVTLHGSYADYAITRTDSGYQI 780
Query: 328 YD--ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
D A L ++++L FAD +N
Sbjct: 781 RDSVAGRDGTLTLKNIQKLNFADISAVDLNTNN 813
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 4/117 (3%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G S +D++ + + G++ + G SG D F A +I V
Sbjct: 574 NIYGGSRDDILTASPKGSWLVGRGGSNTYIGKSGNDVFVISASDDPTRIRGNGGRDTVLI 633
Query: 330 ANEHKQDF---LSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
S + + D I ++ + L+ G DV
Sbjct: 634 VGNKGVALNMARSGITIAQGGDGDDIIVSGGNNSVFIKGGSGNATLVGGGGNDVLAG 690
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 63/164 (38%), Gaps = 19/164 (11%)
Query: 193 KIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDS-----GGDDLLDLTLIGGVKNYID 244
+++G K + + + Q ++ P + D+ GG + L++ I G +
Sbjct: 1408 RLFG-NKLNADDTYFYTDEFAAQVEEQPARALLDDAVNGTVGGRNTLNMAAISG-NVVAN 1465
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + + N+T+ I ++ G+D + ++ G +V G +G
Sbjct: 1466 LASG---NAKLGRANLTLRSPEAIHNLFSGDGDDSLTAGGGGSLLDGGRGKNVLTGGTGK 1522
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
D F + + II +DAN + L L+F++
Sbjct: 1523 DAFVVRQRAN------GRDEIINFDANNGETIHLVGFSGLKFSE 1560
>gi|537929|gb|AAA99983.1| matrilysin [Mus musculus]
gi|1098307|prf||2115376A matrilysin
Length = 264
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 67/212 (31%), Gaps = 48/212 (22%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W + + Y+ T+ + ++ + AL W
Sbjct: 84 KPRCGVPDVAEYSLMPNSPKWHSRIVTYRIVSYTSDLPRIVV-------DQIVKKALRMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKAD 108
S + L F+ S +DI + + F + +FDK +
Sbjct: 137 SMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W G A HE GH+LGL H S +VM
Sbjct: 197 YWTDDEDAGVNFLFAATHEFGHSLGLSHS-------------------SVPGTVM----Y 233
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D S + T DI +QK+YG
Sbjct: 234 PTYQRDYSEDFSLT--KDDIAGIQKLYGKRNT 263
>gi|115668714|ref|XP_786545.2| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
gi|115931871|ref|XP_001182435.1| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
Length = 526
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 77/209 (36%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
R + L D W + ++ + T + +E+ AL WS LT
Sbjct: 94 INRARRYALSDVKWFKTDLTWRLENTTPDLRRSSV-------REIIARALKHWSDASQLT 146
Query: 70 FEET-SIHSDI--KFISSNNG-------------YVCTPRYDSRYFM--EINFDKADVWR 111
F E S +D+ KF S ++G + P + RY + + +FD+A+ +
Sbjct: 147 FREVQSGDADLLMKFTSRDHGDGNPFDGSGKVLAHAFFPTSERRYSIAGDAHFDEAETYT 206
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
GT L A+HE GH+LGL H + + +M+
Sbjct: 207 DNSYAGTNLFQVAVHEFGHSLGLGHSNNPDA-------------------IMA------- 240
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + A DI +Q +YGA G
Sbjct: 241 AIYRGYVPNAELREDDIAGIQALYGANSG 269
>gi|296447261|ref|ZP_06889190.1| glycosyl transferase family 2 [Methylosinus trichosporium OB3b]
gi|296255223|gb|EFH02321.1| glycosyl transferase family 2 [Methylosinus trichosporium OB3b]
Length = 978
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 26/159 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIAS--------- 448
FD YL + D+ + + +H++ HG +EGRNP AF L Y+A+
Sbjct: 12 FDKTYYLKANPDV----AASKANPFKHFMRHGWREGRNPSAAFDCLYYLATRDLSLETNA 67
Query: 449 ---HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ D + ++ L G+D F E R D+ Y Y +V
Sbjct: 68 LTHYVDCVWPLSEG--LAPSGEDEVVRFQIETVR-PHVDASFYRARYGLDEDV------D 118
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
AA HY+ G K +P F + E + + + +P
Sbjct: 119 AAEHYLRVGCKLLFDPSPFFSTERHLEAHPFLRSASASP 157
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 24/134 (17%)
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHE 534
E RF FD YL + D+ + + +H++ HG +EGRNP AF L Y+A+ +
Sbjct: 7 NERRF--FDKTYYLKANPDVA----ASKANPFKHFMRHGWREGRNPSAAFDCLYYLATRD 60
Query: 535 -----DLINAFAD-----APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFG 584
+ + + D + L +G+D F E R + Y Y
Sbjct: 61 LSLETNALTHYVDCVWPLSEGLAPSGEDEVVRFQIETVR-PHVDASFYRARYG------L 113
Query: 585 SDRSAAAQHYITHG 598
+ AA+HY+ G
Sbjct: 114 DEDVDAAEHYLRVG 127
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 50/166 (30%), Gaps = 40/166 (24%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y + D+ KHF G EGR+ + FD YL + DL
Sbjct: 10 RFFDKTYYLKANPDVAA----SKANPFKHFMRHGWREGRNPSAAFDCLYYLAT-RDLSL- 63
Query: 415 FGSDRGAAARHYITHGV--KEGRNPD------AF---------KALEYIASHEDLINAFA 457
A HY+ EG P F A Y A +
Sbjct: 64 ----ETNALTHYVDCVWPLSEGLAPSGEDEVVRFQIETVRPHVDASFYRARY-------- 111
Query: 458 DAPDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGS 501
D +H+ GC+ F + +L ++ LR+ S
Sbjct: 112 -GLDEDVDAAEHYLRVGCKLLFDPSPFFSTERHLEAHPFLRSASAS 156
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR--ALGISGMQFKSVMNLS 619
F+ YL + D+ + ++ +H++ HG +EGR + + + + +LS
Sbjct: 12 FDKTYYLKANPDVA----ASKANPFKHFMRHGWREGRNPSAAFDCLYYLATRDLS 62
>gi|300705400|ref|YP_003747003.1| calcium binding hemolysin protein (modular protein) [Ralstonia
solanacearum CFBP2957]
gi|299073064|emb|CBJ44421.1| Putative calcium binding hemolysin protein (modular protein)
[Ralstonia solanacearum CFBP2957]
Length = 2266
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 74/235 (31%), Gaps = 23/235 (9%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S +V YF + +D T D+ AV+ + P +N+Y
Sbjct: 1395 NGSDRITVQYYFSSDATGPYRIDQVRFADGT--TWDVAAVKALVQVPTSGA-DNLYGYAS 1451
Query: 212 QQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ GG+D L ++ G + N T+ +
Sbjct: 1452 DDVLNGLDGNDTLRGYGGNDTLRG-------------DAGADTLYGGDGNDTVDGGADND 1498
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-- 327
+ G +G+D ++G + N+ + SGND +G +G D S Y +
Sbjct: 1499 YLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINN 1558
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
YD + D ++ E + D L + + D
Sbjct: 1559 YDTTSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDRVTVQYYFSSDATGP 1613
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 19/233 (8%)
Query: 155 NDSFLTSVMSYFMPQDSMM-DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
N S +V YF + A D+ AV+ + P +N+Y
Sbjct: 795 NSSDKITVQYYFSGDGAGAYRVDLIRFADGTSWDVAAVKALVQVPTSGA-DNLYGYASDD 853
Query: 214 --KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
T+ GG+D L ++ G + N T+ + +
Sbjct: 854 VLNGLDGNDTLRGYGGNDTLRG-------------DAGADTLYGGDGNDTVDGGADNDYL 900
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YD 329
G +G+D ++G + N+ + SGND +G +G D S Y + YD
Sbjct: 901 YGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINNYD 960
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D ++ E + D L + + D
Sbjct: 961 TTSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDRITVQYYFSSDATGP 1013
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 73/200 (36%), Gaps = 21/200 (10%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S +V YF + +D T D+ AV+ + P +N+Y
Sbjct: 1595 NGSDRVTVQYYFSSDATGPYRIDQVRFADGT--TWDVAAVKALVQVPTSGA-DNLYGYAS 1651
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIES 270
+ G+D L G L ++ + + G + N T+ +
Sbjct: 1652 DDVLNGL-------DGNDTLR-----GYAGNDTLRGDAGADTLYGGDGNDTVDGGADNDY 1699
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--Y 328
+ G +G+D ++G + N+ + SGND +G +G D S Y + Y
Sbjct: 1700 LYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINNY 1759
Query: 329 DANEHKQDFLSDVERLRFAD 348
D + + D ++ E + D
Sbjct: 1760 DTSSGRSDVIAFGEGITATD 1779
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 75/234 (32%), Gaps = 21/234 (8%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S +V YF + +D T D+ AV+ + P +N+Y
Sbjct: 1195 NGSDRVTVQYYFSSDATGPYRIDQVRFADGT--TWDVAAVKALVQVPTSGA-DNLYGYAS 1251
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIES 270
+ G+D GG L ++ + + G + N + +
Sbjct: 1252 DDVLNGL-------DGNDT--FRGYGGNDT---LRGDAGADTLYGGDGNDMLDGGADNDY 1299
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--Y 328
+ G +G+D ++G + N+ + SGND +G +G D S Y + Y
Sbjct: 1300 LYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINNY 1359
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + D ++ E + D L + + D
Sbjct: 1360 DTTSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDRITVQYYFSSDATGP 1413
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 64/191 (33%), Gaps = 12/191 (6%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S +V YF + +D T D+ AV+ + P +N+Y
Sbjct: 1995 NGSDRITVQYYFSSDATGPYRIDQVRFADGT--TWDVAAVKALVQVPTSGA-DNLYGYAS 2051
Query: 212 QQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T GG+D L D N + G N + +
Sbjct: 2052 DDVLNGLDGNDTFRGYGGNDTLRGDAGADTLYGGDGNDM----LDGGADNDYLYGENGDD 2107
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S++G +GND + G S N+ SGND G G DT+ + + I ++ D
Sbjct: 2108 SLLGGAGNDTLYGGSGNDTLEGGSGNDYLSGEGGSDTYVFKSSWGQDTINNYDTTSSRSD 2167
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 2168 VIAFGTGIATD 2178
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Query: 244 DLNTESWSSIGGYEKNM-TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+L S + + I + +V GND V G++ N+ SGND G+
Sbjct: 681 NLTGTSQPDLLVGTNTVDYIYGRDGNDVLVAKGGNDYVYGDAGNDTLDGGSGNDHLSGNE 740
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G DT+ + A I ++ + D +
Sbjct: 741 GSDTYVFNAGWGQDTINNYDTSSGRSDTITFGTGIATS 778
>gi|57529313|ref|NP_001006278.1| matrilysin [Gallus gallus]
gi|53126797|emb|CAG30985.1| hypothetical protein RCJMB04_1g18 [Gallus gallus]
Length = 263
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 62/195 (31%), Gaps = 47/195 (24%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W+ ++ YK T + + R AL WS V L F+ + +DI
Sbjct: 102 RWNKKYLTYKIVNYTPDLPREYV-------DDAIRRALMVWSNVTPLRFKRVTSGQADIM 154
Query: 81 FISS----NNGYVCTPRYDSRYF---------MEINFDKADVWRYGIGKGTILSHNALHE 127
+ +GY R + + +FD + W +G L A HE
Sbjct: 155 IKFARRAHGDGYPFDGRGGTLAHAFQPGEGLGGDAHFDDDERWS-KYNQGVNLFLVAAHE 213
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H + + SY P+ T D
Sbjct: 214 FGHSLGLAHSNVRGA---------------LMYPLYSYVNPET----------FTLHWDD 248
Query: 188 IVAVQKIYGAPKGSL 202
+QK+YG +
Sbjct: 249 RRGIQKLYGRNSANS 263
>gi|114662852|ref|XP_523380.2| PREDICTED: matrix metalloproteinase 15 isoform 2 [Pan troglodytes]
Length = 671
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + ++ E R A W + L F+E
Sbjct: 134 YALTGRKWNNHHLTFSIQNYTEKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 186
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 187 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 246
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + N +M+ F
Sbjct: 247 STDLHGNNLFLVAVHELGHALGLEHSSNPNA-------------------IMAPFYQWKD 287
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 288 IDNFK------LPEDDLRGIQQLYGTPDG 310
>gi|325127694|gb|EGC50606.1| iron-regulated protein frpA [Neisseria meningitidis N1568]
Length = 810
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 534 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 591
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 592 GNTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 629
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 630 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 687
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 688 GEGFGQDTVYN 698
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y + + +
Sbjct: 594 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGE 653
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 654 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 713
Query: 390 GLS 392
+
Sbjct: 714 KAA 716
>gi|308488618|ref|XP_003106503.1| hypothetical protein CRE_15976 [Caenorhabditis remanei]
gi|308253853|gb|EFO97805.1| hypothetical protein CRE_15976 [Caenorhabditis remanei]
Length = 575
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 65/205 (31%), Gaps = 50/205 (24%)
Query: 13 IADHLLRDQY---WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
L WS + Y + ++ D+ + A G W+KV L
Sbjct: 126 APLALTSGSSQFKWSKTRLTYSIESWSSDLPKDDV-------RRAIAEAYGVWAKVTPLE 178
Query: 70 FEETSIHSD----IKFISSN---------NGYVCTPRYDSRYFMEINFDKADVWRYG--- 113
F E S I+F + N G V M +FD + W Y
Sbjct: 179 FSEVPAGSTSDIKIRFGTRNHNDPWPFDGEGGVLAHATMPESGM-FHFDDDENWTYKDAR 237
Query: 114 ---IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
T L A+HE GH LGL H N +M+ F +
Sbjct: 238 KIHSNSATDLLAVAIHEGGHTLGLEHSRDENA-------------------IMAPFYQKT 278
Query: 171 SMMDASFGYCATPMVSDIVAVQKIY 195
+ + ++ Y DI A+Q IY
Sbjct: 279 TDSNGNYVYPN-LKSDDISAIQAIY 302
>gi|148683759|gb|EDL15706.1| matrix metallopeptidase 28 (epilysin), isoform CRA_c [Mus musculus]
Length = 529
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 56/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 160 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 212
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD + W +G L
Sbjct: 213 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRRGRNLFVVLA 272
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 273 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 306
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 307 -DDVLAVQSLYGKPLGRS 323
>gi|325138393|gb|EGC60961.1| Iron-regulated protein frpC [Neisseria meningitidis ES14902]
Length = 1095
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 619 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 676
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 677 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 714
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 715 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 772
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 773 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 820
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 819 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 876
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 877 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 914
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 915 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 972
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 973 GKGFGQDTVYN 983
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 526 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 585
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 586 YATGRKDIIRFTDGITAD 603
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 879 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 938
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 939 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 998
Query: 390 GLS 392
+
Sbjct: 999 KAA 1001
>gi|291567841|dbj|BAI90113.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 558
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 8/134 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +P TIY G+D L + L GG N L ++ G + N +
Sbjct: 323 NDLLRGTPGNDTIYGLAGNDTLIGGKGNDFLDGGPGNDRLLGGAGHDTLIGGKGNDFLDG 382
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+S+VG G D +IG N+ +G D+ G G D F + +
Sbjct: 383 GPGNDSLVGGPGRDTLIGGKGNDTLNGGAGQDILTGGPGADIFVFGFGESR---VAAPDH 439
Query: 325 IIVYDANEHKQDFL 338
I +D K D L
Sbjct: 440 ITDFDIGTDKIDLL 453
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 8/138 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI ++++G GND + G N+ +G+D G G D
Sbjct: 326 LRGTPGNDTIYGLAGNDTLIGGKGNDFLDGGPGNDRLLGGAGHDTLIGGKGNDFLDGGPG 385
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFLS---DVERLRFADQCIDSVNVKQRSILEY 364
+ + +I N+ QD L+ + F + +
Sbjct: 386 NDSLVGGPGRDTLIGGKGNDTLNGGAGQDILTGGPGADIFVFGFGESRVAAPDHITDFDI 445
Query: 365 TASYEDLIQVIGQDVFES 382
DL+ G+D+
Sbjct: 446 GTDKIDLLNRRGRDIGAP 463
>gi|114640096|ref|XP_508722.2| PREDICTED: interstitial collagenase isoform 3 [Pan troglodytes]
Length = 469
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 65/208 (31%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ +A+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV------DHAIAK-AFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLYRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|170747639|ref|YP_001753899.1| hypothetical protein Mrad2831_1212 [Methylobacterium radiotolerans
JCM 2831]
gi|170654161|gb|ACB23216.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 305
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 45/130 (34%), Gaps = 22/130 (16%)
Query: 394 GRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHED 451
GR FD+ YL S D+ + HY+ +G +G +P + F L Y
Sbjct: 24 GRVPKIFDATFYLKSNPDV----AASGLDPYFHYVYYGSSQGLDPAEDFHTLFYRKQSGP 79
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
H+ +G + G F S YL Y D+ H
Sbjct: 80 ----------TKLDPVRHYIRYGVKLGIDPNPNFSSSSYLARYPDVAER----AINPLLH 125
Query: 510 YITHGVKEGR 519
Y T+G EGR
Sbjct: 126 YRTNGKLEGR 135
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR P F A Y+ S+ D+ + D H+ +G +G D +
Sbjct: 24 GRVPKIFDATFYLKSNPDVAASGLDP-------YFHYVYYGSSQGLDPAEDFHTLF---- 72
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
R G + RHYI +GVK G +P+ F + Y+A + D+ +
Sbjct: 73 -YRKQSGPTKLDPVRHYIRYGVKLGIDPNPNFSSSSYLARYPDVAERAINP-------LL 124
Query: 553 HFSNFGYEEGR 563
H+ G EGR
Sbjct: 125 HYRTNGKLEGR 135
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 21/130 (16%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y S D+ + H+ +G S+G D F + Y G
Sbjct: 30 FDATFYLKSNPDVAA----SGLDPYFHYVYYGSSQGLDPAEDFHTLFYRKQ-------SG 78
Query: 417 SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ RHYI +GVK G +P+ F + Y+A + D+ + H+ G
Sbjct: 79 PTKLDPVRHYIRYGVKLGIDPNPNFSSSSYLARYPDVAERAINP-------LLHYRTNGK 131
Query: 476 EEGRFVTFDS 485
EGR + +
Sbjct: 132 LEGRLASASA 141
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 48/136 (35%), Gaps = 22/136 (16%)
Query: 478 GRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHED 535
GR FD+ YL S D+ G D HY+ +G +G +P + F L Y
Sbjct: 24 GRVPKIFDATFYLKSNPDV-AASGLD---PYFHYVYYGSSQGLDPAEDFHTLFYRKQSGP 79
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
H+ +G + G + F+ YL Y D+ H
Sbjct: 80 ----------TKLDPVRHYIRYGVKLGIDPNPNFSSSSYLARYPDVAER----AINPLLH 125
Query: 594 YITHGMKEGRALGISG 609
Y T+G EGR S
Sbjct: 126 YRTNGKLEGRLASASA 141
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 13/99 (13%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FD 400
+ + L Y + G + ++H+ +G+ G D F
Sbjct: 52 HYVYYGSSQGLDPAEDFHTLFY-------RKQSGPTKLDPVRHYIRYGVKLGIDPNPNFS 104
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
S YL Y D+ HY T+G EGR A
Sbjct: 105 SSSYLARYPDVAE----RAINPLLHYRTNGKLEGRLASA 139
>gi|87118818|ref|ZP_01074717.1| hypothetical protein MED121_17364 [Marinomonas sp. MED121]
gi|86166452|gb|EAQ67718.1| hypothetical protein MED121_17364 [Marinomonas sp. MED121]
Length = 1167
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 12/190 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNM 260
GN++Y KD G+D + + +DLN E SS G +
Sbjct: 509 GNDLY----NHKDDDVGVYFNGGEGNDTISFYEYEAEEEGVTVDLNDEVQSSFGDGGLDA 564
Query: 261 TIAQHTV---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +E+VVG+ +DV+ GN+ NN+ GN++ DG +G D Y + Y
Sbjct: 565 DESDDVTLISVENVVGTQYDDVITGNNENNLLMGLEGNNILDGDNGFDIARYSGSIWDYT 624
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I ++++ AN D LS++E L F D + + + + Y + D IQ
Sbjct: 625 INTNMSSVVNSSAN--INDSLSNIEFLSFEDDDGLYFYSSETGELSIYASDNGDSIQGTP 682
Query: 377 QDVFESMKHF 386
F
Sbjct: 683 SGSDAVDWIF 692
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 21/173 (12%)
Query: 218 FIQTIYDSGGDDLLDLTLIG-GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T +D G D L D+ LI G IDL +S G N + + + G G
Sbjct: 759 YYNTNFDEGTDTLYDIDLISFGDGAVIDLENQSI-YTGNSNDNDIYGSDSSDDWLFGGDG 817
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSS-------GLDTFFYYAPSYLYKIYRFENA----- 324
+D + G ++ G+D G S G DT +Y + + + ++
Sbjct: 818 DDTIRGRQGDDHLVGGKGDDYLYGRSVSNTENTGTDTAYYAGSVAEFMMTNYVDSNGDTQ 877
Query: 325 -------IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ QD LS +E +F D + + D
Sbjct: 878 DDMFIIEDLATSGYNEGQDILSQIEYAQFGDGVLIDLVNTNIVFDGDGTKTTD 930
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 10/97 (10%)
Query: 268 IESVVGSSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY---KIYRF 321
I+ G S +D + + ++ G+D+ +G SG DT +Y A Y I
Sbjct: 940 IDIFSGESSSDNDSNIDAMAGDDHIVGGEGDDIIEGGSGADTAYYGASVAEYLVDYISDT 999
Query: 322 ENAIIVYDANE----HKQDFLSDVERLRFADQCIDSV 354
+ V D D L++VE L F D +
Sbjct: 1000 DIETTVEDIGSTEIDDGTDTLTNVETLHFGDGVTIDI 1036
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 15/220 (6%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
+ S + A + D+ + + G +I + V S + GGDD
Sbjct: 57 SNGAYLSINFDAEYLGDDVQTLDVVMGDYS-----DIVYMNVDNSSSNLDTNFWLGGGDD 111
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LL Y D ++++ ++ G E N I ++ G G+D + G ++
Sbjct: 112 LL------VSDFYNDNDSDTNDTVYGQEGNDEIYLGNGNDNGSGGQGDDSLFGGDGSDDL 165
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ SG+D +G +G D + + Y D L+ +
Sbjct: 166 YGGSGHDYLEGGNGTDYLSGGSDND----YLNGGDGADILEGGGGDDVLTGGKINSSGVD 221
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + ++ AS G D +
Sbjct: 222 YVTGGSGQDIFLINEWASSTTSADAFGSDWTTWRAVYATS 261
>gi|71275981|ref|ZP_00652263.1| Hemolysin-type calcium-binding region:Glycosyl hydrolase, BNR
repeat:Haemolysin-type calcium binding related [Xylella
fastidiosa Dixon]
gi|71899076|ref|ZP_00681241.1| Hemolysin-type calcium-binding region:Glycosyl hydrolase, BNR
repeat:Haemolysin-type calcium binding related [Xylella
fastidiosa Ann-1]
gi|71163214|gb|EAO12934.1| Hemolysin-type calcium-binding region:Glycosyl hydrolase, BNR
repeat:Haemolysin-type calcium binding related [Xylella
fastidiosa Dixon]
gi|71731189|gb|EAO33255.1| Hemolysin-type calcium-binding region:Glycosyl hydrolase, BNR
repeat:Haemolysin-type calcium binding related [Xylella
fastidiosa Ann-1]
Length = 1642
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 5/151 (3%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D +T NY+ + + I G + N TI + + + G +D +IG
Sbjct: 931 WDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDTIYGGALADILDGGHSDDTLIG 990
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-----IIVYDANEHKQDF 337
N+ ++ F +GND+ G G DT + + + + D E
Sbjct: 991 NAGDDTLFGGTGNDMLSGGKGADTLDGGSGNDTLNGGTGNDTYRFAIGVGVDRIEDSDST 1050
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + +RFAD ++ +R + Y
Sbjct: 1051 PGNTDVVRFADVASTALTALERKDNDLVIKY 1081
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Query: 195 YG-APKGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
YG + + ++ N Y E + + F + +D +T NY+ + +
Sbjct: 1407 YGTSDQLTISNYFYSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNR 1466
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N I + + + G +GND++ G + SGNDV G +G D + +
Sbjct: 1467 IYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMYRFAIG 1526
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + +I ++ D Q +
Sbjct: 1527 AGVDRIEDYDTTTGNADVLSIGQGVSIN 1554
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 7/135 (5%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D ++ N I + + I G + N I + + + G +GND++ G
Sbjct: 769 WDEAAIKARVISNGDASNNTIIGYKDGSNRIYGLDGNDEIYGGALADILDGGAGNDMLSG 828
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ SGND +G +G DT+ + + +I D+ D + +
Sbjct: 829 GGGADTLDGGSGNDTLNGGTGNDTYRFAIGVGVDRIED-------SDSTPGNTDVVRFAD 881
Query: 343 RLRFADQCIDSVNVK 357
A ++ +
Sbjct: 882 VASTALTALERKDND 896
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 15/176 (8%)
Query: 195 YG-APKGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
YG + + ++ N Y E + + F + +D +T NY+ + +
Sbjct: 1245 YGTSDQLTISNYFYSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNR 1304
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N I + + + G +GND++ G + SGNDV G +G D + +
Sbjct: 1305 IYGLDGNDEIYGGALNDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMYRFAIG 1364
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + +I + + + +RFAD ++ +R + Y
Sbjct: 1365 AGVDRIEESDT-------------TAGNTDVVRFADVASTALTALERKDSDLVIKY 1407
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 13/146 (8%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D +T NY+ + I G + N I + + + G +GND++ G
Sbjct: 1113 WDEAAIKARVITNGDASNNYLRGYNNGSNCIYGLDGNDEIYGGALDDMLYGGAGNDMLSG 1172
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ SGNDV G +G DT+ + + + +I + + +
Sbjct: 1173 GKGADTLDGGSGNDVLYGGTGNDTYRFAIGAGVDRIEESDT-------------TAGNTD 1219
Query: 343 RLRFADQCIDSVNVKQRSILEYTASY 368
+RFAD ++ +R + Y
Sbjct: 1220 VVRFADVASTALTALERKDSDLVIKY 1245
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N G + + + + +I GNDV+IG N+ G+D+ DG +G D
Sbjct: 619 NEHYLPGTLGSDLLVGTSGNDLIRGGGNGEGNDVLIGKGGNDELSGGLGDDILDGGTGND 678
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + Y+ + D++ + + +RFAD ++ +R +
Sbjct: 679 VLYGGTGNDTYRFAIGAGVDRIEDSDS----TPGNTDVVRFADVASTALTALERKDNDLV 734
Query: 366 ASY 368
Y
Sbjct: 735 IKY 737
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 61/226 (26%), Gaps = 55/226 (24%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNT 247
+YG GN+ Y+ + + G D++ + DL
Sbjct: 680 LYG----GTGNDTYRFAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVI 735
Query: 248 E---------------SWSSI-------------------------GGYEKNMTIAQHTV 267
+ +S G N I
Sbjct: 736 KYGTGDQLTISSYFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYKDG 795
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA--- 324
+ G GND + G + ++ +GND+ G G DT + + +
Sbjct: 796 SNRIYGLDGNDEIYGGALADILDGGAGNDMLSGGGGADTLDGGSGNDTLNGGTGNDTYRF 855
Query: 325 --IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ D E + + +RFAD ++ +R + Y
Sbjct: 856 AIGVGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKY 901
>gi|329850002|ref|ZP_08264848.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841913|gb|EGF91483.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 2058
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 71/202 (35%), Gaps = 16/202 (7%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ + T+Y GDD + +G + T + + N ++A + IE++
Sbjct: 1738 TGNDGVNTLYGGAGDDTFYVQTVGDAVSE---ATGEGNDLVVASVNFSLA-GSQIENLTL 1793
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ GN N ++GN++ DG +G+D+ A Y + ++ A E
Sbjct: 1794 TGSALNGTGNGLANTLTGNAGNNLLDGGTGVDSLIGGAGDDTY-VVNTTGDVVTEIAAEG 1852
Query: 334 KQDFLSD--------VERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDV--FES 382
LS VE L + +IL + L + G D ++
Sbjct: 1853 SDTVLSSATFTLSNEVEHLTLTGTGNTKATGNALGNILTGNSGNNTLTGLGGNDTYYVQN 1912
Query: 383 MKHFYEFGLSEGRDITFDSYLY 404
EG DI F + Y
Sbjct: 1913 TADNVVEASGEGTDIIFSTVSY 1934
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 16/213 (7%)
Query: 199 KGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-------GVKNYIDLNTE 248
G+ G ++ + T+ G+D + G G + L+
Sbjct: 1566 TGTTGADLLEGFGGADYLLGGTGNDTMIGGLGNDTFTVDSSGDVVIEASGQGSDAILSAI 1625
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++S G Y +++++ I + G+ + + GN+ NN+ SG D G +G DT+
Sbjct: 1626 TYSLYGQYIESLSLTGTADI-NATGNGFGNAITGNAGNNLIDGGSGADTMTGGAGNDTYV 1684
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTAS 367
A S + E V + + +E L + L
Sbjct: 1685 VGATSDVVIEAASEGTDTVRSSVTWTLG--AHLEALILTGTAAIKGYGNALANALTGNDG 1742
Query: 368 YEDLIQVIGQDVF--ESMKHFYEFGLSEGRDIT 398
L G D F +++ EG D+
Sbjct: 1743 VNTLYGGAGDDTFYVQTVGDAVSEATGEGNDLV 1775
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 11/139 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G++G D++ G + +GND G G DTF + + + + +
Sbjct: 1563 EVLTGTTGADLLEGFGGADYLLGGTGNDTMIGGLGNDTFTVDSSGDVVIEASGQGSDAIL 1622
Query: 329 DANEHK-------QDFLSDVERLRFADQCIDS--VNVKQRSILEYTASYEDLIQVIGQD- 378
A + L+ + + ++++ + + + G D
Sbjct: 1623 SAITYSLYGQYIESLSLTGTADINATGNGFGNAITGNAGNNLIDGGSGADTMTGGAGNDT 1682
Query: 379 -VFESMKHFYEFGLSEGRD 396
V + SEG D
Sbjct: 1683 YVVGATSDVVIEAASEGTD 1701
>gi|325144028|gb|EGC66338.1| iron-regulated protein FrpA [Neisseria meningitidis M01-240013]
Length = 1505
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1029 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1086
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1087 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LNGGEGNDALYGYNGND 1142
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1143 VLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKD 1202
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1203 IIRFTDGITAD 1213
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 76/229 (33%), Gaps = 36/229 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 826 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 883
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 884 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 921
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 922 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGK 981
Query: 330 A-NEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
+ QD + + + +RF D + R +D
Sbjct: 982 GFGQDTQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1030
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1229 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1286
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1287 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1324
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1325 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1382
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1383 GKGFGQDTVYN 1393
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1289 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGE 1348
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1349 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1408
Query: 390 GLS 392
+
Sbjct: 1409 KAA 1411
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 733 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 792
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 793 YATGRKDIIRFTDGITAD 810
>gi|114766697|ref|ZP_01445636.1| hypothetical protein 1100011001297_R2601_11699 [Pelagibaca
bermudensis HTCC2601]
gi|114541087|gb|EAU44142.1| hypothetical protein R2601_11699 [Roseovarius sp. HTCC2601]
Length = 868
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 10/153 (6%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A + G G + Y D + I S G D++D ID
Sbjct: 55 AESYVIGDNSVGAGADAY--LGAPGDFGLFEVITGSAGRDVIDG---NDESELIDGGAGD 109
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S I GY + + +++ G GND V GN ++V + + G+D G G D+ +
Sbjct: 110 DS-ILGYGGDDALTGGLGADTLRGGGGNDTVSGNDGDDVIYGNEGDDSLLGGDGADSIYG 168
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
Y A + +D L +
Sbjct: 169 EYGDD----YVEGGAGDDHLEGNEGKDTLIGGD 197
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 15/156 (9%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK---DSPFIQ 220
SY + +S+ + Y P ++ GS G ++ + +
Sbjct: 57 SYVIGDNSVGAGADAYLGAPGDF------GLFEVITGSAGRDVIDGNDESELIDGGAGDD 110
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDV 279
+I GGDD L L L + + G + + I + +S++G G D
Sbjct: 111 SILGYGGDDALTGGLGADT-----LRGGGGNDTVSGNDGDDVIYGNEGDDSLLGGDGADS 165
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ G ++ +G+D +G+ G DT
Sbjct: 166 IYGEYGDDYVEGGAGDDHLEGNEGKDTLIGGDGDDW 201
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 53/170 (31%), Gaps = 26/170 (15%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV----------------IESVV 272
++LD + + G ++ SI ++ I ++V E +
Sbjct: 27 NMLDFSALPGSFTISFARDGAFLSISDGAESYVIGDNSVGAGADAYLGAPGDFGLFEVIT 86
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+G DV+ GN + + +G+D G G D + + +
Sbjct: 87 GSAGRDVIDGNDESELIDGGAGDDSILGYGGDDALTGGLGADTLR----GGGGNDTVSGN 142
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + E D + + EY Y + G D E
Sbjct: 143 DGDDVIYGNE----GDDSLLGGDGADSIYGEYGDDY--VEGGAGDDHLEG 186
>gi|218532949|ref|YP_002423765.1| hypothetical protein Mchl_5072 [Methylobacterium chloromethanicum
CM4]
gi|218525252|gb|ACK85837.1| hypothetical protein Mchl_5072 [Methylobacterium chloromethanicum
CM4]
Length = 223
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 63/210 (30%), Gaps = 38/210 (18%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD LYL D+ + H+ G +EGR P+ F L Y + +
Sbjct: 34 FDESLYLFEAPDVMR----EEAEPIEHFCRFGWREGRRPNLYFDPLWYRDRY---LEGAD 86
Query: 458 DAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
P + H+ G G FD + Y +Y A HY+ H
Sbjct: 87 RNPLV------HYLTIGESAGCRPVCYFDPHWYARTYRLPSRA------NALAHYLAHRR 134
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE--GRSITFNPDLY 572
+ P+ F Y+ + I D H FG S F+ Y
Sbjct: 135 SQRFAPNPDFDLAFYLDRYGVEIGPNRDP-------FAHHLRFGAARDIDPSPHFDAGHY 187
Query: 573 LTSY-DDL-----WNVFGSDRSAAAQHYIT 596
S DL +D HY+
Sbjct: 188 RKSTMTDLTPETRTPWAAADLRVPLVHYLD 217
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 62/220 (28%), Gaps = 25/220 (11%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
+ Y D++ ++ E ++HF FG EGR FD Y
Sbjct: 24 ERRLIAGSGLFDESLYLFEAPDVM----REEAEPIEHFCRFGWREGRRPNLYFDPLWYRD 79
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLINAFADAPDLVQV 465
Y + G+DR HY+T G G R F Y ++
Sbjct: 80 RYLE-----GADRN-PLVHYLTIGESAGCRPVCYFDPHWYARTY---------RLPSRAN 124
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-F 524
H+ + + L Y D V H++ G +P F
Sbjct: 125 ALAHYLAHRRSQ--RFAPNPDFDLAFYLDRYGVEIGPNRDPFAHHLRFGAARDIDPSPHF 182
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
A Y S + P + ++ + R
Sbjct: 183 DAGHYRKSTMTDLTPETRTPWAAADLRVPLVHYLDTQYRR 222
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 60/186 (32%), Gaps = 36/186 (19%)
Query: 432 KEGR---NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSY 486
+E R F Y+ D++ A+ +HF FG EGR FD
Sbjct: 23 RERRLIAGSGLFDESLYLFEAPDVMREEAEP-------IEHFCRFGWREGRRPNLYFDPL 75
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLINAFADAPD 545
Y Y + G+DR HY+T G G R F Y ++ A
Sbjct: 76 WYRDRYLE-----GADRNPLV-HYLTIGESAGCRPVCYFDPHWYARTYRLPSRA------ 123
Query: 546 LVQAGKDHFSNFGYEEGRSITF--NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
H+ RS F NPD L Y D + V H++ G R
Sbjct: 124 ---NALAHYLAH----RRSQRFAPNPDFDLAFYLDRYGVEIGPNRDPFAHHLRFGAA--R 174
Query: 604 ALGISG 609
+ S
Sbjct: 175 DIDPSP 180
>gi|110678852|ref|YP_681859.1| iron-regulated protein FrpC, putative [Roseobacter denitrificans
OCh 114]
gi|109454968|gb|ABG31173.1| iron-regulated protein FrpC, putative [Roseobacter denitrificans
OCh 114]
Length = 1138
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+D G G D +D T + + IDL+ W+ G I +E+V+ S G+DVV
Sbjct: 581 FDGGAGTDTVDFTGVN-LDTTIDLDAGIWNFTGFAPNFDMID----VENVILSGGDDVVT 635
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G+SA NV GND DG +G DT F A + F A V+ + S
Sbjct: 636 GSSAANVITTGGGNDTIDGGAGDDTIFAGAGNDTVFNANFSGANTVFGGDGDDTITSSGE 695
Query: 342 ERL 344
+ +
Sbjct: 696 DTV 698
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 64/206 (31%), Gaps = 22/206 (10%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G G GN+ + + + + G D LDLT G + I+L T + G
Sbjct: 435 FGEYLGGAGNDTIRAGAGTNGTGRSELLDGGVGTDTLDLTGQAGAYD-INLATGVTTFNG 493
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS------------------GND 296
+ E+V SG++ ++G S NV + GND
Sbjct: 494 AVVTEESFIN---FENVNTGSGDNTIVGTSGANVIDGGAGNDDINGGGGNDTIFGGDGND 550
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
V DG G D F A L + + + V D N
Sbjct: 551 VIDGGFGTDDVFGGAGDDLLLLVSGAGSDNFDGGAGTDTVDFTGVNLDTTIDLDAGIWNF 610
Query: 357 KQRSILEYTASYEDLIQVIGQDVFES 382
+ E++I G DV
Sbjct: 611 TGFAPNFDMIDVENVILSGGDDVVTG 636
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)
Query: 225 SGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
GG+D + D L GG+ N I + G + N + + + G G+D+
Sbjct: 778 GGGNDRILGFDGDDDLFGGLGNDILNGGNGNDDLEGGDGNDIMYGGAGNDEMEGGDGDDL 837
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+IGN N+ GND+F G +G+ N I+ D +
Sbjct: 838 LIGNDGNDRMEGGLGNDMFRGGTGV-DIIDGDEGDDEAFGGDGNDILRGGDGNDLMDGSA 896
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++ + V IL+ ++L G DV
Sbjct: 897 GDDSIQGGEGDDILVGQIGSDILQGDNGADELRGGGGNDVLNG 939
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 54/154 (35%), Gaps = 9/154 (5%)
Query: 236 IGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
GG N I L + + G + +I + +VG G+D++ G++ + G
Sbjct: 875 FGGDGNDI-LRGGDGNDLMDGSAGDDSIQGGEGDDILVGQIGSDILQGDNGADELRGGGG 933
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCI 351
NDV +G +G DT F A F + + D L S +RL D
Sbjct: 934 NDVLNGGTGNDTLFGGANEDTL----FGGTGDDFLQGNQQDDDLFGQSGNDRLFGGDGFD 989
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
LE + L+ G D+
Sbjct: 990 FLDGGIGDDRLEGNNGRDTLVGGTGADILIGGAL 1023
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 1/130 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + G GND++ G + N+ GND+ G +G D
Sbjct: 775 MTGGGGNDRILGFDGDDDLFGGLGNDILNGGNGNDDLEGGDGNDIMYGGAGNDEMEGGDG 834
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
L I N + + V+ + + ++ IL + +
Sbjct: 835 DDLL-IGNDGNDRMEGGLGNDMFRGGTGVDIIDGDEGDDEAFGGDGNDILRGGDGNDLMD 893
Query: 373 QVIGQDVFES 382
G D +
Sbjct: 894 GSAGDDSIQG 903
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 49/160 (30%), Gaps = 6/160 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T++ +D L GG + + + G N +
Sbjct: 932 GGNDVLNGGTGNDTLFGGANEDTL----FGGTGDDFLQGNQQDDDLFGQSGNDRLFGGDG 987
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G G+D + GN+ + +G D+ G + DTF + + + + I+
Sbjct: 988 FDFLDGGIGDDRLEGNNGRDTLVGGTGADILIGGALGDTFRFNSVAD--SNLASRDTIVG 1045
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
D + DV + + + ++
Sbjct: 1046 IDGIGVANGDVIDVSAIDADTTVGGNQAFTFLGLQTTASA 1085
Score = 41.3 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 63/185 (34%), Gaps = 23/185 (12%)
Query: 219 IQTIYDSGGDDLLDLT------LIGGVKNYIDLNTESWSSIGGYEKNMTI-AQHTVIESV 271
++ + SGGDD++ + GG + ID + G + A + +V
Sbjct: 622 VENVILSGGDDVVTGSSAANVITTGGGNDTIDGGAGDDTIFAGAGNDTVFNANFSGANTV 681
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVF----------DGSSGLDTFFYYAPSYLYKIYRF 321
G G+D + +S + F +G+D DG G DT + Y +
Sbjct: 682 FGGDGDDTIT-SSGEDTVFGEAGDDTIFAGLGVLENLDGGDGEDTLNTTLFNGAYVVNLA 740
Query: 322 EN----AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
A V+ E+ E A + + IL + +DL +G
Sbjct: 741 TGLTNFAGEVFTNFENIISGNGSDELFGTAGENEMTGGGGNDRILGFDGD-DDLFGGLGN 799
Query: 378 DVFES 382
D+
Sbjct: 800 DILNG 804
>gi|332208831|ref|XP_003253514.1| PREDICTED: LOW QUALITY PROTEIN: neutrophil collagenase-like
[Nomascus leucogenys]
Length = 517
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 50/194 (25%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + ++ T D+ + A WS LTF S +DI
Sbjct: 158 WEQTHLTHRIRNYTPQLSKADV-------ERAIEKAFKVWSDASPLTFTRISQGEADINI 210
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+N P + +FD + W L A HE
Sbjct: 211 AFFQRDHGDNSPFDGPNGILAHAFRXGQGIGGDAHFDAEETWT-KTSTNYNLFLVAAHEF 269
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YP Y F + D
Sbjct: 270 GHSLGLAHSSDPGALMYPNYA-----------------FRETSTYSLPQ---------DD 303
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG
Sbjct: 304 IDGIQAIYGPSSNP 317
>gi|148692667|gb|EDL24614.1| matrix metallopeptidase 19, isoform CRA_b [Mus musculus]
Length = 508
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 62/189 (32%), Gaps = 47/189 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEETSIH-SD 78
+W + ++ + + L+ P + A WS V LTF E +D
Sbjct: 84 GHWRKKNLTFRIFNVP--------STLSLPRVRAALHQAFKYWSSVAPLTFREVKAGWAD 135
Query: 79 IKFIS-SNNGYVCTPRYDSRY----------FMEINFDKADVWRYGIGKGTILSHNALHE 127
I+ C+ +D I+FDK ++W G +G L A HE
Sbjct: 136 IRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRIIAAHE 195
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GHALGL H Y + + A + D
Sbjct: 196 VGHALGLGHSR--------------------------YTQALMAPVYAGYQPFFKLHPDD 229
Query: 188 IVAVQKIYG 196
+ +Q +YG
Sbjct: 230 VAGIQALYG 238
>gi|289678438|ref|ZP_06499328.1| glycosyl transferase, group 1 [Pseudomonas syringae pv. syringae
FF5]
Length = 774
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 72/244 (29%), Gaps = 58/244 (23%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
+FD Y G HY+ G K G P F Y +++D+
Sbjct: 24 SFDKKYYTYQ----LKNAGKKTKNPIEHYLLEGCKTGLEPHPCFVTNFYFENNKDV---- 75
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYIT-H 513
++ HF +G +E RF F Y + ++ +H+ +
Sbjct: 76 ---QEVNAHPFIHFVMYGYKENRFTREGFSLSHYREQHPEIEKTG----INPFKHFTKKY 128
Query: 514 GVKEG---------------------RNPD-------AFKALEYIASHEDLINAFADAPD 545
G E R F + Y + N+ D
Sbjct: 129 GQHEPASNVVAPPPVIKSQHLSESDIRTLSEQAIELGLFDSQWYSERYGKQFNSSED--- 185
Query: 546 LVQAGKDHFSNFGYEE-GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
A D+ + S F+ + Y D+++ + + HY+ G +EGR
Sbjct: 186 ---AFADYLDKSRFSPVNPSNYFDTETYHRMNTDVYHA----QISPLYHYLISGRQEGRT 238
Query: 605 LGIS 608
+
Sbjct: 239 YHAN 242
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/310 (16%), Positives = 92/310 (29%), Gaps = 61/310 (19%)
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
Y ++ G+ ++H+ G G + F + Y + D++ V H
Sbjct: 30 YTYQLKNAGKKTKNPIEHYLLEGCKTGLEPHPCFVTNFYFENNKDVQEVNAH----PFIH 85
Query: 426 YITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF-SNFGCEEG----- 478
++ +G KE R + F Y H ++ + HF +G E
Sbjct: 86 FVMYGYKENRFTREGFSLSHYREQHPEIEKTGINP-------FKHFTKKYGQHEPASNVV 138
Query: 479 ----------------RFVT--------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
R ++ FDS Y Y F S A A +
Sbjct: 139 APPPVIKSQHLSESDIRTLSEQAIELGLFDSQWYSERYG---KQFNSSEDAFADYLDKSR 195
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN-----P 569
+ F Y + D+ +A H+ G +EGR+ N P
Sbjct: 196 FSPVNPSNYFDTETYHRMNTDVYHAQISP-------LYHYLISGRQEGRTYHANIKKWQP 248
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS--GMQFKSVMNLSEKSRDKAD 627
+ L L A H E + ++ Q + L++ K
Sbjct: 249 NSVLDIQATLKPEAARLNVAVCLHIFYEDYIEKFSHALANFPTQVDVFITLADAKHQKKT 308
Query: 628 LSLSFDHKKV 637
+++ H +V
Sbjct: 309 IAVFSKHPRV 318
>gi|256830193|ref|YP_003158921.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256579369|gb|ACU90505.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 1884
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 67/200 (33%), Gaps = 15/200 (7%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTESWS 251
+YG + + + GG D D + ++LN +
Sbjct: 1214 LYGGNES-WNDTLDGGAGNDILVGGAGADVLDGGTETDTADYS-ASDAAVQVNLNLTTAQ 1271
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + ++ T IE++ GS+ NDV+ G+ NV + GND G +G D A
Sbjct: 1272 TGGHAKGDVL----TGIENLTGSNHNDVLTGDGRANVLYGGDGNDQLIGGAGADLLNGGA 1327
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-------DFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ A+ + Q D L +ER+ ++ + L
Sbjct: 1328 GNDTADYSTSSAAVNIDLRRTGAQSGGDAQGDTLVGIERVIGSNHNDTIIGSNGTDYLYG 1387
Query: 365 TASYEDLIQVIGQDVFESMK 384
+D+ G D +
Sbjct: 1388 MDGNDDVRAAYGDDTLDGGA 1407
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 60/189 (31%), Gaps = 17/189 (8%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY--------IDL 245
+YG + T+ G DLLD +Y ID+
Sbjct: 998 LYGGNES--------WNDTLDGGAGNDTLVGGAGSDLLDGGTETDTADYSASSTWVNIDM 1049
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N + + GG + IE+V GS +D + GN NNV G D+ DG +G D
Sbjct: 1050 NLATEQTGGGDGNHALGDTLVSIENVTGSQYDDSITGNGWNNVLDGGDGADILDGGAGRD 1109
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEY 364
A + ++ ++ N+ + + L D L
Sbjct: 1110 NLNGGAGNDSLDGGAGDDFLLGGAGNDSLYGGERNFSDTLDGGDGYDTLDGGTGDDSLLG 1169
Query: 365 TASYEDLIQ 373
A + L
Sbjct: 1170 GAGNDSLYG 1178
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 46/140 (32%), Gaps = 5/140 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ +Y GG D D + N ID+N + + GG +
Sbjct: 1427 DDKLYGQGNNDTLVGGAGADLLDGGTETDTADYSASSTWVN-IDMNLATAQTGGGDGNHA 1485
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
IE+V GS +D + GN NNV G D G G DT A + +Y
Sbjct: 1486 LGDTLVSIENVTGSQYDDSITGNGWNNVLDGGDGADTLYGGGGHDTLNGGAGND--SLYG 1543
Query: 321 FENAIIVYDANEHKQDFLSD 340
A + D L
Sbjct: 1544 GVEAQYDHLDGGSGNDTLDG 1563
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 65/177 (36%), Gaps = 14/177 (7%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE--SVV 272
+Y GDDL+ + TL GG N L+ S+ G N + T ++
Sbjct: 270 DILYGGDGDDLMSGYAGNDTLYGGAGNDFLLSGGGNDSLSGGAGNDILGGSTASGDCTLD 329
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI------- 325
G GND + G + GND+ G G+DT A + + A+
Sbjct: 330 GGDGNDTMSGGVGKILLLGGDGNDLLYGWVGVDTLDGGAGIDTADYFCSDAAVRVDLNLT 389
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + D L+ +E L +D + Q ++L + + L+ G +
Sbjct: 390 TAQSGGDAEGDLLTGIENLTGSDFNDTLIGNGQNNVLSGLSGNDSLVGGSGNNSLSG 446
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 3/114 (2%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSIGGYEKNMT 261
+++Y GG + D ++++N + S + GG + N
Sbjct: 799 DDSLYGASNNDTLVGGAGADLLDGGTET-DTADYSASSTWVNVNLSLSTAQTGGGDGNHA 857
Query: 262 IAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ V IE+V GS +D + GN NNV G D DG G DT A +
Sbjct: 858 LGDTLVSIENVTGSQYDDSITGNGWNNVLDGGDGADNLDGGGGRDTLDGGAGND 911
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 16/148 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + +++ G +G D + G + N+ G+D G DT A
Sbjct: 632 LYGMDGNDDVRAAYGNDTLDGGAGADTLWGATGTNLLLGGDGDDKLYGQGNNDTLAGGAG 691
Query: 313 SY--------LYKIYRFENAIIVYDANEHKQ--------DFLSDVERLRFADQCIDSVNV 356
+ Y +A + D D L +ER+ ++ +
Sbjct: 692 ADLLDGGTETDTADYSASSAAVNIDLRRAGTQSGGDAQGDTLVSIERVIGSNHNDTIIGS 751
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMK 384
L +D+ G D +
Sbjct: 752 NGTDYLYGMDGNDDVRAAYGDDTLDGGA 779
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 67/211 (31%), Gaps = 42/211 (19%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ T+ G D D +DLN + S G E ++ T IE++ GS N
Sbjct: 360 GVDTLDGGAGIDTADY-FCSDAAVRVDLNLTTAQSGGDAEGDLL----TGIENLTGSDFN 414
Query: 278 DVVIGNSANNVFFESSGND---------------------------VFDGSSGLDTFFYY 310
D +IGN NNV SGND DG +G+DT Y
Sbjct: 415 DTLIGNGQNNVLSGLSGNDSLVGGSGNNSLSGGDGDDILRGGVHGDTLDGGAGVDTVSYE 474
Query: 311 APSYLYKIYRFENAIIVYDA--------NEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + N+ K D L+ +E L ++ ++L
Sbjct: 475 SSGLGVDVDLNRQGGGQTQPGVGGPGLLNDAKDDVLTGIENLTGSNYGDKLTGDGNDNVL 534
Query: 363 EYTASYEDLIQVIGQDVFESMK--HFYEFGL 391
+ + L G D F G
Sbjct: 535 SGLNAADTLYGGGGDDSLYGGAGFDFLMGGA 565
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N +Y + + +GG +D D + N IDL S G + +
Sbjct: 1301 RANVLYGGDGNDQLIGGAGADLLNGGAGNDTADYSTSSAAVN-IDLRRTGAQSGGDAQGD 1359
Query: 260 MTIAQHTVI-----ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ VI ++++GS+G D + G N+ + G+D DG +G D+ +
Sbjct: 1360 TLVGIERVIGSNHNDTIIGSNGTDYLYGMDGNDDVRAAYGDDTLDGGAGNDSLWGAKD 1417
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 4/130 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D + G +DL + G ++ I IE+VVGS +D + G N+
Sbjct: 125 VDYSTRGFWGVTVDLGLGTAKINYGIGDDVLIG----IENVVGSIFHDSLTGADVANMLD 180
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
G+D G G DT + ++++ D + + L D
Sbjct: 181 GGGGHDTLRGLGGDDTLHGGSDDDSLDGGDGDDSLDGGDGEDTMHGGAGGNDSLYGGDGA 240
Query: 351 IDSVNVKQRS 360
Sbjct: 241 FSDYMEGGDG 250
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 15/191 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSS-I 253
G S+ N + D G G D+LD G +LN + + +
Sbjct: 1066 GDTLVSIENVTGSQYDDSITGNGWNNVLDGGDGADILD-----GGAGRDNLNGGAGNDSL 1120
Query: 254 GGYEKNMTIAQHTVIESVVGSSGN--DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + + +S+ G N D + G + +G+D G +G D+ +
Sbjct: 1121 DGGAGDDFLLGGAGNDSLYGGERNFSDTLDGGDGYDTLDGGTGDDSLLGGAGNDSLYGG- 1179
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + D L + + N L+ A + L
Sbjct: 1180 -DWNFADTLDGGDGDDTLNGGEAYDSLLG----GAGNDFLYGGNESWNDTLDGGAGNDIL 1234
Query: 372 IQVIGQDVFES 382
+ G DV +
Sbjct: 1235 VGGAGADVLDG 1245
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDAN 331
ND + G + N+ +GNDV G G+D+ F A + + + + + +
Sbjct: 1701 NDTLDGGAGNDTLDGGAGNDVLYGGGGIDSLFGDAGNDILHLNPATTGLLDGSGTILPTH 1760
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + + L V + +++
Sbjct: 1761 IGMLDGGAGTDTLVLDGHDGSGVTLDLSALVT 1792
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 15/146 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+Y GG D L+ G + + + G N T+
Sbjct: 1509 GWNNVLDGGDGADTLYGGGGHDTLN--GGAGNDSLYGGVEAQYDHLDGGSGNDTLDGGAG 1566
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGN-----------DVFDGSSGLDTFFYYAPSYLY 316
+ ++G +GND + G N V G+ D G +G D+ + +Y
Sbjct: 1567 NDFLLGGAGNDSLYGGDWNFVDTLDGGDGDDTLDGGEGRDSLLGGAGNDSLYGGFEAYSD 1626
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVE 342
+Y A + DFL +
Sbjct: 1627 HLYGGSGADTLDGGA--GYDFLLGGD 1650
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 2/137 (1%)
Query: 247 TESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++S G + + T+ + + G GND++ G +++ +GND G +G D
Sbjct: 238 DGAFSDYMEGGDGDDTLEGGDGGDYMDGGYGNDILYGGDGDDLMSGYAGNDTLYGGAGND 297
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ + + A+ D + + I + +L
Sbjct: 298 FLLSGGGNDSLSGGAGNDILGGSTASGDCTLDGGDGNDTMSGGVGKILLLGGDGNDLLYG 357
Query: 365 TASYEDLIQVIGQDVFE 381
+ L G D +
Sbjct: 358 WVGVDTLDGGAGIDTAD 374
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 46/147 (31%), Gaps = 21/147 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG----NDVFDGSSGLDTFF 308
G ++ T+ +++ G SG+D + G + N++ G D G G DT
Sbjct: 49 FHGTYQSDTLFGGMGADTLYGGSGHDTLYGGAGNDLLNGGIGFYYDRDALHGGDGDDTLV 108
Query: 309 YYAPSY-----------LYKIYRFENAIIVYDANEH------KQDFLSDVERLRFADQCI 351
+A Y F + D L +E + +
Sbjct: 109 SWAGGDTLDGGDGIDMVDYSTRGFWGVTVDLGLGTAKINYGIGDDVLIGIENVVGSIFHD 168
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQD 378
++L+ ++ L + G D
Sbjct: 169 SLTGADVANMLDGGGGHDTLRGLGGDD 195
>gi|157130905|ref|XP_001662056.1| matrix metalloproteinase [Aedes aegypti]
gi|108881898|gb|EAT46123.1| matrix metalloproteinase [Aedes aegypti]
Length = 377
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 63/193 (32%), Gaps = 48/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
WS + Y + + R A WS+V +L F E + +++
Sbjct: 4 WSKSLLTYAIVNYPRGMPEGTV-------RSTIRTAFDAWSRVTNLDFVERASSAEVDIQ 56
Query: 83 SSNNGYVCTPRYDSRYF--------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ G R + +I+F+ + + L + A+HEI
Sbjct: 57 VAFEGMNHYRRGVPCQYNHENTLAHAFFPELGDIHFNTLHFFNGETSREEFL-NTAVHEI 115
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL+H S +S+M Y S P DI
Sbjct: 116 GHSLGLLHSAS-------------------RSSIM-Y------GAQLSSNLLVEPQPEDI 149
Query: 189 VAVQKIYGAPKGS 201
A+Q IYG G
Sbjct: 150 EAIQAIYGVRSGP 162
>gi|85706410|ref|ZP_01037504.1| putative RTX toxin [Roseovarius sp. 217]
gi|85669183|gb|EAQ24050.1| putative RTX toxin [Roseovarius sp. 217]
Length = 1655
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 17/179 (9%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGV--------KNYIDLNTE 248
+ I+ + +I+ GDD++ D ++ GG+ LN
Sbjct: 1460 DTIFGASGNDTIGGGVGVDSIHAGSGDDVIAAGGGDDSVNGGIGHDTILGGDGQDALNGG 1519
Query: 249 SWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I G + +I + + G G+D++ G AN+ +G D G G D
Sbjct: 1520 AGRDNIDGGAGDDSIDGGLGTDLLQGGLGDDLLFGGGANDTLDGGAGADTLRGGEGNDVL 1579
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ ++ + A V D + D L L F+D I +
Sbjct: 1580 TGGFGADVFVFASSDGADTVSD-FQDGVDLLVFEGGLGFSDLTITDTGEGAVITGTGGS 1637
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 14/153 (9%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + T+ +++ G SGND+V+G N+ SG+D +G SG DT
Sbjct: 1327 FNGLAGDDTMLGGNGDDTLGGGSGNDMVLGEDGNDSLGGGSGSDTLNGGSGNDTLGGGLD 1386
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + + D + E L + +
Sbjct: 1387 DD----FLAGGSGDDVLSADTGNDVIGGGE------GDDVLRGGSGNDSLYGGDGNDGVA 1436
Query: 373 QVIGQDVFESMK--HFYEFGLSEGRDITFDSYL 403
G D+ + + G G D F +
Sbjct: 1437 GGQGDDLLKGGAGDDWIAGGA--GADTIFGASG 1467
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 9/119 (7%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
GDD + D TL GG N + L + S+GG + T+ + +++ G +D +
Sbjct: 1332 GDDTMLGGNGDDTLGGGSGNDMVLGEDGNDSLGGGSGSDTLNGGSGNDTLGGGLDDDFLA 1391
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G S ++V +GNDV G G D + + + + A D L
Sbjct: 1392 GGSGDDVLSADTGNDVIGGGEGDDVLRGGSGNDSLYGGDGNDGV----AGGQGDDLLKG 1446
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 11/183 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGD-------DLLDLTLIGGVKNYIDLNTESWSS-IGG 255
+ + + + +GG D + + GG + + L S + + G
Sbjct: 1370 DTLNGGSGNDTLGGGLDDDFLAGGSGDDVLSADTGNDVIGGGEGDDV-LRGGSGNDSLYG 1428
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N +A + + G +G+D + G + + F +SGND G G+D+ +A S
Sbjct: 1429 GDGNDGVAGGQGDDLLKGGAGDDWIAGGAGADTIFGASGNDTIGGGVGVDSI--HAGSGD 1486
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I V H D + D+++ DL+Q
Sbjct: 1487 DVIAAGGGDDSVNGGIGHDTILGGDGQDALNGGAGRDNIDGGAGDDSIDGGLGTDLLQGG 1546
Query: 376 GQD 378
D
Sbjct: 1547 LGD 1549
>gi|60207666|gb|AAX14807.1| matrix metalloproteinase 3/10b [Notophthalmus viridescens]
Length = 469
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 60/190 (31%), Gaps = 49/190 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---SIHSDI 79
W + + Y+ T D+ + A WS V LTF + I
Sbjct: 107 WRTHALTYRILNYTPDMARADV-------DTAIQKAFKVWSDVTPLTFTRIYYGTADIQI 159
Query: 80 KFISSNNG----YVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHEI 128
F + +G + + F + +FD+ + W G GT L A HE
Sbjct: 160 SFAAREHGDFSPFDGPHGTLAHAFAPSTGIGGDAHFDEDERWTKGSA-GTNLFLVAAHEF 218
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y SY P + D
Sbjct: 219 GHSLGLSHSNDRRALMFPTY----------------SYTDPARYQLP----------KDD 252
Query: 188 IVAVQKIYGA 197
I +Q +YG
Sbjct: 253 INGIQALYGP 262
>gi|297690067|ref|XP_002822447.1| PREDICTED: interstitial collagenase-like isoform 2 [Pongo abelii]
Length = 403
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 28 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 80
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 81 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 140
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 141 F-REYNLYRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 172
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 173 SYTFSGDVQLAQDDIDGIQAIYGPSQNP 200
>gi|148227598|ref|NP_001088503.1| matrix metallopeptidase 8 (neutrophil collagenase) [Xenopus laevis]
gi|54311407|gb|AAH84836.1| LOC495372 protein [Xenopus laevis]
Length = 466
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 63/215 (29%), Gaps = 49/215 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T ++ + A WS V LTF + +DI+
Sbjct: 108 WKKKDLTYRILNYTPDMTREEV-------DRAIQKAFKVWSDVTPLTFTRVNDGVADIEI 160
Query: 82 ISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D Y + +FD+ + W G G L A HE
Sbjct: 161 SFAAQVHNDFYPFDGPYGTLAHAFAPGNNIGGDAHFDEDEDWTSG-SVGFNLFLVAAHEF 219
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H + YP Y Y P + D
Sbjct: 220 GHSLGLFHSNDPSALMYPTYH----------------YVDPSTFQLPQ----------DD 253
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
+ +Q +YGA + + I
Sbjct: 254 VNGIQSLYGARTKPAEPSTPSNPTNCPPNITFDAI 288
>gi|163792383|ref|ZP_02186360.1| hypothetical protein BAL199_16088 [alpha proteobacterium BAL199]
gi|159182088|gb|EDP66597.1| hypothetical protein BAL199_16088 [alpha proteobacterium BAL199]
Length = 909
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 60/184 (32%), Gaps = 16/184 (8%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + ++ T+Y GG D L GGV N + G + N
Sbjct: 205 DTVSGLDGNDLLYGDAGNDTLYGGGGVDTL----YGGVGNDFLYGETGNDLLFGEDGNDG 260
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
++ +++ G +GND +IG+S + + GND G G D + +
Sbjct: 261 MSGGVGDDTLYGGNGNDTLIGSSGADRLYGGDGNDWMWGGRGDDLLYGGNGADTLS---- 316
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ E D +S F+ I + L A + L +G D
Sbjct: 317 GGDGVDSLYGEADDDLISG-----FSGDDILFGGAGNDT-LRGNAQNDTLSGGLGNDALS 370
Query: 382 SMKH 385
Sbjct: 371 GGAD 374
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 23/163 (14%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYI-------DLNTE 248
+ +Y + + ++ GG+D ++ T+ GG + D+
Sbjct: 683 DDTLYGGDGNDTIGSASGNDALFGDGGNDTVNGGTGNDTVWGGTDADVVYGNQDADVVYG 742
Query: 249 SWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + G + N T+ + G+ G+DVV GN N+ + GNDV G +G DT
Sbjct: 743 NQGNDTLFGGQGNDTVFGGRDADLAYGNLGDDVVYGNLGNDTLYGGDGNDVLYGGAGDDT 802
Query: 307 FFYYAPSYLYK-------IYRFENAIIVYDANEHKQDFLSDVE 342
A + ++ I ++ + + D +SD +
Sbjct: 803 MIGGAGNDTFQGGLGNDLISTGAGNDLIAISAGNGADTVSDFD 845
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 1/148 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I + N T++ + + G +GND + G + + GND G +G D F
Sbjct: 197 TISALDGNDTVSGLDGNDLLYGDAGNDTLYGGGGVDTLYGGVGNDFLYGETGNDLLFGED 256
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ + + N+ S +RL D + +L + L
Sbjct: 257 GNDGMSGGVGDDTLYGGNGNDTLIGS-SGADRLYGGDGNDWMWGGRGDDLLYGGNGADTL 315
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITF 399
G D G DI F
Sbjct: 316 SGGDGVDSLYGEADDDLISGFSGDDILF 343
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 5/153 (3%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D ++ I G I + +++ + +++ + +++ G GND + S N+
Sbjct: 646 DNIEFVSIIGSARVIGGSGNNYAVGDDSAQFISLGEGD--DTLYGGDGNDTIGSASGNDA 703
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
F GND +G +G DT + + +Y ++A +VY + F F
Sbjct: 704 LFGDGGNDTVNGGTGNDTVWGG--TDADVVYGNQDADVVYGNQGNDTLFGGQGNDTVFGG 761
Query: 349 QCIDSVNVKQRSILEYT-ASYEDLIQVIGQDVF 380
+ D + Y + L G DV
Sbjct: 762 RDADLAYGNLGDDVVYGNLGNDTLYGGDGNDVL 794
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 54/183 (29%), Gaps = 34/183 (18%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTE 248
+YG S +Y G+D + D L GG +
Sbjct: 270 LYGGNG----------NDTLIGSSGADRLYGGDGNDWMWGGRGDDLLYGGNGADTLSGGD 319
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS------- 301
S+ G + I+ + + + G +GND + GN+ N+ GND G
Sbjct: 320 GVDSLYGEADDDLISGFSGDDILFGGAGNDTLRGNAQNDTLSGGLGNDALSGGADDDVLS 379
Query: 302 -----------SGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQ 349
SG DT + + + + N + D ++ V+
Sbjct: 380 GGGGDDLLYGGSGFDTLVGGSGNDTFTGSASDHNGDTISDFAVGDSIIVTGVDLSSLNGT 439
Query: 350 CID 352
Sbjct: 440 TAS 442
>gi|126355|sp|P16462|LKTA_ACTAC RecName: Full=Leukotoxin; Short=Lkt
gi|141834|gb|AAA21922.1| leukotoxin (LtA) [Aggregatibacter actinomycetemcomitans]
Length = 1050
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 12/140 (8%)
Query: 193 KIYGAPK-----GSLGNN-IYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
K YG+ G G++ IY + + I+ G+D L GG N
Sbjct: 728 KFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKL----YGGAGNDRL 783
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + G E + + + + G SGND + GN +++ G+D G G
Sbjct: 784 FGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGEGDDQLAGGEGN 843
Query: 305 DTFFYYAPSYLYKIYRFENA 324
D + Y + I
Sbjct: 844 DIYVYRKEYGHHTITEHSGD 863
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + G +GND + G NN G+D +G +G D +
Sbjct: 756 LYGDNGNDEIHGGQGNDKLYGGAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSG 815
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ F N D L+ E
Sbjct: 816 NDKL----FGNQGDDLLDGGEGDDQLAGGE 841
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 14/150 (9%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L + G + N H + + G G+D + G++ N+ GND G +G
Sbjct: 724 NLRDK----FYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYGGAG 779
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D F + Y + + D L + +L+
Sbjct: 780 NDRLFGEYGNN----YLDGGEGDDHLEGGNGSDILRG------GSGNDKLFGNQGDDLLD 829
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ L G D++ K + ++E
Sbjct: 830 GGEGDDQLAGGEGNDIYVYRKEYGHHTITE 859
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 15/135 (11%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+L + Y IY GDD L G N I G +
Sbjct: 723 SNLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRL----YGDNGND---------EIHGGQ 769
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + + G GN+ + G ++ +G+D+ G SG D F L
Sbjct: 770 GNDKLYGGAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLD 829
Query: 318 IYRFENAIIVYDANE 332
++ + + N+
Sbjct: 830 GGEGDDQLAGGEGND 844
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 49/147 (33%), Gaps = 14/147 (9%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + GS NDV G+ +++ + G+D G +G D + +
Sbjct: 720 IIGSNLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKL----Y 775
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A E+ ++L E IL + + L G D+ +
Sbjct: 776 GGAGNDRLFGEYGNNYLDGGE------GDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLD 829
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + EG DI Y+Y Y
Sbjct: 830 GGEGDDQLAGGEGNDI----YVYRKEY 852
>gi|254513175|ref|ZP_05125240.1| calcium binding hemolysin protein, putative [Rhodobacteraceae
bacterium KLH11]
gi|221532179|gb|EEE35175.1| calcium binding hemolysin protein, putative [Rhodobacteraceae
bacterium KLH11]
Length = 12584
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 75/226 (33%), Gaps = 37/226 (16%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLD-------LTLIGGVKNYIDLNTE 248
GS + +Y E S TI G+D+L L G +I L+
Sbjct: 9330 NAGSANDTLYGDEGADVISGGAGDDTISGGHGNDVLRGGIGTNTLKGDSGDDLFI-LDQG 9388
Query: 249 SWSSIGGYEKNMT---------------IAQH-------TVIESVVGSSGNDVVIGNSAN 286
S S+ GG + I+ T IE VVGS ND + G++ +
Sbjct: 9389 SDSADGGDGHDTVSYKSATQSVNVQLSGISGGGAVGDTFTSIEGVVGSDFNDTLTGSAED 9448
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N +G D G SG+DT Y + + I + + D + +E L
Sbjct: 9449 NRLEGGNGADTLIGGSGIDTASYLSSAEGVSIDLVTG---LASGGDAAGDTFNSIESLTG 9505
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
+ + LE + L +G D V + G
Sbjct: 9506 SRFADTLKGDTGANRLEGGDGNDTLQGSLGNDTLVGGEGADILQGG 9551
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 72/226 (31%), Gaps = 27/226 (11%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--------SIGGYEKNMTIAQHT 266
T+ GDD + + G +DL + + ++ G N TI +
Sbjct: 9277 TGNGTTTVQAVAGDDHVTASNAGDS---VDLGSGDDTFIGGAGGVTVHGRAGNDTINAGS 9333
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G G DV+ G + ++ GNDV G G +T + L+ + + ++
Sbjct: 9334 ANDTLYGDEGADVISGGAGDDTISGGHGNDVLRGGIGTNTLKGDSGDDLFILDQGSDSAD 9393
Query: 327 VYDANE----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D ++ +V+ + + + + L + E
Sbjct: 9394 GGDGHDTVSYKSATQSVNVQLSGISGGGAVGDTFTSIEGVVGSDFNDTLTGSAEDNRLEG 9453
Query: 383 --MKHFYEFGLSEGRDITFDSYLYLGSYD----DLRNVFGSDRGAA 422
G D+ YL S + DL S AA
Sbjct: 9454 GNGADTLIGGSG------IDTASYLSSAEGVSIDLVTGLASGGDAA 9493
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 67/208 (32%), Gaps = 36/208 (17%)
Query: 196 GAPKGSLGNNIYKIEVQQKDS-----PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+ +L N Y +E + D T++ G D + N
Sbjct: 10598 GSDSITLDGNGYYVEARGGDDFLQGGSGNDTLHGGAGKDTVTYANATSAVNV-------- 10649
Query: 251 SSIGGYEKNMTIAQHTVI--ESVVGSSGNDVVIGNSANNVFF---------ESSGNDVF- 298
+ I T+I E+VVGS D +IGN+ NV G+D
Sbjct: 10650 -DLSNITSGTAIGTDTLIDIENVVGSGFRDTIIGNTEANVLDGGTGGGVLRGEEGDDTLV 10708
Query: 299 --------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
DG GLDT Y + I N D ++VE + +
Sbjct: 10709 ANQSADEFDGGDGLDTVSYKNATAGVSINFETNVHGTSTYRSG--DTYANVEGIVGSKFA 10766
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + L+ + + L+ G+D
Sbjct: 10767 DTLTGDENDNHLDGSDGNDTLVGGFGKD 10794
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 70/201 (34%), Gaps = 25/201 (12%)
Query: 221 TIYDSG-GDDLLDLTLIGGVKN---YIDLNTESW-------------SSIGGYEKNMTIA 263
+ YD G G D +D + + + I LN S S G T+
Sbjct: 10523 SDYDGGSGTDTVDFSNVSLTTDEHLVISLNAGSAEGELQYQIVENQTSDGSGEVGTTTVV 10582
Query: 264 QHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I++V +G+SG+D + + G+D G SG DT A
Sbjct: 10583 DQGTIQNVERLIGTSGSDSITLDGNGYYVEARGGDDFLQGGSGNDTLHGGAGKDTVTYAN 10642
Query: 321 FENAIIVYDANEH-----KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+A+ V +N D L D+E + + + + ++L+ L
Sbjct: 10643 ATSAVNVDLSNITSGTAIGTDTLIDIENVVGSGFRDTIIGNTEANVLDGGTGGGVLRGEE 10702
Query: 376 GQDVFESMKHFYEFGLSEGRD 396
G D + + EF +G D
Sbjct: 10703 GDDTLVANQSADEFDGGDGLD 10723
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 75/396 (18%), Positives = 130/396 (32%), Gaps = 64/396 (16%)
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
Y +D DS SV + DS + + + P + ++V++ KG+ N++
Sbjct: 10065 YSIDAGLGQDSIDLSVWTSGAKIDSG-NGTISLVSGPAIGSFISVEEF----KGTGQNDV 10119
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ Q +T +GG D L IDL + S++ +
Sbjct: 10120 FVAGFQS------ETFDGAGGVDSLSF-ERSLQGVRIDLTSSSFAGGFAERDSYQ----- 10167
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYR 320
+E++ GS+ ND++ G++ N F G+D G G D Y I
Sbjct: 10168 GVENLTGSNFNDILRGDAQANQLFGGLGDDALLGMQGDDHIHGDGGFDEIDGGDGYDILN 10227
Query: 321 FENAII---------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + D +S++E + D D V S+L
Sbjct: 10228 YSQSTQAIQLNFATGAHSGGDAAGDTISNIEAVIGTDS--DDTIVSTSSLLH-------- 10277
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF---GSDRGAAARHYIT 428
D E + H G S G I + L +Y + G + + H T
Sbjct: 10278 -----IDGGEGVDHVSFVGTSNGVSIF--TAPSLANYVGVMGSTYISGVETVIGSDHNDT 10330
Query: 429 HGVK---------EGRNPDAFKALEYIASHEDLINA--FADAPDLVQVGKDHFSNFGCEE 477
V+ G + + DL + D + G +H G E
Sbjct: 10331 FQVRGGVTSLDGGAGVDLLNLSNASAPGASVDLASGVVIIDGFEFNVTGIEHIKGSGLAE 10390
Query: 478 GRFVTF-DSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
+ D Y G+ D R G+D + Y+
Sbjct: 10391 TIVGSAQDELFYAGAGDVFRGGDGNDYVKLSNSYLQ 10426
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D + I ++ + + + + A +I S+ G G+DV+ GN+ +N
Sbjct: 4513 TTDRSGGALSNKAIAVDFRDQTEDQSLDTSSSDAYSDII-SIRGGGGDDVLTGNALDNHL 4571
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
F +GND G +G D+ + +A ++ +
Sbjct: 4572 FGEAGNDTLVGGAGNDSLYGGEGKDSLTGGEGTDAYVIVPGTDGAV 4617
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--Y 328
+ G S +D + GNS ++V GND +G SG D A + Y++ + +V +
Sbjct: 12415 INGGSVSDSLTGNSGDSVIKGLDGNDTLNGGSGNDVLIGGAGNDTYRVNLGDQTTVVDNF 12474
Query: 329 DANEHKQDFLSDVERLRFAD 348
D+ D + + + D
Sbjct: 12475 DSGSSDLDIVVFGDNITQND 12494
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 49/165 (29%), Gaps = 14/165 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ T+ G D L IDL T +S G + IES+ G
Sbjct: 9452 EGGNGADTLIGGSGIDTASY-LSSAEGVSIDLVTG-LASGGDAAGDTF----NSIESLTG 9505
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA--- 330
S D + G++ N GND GS G DT + + + ++ + D
Sbjct: 9506 SRFADTLKGDTGANRLEGGDGNDTLQGSLGNDTLVGGEGADILQGGTGDDHVFADDHDIL 9565
Query: 331 --NEHKQDFLSDVER---LRFADQCIDSVNVKQRSILEYTASYED 370
D + + F+ V+ +
Sbjct: 9566 ADGGDGTDTIDFSNYDRAVDFSLGTTVKVHENAVGGSFGVYTNST 9610
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 6/120 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE++VG+S D +IG+SA+N +GND+ +G++G D + + +
Sbjct: 7648 IENIVGTSLADTLIGDSASNTLSGGAGNDLIEGAAGADKLEGGTGVDTVSYKSSDAGVTI 7707
Query: 328 ------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D +S E + + + + + + G + +
Sbjct: 7708 NLETGAASGGDASGDEISGFENIEGSSFNDHLTGDAGNNTFVASTGNDQIFAGGGTNTVD 7767
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 10/117 (8%)
Query: 248 ESWSSIGGYEKN--MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S S+ N I +++ G +G D +IG +++ +G D+ G G D
Sbjct: 6856 GSLSNDTITSGNHATFIDGGDGKDTLTGGAGADTLIGGRGDDILIGGAGADIIRGGEGDD 6915
Query: 306 TFFYYAPSYLYK--------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
S I + +++ D ++ + F + +
Sbjct: 6916 RLLGGLESDTLDGGSGSDQLIGGGGDDMLLASRGRDDIDGGEGIDTVDFDGVSLSNG 6972
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/345 (16%), Positives = 110/345 (31%), Gaps = 27/345 (7%)
Query: 38 HRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---ETSIHSDIKFISSNNGYVCTPRY 94
+ D+T + R + + F ++ F + + +
Sbjct: 10145 QGVRIDLTSSSFAGGFAERDSYQGVENLTGSNFNDILRGDAQANQLFGGLGDDALLGMQG 10204
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
D + FD+ D G ++ A G H G G + ++
Sbjct: 10205 DDHIHGDGGFDEIDGGD-GYDILNYSQSTQAIQLNFATG-AHSGGDAAGDTISNIEAVIG 10262
Query: 155 NDS--FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY----- 207
DS + S S + T I + A + + Y
Sbjct: 10263 TDSDDTIVSTSSLLHIDGGEGVDHVSFVGTSNGVSIFTAPSL--ANYVGVMGSTYISGVE 10320
Query: 208 -----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + ++ G DLL+L+ +DL + I G+E N+
Sbjct: 10321 TVIGSDHNDTFQVRGGVTSLDGGAGVDLLNLSNASAPGASVDLASGVVI-IDGFEFNV-- 10377
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T IE + GS + ++G++ + +F+ +G DVF G G D +
Sbjct: 10378 ---TGIEHIKGSGLAETIVGSAQDELFYAGAG-DVFRGGDGNDYVKLSNSYLQADVSVAA 10433
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
N I+ D + L+ VE + F+D I+ ++ ++
Sbjct: 10434 NDDILLD-FDGAIITLNSVETIEFSDGFINGDTLRTVYAASGSSG 10477
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 42/137 (30%), Gaps = 7/137 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI + G G D + G + + G+D+ G +G D
Sbjct: 6856 GSLSNDTITSGNHATFIDGGDGKDTLTGGAGADTLIGGRGDDILIGGAGADIIRGGEGDD 6915
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-----TASYE 369
++ + + + Q + + A + D ++ + ++ E
Sbjct: 6916 --RLLGGLESDTLDGGSGSDQLIGGGGDDMLLASRGRDDIDGGEGIDTVDFDGVSLSNGE 6973
Query: 370 DLIQVIGQDVFESMKHF 386
L+ E H+
Sbjct: 6974 RLVVRSDAGSSEGELHY 6990
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 28/154 (18%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGYEKNM 260
+ IY +I G D+L LT G V +DL + +S + ++
Sbjct: 8162 DDTIYADAGDN-------SISGGAGSDVLVLT--GSVGASLDLVSGDLLFSDEVASDVSL 8212
Query: 261 TIAQHTVIESVVGSSGNDVV--------IGNSANNVF--------FESSGNDVFDGSSGL 304
I + IE V GSSG D + GN+ N+ + +G+D S
Sbjct: 8213 -IGRVDGIEIVQGSSGADTISGMAGSTLYGNAGNDRLVGGGQSKLYGGAGDDTLLNGSEG 8271
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
D S Y+I RF + A D +
Sbjct: 8272 DVLAGGEGSDTYRISRFGKVTLSETAKFGDTDTV 8305
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E++VGS +DV +GN ++N +G+D+ S G D + L + V
Sbjct: 8932 VENIVGSIFDDVFVGNGSDNTIDAGAGDDIVYASDGRDILAGGDGNDLISYSNATQGVRV 8991
Query: 328 YDANEHK------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
QD +S E ++ V +I + + + G D+ +
Sbjct: 8992 SLNGGFASKSGTEQDLISGFENIQGGRASDTLVGDSSDNIFLGSDGSDVIYGGEGHDIVD 9051
Query: 382 SMKH 385
Sbjct: 9052 LSAL 9055
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+DL+ + + LN S G + ++ E++ G +D ++G+S
Sbjct: 8974 GDGNDLISYSNAT-QGVRVSLNGGFASKSGTEQDLIS-----GFENIQGGRASDTLVGDS 9027
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++N+F S G+DV G G D A +Y
Sbjct: 9028 SDNIFLGSDGSDVIYGGEGHDIVDLSALEVDTDVY 9062
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 18/171 (10%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI---------AQHTVI------ES 270
G D + ++ + +N + + G + I A I E+
Sbjct: 5704 GASDTIQYFGDASTQSGVIVNLTTGNGYGADAEGDQISNVEAVVGSAYDDRIIGSATDEA 5763
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND + GN +++ G + DG +G D+ Y + + D
Sbjct: 5764 LQGGAGNDDISGNGGDDILDGGRGRNRLDGGAGSDSVSYDSNKNAVYVDLELG---FVDK 5820
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D+L +E + + D + + + G D
Sbjct: 5821 GNGDFDYLYSIENIEGSRFNDDIRGTDASDFFLGSLGQDTIDAKGGADSIN 5871
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 6/183 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +S + + + G L+ + ID + + + Q
Sbjct: 3820 TVDSETRIAGESVSAKVLVEGDGQSTQTLSSTATESSSIDTGESHFDISTSKFQKLESVQ 3879
Query: 265 HTVIESVVGSSGNDV-VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++ + SG D + G + N+ + GNDV G +G D + A + + E+
Sbjct: 3880 GNAADNKLTGSGGDEHLAGLAGNDELRGAGGNDVILGGTGADKLYGGAGNDYIRARIIED 3939
Query: 324 AIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVIGQDVFE 381
A A D L AD I + + S Y+ D +
Sbjct: 3940 AASEGQIATTGGSDLLVGG---SGADSYILAEGTEASSFGVIGHGYDGDFSTAFIDNSAA 3996
Query: 382 SMK 384
Sbjct: 3997 DFA 3999
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 67/180 (37%), Gaps = 15/180 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ S T D G G D L TLIGG + I + I G E +
Sbjct: 6857 SLSNDTITSGNHATFIDGGDGKDTLTGGAGADTLIGGRGDDILIGGAGADIIRGGEGDDR 6916
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ G SG+D +IG +++ S G D DG G+DT + S +
Sbjct: 6917 LLGGLESDTLDGGSGSDQLIGGGGDDMLLASRGRDDIDGGEGIDTVDFDGVS----LSNG 6972
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E ++ DA + + F + S+ + AS D+ + + + E
Sbjct: 6973 ERLVVRSDAGSSEGEL-----HYEFVSSRMSDKATLLASVQDAVASRADVTRALTDEAAE 7027
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + I+L T + S GG I + E++ GSS ND + G++ N
Sbjct: 7692 GVDTVSY-KSSDAGVTINLETGAAS--GGDASGDEI---SGFENIEGSSFNDHLTGDAGN 7745
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
N F S+GND G +T Y S I +
Sbjct: 7746 NTFVASTGNDQIFAGGGTNTVDYSRLSNGKGIVIESAGV 7784
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 9/135 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------ 322
E+VVG++ D + GN+ N G+D G +G DT + + E
Sbjct: 9849 ENVVGTNFADTLAGNAEENRIEAGRGDDKVIGDAGSDTLIGGEGTDTLEYIALEQAQVFD 9908
Query: 323 -NAIIVYDANEHKQDFLSDVERLRFA--DQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ V + + D +S E D + + A + I V
Sbjct: 9909 LDGGTVTSISSTETDSISGFESAIGTRNDDTFIASADANNFDGYFGADTISYRKSIQSVV 9968
Query: 380 FESMKHFYEFGLSEG 394
+ G +EG
Sbjct: 9969 LNLRDGTGQSGYAEG 9983
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 19/149 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I+ + + G GNDV+ G + ++ G D G D A
Sbjct: 5636 LHGGSRADHISGRAGSDEIFGLGGNDVLTGGAGTDILHGGDGRDYLLGGGENDIIIGGAG 5695
Query: 313 SYLYKIYRFENAIIVYDANEHKQ-------------------DFLSDVERLRFADQCIDS 353
+ + I Y + Q D +S+VE + +
Sbjct: 5696 ADRIDGGDGASDTIQYFGDASTQSGVIVNLTTGNGYGADAEGDQISNVEAVVGSAYDDRI 5755
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L+ A +D+ G D+ +
Sbjct: 5756 IGSATDEALQGGAGNDDISGNGGDDILDG 5784
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 24/138 (17%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----------------IGGVKNYIDLN 246
++Y + + ++ + +GGDDL + ++L
Sbjct: 6471 GSVYGDVISGTED--VEYLDGNGGDDLFIFSGGGDTIHGGGGKDILWLRDATTNLTLNLA 6528
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G AQ T IE + G G+D + G+ +N+F + G+D G SG D
Sbjct: 6529 SGEVVDAFGVT-----AQFTSIEGLGGGKGDDTIFGDDNDNIFLVTGGSDKIYGGSGNDR 6583
Query: 307 FFYYAPSYLYKIYRFENA 324
+ A + +
Sbjct: 6584 VDFRALDASVTVSTLDKG 6601
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 56/181 (30%), Gaps = 34/181 (18%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL---IGGVKNYIDLNT--------- 247
G G++ ++ F+ + G D + ++ G +DL T
Sbjct: 10798 GGTGDDTLHVD-------FVDAVDGGDGHDRVMFSVPVAHGDSGVILDLQTSRARFTHEN 10850
Query: 248 ----ESWSSIGGYEKNMTIAQHTVIESVVGS-------SGNDVVIGNSANNVFFESSGND 296
S G ++ + V+ + G G+D++ G + + +G+D
Sbjct: 10851 SLSTGVLQSFSGIDEIVGTQNADVLRAGRGGDLTLSGAGGDDILFG-TGGDTLQGGAGSD 10909
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D A + Y + I + D L L F D I +
Sbjct: 10910 RLYGRGG-DILVGGAGADSYYVTGPGTFTIDFAEGNGNLDTLHL--DLTFVDHQISTSGN 10966
Query: 357 K 357
Sbjct: 10967 D 10967
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 56/190 (29%), Gaps = 15/190 (7%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+D G G D + + I+ + Y T A +E +VGS D +
Sbjct: 10716 FDGGDGLDTVSYKNATAGVS-INF-ETNVHGTSTYRSGDTYAN---VEGIVGSKFADTLT 10770
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL--YKIYRFENAIIVYDANEHKQDFLS 339
G+ +N S GND G G DT + +D
Sbjct: 10771 GDENDNHLDGSDGNDTLVGGFGKDTLLGGTGDDTLHVDFVDAVDGGDGHDRVMFSVPVAH 10830
Query: 340 D----VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSE 393
+ L+ + N +L+ + ++++ D G
Sbjct: 10831 GDSGVILDLQTSRARFTHENSLSTGVLQSFSGIDEIVGTQNADVLRAGRGGDLTLSGAG- 10889
Query: 394 GRDITFDSYL 403
G DI F +
Sbjct: 10890 GDDILFGTGG 10899
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 40/124 (32%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + IE + GS D + GN+ +NV S G D G G DT+ S +
Sbjct: 4885 AHYDEIEYIAGSRFADTLTGNALDNVIVTSGGADQLRGGGGNDTYVISDSSSEIVVIDNY 4944
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++ Q + E D + + + + Q D
Sbjct: 4945 DEHTTSTESDVIQVSANQSELALQRDGQDLLLRLSDAADAGGARIKDWFGQAGDTDGGFK 5004
Query: 383 MKHF 386
+H
Sbjct: 5005 RRHI 5008
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 26/100 (26%), Gaps = 3/100 (3%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E +VGS ND + + G D G +G DT I +
Sbjct: 6851 VEELVGSLSNDTITSGNHATFIDGGDGKDTLTGGAGADTLIGGRGDD---ILIGGAGADI 6907
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
E L +E + AS
Sbjct: 6908 IRGGEGDDRLLGGLESDTLDGGSGSDQLIGGGGDDMLLAS 6947
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 8/142 (5%)
Query: 227 GDDLLDL-TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GD +D+ T++G N + +++ + + +SV SG+D IG +
Sbjct: 9257 GDTFIDIETIVGSDHNDRIVTGNGTTTVQAVAGDDHVTASNAGDSVDLGSGDDTFIGGAG 9316
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-----KQDFLSD 340
+GND + S DT + + + ++ I N+ + L
Sbjct: 9317 GVTVHGRAGNDTINAGSANDTLYGDEGADVISGGAGDDTISGGHGNDVLRGGIGTNTLKG 9376
Query: 341 --VERLRFADQCIDSVNVKQRS 360
+ L DQ DS +
Sbjct: 9377 DSGDDLFILDQGSDSADGGDGH 9398
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L + S G + I + + + G S D + G + ++ F GNDV G +G
Sbjct: 5609 NLFSNDGSVTGSHRLTNRIVGNDLDNKLHGGSRADHISGRAGSDEIFGLGGNDVLTGGAG 5668
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D Y + EN II+ A + D
Sbjct: 5669 TDILHGGDGRD-YLLGGGENDIIIGGAGADRID 5700
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 38/132 (28%), Gaps = 23/132 (17%)
Query: 224 DSGGDD-LLDLTLIGGVKNYIDLNTESWSS-------------------IGGYEKNMTIA 263
D GG D +DL + + S + G + IA
Sbjct: 7274 DEGGFDYTVDLAGLTDSDRLALTVDGTRSDSTVGVTSEADQGTIKDVERLVGTSGDDDIA 7333
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
V +G+D V G + ++ +G D G G D F ++
Sbjct: 7334 LDGKGYVVDAGAGDDTVKGGAGDDTLRGGTGRDALFGGIGDDRFI---DDLDSRVIDGGA 7390
Query: 324 AIIVYDANEHKQ 335
D +EH
Sbjct: 7391 GSDTLDLSEHTV 7402
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN- 331
GS +D + G++ NNV G+D G G D + I ++
Sbjct: 4744 GSDFSDTLTGDALNNVLTPGKGSDTVKGGDGHDYYVVSEGDGTITIDNSAQDGLLDTIRF 4803
Query: 332 EHKQDFLSDVER 343
++ F+ VE+
Sbjct: 4804 NFERTFILGVEQ 4815
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 21/129 (16%)
Query: 220 QTIYDSGGDDLLDLTLI----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE------ 269
TI GG D ++ + I ++ L +S + + + IE
Sbjct: 5859 DTIDAKGGADSINYSKIQLPQSSEQDGFLLVLKSSEDSTESDALVASYRGGRIEQTLIAV 5918
Query: 270 -SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+V GS D+++G+S ++ + G+D G++G D Y + E ++
Sbjct: 5919 ETVTGSLYRDIILGSSGSDHIDGALGSDTIFGAAGND----------YIVSTGEGGVVDG 5968
Query: 329 DANEHKQDF 337
A DF
Sbjct: 5969 GAGRDVADF 5977
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 25/198 (12%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY---------------EK 258
+ I +GGDD+LD G +N +D S S +
Sbjct: 5765 QGGAGNDDISGNGGDDILDG---GRGRNRLDGGAGSDSVSYDSNKNAVYVDLELGFVDKG 5821
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N IE++ GS ND + G A++ F S G D D G D+ Y
Sbjct: 5822 NGDFDYLYSIENIEGSRFNDDIRGTDASDFFLGSLGQDTIDAKGGADSINYSKIQLPQSS 5881
Query: 319 YRFENAIIVYDANEHKQ-DFLS------DVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ +++ + + + D L +E+ A + + + + + + D
Sbjct: 5882 EQDGFLLVLKSSEDSTESDALVASYRGGRIEQTLIAVETVTGSLYRDIILGSSGSDHIDG 5941
Query: 372 IQVIGQDVFESMKHFYEF 389
+ +
Sbjct: 5942 ALGSDTIFGAAGNDYIVS 5959
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 2/114 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE V G+SG D + G D F G +G + YA S +
Sbjct: 9192 IEEVRGASGADRFVQLPQGTTLSGGLGADQFVGRTGGNDVVSYADSATGVVIDRAANTAS 9251
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A E D D+E + +D V + ++ A + + D +
Sbjct: 9252 GTAAEG--DTFIDIETIVGSDHNDRIVTGNGTTTVQAVAGDDHVTASNAGDSVD 9303
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 44/147 (29%), Gaps = 13/147 (8%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
SS G ++ I S+ G G DV+ +N F +G+D+ G +
Sbjct: 11549 GYLSSDGDLLASVGINN-----SIYGGGGADVIAQLGGHNTAFGGAGDDLIYGLGNNNAL 11603
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
N ++ D N+ L + + + + +
Sbjct: 11604 SGNQGVDRLIAAGDSNLVLAGDGNDQVISTGKSTTILGGSGNDQVLLLGRNGWVR--GDA 11661
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEG 394
+D I G D H + G E
Sbjct: 11662 GDDYILAFGYD------HSVDGGAGED 11682
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 45/148 (30%), Gaps = 21/148 (14%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD---DLLDLTLI 236
+ +SDI A I G GN+ V + + G + LD +
Sbjct: 8552 PSYADLSDIAAFVDIAG----DRGNDDADRTVADQATNGYLAARAQGVNLQEVGLDYS-T 8606
Query: 237 GGVKNYIDLNT----------ESWSSIGGYEKNM---TIAQHTVIESVVGSSGNDVVIGN 283
IDLN S S N I + + G G D +
Sbjct: 8607 SDANVEIDLNASGNELVSNVTGSVVSENRISGNDLGNVITGGVAEDVLSGGLGRDDLDAK 8666
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ N+ + D DG G+DT Y
Sbjct: 8667 AGNDKLIGFADGDRIDGGEGVDTIDYSG 8694
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 45/163 (27%)
Query: 236 IGGVKNYIDLNTES----WSSIGGYEKNMTIAQH------------TVIESVVGSSGNDV 279
+ N I L+ ++ S + N I E +G+ +D
Sbjct: 8051 LTLSDNVIALSPKTPGIDLSKVVSSTTNTAITADHRARGKGLDQWVANAEHFIGTKYDDQ 8110
Query: 280 VIGNSANNVFFESSGNDVFD---------------------------GSSGLDTFFYYAP 312
+G+ A+ F G+DV G +G DT + A
Sbjct: 8111 FVGSDASERFDGGDGDDVIRGAVGNDIISGGDGDDLLLGDAGTDQFHGGAGDDTIYADAG 8170
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +++ + D +S L F+D+ V+
Sbjct: 8171 DNSISGGAGSDVLVLTGSVGASLDLVSG--DLLFSDEVASDVS 8211
Score = 44.7 bits (104), Expect = 0.050, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+V GS D + G+ +N F GND G G D + A Y
Sbjct: 5417 TVYGSDYADTINGSDGSNRIFSGLGNDTLVGGGGNDEYVLIAFEYD 5462
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 15/117 (12%)
Query: 238 GVKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G +N L + I T +++ G +G+D + G + + +G D
Sbjct: 10868 GTQNADVLRAGRGGDLTLSGAGGDDILFGTGGDTLQGGAGSDRLYGRGGD-ILVGGAGAD 10926
Query: 297 VFD-------------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ G+ LDT ++I N +I+ ++ + L D
Sbjct: 10927 SYYVTGPGTFTIDFAEGNGNLDTLHLDLTFVDHQISTSGNDLILTNSIGAARVVLKD 10983
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 53/188 (28%), Gaps = 31/188 (16%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ ++ + + G D + ++L + S GY +
Sbjct: 9933 GTRNDDTFIASADANNFDGYF------GADTISYRK-SIQSVVLNLRDGTGQS--GYAEG 9983
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T + IE VVG+ +D I + + + DG G DT Y I
Sbjct: 9984 DTFSN---IEKVVGTGFDDRFIASES--ILE-------IDGGDGTDTVSYQNNERAISID 10031
Query: 320 RFENAIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ DAN +E+ F D+ S + + G
Sbjct: 10032 -------LVDANSGLSTTFKSIEQFVGTSFDDRFRLEQTAYSIDAGLGQDSIDLSVWTSG 10084
Query: 377 QDVFESMK 384
+
Sbjct: 10085 AKIDSGNG 10092
Score = 41.3 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G+ +D ++GN +NVFF GND G G D + + + + I A
Sbjct: 4343 VTGTKDDDRLLGNVNDNVFFSRGGNDYLKGGLGQDIYHLEF-DHDFNSGNRSHVTIDNSA 4401
Query: 331 NEHKQDFL 338
+ K+D +
Sbjct: 4402 TDDKRDTI 4409
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 16/44 (36%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
V G+ + S G++ G DT + Y + FE
Sbjct: 5417 TVYGSDYADTINGSDGSNRIFSGLGNDTLVGGGGNDEYVLIAFE 5460
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 14/167 (8%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I T + + S + ++G+ +N+ + DG G DT A + R
Sbjct: 6836 IDPATSVTRIQRLSSVEELVGSLSNDTITSGNHATFIDGGDGKDTLTGGAGADTLIGGRG 6895
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV-- 379
++ +I D + E + + L+ + + LI G D+
Sbjct: 6896 DDILI----GGAGADIIRGGE------GDDRLLGGLESDTLDGGSGSDQLIGGGGDDMLL 6945
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G EG D + L + + L + HY
Sbjct: 6946 ASRGRDDIDGG--EGIDTVDFDGVSLSNGERLVVRSDAGSSEGELHY 6990
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
T I V G+D G N +F SSGND G G D +
Sbjct: 5057 TSIRQVSDFVGDDRFTGGKENEIFSSSSGNDTLVGGGGQDVYRI 5100
>gi|99082530|ref|YP_614684.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
gi|99038810|gb|ABF65422.1| Hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
Length = 767
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 13/146 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ T+Y G+DL+D DL + G N TI +++ G
Sbjct: 272 GSAGLNDTVYAGAGNDLIDGMYGD------DL-------LYGEGNNDTIYGDYGSDTIYG 318
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+D++ G ++ +G+D G +G D+ + + + + +
Sbjct: 319 GAGDDLLYGGDGDDTLAGGTGSDTMYGGAGNDSMVGFDDADTFILEDGFGNDTIVGGEGG 378
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQR 359
D D+ L + +
Sbjct: 379 TDDDFVDLSNLTSGVTVTYTGDEAGT 404
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 13/129 (10%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-----------LNTESWSSIGG 255
Y+I + + +I+D + + G + L S I G
Sbjct: 73 YEININAEAKTI--SIWDGTSWYSVGESGNTGTNATLGSPTLVDDFTVILANNSDDYIEG 130
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N ++ T +++ G G+D + G ++ GND DG +G DT
Sbjct: 131 SDNNDSLTGGTGNDTLSGDQGDDTLRGGDGDDYLTGGEGNDNIDGGTGNDTIRGDNAWTN 190
Query: 316 YKIYRFENA 324
+
Sbjct: 191 TSSGASGAS 199
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 1/119 (0%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
YI+ + G N T+ + + G G+D++ G N+ + G+D G
Sbjct: 260 YIEGAPNQTVNFGSAGLNDTVYAGAGNDLIDGMYGDDLLYGEGNNDTIYGDYGSDTIYGG 319
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G D + + + N+ F D + D + V
Sbjct: 320 AGDDLLYGGDGDDTLAGGTGSDTMYGGAGNDSMVGF-DDADTFILEDGFGNDTIVGGEG 377
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 20/152 (13%)
Query: 205 NIYKIEVQQKDSP-FIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYE----- 257
Y + + P F +I + LD T + I+ ++ S G
Sbjct: 37 TTYVVHGTNYNDPSFWASISEGSPGHTLDFTGLPPNYEININAEAKTISIWDGTSWYSVG 96
Query: 258 ------KNMTIAQHTVIES---VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N T+ T+++ ++ ++ +D + G+ N+ +GND G G DT
Sbjct: 97 ESGNTGTNATLGSPTLVDDFTVILANNSDDYIEGSDNNDSLTGGTGNDTLSGDQGDDTLR 156
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
Y D +
Sbjct: 157 GGDGDD----YLTGGEGNDNIDGGTGNDTIRG 184
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 23/159 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPF----IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +Y F + D G+D + G +++DL+ +
Sbjct: 337 GTGSDTMYGGAGNDSMVGFDDADTFILEDGFGNDTIVGGEGGTDDDFVDLSNLTSGVTVT 396
Query: 256 YEKN--MTIAQHT------VIESVVGSSGNDVVIG-----------NSANNVFFESSGND 296
Y + TI + IE + + DV+ + + S+G+D
Sbjct: 397 YTGDEAGTITDGSNTAEFSEIERIRLTDQADVLDASASLVGVDVDAGAGADTLTGSAGDD 456
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G +G D F + F+ D + Q
Sbjct: 457 SLTGGTGDDRFVMTTSGGTDTVGDFDLGDADLDGFYNDQ 495
>gi|75832168|ref|NP_001028820.1| matrix metalloproteinase 16 [Strongylocentrotus purpuratus]
gi|62005762|gb|AAX59991.1| matrix metalloproteinase 16 [Strongylocentrotus purpuratus]
Length = 562
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 79/223 (35%), Gaps = 46/223 (20%)
Query: 4 IKPVYTTERIADHLL--RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
P + + A H L R + +++ +++ LT L+ + + R A
Sbjct: 103 GVPDPSGQDTAGHALGGRMRRFAHTGGKWETHSLTFRILNSANRLRGSESDDAIRRAFKV 162
Query: 62 WSKVVDLTFEETSIHS--DI--KFISSNNG----YVCTPRYDSRYFM----------EIN 103
W +V L F E + DI F S ++G + + F +++
Sbjct: 163 WEEVTPLKFTEVQGNGRADIYLTFGSGDHGDQFPFDGPGFTLAHAFPPQSGWGEMDGDVH 222
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FD A+ + GT L A HEIGH+LGL H +M
Sbjct: 223 FDDAETYTVSSYDGTNLFQVAAHEIGHSLGLGHSTDSRA-------------------LM 263
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ F D Y D +Q++YG+ + S+G
Sbjct: 264 APFYAGYIP-DFQLPY------DDQQGIQRLYGSKRPSVGTTT 299
>gi|30348960|ref|NP_536701.1| matrix metalloproteinase-28 isoform 1 [Mus musculus]
gi|27461082|gb|AAL57761.1| matrix metalloproteinase-28 variant A precursor [Mus musculus]
gi|56207069|emb|CAI24738.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
gi|219518500|gb|AAI45050.1| Matrix metallopeptidase 28 (epilysin) [Mus musculus]
Length = 510
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 56/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGRS 290
>gi|12803593|gb|AAH02631.1| MMP28 protein [Homo sapiens]
gi|60655721|gb|AAX32424.1| matrix metalloproteinase 28 [synthetic construct]
gi|119600535|gb|EAW80129.1| matrix metallopeptidase 28, isoform CRA_b [Homo sapiens]
gi|325464269|gb|ADZ15905.1| matrix metallopeptidase 28 [synthetic construct]
Length = 393
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 59/198 (29%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPEHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGGS 290
>gi|86136135|ref|ZP_01054714.1| type I secretion target repeat protein [Roseobacter sp. MED193]
gi|85827009|gb|EAQ47205.1| type I secretion target repeat protein [Roseobacter sp. MED193]
Length = 1088
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 5/156 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D L +GG N N+ S+ G N +I +++ G G+D + G + N
Sbjct: 501 GNDTL----VGGEGNDTLHNSAGDDSLVGGVGNDSIVATDGNDTLEGGIGDDTMFGGNDN 556
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ G DV DG +G DT ++ I N+ L + + L
Sbjct: 557 DSLDGGDGADVLDGGAGSDTLIGGDGGDTISGGDGDDYIEGGLGNDSLTTGLGN-DTLIG 615
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ N L + ++ G D E
Sbjct: 616 GEGDDTLRNSAGDDSLVGGVGNDSIVATDGNDTLEG 651
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 77/241 (31%), Gaps = 18/241 (7%)
Query: 167 MPQDSMMDASFGYCATPMVSDIV--AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
++ D + A + +Q G +L ++ V T+
Sbjct: 367 SEMNNYTDQDAWFSAEFEDRSSIEFTLQTRDGYSGFTLSGDVIDDPVLTPIEQGSDTVMA 426
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GDD++ G N + E S+ G E + + ++++G +G D + G
Sbjct: 427 GEGDDVV----YGQGGNDSLMGEEGDDSLDGGEGDDVMDGGVGADTLMGGAGGDTLSGGE 482
Query: 285 ANNVFFESSG---------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
++ G ND G G DT A ++I+ D N+ +
Sbjct: 483 GDDYIDGGEGDDFLSTGIGNDTLVGGEGNDTLHNSAGDDSLVGGVGNDSIVATDGNDTLE 542
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSE 393
+ D + + + +L+ A + LI G D + E GL
Sbjct: 543 GGIGD-DTMFGGNDNDSLDGGDGADVLDGGAGSDTLIGGDGGDTISGGDGDDYIEGGLGN 601
Query: 394 G 394
Sbjct: 602 D 602
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 52/185 (28%), Gaps = 21/185 (11%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNY-------IDLNTESWSS--IGGYEKNMTIA 263
T+ G+D L D +L+GGV N D + G N ++
Sbjct: 501 GNDTLVGGEGNDTLHNSAGDDSLVGGVGNDSIVATDGNDTLEGGIGDDTMFGGNDNDSLD 560
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +G+D +IG + G+D +G G D+ +
Sbjct: 561 GGDGADVLDGGAGSDTLIGGDGGDTISGGDGDDYIEGGLGNDSLTTGLGNDTL----IGG 616
Query: 324 AIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N D L + + D + + L G DV
Sbjct: 617 EGDDTLRNSAGDDSLVGGVGNDSIVATDGNDTLEGGSGADTMYGGNDNDLLAGGTGDDVM 676
Query: 381 ESMKH 385
Sbjct: 677 HGEAD 681
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 10/143 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
TI GDD + + +L G+ N + E ++ + ++
Sbjct: 574 SDTLIGGDGGDTISGGDGDDYIEGGLGNDSLTTGLGNDTLIGGEGDDTLRNSAGDDSLVG 633
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+S+V + GND + G S + + + ND+ G +G D A S + +
Sbjct: 634 GVGNDSIVATDGNDTLEGGSGADTMYGGNDNDLLAGGTGDDVMHGEADSDTFLMEDSFGN 693
Query: 325 IIVYDANEHKQDFLSDVERLRFA 347
+ D + + F+
Sbjct: 694 DTLTGGEAG-----VDFDTVDFS 711
Score = 38.6 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 50/166 (30%), Gaps = 28/166 (16%)
Query: 194 IYGAPKGS-----LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+YG G+++ E + DS G+D L G + +D ++
Sbjct: 658 MYGGNDNDLLAGGTGDDVMHGEADSDT----FLMEDSFGNDTLTGGEAGVDFDTVDFSSL 713
Query: 249 SWSSIGGYEKNMTIAQH--------TVIESVVGSSGNDVVIG-----------NSANNVF 289
S Y N + IE ++ S DVV G + ++
Sbjct: 714 SNGLSVTYTGNEAGTVTDGTDTVTFSEIERLILSGQADVVDGSADGGGLSIDAGAGDDTI 773
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
SG+D G D + + F + D + Q
Sbjct: 774 TMGSGDDSITLGDGYDELVLTTSGGIDTVTDFNISDDDSDGFYNDQ 819
Score = 38.2 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
G E + + T + + G+D V G +++ +G+DV G G
Sbjct: 162 YGSEDDDQMGGSTSDDYIDAGGGSDTVAGEEGHDIIDGGAGSDVIYGDMG 211
>gi|307720204|ref|YP_003891344.1| Lipopolysaccharide biosynthesis protein [Sulfurimonas autotrophica
DSM 16294]
gi|306978297|gb|ADN08332.1| Lipopolysaccharide biosynthesis protein [Sulfurimonas autotrophica
DSM 16294]
Length = 620
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
I Y +Y D+ + + + H+ ++G EGR+ + FD+ YL +Y+D++
Sbjct: 17 SDLFDIKYYLFTYTDIRAM----DIDPIWHYIKYGADEGRNPSDKFDTSFYLSTYNDVKE 72
Query: 414 VFGSDRGAAARHYITHGVKEGRN 436
HYI HG EGR
Sbjct: 73 ----KGVNPLAHYILHGKNEGRK 91
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 21/122 (17%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL +Y D+R + HYI +G EGRNP F Y++++ D+
Sbjct: 20 FDIKYYLFTYTDIRAM----DIDPIWHYIKYGADEGRNPSDKFDTSFYLSTYNDVKEKGV 75
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG---------SYDDLRNVFGSDRGAAAR 508
+ H+ G EGR + +Y Y + N +D
Sbjct: 76 NP-------LAHYILHGKNEGRKTSKSNYSNKSSDAVSIPKYKYVKVNNALKNDSVCIFA 128
Query: 509 HY 510
HY
Sbjct: 129 HY 130
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
+ D F Y+ ++ D+ D H+ +G +EGR+ + F+ YL++Y
Sbjct: 15 KKSDLFDIKYYLFTYTDIRAMDIDP-------IWHYIKYGADEGRNPSDKFDTSFYLSTY 67
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRAL--------GISGMQFKSVMNLSEKSRDKADL 628
+D+ HYI HG EGR + + + K D
Sbjct: 68 NDVKEK----GVNPLAHYILHGKNEGRKTSKSNYSNKSSDAVSIPKYKYVKVNNALKNDS 123
Query: 629 SLSFDHKKVD 638
F H D
Sbjct: 124 VCIFAHYDKD 133
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 21/122 (17%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFA 541
FD YL +Y D+R + HYI +G EGRNP D F Y++++ D+
Sbjct: 20 FDIKYYLFTYTDIRAM----DIDPIWHYIKYGADEGRNPSDKFDTSFYLSTYNDVKEKGV 75
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT---------SYDDLWNVFGSDRSAAAQ 592
+ H+ G EGR + + + Y + N +D
Sbjct: 76 NP-------LAHYILHGKNEGRKTSKSNYSNKSSDAVSIPKYKYVKVNNALKNDSVCIFA 128
Query: 593 HY 594
HY
Sbjct: 129 HY 130
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 13/86 (15%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
D F Y+ ++ D+ D H+ +G +EGR + FD+ YL +Y+
Sbjct: 16 KSDLFDIKYYLFTYTDIRAMDIDP-------IWHYIKYGADEGRNPSDKFDTSFYLSTYN 68
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGR 519
D++ HYI HG EGR
Sbjct: 69 DVKEKG----VNPLAHYILHGKNEGR 90
>gi|113474447|ref|YP_720508.1| hypothetical protein Tery_0591 [Trichodesmium erythraeum IMS101]
gi|110165495|gb|ABG50035.1| FG-GAP [Trichodesmium erythraeum IMS101]
Length = 813
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 2/154 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G++ + N+I+ ++ G N TI + + G+SGND + G + N
Sbjct: 532 GNNKNNTLKGNNKANFINGVGGKD-NLKGSGGNDTILGGGGNDRLDGNSGNDTLTGEAGN 590
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ SGND +G G D + N I+ ++ K + ++L
Sbjct: 591 DSLNGGSGNDKLNGGGGNDILNGGSGRDRLD-GSGGNDILNGGSSNDKLNGGGGNDKLNG 649
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + IL + + ++ G D
Sbjct: 650 GSGRDRLIGNNGKDILTGGSGNDTILGGGGDDEL 683
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 65/190 (34%), Gaps = 8/190 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IG 254
G K + N + + K S TI GG+D LD G L E+ + +
Sbjct: 541 GNNKANFINGV-GGKDNLKGSGGNDTILGGGGNDRLD-----GNSGNDTLTGEAGNDSLN 594
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + G SG D + G+ N++ S ND +G G D +
Sbjct: 595 GGSGNDKLNGGGGNDILNGGSGRDRLDGSGGNDILNGGSSNDKLNGGGGNDKLNGGSGRD 654
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++ + N+ D E + + + + + Y++ +
Sbjct: 655 RLIGNNGKDILTGGSGNDTILGGGGDDELIGGSGNDLLNGGSGDDKFI-YSSRKAFNRKT 713
Query: 375 IGQDVFESMK 384
G+D +
Sbjct: 714 FGKDRIANFA 723
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 19/153 (12%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWS 251
G+ GN+ E + GG+D+L+ L G N I LN S +
Sbjct: 577 GNSGNDTLTGEAGNDSLNGGSGNDKLNGGGGNDILNGGSGRDRLDGSGGNDI-LNGGSSN 635
Query: 252 S-IGGYEKNMTIAQHTVIESVVG---------SSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ G N + + + ++G SGND ++G ++ SGND+ +G
Sbjct: 636 DKLNGGGGNDKLNGGSGRDRLIGNNGKDILTGGSGNDTILGGGGDDELIGGSGNDLLNGG 695
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG D F Y + + ++ I + K
Sbjct: 696 SGDDKFIYSSRKAFNRKTFGKDRIANFAPGSDK 728
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 1/151 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + I + N + +++ G K I +++ GS GND ++G N+
Sbjct: 518 DSSNISVILNTSLIGNNKNNTLKGNNKANFINGVGGKDNLKGSGGNDTILGGGGNDRLDG 577
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+SGND G +G D+ + + N I+ + + D + L
Sbjct: 578 NSGNDTLTGEAGNDSLNGGSGNDKLN-GGGGNDILNGGSGRDRLDGSGGNDILNGGSSND 636
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L + + LI G+D+
Sbjct: 637 KLNGGGGNDKLNGGSGRDRLIGNNGKDILTG 667
>gi|157278503|ref|NP_001098353.1| membrane-type matrix metalloproteinase [Oryzias latipes]
gi|46359589|dbj|BAD15297.1| membrane-type matrix metalloproteinase [Oryzias latipes]
Length = 658
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 61/206 (29%), Gaps = 56/206 (27%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L W+ + Y T ++ E R A W +V LTF+E
Sbjct: 116 YALTGHKWTKSHLTYSIQNYTPKIGEYESFE-------AIRRAFKVWERVTPLTFDEIPY 168
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRY-FMEINFDKADVWRYG 113
H D G++ + + +FD + W G
Sbjct: 169 QEIKYGRRKEPDIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGMGGDTHFDSDEPWTIG 228
Query: 114 IGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + +M+ F
Sbjct: 229 NQNVQGNDLFLVAVHELGHALGLEHSNNPLA-------------------IMAPFYQWME 269
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGA 197
+ D+ +Q+IYG
Sbjct: 270 TENFQ------LPDDDLQGIQRIYGP 289
>gi|260818324|ref|XP_002604333.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
gi|229289659|gb|EEN60344.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
Length = 524
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 78/222 (35%), Gaps = 67/222 (30%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+ IAD+ L W I Y+ + T + ++ ++ R A G WS LTF
Sbjct: 131 DIIADYQLSGTKWEKNHITYRIENFTPYLTEQEV-------RDTVRTAFGVWSDYTPLTF 183
Query: 71 EETSIHS----DI--KFISSNNG--------------------YVCTPRYDSRYF---ME 101
E DI +F S ++G + P DS + +
Sbjct: 184 SEVRDRDRTDVDILVEFTSGDHGDNSPFDGRYVPGTGRGQNLAHAFQPPRDSHSYRIDGD 243
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
+FD + W +G L A+HE GHALG+ H P G
Sbjct: 244 SHFDGDEEWTLNTDRGVNLLIVAIHEFGHALGISH-------TPTLGA------------ 284
Query: 162 VMSYFMPQDSMMDASFGYCATPMV--SDIVAVQKIYGAPKGS 201
+M ++ Y P + D A+Q++YGA +
Sbjct: 285 IM----------FPAYVYQEEPCIHPDDKAAIQELYGAQEVP 316
>gi|293348995|ref|XP_001072313.2| PREDICTED: matrix metalloproteinase 1b (interstitial collagenase)
[Rattus norvegicus]
gi|293360883|ref|XP_235849.3| PREDICTED: matrix metalloproteinase 1b (interstitial collagenase)
[Rattus norvegicus]
Length = 460
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 62/192 (32%), Gaps = 54/192 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-- 79
W+ + Y T H ++ A WS V LTFE DI
Sbjct: 103 WTKTHLTYSILNYTPHLPR-------KVVEDAIERAFKVWSDVTPLTFERVFEEEGDIVL 155
Query: 80 KFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSHNALHEI 128
F ++G + + +F ++++D + W + A HE+
Sbjct: 156 SFHQGDHGDLYSFNGSKSHFAHAFPPGPGLGGDVHYDLDETWTNNSDNFNLFYVTA-HEL 214
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SY-FMPQDSMMDASFGYCATPMV 185
GH+LGL H +M SY + +D +++
Sbjct: 215 GHSLGLSHSKDEEA-------------------LMFPSYTWNNKDFVLNQ---------- 245
Query: 186 SDIVAVQKIYGA 197
DI +Q +YG
Sbjct: 246 DDISKIQALYGP 257
>gi|27446748|gb|AAL47576.1| matrix metalloproteinase-28 precursor [Mus musculus]
gi|56207071|emb|CAI24740.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
gi|219520252|gb|AAI45049.1| Mmp28 protein [Mus musculus]
Length = 520
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 56/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGRS 290
>gi|148683760|gb|EDL15707.1| matrix metallopeptidase 28 (epilysin), isoform CRA_d [Mus musculus]
Length = 543
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 56/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 160 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 212
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD + W +G L
Sbjct: 213 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRRGRNLFVVLA 272
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 273 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 306
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 307 -DDVLAVQSLYGKPLGRS 323
>gi|118085141|ref|XP_001235210.1| PREDICTED: similar to matrix metalloproteinase-13 [Gallus gallus]
Length = 471
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 59/184 (32%), Gaps = 40/184 (21%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI--KFISS 84
+++ LT +S+ + + A WS V L F S +DI F +
Sbjct: 111 LKWSNTNLTYRIMSYTSDLRRAEVERAFKRAFKVWSDVTPLNFTRIRSGTADIMISFGTK 170
Query: 85 NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+G P Y + +FD + W +G L A HE GH+LG
Sbjct: 171 EHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDETWSDD-SRGYNLFLVAAHEFGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H +M P + S D+ +Q+
Sbjct: 230 LEHSRDPGA-------------------LM---FPIYTYTGKSGFVLP---DDDVQGIQE 264
Query: 194 IYGA 197
+YGA
Sbjct: 265 LYGA 268
>gi|186687000|ref|YP_001870389.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
gi|186469624|gb|ACC85421.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
Length = 2495
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/318 (16%), Positives = 100/318 (31%), Gaps = 37/318 (11%)
Query: 205 NIYKIEVQQKDSPFIQTIYDS--GGDDLLDLTLIGGVKNYI----------DLNTESWSS 252
N+ + ++D D D+ + I DLN ++
Sbjct: 2087 NLDNLSATSSRPALGNILFDGQTSITDSFDVIDANSTQTSIFTKNTVTFLNDLN----NN 2142
Query: 253 IGGYEK-NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G++ N I + + G SGND++ G + N+ +GND+ G +G DTF ++
Sbjct: 2143 ITGFDNSNDVINGQGGNDIINGLSGNDILRGGAGNDTLIGGAGNDILTGGTGNDTFVFHP 2202
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN-----VKQRSILEYTA 366
I F V + +S ++ L+F + + N + +
Sbjct: 2203 DDGNDTITDFGG---VGKGSNPSAAVISQLDTLQFTGSGLTARNLQLTQNGNNLEVSFEN 2259
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + + +I FD + D+ + + ++
Sbjct: 2260 VANTKVTLQNFKLENLDNLSATSSRPALGNILFDGQTSITDSFDVIDANSTQTSIFTKNT 2319
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+T N F D+IN + + + G D+
Sbjct: 2320 VTFLNDLNNNITGFDNS------NDVINGQGGNDIINGLSGNDILRGG------AGNDTL 2367
Query: 487 LYLGSYDDLRNVFGSDRG 504
+ D LR G+DR
Sbjct: 2368 IGGAGNDMLRGGAGADRF 2385
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 27/198 (13%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYID----LNTESWSSIGGYE 257
N IY + + + SG G D++D G + ID LN+ES +
Sbjct: 1626 NIIYGGSGNDQLFGGDDSDFISGDAGSDVIDG---GAGDDLIDGDGILNSESTPNSS--- 1679
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
A + VI G G+D+++G ++ G+D+ DG G DT YK
Sbjct: 1680 -----AANDVI---NGGQGDDILLGGIGDDRLIPGKGDDLIDGGEGTDTGVASGKQENYK 1731
Query: 318 I-YRFENAIIVYDA----NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I R + +++V D N + D ER F+D+ + V + ED
Sbjct: 1732 IRKRLDGSVVVIDRRTSDNNEGLELYRDTERFEFSDRTLTIDKVPSSEGS--ASINEDQT 1789
Query: 373 QVIGQDVFESMKHFYEFG 390
QV Q +++ G
Sbjct: 1790 QVNVQTSQGNLQLKSMEG 1807
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 17/147 (11%)
Query: 205 NIYKIEVQQKDSPFIQTIYDS--GGDDLLDLTLIGGVKNYI----------DLNTESWSS 252
N+ + ++D D D+ + I DLN ++
Sbjct: 2274 NLDNLSATSSRPALGNILFDGQTSITDSFDVIDANSTQTSIFTKNTVTFLNDLN----NN 2329
Query: 253 IGGYEK-NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G++ N I + + G SGND++ G + N+ +GND+ G +G D F Y
Sbjct: 2330 ITGFDNSNDVINGQGGNDIINGLSGNDILRGGAGNDTLIGGAGNDMLRGGAGADRFLYNT 2389
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL 338
+ + I ++++E + L
Sbjct: 2390 GTAFKGSAIGVDTITDFNSSEGDKIVL 2416
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I T + G++ ++ + GNS +NV + GND G+ G DTF + I F
Sbjct: 1966 ILLGTDNINGTGNALDNQITGNSGDNVLYGGKGNDTLSGNGGQDTFVFRLGDGNDTITDF 2025
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + ++ ++ L+F + + + N++
Sbjct: 2026 AG---IGRGSNPSAKVITQLDTLQFIGRGLTARNLQLTQ 2061
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 16/146 (10%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G SGND + G ++ +G+DV DG +G D A V +
Sbjct: 1628 IYGGSGNDQLFGGDDSDFISGDAGSDVIDGGAGDDLIDGDGILNSESTPNSSAANDVING 1687
Query: 331 NEHKQDFLSDV----------ERLRFADQCIDSVNVKQRSILEYTASYED----LIQVIG 376
+ L + + L + D+ + D +I
Sbjct: 1688 GQGDDILLGGIGDDRLIPGKGDDLIDGGEGTDTGVASGKQENYKIRKRLDGSVVVIDRRT 1747
Query: 377 QDVFESMKHFYEFGLSE--GRDITFD 400
D E ++ + + E R +T D
Sbjct: 1748 SDNNEGLELYRDTERFEFSDRTLTID 1773
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 10/98 (10%)
Query: 215 DSPFIQTIYDSGG-------DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
D IYD G + TL G+ N I L T++ + G N I ++
Sbjct: 1931 DGAVNGVIYDPGVLAQVNTVRSSVSQTLKDGIPNLILLGTDNINGTGNALDN-QITGNSG 1989
Query: 268 IESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSG 303
+ G GND + GN + F GND +G
Sbjct: 1990 DNVLYGGKGNDTLSGNGGQDTFVFRLGDGNDTITDFAG 2027
>gi|325136541|gb|EGC59145.1| iron-regulated protein FrpA [Neisseria meningitidis M0579]
Length = 669
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 393 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 450
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 451 GSTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 488
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 489 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 546
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 547 GEGFGQDTVYN 557
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y +A+ +
Sbjct: 453 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 512
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 513 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 572
Query: 390 GLS 392
+
Sbjct: 573 KAA 575
>gi|109128713|ref|XP_001101050.1| PREDICTED: matrix metalloproteinase-15 [Macaca mulatta]
Length = 669
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + ++ E R A W + L F+E
Sbjct: 132 YALTGRKWNNHHLTFSIQNYTEKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 184
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 185 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 244
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + N +M+ F
Sbjct: 245 STDLHGNNLFLVAVHELGHALGLEHSSNPNA-------------------IMAPFYQWKD 285
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 286 VDNFK------LPEDDLRGIQQLYGTPDG 308
>gi|297272410|ref|XP_001114445.2| PREDICTED: matrix metalloproteinase-28 isoform 1 [Macaca mulatta]
Length = 520
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 58/198 (29%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGGS 290
>gi|148683761|gb|EDL15708.1| matrix metallopeptidase 28 (epilysin), isoform CRA_e [Mus musculus]
Length = 553
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 56/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 160 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 212
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD + W +G L
Sbjct: 213 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRRGRNLFVVLA 272
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 273 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 306
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 307 -DDVLAVQSLYGKPLGRS 323
>gi|90417984|ref|ZP_01225896.1| possible hemolysin-type calcium-binding region [Aurantimonas
manganoxydans SI85-9A1]
gi|90337656|gb|EAS51307.1| possible hemolysin-type calcium-binding region [Aurantimonas
manganoxydans SI85-9A1]
Length = 845
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 74/218 (33%), Gaps = 33/218 (15%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT------------IYDSGGDDLLDLTL 235
I + +Y G +++ +V D +QT I + GDD+L T
Sbjct: 280 IGLDRWLYTPATDETGAVVFRYQVSDGDEVVMQTAHLEIRLPETEAIVGTDGDDMLIGTP 339
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
DL I G N I + + G GND ++G + N++ + GN
Sbjct: 340 YA------DL-------IDGRGGNDMIYGRESDDILYGGDGNDRLVGGAGNDILWGGRGN 386
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFL---SDVERLRFA 347
D+ G G DT F L + I D N+ D++ +RL
Sbjct: 387 DILFGGDGDDTLFGEQGDDLLYGDAGNDVIFGGDGNDEAHGGDGNDYIDGGVGNDRLFGE 446
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D +E A + LI G D+ +
Sbjct: 447 DGADVIHGGDGDDHIEGGAGADVLIGGAGADMIDGGAD 484
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 15/200 (7%)
Query: 194 IYGAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
IYG + +Y + + ++ G+D+L D TL G + +
Sbjct: 353 IYGRE---SDDILYGGDGNDRLVGGAGNDILWGGRGNDILFGGDGDDTLFGEQGDDLLYG 409
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
I G + N + + G GND + G +V G+D +G +G D
Sbjct: 410 DAGNDVIFGGDGNDEAHGGDGNDYIDGGVGNDRLFGEDGADVIHGGDGDDHIEGGAGADV 469
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEY 364
A + + V ++ + + L + +L
Sbjct: 470 LIGGAGAD---MIDGGADDDVLHGDDGGDQLFGGIGNDELHGGGGNDALDGGEGDDVLHG 526
Query: 365 TASYEDLIQVIGQDVFESMK 384
+ + G DV
Sbjct: 527 DDGDDTMFGASGNDVLHGGA 546
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 56/198 (28%), Gaps = 22/198 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQ 264
+ + + G D++D V + D + + IG G N +
Sbjct: 458 DDHIEGGAGADVLIGGAGADMIDGGADDDVLHGDDGGDQLFGGIGNDELHGGGGNDALDG 517
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK------- 317
+ + G G+D + G S N+V +GND G G D A + L
Sbjct: 518 GEGDDVLHGDDGDDTMFGASGNDVLHGGAGNDAIHGGEGDDVAHGGAGADLIDGGEGHDV 577
Query: 318 ----------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
N + A D + L D + +L A
Sbjct: 578 LHGNGGDDQIFGDIGNDEVHGGAGADAIDGGEGDDILHGDDGDDYIIGAAGNDMLFDGAG 637
Query: 368 YEDLIQVIGQDVFESMKH 385
+ L G D +
Sbjct: 638 VDTLEGGEGDDCIALVAD 655
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 13/149 (8%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--------SWSS 252
+ ++ I+ GDD + G + ID
Sbjct: 530 DDTMFGASGNDVLHGGAGNDAIHGGEGDD---VAHGGAGADLIDGGEGHDVLHGNGGDDQ 586
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + +++ G G+D++ G+ ++ ++GND+ +G+DT
Sbjct: 587 IFGDIGNDEVHGGAGADAIDGGEGDDILHGDDGDDYIIGAAGNDMLFDGAGVDTLEGGEG 646
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ VY + LS++
Sbjct: 647 DDCIALVADGETDTVYGGGGNDTLDLSEI 675
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
D D G M+ D V + +G G++ + + T+Y GG+
Sbjct: 616 GDDGDDYIIGAAGNDMLFDGAGVDTL----EGGEGDDCIALVADGETD----TVYGGGGN 667
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D LDL+ I I+L + W +I G + A+ IE++ G GND ++ + N+
Sbjct: 668 DTLDLSEI-VFDATINL-PDGWVTIDGTRE----ARLFEIENIRGGHGNDRLVADDEVNI 721
Query: 289 FFESSGNDVF 298
+GND+F
Sbjct: 722 MVGGAGNDIF 731
>gi|296284681|ref|ZP_06862679.1| VCBS [Citromicrobium bathyomarinum JL354]
Length = 1045
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 8/112 (7%)
Query: 261 TIAQHTVIESVVG-------SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
T + + +G +G+ V G N+ GND+ DG G DT +
Sbjct: 517 TTVYGDGLSNAIGVDPVSSSGTGSMVFYGRGGNDTLTGGLGNDILDGGEGTDTAVFSGSR 576
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
Y I + + + D L+ +E L+FAD L Y
Sbjct: 577 DAYAITQIADG-QFEVSGPDGTDTLTSIEHLQFADGTYVFGPTTGPVSLGYA 627
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
I ++ G G+D+++ + +++ + GND D +G D F A
Sbjct: 280 TATTGTLIEGGNGPNTLRGGDGDDIILTGAGDDIAYGGGGNDRIDPGTGADQIFGEAGDD 339
Query: 315 LYKIYR 320
+
Sbjct: 340 WIEFSS 345
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 48/145 (33%), Gaps = 21/145 (14%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-------------- 296
+++ G + + I + G GND + + + F +G+D
Sbjct: 294 NTLRGGDGDDIILTGAGDDIAYGGGGNDRIDPGTGADQIFGEAGDDWIEFSSVMVSSPQP 353
Query: 297 ----VFDGSSGLDTFFYYA--PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ- 349
+ DG + DT A P L I + ++ + +VER+ D+
Sbjct: 354 ETIGILDGGADFDTLDLRAVWPVTLGTISTSPGVFSLGVYVGSQRYSIVNVERILLGDRD 413
Query: 350 CIDSVNVKQRSILEYTASYEDLIQV 374
++N Y +D I
Sbjct: 414 DTATLNQAPFGTELYAGGGDDNITA 438
Score = 37.0 bits (84), Expect = 9.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I G T+ + ++ +G+D+ G N+ +G D G +G D
Sbjct: 287 IEGGNGPNTLRGGDGDDIILTGAGDDIAYGGGGNDRIDPGTGADQIFGEAGDD 339
>gi|323698688|ref|ZP_08110600.1| outer membrane adhesin like proteiin [Desulfovibrio sp. ND132]
gi|323458620|gb|EGB14485.1| outer membrane adhesin like proteiin [Desulfovibrio desulfuricans
ND132]
Length = 2133
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 4/129 (3%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ V S +Y S GDD L G N +I G + ++
Sbjct: 1894 HNATVTDTASENGDVMYGSDGDDTLS----GLGGNDFLYGEAGDDTIDGGAGHDYLSGGD 1949
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
I+ + G GND + G S ++V +GND G SG DT + A + ++ +
Sbjct: 1950 GIDHLYGGDGNDYLFGGSGDDVLHGGAGNDHLFGGSGNDTLWGGAGDDVIDAGSGDDTVF 2009
Query: 327 VYDANEHKQ 335
+ ++
Sbjct: 2010 ISSGHDTVT 2018
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 203 GNNIYKIEVQQKDSP--FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ +Y + S +Y GDD +D GG + + + G + N
Sbjct: 1906 GDVMYGSDGDDTLSGLGGNDFLYGEAGDDTID----GGAGHDYLSGGDGIDHLYGGDGND 1961
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + + G +GND + G S N+ + +G+DV D SG DT F + +
Sbjct: 1962 YLFGGSGDDVLHGGAGNDHLFGGSGNDTLWGGAGDDVIDAGSGDDTVFISSGHDTVTLGA 2021
Query: 321 FENAIIV 327
+ I+V
Sbjct: 2022 GADTIMV 2028
Score = 40.5 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 7/105 (6%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ +V + S G+D G G D + A A Y + D L
Sbjct: 1901 TASENGDVMYGSDGDDTLSGLGGNDFLYGEAGDDTID----GGAGHDYLSGGDGIDHLYG 1956
Query: 341 VE--RLRFADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQDVFES 382
+ F D ++ + L + + L G DV ++
Sbjct: 1957 GDGNDYLFGGSGDDVLHGGAGNDHLFGGSGNDTLWGGAGDDVIDA 2001
>gi|73955232|ref|XP_854639.1| PREDICTED: similar to matrix metalloproteinase 20 preproprotein
[Canis familiaris]
Length = 483
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 64/197 (32%), Gaps = 51/197 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW-ALGEWSKVVDLTFEET-SIHSDIK 80
W + Y+ T + ++P + A AL W V L+F S +DI
Sbjct: 117 WKKNTLTYRISKYT--------SSMSPAEVDKAVEMALQAWGSAVPLSFIRVNSGEADIM 168
Query: 81 FISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHE 127
+ + +D + +FD A+ W G+ G L A HE
Sbjct: 169 ISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN-GFNLFTVAAHE 227
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GHALGL H + YP Y + Y F
Sbjct: 228 FGHALGLAHSTDPSALMYPTYKYQHPYG----------------------FHLP----KD 261
Query: 187 DIVAVQKIYGAPKGSLG 203
D+ +Q +YG K LG
Sbjct: 262 DVKGIQALYGPRKTLLG 278
>gi|297272408|ref|XP_002800423.1| PREDICTED: matrix metalloproteinase-28 isoform 2 [Macaca mulatta]
Length = 510
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 58/198 (29%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGGS 290
>gi|325129777|gb|EGC52586.1| Iron-regulated protein frpA [Neisseria meningitidis OX99.30304]
Length = 669
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 393 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 450
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 451 GSTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 488
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 489 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 546
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 547 GEGFGQDTVYN 557
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y +A+ +
Sbjct: 453 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 512
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 513 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 572
Query: 390 GLS 392
+
Sbjct: 573 KAA 575
>gi|26354408|dbj|BAC40832.1| unnamed protein product [Mus musculus]
Length = 339
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 60/189 (31%), Gaps = 47/189 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-----ET-- 73
W ++ Y+ T D+ + + A WS V L F E
Sbjct: 111 SRWMKRYLTYRIYNYTPDMKREDVDY-------IFQKAFQVWSDVTPLRFRKLHKDEADI 163
Query: 74 ------SIHSDIKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGIGKGTILSHNALH 126
H D + G + Y + +FD+A+ W +GT L A+H
Sbjct: 164 MILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + S + Y P + A
Sbjct: 223 ELGHSLGLQHSNN---------------PKSIMYPTYRYLNPSTFRLSA----------D 257
Query: 187 DIVAVQKIY 195
DI +Q +Y
Sbjct: 258 DIRNIQSLY 266
>gi|15677274|ref|NP_274427.1| iron-regulated protein FrpC [Neisseria meningitidis MC58]
gi|12230091|sp|Q9JYV5|FRPC_NEIMB RecName: Full=Iron-regulated protein frpC
gi|7226653|gb|AAF41776.1| iron-regulated protein FrpC [Neisseria meningitidis MC58]
Length = 1829
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1353 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1410
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1411 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LNGGEGNDALYGYNGND 1466
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1467 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKD 1526
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1527 IIRFTDGITAD 1537
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 953 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1010
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1011 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 1066
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1067 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1126
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1127 IIRFTDGITAD 1137
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 70/203 (34%), Gaps = 35/203 (17%)
Query: 141 NGGYPVYGVDNDYENDSFL---TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
N G Y +D + ++ + +V D + Y + ++ + +YGA
Sbjct: 1167 NDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGA 1226
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+++ +IY G+D LD G E
Sbjct: 1227 D----GDDL------LNGDAGNDSIYSGNGNDTLD----------------------GGE 1254
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + +++ G GND + G N+ +GND +G SG DT+ +
Sbjct: 1255 GNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDA 1314
Query: 318 IYRFENAIIVYDANEHKQDFLSD 340
+Y ++ A D +D
Sbjct: 1315 VYNYDYATGRKDIIRFTDGITAD 1337
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1553 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1610
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1611 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1648
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1649 TLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1706
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1707 GEGFGQDTVYN 1717
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1613 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1672
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1673 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1732
Query: 390 GLS 392
+
Sbjct: 1733 KAA 1735
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 860 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 919
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 920 YATGRKDIIRFTDGITAD 937
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 2/120 (1%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 1213 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1272
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D V D K F
Sbjct: 1273 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQD--AVYNYDYATGRKDIIRF 1330
>gi|209522963|ref|ZP_03271520.1| outer membrane adhesin like proteiin [Arthrospira maxima CS-328]
gi|209496550|gb|EDZ96848.1| outer membrane adhesin like proteiin [Arthrospira maxima CS-328]
Length = 2722
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 11/155 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D + + ID + + I G + I +S+ G+ GND + G +
Sbjct: 179 GNDTILGSDFNDA---IDGVGGN-NIIFGLGGDDFIRGGDGADSINGNDGNDTIYGGDGD 234
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER--L 344
+ GND+ G G D F + + N + D L E L
Sbjct: 235 DCIRGGQGNDLIFGEGGNDLLFGDKDADILFGVSGNNTMY----GGRGNDSLIGGENDDL 290
Query: 345 RFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQD 378
F D+ D++ + L A + L G D
Sbjct: 291 MFGDKGSDTLVAGGGNNTLYGGADNDFLFGGTGND 325
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 13/118 (11%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ GG++ L GG N + G N + + +VG
Sbjct: 293 GDKGSDTLVAGGGNNTL----YGGADNDF---------LFGGTGNDLLFGDDGNDELVGG 339
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GND + G +++ F GND+ G G D F + L + R + +
Sbjct: 340 KGNDTIFGGPGDDIIFGGDGNDILRGGKGNDRLFGDEGNDLLEGGRGVDTLTGGGGRN 397
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 15/152 (9%)
Query: 198 PKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ IY + + I+ GG+DLL G I +++ G
Sbjct: 220 NGNDGNDTIYGGDGDDCIRGGQGNDLIFGEGGNDLL----FGDKDADILFGVSGNNTMYG 275
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY----- 310
N ++ + + G G+D ++ NN + + ND G +G D F
Sbjct: 276 GRGNDSLIGGENDDLMFGDKGSDTLVAGGGNNTLYGGADNDFLFGGTGNDLLFGDDGNDE 335
Query: 311 --APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I+ I++ D L
Sbjct: 336 LVGGKGNDTIFGGPGDDIIFGG--DGNDILRG 365
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 24/168 (14%)
Query: 230 LLDLTLIGGVKNYID---LNTESWSS-----IGGYEKNMTIAQHTVI---------ESVV 272
D L+ N+I+ L ++ + I + A +V ++V
Sbjct: 2484 TSDFALVTTNGNFINYTRLRDDTLTDEFSYFINDGQGGTATAMISVEWLPRPTNDPQTVT 2543
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +D + G + N+ GND G G D+ S Y + N I Y+ +
Sbjct: 2544 GGEFSDFLTGGAGNDTLIGLGGNDTLSGLGGNDSLVGGLGSD-YLVGGTGNNIFAYETPD 2602
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ AD + + A + L + G +
Sbjct: 2603 DGGGTAFN------ADSTGSITEQIGTGLYDTIADFTGLGEAEGDAIA 2644
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 8/117 (6%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENA 324
VG+ GND ++G+ N+ GN++ G G D IY +
Sbjct: 175 VGTEGNDTILGSDFNDAIDGVGGNNIIFGLGGDDFIRGGDGADSINGNDGNDTIYGGDGD 234
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVF 380
+ + F L F D+ D + V + + + LI D+
Sbjct: 235 DCIRGGQGNDLIFGEGGNDLLFGDKDADILFGVSGNNTMYGGRGNDSLIGGENDDLM 291
>gi|149020731|gb|EDL78536.1| rCG64123 [Rattus norvegicus]
Length = 418
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 62/192 (32%), Gaps = 54/192 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-- 79
W+ + Y T H ++ A WS V LTFE DI
Sbjct: 61 WTKTHLTYSILNYTPHLPR-------KVVEDAIERAFKVWSDVTPLTFERVFEEEGDIVL 113
Query: 80 KFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSHNALHEI 128
F ++G + + +F ++++D + W + A HE+
Sbjct: 114 SFHQGDHGDLYSFNGSKSHFAHAFPPGPGLGGDVHYDLDETWTNNSDNFNLFYVTA-HEL 172
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SY-FMPQDSMMDASFGYCATPMV 185
GH+LGL H +M SY + +D +++
Sbjct: 173 GHSLGLSHSKDEEA-------------------LMFPSYTWNNKDFVLNQ---------- 203
Query: 186 SDIVAVQKIYGA 197
DI +Q +YG
Sbjct: 204 DDISKIQALYGP 215
>gi|150376202|ref|YP_001312798.1| hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
gi|150030749|gb|ABR62865.1| Hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
Length = 1072
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 59/164 (35%), Gaps = 3/164 (1%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I G D D + L + +++ + + +E+V G SG
Sbjct: 35 GGADIINGGAGVDTADYREKA-APIVVTLTGATAATV--FINGVAEDTLANVENVYGGSG 91
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + G++ NN+F GNDV DG G DT Y + + + N +D
Sbjct: 92 DDFITGDALNNLFRGGGGNDVLDGGGGNDTADYTDKTASVVVTLAGATPVTVFVNGIAED 151
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+S+ E + + +IL + L IG D
Sbjct: 152 MISNFENVYGGSGDDILTGDDRDNILRGEVGNDILNGGIGADSL 195
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 8/190 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GS G+ + K S + GG D+LD +Y D ++ G
Sbjct: 253 GSAGDTLTGDAAANKLSGARGNDWLMGGSGADILDGGEDSDTADYSDKQAAIVVALNGGN 312
Query: 258 ------KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ IE++VG SG+D + G++A N F G D DG SG DT +
Sbjct: 313 PVTVTVGGLAEDSIAKIENIVGGSGDDTLSGDAAANTFRGGLGADALDGGSGSDTADFSD 372
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + V +D + ++E + ++ + L
Sbjct: 373 KAQSVVLALNGAIDAVATVGGTAEDSVRNIENIIGGAGNDQLTGDAAANMFRGGLGADVL 432
Query: 372 IQVIGQDVFE 381
G D +
Sbjct: 433 DGAAGSDTAD 442
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 10/203 (4%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF---IQTIYDSGG 227
+ + I ++ I G G++ + + G
Sbjct: 309 NGGNPVTVTVGGLAEDSIAKIENIVG----GSGDDTLSGDAAANTFRGGLGADALDGGSG 364
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D D + + L IE+++G +GND + G++A N
Sbjct: 365 SDTADFSD---KAQSVVLALNGAIDAVATVGGTAEDSVRNIENIIGGAGNDQLTGDAAAN 421
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+F G DV DG++G DT + + + + +D L ++E +
Sbjct: 422 MFRGGLGADVLDGAAGSDTADFSDKTSSLVVTLAGASPATVLVGGIAEDTLRNIENIIGG 481
Query: 348 DQCIDSVNVKQRSILEYTASYED 370
V +++ + A +
Sbjct: 482 SGNDVFVGDGLQNVFDGGAGTDT 504
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 65/235 (27%), Gaps = 14/235 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + I G D D +D+ + +
Sbjct: 792 GASNTFRGALGADFIDGGAGSDTADYREKAAA---VDVTLFGAGDSFVFVGGVAEDTIRN 848
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY---------LYKI 318
IE+V G GND + G+ + N + G D+ G G D A S +
Sbjct: 849 IENVFGGKGNDTLTGDDSANTLNGNDGKDLLTGGGGADILDGGAASDTANYRDKSASVSV 908
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A +D + ++E + ++L + L G D
Sbjct: 909 TLNGAASTAVMVGGVAEDTVRNIENVWGGTGNDSLSGDGNANLLSGGGGSDMLSGGAGAD 968
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+F+ F + + F + L + A+ + Y G E
Sbjct: 969 IFQF--DFALGASNVDMVLDFTAGDRLFLSKSVFTSLSGGSLASNQFYAAAGATE 1021
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 67/193 (34%), Gaps = 8/193 (4%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GS G+ + ++ + T+ G D+LD +Y++ ++ G
Sbjct: 700 GSAGDTLVGDDLANVLLGNDGADTLKGGLGSDVLDGGNGIDTADYLEKADAISVTLNGTT 759
Query: 258 KNMTIAQHT------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ +E+++ SG D ++G+ A+N F + G D DG +G DT Y
Sbjct: 760 NATVLVGGVAEDVIRGVENILAGSGADTLVGDGASNTFRGALGADFIDGGAGSDTADYRE 819
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + F +D + ++E + + L + L
Sbjct: 820 KAAAVDVTLFGAGDSFVFVGGVAEDTIRNIENVFGGKGNDTLTGDDSANTLNGNDGKDLL 879
Query: 372 IQVIGQDVFESMK 384
G D+ +
Sbjct: 880 TGGGGADILDGGA 892
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 70/225 (31%), Gaps = 28/225 (12%)
Query: 189 VAVQKIYGAPKGSLGN--NIYKIEVQQ-----------KDSPFIQTIYDSGGDDLLDLT- 234
A I G + +L N N+Y + + GG+D D T
Sbjct: 67 AATVFINGVAEDTLANVENVYGGSGDDFITGDALNNLFRGGGGNDVLDGGGGNDTADYTD 126
Query: 235 --------LIGGVKNYIDLNT------ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
L G + +N ++ ++ G + + + G GND++
Sbjct: 127 KTASVVVTLAGATPVTVFVNGIAEDMISNFENVYGGSGDDILTGDDRDNILRGEVGNDIL 186
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + F GND DG +G+DTF + + +D + +
Sbjct: 187 NGGIGADSLFGGEGNDTVDGGNGVDTFDLREKTSSVLVQLNGANGATVFVGGVAEDTIRN 246
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
VE + + L + L+ G D+ + +
Sbjct: 247 VENIVGGSAGDTLTGDAAANKLSGARGNDWLMGGSGADILDGGED 291
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 21/190 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQHT 266
+++ G+D +D G + DL ++ S + G
Sbjct: 183 NDILNGGIGADSLFGGEGNDTVDG---GNGVDTFDLREKTSSVLVQLNGANGATVFVGGV 239
Query: 267 V------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--- 317
+E++VG S D + G++A N + GND G SG D S
Sbjct: 240 AEDTIRNVENIVGGSAGDTLTGDAAANKLSGARGNDWLMGGSGADILDGGEDSDTADYSD 299
Query: 318 ------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + +D ++ +E + + + L
Sbjct: 300 KQAAIVVALNGGNPVTVTVGGLAEDSIAKIENIVGGSGDDTLSGDAAANTFRGGLGADAL 359
Query: 372 IQVIGQDVFE 381
G D +
Sbjct: 360 DGGSGSDTAD 369
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 4/131 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+A + +++VG +V++GN + G+DV DG +G+DT Y + +
Sbjct: 697 VAGGSAGDTLVGDDLANVLLGNDGADTLKGGLGSDVLDGGNGIDTADYLEKADAISVTLN 756
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D + VE + V + + + G D
Sbjct: 757 GTTNATVLVGGVAEDVIRGVENILAGSGADTLVGDGASNTFRGALGADFIDGGAGSD--- 813
Query: 382 SMKHFYEFGLS 392
+ E +
Sbjct: 814 -TADYREKAAA 823
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 43/121 (35%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + ++G+ +D + G + +++ G D+ +G +G+DT Y + +
Sbjct: 3 VINGTSGNNILIGTGSDDSLNGLAGDDLLQGLGGADIINGGAGVDTADYREKAAPIVVTL 62
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N +D L++VE + ++ + L G D
Sbjct: 63 TGATAATVFINGVAEDTLANVENVYGGSGDDFITGDALNNLFRGGGGNDVLDGGGGNDTA 122
Query: 381 E 381
+
Sbjct: 123 D 123
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 12/130 (9%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ + G D D + + S + IE+++G SGN
Sbjct: 428 GADVLDGAAGSDTADFSDKTSSLV---VTLAGASPATVLVGGIAEDTLRNIENIIGGSGN 484
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV +G+ NV FDG +G DT Y A + + +D
Sbjct: 485 DVFVGDGLQNV---------FDGGAGTDTADYSASAKAIAVTLNGAIDARVFIGNAAEDT 535
Query: 338 LSDVERLRFA 347
L +VE + +
Sbjct: 536 LRNVESITGS 545
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 8/169 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D +D G + L ++ + IE++ G +G DV+ G+ +
Sbjct: 583 GSDTIDF---GDKTAAVVLTLAGVANTTATVGGVAEDTVRNIENIFGGAGADVLTGDGNS 639
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N +G D DG +G+DT Y + + +D + + E +
Sbjct: 640 NTIRGGAGADGLDGGAGVDTADYRDKVTSVVVTLSGANAALVKVGGLNEDTIRNFENVAG 699
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES-----MKHFYEFG 390
V ++L + L +G DV + + E
Sbjct: 700 GSAGDTLVGDDLANVLLGNDGADTLKGGLGSDVLDGGNGIDTADYLEKA 748
>gi|194219304|ref|XP_001498812.2| PREDICTED: similar to matrix metalloproteinase 25 preproprotein
[Equus caballus]
Length = 599
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 67/210 (31%), Gaps = 50/210 (23%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETS 74
+ L W + ++ + L+ + + AL W V L+F+E
Sbjct: 145 YALSGSVWKKRTLTWRVQSFPQS------SALSQETVRTLMHHALTAWGAVSGLSFQEVG 198
Query: 75 IHS----DIKFISSNNGYVCTPRYDSRYF--------------MEINFDKADVWRYGI-- 114
DI + + + +D + + +FD + W +G
Sbjct: 199 SQGPSEPDILIDFARAYHQDSYPFDGQGGTLAHAFFPGEHPISGDTHFDDEETWTFGSKD 258
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G+GT L A+HE GHALGL H + S+M F
Sbjct: 259 GEGTDLFAVAVHEFGHALGLGHSSVPD-------------------SIMRPFYQGPVGDP 299
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D ++++YG + +
Sbjct: 300 TKYRLSQ----DDREGLEQLYGKAPQTPYD 325
>gi|75677470|ref|NP_001028511.1| matrix metalloproteinase-25 precursor [Mus musculus]
gi|123796969|sp|Q3U435|MMP25_MOUSE RecName: Full=Matrix metalloproteinase-25; Short=MMP-25; Flags:
Precursor
gi|74181785|dbj|BAE32600.1| unnamed protein product [Mus musculus]
gi|109730167|gb|AAI12380.1| Matrix metallopeptidase 25 [Mus musculus]
Length = 615
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 73/208 (35%), Gaps = 50/208 (24%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVAR----WALGEWSKVVD 67
A + R + +S +K LT SF ++L+P ++ R +AL W+
Sbjct: 153 AAGLVRRRRRYSLSGSVWKKRTLTWSIRSFSQKSQLSP---QIVRTLLSYALAVWATESG 209
Query: 68 LTFEETSIHSD-----IKFI---------SSNNGYVCTPRYDSRYFM---EINFDKADVW 110
LTF+E + I F +G + + +FD + W
Sbjct: 210 LTFQEVNSQYQEPDIIIHFARAYHQDSYPFDGSGGTLAHAFFPGEHPISGDTHFDDEETW 269
Query: 111 RYGI--GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+G G L A+HE GHALGL H + N S+M F
Sbjct: 270 TFGSTDDNGIDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQ 310
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYG 196
A++ D +Q++YG
Sbjct: 311 GPVGDPATYRLPQ----DDRDGLQQLYG 334
>gi|85705844|ref|ZP_01036940.1| putative hemolysin-adenlyate cyclase protein [Roseovarius sp. 217]
gi|85669432|gb|EAQ24297.1| putative hemolysin-adenlyate cyclase protein [Roseovarius sp. 217]
Length = 844
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 12/191 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-----SIG 254
G+ G++I+ ++ +GG D +LT G V+ +D + +
Sbjct: 311 GTAGDDIFSFNTASNQ---WISVRGNGGSDTFNLTGAGLVQ--LDFRGTAVTADFVAGTV 365
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N++ TV E + + +D ++G++A+ F + GND DG +G D Y
Sbjct: 366 TQGGNISTVNGTVFE-IRTGNESDSLLGSAADESFRVAGGNDTVDGGAGFDRLRYDDFGV 424
Query: 315 LYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I+ AN D ++++E LR + + + L+ A + L+
Sbjct: 425 TQVNANLATGIVTGTANGLAFTDTIANIEWLRGSTGDDILIGDDAANRLQGRAGDDRLVG 484
Query: 374 VIGQDVFESMK 384
+G D +
Sbjct: 485 GLGNDTIDGEG 495
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 76/205 (37%), Gaps = 25/205 (12%)
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD-----SGGDDLLD---- 232
T + +D VA G ++ +++I + + + D +GG+D +D
Sbjct: 354 TAVTADFVAGTVTQGGNISTVNGTVFEIRTGNESDSLLGSAADESFRVAGGNDTVDGGAG 413
Query: 233 -----LTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + +L T + G TIA IE + GS+G+D++IG+ A
Sbjct: 414 FDRLRYDDFGVTQVNANLATGIVTGTANGLAFTDTIAN---IEWLRGSTGDDILIGDDAA 470
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-------KQDFLS 339
N +G+D G G DT + + V N DF +
Sbjct: 471 NRLQGRAGDDRLVGGLGNDTIDGEGGTDTAVLAVNRADTQVSAINGGIRIISSAGTDFFT 530
Query: 340 DVERLRFADQCIDSVNVKQRSILEY 364
VE +F D + + ++ + +
Sbjct: 531 SVELFQFDDALVSAADLINGAGIPG 555
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 16/157 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGD-----------DLL-----DLTLIGGVKNYIDLN 246
+ I+ + + + SGG+ D L + ++ G N +
Sbjct: 619 DDTIFGNDGNDVLGAGVGNDFASGGNGNDVVAGGANDDTLEGGEGNDSMSGSFGNDLIFG 678
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
IGG TI +SV G G+D ++G ++ +D+ DG +G DT
Sbjct: 679 NGGADDIGGGTGRDTIDAGAGDDSVGGGEGDDSILGGDGSDFLAGGGRDDIIDGGAGNDT 738
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
A + + + + E + D ++D E
Sbjct: 739 INAGAGNDVITGGTGVDQFVFASFFEGEADVVTDFED 775
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/222 (21%), Positives = 75/222 (33%), Gaps = 23/222 (10%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
I + GDD L D TL GG N ID +++ G + N T+ +S+ G
Sbjct: 558 IVGTDGDDSLIGTVNDDTLAGGAGNDNIDSGGGGNNNVSGSDGNDTLFGGPGDDSIGGGF 617
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D + GN N+V GND G +G D A + +++ +
Sbjct: 618 GDDTIFGNDGNDVLGAGVGNDFASGGNGNDVVAGGANDDTLEGGEGNDSM----SGSFGN 673
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D + F + D + + +D + D +F GR
Sbjct: 674 DLI-------FGNGGADDIGGGTGRDTIDAGAGDDSVGGGEGDDSILGGDGSDFLAGGGR 726
Query: 396 DITFDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEG 434
D D D + G+D G ++ EG
Sbjct: 727 DDIIDGG---AGNDTINAGAGNDVITGGTGVDQFVFASFFEG 765
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 42/138 (30%), Gaps = 11/138 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFD----------GSSGLDTFFYYAPSYLYKI 318
E +VG+ G+D +IG ++ +GND D GS G DT F
Sbjct: 556 EEIVGTDGDDSLIGTVNDDTLAGGAGNDNIDSGGGGNNNVSGSDGNDTLFGGPGDDSIG- 614
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
F + I + + + LE + + G D
Sbjct: 615 GGFGDDTIFGNDGNDVLGAGVGNDFASGGNGNDVVAGGANDDTLEGGEGNDSMSGSFGND 674
Query: 379 VFESMKHFYEFGLSEGRD 396
+ + G GRD
Sbjct: 675 LIFGNGGADDIGGGTGRD 692
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 44/163 (26%), Gaps = 29/163 (17%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD------------ 299
+ G N + + + G+ GND + G + N+ +GND+
Sbjct: 179 DLLGGIGNDMLNGLDGDDLLDGAGGNDTLDGGAGNDQLTGGAGNDLIRTGENNPDFGDVV 238
Query: 300 -GSSGLDTFFYYAPSYLYKIYRFENAII-------------VYDANEHKQDFLSDVERLR 345
G SG DT + + + D DVE
Sbjct: 239 IGGSGNDTVDFGGLVDGFVEVSYGGLATPIIATVDGVANTGTVTKGALGTDTFVDVENPM 298
Query: 346 FAD---QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
F+ + I + + I V G ++
Sbjct: 299 FSGFLNGGLRIRGTAGDDIFSFNTASNQWISVRGNGGSDTFNL 341
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 9/79 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFFYYAPSYLYKIY 319
E G+ GND ++G N++ G ND DG +G D A + L +
Sbjct: 169 ELFTGTPGNDDLLGGIGNDMLNGLDGDDLLDGAGGNDTLDGGAGNDQLTGGAGNDLIRTG 228
Query: 320 RFENAIIVYDANEHKQDFL 338
D +
Sbjct: 229 ENNPDFGDVVIGGSGNDTV 247
>gi|72382584|ref|YP_291939.1| hypothetical protein PMN2A_0745 [Prochlorococcus marinus str.
NATL2A]
gi|72002434|gb|AAZ58236.1| hypothetical protein PMN2A_0745 [Prochlorococcus marinus str.
NATL2A]
Length = 615
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 54/141 (38%), Gaps = 17/141 (12%)
Query: 227 GDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
GDD + + L G+ N I I G E N T+ + + + G G D +
Sbjct: 152 GDDTFNGSKKDDKLYSGLGNDI---------IYGNEGNDTLKGESGSDIIKGGDGFDNIY 202
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK---QDFL 338
G + N+ + GND DG SG D Y Y + + + V D K D L
Sbjct: 203 GGTGNDSLHGNDGNDYIDGGSGTDVANYEGNFSDYSFVQDGSNLKVIDNRIGKDKWTDTL 262
Query: 339 SDVERLRFADQCIDSVNVKQR 359
+E L F D+ + Q
Sbjct: 263 VSIELLDFLDKKSVTPVNAQT 283
>gi|149202557|ref|ZP_01879529.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149143839|gb|EDM31873.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 576
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++I + + GG+ ++ G + ID + IGG TI
Sbjct: 370 DSITGGAGNDVVAGGADSDTLQGGEGNDSMSGSFGNDS-IDGGEGAD-DIGGGTGRDTIN 427
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ V G GND + G N+ NDV DG +G DT A + + +
Sbjct: 428 AGAGDDRVGGGEGNDSIFGGDGNDFLAGGGRNDVIDGGAGNDTINAGAGNDVITGGADAD 487
Query: 324 AIIVYDANEHKQDFLSDVER 343
+ + + D ++D E
Sbjct: 488 LFVFSAFFDGESDAITDFED 507
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G G D ++G N+V G+D+ DG G DT Y S +
Sbjct: 183 DLLTGDEGQDTLLGLDGNDVLNGGEGDDLLDGGEGFDTATYNIGSPSEFQITLTETGLRL 242
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVN 355
+ D L ++E++ FA Q + +
Sbjct: 243 ASPSEGVDDLINIEQVEFAGQSVLVSD 269
Score = 44.7 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 80/267 (29%), Gaps = 52/267 (19%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
P + + GGD TLIG N + + + G N T+ + +S+ GS G
Sbjct: 278 PGVFLVAAEGGD-----TLIGTDDNDTLIGEQGHDGLAGGPGNDTLEGNGGNDSISGSDG 332
Query: 277 NDVVIGNSANNVFFESSGNDV------------------FDGSSGLDTFFYYAPSYLYKI 318
ND++ G + N+ G+D G +G D A S +
Sbjct: 333 NDLISGGADNDSIGGGQGDDTIDGGSGDDIIGGGFGADSITGGAGNDVVAGGADSDTLQG 392
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+++ + D + E D R + A + + G D
Sbjct: 393 GEGNDSM----SGSFGNDSIDGGE------GADDIGGGTGRDTINAGAGDDRVGGGEGND 442
Query: 379 VF--ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
F G GR+ D D + G+D G +
Sbjct: 443 SIFGGDGNDFLAGG---GRNDVIDGG---AGNDTINAGAGNDVITG-----------GAD 485
Query: 437 PDAFKALEYIASHEDLINAFADAPDLV 463
D F + D I F D D+
Sbjct: 486 ADLFVFSAFFDGESDAITDFEDGSDIF 512
>gi|298370417|ref|ZP_06981733.1| type I secretion target repeat protein [Neisseria sp. oral taxon
014 str. F0314]
gi|298281877|gb|EFI23366.1| type I secretion target repeat protein [Neisseria sp. oral taxon
014 str. F0314]
Length = 494
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 87/285 (30%), Gaps = 48/285 (16%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG--LMHP 137
KF S G+ T + + + N +G+G + + HE+GHALG
Sbjct: 44 KFSSQGRGFFETKDGKASAYHDPNDRNI---YFGLGSQYVTARILAHEVGHALGRNQAKS 100
Query: 138 GSYNGGYPVYGVDNDYENDSFLTS--VMSYFMPQDSMMDASFGYCATP----------MV 185
Y Y Y + + M + Q + S V
Sbjct: 101 ADYYPTAKSYAQARGYGEAEAIYNEARMVAYEEQRNGRAYSTHISGGLYPQVKGKSYEQV 160
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI-------------------------- 219
D++A + +YG N ++ + D F
Sbjct: 161 KDLLARENMYG--MYPSTNGSVRLSYYENDILFFMHRRTAFEKDFAEAGLRQSDMVGFVK 218
Query: 220 -QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
YD+ GD + G + L ++ + + G+ ND
Sbjct: 219 HMANYDTFGDSRGNNVNANGAFDRQSLLQG--KPTTRLNGGASMYGDAGNDVMTGTKSND 276
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++G S N+ GND+ G++G D + Y+ R++
Sbjct: 277 RMLGGSGNDTLKGGDGNDLLAGNAGKDRLYGGRGYDTYRADRYDT 321
>gi|229529347|ref|ZP_04418737.1| hypothetical protein VCG_002442 [Vibrio cholerae 12129(1)]
gi|229333121|gb|EEN98607.1| hypothetical protein VCG_002442 [Vibrio cholerae 12129(1)]
Length = 2592
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 86/263 (32%), Gaps = 39/263 (14%)
Query: 136 HPGSYNGGYPV---YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y GG V +N + S+ Y+ +++ + T D V
Sbjct: 2290 HPNEYVGGGGVDSFLLNKTHGDNANLNISLSGYWEGGNALGNTVQNVGVT---IDTDLVI 2346
Query: 193 KIYGAPKG------SLGNNIYKIEVQQKDSPF--------------IQTIYDSGG---DD 229
+ N +Y + I D G D
Sbjct: 2347 HSGDSNDYIELGISRADNTVYTGSSIPNSNNSTPPQSTLADSAFMKNDVITDQDGKLLDS 2406
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+L + + + ++L + + ++ G N+ ++++G GND + G + N+
Sbjct: 2407 VLKDSHLQPTTDTVNLGSGND-TVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYL 2465
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVERL 344
GNDV G SG D + + E+ + ++ + DF +++
Sbjct: 2466 SGGRGNDVLRGDSGNDILIGGLGNDILTGGSGEDLFKWVDGDLDNSKDRITDFTIGQDKI 2525
Query: 345 ----RFADQCIDSVNVKQRSILE 363
F+D+ + ++E
Sbjct: 2526 DLSDLFSDETRTLDQLLNSHVIE 2548
>gi|149633271|ref|XP_001509876.1| PREDICTED: similar to collagenase-3 [Ornithorhynchus anatinus]
Length = 641
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 63/349 (18%), Positives = 111/349 (31%), Gaps = 68/349 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W + + Y+ T D+++ + + A WS L F S +DI
Sbjct: 286 WLTHNLTYRITNYTQ-----DLSQETVDQ--AIQGAFKAWSDESLLNFTRISRGTADIMI 338
Query: 82 ISSNN------------GYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
G + R +I+FD ++W K L A HE+
Sbjct: 339 AFGTKEHGDFFPFDGPLGKLAHAFPPGRGLGGDIHFDDDEIWTNDF-KAFNLFAVAAHEL 397
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H S + + Y PQ +++ DI
Sbjct: 398 GHALGLQHSSDPE---------------SLMYPIYKYTHPQGNILSE----------DDI 432
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
++ +YG K +G+ K + + + I + G+ L+ + + L E
Sbjct: 433 KGIRALYGPRKRGIGS---KAPKKCDPNFTVDAITNLRGEKLI-FKDTFFWRQHPQLIEE 488
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---D 305
I + N+ I++ G D+V F D F G D
Sbjct: 489 KALPIHAFWPNLP----HRIDAAYEDPGKDLVF-------IFGG---DKFWALRGHVVLD 534
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + Y + V+D F + + R++D+ +
Sbjct: 535 DYPKGLSELGFPKYIGKIDAAVHDTQAAMTTFFTGNKYWRYSDERLSLE 583
>gi|73955234|ref|XP_546550.2| PREDICTED: similar to Matrilysin precursor (Pump-1 protease)
(Uterine metalloproteinase) (Matrix metalloproteinase-7)
(MMP-7) (Matrin) [Canis familiaris]
Length = 263
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 68/190 (35%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W++ I Y+ T F + +L VA+ AL WSK + L+F +DI
Sbjct: 104 WTSEVITYRIASYTPDLPRFRVNQL------VAK-ALAMWSKEIPLSFRRVPRGTADIMI 156
Query: 82 ISSNNGYVCTPRYDSRY-------------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD+ + W G G A HE+
Sbjct: 157 GFARGAHGDYYPFDGPGNILAHAFAPGPDLGGDAHFDEDERWTDGSRIGINFLIAATHEL 216
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + VM Y P S+ D+ + DI
Sbjct: 217 GHSLGLGHSSDPDA-------------------VM-Y--PTYSIRDSKSFKLSQ---DDI 251
Query: 189 VAVQKIYGAP 198
+QK+YG
Sbjct: 252 EGIQKLYGGN 261
>gi|325205831|gb|ADZ01284.1| iron-regulated protein FrpA [Neisseria meningitidis M04-240196]
Length = 1315
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N +I +++ G GND + G + N+V GND +G G DT A
Sbjct: 918 LNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAG 977
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYT 365
+ + + + QD + + + +RF D + R
Sbjct: 978 NDYLEGGSGSDTYVF--GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLL 1035
Query: 366 ASYED 370
+D
Sbjct: 1036 IKAKD 1040
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1039 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1096
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1097 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1134
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1135 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1192
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1193 GKGFGQDTVYN 1203
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 746 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 805
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 806 YATGRKDIIRFTDGITAD 823
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 63/217 (29%), Gaps = 53/217 (24%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y
Sbjct: 1099 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGY---------- 1148
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFY 387
+ D L+ E L + LI G D E Y
Sbjct: 1149 ---NGNDVLNGGE---------------GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTY 1190
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG----------------- 430
FG G+D ++ ++ D + G AA H+I G
Sbjct: 1191 VFGKGFGQDTVYN--YHVDKNSDTMHFKGF--KAADVHFIRSGSDLVLSASEQDNVRISG 1246
Query: 431 --VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
E D F + S+ D +LVQ
Sbjct: 1247 FFYGENHRVDTFVFDDAAISNPDFAKYINAGNNLVQS 1283
>gi|126327136|ref|XP_001366673.1| PREDICTED: similar to matrix metalloproteinase-27 [Monodelphis
domestica]
Length = 513
Score = 72.5 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 64/192 (33%), Gaps = 52/192 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + + Y+ T D+ +E + AL WSKV LTF S +DI
Sbjct: 106 WRKHSLTYRLLNYTPDMEKSDV-------EEAIQKALEVWSKVTPLTFTRISKGIADIMV 158
Query: 82 ISSNN----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
G+ P + + +FD+ + W G L A
Sbjct: 159 AFRTRAHGKCPRQFDGPLGVLGHAFPPGWGIGG--DTHFDEDENWTKD-SSGFNLFLVAA 215
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H + +M P + +D S +
Sbjct: 216 HEFGHSLGLSHSNDPSA-------------------LM---FPNYAFVDPSKSPLSQ--- 250
Query: 186 SDIVAVQKIYGA 197
DI +Q IYG+
Sbjct: 251 DDIKGIQAIYGS 262
>gi|321462022|gb|EFX73049.1| hypothetical protein DAPPUDRAFT_325673 [Daphnia pulex]
Length = 465
Score = 72.5 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 53/208 (25%)
Query: 15 DHLL--RDQYWSNYFIRYKPDVLTTHRLSFDITELNPN------AQEVARWALGEWSKVV 66
D ++ I K + T + L++ I + P+ +E+A+ A W +V
Sbjct: 88 DQIIPEDSSTQRKRNINNKGNRWTKNELTYGIRKYTPDLEKSVVDREIAK-AFQLWEEVT 146
Query: 67 DLTFEET-SIHSDIKFISSNNGYVCT----------PRYDSRYFM---EINFDKADVWRY 112
LTF + + DI+ + + + Y F + +F+ A+ W
Sbjct: 147 PLTFTFVETGNVDIEISFESGAHSDSRNHDAFHGPGTTYAHAAFPPSGDTHFNDAETWTI 206
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM-SYFMPQDS 171
G L A HE GHALGL H +E+ + VM +Y+
Sbjct: 207 SSD-GINLFQVATHEFGHALGLAH----------------FESKTD---VMFAYY----- 241
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPK 199
D + P +DI +Q++YG
Sbjct: 242 --DYRLNFKLEP--NDINRIQQLYGINN 265
>gi|294675735|ref|YP_003576350.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294474555|gb|ADE83943.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 879
Score = 72.5 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/237 (18%), Positives = 76/237 (32%), Gaps = 34/237 (14%)
Query: 196 GAP--KGSLGNNIYKIEVQ---QKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDL 245
GA G GN+ + ++ +GG+D L TL+GG N + L
Sbjct: 584 GANRMNGGTGNDTLTGGEDFDVLNGAAGADSLVGNGGNDTLLGDIGRDTLLGGAGNDV-L 642
Query: 246 NTESWSSI----------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
N+ + GG N T+ +++ G +GND + G + NV +G
Sbjct: 643 NSGGDDDLLSGGEGEDVLGGGAGNDTLLGDAGNDTLRGDAGNDRIEGGAGLNVLSGGAGA 702
Query: 296 DVFDGSSGLDTFFYYAPSY---LYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQ 349
D G +G DT + + + + D L + LR
Sbjct: 703 DTLLGGAGNDTLYGGSETGTPEDLADSLSGGGGNDALSGGAGADTLRGGSHNDTLRGGSG 762
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVF------ESMKHFYEFGLSEGRDITFD 400
L + + G+D F + + +E R + F+
Sbjct: 763 ADLLDGGDGDDWLFGEGGNDLMTGGAGKDAFLHDGSLGAGTDWISDYSAEDR-LVFN 818
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 14/179 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS----IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G+ ++ +L GG+ I +T S+ I G E + I + + G GND + G
Sbjct: 513 GERIVADSLGGGLSGTIGRDTLIGSNRADTIRGLESSDMIQGGGGNDVIFGDRGNDTIAG 572
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFY--------YAPSYLYKIYRFENAIIVYDANEHK 334
N ++ G + +G +G DT A + N ++ D
Sbjct: 573 NDGDDSLIGGEGANRMNGGTGNDTLTGGEDFDVLNGAAGADSLVGNGGNDTLLGDIGRDT 632
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGL 391
+ + L + +L A + L+ G D ++ E G
Sbjct: 633 LLGGAGNDVLNSGGDDDLLSGGEGEDVLGGGAGNDTLLGDAGNDTLRGDAGNDRIEGGA 691
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 50/143 (34%), Gaps = 20/143 (13%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ G+D L G DL S+ G N ++ +++ G
Sbjct: 697 SGGAGADTLLGGAGNDTLYGGSETGTPE--DLAD----SLSGGGGNDALSGGAGADTLRG 750
Query: 274 SSGNDVVIGNSANNVFFES---------SGNDVFDGSSGLDTFF----YYAPSYLYKIYR 320
S ND + G S ++ GND+ G +G D F A + Y
Sbjct: 751 GSHNDTLRGGSGADLLDGGDGDDWLFGEGGNDLMTGGAGKDAFLHDGSLGAGTDWISDYS 810
Query: 321 FENAIIVYDANEHKQDF-LSDVE 342
E+ ++ + + DF L V+
Sbjct: 811 AEDRLVFNNGSARISDFGLRWVD 833
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDG 300
IDL + G ++ + + +V ++G D ++G + +V G+ V G
Sbjct: 360 RIDLAALGVTVTGAASGSLRRDGSALDDLLVANTTGRDTLMGLAGEDVLVSGPGSTVMFG 419
Query: 301 SSGLDTFFYYAPSYLYKIYRFENA 324
+G DTF + + + +
Sbjct: 420 GAGNDTFVIRSSETRHYVMDYSPG 443
>gi|119488695|ref|ZP_01621704.1| Hemolysin-type calcium-binding region [Lyngbya sp. PCC 8106]
gi|119455118|gb|EAW36259.1| Hemolysin-type calcium-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 72.5 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPD-AFKALEYIASHEDL 452
+ FD YL + D+ G+ H++ G EGR P F Y+ + D+
Sbjct: 2 TTLNFDENTYLQQHSDVAEAVAEGRLGSGYEHWVKFGFNEGRTPQIPFNEQFYLDFNPDV 61
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFV 481
A + + G +H++ FG E R
Sbjct: 62 TEAVTNGNFV--TGFEHYALFGASENRAS 88
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 537
+ FD YL + D+ R G+ H++ G EGR P F Y+ + D+
Sbjct: 3 TLNFDENTYLQQHSDVAEAVAEGRLGSGYEHWVKFGFNEGRTPQIPFNEQFYLDFNPDVT 62
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRS 564
A + + G +H++ FG E R+
Sbjct: 63 EAVTNGNFV--TGFEHYALFGASENRA 87
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Query: 358 QRSILEYTASYEDLIQVIGQDV-FESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y + D+ + + + +H+ +FG +EGR F+ YL D+
Sbjct: 5 NFDENTYLQQHSDVAEAVAEGRLGSGYEHWVKFGFNEGRTPQIPFNEQFYLDFNPDVTEA 64
Query: 415 FG-SDRGAAARHYITHGVKEGR 435
+ HY G E R
Sbjct: 65 VTNGNFVTGFEHYALFGASENR 86
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDL-R 496
F Y+ H D+ A A+ + G +H+ FG EGR F+ YL D+
Sbjct: 6 FDENTYLQQHSDVAEAVAEG--RLGSGYEHWVKFGFNEGRTPQIPFNEQFYLDFNPDVTE 63
Query: 497 NVFGSDRGAAARHYITHGVKEGR 519
V + HY G E R
Sbjct: 64 AVTNGNFVTGFEHYALFGASENR 86
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWN 581
F Y+ H D+ A A+ + +G +H+ FG+ EGR+ FN YL D+
Sbjct: 6 FDENTYLQQHSDVAEAVAEG--RLGSGYEHWVKFGFNEGRTPQIPFNEQFYLDFNPDVTE 63
Query: 582 VFGSDR-SAAAQHYITHGMKEGRAL 605
+ +HY G E RA
Sbjct: 64 AVTNGNFVTGFEHYALFGASENRAS 88
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGRALGIS 608
++ F+ + YL + D+ R + +H++ G EGR I
Sbjct: 3 TLNFDENTYLQQHSDVAEAVAEGRLGSGYEHWVKFGFNEGRTPQIP 48
>gi|19424154|ref|NP_598198.1| stromelysin-2 precursor [Rattus norvegicus]
gi|116870|sp|P07152|MMP10_RAT RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
metalloproteinase-10; Short=MMP-10; AltName:
Full=Transformation-associated protein 34A; AltName:
Full=Transin-2; Flags: Precursor
gi|57389|emb|CAA28739.1| unnamed protein product [Rattus norvegicus]
gi|207151|gb|AAA42202.1| transformation-associated protein [Rattus norvegicus]
Length = 476
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 59/190 (31%), Gaps = 48/190 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI-- 79
W I Y+ T + AL W +V LTF S +DI
Sbjct: 109 WRKNHISYRIVNYTLDLPRESV-------DSAIERALKVWEEVTPLTFSRISEGEADIMI 161
Query: 80 KFISSNNGYVC---------TPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F +G Y ++ + +FD + W G GT L A HE+
Sbjct: 162 SFAVGEHGDFYPFDGVGQSLAHAYPPGPGFYGDAHFDDDEKWSLGP-SGTNLFLVAAHEL 220
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H + YPVY N D
Sbjct: 221 GHSLGLFHSNNKESLMYPVYRFSTSQANIRLS-------------------------QDD 255
Query: 188 IVAVQKIYGA 197
I +Q +YGA
Sbjct: 256 IEGIQSLYGA 265
>gi|301610871|ref|XP_002934976.1| PREDICTED: matrix metalloproteinase-18-like [Xenopus (Silurana)
tropicalis]
Length = 481
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 64/197 (32%), Gaps = 49/197 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
+ W + Y+ T D+ A WS VV LTF SD
Sbjct: 125 NAVWKKKDLTYRILNYTPDMTRNDV-------DRAIEKAFKVWSDVVPLTFTRIYDRVSD 177
Query: 79 IKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNAL 125
I+ + + + + +D + +++FD+ + W G GT L A
Sbjct: 178 IEMLFAYRDHKDSLPFDGPSGILAHAFAPGDNIGGDVHFDEDERWTSGSA-GTNLFLVAA 236
Query: 126 HEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H N YP Y Y P +
Sbjct: 237 HELGHSLGLDHSNDPNALMYPTYH----------------YINPNTFQLPQ--------- 271
Query: 185 VSDIVAVQKIYGAPKGS 201
DI + +YG +
Sbjct: 272 -DDINGIHSLYGTKENP 287
>gi|35903119|ref|NP_919397.1| matrix metalloproteinase-14 [Danio rerio]
gi|32251076|gb|AAP74483.1| membrane-type matrix metalloproteinase 1 alpha [Danio rerio]
gi|124297207|gb|AAI31865.1| Matrix metalloproteinase 14 (membrane-inserted) alpha [Danio rerio]
Length = 574
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 50/164 (30%), Gaps = 31/164 (18%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
++ + W + + T E + A W V L F E
Sbjct: 110 YVAQGSKWDKREVTFSIQNYTPKVGER-------ATHEAIKKAFRVWEAVTPLKFREIPY 162
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD+A+ W G
Sbjct: 163 SQINGKVEKFADIMLFFAEGFHGDSTPFDGEGGFLAHAYFPGHGIGGDTHFDEAEPWTTG 222
Query: 114 --IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H G + + D EN
Sbjct: 223 NVDKGGNDVFLVAVHELGHALGLEHSGDPSAIMAPFYQWMDTEN 266
>gi|297690073|ref|XP_002822451.1| PREDICTED: macrophage metalloelastase-like [Pongo abelii]
Length = 470
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 52/162 (32%), Gaps = 40/162 (24%)
Query: 54 VARWALGEWSKVVDLTF----EETSI---------HSDIKFISSNNGYVCTPRYDSRYFM 100
R A WS V L F + H D G +
Sbjct: 133 AIRKAFQVWSNVTPLKFSKIHTGVADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIG 192
Query: 101 -EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ +FD+ + W +GT L A+HEIGH+LGL H P + Y+
Sbjct: 193 GDAHFDEDEFWT-THSEGTNLFLTAVHEIGHSLGLGHSSD-----PKAIMFPTYK----- 241
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
Y + A DI +Q +YG PK +
Sbjct: 242 -----YVDINTFRLSA----------DDIRGIQSLYGDPKEN 268
>gi|56708941|ref|YP_164986.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56680626|gb|AAV97291.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 1478
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S ++ + +G D + GN N+V GND +G +G D +
Sbjct: 177 SGNNPATNDLLWGRGNGSNYFKSGNGTDYLYGNGGNDVLEGGGGNDSVNGGTGTDRAVFS 236
Query: 311 APSYLYKIYRFENAIIVYDAN----EHKQDFLSDVERLRFADQCIDSVNVKQR 359
Y I N I N D L DVE RFAD ++ +
Sbjct: 237 GNCSDYTITSNANGTITIADNRANSPDGTDTLKDVEYARFADGEMNLTTGEFA 289
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N T+ + +++ G GND V G + GND DG G DT + S
Sbjct: 671 GREGNDTVNGNGGNDTLNGGLGNDAVNGGEGADQLSGGGGNDTLDGGDGTDTAVFDLTSA 730
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ--RSILEYTASYEDLI 372
+ ++A+ V L ++E +RF D+ + +++ L T + L
Sbjct: 731 SASVDGPDDALRVDTG--QGIVTLRNIEFVRFTDRTFNLTDLQALRDQTLIGTPGNDTLR 788
Query: 373 QVIGQD 378
G D
Sbjct: 789 GSYGND 794
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 12/161 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ Q I I S G D D +L G +SIGG N TI+ +
Sbjct: 509 DPSQAAQNVIAAINASSGTD-GDDSLTGDDNP---------NSIGGLAGNDTISGAGGND 558
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+DV+ G + ++ ++G D DG + DT A S I + I +
Sbjct: 559 TLSGGPGDDVLNGGAGDDSLRGNAGYDTVDGGADTDTVVVNANSTDVNIIGSSDPITIQS 618
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +S+VE +RF D+ + + + + D
Sbjct: 619 PDGDV--VISNVEFVRFLDRTMAVSTLATLTTVNTFGGRGD 657
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 55/179 (30%), Gaps = 24/179 (13%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI- 253
YG + + + + Y G D + G +L + +
Sbjct: 1294 YGDDGQNDFRGLGDFDWFVSSDGGRERYYGGDGVDTVTYFNAPGA-VTANLRNGAVVNGN 1352
Query: 254 -GGYEKNMTIAQHT--VIESVVGSS------------------GNDVVIGNSANNVFFES 292
GY A+ IE++VGS+ G+D + G +
Sbjct: 1353 ESGYGTQGWAARDLYFEIENLVGSNFGDHLTGSADRNQLSGLDGDDFLFGFGNIDYLKGG 1412
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+GND DG D + Y + R + D L DVE RF DQ +
Sbjct: 1413 AGNDTIDGGGSSDYALFDGDLVDYTLTRTAENRVTV-VGPDGNDSLIDVEYFRFDDQDV 1470
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 19/179 (10%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
FIQ + + G ++ L GG + SS N++ A +
Sbjct: 940 STSGRDSFIQHTFAADGTYIIALQRYGG---------GTISSTQMATLNIS-ATGVTVPP 989
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII---- 326
V + N ++ G + N+ G+D G G D+ A S + + +
Sbjct: 990 VTTTDAN-LLDGGADNDTLEGGGGDDTLIGGLGDDSMTGGAGSDTAILATSQQFVSGQNV 1048
Query: 327 ---VYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
V + DFL SD+E ++F D + + +A
Sbjct: 1049 TGGVQLTSSQGVDFLGSDIEFVQFNDGTLTLAQAAALAGTVPSAINGTNAGEAVDGTTA 1107
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 52/173 (30%), Gaps = 40/173 (23%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ GN+ + GG+D LD G DL + S S + G
Sbjct: 679 NGNGGNDTLNGGLGNDAVNGGEGADQLSGGGGNDTLDG-GDGTDTAVFDLTSASAS-VDG 736
Query: 256 YEKNMTIAQHTVI-----------------------------------ESVVGSSGNDVV 280
+ + + I +++ GS GND +
Sbjct: 737 PDDALRVDTGQGIVTLRNIEFVRFTDRTFNLTDLQALRDQTLIGTPGNDTLRGSYGNDTI 796
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G ++ NDV + G DT L ++ + +V + +
Sbjct: 797 LGLDGDDELDGGLDNDVLNSGEGQDTLLGGPGDDLLRVTQTIAPTVVDNTVSN 849
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 7/129 (5%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-------YAPS 313
I E+V G++ +++ G + G+D DG G D + +
Sbjct: 1092 AINGTNAGEAVDGTTATEIINGLEGADWISPGGGSDTVDGGPGNDMLSFFNLPDTPGRTN 1151
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
Y++ A + ++ +++ERL + Y+ ++
Sbjct: 1152 LDYRLTIDMGAGTAVSHDGAERIQFANIERLTGTIFADHITGSSSDDYIRGLGDYDWIVA 1211
Query: 374 VIGQDVFES 382
G D +
Sbjct: 1212 TEGADTIDG 1220
Score = 38.6 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 43/142 (30%), Gaps = 15/142 (10%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ G + + + + GG D +D + ++ +L +
Sbjct: 1094 NGTNAGEAVDGTTATEIINGLEGADWISPGGGSDTVDGGPGNDMLSFFNLPDTPGRTNLD 1153
Query: 256 YEKNMTIAQHTV-------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
Y + + T IE + G+ D + G+S+++ D +
Sbjct: 1154 YRLTIDMGAGTAVSHDGAERIQFANIERLTGTIFADHITGSSSDDYIRGLGDYDWIVATE 1213
Query: 303 GLDTFFYYAPSYLYKIYRFENA 324
G DT + ++N
Sbjct: 1214 GADTIDGGNGQDMISFLEWQNT 1235
>gi|149201403|ref|ZP_01878378.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149145736|gb|EDM33762.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 611
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 10/145 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN++ T+ G+D ++ G N + IGG
Sbjct: 408 TGGAGNDVIAGGADN------DTLSGGDGND----SVSGSFGNDLIFGNGGADDIGGGTG 457
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
TI + V G G+D + G N+ ND DG +G DT A +
Sbjct: 458 RDTIDAGAGDDRVGGGEGDDSISGGDGNDFLAGGGRNDTIDGGAGSDTINAGAGNDTITG 517
Query: 319 YRFENAIIVYDANEHKQDFLSDVER 343
+ + + + D ++D E
Sbjct: 518 GVDADLFVFSSFFDGEADVITDFED 542
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 67/388 (17%), Positives = 114/388 (29%), Gaps = 98/388 (25%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITEL-NPNAQEVARWALGEWSKVVDLTFEETSIHS----- 77
S I + D S D + + + R A EWS+ D+ F +
Sbjct: 28 SGQDIYWFTDEDPGTSFSVDPASVYTFDVEAALRLAFAEWSRYGDIEFLQVQDPGGAAGG 87
Query: 78 ----DIKFISSNNGYVCTPRYDSRYFMEINFDKA---DVWRYGIGKGTILSHNALHEIGH 130
DI+ + +E+ DV + A+HEIGH
Sbjct: 88 QIDPDIRIFFAPIPGNTLGFAFFPSPLEVPIAGDILLDVDASLNFDVPLFEGLAIHEIGH 147
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+LGL H + ++M P + D + DI
Sbjct: 148 SLGLEHI-------------------ETVAAIM---NPILTQPDI--------LADDISG 177
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+++IYGA G+ +Y + +D + N E
Sbjct: 178 IRQIYGAQDGAA--VVYTMPTGLRDLTLLH-------------------------NPEDL 210
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ +G N + G+ ++ + G N+ +G+D+ G G D +
Sbjct: 211 TVLGNNFGN----------RITGTDADETLNGLVGNDTLDGGAGDDLLIGGVGNDWAEFS 260
Query: 311 A-PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI---------------DSV 354
EN + V + D L D+E ++F D+ I +
Sbjct: 261 TIARSAAAFSVVENGLQV--VSSLGTDTLIDIEWIQFLDESIRVAEVITAISGPIGLQLI 318
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFES 382
L T + L G DV
Sbjct: 319 GSGLSDSLMGTDDNDTLSGGAGDDVLAG 346
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 19/151 (12%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE------------------SS 293
S+ G + N I+ + V G GND + G N+ +
Sbjct: 352 SLDGGDGNDRISASDGNDIVFGGLGNDSIGGGLGNDTIDGGAGDDIIGGGFGADSITGGA 411
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GNDV G + DT + F N +I + + + +
Sbjct: 412 GNDVIAGGADNDTLSGGDGNDSVS-GSFGNDLIFGNGGADDIGGGTGRDTIDAGAGDDRV 470
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + L D +
Sbjct: 471 GGGEGDDSISGGDGNDFLAGGGRNDTIDGGA 501
>gi|307151307|ref|YP_003886691.1| proprotein convertase P [Cyanothece sp. PCC 7822]
gi|306981535|gb|ADN13416.1| proprotein convertase P [Cyanothece sp. PCC 7822]
Length = 814
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 4/131 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + ++ ++++G GNDV++GN+ +++ G+D +G +G DT Y
Sbjct: 314 SIDGGSGDDSLDGRYGNDTLIGGIGNDVLLGNAGDDILKGGVGDDTLNGGAGNDTVDYSD 373
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + N D LS +E + + + L A + L
Sbjct: 374 ATDVVAV----NLKTGLATGGAGNDSLSSIEAVIGSKFDDSLYGGNGDNTLNGGAGNDTL 429
Query: 372 IQVIGQDVFES 382
+G D +
Sbjct: 430 RGGLGNDYLDG 440
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 15/150 (10%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D +D + V ++L T G N ++ + IE+V+GS +D
Sbjct: 358 DTLNGGAGNDTVDYSDATDVVA-VNLKTGL---ATGGAGNDSL---SSIEAVIGSKFDDS 410
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-----DANEHK 334
+ G + +N +GND G G D + V +
Sbjct: 411 LYGGNGDNTLNGGAGNDTLRGGLGNDYLDGERGHNTADYSDATAGVYVDLSFGWVSGGAG 470
Query: 335 QDFLSDVERLR---FADQCIDSVNVKQRSI 361
DFL +++ + F D + + I
Sbjct: 471 DDFLYNIQAVIGSKFNDTIYNDGLLDNTLI 500
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IESV 271
+ T+ G+D LD + +Y + ++ ++ IE V
Sbjct: 524 QGEAGNDTLIGGAGNDTLDGGVGTDTVSYAYVAAAVNVNLSTGTATGGDGTDSLWAIEGV 583
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+GSS ND + G+ N+ G+D DG +G D Y + +
Sbjct: 584 IGSSFNDSLTGSMGNDTLNGGLGDDSLDGGAGTDIASYVDATAAVNV 630
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 49/180 (27%), Gaps = 20/180 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
S T+ GDD LD + +Y+D ++ ++
Sbjct: 587 SFNDSLTGSMGNDTLNGGLGDDSLDGGAGTDIASYVDATAAVNVNLSTGTATGGDGTDSL 646
Query: 268 --IESVVGSSGNDVVIG------------------NSANNVFFESSGNDVFDGSSGLDTF 307
IE V+GSS ND + G + + G+D+ G G D
Sbjct: 647 WAIEGVIGSSFNDTLTGSTGNDLLLGGLGNDSLNGGAGKDTLTGGEGDDLLIGGLGNDKL 706
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + I Q V F I V + + T +
Sbjct: 707 TGGTGADQFIFNSASEGIDTLSDFTVSQGDKIVVSAAGFGGSLIAGVPISATQWVLGTTA 766
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 19/140 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G ++ I + + G +G+D + G+S N+ GND +G +G+++ Y
Sbjct: 5 MGTPFNDILIGTGDP-DFLYGLAGDDSIDGDSGNDTLNGGGGNDFLEGGAGINSADYSDA 63
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSIL------- 362
+ + + A D LS+++ + F D ++V +++
Sbjct: 64 AAAVTV----DLDAGSAAGGAGHDTLSNIQIVIGSAFNDSLYADLSVNNNTLVGGAGDDR 119
Query: 363 ----EYTASYEDLIQVIGQD 378
Y +S L +G D
Sbjct: 120 LDLGYYNSSNNQLQGGVGND 139
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 26/203 (12%)
Query: 195 YGAPKGSLGNNIYKI-EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNT 247
YG G+ ++ + I T+ GDD L D+ G + +D +
Sbjct: 196 YGNNYLDGGDGNDRLMVGESFGGRGIATLIGGAGDDTLITASGNDILDGGTGFDIVDYSQ 255
Query: 248 ESWS--SIGGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSA---------------NNVF 289
++ ++ N+ + + ++ S ND ++G+S+ ++
Sbjct: 256 GAYITLNMAVTVTNVEKVIGSHYDDIILGSADNDTILGSSSSYVPKGGIWNPPPSDDDSI 315
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
SG+D DG G DT + + + + I+ + + + + + ++D
Sbjct: 316 DGGSGDDSLDGRYGNDTLIGGIGNDVL-LGNAGDDILKGGVGDDTLNGGAGNDTVDYSDA 374
Query: 350 CIDSVNVKQRSILEYTASYEDLI 372
+ + A + L
Sbjct: 375 TDVVAVNLKTGLATGGAGNDSLS 397
>gi|168984487|emb|CAI24737.2| matrix metalloproteinase 28 (epilysin) [Mus musculus]
Length = 407
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 56/198 (28%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGRS 290
>gi|332264806|ref|XP_003281419.1| PREDICTED: matrix metalloproteinase-28 [Nomascus leucogenys]
Length = 520
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 58/198 (29%), Gaps = 49/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW-------------------------- 273
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 274 -DDVLAVQSLYGKPLGGS 290
>gi|298291346|ref|YP_003693285.1| glycosyl transferase family 2 [Starkeya novella DSM 506]
gi|296927857|gb|ADH88666.1| glycosyl transferase family 2 [Starkeya novella DSM 506]
Length = 608
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 62/207 (29%), Gaps = 29/207 (14%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 452
G+ FD YL + + F RHY+ G + G P F A Y++++ D+
Sbjct: 30 GQSGLFDEAWYLEQHPE----FIGPYAQPLRHYLEIGWRRGDAPSPYFDAAHYLSANPDV 85
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A + H+ FG EGR + D + A Y
Sbjct: 86 AAAGVNP-------LLHYVRFGRNEGRAMRAMPQT------DAADDIAFSVILAT--YNR 130
Query: 513 HGVKEG--RNPDAFKALEYIASHEDLINAFADAPDL-------VQAGKDHFSNFGYEEGR 563
G+ E R+ A + D +A + G+ + F G
Sbjct: 131 AGIIEDSIRSILAQTHRNFELIIVDDGSADGTEALVRERFAAEFADGRITYIRFSRNLGV 190
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAA 590
S N L + V +
Sbjct: 191 SAARNAGLLAARNPWIAYVDSDNVVDP 217
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 13/86 (15%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDD 578
F Y+ H + I +A H+ G+ G S F+ YL++ D
Sbjct: 32 SGLFDEAWYLEQHPEFIGPYAQP-------LRHYLEIGWRRGDAPSPYFDAAHYLSANPD 84
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRA 604
+ HY+ G EGRA
Sbjct: 85 VAAA----GVNPLLHYVRFGRNEGRA 106
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 24/193 (12%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y + + I Q ++H+ E G G + FD+ YL + D+
Sbjct: 40 YLEQHPEFIGPYAQ----PLRHYLEIGWRRGDAPSPYFDAAHYLSANPDVAAA----GVN 91
Query: 422 AARHYITHGVKEGR------NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
HY+ G EGR DA + + +I A + +++
Sbjct: 92 PLLHYVRFGRNEGRAMRAMPQTDAADDIAF-----SVILATYNRAGIIEDSIRSILAQTH 146
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
+ D G+ +R F ++ YI G A + +A+
Sbjct: 147 RNFELIIVDDGSADGTEALVRERFAAEFADGRITYIRFSRNLG--VSAARNAGLLAARNP 204
Query: 536 LINAFADAPDLVQ 548
I A+ D+ ++V
Sbjct: 205 WI-AYVDSDNVVD 216
>gi|170577182|ref|XP_001893913.1| Matrixin family protein [Brugia malayi]
gi|158599789|gb|EDP37251.1| Matrixin family protein [Brugia malayi]
Length = 318
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 65/194 (33%), Gaps = 47/194 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIHSDIKF 81
W + Y + LT +EL+ + ++ + A WS V +T E S +DI
Sbjct: 25 WEKSDLTYSIESLT--------SELSESEVRDALKKAFDTWSAVTRITLNEISEKADITI 76
Query: 82 IS-----------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG------TILSHNA 124
G + + ++FD + W Y T + A
Sbjct: 77 AFARRMHNDPWPFDGEGGILAHATLPSSGI-LHFDSDEKWVYMNSDAISRYDTTDVLQVA 135
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HEIGH LGL H + S+M F D++ +
Sbjct: 136 IHEIGHVLGLEHSADSD-------------------SIMLPFYR-DTVDNRGNYITPKLS 175
Query: 185 VSDIVAVQKIYGAP 198
SD+ +Q +YG
Sbjct: 176 ASDVRNIQYLYGIN 189
>gi|332846033|ref|XP_001150678.2| PREDICTED: matrix metalloproteinase-15 isoform 1 [Pan troglodytes]
Length = 669
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 66/209 (31%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + T + ++ E R A W + L F+E
Sbjct: 132 YALTGRKWNNHHXTFSIQNYTEKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 184
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 185 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 244
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + N +M+ F
Sbjct: 245 STDLHGNNLFLVAVHELGHALGLEHSSNPNA-------------------IMAPFYQWKD 285
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 286 IDNFK------LPEDDLRGIQQLYGTPDG 308
>gi|325206566|gb|ADZ02019.1| iron-regulated protein FrpA [Neisseria meningitidis M04-240196]
Length = 1302
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N +I +++ G GND + G + N+V GND +G G DT A
Sbjct: 905 LNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAG 964
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYT 365
+ + + + QD + + + +RF D + R
Sbjct: 965 NDYLEGGSGSDTYVF--GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLL 1022
Query: 366 ASYED 370
+D
Sbjct: 1023 IKAKD 1027
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1026 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1083
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1084 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1121
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1122 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1179
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1180 GKGFGQDTVYN 1190
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 733 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 792
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 793 YATGRKDIIRFTDGITAD 810
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y
Sbjct: 1086 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGY---------- 1135
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFY 387
+ D L+ E L + LI G D E Y
Sbjct: 1136 ---NGNDVLNGGE---------------GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTY 1177
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
FG G+D ++ ++ D + G AA H+I G
Sbjct: 1178 VFGKGFGQDTVYN--YHVDKNSDTMHFKGF--KAADVHFIRSG 1216
>gi|114706018|ref|ZP_01438921.1| Glycerophosphoryl diester phosphodiesterase [Fulvimarina pelagi
HTCC2506]
gi|114538864|gb|EAU41985.1| Glycerophosphoryl diester phosphodiesterase [Fulvimarina pelagi
HTCC2506]
Length = 847
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 19/157 (12%)
Query: 188 IVAVQKIYGAPK---GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
I ++ + G G+ G++I +P + + GGDD++ G N +
Sbjct: 324 IAHLRILPGTDNEIVGTDGDDI------LLGTPLVDVMDGRGGDDII----YGRESNDV- 372
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ S + + G + + TI + + G SGNDV+ G +++ + G+DV DG +G
Sbjct: 373 IYGGSGNDRLIGGDGDDTIYGGAGNDILFGGSGNDVLFGEDGDDILYGEEGDDVLDGGAG 432
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
DT + A + ++A+ + D L
Sbjct: 433 NDTLYGGAGNDALDGGSGDDALY----GDAGDDVLEG 465
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 15/169 (8%)
Query: 231 LDLTLIGGVKNYI-DLN--TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D++ I L + + I G + + + +++ + G G+D++ G +N+
Sbjct: 312 YDVSDGTEAVQQIAHLRILPGTDNEIVGTDGDDILLGTPLVDVMDGRGGDDIIYGRESND 371
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
V + SGND G G DT + A + + F + E D L E
Sbjct: 372 VIYGGSGNDRLIGGDGDDTIYGGAGNDIL----FGGSGNDVLFGEDGDDILYGEE----- 422
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
L A + L G D ++ E G E
Sbjct: 423 -GDDVLDGGAGNDTLYGGAGNDALDGGSGDDALYGDAGDDVLEGGTGED 470
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D + +YG G++ + G D LDL + + + IDL
Sbjct: 636 DDAGIDYLYGGE----GDD----HFYAISDGVVDEYRGGEGSDTLDLGDL-ILDSLIDLP 686
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ + + AQ IE+VVG G+D ++ ++ NV + G+D+F
Sbjct: 687 NGTL-----WIADQEEAQFFEIENVVGGRGHDRLVADADVNVMVGNGGDDIF 733
>gi|312114310|ref|YP_004011906.1| peptidase M10A and M12B matrixin and adamalysin [Rhodomicrobium
vannielii ATCC 17100]
gi|311219439|gb|ADP70807.1| peptidase M10A and M12B matrixin and adamalysin [Rhodomicrobium
vannielii ATCC 17100]
Length = 254
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 55/193 (28%), Gaps = 70/193 (36%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIH--SDIKFISSNN----GYVCTPRYDSRYFMEI 102
A+ R AL W V ++TFEE S + I ++N+ + +
Sbjct: 88 EAAKTELREALRTWESVANITFEEVSDPSRAQIVIGAANDPGGRAFANLSYRSGKGIPTP 147
Query: 103 N------------------FDKAD---------------VWRYGIGKG---TILSHNALH 126
D D W+ G L H H
Sbjct: 148 VTMALGKPGVPAPAERAPIVDDGDSVAIDQAYVCLNPKSPWKVGFDGNLNVYDLRHTFTH 207
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GHA+GL HP + +M Y + T S
Sbjct: 208 EVGHAIGLDHPDATGA-------------------IMGYRYDER---------VRTLQQS 239
Query: 187 DIVAVQKIYGAPK 199
DI VQ++YG
Sbjct: 240 DITGVQRLYGVAT 252
>gi|187606698|emb|CAP19940.1| matrix metallopeptidase 13 [Sparus aurata]
Length = 269
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ + T + E++ + AL W+KV L F S +DI
Sbjct: 107 WKKNSLTYRIENYT---PDMSVAEVD----DSIEKALQVWAKVTPLRFTRIYSDTADIMI 159
Query: 82 ISS------NNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + F + +FD+ + + + G +L A HE
Sbjct: 160 SFGRLSHGDSYPFDGPDGTLAHAFAPAPGLGGDAHFDEDETFTFRSNTGYVLFMVAAHEF 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + + SY P SF DI
Sbjct: 220 GHSLGLSHSDDPGA---------------LMYPIYSYHNPD------SFALPR----DDI 254
Query: 189 VAVQKIYGAP 198
+Q +YG
Sbjct: 255 NGIQSLYGPN 264
>gi|115896326|ref|XP_785149.2| PREDICTED: similar to pre-pro-hatching enzyme [Strongylocentrotus
purpuratus]
gi|115970805|ref|XP_001189011.1| PREDICTED: similar to pre-pro-hatching enzyme [Strongylocentrotus
purpuratus]
Length = 347
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 59/196 (30%), Gaps = 55/196 (28%)
Query: 22 YWSNYFIRYKP----DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
W + + Y+ D + R +V R A+ W V L E
Sbjct: 135 RWYDLNLTYRIVELHDNMPLGRQVIG---------DVVRDAMQMWMDVTSLILCEVVDQN 185
Query: 77 --SDIKF-----------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+DI G + + EI+FD A+ W GI G
Sbjct: 186 IDADIHIRHVLGEHGDGISFDGPGGILGHAFLPT-HGEIHFDAAENWTVGIADGIDYVQV 244
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+HEIGHALGL H G S+M F F
Sbjct: 245 VVHEIGHALGLTHSGVEG-------------------SIMYPF--------YQFRPKVEL 277
Query: 184 MVSDIVAVQKIYGAPK 199
DI +Q +YG P
Sbjct: 278 QDDDIQGIQLLYGTPN 293
>gi|293339906|ref|XP_001055465.2| PREDICTED: matrix metalloproteinase 25 [Rattus norvegicus]
Length = 615
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 70/212 (33%), Gaps = 55/212 (25%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFE 71
+ L W + + ++ + +Q V R +AL W+ LTF+
Sbjct: 162 YTLSGSVWKKRTLTWSIQ---------SFSQSSRLSQSVVRTLVSYALDVWAVASGLTFQ 212
Query: 72 ETSIH---SDIKFISS------NNGYVCTPRYDSRYF--------MEINFDKADVWRYGI 114
E DI S + + + F + +FD + W +G
Sbjct: 213 EVDSQYQEPDIVIHFSRAYHQDSYPFDGPGGTLAHAFFPGEHPISGDTHFDDEETWTFGS 272
Query: 115 --GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G+GT L A+HE GHALGL H + + S+M F
Sbjct: 273 TDGEGTDLFAVAVHEFGHALGLGHSSAPD-------------------SIMRPFYQGPVG 313
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
++ D +Q++YG + +
Sbjct: 314 DPGTYRLSQ----DDRDGLQQLYGRVSQTPND 341
>gi|226941651|ref|YP_002796725.1| outer membrane adhesin like proteiin [Laribacter hongkongensis HLHK9]
gi|226716578|gb|ACO75716.1| putative outer membrane adhesin like proteiin [Laribacter
hongkongensis HLHK9]
Length = 2392
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D L GG N + + + G N + ++++G GNDV++G S
Sbjct: 2203 GDGNDRL----YGGEGNDVLMGMGGDDHLSGGAGNDVLFGGAGNDTLLGGHGNDVLLGGS 2258
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ +GND+ G SG+DTF + + + + + + + L
Sbjct: 2259 GNDTLTGGAGNDILIGGSGVDTFVWNLADAGTGSAPARDVVKDFHLTANGE----QGDIL 2314
Query: 345 RFADQCIDSVNVKQRSILEYTASYED 370
F+D + + ++ +Y +D
Sbjct: 2315 DFSDLLQHAGDKSAATLDQYLDFRDD 2340
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + + G GNDV++G ++ +GNDV G +G DT + + +
Sbjct: 2201 AAGDGNDRLYGGEGNDVLMGMGGDDHLSGGAGNDVLFGGAGNDTLLGGHGNDVL-LGGSG 2259
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA-----------SYEDL 371
N + A S V+ + + + R +++ + DL
Sbjct: 2260 NDTLTGGAGNDILIGGSGVDTFVWNLADAGTGSAPARDVVKDFHLTANGEQGDILDFSDL 2319
Query: 372 IQVIGQDVFESMKHFYEF 389
+Q G ++ + +F
Sbjct: 2320 LQHAGDKSAATLDQYLDF 2337
>gi|149020726|gb|EDL78531.1| rCG31835 [Rattus norvegicus]
Length = 476
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 59/190 (31%), Gaps = 48/190 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI-- 79
W I Y+ T + AL W +V LTF S +DI
Sbjct: 109 WRKNHISYRIVNYTLDLPRESV-------DSAIERALKVWEEVTPLTFSRISEGEADIMI 161
Query: 80 KFISSNNGYVC---------TPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F +G Y ++ + +FD + W G GT L A HE+
Sbjct: 162 SFAVGEHGDFYPFDGVGQSLAHAYPPGPGFYGDAHFDDDEKWSLGP-SGTNLFLVAAHEL 220
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H + YPVY N D
Sbjct: 221 GHSLGLFHSNNKESLMYPVYRFSTSQANIRLS-------------------------QDD 255
Query: 188 IVAVQKIYGA 197
I +Q +YGA
Sbjct: 256 IEGIQSLYGA 265
>gi|114571025|ref|YP_757705.1| glycosyl transferase family protein [Maricaulis maris MCS10]
gi|114341487|gb|ABI66767.1| glycosyl transferase, family 2 [Maricaulis maris MCS10]
Length = 882
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 22/214 (10%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
FD+ Y + + A H+ G ++G +P L+++ + L
Sbjct: 7 SPVFDA----AHYAKVVGIEFDSTINALAHFCAEGCRQGADPHPMVRLDWLLDQQVLDYR 62
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ +V D ++ FD YL D+ + H+ GV
Sbjct: 63 RQSVAQIFKVLVD---RVEKQQSTTPYFDPQYYLKMQPDVAQA----QMNPHWHFWLSGV 115
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
EGR P+ NA V G F S F+ Y+
Sbjct: 116 HEGRFPNPYLDLAHIDRIFGPFGNAQTALSWFVLNGDPSFVPS------SPEFDGVQYML 169
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
++ D+ +++ H+++ G EGR +
Sbjct: 170 NHADVR----AEKVPPLLHFLSSGRYEGREAFVP 199
Score = 44.3 bits (103), Expect = 0.072, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 46/129 (35%), Gaps = 25/129 (19%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
Y D+ Q HF+ G+ EGR YL L D + FG +
Sbjct: 87 FDPQYYLKMQPDVAQA----QMNPHWHFWLSGVHEGRFPN--PYLDLAHIDRIFGPFG-N 139
Query: 419 RGAAARHYITHGVKEGRNPD------AFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
A ++ +G +P F ++Y+ +H D+ A P L HF +
Sbjct: 140 AQTALSWFVLNG-----DPSFVPSSPEFDGVQYMLNHADV-RAEKVPPLL------HFLS 187
Query: 473 FGCEEGRFV 481
G EGR
Sbjct: 188 SGRYEGREA 196
>gi|213514500|ref|NP_001133996.1| Collagenase 3 [Salmo salar]
gi|209156092|gb|ACI34278.1| Collagenase 3 precursor [Salmo salar]
gi|223647246|gb|ACN10381.1| Collagenase 3 precursor [Salmo salar]
gi|223673123|gb|ACN12743.1| Collagenase 3 precursor [Salmo salar]
Length = 473
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 64/203 (31%), Gaps = 47/203 (23%)
Query: 12 RIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+++ D W + Y+ + T + E++ + AL W+KV L F
Sbjct: 96 QVSRFTTFDNRKWQTNRVTYRIENYT---PDMSVAEVDNS----IERALQVWAKVSPLRF 148
Query: 71 EET-SIHSDIKFISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGK 116
S +DI + + +D + +FD + + + +
Sbjct: 149 TRIYSGIADIMISFGTRNHGDSYPFDGPDGTLAHAFSPGADIGGDAHFDDDESFSFSSTR 208
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
G L A HE GH+LGL H + V SY P +
Sbjct: 209 GYNLFLVAAHEFGHSLGLSHSTDPGA---------------LMFPVYSYTNPSTFSLPR- 252
Query: 177 FGYCATPMVSDIVAVQKIYGAPK 199
D+ +Q IYG
Sbjct: 253 ---------DDVNGIQYIYGPNT 266
>gi|325135819|gb|EGC58431.1| iron-regulated protein FrpA [Neisseria meningitidis M0579]
Length = 828
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 552 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 609
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 610 GSTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 647
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 648 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 705
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 706 GEGFGQDTVYN 716
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y +A+ +
Sbjct: 612 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 671
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 672 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 731
Query: 390 GLS 392
+
Sbjct: 732 KAA 734
>gi|109108464|ref|XP_001098302.1| PREDICTED: interstitial collagenase isoform 2 [Macaca mulatta]
Length = 469
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 67/232 (28%), Gaps = 54/232 (23%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T + A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPR-------AAVDQAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE GH+LGL H +M
Sbjct: 207 F-REYNLYRVAAHEFGHSLGLAHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNIYKIEVQQKDSPFIQTI 222
+F DI +Q IYG P G K+ + I TI
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGGSQNPVQPTGPQTPKVCDSKLTFDAITTI 290
>gi|320101679|ref|YP_004177270.1| hypothetical protein Isop_0124 [Isosphaera pallida ATCC 43644]
gi|319748961|gb|ADV60721.1| hypothetical protein Isop_0124 [Isosphaera pallida ATCC 43644]
Length = 2205
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 65/190 (34%), Gaps = 14/190 (7%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
D P + G+D + D TL GG + + G + N T++ +
Sbjct: 1873 DEPGRDLLDGGDGNDTIRGGPGDDTLNGGGGDDFLDGGAGDDLLDGGDGNDTLSGGAGND 1932
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G SGND++ G +++ +G+D+ G +G DT F A + A
Sbjct: 1933 TIRGGSGNDLLFGRDGDDLLDGGTGDDLLFGGNGNDTLFGGAGNDTLS----GGAGNDLL 1988
Query: 330 ANEHKQDFLSDVE--RLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKHF 386
D L E F D++ +L + + +
Sbjct: 1989 RGGAGNDLLFGNEGNDTLFGGAGDDTLQGGAGDDLLVGGEAIRPVGARVAPGQPSDGNDV 2048
Query: 387 YEFGLSEGRD 396
G +GRD
Sbjct: 2049 LAGG--DGRD 2056
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 10/162 (6%)
Query: 222 IYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I+D G G+D L S+ G + N + +S++G GND +
Sbjct: 1648 IFDGGDGNDTLGFADPVPPG------PAGGVSLLGGDGNDLLQGGAGDDSLLGGDGNDTL 1701
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G N++ +G+D G G DT + + N + A +
Sbjct: 1702 LGGDGNDLLQGGAGDDSLLGGDGNDTLWGGLVGETSDLT---NDTLRGGAGNDQLHGTRG 1758
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L V R+ L + L+ +G D E
Sbjct: 1759 DNLLDGGPGDDLIRGVAGRNTLLGGDGNDTLLGGVGSDTIEG 1800
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGV---KNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSS 275
T+ G D L T DL + + G + N T+ + + G
Sbjct: 1384 TLNGGDGSDTLRGTNFADRINGDAGDDLVFGLAGNDTLDGGDGNDTLDGGAGDDLLHGGI 1443
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND ++G+S ++ G+D +G SG + A L ++R +
Sbjct: 1444 GNDSLLGDSGDDTLEGGDGDDTLEGGSGRNLLDGGAGDDLL-VHRLDANGFDLMTGGPGN 1502
Query: 336 DFLS 339
D +S
Sbjct: 1503 DTVS 1506
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 57/162 (35%), Gaps = 26/162 (16%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--------SWSSIGG 255
+ ++ V + T+ G+D L T N +D +++ G
Sbjct: 1726 DTLWGGLVGETSDLTNDTLRGGAGNDQLHGTR---GDNLLDGGPGDDLIRGVAGRNTLLG 1782
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNS---------------ANNVFFESSGNDVFDG 300
+ N T+ +++ G GND+++G++ + GND +G
Sbjct: 1783 GDGNDTLLGGVGSDTIEGGDGNDLILGDADINLATGRLFTLEAGGADFLDGGDGNDTLNG 1842
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
G DT F + L + ++ +E +D L +
Sbjct: 1843 GGGNDTLFGGGGNDLLGVVTLPASLGGAVFDEPGRDLLDGGD 1884
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 23/191 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHT 266
+ ++ G+D LD G L+ + + G N ++ +
Sbjct: 1398 NFADRINGDAGDDLVFGLAGNDTLD-----GGDGNDTLDGGAGDDLLHGGIGNDSLLGDS 1452
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVF------------DGSSGLDT--FFYYAP 312
+++ G G+D + G S N+ +G+D+ G G DT A
Sbjct: 1453 GDDTLEGGDGDDTLEGGSGRNLLDGGAGDDLLVHRLDANGFDLMTGGPGNDTVSVLGTAG 1512
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYED 370
+++ N + + D L VE + D V D
Sbjct: 1513 GDSFQLAPLTNQPGRFSVAANGADRLEGGTVEVVALNGGVGDDRFVVADLAATGLQR-VD 1571
Query: 371 LIQVIGQDVFE 381
L G D F
Sbjct: 1572 LEGGAGNDAFT 1582
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 51/132 (38%), Gaps = 22/132 (16%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVG 273
T++ G+D L GG N + L + + + G E N T+ +++ G
Sbjct: 1963 GGNGNDTLFGGAGNDTLS----GGAGNDL-LRGGAGNDLLFGNEGNDTLFGGAGDDTLQG 2017
Query: 274 SSGNDVVIGN----------------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+G+D+++G N+V G D G +G + S+ +
Sbjct: 2018 GAGDDLLVGGEAIRPVGARVAPGQPSDGNDVLAGGDGRDTLHGGTGDNIMDAGLDSFRER 2077
Query: 318 IYRFENAIIVYD 329
++ + ++++
Sbjct: 2078 MFASQGRHVIFN 2089
>gi|119383312|ref|YP_914368.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119373079|gb|ABL68672.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 1079
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L + + + G N + + ++G +GNDV+ G++ N++ +GND +G +G
Sbjct: 725 LRGGAGNDSLSGLGGNDRLFGGAGADQLLGGAGNDVLNGDAGNDLLNGGAGNDTLNGGAG 784
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+DT Y S + + +D L ++E + + ++L
Sbjct: 785 IDTAAYGGASSGVTV-NLGLTVAQLIGGGQGRDVLRNIENVNGSGFADRLTGNTGNNVLN 843
Query: 364 YTASYEDLIQVIGQDVF 380
A + L G+D
Sbjct: 844 GAAGNDTLSGGAGRDQL 860
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 9/154 (5%)
Query: 240 KNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+N ++N ++ + G N + +++ G +G D ++G + + +GND
Sbjct: 819 RNIENVNGSGFADRLTGNTGNNVLNGAAGNDTLSGGAGRDQLLGGAGADQLLGGAGNDTL 878
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIV--------YDANEHKQDFLSDVERLRFADQC 350
+G +G DT A + + V +D L ++E + +
Sbjct: 879 NGGAGNDTLNGGAGIDTAAYGGASSGVTVNLGLTVAQLIGGGQGRDVLRNIENVNGSGFA 938
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++L A + L G+D
Sbjct: 939 DRLTGNAGNNVLNGAAGNDTLSGGAGRDQLSGGA 972
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG+D+ D++ + V Y S I ++ N T + ++V G +GNDV+ G +
Sbjct: 138 TGGNDVFDISGMTYVSGY--------SRIYMFDGNDTFTGYAGNDNVDGGAGNDVLNGGA 189
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
N+ SGND +G SG D F+ ++ + +Y
Sbjct: 190 GNDTLIGGSGNDTLNGGSGNDYFYIGGTNFGHDVYNGGEG 229
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG+D+ D++ + V Y S I ++ N T + ++V G +GNDV+ G +
Sbjct: 267 TGGNDVFDISGMTYVSGY--------SRIYMFDGNDTFTGYAGNDNVDGGAGNDVLNGGA 318
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
N+ SGND +G SG D F+ + + +Y
Sbjct: 319 GNDTLIGGSGNDTLNGGSGNDYFYIGGTDFGHDVYNGGEG 358
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG+D+ D++ + V Y S I ++ N T + ++V G +GNDV+ G +
Sbjct: 396 TGGNDVFDISGMTYVSGY--------SRIYMFDGNDTFTGYAGNDNVDGGAGNDVLNGGA 447
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
N+ SGND +G SG D F+ + + +Y
Sbjct: 448 GNDTLIGGSGNDTLNGGSGNDYFYIGGTDFGHDVYNGGEG 487
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 240 KNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+N ++N ++ + G N + +++ G +G D + G + + +GND
Sbjct: 927 RNIENVNGSGFADRLTGNAGNNVLNGAAGNDTLSGGAGRDQLSGGAGADRLLGGAGNDTL 986
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+G +G DT + ++ A + D + D +
Sbjct: 987 NGGAGNDTLTGGVGADVFVFAVGNGADRITD-WQDGTDVIR 1026
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ + G I+L + + N E+++G++ D++ G N+ S
Sbjct: 18 SALFGAHISINLRERRFMATITGTDNS--------ETLLGTANADLINGLGGNDTITGGS 69
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
GND G SG DTF + IY +
Sbjct: 70 GNDTMHGGSGDDTFLIGGTDIGHDIYDGGDGA 101
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 41/99 (41%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G L + + S++ G ++ + + + ++ G+ ++ ++G + ++ GND
Sbjct: 4 TGRARQFLLTSAAGSALFGAHISINLRERRFMATITGTDNSETLLGTANADLINGLGGND 63
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G SG DT + + I + +YD +
Sbjct: 64 TITGGSGNDTMHGGSGDDTFLIGGTDIGHDIYDGGDGAD 102
>gi|85703682|ref|ZP_01034786.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. 217]
gi|85672610|gb|EAQ27467.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. 217]
Length = 576
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 10/153 (6%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSG-GDDLL------DLTLIGGVKNYIDLNTESW 250
G+ G++ + G GDD L D + ID +
Sbjct: 356 GNEGDDTIGGGFGADSVSGGAGNDVVAGGAGDDTLEGGEGNDNMSGSFGNDSIDAGDGA- 414
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
IGG TI + V G GND ++G N+ +D +G +G DT
Sbjct: 415 EDIGGGTGRDTIDAGAGDDRVGGGEGNDSILGGDGNDFLAGGGRDDTLNGGAGNDTINAG 474
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
A + + + + + + D ++D E
Sbjct: 475 AGNDVITGGADADQFVFSSFFDGEADVITDFED 507
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I LN + +S+ + I + + G G D + G N+V G+D+ D
Sbjct: 154 NQPISLNDFANASVSELSADELIIGTNGPDFLTGDDGQDTIEGRGGNDVLNGGEGDDLLD 213
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G G DT Y S + + + D L ++E++ F DQ + +
Sbjct: 214 GGEGFDTATYNVGSRNEFQFTLTETGLRIASPNDGVDDLVNIEQVEFLDQTVLVSD 269
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 54/173 (31%), Gaps = 12/173 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG+D + + N + +IGG N T+ + +++ G G D V G +
Sbjct: 321 GGGNDSIAAS----DGNDLAFGGTGNDNIGGGVGNDTLDGNEGDDTIGGGFGADSVSGGA 376
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--------ENAIIVYDANEHKQD 336
N+V +G+D +G G D + I A + +
Sbjct: 377 GNDVVAGGAGDDTLEGGEGNDNMSGSFGNDSIDAGDGAEDIGGGTGRDTIDAGAGDDRVG 436
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + D + L A + + G DV +F
Sbjct: 437 GGEGNDSILGGDGNDFLAGGGRDDTLNGGAGNDTINAGAGNDVITGGADADQF 489
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/247 (20%), Positives = 75/247 (30%), Gaps = 35/247 (14%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D G N + +E +GG N + +S+ S GND+ G + N+
Sbjct: 287 VDAVFTGTADNDTLIGSEGNDFLGGGLGNDSFEGGGGNDSIAASDGNDLAFGGTGNDNIG 346
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE-------- 342
GND DG+ G DT + A A D L E
Sbjct: 347 GGVGNDTLDGNEGDDTIGGGFGADSVS----GGAGNDVVAGGAGDDTLEGGEGNDNMSGS 402
Query: 343 ----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGRD 396
+ D D R ++ A + + G D F G GRD
Sbjct: 403 FGNDSIDAGDGAEDIGGGTGRDTIDAGAGDDRVGGGEGNDSILGGDGNDFLAGG---GRD 459
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
T + D + G+D G + D F + D+I F
Sbjct: 460 DTLNGG---AGNDTINAGAGNDVITG-----------GADADQFVFSSFFDGEADVITDF 505
Query: 457 ADAPDLV 463
D+ D V
Sbjct: 506 EDSIDRV 512
>gi|260799306|ref|XP_002594638.1| hypothetical protein BRAFLDRAFT_264495 [Branchiostoma floridae]
gi|229279873|gb|EEN50649.1| hypothetical protein BRAFLDRAFT_264495 [Branchiostoma floridae]
Length = 498
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 42/194 (21%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ W + + D+ + + + + R A W + LTF +
Sbjct: 74 YALQGSTWPKRDLTWSLADADYTP---DLGK-DDVDEAITR-AFQLWQEQTPLTFTRVTN 128
Query: 76 HSDIKFIS-----------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+DI G + ++ + +FD+++ W GT L A
Sbjct: 129 RADIVIKFAPIEHGDGAPFDGPGGTLAHAFFPQFGGDAHFDESEQWTVRTSSGTNLLQVA 188
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GH+LGL H + + YE + L S
Sbjct: 189 AHEFGHSLGLSHSEISDALMAPFYRG--YEPNLVLHS----------------------- 223
Query: 185 VSDIVAVQKIYGAP 198
DI +Q +YG P
Sbjct: 224 -DDIAGIQMLYGMP 236
>gi|23009067|ref|ZP_00050256.1| COG3754: Lipopolysaccharide biosynthesis protein [Magnetospirillum
magnetotacticum MS-1]
Length = 486
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 72/233 (30%), Gaps = 44/233 (18%)
Query: 377 QDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKE 433
+ H+ G + FD Y R +G +A ++YI +G E
Sbjct: 32 NAGMDPFYHYLVEGERNNLNPNPLFDVEWY-------RQAYGLSAHESALKNYI-YGGHE 83
Query: 434 GRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
GR+P F + Y + + + G D F Y Y
Sbjct: 84 GRDPHPVFDSAYYRSIVPCDGTSPLEDYLTKNTGIDPCIVF-----------DASYF--Y 130
Query: 493 DDLRNVFGSDRG---AAARHYITHGVKEGRNPDAFKAL-EYIASHEDLINAFADAPDLVQ 548
+ L+ G A HY+ K NP F + Y ++D+ + D
Sbjct: 131 EQLQRQNGDAVRSDLPALVHYLELDNKTAINPHPFFSKAHYYRKYKDISPSKVD------ 184
Query: 549 AGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
H+ ++EGR F P Y+ + HY+ G+
Sbjct: 185 -AFVHYMRSSHKEGRQPHPLFEPGHYVEQCPEAKQA------NPLVHYLRKGV 230
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 69/230 (30%), Gaps = 37/230 (16%)
Query: 385 HFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 441
H+ G G F Y Y + G D HY+ G + NP+ F
Sbjct: 3 HYITQGWKNGTKPHPLFWGDWYREKY--MAQNAGMD---PFYHYLVEGERNNLNPNPLFD 57
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVF 499
Y ++ + ++ +G EGR FDS Y R++
Sbjct: 58 VEWYRQAY---------GLSAHESALKNYI-YGGHEGRDPHPVFDSAYY-------RSIV 100
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
D + Y+T G +P Y +E L DA H+
Sbjct: 101 PCDGTSPLEDYLT--KNTGIDPCIVFDASYF--YEQLQRQNGDAVRSDLPALVHYLELDN 156
Query: 560 EE--GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
+ F+ Y Y D+ + A HY+ KEGR
Sbjct: 157 KTAINPHPFFSKAHYYRKYKDISP----SKVDAFVHYMRSSHKEGRQPHP 202
Score = 40.9 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 19/144 (13%)
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D ++G+D + SY Y+ + +N V D + V L D
Sbjct: 110 DYLTKNTGIDPCIVFDASYFYEQLQRQNGDAVRS------DLPALVHYLEL-DNKTAINP 162
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRN 413
S Y Y+D+ ++ H+ EGR F+ Y+ + +
Sbjct: 163 HPFFSKAHYYRKYKDISP----SKVDAFVHYMRSSHKEGRQPHPLFEPGHYVEQCPEAKQ 218
Query: 414 VFGSDRGAAARHYITHGVKEGRNP 437
HY+ GV +P
Sbjct: 219 A------NPLVHYLRKGVDLNLSP 236
>gi|301773300|ref|XP_002922062.1| PREDICTED: collagenase 3-like [Ailuropoda melanoleuca]
Length = 470
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 60/193 (31%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---ETSI 75
R WS + Y+ T ++ ++ R A WS V L F E +
Sbjct: 108 RTLKWSKTNLTYRIVNYTPDLTHSEV-------EKAFRKAFKVWSDVTPLNFTRLHEGTA 160
Query: 76 HSDIKFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
I F + ++G P Y + +FD + W KG L A
Sbjct: 161 DIMISFGTKDHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 219
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GH+LGL H + + +Y M+
Sbjct: 220 AHEFGHSLGLDHSKDPGA---------------LMFPIYTYTGKSHFMLPE--------- 255
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 256 -DDVQGIQFLYGP 267
>gi|50731119|ref|XP_417175.1| PREDICTED: similar to preprostromelysin [Gallus gallus]
Length = 496
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 65/197 (32%), Gaps = 42/197 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
+R ++K + +T L++ L + E A WS V L F S
Sbjct: 97 VRSYSTFPRNPKWKKEDVTYRILNYTPDMLQADVDEAIAKAFQLWSSVTPLRFIRLYSGD 156
Query: 77 SDI--KFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWR-YGIGKGTILSH 122
+DI F S +G + + +FD+ + W + G L
Sbjct: 157 ADIMISFASGFHGDFYSFDGPGGTLAHAYPPNTGIGGDAHFDEDENWTKFTTYSGYNLFL 216
Query: 123 NALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE+GH+LGL H + YP+Y D+
Sbjct: 217 VAAHELGHSLGLGHSNVFGALMYPIYMAK-----DTRNY--------------------- 250
Query: 182 TPMVSDIVAVQKIYGAP 198
DI +Q +YG P
Sbjct: 251 RLHQDDISGIQALYGPP 267
>gi|221115658|ref|XP_002168462.1| PREDICTED: similar to Matrix metalloproteinase 1 CG4859-PA [Hydra
magnipapillata]
Length = 579
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 77/215 (35%), Gaps = 48/215 (22%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLT 69
+ R + ++ ++K LT L+ + L+ + ++ + A W V +L
Sbjct: 180 DSSRLQDTRIRRYTPQGSKWKKSDLTWKLLNDNNDNLSRSQVEDTLQQAFARWEAVTNLR 239
Query: 70 FE--ETSIH--SDI------KF--------ISSNNGYV----CTPRYDSRYFMEINFDKA 107
F E + + +DI +F + G V P + +++F
Sbjct: 240 FHKLEKNSNEYADIDVSFLYRFQQQQRDPSLFYGAGIVLAHGYYPNTNKGISGDLHFYDE 299
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ G KG L A+HEIGH +GL H N S+M +
Sbjct: 300 TEFTLGTTKGINLLWVAVHEIGHCIGLEHSSVEN-------------------SIM--YP 338
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
M SF T DI+ +Q IYG K +
Sbjct: 339 RYKGYMGESF----TLSKDDILGIQSIYGFKKQTT 369
>gi|121592988|ref|YP_984884.1| hypothetical protein Ajs_0558 [Acidovorax sp. JS42]
gi|120605068|gb|ABM40808.1| hypothetical protein Ajs_0558 [Acidovorax sp. JS42]
Length = 1880
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 12/126 (9%)
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
Y Q ++HF + G + G FD Y ++ DL+N + H
Sbjct: 33 YGQQYMADYQGTLSPIEHFVQIGAARGYKPNATFDPTYYKNAFADLKNT-DFNAADLLYH 91
Query: 426 YITHGVKEGRNPDA----FKALEYIASHEDLINAF-----ADAPDLVQVGKDHFSNFGCE 476
++ +G+ EGR P+A F Y+A++ D+ H+ FG
Sbjct: 92 FMQYGLDEGRTPNAALATFDGTAYLAANPDVAAYVNANLAQFGGSATNGALAHYVKFGAA 151
Query: 477 EGRFVT 482
EGR
Sbjct: 152 EGRTAP 157
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 58/173 (33%), Gaps = 32/173 (18%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ Y + L + +F FDS+ Y Y +
Sbjct: 1 MTYFTTGAQLQAALNALPNTKTGNFVA----------FDSFFYGQQYMADYQ----GTLS 46
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
H++ G G P+A F Y + DL N +A DL+ HF +G +EGR
Sbjct: 47 PIEHFVQIGAARGYKPNATFDPTYYKNAFADLKNTDFNAADLLY----HFMQYGLDEGRT 102
Query: 481 VT-----FDSYLYLGSYDD--------LRNVFGSDRGAAARHYITHGVKEGRN 520
FD YL + D L GS A HY+ G EGR
Sbjct: 103 PNAALATFDGTAYLAANPDVAAYVNANLAQFGGSATNGALAHYVKFGAAEGRT 155
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 62/161 (38%), Gaps = 22/161 (13%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 536
G FV FDS+ Y Y + H++ G G P+A F Y + DL
Sbjct: 23 GNFVAFDSFFYGQQY----MADYQGTLSPIEHFVQIGAARGYKPNATFDPTYYKNAFADL 78
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSI-----TFNPDLYLTSYDDLWNVF-------- 583
N +A DL HF +G +EGR+ TF+ YL + D+
Sbjct: 79 KNTDFNAADL----LYHFMQYGLDEGRTPNAALATFDGTAYLAANPDVAAYVNANLAQFG 134
Query: 584 GSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
GS + A HY+ G EGR + + L+ + D
Sbjct: 135 GSATNGALAHYVKFGAAEGRTAPGTSVSNGQTFTLTASAPD 175
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 14/115 (12%)
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
Q LS +E Y ++ DL + + + + HF ++GL EG
Sbjct: 42 QGTLSPIEHFVQIGAARGYKPNATFDPTYYKNAFADL-KNTDFNAADLLYHFMQYGLDEG 100
Query: 395 RDIT-----FDSYLYLGSYDDLRNVFGSDRG--------AAARHYITHGVKEGRN 436
R FD YL + D+ ++ A HY+ G EGR
Sbjct: 101 RTPNAALATFDGTAYLAANPDVAAYVNANLAQFGGSATNGALAHYVKFGAAEGRT 155
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 10/147 (6%)
Query: 203 GNNIYKIEVQQKDSP------FIQTIYDSGGDDLLDLTLIGGV-KNYIDLNTESWSSIGG 255
G+ Y I + D TI G+D + + G N + L+ + S
Sbjct: 635 GDGAYDINLGAGDDNLTKHGNGNNTIVAGAGNDTVTIVGTGNTSNNNVKLDAGNDSLTIV 694
Query: 256 YEKNMTIAQHTVIESV-VGSSGNDVVIGNS-ANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N ++ T +SV + +GN V G ++++ GND +G D
Sbjct: 695 DNGNNSVEGGTGDDSVTIVGNGNQTVNGGDDSDSIVIVGDGNDSIIAGTGNDDVTIAGTG 754
Query: 314 YLY-KIYRFENAIIVYDANEHKQDFLS 339
Y + +++++ + D+ S
Sbjct: 755 KQYVDLGEGNDSLLINGSASGNLDYAS 781
Score = 40.5 bits (93), Expect = 0.90, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 10/109 (9%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLW 580
AF + Y + + +HF G G + TF+P Y ++ DL
Sbjct: 27 AFDSFFYGQQYMADYQG-------TLSPIEHFVQIGAARGYKPNATFDPTYYKNAFADLK 79
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLS 629
N + H++ +G+ EGR + F L+ A ++
Sbjct: 80 NTDFNAADLLY-HFMQYGLDEGRTPNAALATFDGTAYLAANPDVAAYVN 127
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 1/127 (0%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI G+D + + G + + L+ +S G E T A+ V V G +
Sbjct: 570 GHATIVAGEGEDTIVVNQTGLLNVDLGLDDDSLVINGDVEDLTTTARDGVSVVVAGVGDD 629
Query: 278 DVVIGNSANNVFFESSGNDVFDG-SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
V+I +G+D +G +T A + I N + D
Sbjct: 630 TVLIEGDGAYDINLGAGDDNLTKHGNGNNTIVAGAGNDTVTIVGTGNTSNNNVKLDAGND 689
Query: 337 FLSDVER 343
L+ V+
Sbjct: 690 SLTIVDN 696
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 80/279 (28%), Gaps = 39/279 (13%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
GG V Y NDS +V +Y FG D++
Sbjct: 1431 GGGTANATVYGGYGNDSIRVTVSNY-AAVYGYDGLDFGEADDQDTIDVIVT----AGSAY 1485
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------------DLTLIGGVKNYIDL 245
GN++ + TIY GDD + D+T+ GG + +
Sbjct: 1486 VAGNDVSDRITVSVQND--ATIYGESGDDFIQVSTRVVGATTVAADDVTVDGGSGDDTIV 1543
Query: 246 NTESWSSIGGYEKNMTIAQHTVI-ESVVGSSGNDVVIGNSANNVFFESSGND-------- 296
+ + G +I V +V G + +DV+ ++ +NV G+D
Sbjct: 1544 VAALTADVVGGTGLDSITVTVVNGATVAGGADDDVITVSAGDNVSVNGDGDDDSITVTTL 1603
Query: 297 ---VFDGSSGLDTFFY-----YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+G +G D A + + + + D + L
Sbjct: 1604 DSATVNGGTGDDAIVVTYGNDTAGTDNASVSGGDGDDSITIHEGSGADGATVDSGLGQDV 1663
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++ + + ++Q + F
Sbjct: 1664 IGLNVSATGAADTIMFGTVAYTVLQDVDTVSTTQNYDFN 1702
>gi|99081675|ref|YP_613829.1| RTX toxins and related Ca2+-binding proteins-like [Ruegeria sp.
TM1040]
gi|99037955|gb|ABF64567.1| RTX toxins and related Ca2+-binding proteins-like protein [Ruegeria
sp. TM1040]
Length = 867
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 63/189 (33%), Gaps = 13/189 (6%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSS 275
+ +GG+D + GG + I L+ + + G N + + ++G
Sbjct: 474 GGADQLIGNGGNDTIK----GGGGHDI-LSGGAGKDVLKGNGGNDALNGGGGRDKLIGGR 528
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G +V GNDV DG G D + + I + +V +
Sbjct: 529 GNDTMSGGDVRDVLKGGGGNDVLDGGEGRDKLIGGSGND--TITTGFDGDVVRAGSGIDT 586
Query: 336 DFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
++ E D+ + IL+ +A D V G G
Sbjct: 587 IIIAGPE----GDRDLRIRGTMDDGDILDLSALNIDSYFVEDSFAGGGASSVRTRGDGLG 642
Query: 395 RDITFDSYL 403
DI FD
Sbjct: 643 YDIDFDGDG 651
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G I + ++G+ GND + G +++ +G DV G+ G D
Sbjct: 461 LDGRGGADLIVGRGGADQLIGNGGNDTIKGGGGHDILSGGAGKDVLKGNGGNDALNGGGG 520
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFLSDVE 342
R + + D + D L E
Sbjct: 521 RDKLIGGRGNDTMSGGDVRDVLKGGGGNDVLDGGE 555
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 43/150 (28%), Gaps = 10/150 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G ++L S + G + + +VG G D +IGN N+
Sbjct: 431 DWRVSLGSYETLELGNRSDERLTGTAGENFLDGRGGADLIVGRGGADQLIGNGGNDTIKG 490
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+D+ G +G D + D +S D
Sbjct: 491 GGGHDILSGGAGKDVLKGNGGNDAL----NGGGGRDKLIGGRGNDTMSG------GDVRD 540
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+L+ + LI G D
Sbjct: 541 VLKGGGGNDVLDGGEGRDKLIGGSGNDTIT 570
>gi|302382650|ref|YP_003818473.1| Hemolysin-type calcium-binding region [Brevundimonas subvibrioides
ATCC 15264]
gi|302193278|gb|ADL00850.1| Hemolysin-type calcium-binding region [Brevundimonas subvibrioides
ATCC 15264]
Length = 1009
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 28/235 (11%)
Query: 195 YGAPKGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Y + G+ GN++ Y + GDD +++ + N + E +
Sbjct: 598 YDSLYGNGGNDVLFGYGGIDVLVGGDGADIMVGGDGDDTYEVSEV--ADNIQEGAGEGFD 655
Query: 252 SIGGYEKNMTIAQHTV-------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
++ Y T+A +T + G++G++ ++GN +N+ +GND F G +G
Sbjct: 656 TVFAYASGYTLAANTESLRLVGSATTGYGNAGDNTLVGNGLDNLLVGGAGNDTFYGGTGD 715
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT Y + I + ++VE LR +++ +++
Sbjct: 716 DT--YEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVENLRLVGTAVNATGNALNNMIVG 773
Query: 365 TASYEDLIQVIGQDVF-----------ESMKHFYEFGLSEGRDITFDSYLYLGSY 408
LI G D+ EG D + Y+ +Y
Sbjct: 774 NDGNNVLIGGAGNDIMVGSLGNDAYEVTEAGDVVYEAAGEGTDTVYS---YIDTY 825
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 63/218 (28%), Gaps = 22/218 (10%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
P T+ G L+ GG L T + + +T+ + + G+
Sbjct: 270 QPTSVTLSQDGAYTLVSAQTPGGAFAVRVLGTITLGDVIPTFAGLTVQGTAEGDVLSGTD 329
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+D G ++V GNDVF G SG DT Y++ + +
Sbjct: 330 RSDTFYGYGGDDVLSGGGGNDVFIGGSGNDTMIGGQGDDAYEVTEAGDVVTEQAGEGSDT 389
Query: 336 --------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF------- 380
++VE L + + L A L+ G D
Sbjct: 390 VYSYLDSYTLAANVETLALVGSARAGIGNAGNNTLIGNAGANLLVGGAGVDRMVGGQGDD 449
Query: 381 ----ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
EG D + YL +Y NV
Sbjct: 450 FYEVTEAGDVVVEAAGEGTDTVYS---YLETYTASANV 484
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 49/173 (28%), Gaps = 20/173 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-------- 320
E + G+ G D + GN N+V F G DV G G D Y++
Sbjct: 590 EVLNGADGYDSLYGNGGNDVLFGYGGIDVLVGGDGADIMVGGDGDDTYEVSEVADNIQEG 649
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCI---------DSVNVKQRSILEYTASYEDL 371
A ++ E LR V ++L A +
Sbjct: 650 AGEGFDTVFAYASGYTLAANTESLRLVGSATTGYGNAGDNTLVGNGLDNLLVGGAGNDTF 709
Query: 372 IQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGA 421
G D EG D F Y LG+ + + G+ A
Sbjct: 710 YGGTGDDTYEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVENLRLVGTAVNA 762
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N T + + G GND++ G N+ G+DV G +G D F A
Sbjct: 3 TYNGTPGNDTTRGSAGDDDISGLGGNDILEGMGGNDFITGGDGDDVLLGGTGTDVLFGGA 62
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
L + N I + +D L E
Sbjct: 63 GDDLLWGGGYGNTGIAT--PDQVRDDLDGGE 91
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 45/187 (24%), Gaps = 40/187 (21%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G VIGN+ +N G+ V G G DT + I V
Sbjct: 499 NADGG----TVIGNALDNTLTVGGGSAVLIGGGGSDTAVIGGARAGFTIATNSGITTVTG 554
Query: 330 ANEHKQDFLSDV-----------------------ERLRFADQCIDSVNVKQRSILEYTA 366
E L AD +L
Sbjct: 555 GGPDDHTGRGGADPVLGPGRGPDDRPDPGRNPGGGEVLNGADGYDSLYGNGGNDVLFGYG 614
Query: 367 SYEDLIQVIGQDVF-----------ESMKHFYEFGLSEGRDITF--DSYLYLGSYDDLRN 413
+ L+ G D+ + + G EG D F S L + +
Sbjct: 615 GIDVLVGGDGADIMVGGDGDDTYEVSEVADNIQEGAGEGFDTVFAYASGYTLAANTESLR 674
Query: 414 VFGSDRG 420
+ GS
Sbjct: 675 LVGSATT 681
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 29/82 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G N + + + G G+DV++G + +V F +G+D+ G +T
Sbjct: 21 DISGLGGNDILEGMGGNDFITGGDGDDVLLGGTGTDVLFGGAGDDLLWGGGYGNTGIATP 80
Query: 312 PSYLYKIYRFENAIIVYDANEH 333
+ E +
Sbjct: 81 DQVRDDLDGGEGNDSLLIGRND 102
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 11/169 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + E++ + + D G G D++DLT + + + L+ +
Sbjct: 107 GNGDDEFEMEGEGAESWTATMDGGAGQDIVDLTFV-RYRTIVYLDPTGGTEGLVLRNMEL 165
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNV---------FFESSGNDVFDGSSGLDTFFYYAP 312
+A V G + DVV G + + GND+ G G D +
Sbjct: 166 VALGGYGSKVFGGARVDVVFGGAGIDDIDGAGGDDFLTGGGGNDILAGGDGADVLVGGSG 225
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
S L + A + + L ++ + ID +++ S+
Sbjct: 226 SDLLTGGAGADIFGYLSAQDSRAGSLDIIQDFQTGLDVIDLTDLQPTSV 274
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GS+GND ++GN NN+ ++GND+ G +G+D F++ A +I F
Sbjct: 845 GSTGNDTIVGNGLNNILNGNAGNDILTGGAGVDQFWHLAGGGHDRITDFSTG 896
Score = 37.0 bits (84), Expect = 9.2, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 11/183 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLN-TESWSSIGGYE 257
G G++ Y EV + ++ G D + N +L + + G
Sbjct: 711 GGTGDDTY--EVTEAGDVVVEA--AGEGIDTIFSYVTYTLGANVENLRLVGTAVNATGNA 766
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--GSSGLDTFFYYAPSYL 315
N I + ++G +GND+++G+ N+ + + DV G DT + Y +Y
Sbjct: 767 LNNMIVGNDGNNVLIGGAGNDIMVGSLGNDAYEVTEAGDVVYEAAGEGTDTVYSYIDTYQ 826
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ ++ + + + IL A + +
Sbjct: 827 MSLNVEALYLVGSGRVGLGS---TGNDTIVGNGLNNILNGNAGNDILTGGAGVDQFWHLA 883
Query: 376 GQD 378
G
Sbjct: 884 GGG 886
>gi|254805196|ref|YP_003083417.1| FrpA/C-related protein [Neisseria meningitidis alpha14]
gi|254668738|emb|CBA06575.1| FrpA/C-related protein [Neisseria meningitidis alpha14]
Length = 1422
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 746 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 803
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 804 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 841
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 842 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 899
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 900 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 947
Score = 71.3 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 946 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1003
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1004 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1041
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1042 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1099
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1100 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1147
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 1146 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 1203
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1204 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1241
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1242 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1299
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1300 GEGFGQDTVYN 1310
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 653 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 712
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 713 YATGRKDIIRFTDGITAD 730
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1206 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 1265
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1266 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 1325
Query: 390 GLS 392
+
Sbjct: 1326 KAA 1328
>gi|325129718|gb|EGC52529.1| Iron-regulated protein frpA [Neisseria meningitidis OX99.30304]
Length = 601
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 325 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 382
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + G+DLL+ G N +I +
Sbjct: 383 GSTLNGGLGDDYLYGADGNDLLN----------------------GDAGNDSIYSGNGND 420
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 421 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 478
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 479 GEGFGQDTVYN 489
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G N++ +GND +G DT + Y +A+ +
Sbjct: 385 TLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGE 444
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 445 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 504
Query: 390 GLS 392
+
Sbjct: 505 KAA 507
>gi|119357547|ref|YP_912191.1| 5'-nucleotidase domain-containing protein [Chlorobium
phaeobacteroides DSM 266]
gi|119354896|gb|ABL65767.1| 5'-Nucleotidase domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 3977
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 4/93 (4%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----IIVYDA 330
G+D + G+ N+ GND DG G DT + Y I E + I+ A
Sbjct: 3750 GGDDTLFGDDDNDTLKGGQGNDSLDGGEGDDTVEFAGNFDDYTISYDEASDRYTIVDKTA 3809
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ D + E RFAD + +
Sbjct: 3810 DRDGTDHVIGFEHFRFADGTKEDIIDPTVKAFN 3842
>gi|149201404|ref|ZP_01878379.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149145737|gb|EDM33763.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 688
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++I + SGGD ++ G + ID + IGG TI
Sbjct: 482 DSIMGGAGNDVVAGGADNDTLSGGDGNDSMSGSFGNDS-IDGGEGAD-DIGGGTGRDTID 539
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ V G G+D ++G ++ ND+ DG +G DT A + +
Sbjct: 540 AGAGDDRVGGGEGDDSILGGDGDDFLAGGGRNDLIDGGAGSDTINAGAGNDTITGGADAD 599
Query: 324 AIIVYDANEHKQDFLSDVER 343
+ + + D ++D E
Sbjct: 600 LFVFSSFFDGEADIITDFED 619
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 1/136 (0%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +++ G+ G D + + N+ +GND S G D A + +
Sbjct: 402 VITGTDGDDTLAGTDGGDQIAAGAGNDSIDGGAGNDSISSSDGNDQAIGGAGNDNIGGGQ 461
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ I A + + + L + + G D
Sbjct: 462 -GDDTIDGGAGDDIIGGGFGADSIMGGAGNDVVAGGADNDTLSGGDGNDSMSGSFGNDSI 520
Query: 381 ESMKHFYEFGLSEGRD 396
+ + + G GRD
Sbjct: 521 DGGEGADDIGGGTGRD 536
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 55/205 (26%), Gaps = 39/205 (19%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I + GDD L T G + I + S I G N +I+ + +G +GND
Sbjct: 401 DVITGTDGDDTLAGTDGG---DQIAAGAGNDS-IDGGAGNDSISSSDGNDQAIGGAGNDN 456
Query: 280 VIGNSANNVFFE---------------------------SSGNDVFDGSSGLDTFFYYAP 312
+ G ++ + ND G G D+
Sbjct: 457 IGGGQGDDTIDGGAGDDIIGGGFGADSIMGGAGNDVVAGGADNDTLSGGDGNDSMSGSFG 516
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFLSDVE---RLRFADQCIDSVNVKQRSILEY 364
+ + I + D + E + D + +++
Sbjct: 517 NDSIDGGEGADDIGGGTGRDTIDAGAGDDRVGGGEGDDSILGGDGDDFLAGGGRNDLIDG 576
Query: 365 TASYEDLIQVIGQDVFESMKHFYEF 389
A + + G D F
Sbjct: 577 GAGSDTINAGAGNDTITGGADADLF 601
>gi|126729508|ref|ZP_01745321.1| type I secretion target repeat protein [Sagittula stellata E-37]
gi|126709627|gb|EBA08680.1| type I secretion target repeat protein [Sagittula stellata E-37]
Length = 1094
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 3/124 (2%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNY--IDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSG 276
TI G+D +D + I ++ ID+NTE+ + G+ N TI +++ G SG
Sbjct: 703 DTIDGGQGNDYIDGSNIASLELTDDIDVNTENDRDLLQGFLGNDTIYGGDDDDTLQGGSG 762
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + G ++ ND G G DT A + + I V A D
Sbjct: 763 DDYLDGGIDDDEISGGRDNDTLIGGQGNDTLNGGAGMDDIQGGSDRDVIFVDSAAHGIGD 822
Query: 337 FLSD 340
+
Sbjct: 823 TVDG 826
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 57/219 (26%), Gaps = 24/219 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G ++ I + D P + G L D+ N D S+ G
Sbjct: 603 GQGNDTIIAGIDTFSDYENDDPAF-----APGSPLRDVFGFTSDPNQEDGRD----SVDG 653
Query: 256 YEKNMTIAQHTVIESVVGSSGND---------VVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ I +++ G GND ++ GN ++ G+D DG G D
Sbjct: 654 EGGDDYIETGDDRDTITGGGGNDTIDGGIDDDLIRGNQGDDSLIGGHGSDTIDGGQGNDY 713
Query: 307 FFYYAPSY---LYKIYRFENAIIVYDANEHKQDFLSDVER---LRFADQCIDSVNVKQRS 360
+ I D + + L+
Sbjct: 714 IDGSNIASLELTDDIDVNTENDRDLLQGFLGNDTIYGGDDDDTLQGGSGDDYLDGGIDDD 773
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + LI G D + RD+ F
Sbjct: 774 EISGGRDNDTLIGGQGNDTLNGGAGMDDIQGGSDRDVIF 812
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 59/212 (27%), Gaps = 30/212 (14%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+++ ++ GGDD + T+ GG N I G + +
Sbjct: 634 DVFGFTSDPNQEDGRDSVDGEGGDDYIETGDDRDTITGGGGNDTIDGGIDDDLIRGNQGD 693
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNS-------------------------ANNVFFESSG 294
++ +++ G GND + G++ N+ +
Sbjct: 694 DSLIGGHGSDTIDGGQGNDYIDGSNIASLELTDDIDVNTENDRDLLQGFLGNDTIYGGDD 753
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D G SG D R + +I N+ + +D+ + V
Sbjct: 754 DDTLQGGSGDDYLDGGIDDDEISGGRDNDTLIGGQGNDTLNGGAGMDDIQGGSDRDVIFV 813
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ I + + + +
Sbjct: 814 DSAAHGIGDTVDGGSGGFVDVADPEDAPNQDY 845
>gi|238785711|ref|ZP_04629686.1| serine protease [Yersinia bercovieri ATCC 43970]
gi|238713396|gb|EEQ05433.1| serine protease [Yersinia bercovieri ATCC 43970]
Length = 1815
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
V + T+ GG+D+L + G I + ++ I + TI
Sbjct: 665 SVFIQGGNGNSTLVGGGGNDVL--SGGRGKNKIIGGSGKAV--IYAGPQGDTIYASEQGS 720
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G D + GN +N+V G+ + DG G++ + Y I R E+ + D
Sbjct: 721 IIHAGGGADRIYGNKSNDVIVAGQGDALIDGGEGINVLALHGSYADYTITRTESGYQLKD 780
Query: 330 --ANEHKQDFLSDVERLRFADQCIDSVNV 356
A L +++L FAD ++
Sbjct: 781 KVAGRDGTLTLKRIQKLNFADIAAVELDA 809
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 29/227 (12%)
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYK--IEVQQKDSPFIQTIYDS---- 225
+A G I +++G S + +Y P ++DS
Sbjct: 1388 KNAKNGQPVELKNWSI----RLFG-NSISRDDTYVYTDEFAALVAQEPTRAFLHDSDDGV 1442
Query: 226 -GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG + L+++ + ++L T + +T+ I +++ GND++I
Sbjct: 1443 VGGRNTLNMSAVA-ADVKVNLLTGE---ATLGDAQLTLRSPARIHNLISGDGNDILIAGR 1498
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++V G +V G +G + F + + I+ +DA+ + + +
Sbjct: 1499 QHSVLDGGRGLNVLTGGAGKEIFVVRKRAS------GGDWIVNFDADRGEV-----IHLI 1547
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFESMKHFYEFG 390
FAD+ ++ +KQ ++ I V ++V H + F
Sbjct: 1548 GFADKRFRALRLKQDGQDVRVQLNDNQHIIVKDREVATLKAHHFHFA 1594
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 4/118 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V G+ G+D +I + + G + + G+SG D F A I V
Sbjct: 571 KNVYGARGDDDLIASPEGSWLVGRGGRNTYTGNSGNDVFVISASDDTRYIQGKGGTDTVL 630
Query: 329 DANEHKQDF---LSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ S + + D I ++ L+ G DV
Sbjct: 631 ITGDQGVGLNMARSGITIAQGGDGDDIIISGGNNSVFIQGGNGNSTLVGGGGNDVLSG 688
>gi|126327134|ref|XP_001366622.1| PREDICTED: similar to matrix metalloproteinase [Monodelphis
domestica]
Length = 518
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 70/205 (34%), Gaps = 43/205 (20%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-ETSIHSDI--KFISSN 85
++K + LT + + + + AL WS V L F + + +DI F +
Sbjct: 151 KWKKNTLTYRVSKYTSSMTHAEVDKAVDMALQAWSNAVPLNFVRQNTGEADIMISFEIGD 210
Query: 86 NGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+G + +FD A+ W G G L A HE GHALGL
Sbjct: 211 HGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN-GFNLFTVAAHEFGHALGL 269
Query: 135 MHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H + YP Y + Y + +P+D D+ +Q
Sbjct: 270 AHSTDPSALMYPTYKYQHPYG----------FRLPKD----------------DVKGIQA 303
Query: 194 IYGAPKGSLGN-NIYKIEVQQKDSP 217
+YG K + N+ + P
Sbjct: 304 LYGPRKTATERPNVPNVPPHNPSDP 328
>gi|170585183|ref|XP_001897365.1| Matrixin family protein [Brugia malayi]
gi|158595191|gb|EDP33761.1| Matrixin family protein [Brugia malayi]
Length = 153
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 56/170 (32%), Gaps = 43/170 (25%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIK--FISSNNGYVCTPRYDSRY--------------- 98
+ A EWS V L F E + +IK F+S +G +
Sbjct: 2 KTAFEEWSTVTQLNFIEVKRNGNIKIAFVSGEHGDGYSFDGPGLSLFFVISKILAHTLLP 61
Query: 99 -FMEINFDKADVWRYGIGKGTILSHNA------LHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ I+FD + W I +HEIGH LGL H +
Sbjct: 62 PYGLIHFDADEKWAAMIITELSRYDTIDLLPTAIHEIGHILGLEHSWEKD---------- 111
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
S+MS F ++ D T DI +QK+YG S
Sbjct: 112 ---------SIMSPFYHYQTINDDGEYVKPTLTNCDISRIQKLYGNRNAS 152
>gi|301773288|ref|XP_002922069.1| PREDICTED: neutrophil collagenase-like [Ailuropoda melanoleuca]
Length = 475
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 60/219 (27%), Gaps = 54/219 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T D+ + + A WS LTF + S DIK
Sbjct: 119 WKETNLTYRIIKYTKQLSEADV-------ETAIKKAFQVWSNASPLTFTKISQGEPDIKI 171
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+N P +++FD + W L A HE
Sbjct: 172 AFVRGDHGDNSPFDGPNGILAHAFQPGQGIGGDVHFDADETWTQNSSNYN-LFLVAAHEF 230
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--S 186
GH+LGL H +M + +F +T +
Sbjct: 231 GHSLGLAHSTDPGA-------------------LM--------YPNYAFRDPSTYTLPQD 263
Query: 187 DIVAVQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTI 222
DI +Q IYG G I T+
Sbjct: 264 DINGIQTIYGPSSNPIQPTGPTTPTACDPSLTFDAITTL 302
>gi|302876330|ref|YP_003844963.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|302579187|gb|ADL53199.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
Length = 285
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----FKALEYIASHEDLI 453
F YL Y D+ + +HY+ +G KEGR P + Y+ + D+
Sbjct: 168 FSRTWYLSQYQDVAK----NGIDPYQHYLAYGKKEGRQPLPPIPTGYTDSGYLICNPDVA 223
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
A + G DH+ FG EGR T+
Sbjct: 224 AAV--NKGIFVSGLDHYYEFGWREGRKFTYS 252
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-----DAFKALEYI 530
EE + F YL Y D+ + +HY+ +G KEGR P + Y+
Sbjct: 161 EEMKIRAFSRTWYLSQYQDVAK----NGIDPYQHYLAYGKKEGRQPLPPIPTGYTDSGYL 216
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ D+ A + +G DH+ FG+ EGR T++
Sbjct: 217 ICNPDVAAAV--NKGIFVSGLDHYYEFGWREGRKFTYS 252
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------FDSYLYLGSYDDLRNVFGS 417
Y + Y+D+ + + + +H+ +G EGR + YL D+
Sbjct: 173 YLSQYQDVAK----NGIDPYQHYLAYGKKEGRQPLPPIPTGYTDSGYLICNPDVAAAVNK 228
Query: 418 DR-GAAARHYITHGVKEGRN 436
+ HY G +EGR
Sbjct: 229 GIFVSGLDHYYEFGWREGRK 248
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 14/99 (14%)
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI------TFNPD 570
E AF Y++ ++D+ D H+ +G +EGR +
Sbjct: 161 EEMKIRAFSRTWYLSQYQDVAKNGIDP-------YQHYLAYGKKEGRQPLPPIPTGYTDS 213
Query: 571 LYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALGIS 608
YL D+ + HY G +EGR S
Sbjct: 214 GYLICNPDVAAAVNKGIFVSGLDHYYEFGWREGRKFTYS 252
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 14/88 (15%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------TFDSYLYLGSY 492
AF Y++ ++D+ D H+ +G +EGR + YL
Sbjct: 167 AFSRTWYLSQYQDVAKNGIDP-------YQHYLAYGKKEGRQPLPPIPTGYTDSGYLICN 219
Query: 493 DDLRNVFGSDRG-AAARHYITHGVKEGR 519
D+ + HY G +EGR
Sbjct: 220 PDVAAAVNKGIFVSGLDHYYEFGWREGR 247
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 364 YTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDITFD 400
Y D+ + + +F + H+YEFG EGR T+
Sbjct: 215 YLICNPDVAAAVNKGIFVSGLDHYYEFGWREGRKFTYS 252
>gi|170742128|ref|YP_001770783.1| hypothetical protein M446_3984 [Methylobacterium sp. 4-46]
gi|168196402|gb|ACA18349.1| hypothetical protein M446_3984 [Methylobacterium sp. 4-46]
Length = 644
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 16/105 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y D+ G D H++ HG KEGR+P F Y+ ++ D+ A
Sbjct: 20 FDQTYYRLKNPDV-AASGVDL---LDHFLNHGWKEGRDPSRHFSVSGYLQANPDVAAANI 75
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF----VTFDSYLYLGSYDDLRNV 498
+ HF FG EGR + G Y D +
Sbjct: 76 NP-------LVHFWAFGLAEGRSGWQVAEAATAFQEGRYKDALSA 113
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 10/90 (11%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
+ ++ Y D+ + + HF G EGRD + F YL
Sbjct: 10 RSGVIASIGGFDQTYYRLKNPDVAA----SGVDLLDHFLNHGWKEGRDPSRHFSVSGYLQ 65
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ D+ H+ G+ EGR+
Sbjct: 66 ANPDVAAA----NINPLVHFWAFGLAEGRS 91
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 14/102 (13%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
+ F Y + D+ + D DHF N G++EGR + F+ YL +
Sbjct: 16 SIGGFDQTYYRLKNPDVAASGVD-------LLDHFLNHGWKEGRDPSRHFSVSGYLQANP 68
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLS 619
D+ H+ G+ EGR+ G + +
Sbjct: 69 DVAAA----NINPLVHFWAFGLAEGRS-GWQVAEAATAFQEG 105
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD Y D+ G D H++ HG KEGR+P F Y+ ++ D+ A
Sbjct: 19 GFDQTYYRLKNPDV-AASGVDL---LDHFLNHGWKEGRDPSRHFSVSGYLQANPDVAAAN 74
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRS 564
+ HF FG EGRS
Sbjct: 75 INP-------LVHFWAFGLAEGRS 91
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
+ F Y + D+ + D DHF N G +EGR + F YL +
Sbjct: 16 SIGGFDQTYYRLKNPDVAASGVD-------LLDHFLNHGWKEGRDPSRHFSVSGYLQANP 68
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRN 520
D+ H+ G+ EGR+
Sbjct: 69 DVAAA----NINPLVHFWAFGLAEGRS 91
>gi|220922698|ref|YP_002498000.1| hypothetical protein Mnod_2744 [Methylobacterium nodulans ORS 2060]
gi|219947305|gb|ACL57697.1| hypothetical protein Mnod_2744 [Methylobacterium nodulans ORS 2060]
Length = 133
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 400 DSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAF--KALEYIASHEDLINAF 456
D YL Y D++ + A +H++ +G EGR P + Y+ + D+ A
Sbjct: 43 DEQWYLERYQDVKAAIAAGSVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREYPDVRAAI 102
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFV 481
+ HF G EGR
Sbjct: 103 ESGE--IPDATTHFHTAGAREGRIP 125
Score = 71.3 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF---DSYLYLGSYDDLRN 497
Y+ ++D+ A A V+ K HF +G EGR D YL Y D+R
Sbjct: 43 DEQWYLERYQDVKAAIA--AGSVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREYPDVRA 100
Query: 498 VFGSDRGA-AARHYITHGVKEGRNP 521
S A H+ T G +EGR P
Sbjct: 101 AIESGEIPDATTHFHTAGAREGRIP 125
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 364 YTASYEDLIQVIGQDVFESM-KHFYEFGLSEGRDI---TFDSYLYLGSYDDLRNVFGSDR 419
Y Y+D+ I ++ +HF ++G EGR D YL Y D+R S
Sbjct: 47 YLERYQDVKAAIAAGSVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREYPDVRAAIESGE 106
Query: 420 GA-AARHYITHGVKEGRNP----DAFK 441
A H+ T G +EGR P F
Sbjct: 107 IPDATTHFHTAGAREGRIPYHGFSLFD 133
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA--FKALEYIASHEDL 536
V D YL Y D++ + A +H++ +G EGR P + Y+ + D+
Sbjct: 39 SVKVDEQWYLERYQDVKAAIAAGSVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREYPDV 98
Query: 537 INAF--ADAPDLVQAGKDHFSNFGYEEGR 563
A + PD HF G EGR
Sbjct: 99 RAAIESGEIPDATT----HFHTAGAREGR 123
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR---SITFNPDLYLTSY 576
N Y+ ++D+ A A V+ K HF +GY EGR I + YL Y
Sbjct: 38 NSVKVDEQWYLERYQDVKAAIAAG--SVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREY 95
Query: 577 DDLWNVFGSDRS-AAAQHYITHGMKEGR 603
D+ S A H+ T G +EGR
Sbjct: 96 PDVRAAIESGEIPDATTHFHTAGAREGR 123
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGISGMQFKSVMNLSEKS 622
S+ + YL Y D+ + A QH++ +G EGR ++ V L E
Sbjct: 39 SVKVDEQWYLERYQDVKAAIAAGSVKTAKQHFVKYGYFEGRL--PRPIEVDEVFYLREYP 96
Query: 623 RDKADLSL 630
+A +
Sbjct: 97 DVRAAIES 104
>gi|325982333|ref|YP_004294735.1| hypothetical protein NAL212_1700 [Nitrosomonas sp. AL212]
gi|325531852|gb|ADZ26573.1| hypothetical protein NAL212_1700 [Nitrosomonas sp. AL212]
Length = 2008
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + TI + G +GND+V G S N+ +GND +G G DT
Sbjct: 1632 LFGSGGDDTIGSLGGDDQTSGDTGNDIVFGGSGNDRLSGGNGNDRLNGGLGFDTAVLEGE 1691
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
Y+I + + + + + D L+D+E L+FA
Sbjct: 1692 LSDYRIEINNDNVTLTQLSNEETDTLTDIELLQFA 1726
>gi|325202620|gb|ADY98074.1| Iron-regulated protein frpA [Neisseria meningitidis M01-240149]
Length = 945
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 83/281 (29%), Gaps = 59/281 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-----------TILSHN 123
+D + N Y+ Y F + V+ Y G T
Sbjct: 597 DGNDTLIGGAGNDYLEGGSGSDTYVFGEGFSQDTVYNYDYATGRKDIIRFTDGITADMLT 656
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCAT 182
E H L ++ S +V SYF S +
Sbjct: 657 FTREGNHLL------------------IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 698
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+++ + + G++ Y+ +Y + GDDLL+
Sbjct: 699 GKVLDVATVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN------- 749
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
G N +I +++ G GND + G + N+ GND +
Sbjct: 750 ---------------GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLN 794
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G DT A + + + I QD + +
Sbjct: 795 GEDGNDTLIGGAGNDYLEGGSGSDTYIF--GKGFGQDTVYN 833
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 729 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 788
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 789 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYIFGKGFGQDTVYNYHVDKNSDTMHFKGF 848
Query: 390 GLS 392
+
Sbjct: 849 KAA 851
>gi|116694643|ref|YP_728854.1| RTX toxin exported protein [Ralstonia eutropha H16]
gi|113529142|emb|CAJ95489.1| RTX toxin exported protein [Ralstonia eutropha H16]
Length = 1552
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 13/153 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G+ I ++ + T+ SG + L +S+S++ G
Sbjct: 1347 GDDTINGGDGIDLLDFSDATGGVVFTLTQSG-------SPTTAGPGVTGLGADSYSNMEG 1399
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +++ GS+GNDV+ G + N+V +GNDV G +G DT S
Sbjct: 1400 VIGS------AFNDNLTGSAGNDVLRGGAGNDVLVGGAGNDVLTGGAGADTLTGGNGSDT 1453
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
++ R + A + + S + L +D
Sbjct: 1454 FRFLRADPASVDTITDFGAAPVASGGDVLDLSD 1486
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 71/190 (37%), Gaps = 10/190 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYE 257
G +G+++ + TI G D+LD + G ++ + + + + G
Sbjct: 1257 NGGIGDDVLRGGADN------DTIDGGVGIDMLDFSDATGAVSFTLIQSSTLVKVLVGAT 1310
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + +E V+GS+ D + G+SAN+V +G+D +G G+D + +
Sbjct: 1311 PGLGTDSYANMEGVIGSAFVDTLTGSSANDVIRGGAGDDTINGGDGIDLLDFSDATGGVV 1370
Query: 318 IYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++ D S++E + + + +L A + L+
Sbjct: 1371 FTLTQSGSPTTAGPGVTGLGADSYSNMEGVIGSAFNDNLTGSAGNDVLRGGAGNDVLVGG 1430
Query: 375 IGQDVFESMK 384
G DV
Sbjct: 1431 AGNDVLTGGA 1440
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 10/181 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ S G D + + + N + + + N + + V G SG+D +
Sbjct: 3 TLTGSNGSDSI--SGTTSADTILSGNGNDY--VSAGDGNDYVDAGNGDDIVEGGSGDDTL 58
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G + + F GND G +G D + + +A+ D + D L
Sbjct: 59 LGANGKDRVFGGLGNDNLSGGNGTDAVYGGGGDDVIGSIDGSSALYTGD---NGGDTLYG 115
Query: 341 VERLRFADQCIDSVNVKQRSILE--YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+AD + + + R + Y + +DLI + G G+D
Sbjct: 116 DGYDSYADYLLGAGHESARPGNDRIYGGNGDDLIYGDNGNNAALGGDDIIAG-GNGKDTI 174
Query: 399 F 399
+
Sbjct: 175 Y 175
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Query: 216 SPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESW--SSIGGYEKNMTIAQHTVIESVV 272
+ F T+ D GG +T+ KN L+ S+ S + G ++ + +
Sbjct: 1171 ATFSYTVEDGAGGSSTATVTVNVVDKNGFSLDQASYQASYLEGGSNPDSMTGAVAGDIFI 1230
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G D++ G + ++V + ND +G G D A + + + DA
Sbjct: 1231 GGRGTDILNGGNGDDVLRGGADNDTLNGGIGDDVLRGGADNDTIDGGVGIDMLDFSDATG 1290
Query: 333 HKQDFL 338
L
Sbjct: 1291 AVSFTL 1296
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 47/153 (30%), Gaps = 12/153 (7%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-- 252
YG + +I T+Y G D D L G ++ N +
Sbjct: 86 YGGGGDDVIGSIDGSSALYTGDNGGDTLYGDGYDSYADYLLGAGHESARPGNDRIYGGNG 145
Query: 253 ---IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
I G N I + G +G D + G N+ +G D G SG D F Y
Sbjct: 146 DDLIYGDNGNNAALGGDDI--IAGGNGKDTIYGEGGNDKIAGGAGGDTLSGGSGADVFVY 203
Query: 310 YAPSYLYK-----IYRFENAIIVYDANEHKQDF 337
A S I F+ + D D
Sbjct: 204 NAVSDSTAAGMDVITDFQRGVDHLDLRPVLGDT 236
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 60/190 (31%), Gaps = 15/190 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ ++ N+ D Q Y GG + +T +I G
Sbjct: 1183 GSSTATVTVNVVDKNGFSLDQASYQASYLEGGSNPDSMTGAVAGDIFI-----------G 1231
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + G + ND + G ++V + ND DG G+D + +
Sbjct: 1232 GRGTDILNGGNGDDVLRGGADNDTLNGGIGDDVLRGGADNDTIDGGVGIDMLDFSDATGA 1291
Query: 316 YKIYRFENAIIVY----DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+++ +V D +++E + + ++ A + +
Sbjct: 1292 VSFTLIQSSTLVKVLVGATPGLGTDSYANMEGVIGSAFVDTLTGSSANDVIRGGAGDDTI 1351
Query: 372 IQVIGQDVFE 381
G D+ +
Sbjct: 1352 NGGDGIDLLD 1361
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 63/206 (30%), Gaps = 27/206 (13%)
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIV----AVQKIYGAPKGSLGNNIYKI--EVQQK 214
+++S Y DIV + GA + ++
Sbjct: 21 TILSGNGNDYVSAGDGNDYVDAGNGDDIVEGGSGDDTLLGANG---KDRVFGGLGNDNLS 77
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-- 272
+Y GGDD++ ++ G Y N GY+ ES
Sbjct: 78 GGNGTDAVYGGGGDDVI-GSIDGSSALYTGDNGGDTLYGDGYDSYADYLLGAGHESARPG 136
Query: 273 -----GSSGNDVVIGNSANN-------VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
G +G+D++ G++ NN + +G D G G D A
Sbjct: 137 NDRIYGGNGDDLIYGDNGNNAALGGDDIIAGGNGKDTIYGEGGNDKIAGGAGGDTLSGGS 196
Query: 321 FENAII---VYDANEHKQDFLSDVER 343
+ + V D+ D ++D +R
Sbjct: 197 GADVFVYNAVSDSTAAGMDVITDFQR 222
>gi|38267|emb|CAA28858.1| unnamed protein product [Homo sapiens]
Length = 469
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEHERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 FTEYN-LHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|325139862|gb|EGC62394.1| iron-regulated protein FrpA [Neisseria meningitidis CU385]
Length = 984
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 508 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 565
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 566 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 621
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 622 ALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKD 681
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 682 IIRFTDGITAD 692
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 708 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 765
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 766 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 803
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 804 TLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 861
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 862 GEGFGQDTVYN 872
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 768 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 827
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 828 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 887
Query: 390 GLS 392
+
Sbjct: 888 KAA 890
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 415 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYD 474
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 475 YATGRKDIIRFTDGITAD 492
>gi|61368093|gb|AAX43101.1| matrix metalloproteinase 1 [synthetic construct]
Length = 470
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|302875676|ref|YP_003844309.1| calcium binding hemolysin protein, putative [Clostridium
cellulovorans 743B]
gi|307688114|ref|ZP_07630560.1| calcium binding hemolysin protein, putative [Clostridium
cellulovorans 743B]
gi|302578533|gb|ADL52545.1| calcium binding hemolysin protein, putative [Clostridium
cellulovorans 743B]
Length = 3083
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 2/158 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G I +++ G+ G+D++ G + ++ G D +G G D+ + +
Sbjct: 2500 GTSNGDIILGDIGADNLFGNGGDDILYGGAGDDKINGGDGKDELNGEEGNDSLYGGTGND 2559
Query: 315 LYKI--YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y ++ I YDA D +S V+ + D + N ++ + +
Sbjct: 2560 TYVFRKGFGQDTITDYDATRGNIDTISFVDGITKDDIELVRTNTTLEIRIKGSEDRITVS 2619
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
Q + ++ SE D + Y DD
Sbjct: 2620 QHYSTNGNNRIERIIFEDGSEITDFISNVTFYGTINDD 2657
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 7/148 (4%)
Query: 222 IYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
IY GDD +D TL G N L + S+ G N ++ +S+ G G
Sbjct: 722 IYAGAGDDHVDGEEGTDTLYGQDGNDEILGGDGIDSLFGGNGNDSLDGGNGNDSLYGEEG 781
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDANEHK 334
ND + G + + +GND DG G DT A + +Y + YD
Sbjct: 782 NDTIQGGTGVDNLLGGNGNDNLDGGLGNDTLDGNAGNDVYVFGIGSGKDTINNYDETSAY 841
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSIL 362
D + + + D VN IL
Sbjct: 842 TDIIKLKDGITLKDVKATRVNNNDLEIL 869
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 15/138 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + +IY + GDD + YI G N +I +
Sbjct: 1994 FDDKILTINDNLSIYGTEGDDT--FQGDSINETYI-----------GLGGNDSIYGNQGK 2040
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV- 327
+++ G++GND + G + + G D DG +G D + + Y I+
Sbjct: 2041 DNLHGNAGNDSIYGGDGIDNLYGDEGIDTLDGGAGDDNLYGGVGNDTYVFGLGYGEDIIN 2100
Query: 328 -YDANEHKQDFLSDVERL 344
+D E D L E +
Sbjct: 2101 DFDTEEGNIDTLRFGEGI 2118
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 9/155 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI----DLNTESWSS-IGGYEKNMTI 262
++ +++ + N I D+N I G +N I
Sbjct: 2823 TFGNDADKLTIADYYVNTNKVEVIQFADNSILDNQILSSLDINGTKEKDTIEGDSQNNVI 2882
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I+ + G++GND + G N+ + GND G +G D A Y
Sbjct: 2883 YGFEGIDELKGNAGNDTLYGGDGNDALYGGDGNDKLYGEAGDDVLEGGAGDDTYVFGINC 2942
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + ++L +D + +
Sbjct: 2943 GVDVISSSTGADTGT----DKLLISDVNYSDIAIS 2973
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I ++ TI I+++ GND + G N+ GND DG G+D+
Sbjct: 1528 INSFDGEDTIYGGNGIDTINAGKGNDELYGEDGNDTLNGLEGNDRLDGGLGVDSLNGGLG 1587
Query: 313 SYLY--KIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ Y I ++ I+ DA+E D + E +
Sbjct: 1588 NDTYIFGIGYGKDTILDIDASEDNIDTIILSEGIS 1622
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D+++ GG +N S + I + + +++ G GND++ GNS
Sbjct: 1094 GADIIN--SFGGTD---KINGGSGNDVIDAGAGDDVVYGDEGNDNIKGQEGNDLIYGNSG 1148
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ + GND DG DT +Y I+R + + D K + + +++ L+
Sbjct: 1149 VDDLYGGIGNDTLDGGEDNDTLSGGEGEDIY-IFRSGSGV---DTINDKGNTVGNIDILK 1204
Query: 346 F 346
F
Sbjct: 1205 F 1205
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Query: 205 NIYKIEVQQKDSPFIQT---IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y K +YD+ LD+ V I+ ES I + +
Sbjct: 1649 TNYYFSDSYKIENIKFANGELYDNEKIKTLDIYGTEIVDE-INTTDES-EVIKALAGSDS 1706
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ GND +I N+V + GND +G +G DT+ + S + I +
Sbjct: 1707 INSYGGNDTIFAGLGNDTIIAGDGNDVLYGEEGNDTLNGGAGSDTYVFSLGSGVDTINNY 1766
Query: 322 ENA 324
+ +
Sbjct: 1767 DTS 1769
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND 278
T+ S D L L G L + E I +++ + G D
Sbjct: 2307 DTVISSDKYDTLALYGTSGDDV---LEAGDCKDTVMALEGGDVIYGLGGDDTINAAGGKD 2363
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + ++V G+D+ +G G DT + +Y+ D + D
Sbjct: 2364 TLYGGTGSDVLNGEEGDDILNGQVGNDTLTGGNGNDIYQFEIGSG----TDTINNYSDAA 2419
Query: 339 SDVERLRFADQ 349
SD++ + F D+
Sbjct: 2420 SDIDTIEFGDR 2430
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 11/127 (8%)
Query: 222 IYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
I+ + G D+++ +G V + I+ + I G E + I + V G
Sbjct: 1267 IFGTEGIDVINTDDVGEVIDALEGADTIN-SMGGDDYINGREGDDVIKSGNGKDQVFGDE 1325
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G + N+ SGND G +G+DT E+A I+Y E
Sbjct: 1326 GNDFIYGGAGNDELDGGSGNDNIFGEAGVDTLKGGLGDD--TFEGGEDADIIY--GEDGV 1381
Query: 336 DFLSDVE 342
D + +
Sbjct: 1382 DTIYGQQ 1388
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+DS + LD+ G + I S +I G + + I+ + G GND +
Sbjct: 1829 IFDSEAINKLDI--NGTENDDIIKGESSPETILGLAGKDQLYGNGGIDKLYGGEGNDTLY 1886
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--KIYRFENAIIVYDANEHKQDFLS 339
G N+ + S +D DG G DT S Y I ++ I YD N + D +
Sbjct: 1887 GGVDNDELYGQSDDDTLDGGEGNDTLDGDIGSDTYIFTIGSGQDIITDYDLNANNSDTIK 1946
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G+ N TI +++ G GND + G + N++ G+D DG G DT+ +
Sbjct: 928 SIFGFGGNDTIYGQAGEDTIYGGKGNDNIYGGNNNDIIDGEEGDDYLDGGEGNDTYIF-- 985
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+I ++ I DA D L E + +
Sbjct: 986 -----RIGSGKDIINECDATSGNIDTLKFEEGISQS 1016
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 9/80 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDV---------VIGNSANNVFFESSGNDVFDGSSG 303
+ G N I ++++ G G+D + G + + GND DG +G
Sbjct: 1339 LDGGSGNDNIFGEAGVDTLKGGLGDDTFEGGEDADIIYGEDGVDTIYGQQGNDTIDGGAG 1398
Query: 304 LDTFFYYAPSYLYKIYRFEN 323
D Y
Sbjct: 1399 NDILLGGVGDDTYIFNIGSG 1418
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
IY G+D LD GG N ++ G + T + + G G D +
Sbjct: 1330 IYGGAGNDELD----GGSGNDNIFGEAGVDTLKGGLGDDTFEGGEDADIIYGEDGVDTIY 1385
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N+ +GND+ G G DT+ + S
Sbjct: 1386 GQQGNDTIDGGAGNDILLGGVGDDTYIFNIGSG 1418
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I GY + I +++ G +G D + N+ + GND +G G D
Sbjct: 1518 DIFGYGGDDQINSFDGEDTIYGGNGIDTINAGKGNDELYGEDGNDTLNGLEGNDRLDGGL 1577
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ I + +D + D++
Sbjct: 1578 GVDSLNGGLGNDTYIF--GIGYGKDTILDID 1606
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 32/82 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + V + ++ + +D V G N++ +GND G G DT+ +
Sbjct: 2177 LYGTDGPDIVKGGDVSDIIMALAEDDTVYGEGGNDIIDGGAGNDTLYGGVGNDTYIFQIG 2236
Query: 313 SYLYKIYRFENAIIVYDANEHK 334
S I + I D +
Sbjct: 2237 SGKDTIIEDDKTIGNIDVVKFG 2258
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG+ ND + G+ +++ GND G G DT+ Y +I + D
Sbjct: 4 VGNDSNDNLTGSINDDILDGKKGNDSLYGGRGNDTYIYNLGDGKDRITDNDPTADNVDTI 63
Query: 332 EHK 334
+
Sbjct: 64 KFG 66
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 13/155 (8%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ ++ + G +G++ + + ++ G D G G D
Sbjct: 703 ALVGTDKVDYIYGGNGDEPIYAGAGDDHVDGEEGTDTLYGQDGNDEILGGDGIDSL---- 758
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F + D L E ++L ++L +G D
Sbjct: 759 FGGNGNDSLDGGNGNDSLYGEE-----GNDTIQGGTGVDNLLGGN-GNDNLDGGLGNDTL 812
Query: 381 ESMK--HFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ Y FG+ G+D T ++Y +Y D+
Sbjct: 813 DGNAGNDVYVFGIGSGKD-TINNYDETSAYTDIIK 846
Score = 45.1 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 19/152 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N++I ++ G S N+ IG N+ + + G D G++G D+ +
Sbjct: 1998 ILTINDNLSIYGTEGDDTFQGDSINETYIGLGGNDSIYGNQGKDNLHGNAGNDSIYGGDG 2057
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + I D L V + + ED+I
Sbjct: 2058 IDNL----YGDEGIDTLDGGAGDDNLYG--------------GVGNDTYVFGLGYGEDII 2099
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ + G+ E DI F+ Y
Sbjct: 2100 NDFDTEEGNIDTLRFGEGIKE-EDIIFNRSDY 2130
Score = 45.1 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 271 VVGSSGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+G+ G+D ++ N+ N N +GND +G G DT+ + I +++
Sbjct: 145 AIGTPGDDNIVPNNQNGENFIDPLAGNDKMNGGKGNDTYIFGVGYGTDVIEDYDDTPNNV 204
Query: 329 DANEHKQDFLS 339
D + +
Sbjct: 205 DTIKFIKGLAR 215
Score = 44.7 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 45/220 (20%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---SIGGYEKN 259
GN+ Y + + SG D L G ++ +D E+ + +I G E
Sbjct: 979 GNDTYIFRIGSGKDIINECDATSGNIDTLKF-EEGISQSSLDFRRENRNLIITIDGIEDR 1037
Query: 260 MTI---------------AQHTVIESVV-------GSSGNDVVIGNSANNVFFESSGNDV 297
+ I A +V+++ + G+ D + ++ + V G D+
Sbjct: 1038 VFIRNYFLPESKIEKIEFADGSVLDNEILSKLIIYGTIDGDEINSDNVDEVIKALEGADI 1097
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ G D + + + ++ + + D + E
Sbjct: 1098 INSFGGTDKINGGSGNDVIDAGAGDDVVY----GDEGNDNIKGQE--------------- 1138
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ + +DL IG D + + EG DI
Sbjct: 1139 GNDLIYGNSGVDDLYGGIGNDTLDGGEDNDTLSGGEGEDI 1178
Score = 44.3 bits (103), Expect = 0.073, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 20/116 (17%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN----------------- 295
+ G N I + ++ + G GND + G + + N
Sbjct: 2695 LNGQTGNDYIYGESGVDQLYGEEGNDYLYGGEDEDFLYGGDDNDFLYGGEGNDGLDGGNG 2754
Query: 296 -DVFDGSSGLDTFFYYAPSYLYKI--YRFENAIIVYDANEHKQDFLSDVERLRFAD 348
D G G D + S Y ++ I YD E D + E + AD
Sbjct: 2755 NDTLSGDGGDDNLSDSSGSDTYVFDKGYGKDTITDYDEIEGNTDTIKFGESINKAD 2810
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 8/147 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
N +I ++ + + Y + G++ ++ + D + + G +
Sbjct: 2600 RTNTTLEIRIKGSEDRITVSQHYSTNGNNRIERIIFEDGSEITDFISNV--TFYGTINDD 2657
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-- 318
T+ + + G D V G + ++ + S D +G +G D + +
Sbjct: 2658 TLDGDSNKNIIKALEGADTVNGGANDDEIYGGSDGDFLNGQTGNDYIYGESGVDQLYGEE 2717
Query: 319 ---YRFENAIIVYDANEHKQDFLSDVE 342
Y + + DFL E
Sbjct: 2718 GNDYLYGGEDEDFLYGGDDNDFLYGGE 2744
>gi|325132404|gb|EGC55097.1| iron-regulated protein FrpA [Neisseria meningitidis M6190]
Length = 1295
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 619 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 676
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 677 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 714
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 715 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 772
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 773 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 820
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 819 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 876
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 877 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 914
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 915 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGSSGSDTYVF-- 972
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 973 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1020
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1019 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1076
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1077 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1114
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1115 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1172
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1173 GKGFGQDTVYN 1183
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 526 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 585
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 586 YATGRKDIIRFTDGITAD 603
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1079 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 1138
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1139 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1198
Query: 390 GLS 392
+
Sbjct: 1199 KAA 1201
>gi|30583961|gb|AAP36229.1| Homo sapiens matrix metalloproteinase 1 (interstitial collagenase)
[synthetic construct]
gi|54697160|gb|AAV38952.1| matrix metalloproteinase 1 (interstitial collagenase) [synthetic
construct]
gi|60654101|gb|AAX29743.1| matrix metalloproteinase 1 [synthetic construct]
gi|60654103|gb|AAX29744.1| matrix metalloproteinase 1 [synthetic construct]
gi|60830074|gb|AAX36910.1| matrix metalloproteinase 1 [synthetic construct]
gi|61368096|gb|AAX43102.1| matrix metalloproteinase 1 [synthetic construct]
Length = 470
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|180665|gb|AAA35699.1| skin collagenase precursor [Homo sapiens]
Length = 469
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 63/208 (30%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W +RY+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLRYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|47215736|emb|CAG05747.1| unnamed protein product [Tetraodon nigroviridis]
Length = 560
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 66/213 (30%), Gaps = 52/213 (24%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
++ ++ W ++ + + ++ E R A W V+ LTF
Sbjct: 97 DKCITQII----WRSFLVHPSFYFSSASIENYTPKVGKQATYEAIRKAFKVWESVIPLTF 152
Query: 71 EE---------TSIHSDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKAD 108
E ++DI G++ + + +FD A+
Sbjct: 153 REIPYSQIKNKVDRYADIMLSFAEGFHGDSSPFDGEGGFLAHAFFPGNGIGGDTHFDLAE 212
Query: 109 VWRYGIGKG-TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
W G +G + A+HE+GHALGL H + +M+ F
Sbjct: 213 PWTVGPDQGGNDVFLVAVHELGHALGLEHSNDPSA-------------------IMAPFY 253
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D +Q IYG+ G
Sbjct: 254 QWFETENFQ------LPDDDRRGIQAIYGSKSG 280
>gi|47227660|emb|CAG09657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 401
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
Query: 52 QEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM---------- 100
+ V R AL WS V LTF E S +DI+ + + +D +
Sbjct: 54 RRVFREALKIWSDVTPLTFTEIHSGKADIRIDFTRYWHGDNLPFDGPGGILAHAFFPKTH 113
Query: 101 ---EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+I+FD + W G GT L A HE GH LGL H Y
Sbjct: 114 RQGDIHFDYDESWTLGNHMGTDLLQVAAHEFGHVLGLQHSREPGAIMSAY 163
>gi|332837591|ref|XP_003313324.1| PREDICTED: interstitial collagenase isoform 1 [Pan troglodytes]
Length = 403
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 65/208 (31%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ +A+ A WS V
Sbjct: 28 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV------DHAIAK-AFQLWSNVTP 80
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 81 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 140
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 141 F-REYNLYRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 172
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 173 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 200
>gi|257094275|ref|YP_003167916.1| outer membrane adhesin like protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046799|gb|ACV35987.1| outer membrane adhesin like proteiin [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 5854
Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D L V + I + +I G N +A + + G GND + G+ +
Sbjct: 3684 GSDDGDRLLGSVVDDRIAGGSGDD-TIFGARGNDALAGGEGNDRLDGGEGNDHLQGDGGD 3742
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ GND G +G D S +Y R + ++ D+ D
Sbjct: 3743 DALSGGEGNDHLRGGAGNDVLIGGPGSDVYHFSRGDGHDLIADSTIQPADV 3793
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 2/124 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G D D L G + + + + G E N + + + + G +GND + G
Sbjct: 3050 NGNGDFRDNVLTGDATSRLLVGRAGNDVLAGSEGNDNLDGGSGADQLDGGAGNDALSGGD 3109
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++V F +GND+ DG G D A D S + L
Sbjct: 3110 GDDVLFGGAGNDLLDGGRGADRLDGGAGDDYVNSREAAGGSAAADTIVFAYG--SGADTL 3167
Query: 345 RFAD 348
+D
Sbjct: 3168 TASD 3171
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 48/170 (28%), Gaps = 23/170 (13%)
Query: 214 KDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ T+ GG D L D ++ + I + + +
Sbjct: 4077 EGGDGNDTLDGGGGADTLLGGRGDDTYVVDNAADTIVERRGEGNDTLRSSLSQALTAEVS 4136
Query: 268 IES----------VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY- 316
+E+ G GN+ ++GN+ NN +G+D DG +G D +Y
Sbjct: 4137 VENIELTGAANLYAFGDDGNNRLLGNAGNNALRGYAGDDTLDGGAGADVLQGGTGDDVYV 4196
Query: 317 ------KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+I A +VE L +
Sbjct: 4197 ADSVLDRIEEAPGAGSDSVRASASHTLADNVENLTLTGSAAIDGTGNSGA 4246
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 73/183 (39%), Gaps = 11/183 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMT 261
Y T++ +GG+D L D + G L+ + + G + N T
Sbjct: 1283 YHGADFLDGGSGKDTLWGNGGNDTLLGGLDADKLQGGDGADLLDGGTGEDELFGEDGNDT 1342
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G G D++ G++ ++ F +GND G G D A +Y +
Sbjct: 1343 LLGGLDADKLQGGEGGDLLDGSTGDDALFGDAGNDTLIGGPGCDYLVGDAGDDVYLLASG 1402
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS---ILEYTASYEDLIQVIGQD 378
++ +E D + + + F D +D++ + Q +++Y A +D + ++G
Sbjct: 1403 DSPRDASGLSETLTDSAGN-DTIVFRDASVDALRLTQNGDALLIDYGA--DDHLWIVGGA 1459
Query: 379 VFE 381
Sbjct: 1460 GGA 1462
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G ++ +GNDV DG G D +Y + V + +
Sbjct: 3969 GGAGNDRLSGGDGDDELRGGAGNDVLDGGFGADALIGGPGDDVY---LADELDTVLELAD 4025
Query: 333 HKQDFLSDV 341
D L V
Sbjct: 4026 GGTDTLRMV 4034
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 42/149 (28%), Gaps = 10/149 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + V + + G SG+D + G N+ GND DG G D
Sbjct: 3682 LAGSDDGDRLLGSVVDDRIAGGSGDDTIFGARGNDALAGGEGNDRLDGGEGNDHLQGDGG 3741
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFA---DQCIDSVNVKQRSILEYTA 366
+ D L + F+ + + + Q + ++
Sbjct: 3742 DDALS----GGEGNDHLRGGAGNDVLIGGPGSDVYHFSRGDGHDLIADSTIQPADVDTLE 3797
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ + + SE R
Sbjct: 3798 FGPGIAPFDVLHRVVDGQLLLDIAGSEDR 3826
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 29/83 (34%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL S + + T + + G G+D + G + ++ GND DG G
Sbjct: 2063 DLEALVASPTAVGDGADIVVGTTADDLLAGLGGDDELFGQAGDDTLVGGRGNDALDGGEG 2122
Query: 304 LDTFFYYAPSYLYKIYRFENAII 326
DT+ Y +I
Sbjct: 2123 NDTYIYAPGDGADRIIDTAGGDS 2145
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 32/194 (16%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+++Y + GG D L + + V+ S N I
Sbjct: 4008 GDDVYLADELDTVLELAD-----GGTDTLRMVALTDVEL-----PAEIESFEAL-GNAAI 4056
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G++ ++ ++G A N GND DG G DT Y +
Sbjct: 4057 -------DLTGNAADNRLLGTRAANRIEGGDGNDTLDGGGGADTLLGGRGDDTYVVD--N 4107
Query: 323 NAIIVYDANEHKQDFLS-----------DVERLRFAD-QCIDSVNVKQRSILEYTASYED 370
A + + D L VE + + + + L A
Sbjct: 4108 AADTIVERRGEGNDTLRSSLSQALTAEVSVENIELTGAANLYAFGDDGNNRLLGNAGNNA 4167
Query: 371 LIQVIGQDVFESMK 384
L G D +
Sbjct: 4168 LRGYAGDDTLDGGA 4181
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 46/147 (31%), Gaps = 3/147 (2%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+I + + + G +G+D + G+S ++V G D G +G DT A + + Y
Sbjct: 2479 SIYGSSRNDVIDGLAGSDWIEGSSGDDVLDGGVGADRLFGDAGDDTLTGGASAVDDRHYE 2538
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D L D + + I + + +
Sbjct: 2539 YAYDQYGDGFHVTSHDRLQGG---AGNDTYVIQADSGFDEITDAEGANRIVFGAGLSAEN 2595
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ G E R YL +
Sbjct: 2596 VIVSERNNLGWPETRVDYGPGAFYLAA 2622
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 13/136 (9%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S+ G ++ + +VG +GNDV+ G+ N+ SG D DG +G D
Sbjct: 3047 AASNGNGDFRDNVLTGDATSRLLVGRAGNDVLAGSEGNDNLDGGSGADQLDGGAGNDALS 3106
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
F A D L D V R +A+
Sbjct: 3107 GGDGDD----VLFGGAGNDLLDGGRGADRL---------DGGAGDDYVNSREAAGGSAAA 3153
Query: 369 EDLIQVIGQDVFESMK 384
+ ++ G
Sbjct: 3154 DTIVFAYGSGADTLTA 3169
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 16/143 (11%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA--------NNVFFESSGNDVFDGSSG 303
S+ G + N ++ + ++++G +G+D + G+ + SG D G+ G
Sbjct: 1244 SLDGGDGNDSLWGNGGADTLLGGAGDDALSGDDGKTPAPYHGADFLDGGSGKDTLWGNGG 1303
Query: 304 LDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVN 355
DT + + E D L D ++L+ +
Sbjct: 1304 NDTLLGGLDADKLQGGDGADLLDGGTGEDELFGEDGNDTLLGGLDADKLQGGEGGDLLDG 1363
Query: 356 VKQRSILEYTASYEDLIQVIGQD 378
L A + LI G D
Sbjct: 1364 STGDDALFGDAGNDTLIGGPGCD 1386
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 4/123 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G +G+D + GN N++ + NDV G G D A ++
Sbjct: 1173 DLLLGGAGDDWLFGNGGNDLLDGGADNDVAFGDDGDDELVGAAGDDALSGDDLDDPDDPD 1232
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFY 387
L + L D L A + L G+ F
Sbjct: 1233 SGLSGS---LHGKDSLDGGDGNDSLWGNGGADTLLGGAGDDALSGDDGKTPAPYHGADFL 1289
Query: 388 EFG 390
+ G
Sbjct: 1290 DGG 1292
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 33/86 (38%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + VVG++ +D++ G ++ F +G+D G G D + Y +
Sbjct: 2073 AVGDGADIVVGTTADDLLAGLGGDDELFGQAGDDTLVGGRGNDALDGGEGNDTYIYAPGD 2132
Query: 323 NAIIVYDANEHKQDFLSDVERLRFAD 348
A + D D L + AD
Sbjct: 2133 GADRIIDTAGGDSDVLEIGAGIAAAD 2158
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 16/142 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----- 323
+++ G +GND + G A + G D+ DG +G D++ + A L + N
Sbjct: 3348 DTLYGGAGNDSLYGGDAADFLVGDGGADLIDGGAGDDSYRFDADDTLVFGFDSGNDRFFE 3407
Query: 324 ---------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++++ D + D++ L + S L D
Sbjct: 3408 LPSHLEAAPGTVRFESDVSPSDVVLDLQSLTLTGGRLLVRLKAVPSTLGSFLVTID--AA 3465
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
G + + F + + EGRD
Sbjct: 3466 SGLPIIGTRFVFADGTVVEGRD 3487
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + D ++G +V G+D DG +G DT+ + A I
Sbjct: 2209 VRAATPGDDADYLVGGDGPDVLAGGRGDDTLDGGTGDDTYRFEAGDGGDHIVD------- 2261
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L + D I + + Y ++ ++Q E
Sbjct: 2262 ----RDGDDTLRFGAGITADDVQIVAGETGDVVLQRYGSADSVVLQRGPGVPSEP 2312
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 35/123 (28%), Gaps = 9/123 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G IA + V +G D + G +++ F SG+D G +
Sbjct: 2659 ITGSRGPDVIAGGDGHDLVHAGAGRDEIEGGEGDDLLFGESGDDTLHDDRGWNHLSGGLG 2718
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYED 370
+ Y A D LS L D D + ++
Sbjct: 2719 NDNLS-------GTGYLAGGPGSDTLSGSGMLDGGAGDDWYDIRGAGATIVFATGDGHDR 2771
Query: 371 LIQ 373
+I
Sbjct: 2772 VIA 2774
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 1/95 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIV 327
+ + G G+D + G ++ +GND +G +G D Y F +
Sbjct: 3538 DLLSGGPGSDSLFGGGEDDALHGDAGNDWLEGGAGNDWLSGGDGVDTYHFDGHFGLDTVA 3597
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D + + + D + ++L
Sbjct: 3598 GGMVRTSDDAIEFGDGIAPDDVSVRLAAGGSSTLL 3632
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G+ G+DV++G+ ++ +G+DV DG G D++F+ + + V D+
Sbjct: 1946 VQGTPGDDVLVGHDWDDTLAGQAGDDVLDGGEGSDSYFFASG---------DGRDTVSDS 1996
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVK 357
D + + + D + +
Sbjct: 1997 GVSGDDVIRFADGIAPGDLTLARNDTD 2023
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 13/137 (9%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI---IV 327
V GS+ ++ + G S ++ G D G G D++FY A + ++ +
Sbjct: 1635 VAGSAASETIRGTSVDDRIDGRGGADTLLGGRGSDSYFYAAGDGNDVVDDSGDSADHDTL 1694
Query: 328 YDANEHKQDFLSDVE-----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L+ + FAD + + S V S
Sbjct: 1695 RLGPGIGVDTLTLTHSRHDLTIAFADGGSVVLRGQVDGAGRGVES-----VAFADGVSWS 1749
Query: 383 MKHFYEFGLSEGRDITF 399
+H G F
Sbjct: 1750 AEHLLSAATFVGAGPLF 1766
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 74/216 (34%), Gaps = 31/216 (14%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G+++Y + + S +T+ DS G+D + + N ++ G
Sbjct: 1390 GDAGDDVYLLASGDSPRDASGLSETLTDSAGNDTIVFRDASVDALRLTQNGDALLIDYGA 1449
Query: 257 EKNMTIAQHTV--IESVVGSSGN----DVVIGNSAN----------NVFFESSGNDVFD- 299
+ ++ I IE + G D +IG A+ +V F +G+D+
Sbjct: 1450 DDHLWIVGGAGGAIEQFRFADGTTLTTDELIGRLADAPVTSDAGGRSVRFGGAGDDLLSA 1509
Query: 300 --------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSDVERLRFAD 348
G G DT + S Y+ + + + D L D R
Sbjct: 1510 LLPGALLAGGRGSDTLIGSSGSDTYRYSVGDGSDRLVDPGPATDAAGVPLVDTLRFGAGI 1569
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D ++ ++ +D I + G D +++
Sbjct: 1570 TADDLTLGIGSLLIRVGSNPDDAIHIEGFDPDDALA 1605
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +GND++ G + SG+D + DT A Y +
Sbjct: 2895 GGDGSDLLTGDAGNDLIDGGDGADQLLGGSGDDSLRAGA-DDTLDGGAGRDSYTL--AGG 2951
Query: 324 AIIVYDANEHKQDFLSDVER 343
+ D LS E
Sbjct: 2952 TQTLRFGPGSGADTLSWSES 2971
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G +++ +GND+ DG G D + + + + A
Sbjct: 2891 DRLFGGDGSDLLTGDAGNDLIDGGDGADQLLGGSGDDSLR--AGADDTLDGGAGRDSYTL 2948
Query: 338 LSDVERLRFADQCIDSV 354
+ LRF
Sbjct: 2949 AGGTQTLRFGPGSGADT 2965
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + + G G D ++G S ++ + +D DG +G D++
Sbjct: 2893 LFGGDGSDLLTGDAGNDLIDGGDGADQLLGGSGDDSLRAGA-DDTLDGGAGRDSYTLAGG 2951
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + A + + ++ VE
Sbjct: 2952 TQTLRFGPGSGADTLSWSESSRRGARLIVE 2981
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 13/98 (13%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE--------SSG-----NDVFDGS 301
G + N +++ + V+G GND + G + +++ + +G +DV DG
Sbjct: 1769 GSDGNDSLSADDGADRVLGLLGNDTITGGAGDDLLYGAGDTSPGDDAGAFVVDDDVIDGG 1828
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+G DT + D +
Sbjct: 1829 AGNDTLDGGFLGDFDVLSGGTGDDTYVFRRGSGYDQIV 1866
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 24/66 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G G D + G + N+ + D G G D A Y+ + + +
Sbjct: 3339 DRIHGLGGKDTLYGGAGNDSLYGGDAADFLVGDGGADLIDGGAGDDSYRFDADDTLVFGF 3398
Query: 329 DANEHK 334
D+ +
Sbjct: 3399 DSGNDR 3404
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 73/215 (33%), Gaps = 37/215 (17%)
Query: 197 APKGSLGNNIYKIEVQ-----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--DLNTES 249
A S G+ Y ++ D TIY GDD+ GG I D + +
Sbjct: 1012 AAPTSTGDTYYSYDLAHIFDESTDGSGDDTIYTGAGDDV--AMGEGGDDILILEDGDDRA 1069
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGS-----SGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
W G + + + +VG +G D + G ++V F +G DV G +G
Sbjct: 1070 W----GAAGDDLLLGGAGKDFLVGDTRADLAGADYLDGGDGDDVLFAGAGEDVLLGGAGD 1125
Query: 305 DTFFYYAPSYLY--------KIYRFENAIIV--------YDANEHKQDFLSD--VERLRF 346
D + + ++ RF+N V Y D L + F
Sbjct: 1126 DNLWGDGRAGFAMHGWTVSRQVARFDNLTRVQTVFEQAAYGVGPGANDLLLGGAGDDWLF 1185
Query: 347 ADQCIDSVNVKQRSILEYTASYED-LIQVIGQDVF 380
+ D ++ + + + +D L+ G D
Sbjct: 1186 GNGGNDLLDGGADNDVAFGDDGDDELVGAAGDDAL 1220
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 23/222 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--WSSI 253
G + + +Y + + GGDD ++ G + +DL + + ++
Sbjct: 830 GIAEVGRRDVVYDSSAADRIAT-------GGGDD--NVYRKRGGDDVVDLGEGNDDFWTL 880
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + G +G D + S + G D GSS D + A
Sbjct: 881 DGTSGRV---------HAFGGAGRDYLGAGSGRDTVEGGEGGDFVYGSSDDDQLYGDAQG 931
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ A D D + F D + L +D +
Sbjct: 932 ETADLIAAGADQAASGAQGDLVD-AEDGDDEVFTGAGNDLIAGGDGDDLIVAGGGDDWVW 990
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + ++ ++E T Y DL ++F
Sbjct: 991 GDWNVWAPIEEPWRDWTVTEKAAPTSTGDTYYS--YDLAHIF 1030
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS---YLYKIYRFENAIIV 327
+VGS GND + + + GND G +G D + + + ++ +I
Sbjct: 1767 LVGSDGNDSLSADDGADRVLGLLGNDTITGGAGDDLLYGAGDTSPGDDAGAFVVDDDVID 1826
Query: 328 YDANEHKQD--FLSDVERLR 345
A D FL D + L
Sbjct: 1827 GGAGNDTLDGGFLGDFDVLS 1846
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 50/165 (30%), Gaps = 39/165 (23%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----- 254
G G++ Y+ E I D GDD L G + + + +
Sbjct: 2241 GGTGDDTYRFEAGDGGDH----IVDRDGDDTLRF-GAGITADDVQIVAGETGDVVLQRYG 2295
Query: 255 ---------------------GYEKNMTIAQHTV-----IESVV---GSSGNDVVIGNSA 285
+++ A TV +E+ ++G+D + G+S
Sbjct: 2296 SADSVVLQRGPGVPSEPPRSLPLIEHVEFADGTVWSADDVENYATRPATTGSDTLDGSSR 2355
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ + G+D+ G G D + + I D+
Sbjct: 2356 SEIIDGLGGDDLVSGGGGGDRYVFRQGYGRLTISDSGADAGQSDS 2400
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 72/237 (30%), Gaps = 46/237 (19%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
I+ + ++ G + + Q+ S T+ + D +D GG + +
Sbjct: 3470 IIGTRFVFADGTVVEGRDAFARLHHQRTSSASDTLIGTTASDAID----GGAGDDVLFAG 3525
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+ G ++ +S+ G +D + G++ N+ +GND G G+DT+
Sbjct: 3526 GGDDSVSGGPGRDLLSGGPGSDSLFGGGEDDALHGDAGNDWLEGGAGNDWLSGGDGVDTY 3585
Query: 308 FYYAPSYLYKI----------------YRFENAIIVYDANEHKQDFLSDVER-------- 343
+ L + + + V A L DV
Sbjct: 3586 HFDGHFGLDTVAGGMVRTSDDAIEFGDGIAPDDVSVRLAAGGSSTLLLDVPAVAGRVQVD 3645
Query: 344 ------------------LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+RFAD + +L + + L+ + D
Sbjct: 3646 EGWQPGAPGEGARLALAEIRFADGTRWTTAEVAARLLAGSDDGDRLLGSVVDDRIAG 3702
Score = 44.7 bits (104), Expect = 0.057, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 28/121 (23%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-----DGS------SGLDTFFYYAP 312
+ +VG G DV+ G ++ +G+D + DG G DT + A
Sbjct: 2214 PGDDADYLVGGDGPDVLAGGRGDDTLDGGTGDDTYRFEAGDGGDHIVDRDGDDTLRFGAG 2273
Query: 313 --SYLYKIYRFENAIIVY---------------DANEHKQDFLSDVERLRFADQCIDSVN 355
+ +I E +V L +E + FAD + S +
Sbjct: 2274 ITADDVQIVAGETGDVVLQRYGSADSVVLQRGPGVPSEPPRSLPLIEHVEFADGTVWSAD 2333
Query: 356 V 356
Sbjct: 2334 D 2334
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ GS D ++G+ ++ SG+D G+ G D +
Sbjct: 3677 VAARLLAGSDDGDRLLGSVVDDRIAGGSGDDTIFGARGNDALAGGEGNDRLD----GGEG 3732
Query: 326 IVYDANEHKQDFLSDVE 342
+ + D LS E
Sbjct: 3733 NDHLQGDGGDDALSGGE 3749
Score = 44.0 bits (102), Expect = 0.081, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 52/163 (31%), Gaps = 19/163 (11%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF--ESS 293
G V Y L + + G + TI +V + + G G D ++G ++ +F
Sbjct: 1619 DGSVLTYAGLLARGF-DVAGSAASETIRGTSVDDRIDGRGGADTLLGGRGSDSYFYAAGD 1677
Query: 294 GNDVFDG--------------SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
GNDV D G+DT + I + +V
Sbjct: 1678 GNDVVDDSGDSADHDTLRLGPGIGVDTLTLTHSRHDLTIAFADGGSVVLRGQVDGAG--R 1735
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
VE + FAD S + A L+ G D +
Sbjct: 1736 GVESVAFADGVSWSAEHLLSAATFVGAGPLFLVGSDGNDSLSA 1778
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 55/189 (29%), Gaps = 33/189 (17%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGY 256
P S GN ++ V D+ + + G+D+L G + +L+ S + + G
Sbjct: 3046 PAASNGNGDFRDNVLTGDAT-SRLLVGRAGNDVL-----AGSEGNDNLDGGSGADQLDGG 3099
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-------------------- 296
N ++ + + G +GND++ G + +G+D
Sbjct: 3100 AGNDALSGGDGDDVLFGGAGNDLLDGGRGADRLDGGAGDDYVNSREAAGGSAAADTIVFA 3159
Query: 297 ------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
S LD + + + + D L LR D
Sbjct: 3160 YGSGADTLTASDSLDVIALAEGVAAASVAVRATGDDLLLSLDGASDTLRLRGWLRAGDHL 3219
Query: 351 IDSVNVKQR 359
Sbjct: 3220 TTLRFADGS 3228
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 8/112 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
S + + G+S N+V +G+D +GSSG D + +++ +
Sbjct: 2471 APASEAAESIYGSSRNDVIDGLAGSDWIEGSSGDDVLDGGVGAD--RLFGDAGDDTLTGG 2528
Query: 331 NEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D +A DQ D +V L+ A + + E
Sbjct: 2529 ASAVDD-----RHYEYAYDQYGDGFHVTSHDRLQGGAGNDTYVIQADSGFDE 2575
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-NNVFFESSGNDVFDGSSGLDTFFYY 310
+G + IA+ + V SS D + +NV+ + G+DV D G D F+
Sbjct: 821 DLGNVITDPGIAEVGRRDVVYDSSAADRIATGGGDDNVYRKRGGDDVVDLGEGNDDFWTL 880
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTAS 367
+ +++ F A Y +D + E F + Q + A+
Sbjct: 881 DGTSG-RVHAFGGAGRDYLGAGSGRDTVEGGEGGDFVYGSSDDDQLYGDAQGETADLIAA 939
Query: 368 YEDLIQVIGQDVFESMKH 385
D Q +
Sbjct: 940 GADQAASGAQGDLVDAED 957
>gi|313682331|ref|YP_004060069.1| outer membrane adhesin like proteiin [Sulfuricurvum kujiense DSM
16994]
gi|313155191|gb|ADR33869.1| outer membrane adhesin like proteiin [Sulfuricurvum kujiense DSM
16994]
Length = 3343
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 71/326 (21%), Positives = 118/326 (36%), Gaps = 55/326 (16%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
V + + E++ + S+ + + YF+ N D+ D+ T+ ++
Sbjct: 746 VTLVNWAESANRIE-NVRFSDGSSLDFSQVIKDYFITNNDDRIDLTASSDIINTLAGNDV 804
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC---A 181
+H GL + NGG + D ND+++ ++ +D + D S
Sbjct: 805 VH------GLGGSDTLNGGEGDDTLYGDEGNDTYIYNL---GDGKDIITDLSGADSLRFG 855
Query: 182 TPMVSDIVAVQKIYGAPK-----------GSLGNNIYKIEVQQKDSPFIQTIYDSGGD-- 228
+ ++++AV+ + LG+ I I+ S I+ I S G
Sbjct: 856 AGITAELIAVRYLANGDMMIALKDADKTFEELGDTI-TIKGWSNASNRIEQILLSDGTAL 914
Query: 229 ------------DLLDLTLIGGVKNYI--DLNTESWSS---IGGYEKNMTIAQHTVIESV 271
D L G V N + D S S I G N TI SV
Sbjct: 915 SIDTLQVGSEGADTLFFGDSGIVFNALGGDDRVTSGSGADVIDGGSGNDTINAGNGANSV 974
Query: 272 VGSSGNDVVI---------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
G G+D ++ G S ++ +GND GSSG+DT + LY R +
Sbjct: 975 HGGEGDDTLMSGSGADSLEGGSGADILSAGAGNDTLSGSSGVDTLQGGGGNDLYLYVRGD 1034
Query: 323 NAIIVYDANEHKQDFLSDVERLRFAD 348
V D E D L+ E + +D
Sbjct: 1035 GKDTVID--EAGADTLAFGEGIAQSD 1058
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 59/168 (35%), Gaps = 21/168 (12%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ D+ A+Q + N +Y F T+ GGDD + I G +
Sbjct: 1110 IIDLAAIQSV----TEGADNLVYG--------DFTTTVDALGGDDTV----ITGTAADM- 1152
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L+ S + + + T+ +++ GND + G + + +GND G+ G
Sbjct: 1153 LHGGSGNDTLRSSAGDDTLYGDAGSDTLYAGIGNDTLSGGDGADTLYGENGNDTLAGNGG 1212
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDA---NEHKQDFLSDVERLRFAD 348
DT + Y+ E I D D L E + +
Sbjct: 1213 NDTLSGGLGNDTYRFALGEGKDIFIDEYSYGSGDNDTLHFGEGITADN 1260
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 10/113 (8%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D D + G ID N T+ +++ G +GND++I N
Sbjct: 1320 GGTDGDDYLVFGDSDTVID----------ALGGNDTVITANGNDTLGGGTGNDILISNGG 1369
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
N+ SG D +G G DT+ + +I + D L
Sbjct: 1370 NDTLSGGSGADTLEGGGGSDTYRFGIGDGKDRITDSSGLDSLIFGEGIIADNL 1422
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SGG D D L G N L + G E N T++ + + G +GND + G++
Sbjct: 3112 SGGKD--DDILFGNDGNDTLLGDTENDLLVGGEGNDTLSGGDGADILYGDNGNDTLSGDA 3169
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+ F +GND G +G D + ++ ++ +
Sbjct: 3170 GNDKLFGGNGNDTLFGGNGNDLLSGGEGTNTLSGGSGDDTYLIIKGTPNTTIT 3222
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 4/139 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N T+ ++V G GND ++ N+ SG+D G +G DT+ +
Sbjct: 1498 VDALGGNDTLITGDGADTVNGGDGNDTLLSGKGNDTLSGGSGSDTLKGGTGNDTYLFNRG 1557
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I+ I QD L + + + + +
Sbjct: 1558 DGADTIFDELGNDIFTFGEGITQDDL----IFKQQGNTLLIGIAEVNKTFDQLSDVVTFT 1613
Query: 373 QVIGQDVFESMKHFYEFGL 391
D HF +
Sbjct: 1614 DWFKTDTNVESLHFADGSF 1632
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ + T+ GG + I + ++ G +N + +++ G G D++ G++ N+
Sbjct: 3105 NTKNNTVSGGKDDDILFGNDGNDTLLGDTENDLLVGGEGNDTLSGGDGADILYGDNGNDT 3164
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+GND G +G DT F + L + D
Sbjct: 3165 LSGDAGNDKLFGGNGNDTLFGGNGNDLLS----GGEGTNTLSGGSGDDT 3209
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I L + I G KN T++ + + G+ GND ++G++ N++ GND G
Sbjct: 3092 IALGNNHDNLISGNTKNNTVSGGKDDDILFGNDGNDTLLGDTENDLLVGGEGNDTLSGGD 3151
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDVE 342
G D + + + + + N+ + D LS E
Sbjct: 3152 GADILYGDNGNDTLSGDAGNDKLFGGNGNDTLFGGNGNDLLSGGE 3196
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 13/171 (7%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDV 279
T YD DL + + +L +++ + + T+ T + + G SGND
Sbjct: 1104 TFYDGSIIDL--AAIQSVTEGADNLVYGDFTTTVDALGGDDTVITGTAADMLHGGSGNDT 1161
Query: 280 V---------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G++ ++ + GND G G DT + + N +
Sbjct: 1162 LRSSAGDDTLYGDAGSDTLYAGIGNDTLSGGDGADTLYGENGNDTLA-GNGGNDTLSGGL 1220
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
F + F D+ + ++L+ +
Sbjct: 1221 GNDTYRFALGEGKDIFIDEYSYGSGDNDTLHFGEGITADNLVARAVSGSND 1271
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 2/113 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + E + G+ G+D + G S ++ +G+D +G G DT
Sbjct: 2480 TLSGNSGNDLLYGADGGEVLNGNGGDDYLRGLSGDDRLDAGNGDDTLNGEVGADTLEGGM 2539
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ Y + + ++ D D L +++ D I Y
Sbjct: 2540 GNDYYLFDKGDGKDLIID--TGGIDTLYFGKKISRRDLIITEEGEDLVVTFGY 2590
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S N TI + + GNDV+ G N+V S+G+D S+G D + Y
Sbjct: 1798 SFETNGGNDTINAGGGNDRIDAGIGNDVIEGGDGNDVITMSAGDDTVTDSAGDDVYLYNR 1857
Query: 312 PSYLYKIYR-FENAIIVYDANEHKQDFLSDVE 342
+Y N +++ +D L V+
Sbjct: 1858 GDGQDTVYDLGGNDKVMFGEGISVEDVLVQVQ 1889
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G + + + +++ GND + N+V GNDV S+G DT
Sbjct: 1788 NTVVGTVTDESFETNGGNDTINAGGGNDRIDAGIGNDVIEGGDGNDVITMSAGDDTVTDS 1847
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
A +Y R + VYD D + E + D
Sbjct: 1848 AGDDVYLYNRGDGQDTVYDL--GGNDKVMFGEGISVED 1883
Score = 44.7 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 2/127 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IG IA ++++ + N+ V G +++ F + GND G + D
Sbjct: 3083 IGTSGSFFGIALGNNHDNLISGNTKNNTVSGGKDDDILFGNDGNDTLLGDTENDLLVGGE 3142
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + N+ + ++L + +L L
Sbjct: 3143 GNDTLSGGDGADILYGDNGNDTLSGDAGN-DKLFGGNGNDTLFGGNGNDLLSGGEGTNTL 3201
Query: 372 IQVIGQD 378
G D
Sbjct: 3202 SGGSGDD 3208
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G++ + V GNDV GSSG D + Y + I + + + + D +
Sbjct: 662 TINGSAGSTVL-AGEGNDVLRGSSGNDVYLYRRGDGVDTIIDGGGSDTLRLTDILQSDII 720
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 59/242 (24%), Gaps = 86/242 (35%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYID----------------- 244
+ +Y + T+ G+D L G +ID
Sbjct: 1196 DTLYGENGNDTLAGNGGNDTLSGGLGNDTYRFALGEGKDIFIDEYSYGSGDNDTLHFGEG 1255
Query: 245 ----------------------------------LNTESWSSIGGYEKNMTIAQHTVIES 270
+ ++W +N ++ T I
Sbjct: 1256 ITADNLVARAVSGSNDLQIAICESGKGFDELSDVVTLKNWFDANKRIENFVLSDGTSISL 1315
Query: 271 VV---GSSGNDVVI------------GNS------ANNVFFES---------SGNDVFDG 300
G+ G+D ++ GN N+ GND G
Sbjct: 1316 SQMQGGTDGDDYLVFGDSDTVIDALGGNDTVITANGNDTLGGGTGNDILISNGGNDTLSG 1375
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SG DT S Y+ + + D++ D L E + AD I
Sbjct: 1376 GSGADTLEGGGGSDTYRFGIGDGKDRITDSS--GLDSLIFGEGI-IADNLIARFVSGSDD 1432
Query: 361 IL 362
+
Sbjct: 1433 LQ 1434
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 73/207 (35%), Gaps = 31/207 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----DLNTE------ 248
GS GN++Y + + TI D GG D L LT I + DL
Sbjct: 682 GSSGNDVY----LYRRGDGVDTIIDGGGSDTLRLTDILQSDIILRSSGTDLIIGCVEEGK 737
Query: 249 SWSSIGGYEKNMTIA-QHTVIESVVGSSGN---------DVVIGNSANNVFFESSGNDVF 298
++ +G + A IE+V S G+ D I N+ ++ ++ +D+
Sbjct: 738 TFEELGNTVTLVNWAESANRIENVRFSDGSSLDFSQVIKDYFITNN-DDRIDLTASSDII 796
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ +G D S ++ + + N+ L D + + DS+
Sbjct: 797 NTLAGNDVVHGLGGSDTLNGGEGDDTLYGDEGNDTYIYNLGDGKDIITDLSGADSLRFGA 856
Query: 359 R-----SILEYTASYEDLIQVIGQDVF 380
+ Y A+ + +I + D
Sbjct: 857 GITAELIAVRYLANGDMMIALKDADKT 883
>gi|268679619|ref|YP_003304050.1| Hemolysin-type calcium binding domain protein [Sulfurospirillum
deleyianum DSM 6946]
gi|268617650|gb|ACZ12015.1| Hemolysin-type calcium binding domain protein [Sulfurospirillum
deleyianum DSM 6946]
Length = 4798
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 10/175 (5%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE-VQQKDSPFIQTIYD 224
F + + +F T +DIV +Q A L + + Q +QT
Sbjct: 2002 FSTNNRVESFTFSDGTTLSTNDIVNLQGTEDADTVHLMDTTSDVTISMQGGDDVVQT--- 2058
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
SGG+D++D L L + + + G E N + + ++G G+D ++G
Sbjct: 2059 SGGNDIIDGGLGNDT-----LKGGAGNDTLLGAEGNDVLYGEKGDDVLLGGVGDDTLLGA 2113
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
N++ G+DV G +G DT+ Y S I + D L
Sbjct: 2114 EGNDILEGGMGSDVLQGGAGTDTYLYSKNSGTDTIIDTSGNDTLSFGEGIMSDDL 2168
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 16/164 (9%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN- 259
+ N I + + I + G D + + I L+ + +
Sbjct: 1803 NTNNRIENLTFSDGTTLSTNDIVNLQGTVDADTVHLLDSTSDITLSMQEGDDVVQTSGGS 1862
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI +++ +GND ++GN N+V + +GNDV +G G D A + Y
Sbjct: 1863 DTIDGGLGDDTINSGAGNDTLLGNEGNDVLYGEAGNDVLNGGKGADNLQGGAGNDTYIFK 1922
Query: 320 RFENAIIVYD---------------ANEHKQDFLSDVERLRFAD 348
R + + +YD + D LS E + AD
Sbjct: 1923 RGDGSDTIYDDSRYTPYYWYPSYVIQQDGGNDTLSFGEGITSAD 1966
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD + LIG + I L + I G ++N I +++ G++G+D++ G++ N
Sbjct: 4405 GDDNYN-WLIGHAGDDILLGSGGNDYISGGKENDLIVGGNGADNLQGNNGDDIIYGDNGN 4463
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ + GND G +G D F + + + N+
Sbjct: 4464 DQIYAGDGNDTLIGGTGADILFGENGDDTISGGSGNDTLYAGNGND 4509
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 22/162 (13%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGG 255
G++ Y + + SGG+D + DL + G + + N I G
Sbjct: 4404 SGDDNYNWLIGHAGDDI---LLGSGGNDYISGGKENDLIVGGNGADNLQGNNGDDI-IYG 4459
Query: 256 YEKNMTIAQHTVIESVVGS---------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
N I ++++G +G+D + G S N+ + +GND G +G D
Sbjct: 4460 DNGNDQIYAGDGNDTLIGGTGADILFGENGDDTISGGSGNDTLYAGNGNDTLSGGTGDDQ 4519
Query: 307 FFYYAPSYLYKIYRFENAIIVYDAN---EHKQDFLSDVERLR 345
S Y + + D + D + E +
Sbjct: 4520 INGSYGSDTYLFNIGDGNDTIVDTSVYGSSDTDTIIFGEGIT 4561
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 63/199 (31%), Gaps = 34/199 (17%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIV----AVQKIYGAPKGSLGNN--------------- 205
Y S D S Y + D + IYG K + GNN
Sbjct: 505 YANSATSHADTSGDYIVGGLGKDKIYGSDGNDTIYGDEKANQGNNSSLFSDSDTIKAYGG 564
Query: 206 ---IYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
+Y + +Y DD+L + +ID + + + G
Sbjct: 565 DDVVYGGNDSDIIEGGAGNDIVYGGDDDDVLFAGNKMFAMDADDGTHID--DGTTNYLSG 622
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N + + +++ G + +D + G S ++ G+D G G DT
Sbjct: 623 EDGNDKLHGGSGNDTLDGGNDDDTLWGGSGDDTLIGGEGDDSLYGGIGQDTLMGG---DD 679
Query: 316 YKIYRFENAIIVYDANEHK 334
Y Y N + D++
Sbjct: 680 YDTYLAGNGDTISDSDGSG 698
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 26/178 (14%)
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+ S ++ ++F + +F +D+V +Q A L ++ + +
Sbjct: 1447 SFSELSNKLTLTNWFSDASRIDTFTFNDGTVLSANDVVNLQGTENADTVHLLDSTSDVTL 1506
Query: 212 Q-QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ QT+ GG+D +D G + N T+ +
Sbjct: 1507 SLGLGNDVAQTL---GGNDTVD----------------------GGDGNDTLKGGAGNDL 1541
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G G D + G + N+ S ND+ G G DT+ + I ++
Sbjct: 1542 LKGGVGADALYGEAGNDTLEGGSDNDMLQGGEGNDTYIFGKGDGKDTIIDTSGENVLS 1599
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 46/138 (33%), Gaps = 1/138 (0%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-G 255
S + I + + G + D + + + L+ + +
Sbjct: 1458 TNWFSDASRIDTFTFNDGTVLSANDVVNLQGTENADTVHLLDSTSDVTLSLGLGNDVAQT 1517
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ +++ G +GND++ G + + +GND +G S D +
Sbjct: 1518 LGGNDTVDGGDGNDTLKGGAGNDLLKGGVGADALYGEAGNDTLEGGSDNDMLQGGEGNDT 1577
Query: 316 YKIYRFENAIIVYDANEH 333
Y + + + D +
Sbjct: 1578 YIFGKGDGKDTIIDTSGE 1595
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E ++ +DV+ GN N++ F GND DG +G D + Y + ++
Sbjct: 3269 EVIMALESDDVINGNGGNDLLFGQEGNDTLDGGAGDDILYGGEGDDTYIVTPNSGNDTIF 3328
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D+ D L E + D + +E T
Sbjct: 3329 DST--GVDRLLFAEGISADDVNVYFEGNDLYVEIEGT 3363
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG SG D + G ++ ++G+D+ G +G D + Y + A +++
Sbjct: 3721 DYLVGGSGTDEIYGREDDDTLLGNAGDDILVGEAGNDVLNGGLGNDTYGFGYGDGADVIH 3780
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D Q + V S + A + L G + +
Sbjct: 3781 DVATESQSSFAFV-----IGNDGISRWQAVTTEYSVDAGNDTLYFAAGISSSDLV 3830
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 44/154 (28%), Gaps = 27/154 (17%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+ GND++ G N+ +G+D+ G G DT+ S I+ +
Sbjct: 3278 DVINGNGGNDLLFGQEGNDTLDGGAGDDILYGGEGDDTYIVTPNSGNDTIFDSTGVDRLL 3337
Query: 329 DANEHKQDFL---------------------------SDVERLRFADQCIDSVNVKQRSI 361
A D + + +E F+D VN +
Sbjct: 3338 FAEGISADDVNVYFEGNDLYVEIEGTTLKLQDWYKADNRIESFSFSDGTTLGVNDILAFM 3397
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ Y ++ G G
Sbjct: 3398 VSDGDDYARTLEEGGTLETLEGNDALVGGSGNDT 3431
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + ++T + G + L V Y D+ S S + I
Sbjct: 1162 DTLEGFNDTLLLDTTLKTALSTNGINYSINALGEVVGTYGDVQEGS-SGNDTISGSGYIY 1220
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+++ GSSG DV+ G + ++V + NDV G G D + +
Sbjct: 1221 GGEGNDTLYGSSGKDVIDGGAGDDVIYGRDNNDVLRGGDGNDYIVAGSSTSD 1272
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMT-IAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
I LN + ++ + N T I + + SV G SG+DV+ ++ N++ S
Sbjct: 3863 NFTFSDGTI-LNATAIEALLFTQGNDTVIFKDNLNHSVSGLSGDDVITTSNGNDILEGGS 3921
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND +G G D + + I + Q L++
Sbjct: 3922 GNDTLNGGLGDDVYVFGRGDGKDIIAEVGGNEWWQTNGGNDQILLTN 3968
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 7/98 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFFYY 310
+ G N TI +++ +GND + G + +GND F+ G DT
Sbjct: 1674 VYGTVNNDTIKGTDNADTIYADAGNDTITGGLGADNLQGGAGNDTYVFNRGDGSDTI--- 1730
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ Y+ + D LS E + D
Sbjct: 1731 --TDDYRYAPYYWNTNYTIQGNGGNDTLSFGEGITTDD 1766
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND + ++ SGND +G SG DT+F+ I + +
Sbjct: 4636 DNIYGMGGNDRIYSYGGDDFLSGGSGNDFLEGGSGSDTYFFNQGDGNDTINEWASW---- 4691
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVK 357
N D + E + D
Sbjct: 4692 --NSSDVDEIKFAEGITKEDISFILSGTN 4718
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 11/123 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-LTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN I E + I D G D + GV N I+ +
Sbjct: 3503 GNRIESFEFYDGTVWSVADIIDHLGTQNDDVYNGLEGVDNIINARGG----------DDI 3552
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ + +++ G +G+D + ++V G+D+ G +G DT+ + I
Sbjct: 3553 ISTYESNDTLNGGTGSDALDAGGGDDVLNGEEGDDLLLGGAGNDTYLFNGNFGHDTIIDE 3612
Query: 322 ENA 324
N
Sbjct: 3613 AND 3615
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 48/168 (28%), Gaps = 43/168 (25%)
Query: 195 YG-APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
YG +GS GN+ T+Y S G D++D
Sbjct: 1200 YGDVQEGSSGNDTISGSGYIYGGEGNDTLYGSSGKDVID--------------------- 1238
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIG-------NSANNVFFESSGNDVFDG------ 300
G + I + + G GND ++ N +++ GND G
Sbjct: 1239 -GGAGDDVIYGRDNNDVLRGGDGNDYIVAGSSTSDSNYGHDILEGGKGNDTLIGTARNST 1297
Query: 301 -----SSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--EHKQDFLSDV 341
G DT I++ D N D + D+
Sbjct: 1298 YVYNYGDGYDTIIDSGNIGATTDVLSLRGIVLSDLNFRTSGNDVIIDI 1345
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 10/168 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I + IA + V G + +IG++ +++ S GND G D
Sbjct: 4385 INEIKYGGYIAFDSKDHLVSGDDNYNWLIGHAGDDILLGSGGNDYISGGKENDLIVGGNG 4444
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYT 365
+ + ++ I + N+ D L + F + D+++ + Y
Sbjct: 4445 ADNLQGNNGDDIIYGDNGNDQIYAGDGNDTLIGGTGADILFGENGDDTISGGSGNDTLYA 4504
Query: 366 AS-YEDLIQVIGQDVFESM--KHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + L G D Y F + +G D D+ +Y S D
Sbjct: 4505 GNGNDTLSGGTGDDQINGSYGSDTYLFNIGDGNDTIVDTSVYGSSDTD 4552
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 38/176 (21%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL------------TLIGGVKNYIDLNT 247
G G + Y TI D+ G+D L + L
Sbjct: 2130 GGAGTDTYLYSKNSGTD----TIIDTSGNDTLSFGEGIMSDDLIVKASTNSNDLIVALKE 2185
Query: 248 ES--------------WSSIGGYEKNMTIAQHTV-----IESVVGSSGN-DVVIGNSANN 287
E W ++ + + + + I ++ ++ + D + AN+
Sbjct: 2186 EGKSFDELSDKIVLKDWFNVNNRIETFSFSDGAILGAQDITNLQTATADGDYLRYTEAND 2245
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLSDV 341
V GND G G D + + + I +N I + A D + V
Sbjct: 2246 VIEGKEGNDTLVGGDGDDVYLFGRGDGIDTIIDIAKDNDSIAFKAGISLDDIVVQV 2301
Score = 40.9 bits (94), Expect = 0.82, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 55/194 (28%), Gaps = 39/194 (20%)
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT------ 221
+ D FG + +YG G++ Y + + +
Sbjct: 3281 NGNGGNDLLFGQEGNDTLDGGAGDDILYG----GEGDDTYIVTPNSGNDTIFDSTGVDRL 3336
Query: 222 IYDSG-----------GDD--------LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
++ G G+D L L N I+ + S+S N +
Sbjct: 3337 LFAEGISADDVNVYFEGNDLYVEIEGTTLKLQDWYKADNRIE--SFSFSDGTTLGVNDIL 3394
Query: 263 AQ-----HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
A ++ + + GN A SGND G G D +
Sbjct: 3395 AFMVSDGDDYARTLEEGGTLETLEGNDA---LVGGSGNDTLMGGKGDDYYDISFKGNDIA 3451
Query: 318 IYRFENAIIVYDAN 331
+ N + +DA+
Sbjct: 3452 LDSSGNDTLYFDAS 3465
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 43/142 (30%), Gaps = 37/142 (26%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGND------------- 296
+I G + TI +++ G G D + G + N+ F G+D
Sbjct: 1682 TIKGTDNADTIYADAGNDTITGGLGADNLQGGAGNDTYVFNRGDGSDTITDDYRYAPYYW 1741
Query: 297 ----VFDGSSGLDTFFYYAPSYLYKIY-----RFENAIIVYDANEHKQDFLSD------- 340
G+ G DT + I + I+ D LSD
Sbjct: 1742 NTNYTIQGNGGNDTLSFGEGITTDDIIVKASATSNDLIVALKEEGKSFDELSDKIVLKDW 1801
Query: 341 ------VERLRFADQCIDSVNV 356
+E L F+D S N
Sbjct: 1802 FNTNNRIENLTFSDGTTLSTND 1823
Score = 38.2 bits (87), Expect = 5.2, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 72/248 (29%), Gaps = 56/248 (22%)
Query: 136 HPGSYNGGYPVYGVDNDYEN---DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
H +NGG VD + D + +S D ++ Y P+ +
Sbjct: 2929 HSLDFNGGMNNITVDGNGALLNVDGNGNNTISLTNEDDILVINGNYYNEGPVGYAKASGV 2988
Query: 193 KIYGAPKGSLG------------NNIYKIEVQQK-----DSPFIQTIYDSGGDDLLDLTL 235
+G + G ++ Y E D +I G ++++
Sbjct: 2989 SSHGTNHITAGEGSDMIASVGFSSDTYVFEKGDGVDRLYDMSGYDSIVFGEGITTSNISV 3048
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIA-----QHTVIESVV------------------ 272
++ D++ ++++ + + T+A +E +
Sbjct: 3049 SVLMETMGDIDVKNYADYISLDSDTTLASLVIRYGDNLEDQIILTDWYNTGRVESFVFSD 3108
Query: 273 -------------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
GSS +++V+G N SG+D+ G D + +
Sbjct: 3109 GTRLSDHEIVGLLGSSESEMVVGTEGENTLEGRSGDDIVSAGEGDDIYVFGRGDGHDTFM 3168
Query: 320 RFENAIIV 327
+
Sbjct: 3169 ETGGFDTI 3176
>gi|54697154|gb|AAV38949.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|61357929|gb|AAX41472.1| matrix metalloproteinase 1 [synthetic construct]
Length = 469
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|115613147|ref|XP_001179971.1| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
gi|115934038|ref|XP_001194230.1| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
Length = 506
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 68/201 (33%), Gaps = 48/201 (23%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF-EETS 74
++L + W + ++ D R + D+ + + + + AL W LTF EET
Sbjct: 67 YVLANSRWEKTDLTWRID---GSRPTPDLEA--DHVKRIMKNALQFWDDASALTFREETG 121
Query: 75 IHSDIKFIS------SNNGYVCTPRYDSRYFM----------EINFDKADVWRYGIGKGT 118
+DI+ + + F + +FD ++ + G GT
Sbjct: 122 GDADIQISFAVGEHGDTYDFDGPGGTLAHAFYPTSPPVSIAGDAHFDDSETFSDGSAAGT 181
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HE GH+LGL H + +M + +
Sbjct: 182 NLLQVAIHEFGHSLGLQHSDVNDA-------------------IMYPYYR-------GYI 215
Query: 179 YCATPMVSDIVAVQKIYGAPK 199
T DI +Q +YG
Sbjct: 216 PDITLDRDDIAGIQALYGENT 236
>gi|4505215|ref|NP_002412.1| interstitial collagenase isoform 1 preproprotein [Homo sapiens]
gi|116852|sp|P03956|MMP1_HUMAN RecName: Full=Interstitial collagenase; AltName: Full=Fibroblast
collagenase; AltName: Full=Matrix metalloproteinase-1;
Short=MMP-1; Contains: RecName: Full=22 kDa interstitial
collagenase; Contains: RecName: Full=27 kDa interstitial
collagenase; Flags: Precursor
gi|30126|emb|CAA38691.1| type I interstitial collagenase [Homo sapiens]
gi|1688258|gb|AAB36941.1| collagenase [Homo sapiens]
gi|15530201|gb|AAH13875.1| Matrix metallopeptidase 1 (interstitial collagenase) [Homo sapiens]
gi|30582587|gb|AAP35520.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|54112080|gb|AAV28732.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|60818387|gb|AAX36462.1| matrix metalloproteinase 1 [synthetic construct]
gi|61362913|gb|AAX42300.1| matrix metalloproteinase 1 [synthetic construct]
gi|61362918|gb|AAX42301.1| matrix metalloproteinase 1 [synthetic construct]
gi|119587435|gb|EAW67031.1| matrix metallopeptidase 1 (interstitial collagenase) [Homo sapiens]
gi|123979652|gb|ABM81655.1| matrix metallopeptidase 1 (interstitial collagenase) [synthetic
construct]
gi|123994457|gb|ABM84830.1| matrix metallopeptidase 1 (interstitial collagenase) [synthetic
construct]
gi|208965212|dbj|BAG72620.1| matrix metallopeptidase 1 [synthetic construct]
Length = 469
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|58176727|pdb|1SU3|A Chain A, X-Ray Structure Of Human Prommp-1: New Insights Into
Collagenase Action
gi|58176728|pdb|1SU3|B Chain B, X-Ray Structure Of Human Prommp-1: New Insights Into
Collagenase Action
Length = 450
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 75 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 127
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 128 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 187
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 188 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 219
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 220 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 247
>gi|262192333|ref|ZP_06050487.1| rTX toxin putative [Vibrio cholerae CT 5369-93]
gi|262031759|gb|EEY50343.1| rTX toxin putative [Vibrio cholerae CT 5369-93]
Length = 1175
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 80/244 (32%), Gaps = 35/244 (14%)
Query: 136 HPGSYNGGYPV---YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y GG V D +N + S+ Y+ +++ + T D V
Sbjct: 872 HPNEYVGGGGVDSFLLNKTDGDNANLNISLSGYWEGGNALGNTVQNVGVT---IDTDLVI 928
Query: 193 KIYGAPKG------SLGNNIYKIEVQQKDSPF--------------IQTIYDSGG---DD 229
+ N +Y S I D G D
Sbjct: 929 HSGDSNDYIELGISRADNTVYTGSSIPNSSNSTPSQSTLANSAFMKNDVITDQDGKLLDS 988
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+L + + + ++L + + ++ G N+ +++G GND + G + N+
Sbjct: 989 VLKDSHLQPTTDTVNLGSGND-TVYGGGGNLAAYGGAGNNTLIGGDGNDALRGGADNDYL 1047
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVERL 344
GNDV G SG D S + ++ + ++ + DF +++
Sbjct: 1048 SGGRGNDVLRGDSGNDVLIGGLGSDILTGGSGDDLFKWVDGDLDNSKDRITDFTIGQDKI 1107
Query: 345 RFAD 348
+D
Sbjct: 1108 DLSD 1111
>gi|224043578|ref|XP_002198044.1| PREDICTED: similar to matrix metalloproteinase 1 preproprotein
[Taeniopygia guttata]
Length = 466
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 59/192 (30%), Gaps = 47/192 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T D+ E R AL WS V LTF++ +DI
Sbjct: 109 WKRNNLTYRILNYTPKMRRADV-------DEAVRRALSVWSNVTPLTFQKVEGEIADIMI 161
Query: 82 IS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
NG + +++ D+ + W G+G L HE+
Sbjct: 162 SFAYRDHRDNSPFDGPNGQLAHAFQPGEGLGGDVHMDEEEAWTKD-GRGYNLFIVLAHEL 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + SY P + + DI
Sbjct: 221 GHSLGLSHSNDPGA---------------LMYPTYSYTDPSEFRLPQ----------DDI 255
Query: 189 VAVQKIYGAPKG 200
+Q IYG
Sbjct: 256 DGIQAIYGRANA 267
>gi|62898123|dbj|BAD97001.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 469
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|261868477|ref|YP_003256399.1| hemolysin A [Aggregatibacter actinomycetemcomitans D11S-1]
gi|293390491|ref|ZP_06634825.1| hemolysin A [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261413809|gb|ACX83180.1| hemolysin A [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290951025|gb|EFE01144.1| hemolysin A [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 1055
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 12/140 (8%)
Query: 193 KIYGAPK-----GSLGNNI-YKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
YG+ G G+++ Y + + I+ G+D L GG N
Sbjct: 728 HFYGSRFNDVFHGHDGDDVIYGYDGDDRLYGDNGNDEIHGGKGNDKL----YGGAGNDRL 783
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + G E + + + + G SGND + GN +++ G+D G G
Sbjct: 784 FGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGKGDDQLAGGEGN 843
Query: 305 DTFFYYAPSYLYKIYRFENA 324
D + Y + I
Sbjct: 844 DIYVYRKEYGHHTITEHSGD 863
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + G +GND + G NN G+D +G +G D +
Sbjct: 756 LYGDNGNDEIHGGKGNDKLYGGAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSG 815
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ F N D L+ E
Sbjct: 816 NDKL----FGNQGDDLLDGGKGDDQLAGGE 841
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 10/141 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N H + + G G+D + G++ N+ GND G +G D F
Sbjct: 729 FYGSRFNDVFHGHDGDDVIYGYDGDDRLYGDNGNDEIHGGKGNDKLYGGAGNDRLFGEYG 788
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ Y + + D L + +L+ + L
Sbjct: 789 NN----YLDGGEGDDHLEGGNGSDILRG------GSGNDKLFGNQGDDLLDGGKGDDQLA 838
Query: 373 QVIGQDVFESMKHFYEFGLSE 393
G D++ K + ++E
Sbjct: 839 GGEGNDIYVYRKEYGHHTITE 859
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 15/131 (11%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
++ Y IY GDD L G N I G + N
Sbjct: 727 DHFYGSRFNDVFHGHDGDDVIYGYDGDDRL----YGDNGND---------EIHGGKGNDK 773
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GN+ + G ++ +G+D+ G SG D F L +
Sbjct: 774 LYGGAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGKG 833
Query: 322 ENAIIVYDANE 332
++ + + N+
Sbjct: 834 DDQLAGGEGND 844
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 14/140 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS NDV G+ ++V + G+D G +G D + + A
Sbjct: 727 DHFYGSRFNDVFHGHDGDDVIYGYDGDDRLYGDNGNDEIHGGKGNDKL----YGGAGNDR 782
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
E+ ++L E IL + + L G D+ + K +
Sbjct: 783 LFGEYGNNYLDGGE------GDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGKGDDQ 836
Query: 389 FGLSEGRDITFDSYLYLGSY 408
EG DI Y+Y Y
Sbjct: 837 LAGGEGNDI----YVYRKEY 852
>gi|149202525|ref|ZP_01879497.1| 5'-nucleotidase [Roseovarius sp. TM1035]
gi|149143807|gb|EDM31841.1| 5'-nucleotidase [Roseovarius sp. TM1035]
Length = 551
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 8/152 (5%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSG-GDDLL-----DLTLIGGVKNYIDLNTESWS 251
G+ G+++ + G G+D L + ++ G N + +
Sbjct: 331 GTTGDDVMGAGFGDDVVSGGLGNDVVAGGAGNDTLEGGDGNDSMSGSFGNDLISGGDGAD 390
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IGG TI + V G G+D + G + N+ ND DG SG DT A
Sbjct: 391 DIGGGTGRDTIDAGAGNDRVGGGEGDDSIQGGAGNDFLAGGGRNDTIDGGSGADTINGGA 450
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + NE + D ++D +
Sbjct: 451 GNDRMTGGAGADQFVFSAFNEGETDVITDFQD 482
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 225 SGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
SGG+D L D G + I+ + +I + N + +SV G GND
Sbjct: 269 SGGNDTLRGGEGNDTIAGGDGDDSIEAGGGND-NISASDGNDFVDAGAGNDSVGGGLGND 327
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + ++V G+DV G G D A + + +++ + D +
Sbjct: 328 TIFGTTGDDVMGAGFGDDVVSGGLGNDVVAGGAGNDTLEGGDGNDSM----SGSFGNDLI 383
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRD 396
S D D R ++ A + + G D + F G GR+
Sbjct: 384 SG------GDGADDIGGGTGRDTIDAGAGNDRVGGGEGDDSIQGGAGNDFLAGG---GRN 434
Query: 397 ITFDS 401
T D
Sbjct: 435 DTIDG 439
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 36/129 (27%), Gaps = 10/129 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ +++ G G+D + N+ S GND D +G D+
Sbjct: 266 LEGSGGNDTLRGGEGNDTIAGGDGDDSIEAGGGNDNISASDGNDFVDAGAGNDSVGGGLG 325
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ F D +S LE + +
Sbjct: 326 ND----TIFGTTGDDVMGAGFGDDVVSG------GLGNDVVAGGAGNDTLEGGDGNDSMS 375
Query: 373 QVIGQDVFE 381
G D+
Sbjct: 376 GSFGNDLIS 384
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 50/198 (25%), Gaps = 34/198 (17%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS--IGGYEKNM 260
S + G+D + + T+ G + D+ + + G N
Sbjct: 297 GGNDNISASDGNDFVDAGAGNDSVGGGLGNDTIFGTTGD--DVMGAGFGDDVVSGGLGND 354
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANN------------------VFFESSGNDVFDGSS 302
+A +++ G GND + G+ N+ +GND G
Sbjct: 355 VVAGGAGNDTLEGGDGNDSMSGSFGNDLISGGDGADDIGGGTGRDTIDAGAGNDRVGGGE 414
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D+ A + D D+ Q
Sbjct: 415 GDDSIQGGAGND---FLAGGGRNDTIDGGSGADTINGG----AGNDRMTGGAGADQFVFS 467
Query: 363 EYTASYEDLIQVIGQDVF 380
+ D+I +
Sbjct: 468 AFNEGETDVITDFQDGID 485
>gi|126313949|ref|XP_001373438.1| PREDICTED: similar to matrix metalloproteinase-28 [Monodelphis
domestica]
Length = 528
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 62/194 (31%), Gaps = 47/194 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIK 80
W + Y+ + P + + A WS V L F E S +DI+
Sbjct: 138 WYKRHLSYRLVNWPEYLPE-------PAVRRAVQAAFQVWSNVSSLEFWEAPASSPADIR 190
Query: 81 FISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNALHEI 128
+N + + F E +FD+ + W + +G L HEI
Sbjct: 191 LTFFQGDHNDGLSNAFDGPGGALAHAFFPRRGEAHFDRDERWSFQSRRGRNLFVVLAHEI 250
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH LGL H + Y DS L D+
Sbjct: 251 GHTLGLGHSPAPRALMAPYYKRL--GRDSVLN------------------------WDDV 284
Query: 189 VAVQKIYGAPKGSL 202
+A+Q++YG P G
Sbjct: 285 LAIQRLYGQPLGGS 298
>gi|281341736|gb|EFB17320.1| hypothetical protein PANDA_011008 [Ailuropoda melanoleuca]
Length = 437
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 60/193 (31%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---ETSI 75
R WS + Y+ T ++ ++ R A WS V L F E +
Sbjct: 108 RTLKWSKTNLTYRIVNYTPDLTHSEV-------EKAFRKAFKVWSDVTPLNFTRLHEGTA 160
Query: 76 HSDIKFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
I F + ++G P Y + +FD + W KG L A
Sbjct: 161 DIMISFGTKDHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 219
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GH+LGL H + + +Y M+
Sbjct: 220 AHEFGHSLGLDHSKDPGA---------------LMFPIYTYTGKSHFMLPE--------- 255
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 256 -DDVQGIQFLYGP 267
>gi|323139733|ref|ZP_08074771.1| hypothetical protein Met49242DRAFT_4159 [Methylocystis sp. ATCC
49242]
gi|322395004|gb|EFX97567.1| hypothetical protein Met49242DRAFT_4159 [Methylocystis sp. ATCC
49242]
Length = 136
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 400 DSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAF--KALEYIASHEDLINAF 456
D YL Y+D+ + +AA HY +G KE R P Y + D++ A
Sbjct: 43 DEDWYLARYEDVGRAIEAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIVAAI 102
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
D + + G+ HF G EGR + L+ G
Sbjct: 103 EDN--IFESGQQHFERSGFAEGRLPYPNFSLFRG 134
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA--FKALEYIASHEDL 536
+ D YL Y+D+ + +AA HY +G KE R P Y + D+
Sbjct: 39 SIRVDEDWYLARYEDVGRAIEAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDI 98
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGR 563
+ A D + ++G+ HF G+ EGR
Sbjct: 99 VAAIEDN--IFESGQQHFERSGFAEGR 123
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF---DSYLYLGSYDDLRN 497
Y+A +ED+ A V +H+ +G +E R D Y Y D+
Sbjct: 43 DEDWYLARYEDVGRAIE--AGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIVA 100
Query: 498 VFGSDRG-AAARHYITHGVKEGRNPDAFKALE 528
+ + +H+ G EGR P +L
Sbjct: 101 AIEDNIFESGQQHFERSGFAEGRLPYPNFSLF 132
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 364 YTASYEDLIQVIGQDVFESMK-HFYEFGLSEGRDI---TFDSYLYLGSYDDLRNVFGSDR 419
Y A YED+ + I S H+ +G E R D Y Y D+ +
Sbjct: 47 YLARYEDVGRAIEAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIVAAIEDNI 106
Query: 420 -GAAARHYITHGVKEGRNPDAFKALE 444
+ +H+ G EGR P +L
Sbjct: 107 FESGQQHFERSGFAEGRLPYPNFSLF 132
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT---FNPDLYLTSY 576
+ Y+A +ED+ A V + +H+ +GY+E R + D Y Y
Sbjct: 38 SSIRVDEDWYLARYEDVGRAIEAG--FVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQY 95
Query: 577 DDLWNVFGSDR-SAAAQHYITHGMKEGR 603
D+ + + QH+ G EGR
Sbjct: 96 PDIVAAIEDNIFESGQQHFERSGFAEGR 123
Score = 42.0 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGISGMQFKSVMNL 618
SI + D YL Y+D+ + AA+HY +G KE R +
Sbjct: 39 SIRVDEDWYLARYEDVGRAIEAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQ 94
>gi|119384856|ref|YP_915912.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119374623|gb|ABL70216.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 946
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 6/177 (3%)
Query: 211 VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ T+ G+DLL + +L G ++ GY N +
Sbjct: 372 DTLRGGAGNDTLAGGDGNDLLFGGAGNDSLTSGAGADTLYGEGGDDTLAGYAGNDRLYGG 431
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++G +G+D ++G + N+ +GND G G D F + + +
Sbjct: 432 AGNDLLLGGAGHDSLVGGAGNDTLRGEAGNDTLAGGDGNDLLFGGTGNDSLTGGAGADTL 491
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N+ + + A + S++ A + L G D
Sbjct: 492 YGDGGNDTLAGYAGNDHLFGGAGNDLLLGGTGHDSLV-GGAGNDTLRGEAGNDTLAG 547
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 57/178 (32%), Gaps = 6/178 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+ G+D + +L GG ++ GY N +
Sbjct: 452 NDTLRGEAGNDTLAGGDGNDLLFGGTGNDSLTGGAGADTLYGDGGNDTLAGYAGNDHLFG 511
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ ++G +G+D ++G + N+ +GND G G D F A ++
Sbjct: 512 GAGNDLLLGGTGHDSLVGGAGNDTLRGEAGNDTLAGGDGNDLLFGGAGHDSLTSGAGDDT 571
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ N+ + + +R+ D L A + L G D
Sbjct: 572 LYGDGGNDTLAGYAGN-DRVFGGDGNDLLFGGAGHDSLVGGAGSDTLRGGEGNDTLAG 628
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 1/130 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + + + G +GND ++G + + +GND G G D F A
Sbjct: 338 LYGGDGNDRLFGGKGNDLLNGGNGNDYLVGGAGADTLRGGAGNDTLAGGDGNDLLFGGAG 397
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + ++ + + A + S++ A + L
Sbjct: 398 NDSLTSGAGADTLYGEGGDDTLAGYAGNDRLYGGAGNDLLLGGAGHDSLV-GGAGNDTLR 456
Query: 373 QVIGQDVFES 382
G D
Sbjct: 457 GEAGNDTLAG 466
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 16/187 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+ G+DLL +L G + ++ GY N +
Sbjct: 533 NDTLRGEAGNDTLAGGDGNDLLFGGAGHDSLTSGAGDDTLYGDGGNDTLAGYAGNDRVFG 592
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G +G+D ++G + ++ GND G +G DT + A L + +A
Sbjct: 593 GDGNDLLFGGAGHDSLVGGAGSDTLRGGEGNDTLAGGNGNDTLWGEAGDDLLQ----GDA 648
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES-M 383
D L E + +L ++ L G DV
Sbjct: 649 GDDLLEGGPGNDTLLGGEGYD------RLRGGEGNDMLMGGRGHDTLYGESGADVLHGDE 702
Query: 384 KHFYEFG 390
H +G
Sbjct: 703 GHDLLYG 709
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 9/146 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T++ GDDLL D L GG N L E + + G E N +
Sbjct: 623 NDTLAGGNGNDTLWGEAGDDLLQGDAGDDLLEGGPGNDTLLGGEGYDRLRGGEGNDMLMG 682
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G SG DV+ G+ +++ + G D G + DT + A +A
Sbjct: 683 GRGHDTLYGESGADVLHGDEGHDLLYGGDGGDTLFGGADNDTLYGQAGDDSLSGGPGNDA 742
Query: 325 IIVYDANEHKQDFLSDVERLRFADQC 350
+ D + + +
Sbjct: 743 LY----GGFGNDTVHGGDGHDLIEGG 764
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 58/200 (29%), Gaps = 24/200 (12%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y +Y G D L GG N ++ G + +
Sbjct: 687 DTLYGESGADVLHGDEGHDLLYGGDGGDTL----FGGADND---------TLYGQAGDDS 733
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
++ +++ G GND V G +++ GND+ G G DT
Sbjct: 734 LSGGPGNDALYGGFGNDTVHGGDGHDLIEGGPGNDMLYGDGGSDTLLGGLGDDFLDGGDG 793
Query: 322 ENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D LS + L ++E + L+ G D
Sbjct: 794 NDEL----HGGLGGDTLSGGAGHDSLFGDAGDDLLGGGDGHDLIEGGDGNDTLVGGRGCD 849
Query: 379 --VFESMKHFYEFGLSEGRD 396
V + F E D
Sbjct: 850 TLVGGLGADVFVFSAPEDLD 869
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 12/125 (9%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFEN 323
G+ GND+++ ++ +G+D+ G +G DTF + I FE
Sbjct: 154 GTGGNDMMMASAGTRGLDGGAGDDILIAGGSPVQMTGGAGADTFVPMEVNGKITITDFEP 213
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-S 382
+ D + + +V +L F + S++ ++Q D
Sbjct: 214 GVDRLDLSFLGM--IRNVGQLGFRPESYGIRIFYGNSVIWVMTRDNTMLQASAFDNSLFP 271
Query: 383 MKHFY 387
+ H+
Sbjct: 272 IAHYA 276
>gi|163792384|ref|ZP_02186361.1| Hemolysin-type calcium-binding toxin [alpha proteobacterium BAL199]
gi|159182089|gb|EDP66598.1| Hemolysin-type calcium-binding toxin [alpha proteobacterium BAL199]
Length = 832
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 2/169 (1%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ GN + S ++ ++ + ++ GG + +I G
Sbjct: 217 STNDGNVAAGETLTVNASTNSSSVTWNGAAETDGVFSMTGGSGADSLVGGAGADTISGNS 276
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N T+ + + G +GND + G + + +GND+ G SG DT A + +
Sbjct: 277 GNDTLRGEAGNDRLFGGTGNDQLSGGAGTDTLSGGAGNDLMSGGSGFDTLVGGAGNDTFT 336
Query: 318 IYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ N + D ++ V+ S + + T
Sbjct: 337 GSASDHNGDTISDFATGDSIVVTGVDLSSLNGTTASSTLATGSNGITLT 385
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 11/142 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T++ GG D D+ + + N + ++ G + N +
Sbjct: 631 GGADTVNGGTGADTVW--GGTDA-DVAYGNQDDDVVYGNQGND-TLFGGQGNDVVFGGQD 686
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-------IYR 320
+ V G+ G+DVV GN ++ + +GND+ G +G DT + ++
Sbjct: 687 ADIVYGNLGDDVVYGNLGDDTLYGGAGNDLLYGGAGNDTLIGGVGNDTFQGGLGNDLFST 746
Query: 321 FENAIIVYDANEHKQDFLSDVE 342
++ + D +SD +
Sbjct: 747 GTGNDVIIVSASSGADTVSDFD 768
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 52/181 (28%), Gaps = 42/181 (23%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN----------YIDLNT 247
+ N + + T+ +GG D L++ G +++
Sbjct: 152 NGITGTVNDDNFDALAGEFNANDTLNGAGGTDTLNIAGAQGTLTLTATTITNIEIVNITA 211
Query: 248 E----------------------------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+W+ + ++ + +S+VG +G D
Sbjct: 212 GVQDISTNDGNVAAGETLTVNASTNSSSVTWNGAAETDGVFSMTGGSGADSLVGGAGADT 271
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ GNS N+ +GND G +G D A + A + D L
Sbjct: 272 ISGNSGNDTLRGEAGNDRLFGGTGNDQLSGGAGTDTLS----GGAGNDLMSGGSGFDTLV 327
Query: 340 D 340
Sbjct: 328 G 328
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 9/153 (5%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D ++ I G I + +++ + +++ + +++ G GND + +
Sbjct: 569 DNIEFVSIIGSARVIGGSGNNYAVGDDSAQFISLGEGD--DTLYGGDGNDTIGSADGADQ 626
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRF 346
F G D +G +G DT + + + N D L + + F
Sbjct: 627 LFGEGGADTVNGGTGADTVWGGTDAD----VAYGNQDDDVVYGNQGNDTLFGGQGNDVVF 682
Query: 347 ADQCIDSVNVKQRSILEYTASYED-LIQVIGQD 378
Q D V + Y +D L G D
Sbjct: 683 GGQDADIVYGNLGDDVVYGNLGDDTLYGGAGND 715
>gi|239833735|ref|ZP_04682063.1| hemolysin-type calcium-binding region [Ochrobactrum intermedium LMG
3301]
gi|239821798|gb|EEQ93367.1| hemolysin-type calcium-binding region [Ochrobactrum intermedium LMG
3301]
Length = 231
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 62/179 (34%), Gaps = 8/179 (4%)
Query: 215 DSPFIQTIYDSGGDD-----LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T++ G+D + TL G N I E + G + + +
Sbjct: 45 GGDGNDTVFGGNGNDILFGGTGNDTLFGENGNDILFGNEGNDVLSGGNGSDVLYGGNGDD 104
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +G+D++ G + N++ + +GND+ DG +G D S + ++ D
Sbjct: 105 ILQGGNGSDLLYGGAHNDILYGGNGNDILDGGAGNDVLIGGNGSDTFLFNGGGGNDVILD 164
Query: 330 ANEHKQDF--LSDVERLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQDVFESMKH 385
N + + L + + V Q D + ++ + + H
Sbjct: 165 FNPGEDILQIQKGINGLDISSADDLADRVTQVGGNVVVDLGNGDTVTLVNTNADDVQAH 223
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N T+ + + G +GND + G + N++ F + GNDV G +G D +
Sbjct: 43 VFGGDGNDTVFGGNGNDILFGGTGNDTLFGENGNDILFGNEGNDVLSGGNGSDVLYGGNG 102
Query: 313 SYL 315
+
Sbjct: 103 DDI 105
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I H + V G GND V G + N++ F +GND G +G D F
Sbjct: 25 LFGSRFDDFIRAHGGDDLVFGGDGNDTVFGGNGNDILFGGTGNDTLFGENGNDILFGNEG 84
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + + ++Y N D L + L IL+ A +
Sbjct: 85 NDV--LSGGNGSDVLYGGN--GDDILQGGNGSDLLYGGAHNDILYGGNGNDILDGGAGND 140
Query: 370 DLIQVIGQD 378
LI G D
Sbjct: 141 VLIGGNGSD 149
Score = 38.2 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 17/123 (13%)
Query: 279 VVIGNSANNVFFES---------SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G + ++V F S G+D+ G G DT F + + + + +
Sbjct: 15 TLEGGAYDDVLFGSRFDDFIRAHGGDDLVFGGDGNDTVFGGNGNDILFGGTGNDTLFGEN 74
Query: 330 AN-----EHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D LS + L + +L A + L G D+ +
Sbjct: 75 GNDILFGNEGNDVLSGGNGSDVLYGGNGDDILQGGNGSDLLYGGAHNDILYGGNGNDILD 134
Query: 382 SMK 384
Sbjct: 135 GGA 137
>gi|62897631|dbj|BAD96755.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 469
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 207 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 238
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 239 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 266
>gi|332704788|ref|ZP_08424876.1| glycosyl transferase family 2 [Desulfovibrio africanus str. Walvis
Bay]
gi|332554937|gb|EGJ51981.1| glycosyl transferase family 2 [Desulfovibrio africanus str. Walvis
Bay]
Length = 1237
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 12/96 (12%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ YL S D+ + H++T G EGRNP F Y+ + +L+
Sbjct: 21 FDARYYLLSNQDV----AASGMNPLEHFLTRGGFEGRNPSRHFDVFWYVEQNPELLQQKI 76
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ H+ G +EGR + +
Sbjct: 77 NP-------LIHYLVQGRQEGRLPMPPTTRDTETGP 105
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 10/95 (10%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLY 404
AD V Y S +D+ ++HF G EGR+ + FD + Y
Sbjct: 9 ADLHRLLVETGLFDARYYLLSNQDVAA----SGMNPLEHFLTRGGFEGRNPSRHFDVFWY 64
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ +L + HY+ G +EGR P
Sbjct: 65 VEQNPELLQ----QKINPLIHYLVQGRQEGRLPMP 95
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
F A Y+ S++D+ + + +HF G EGR + FD + Y+
Sbjct: 17 ETGLFDARYYLLSNQDVAASGMNP-------LEHFLTRGGFEGRNPSRHFDVFWYVEQNP 69
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+L + HY+ G +EGR P +
Sbjct: 70 ELLQQ----KINPLIHYLVQGRQEGRLPMPPTTRDT 101
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 13/93 (13%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
F A Y+ S++D+ + + +HF G EGR+ + F+ Y+
Sbjct: 17 ETGLFDARYYLLSNQDVAASGMNP-------LEHFLTRGGFEGRNPSRHFDVFWYVEQNP 69
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
+L + HY+ G +EGR
Sbjct: 70 ELL----QQKINPLIHYLVQGRQEGRLPMPPTT 98
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ YL S D+ H++T G EGRNP F Y+ + +L+
Sbjct: 21 FDARYYLLSNQDVAASG----MNPLEHFLTRGGFEGRNPSRHFDVFWYVEQNPELLQQKI 76
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
+ H+ G +EGR
Sbjct: 77 NP-------LIHYLVQGRQEGR 91
>gi|321462023|gb|EFX73050.1| hypothetical protein DAPPUDRAFT_325672 [Daphnia pulex]
Length = 533
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 70/195 (35%), Gaps = 50/195 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE------ 71
+++ W+ + Y T L + + ++ +E+A+ A W +V LTF
Sbjct: 107 IKEDRWAKDDLTYGIRKYT---LDLEKSVVD---REIAK-AFRLWEEVTPLTFTFVETGN 159
Query: 72 -------ETSIHSDIKF--ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
E+ HSD + G + + + +FD+A+ W G L
Sbjct: 160 VDIEISFESGAHSDSRNHDAFDGPGKTLAHAFFPQSGGDAHFDEAETWTISSD-GANLFQ 218
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GHALGL H S T+VM F +
Sbjct: 219 VATHEFGHALGLEHSES-------------------KTAVMYSF--------YDYRPDFK 251
Query: 183 PMVSDIVAVQKIYGA 197
DI +Q++YGA
Sbjct: 252 LETDDINRIQQLYGA 266
>gi|304394329|ref|ZP_07376252.1| heme peroxidase [Ahrensia sp. R2A130]
gi|303293769|gb|EFL88146.1| heme peroxidase [Ahrensia sp. R2A130]
Length = 1955
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 20/156 (12%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSS-------------IGGYEKNMTI---AQHTVIESV 271
+ G IDL+ + S+ + G + N I A +++
Sbjct: 928 NSTFATGTPGIQGLTIDLDDSALSTGHARGDSYLDIEELRGTQHNDIIFGSADPAAPDAI 987
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI--YRFENAIIVYD 329
G +GND + G ++V GND +G +G+D + Y I F ++
Sbjct: 988 FGGAGNDTIDGRDGDDVISGQEGNDNINGGAGVDQVIFAGNRADYTIAPGTFGGLVVTEI 1047
Query: 330 ANEHK--QDFLSDVERLRFADQCIDSVNVKQRSILE 363
A D L+ VE L F DQ ++ + ++
Sbjct: 1048 AAPVGTNTDTLNGVEFLVFDDQIVNVSSGATAPLIF 1083
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 70/188 (37%), Gaps = 14/188 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDL-TLIGGVKNYIDLNTESWSSIGGYE 257
G GN+ Y I+ +T G G D +++ + + ++ +L + G
Sbjct: 1688 GGAGNDTYVID--DIGDVIDETAGSGGSGIDTVEIESTYTLLSDFENLTLTGSGNFDGN- 1744
Query: 258 KNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+++++ G+SGN+ ++G+ + +GND+ G +G+DT LY
Sbjct: 1745 -------GNALDNMITGNSGNNFLLGHDGADTLIGGAGNDILGGGAGIDTMIGGLGDDLY 1797
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + +IV A E QD + AD + + A + G
Sbjct: 1798 SVTESAD-VIVELAGEGTQDTVYAAVDYTLADNIENLILQNAGLTGTGNAMSNSMYGSAG 1856
Query: 377 QDVFESMK 384
D
Sbjct: 1857 DDRINGAG 1864
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 11/186 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIG 254
G G++IY V I+ + G D + D TL V+ I + + + +
Sbjct: 1588 SGGTGDDIY--SVDNVGDLVIEAV--GEGIDTVYATSDFTLGANVETLIGVGSIA-QELH 1642
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA-PS 313
G + I + G G+D ++G S + +G D G +G DT+
Sbjct: 1643 GNAGSNAIYGGAFNSMLFGEGGDDALLGGSGDERLDGGTGADYMAGGAGNDTYVIDDIGD 1702
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLI 372
+ + + I E LSD E L D +++ + L+
Sbjct: 1703 VIDETAGSGGSGIDTVEIESTYTLLSDFENLTLTGSGNFDGNGNALDNMITGNSGNNFLL 1762
Query: 373 QVIGQD 378
G D
Sbjct: 1763 GHDGAD 1768
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 18/156 (11%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNYI 243
+A +YG G+++ + I GDD D + GG N +
Sbjct: 781 LADDHLYGGD----GDDV------IFGDDGVDFIRGDDGDDEIHGGTEDDAITGGKGNDV 830
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G + + I T + ++G G+D++ G++ N+ +G+D+ G G
Sbjct: 831 IFGDAGFDALLGGDGDDVIHGGTQDDEILGGEGHDLLFGDNGNDALDGEAGDDILIGGRG 890
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
D A + D D S
Sbjct: 891 DDALVGGAGDD---LLIGGQGADAMDGGVGGYDIAS 923
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 5/161 (3%)
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ T++ GGDD + D L GG + + + I G + + I T
Sbjct: 760 RAGNGNDTVWGDGGDDEIHGGLADDHLYGGDGDDVIFGDDGVDFIRGDDGDDEIHGGTED 819
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GNDV+ G++ + G+DV G + D L +A+
Sbjct: 820 DAITGGKGNDVIFGDAGFDALLGGDGDDVIHGGTQDDEILGGEGHDLLFGDNGNDALDGE 879
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ D + A + ++ Y+
Sbjct: 880 AGDDILIGGRGDDALVGGAGDDLLIGGQGADAMDGGVGGYD 920
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 1/141 (0%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
D+ E IGG I ++V G G+D + G A++ + G+DV G G
Sbjct: 741 DVTAEDHEVIGGTNDANIIRAGNGNDTVWGDGGDDEIHGGLADDHLYGGDGDDVIFGDDG 800
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+D ++AI N+ + + L D Q +
Sbjct: 801 VDFIRGDDGDDEIHGGTEDDAITGGKGNDVIFGD-AGFDALLGGDGDDVIHGGTQDDEIL 859
Query: 364 YTASYEDLIQVIGQDVFESMK 384
++ L G D +
Sbjct: 860 GGEGHDLLFGDNGNDALDGEA 880
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++++GS+ D ++ +++ GND G G D+ +Y + + +I
Sbjct: 1548 VDNLIGSAYQDHIVALGSDDTLIGGGGNDNLIGGEGADSMSGGTGDDIYSVDNVGDLVI- 1606
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+A D + + V
Sbjct: 1607 -EAVGEGIDTVYATSDFTLGANVETLIGVGS 1636
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I T+ GDDL ++ ++L E + T+A + IE
Sbjct: 1776 NDILGGGAGIDTMIGGLGDDLY--SVTESADVIVELAGEGTQDTVYAAVDYTLADN--IE 1831
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ + GN+ +N + S+G+D +G+ G D + Y ++ +
Sbjct: 1832 NLILQNAGLTGTGNAMSNSMYGSAGDDRINGAGGADYLVGLGGNDTYIFVAGDSGV 1887
>gi|149203810|ref|ZP_01880779.1| Hemolysin-type calcium-binding protein [Roseovarius sp. TM1035]
gi|149142927|gb|EDM30969.1| Hemolysin-type calcium-binding protein [Roseovarius sp. TM1035]
Length = 834
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + + + ID + + IGG I +
Sbjct: 636 NDVLAGGAGNDTLSGGDGNDSMSGSF---GNDLIDAGSGAD-DIGGGTGRDAINAGAGND 691
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V G G+D + G + N+ +D+ DG +G DT A + + + +
Sbjct: 692 RVGGGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTINGGAGNDVMTGGADADQFVFSA 751
Query: 330 ANEHKQDFLSDVER 343
+ + D ++D E
Sbjct: 752 FFDGEADVITDFED 765
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 9/143 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTL----IGGVKNYIDLNTESWSS-IGGYEKNMTIAQ 264
++ S G+DL+D IGG +N + + +GG E + TI+
Sbjct: 645 NDTLSGGDGNDSMSGSFGNDLIDAGSGADDIGGGTGRDAINAGAGNDRVGGGEGDDTISG 704
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFE 322
+ + G +D++ G + N+ +GNDV G + D F + A I FE
Sbjct: 705 GNGNDFLAGGGRDDIIDGGTGNDTINGGAGNDVMTGGADADQFVFSAFFDGEADVITDFE 764
Query: 323 NAIIVYDANEHKQDFLSDVERLR 345
+ + + D VE +
Sbjct: 765 DGLDSFFIRRFDPDT--GVENIS 785
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 60/197 (30%), Gaps = 14/197 (7%)
Query: 203 GNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ I + TI G+D + + + + L +IGG N
Sbjct: 555 GDTITGGDTDDTLAGDAGNDTIDGGAGNDRISAS----DGDDVVLGGSGNDNIGGGVGND 610
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + G+D V G N+V +GND G G D+ + L
Sbjct: 611 TIDGGDGDDVMGAGFGDDSVSGGLGNDVLAGGAGNDTLSGGDGNDSMSGSFGNDLIDAGS 670
Query: 321 FENAIIVYDANE-----HKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ I + D + E + + + I++ + +
Sbjct: 671 GADDIGGGTGRDAINAGAGNDRVGGGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTIN 730
Query: 373 QVIGQDVFESMKHFYEF 389
G DV +F
Sbjct: 731 GGAGNDVMTGGADADQF 747
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 40/143 (27%), Gaps = 8/143 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G+ + + + GG+D L + I + G
Sbjct: 337 EAHGGDGEDQFQGLNNGANLFF-----GGNDNDLLIGGFDSADTIHGGAGDDNIGAGSFF 391
Query: 259 NMTIA---QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N ++ V G +GND + G + + G+D G D A
Sbjct: 392 NFSLGANIYSDVANLFHGDAGNDTLFGGNGADTLHGGDGDDYILPLLGDDVVHGGAGLDT 451
Query: 316 YKIYRFENAIIVYDANEHKQDFL 338
Y + D + D L
Sbjct: 452 YSMSVGNGGFEGSDVSRSFGDKL 474
>gi|159028656|emb|CAO88127.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 765
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 8/175 (4%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIG 254
A ++ + ++ SG G D + + + ID I
Sbjct: 546 ANSANIAMTVGGGPDPNDGPSGGDSVIGSGTIGADSITGSTGDDDLSGIDGTDT----IN 601
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N TI T + + G +GND +IG ++ + SGND +G +G DT +
Sbjct: 602 GGDGNDTINGGTGADIIRGGTGNDNIIGLGGFDLIYGGSGNDTINGGNGNDTIVGGFGND 661
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + +QD ++ D S S T +Y
Sbjct: 662 --SLIGGGGDTFQFLSIYDQQDVITGFNDTIVFDITGASAFTALGSGALGTTTYT 714
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 17/157 (10%)
Query: 197 APKGSLGNNIYKIEVQQKD-----------SPFIQTIYDSGGDDLLDLT-LIGGVKNYID 244
+ S+ + Y D + + T+ + G + ++ +GG + D
Sbjct: 504 SNFTSVNGDTYTATFTATDFQSPTGTVAVSNDYFDTLGNQGVANSANIAMTVGGGPDPND 563
Query: 245 LNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ S IG G +I T + + G G D + G N+ +G D+ G +G
Sbjct: 564 GPSGGDSVIGSGTIGADSITGSTGDDDLSGIDGTDTINGGDGNDTINGGTGADIIRGGTG 623
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
D L + + + D +
Sbjct: 624 NDNIIGLGGFDL----IYGGSGNDTINGGNGNDTIVG 656
>gi|327269126|ref|XP_003219346.1| PREDICTED: matrilysin-like [Anolis carolinensis]
Length = 423
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 63/187 (33%), Gaps = 48/187 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
W + Y+ T+ + + + A+ WS V L F +T+ +DI
Sbjct: 108 WKKNSLTYRIINTTSDLPQDKV-------ESILAEAIKVWSDVTPLKFTKTTDTADIDIY 160
Query: 83 S------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHEIG 129
N + + F + +FD + W +GT L A HE G
Sbjct: 161 FARDEHGDNYPFDGVGGTLAHAFAPGKGLAGDAHFDDDEYWTED-DEGTSLFIVAAHEFG 219
Query: 130 HALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
H+LGL H S+ YP Y SY ++ + D+
Sbjct: 220 HSLGLGHSKSHGALMYPTY----------------SYKKQKNYKLPT----------DDV 253
Query: 189 VAVQKIY 195
+QK+Y
Sbjct: 254 KGIQKLY 260
>gi|327269120|ref|XP_003219343.1| PREDICTED: matrix metalloproteinase-27-like [Anolis carolinensis]
Length = 437
Score = 71.3 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 63/210 (30%), Gaps = 54/210 (25%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
+ ++L W + Y+ T D+ + A WS V LT
Sbjct: 65 VPDVGQYVLASPGWKKNKLTYRIVNYTPDMRQADVA--TAIQK-----AFEVWSAVTPLT 117
Query: 70 FEET-SIHSDIKFISSNN----------------GYVCTPRYDSRYFMEINFDKADVWRY 112
F +DI + G+ P R I+FD+ + W
Sbjct: 118 FRRVHKERADITIEFATRVHGRCPRHFDGPLGVLGHAFPPNNPFRG--NIHFDEDESWTA 175
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ + L A HEIGHALGL H YP Y P+D
Sbjct: 176 RLAEFN-LWLVAAHEIGHALGLAHSDDPRALMYPNYKP----------------IDPEDF 218
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++ DI +Q IYG
Sbjct: 219 LLSQ----------DDIEGIQAIYGPSLNP 238
>gi|296231221|ref|XP_002761064.1| PREDICTED: matrix metalloproteinase-15 [Callithrix jacchus]
Length = 666
Score = 71.3 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 65/210 (30%), Gaps = 56/210 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + ++ E R A W + L F+E
Sbjct: 132 YALTGKKWNNHHLTFSIQNYTQKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 184
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D + G++ + + +FD + W +
Sbjct: 185 EDIRLRRQKEADIMVLFASGFHGDSSPFDGSGGFLAHAYFPGPGLGGDTHFDADEPWTFS 244
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + Y + D+
Sbjct: 245 NTDLNGNNLFLVAVHELGHALGLEHSNNPSAIMAPYYQ----------------WKDVDN 288
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
D+ +Q +YG P G
Sbjct: 289 FQLPE---------DDLQGIQHLYGTPDGR 309
>gi|60207592|gb|AAX14804.1| matrix metalloproteinase 3/10a [Notophthalmus viridescens]
Length = 484
Score = 71.3 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 65/209 (31%), Gaps = 49/209 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP A++ W + Y+ T D+ R A W
Sbjct: 88 KPRCGVADAAEYSHFGGRPTWRTTSLTYRILNYTPDMAEADV-------DTAIRRAFKVW 140
Query: 63 SKVVDLTFE---ETSIHSDIKFISSNNG----YVCTPRYDSRYFMEIN-------FDKAD 108
S V LTF E + I F + +G + + F N FD+ +
Sbjct: 141 SDVTPLTFSRIYEGTADIQISFGAGVHGDFYPFDGPHGTLAHAFAPGNSIGGDAHFDEDE 200
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W G G L A HE GH+LGL H G + + SY P
Sbjct: 201 TWTAGSA-GYNLFLVAAHEFGHSLGLYHSGDRSA---------------LMYPTYSYTDP 244
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGA 197
A F D+ +Q +YGA
Sbjct: 245 ------ARFRLPQ----DDVDGIQALYGA 263
>gi|77465538|ref|YP_355041.1| hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
2.4.1]
gi|77389956|gb|ABA81140.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
2.4.1]
Length = 556
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 2/166 (1%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ TL+GG N + E N ++ + + G G+D+V+G N+
Sbjct: 29 FNDTLMGGAGNDSLYGNGDDDRLYVNEGNDSLYGEEGNDWLHGGQGDDLVVGGDGNDTLA 88
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND G +G DT Y + + + + D L+ +E L ++
Sbjct: 89 GGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEGQFVNAQEGNDPLTSIENLTGSNHD 148
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
+ + ++L A + L+ G D + + ++ + G
Sbjct: 149 DTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATG 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 39/91 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N ++ + +++VG +GND + G N++ +G+D +G G D
Sbjct: 396 IFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGSDTLNGGVGDDVLVGGQG 455
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
L + + + D ++D E+
Sbjct: 456 FDLLTGGTGADTFVFGSLDSADADRITDFEQ 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 12/178 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + E N + T IE
Sbjct: 84 NDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEGQFVNAQEGNDPL---TSIE 140
Query: 270 SVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ GS+ +D +IG+ +NV +GND G +G D Y A + +
Sbjct: 141 NLTGSNHDDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNL 200
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D LS +E + + +++ + G D
Sbjct: 201 ARDGQAQIIGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFGGDGADLATGGAGND 258
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 7/128 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ G+D+ D G IG + + + IE V+GS
Sbjct: 171 GGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQAQIIGADQGTDVL---SSIEGVIGS 227
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ ND++ G++ N+ F G D+ G +G DT A S + N +
Sbjct: 228 AFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAGSDSL----YGNLGDDLLFGDVG 283
Query: 335 QDFLSDVE 342
D++ +
Sbjct: 284 NDWIHGGQ 291
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 40/190 (21%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S I+ G DL G N TI
Sbjct: 229 FNDILSGSAVANLIFGGDGADL----------------------ATGGAGNDTILGGAGS 266
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------------------YY 310
+S+ G+ G+D++ G+ N+ GND G G DT +
Sbjct: 267 DSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDTVEFQ 326
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + E D L +E + + + ++++ +A +
Sbjct: 327 TATAGVTVDLSLQGQAQRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLIDGSAGNDT 386
Query: 371 LIQVIGQDVF 380
+ G+D+
Sbjct: 387 AMGQAGEDLI 396
>gi|119490760|ref|ZP_01623092.1| lipoprotein receptor-related protein [Lyngbya sp. PCC 8106]
gi|119453744|gb|EAW34902.1| lipoprotein receptor-related protein [Lyngbya sp. PCC 8106]
Length = 3477
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 24/186 (12%)
Query: 204 NNIYKIEVQQKDSPFIQ--TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ IY + + Q T++ + G DL++ G N I + G + N T
Sbjct: 3288 DEIYGGKNDDQVRGGAQDDTMFGNLGADLIE----GNEDNDI---------LFGNQDNDT 3334
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ ++ + + G GND++ GNS ++V F +G+D DG G D + L
Sbjct: 3335 ISGNSEQDFIYGGQGNDLLDGNSGDDVLFGDNGDDTLDGGEGDDQLTGGNGNDLLVGAIG 3394
Query: 322 ENAIIVYDANE-------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ D N+ + D ++D + D + + + + +I+V
Sbjct: 3395 ADTLVGGDGNDRFVLVVGYGVDLITDF--VDGEDVIVLDGGLTFEQLTLTSIENSTVIEV 3452
Query: 375 IGQDVF 380
G
Sbjct: 3453 NGTPQA 3458
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 55/185 (29%), Gaps = 15/185 (8%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTE----SWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ G D+ D + + + DL S SS + IA T V G G D
Sbjct: 3149 NDGVFDIFDPSNLIPTIAFPDLQPPNLNISTSSEPTDNVDAIIASTTETGIVFGLQGGDY 3208
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G N+ + ND D G DT + + D LS
Sbjct: 3209 IQGTENNDEINGNEDNDFIDAKDGNDTILGGKNDDQIRSGSGNDWT----FGNLGNDILS 3264
Query: 340 DVERLRFADQCIDSVNVKQRSILE--YTASYEDLIQVIGQDVF---ESMKHFYEFGLSEG 394
+ + D + + Y +D ++ QD E +E
Sbjct: 3265 GDRDHDWINGNEDEDLIDGAGGEDEIYGGKNDDQVRGGAQDDTMFGNLGADLIEG--NED 3322
Query: 395 RDITF 399
DI F
Sbjct: 3323 NDILF 3327
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 51/176 (28%), Gaps = 25/176 (14%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D +D + + I + I G E N I + + + GND ++G ++
Sbjct: 3184 TDNVDAIIASTTETGIVFGLQGGDYIQGTENNDEINGNEDNDFIDAKDGNDTILGGKNDD 3243
Query: 288 VFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEH------- 333
SGND G+ G D + I +Y
Sbjct: 3244 QIRSGSGNDWTFGNLGNDILSGDRDHDWINGNEDEDLIDGAGGEDEIYGGKNDDQVRGGA 3303
Query: 334 ---------KQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + E + F +Q D+++ Y DL+ D
Sbjct: 3304 QDDTMFGNLGADLIEGNEDNDILFGNQDNDTISGNSEQDFIYGGQGNDLLDGNSGD 3359
>gi|332708421|ref|ZP_08428398.1| hemolysin-type calcium-binding region protein [Lyngbya majuscula
3L]
gi|332352824|gb|EGJ32387.1| hemolysin-type calcium-binding region protein [Lyngbya majuscula
3L]
Length = 371
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 41/159 (25%), Gaps = 13/159 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI GG+D L + GG I G + T +
Sbjct: 185 NDHISGGKGNDTIVGRGGNDTL--SGDGGKDV-----------IKGGAGKDVLDGGTGRD 231
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + GND G G D S + +
Sbjct: 232 TINGGRGNDTINGGGGKDRLVGGRGNDHITGGGGDDRINGGRGSDTLVGGAGHDQFLFTK 291
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + +E I ++
Sbjct: 292 GSSFRHGDVDVIEDFEIGADLIKLKGFGAIDPQQWFHRA 330
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 19/145 (13%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G +N I+ +++VG GND + G+ +V +G DV DG +G DT +
Sbjct: 181 GTRRNDHISGGKGNDTIVGRGGNDTLSGDGGKDVIKGGAGKDVLDGGTGRDTINGGRGND 240
Query: 315 LYKIYRFENAIIVYDANEH--------------KQDFLSDV---ERLRFADQCIDSVNVK 357
++ ++ N+H D L ++ F S
Sbjct: 241 TINGGGGKDRLVGGRGNDHITGGGGDDRINGGRGSDTLVGGAGHDQFLF--TKGSSFRHG 298
Query: 358 QRSILEYTASYEDLIQVIGQDVFES 382
++E DLI++ G +
Sbjct: 299 DVDVIEDFEIGADLIKLKGFGAIDP 323
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 35/118 (29%), Gaps = 8/118 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G+ ND + G N+ GND G G D A + + I
Sbjct: 177 DKLIGTRRNDHISGGKGNDTIVGRGGNDTLSGDGGKDVIKGGAGKDVLDGGTGRDTINGG 236
Query: 329 DANE-----HKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N+ +D L + + + L A ++ + G
Sbjct: 237 RGNDTINGGGGKDRLVGGRGNDHITGGGGDDRINGGRGSDTLVGGAGHDQFLFTKGSS 294
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 21/125 (16%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT-----VIESVV-------------GSS 275
T + +ID ++ S + +TI T I+ +V G+
Sbjct: 115 TQDNDPRQFIDTDSPIDSDVDPNTGRVTIGPITRFLPEGIDQLVWDAGLVPVKPGSTGTP 174
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D +IG N+ GND G G DT + + V D +
Sbjct: 175 GDDKLIGTRRNDHISGGKGNDTIVGRGGNDTLSGDGGKD---VIKGGAGKDVLDGGTGRD 231
Query: 336 DFLSD 340
Sbjct: 232 TINGG 236
>gi|114329053|ref|YP_746210.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114317227|gb|ABI63287.1| putative glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 122
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
+ FD Y Y D+ G D HY T G +EGR P+ AF Y ++ D+ +A
Sbjct: 47 LIFDPDFYRSRYLDVAEA-GID---PVDHYFTVGWREGRQPNAAFDPEAYQTANPDVRDA 102
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ H+ G EGR
Sbjct: 103 QINP-------FAHYLLRGYREGR 119
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL 411
+NV Y + Y D+ + + + H++ G EGR FD Y + D+
Sbjct: 44 LNVLIFDPDFYRSRYLDVAEA----GIDPVDHYFTVGWREGRQPNAAFDPEAYQTANPDV 99
Query: 412 RNVFGSDRGAAARHYITHGVKEGR 435
R+ + HY+ G +EGR
Sbjct: 100 RDA----QINPFAHYLLRGYREGR 119
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y + + D+ A D DH+ G+ EGR F+P+ Y T+ D+ +
Sbjct: 49 FDPDFYRSRYLDVAEAGIDP-------VDHYFTVGWREGRQPNAAFDPEAYQTANPDVRD 101
Query: 582 VFGSDRSAAAQHYITHGMKEGRAL 605
+ HY+ G +EGR L
Sbjct: 102 A----QINPFAHYLLRGYREGRPL 121
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 538
+ FD Y Y D+ G D HY T G +EGR P+ AF Y ++ D+ +
Sbjct: 46 VLIFDPDFYRSRYLDVAEA-GID---PVDHYFTVGWREGRQPNAAFDPEAYQTANPDVRD 101
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT 566
A + H+ GY EGR +
Sbjct: 102 AQINP-------FAHYLLRGYREGRPLR 122
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 13/82 (15%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y + + D+ A D DH+ G EGR FD Y + D+R+
Sbjct: 49 FDPDFYRSRYLDVAEAGIDP-------VDHYFTVGWREGRQPNAAFDPEAYQTANPDVRD 101
Query: 498 VFGSDRGAAARHYITHGVKEGR 519
+ HY+ G +EGR
Sbjct: 102 A----QINPFAHYLLRGYREGR 119
>gi|85706670|ref|ZP_01037762.1| glycosyltransferase [Roseovarius sp. 217]
gi|85668728|gb|EAQ23597.1| glycosyltransferase [Roseovarius sp. 217]
Length = 638
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFG 416
S Y D + + + HF G GRD F S YL + D+
Sbjct: 15 SSAFFDARWYSDTYPDVARTPLDPASHFARIGAFLGRDPGPQFSSRYYLAANPDVAAA-- 72
Query: 417 SDRGAAARHYITHGVKEGRNPDA 439
HY++ G KEGR P+
Sbjct: 73 --GLNPLLHYLSTGHKEGRTPNP 93
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y +Y D+ A H+ G GR+P F + Y+A++ D+ A
Sbjct: 19 FDARWYSDTYPDVART----PLDPASHFARIGAFLGRDPGPQFSSRYYLAANPDVAAAGL 74
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ H+ + G +EGR
Sbjct: 75 NP-------LLHYLSTGHKEGRTPNP 93
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R+ F A Y ++ D+ D HF+ G GR F S YL +
Sbjct: 14 RSSAFFDARWYSDTYPDVARTPLDPA-------SHFARIGAFLGRDPGPQFSSRYYLAAN 66
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
D+ HY++ G KEGR P+
Sbjct: 67 PDVAAAG----LNPLLHYLSTGHKEGRTPNP 93
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R+ F A Y ++ D+ D HF+ G GR F+ YL +
Sbjct: 14 RSSAFFDARWYSDTYPDVARTPLDP-------ASHFARIGAFLGRDPGPQFSSRYYLAAN 66
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
D+ HY++ G KEGR
Sbjct: 67 PDVAAA----GLNPLLHYLSTGHKEGRTPNP 93
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD+ Y +Y D+ A H+ G GR+P F + Y+A++ D+
Sbjct: 16 SAFFDARWYSDTYPDVART----PLDPASHFARIGAFLGRDPGPQFSSRYYLAANPDVAA 71
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT 566
A + H+ + G++EGR+
Sbjct: 72 AGLNP-------LLHYLSTGHKEGRTPN 92
>gi|296216043|ref|XP_002807312.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-27-like
[Callithrix jacchus]
Length = 628
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 61/189 (32%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T E + L WSKV LTF + S +DI
Sbjct: 106 WRKYNLTYRIINYTPDMAR-------AAVDEAIQEGLEVWSKVTPLTFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWT-TDGTGFSLFLVATHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D Y + D
Sbjct: 218 FGHALGLSHSSD-------------------QTALM---FPNYVSLDPRK-YPLS--QDD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 ISGIQSIYG 261
>gi|326671416|ref|XP_683002.5| PREDICTED: matrix metalloproteinase-18-like [Danio rerio]
Length = 770
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 20/138 (14%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNA-----QEVARWALGEWSKVVDLTFEETS-IHS 77
S+ K T L++ I++ + + R A W++ L F +
Sbjct: 349 SDVERFGKTMRWTNKTLTYKISKFSSKMSSARVKTAFRQAWQLWAQAAPLKFRRKRRSDA 408
Query: 78 DIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNA 124
DI +N + +D + +++FD + W G G L A
Sbjct: 409 DIVISFNNKDHNDGSPFDGEGGILAHAFSPGPGIGGDVHFDDEETWTTN-GSGYNLLPVA 467
Query: 125 LHEIGHALGLMHPGSYNG 142
+HE GHALGL H
Sbjct: 468 VHEFGHALGLSHSSDPGA 485
>gi|3550075|gb|AAC34604.1| matrix metalloproteinase-13 [Gallus gallus]
Length = 378
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 59/184 (32%), Gaps = 40/184 (21%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI--KFISS 84
+++ LT +S+ + + A WS V L F S +DI F +
Sbjct: 18 LKWSNTNLTYRIMSYTSDLRRAEVERAFKRAFKVWSDVTPLNFTRIRSGTADIMISFGTK 77
Query: 85 NNGYVCTPRYDSR-----------YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+G S Y + +FD + W +G L A HE GH+LG
Sbjct: 78 EHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDETWSDD-SRGYNLFLVAAHEFGHSLG 136
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H +M P + S D+ +Q+
Sbjct: 137 LEHSRDPGA-------------------LM---FPIYTYTGKSGFVLP---DDDVQGIQE 171
Query: 194 IYGA 197
+YGA
Sbjct: 172 LYGA 175
>gi|302875268|ref|YP_003843901.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|307688118|ref|ZP_07630564.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|302578125|gb|ADL52137.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
Length = 304
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-----NPDAFKALEYIASHEDLI 453
F YL Y D+ +HY+++G KEGR P F Y+ + D++
Sbjct: 168 FSRTWYLAQYPDVLK----SGLDPYQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNTDVV 223
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+A + G DH+ FG EGR +
Sbjct: 224 DAINRGEYV--SGLDHYYEFGWREGRKWNY 251
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSD 502
Y AS ++ + F+ + EE + F YL Y D+ G D
Sbjct: 128 YDASRKNCPSPFSSNNWARWTEFKNKIVNEVEEDEMKIRIFSRTWYLAQYPDVLKS-GLD 186
Query: 503 RGAAARHYITHGVKEGRNPDA-----FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+HY+++G KEGR P F Y+ + D+++A + +G DH+ F
Sbjct: 187 ---PYQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNTDVVDAINRGEYV--SGLDHYYEF 241
Query: 558 GYEEGRSITF 567
G+ EGR +
Sbjct: 242 GWREGRKWNY 251
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------FDSYLYLGSYDDLRNVF-G 416
Y A Y D+++ + +H+ +G EGR F YL D+ +
Sbjct: 173 YLAQYPDVLK----SGLDPYQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNTDVVDAINR 228
Query: 417 SDRGAAARHYITHGVKEGRN 436
+ + HY G +EGR
Sbjct: 229 GEYVSGLDHYYEFGWREGRK 248
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI------TFNPDLYLTSYD 577
F Y+A + D++ + D H+ ++G +EGR F YL
Sbjct: 168 FSRTWYLAQYPDVLKSGLDP-------YQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNT 220
Query: 578 DLWNVFG-SDRSAAAQHYITHGMKEGRALGI 607
D+ + + + HY G +EGR
Sbjct: 221 DVVDAINRGEYVSGLDHYYEFGWREGRKWNY 251
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 14/90 (15%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------TFDSYLYLGSYD 493
F Y+A + D++ + D H+ ++G +EGR F YL
Sbjct: 168 FSRTWYLAQYPDVLKSGLDP-------YQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNT 220
Query: 494 DLRNVFG-SDRGAAARHYITHGVKEGRNPD 522
D+ + + + HY G +EGR +
Sbjct: 221 DVVDAINRGEYVSGLDHYYEFGWREGRKWN 250
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS-GMQFKSVMNLSEKS 622
F+ YL Y D+ QHY+++G KEGR F L +
Sbjct: 168 FSRTWYLAQYPDVLK----SGLDPYQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNT 220
>gi|326914448|ref|XP_003203537.1| PREDICTED: stromelysin-1-like [Meleagris gallopavo]
Length = 493
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 73/220 (33%), Gaps = 42/220 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
+R R+K + +T L++ L + E A WS V L F S
Sbjct: 75 VRSYSTFPQNPRWKKEDVTYRILNYTPDMLQADVDEAIAKAFQLWSSVTPLRFNRLYSGD 134
Query: 77 SDI--KFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWR-YGIGKGTILSH 122
+DI F S +G + + +FD+ + W + G L
Sbjct: 135 ADIMISFASGFHGDFYSFDGPGGTLAHAYPPSRGIGGDAHFDEDENWTKFTTYSGYNLFL 194
Query: 123 NALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE+GH+LGL H + YP+Y D+
Sbjct: 195 VAAHELGHSLGLGHSNVFGALMYPIYMAK-----DTRNY--------------------- 228
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
DI +Q +YG K ++ Y ++SP T
Sbjct: 229 RLHQDDINGIQALYGKQKDVHMHDCYLKIGPPRESPAFPT 268
>gi|149203022|ref|ZP_01879993.1| Large exoprotein [Roseovarius sp. TM1035]
gi|149143568|gb|EDM31604.1| Large exoprotein [Roseovarius sp. TM1035]
Length = 5082
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 57/159 (35%), Gaps = 20/159 (12%)
Query: 199 KGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--I 253
G GN+ + G+D LD GG N D + S+ + I
Sbjct: 4861 NGGDGNDTMGGGFGDDLLSGGTGADVVAGGAGNDTLD----GGDGN--DSISGSFGNDVI 4914
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGL 304
G N I +++ G +GND + G ++ +GND V DG +G
Sbjct: 4915 NGGVGNDQIGGGAGRDTIDGGAGNDQIGGGEGDDDISGGAGNDFLAGGGRNDVIDGGTGN 4974
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
DT A + + + + + + D ++D E
Sbjct: 4975 DTINGGAGNDIMTGGADADIFVFSAFVDGELDVITDFED 5013
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 15/192 (7%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ ++ + T+ S GDDL+ D ++ GG+ + ++ G + N
Sbjct: 4771 TVNDVDEGPVSTNENDTLIGSDGDDLIGGLDGDDSISGGLGSDSLFGEAGNDTLSGGDGN 4830
Query: 260 MTIAQHTV---------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
T+A +S+ G GND + G N+ G+D+ G +G D
Sbjct: 4831 DTVAGGDGDDVVNGDAGNDSLGGGLGNDTLNGGDGNDTMGGGFGDDLLSGGTGADVVAGG 4890
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + ++I N+ + + + A + + +D
Sbjct: 4891 AGNDTLDGGDGNDSISGSFGNDVINGGVGNDQIGGGAGRDTIDGGAGNDQ-IGGGEGDDD 4949
Query: 371 LIQVIGQDVFES 382
+ G D
Sbjct: 4950 ISGGAGNDFLAG 4961
>gi|218437093|ref|YP_002375422.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
gi|218169821|gb|ACK68554.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
Length = 221
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + ++ ++ TI GG+D + N D+ +SS+ G
Sbjct: 16 TANADTMFGYDLVVPSPDGNDTINGLGGNDTI------YGGNGDDIIFGGFSSLAGSS-- 67
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G +GND ++G S ++ + +GND G SG+D F A + +++
Sbjct: 68 ---------DFLYGGNGNDSLVGGSGSDSLYGGNGNDTLTGGSGIDRMFGGAGADIFRFS 118
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ + +DF ++R+ + +++V + + + +GQ
Sbjct: 119 SISDSNTGIGNRDVIEDFTVGIDRIDLS-AIDANLDVAGNQAFSFIGTNDFSGAGVGQVR 177
Query: 380 FESMKH 385
F +
Sbjct: 178 FTQVFD 183
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 28/138 (20%)
Query: 271 VVGSSGN---------DVVIGN-------SANNVFFESSGNDVFDGSSGLDTFFYY---- 310
+ G+SGN D + G N+ GND G +G D F
Sbjct: 4 ISGTSGNNNLVGTANADTMFGYDLVVPSPDGNDTINGLGGNDTIYGGNGDDIIFGGFSSL 63
Query: 311 APSYLYKIYRFENAIIVYDANEH------KQDFLSDVERL--RFADQCIDSVNVKQRSIL 362
A S + N +V + D L+ + F D S
Sbjct: 64 AGSSDFLYGGNGNDSLVGGSGSDSLYGGNGNDTLTGGSGIDRMFGGAGADIFRFSSISDS 123
Query: 363 EYTASYEDLIQVIGQDVF 380
D+I+ +
Sbjct: 124 NTGIGNRDVIEDFTVGID 141
>gi|153214688|ref|ZP_01949548.1| RTX protein [Vibrio cholerae 1587]
gi|124115210|gb|EAY34030.1| RTX protein [Vibrio cholerae 1587]
Length = 2093
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 8/127 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQHTVIESVVGSSG 276
++ G DD + + G + I T S+S+ G + I ++ + G SG
Sbjct: 1893 LFMQGEDDSILINKDEGEDSAI--KTASFSTAHIDIAHGGGGDDRIYGQDGVDLMFGGSG 1950
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQ 335
ND + G N+ +GND DG +G D + E+ D + +
Sbjct: 1951 NDQLYGGEGNDGLRGGTGNDTLDGGAGNDILIGGLGDDILTGGSGEDLFKWVDGDLDGST 2010
Query: 336 DFLSDVE 342
D ++D
Sbjct: 2011 DRITDFH 2017
>gi|332976281|gb|EGK13142.1| hypothetical protein HMPREF9373_1351 [Psychrobacter sp. 1501(2011)]
Length = 1300
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 19/165 (11%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWSS------------IGGYEKNMTIAQ 264
T D G ++ T + + I+ N SWS I G N +
Sbjct: 1099 TAVDDDGLEVSSATKLVVDDSVINANGCSTIGSWSDDIIVAQNDDSHNIYGLIGNDLLIG 1158
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+S++G GND ++G+ N+ GND+ G +G DT Y + +
Sbjct: 1159 GNGKDSLIGGLGNDELVGHGGNDCLDGGIGNDILVGGNGNDTLKGGLGDDTYVFTKGDGK 1218
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ D + D L D+ +D +D + +
Sbjct: 1219 DLIMDLS--GNDTL-DLTSFTLSDIVVDRHGSDLVIQFDGQQANN 1260
>gi|262165797|ref|ZP_06033534.1| RTX toxin related protein [Vibrio mimicus VM223]
gi|262025513|gb|EEY44181.1| RTX toxin related protein [Vibrio mimicus VM223]
Length = 1505
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 14/151 (9%)
Query: 245 LNTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
LN S+ G N I ++ + G SGND + G N+ +GND D
Sbjct: 1328 LNITGASNAYVDIAHGGGGNDRIYGQGGVDLMFGGSGNDYIYGGEGNDGLRGGTGNDSLD 1387
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAI-----IVYDANEHKQDFLSDVERL----RFADQC 350
G G D + + E+ + + + DF +++ F+D+
Sbjct: 1388 GGVGNDILIGGLGNDILTGGEGEDLFKWVDRDLDGSKDRITDFTIGEDKIDLSDLFSDES 1447
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ ++E T +D VI + V E
Sbjct: 1448 RTLDQLLNSHVIEITEKGQDSEIVINKSVTE 1478
>gi|255068479|ref|ZP_05320334.1| putative type 1 secretion protein [Neisseria sicca ATCC 29256]
gi|255047280|gb|EET42744.1| putative type 1 secretion protein [Neisseria sicca ATCC 29256]
Length = 860
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 17/121 (14%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+IY G+D + ++ + I G + N + ++V G SGNDV
Sbjct: 620 DSIYAGNGNDTVFVS-------------GGTNFISGGDGNDIVRGGDGRDTVNGDSGNDV 666
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ GN ++ +GND G D F+ + + + D L
Sbjct: 667 IFGNGGDDHLNGGAGNDTLFGGENNDVFYGESGKD----VLYGGSGDDLLFGGLDDDILY 722
Query: 340 D 340
Sbjct: 723 G 723
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 11/168 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G +++T I G + I G + +I ++V S G + + G
Sbjct: 584 TAGFKSVNVTYITGTAGSDSIKGTDGIDHIDGKSGDDSIYAGNGNDTVFVSGGTNFISGG 643
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQD 336
N++ G D +G SG D F ++ EN + Y +
Sbjct: 644 DGNDIVRGGDGRDTVNGDSGNDVIFGNGGDDHLNGGAGNDTLFGGENNDVFYGESGKDVL 703
Query: 337 FLSDVERLRF---ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + L F D + + + ++ + G + +
Sbjct: 704 YGGSGDDLLFGGLDDDILYGGAGNDTYVFCFGEGHDTISDNHGNNALQ 751
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 48/159 (30%), Gaps = 18/159 (11%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS- 252
G+ + ++ + G D ++ G LN + +
Sbjct: 625 GNGNDTVFVSGGTNFISGGDGNDIVRGGDGRDTVNGDSGNDVIFGNGGDDHLNGGAGNDT 684
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDGS 301
+ G E N + + + G SG+D++ G +++ + +GND +
Sbjct: 685 LFGGENNDVFYGESGKDVLYGGSGDDLLFGGLDDDILYGGAGNDTYVFCFGEGHDTISDN 744
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + + + ++ + + S
Sbjct: 745 HGNNALQFGQGIAVKDLHIHASTDASGAIDWEITIANSG 783
>gi|163747756|ref|ZP_02155098.1| Hemolysin-type calcium-binding protein [Oceanibulbus indolifex
HEL-45]
gi|161378982|gb|EDQ03409.1| Hemolysin-type calcium-binding protein [Oceanibulbus indolifex
HEL-45]
Length = 1305
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 12/176 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GNNI +PF+ + + GDD++D+ + ID + + GYE + +I
Sbjct: 146 GNNIGSTTYANYQNPFLIEVDGTEGDDIMDVGFTDVDGDQIDGTDGNNEVVYGYEGDDSI 205
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++V G G+D G D+ DG DT Y + +
Sbjct: 206 NAGIGHDTVYGGDGDDT---------LAGGYGADIIDGGKDNDTADYSTSTGGVTVSLTT 256
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
DA D L+D+E L + + + L+ A + L G+D
Sbjct: 257 GKGTGSDAQG---DTLTDIENLTGSRFNDVLTGDDEDNRLDGGAGADKLYGADGED 309
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 28/150 (18%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ--TIYDSGGDDLL--------------D 232
K+YGA + + + T++ G D L D
Sbjct: 297 AGADKLYGADG---EDTLIGGDGADLLDGGKDDDTLFGRAGIDTLLGGKGKDHLDGGAGD 353
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
L GG + I L G + + + + G G+D + G + +++
Sbjct: 354 DRLEGGEDDDILL---------GGDGADALFGGEGKDILEGGLGDDSLNGGADDDILLGG 404
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+G+D +G +G DT + I +
Sbjct: 405 AGDDTLNGGAGDDTLTGGLGKDSFVIEAAD 434
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 37/146 (25%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ GG+D L + LN E +S G N +I ++++G SG+D +
Sbjct: 685 IFGGGGNDELVGS----------LNNELFS---GGTGNDSIFGGGGADTIMGGSGSDYIE 731
Query: 282 GNSANNVFFE------------------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G ++V + SSG+D G +G D + + +
Sbjct: 732 GGEGDDVLYTGTGDDTLDGGDGDDVLHNSSGDDSLVGGAGNDRLVASSGDDTLEGGADND 791
Query: 324 AII------VYDANEHKQDFLSDVER 343
+I D + D E
Sbjct: 792 TLIGGIHNDSLDGGSGDDRLMGDFEV 817
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 14/115 (12%)
Query: 214 KDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+I+ GG D + D L G + + + +
Sbjct: 704 SGGTGNDSIFGGGGADTIMGGSGSDYIEGGEGDDVLYTGTGDDTLDGGDGDDVLHNSSGD 763
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
++ + +V SSG+D + G + N+ ND DG SG D
Sbjct: 764 DSLVGGAGNDRLVASSGDDTLEGGADNDTLIGGIHNDSLDGGSGDDRLMGDFEVD 818
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 32/110 (29%), Gaps = 6/110 (5%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLSD 340
NS ++ GND G G DTF Y I F N + D + DF+
Sbjct: 979 NSFDDTLTGGEGNDTLIGGLGDDTFLYNVGDGHDTITDFNAGNTGTLSDGDSTNNDFI-- 1036
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L I ++ S +D F F+
Sbjct: 1037 --NLSGYYDNIRELHADYADDYTLNQSNKDSADYSNNTQFGDGSLFFNKA 1084
>gi|303245664|ref|ZP_07331947.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
gi|302492927|gb|EFL52792.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
Length = 246
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 68/219 (31%), Gaps = 42/219 (19%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
P++T E + L + P T D L+ Q R
Sbjct: 26 GLPLWTEESPSTGLT---VTYGFMTTALPAGET----VVDFAPLDLGQQAAVRLVYATAE 78
Query: 64 KVVDLTFEETSI--HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV------------ 109
+ L F ET+ +D+ F +++ T S + I D
Sbjct: 79 PLTGLHFVETADVSGADVAFGTADIADPGTLALTSTNEVLIAADDGTTTIDRQDYVYLDN 138
Query: 110 --WRYGIG---KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
W + GT+ LHEIGH LGL Y D+ +VMS
Sbjct: 139 AEWGGTLADARPGTLGYETILHEIGHTLGLD--------DTAYTQTLPDILDNTDYTVMS 190
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
Y + + Y + V D+ +Q +Y +G
Sbjct: 191 Y--------NETDTYKSMFGVLDMQTLQYLYADSGSIVG 221
>gi|89054981|ref|YP_510432.1| hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
gi|88864530|gb|ABD55407.1| Hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
Length = 833
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 225 SGGDDLLDLTLIGGVKN----YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G D LD G + N D+ +S G N TIA + + + G G+DV+
Sbjct: 454 GDGSDRLDFVGRGDLDNFGASIDDVVLVQLASPPGDGGNDTIAGGSGDDVIDGQGGDDVL 513
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + ++ +G+D+ G G D+ + + + + + D E D +
Sbjct: 514 DGGAGDDTITGGAGDDLIVGGPGADSLDGGTGNDTFAVGTSTDPVFGNDEGEGLGDTIVG 573
Query: 341 VE 342
E
Sbjct: 574 GE 575
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 27/143 (18%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+ + +I+ I+ D G + L T + D N I +
Sbjct: 175 GDGVVRIQAFDVSGDLIEVQLDGGSNVTLLDTDSVAGADSADSNGGYGPDISAEYSVLVT 234
Query: 263 AQHTVIESVV---------------------------GSSGNDVVIGNSANNVFFESSGN 295
V + + G+D ++G +++ + + G+
Sbjct: 235 IPGPVSQIQIFHVQDGSGNSGVNVTDVYFDVPNAGPPAGDGDDTLLGGEGDDLIYGNGGD 294
Query: 296 DVFDGSSGLDTFFYYAPSYLYKI 318
D G+SG DT F P+ +
Sbjct: 295 DSIQGNSGDDTLFGDDPADGTVV 317
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL + + + +G+D++ G +++ SGND DG +G
Sbjct: 9 DLRGGTNTDDAHGVTMSADGGDDTVR-----AGDDLLAGTGDDDLLLGGSGNDRADGGAG 63
Query: 304 LDTFFYYAPSYLYKIYR 320
DT F A R
Sbjct: 64 DDTIFGDAGGRGTTSLR 80
Score = 44.7 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 7/111 (6%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP---SYLYKIYR 320
++++G G+D++ GN ++ +SG+D G D + ++I
Sbjct: 272 AGDGDDTLLGGEGDDLIYGNGGDDSIQGNSGDDTLFGDDPADGTVVSGNLIFNGSFEITS 331
Query: 321 FEN----AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
N + + + S + D ++ L+ AS
Sbjct: 332 GMNTRGYGFVAMNGDAPGWTDASGGQIDFHNDGRGGIEPTDGQNWLDLEAS 382
>gi|113475198|ref|YP_721259.1| hypothetical protein Tery_1500 [Trichodesmium erythraeum IMS101]
gi|110166246|gb|ABG50786.1| hypothetical protein Tery_1500 [Trichodesmium erythraeum IMS101]
Length = 245
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPD--AFKALEYI 446
L+E FD YL D+ + + + HY+ G E R+ F LEY+
Sbjct: 27 ALAENYTREFDEQGYLRQNPDVAKLVSQGKYRSGYEHYVRSGQYENRSGAFKTFAELEYL 86
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ D+++A + DH+ G E R
Sbjct: 87 RQNPDVVDALRRGK--FKSAYDHYLKHGQYENRS 118
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 11/135 (8%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLR 496
F Y+ + D+ + + G +H+ G E R TF YL D+
Sbjct: 36 FDEQGYLRQNPDVAKLVSQGK--YRSGYEHYVRSGQYENRSGAFKTFAELEYLRQNPDVV 93
Query: 497 NVFGSDRG-AAARHYITHGVKEGRNPDAFK--ALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + +A HY+ HG E R+ ++ + A ++ +F + G ++
Sbjct: 94 DALRRGKFKSAYDHYLKHGQYENRSGASYSKYPSQPQALNDYYNQSFMTQNNRNCEGINY 153
Query: 554 FS---NFGYEEGRSI 565
F E R+I
Sbjct: 154 NLSQEAFFQTENRTI 168
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 10/111 (9%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL---YLTSYDDLW 580
F Y+ + D+ + ++G +H+ G E RS F YL D+
Sbjct: 36 FDEQGYLRQNPDVAKLVSQGK--YRSGYEHYVRSGQYENRSGAFKTFAELEYLRQNPDVV 93
Query: 581 NVFGSDR-SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
+ + +A HY+ HG E R+ G + + + D + S
Sbjct: 94 DALRRGKFKSAYDHYLKHGQYENRS----GASYSKYPSQPQALNDYYNQSF 140
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNP--DAFKALEYIA 531
E FD YL D+ + + HY+ G E R+ F LEY+
Sbjct: 28 LAENYTREFDEQGYLRQNPDVAKLVSQGKYRSGYEHYVRSGQYENRSGAFKTFAELEYLR 87
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
+ D+++A ++ DH+ G E RS
Sbjct: 88 QNPDVVDALRRGK--FKSAYDHYLKHGQYENRS 118
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRD---ITFDSYLYLGSYDD 410
++ Y D+ +++ Q + +H+ G E R TF YL D
Sbjct: 32 YTREFDEQGYLRQNPDVAKLVSQGKYRSGYEHYVRSGQYENRSGAFKTFAELEYLRQNPD 91
Query: 411 LRNVFGSDR-GAAARHYITHGVKEGRNPDAF 440
+ + + +A HY+ HG E R+ ++
Sbjct: 92 VVDALRRGKFKSAYDHYLKHGQYENRSGASY 122
Score = 42.8 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 6/92 (6%)
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALGISGMQFKSVMN 617
E + F+ YL D+ + + + +HY+ G E R+ FK+
Sbjct: 28 LAENYTREFDEQGYLRQNPDVAKLVSQGKYRSGYEHYVRSGQYENRSG-----AFKTFAE 82
Query: 618 LSEKSRDKADLSLSFDHKKVDLYTDYFGDGNY 649
L ++ + K Y Y G Y
Sbjct: 83 LEYLRQNPDVVDALRRGKFKSAYDHYLKHGQY 114
>gi|119484508|ref|ZP_01619125.1| hypothetical protein L8106_02282 [Lyngbya sp. PCC 8106]
gi|119457982|gb|EAW39105.1| hypothetical protein L8106_02282 [Lyngbya sp. PCC 8106]
Length = 1880
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 5/146 (3%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG G G+ + I + + + G+D DL G + + N + ++
Sbjct: 1693 YG---GQDGDTLMGGSGNDTLFGNIGSDFIA-GNDGNDLIYGGKDNDTLSGNQGND-TLY 1747
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + V G GND + G N+ +GND+ G+ G DT A S
Sbjct: 1748 GDLGNDVVVGGEGTDFVFGGEGNDTLDGGEGNDELTGGNGNDLLLGAEGNDTLTGEAGSD 1807
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD 340
+ + ++ D + + + D
Sbjct: 1808 RFVLVSGMGEDLITDFTDGEDIVVLD 1833
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 10/181 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ NI + + +P + GD ++ + ++ + S I G + N
Sbjct: 1553 SNTAANISSEDSSSQPTPNADILV---GDATDNIISALAGDDIVNSGDGNDS-INGNQDN 1608
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ + ++G NDV+ G++ N+ + G+DV DG G DT F +
Sbjct: 1609 DTVDGGNGNDVILGGKNNDVIFGSAGNDELNGNLGDDVVDGGEGADTVFGGQNNDTLTGG 1668
Query: 320 RFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ + DF+ E L + Q D++ + + D I
Sbjct: 1669 DGDDWL----NGNLGTDFVDGGEGEDLVYGGQDGDTLMGGSGNDTLFGNIGSDFIAGNDG 1724
Query: 378 D 378
+
Sbjct: 1725 N 1725
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 13/141 (9%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D L G + + I G + N I +++ G+ GND
Sbjct: 1699 DTLMGGSGNDTL----FGNIGSDF---------IAGNDGNDLIYGGKDNDTLSGNQGNDT 1745
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G+ N+V G D G G DT + + ++ + N+
Sbjct: 1746 LYGDLGNDVVVGGEGTDFVFGGEGNDTLDGGEGNDELTGGNGNDLLLGAEGNDTLTGEAG 1805
Query: 340 DVERLRFADQCIDSVNVKQRS 360
+ + D +
Sbjct: 1806 SDRFVLVSGMGEDLITDFTDG 1826
>gi|301610873|ref|XP_002934969.1| PREDICTED: matrix metalloproteinase-18-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 459
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 62/194 (31%), Gaps = 49/194 (25%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R+ W + Y+ T+H ++ A WS VV LTF S
Sbjct: 99 RNPVWKKKDLTYRILNYTSHMTRDEV-------DRAIEKAFKVWSDVVPLTFTRIYDRVS 151
Query: 78 DIKFISSNNGY-------------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI+ ++ + T +++FD + W G GT L A
Sbjct: 152 DIEMSFASGDHKDAFPFDGPAGILAHTFAPGDNTGGDVHFDADETWTSGSA-GTNLFLVA 210
Query: 125 LHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HE+GH+LGL H + YP Y Y P +
Sbjct: 211 AHELGHSLGLDHSNDPSALMYPTYH----------------YINPNTLQLSE-------- 246
Query: 184 MVSDIVAVQKIYGA 197
DI + +YG
Sbjct: 247 --DDIKGIHSLYGP 258
>gi|37726919|gb|AAO63003.1| collagenase 4 [Necturus maculosus]
Length = 237
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 71/219 (32%), Gaps = 50/219 (22%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD-- 78
W + Y+ T ++ + + + A WS V L F
Sbjct: 38 SVWETTTVTYRILNFTPDMPRANV-------ENLIQKAFKVWSDVTHLKFTRIFDGISDI 90
Query: 79 -IKFISSNNGY---------VCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALH 126
I F++ ++G +D Y + +++FD+ + W G GT+L + A H
Sbjct: 91 EISFVAGDHGDNSPFDGPGEFLAHAFDPGYGVGGDVHFDEDETWSKGED-GTVLFNIAAH 149
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGHALGL H +M F+ ++ D
Sbjct: 150 EIGHALGLAHSKDPGA-------------------LMFPFVLNLNIKDFRLS------QD 184
Query: 187 DIVAVQKIYG---APKGSLGNNIYKIEVQQKDSPFIQTI 222
DI +Q +YG P G + T+
Sbjct: 185 DINGIQSLYGLSVKPVQPTGPTTPSACDPNLTFDAVTTL 223
>gi|7496774|pir||T32166 hypothetical protein C31B8.8 - Caenorhabditis elegans
Length = 598
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 63/205 (30%), Gaps = 50/205 (24%)
Query: 13 IADHLLRDQY---WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
L WS + Y + ++ D+ + A G WSKV L
Sbjct: 146 APLALTSGSSQFKWSKTRLTYSIESWSSDLSKDDV-------RRAISEAYGLWSKVTPLE 198
Query: 70 FEETSIHSD----IKFI---------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
F E S I+F G V M +FD + W Y +
Sbjct: 199 FSEVPAGSTSDIKIRFGVRNHNDPWPFDGEGGVLAHATMPESGM-FHFDDDENWTYKDAR 257
Query: 117 ------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
T L A+HE GH LGL H N +M+ F +
Sbjct: 258 KIHNNEATDLLAVAIHEGGHTLGLEHSRDENA-------------------IMAPFYQKT 298
Query: 171 SMMDASFGYCATPMVSDIVAVQKIY 195
+ ++ Y DI A+Q IY
Sbjct: 299 TDSSGNYVYPN-LKSDDISAIQAIY 322
>gi|930269|emb|CAA38526.1| propeptide for matix metalloproteinase (type I collagenase) [Sus
scrofa]
Length = 445
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 67/197 (34%), Gaps = 30/197 (15%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A+ +L W N + Y+ + T D+ A WS V
Sbjct: 70 VPDVAEFVLTPGNPRWENTHLTYRIENYTPDLSREDV-------DRAIEKAFQLWSNVSP 122
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 123 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKN 182
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG---GYPVYGVDNDYENDSFLTSVMSYFMPQD 170
+ L A HE+GH+LGL H +Y D D + + + P +
Sbjct: 183 F-RDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDID-GIQAIYGPSE 240
Query: 171 SMMDASFGYCATPMVSD 187
+ + S TP V D
Sbjct: 241 NPVQPSG--PQTPQVCD 255
>gi|302875210|ref|YP_003843843.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578067|gb|ADL52079.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 1099
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 5/162 (3%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D V +Q + A + N +K + +I + G + D +L ++
Sbjct: 699 DSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSIVYANGTEEKD-SLYAAGPVTMN-G 756
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ N I I++++ +GND + G N++ + G+D+ +G G DT
Sbjct: 757 YGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDT 816
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ A +Y + + + D ++ LRF D
Sbjct: 817 LYGEAGQDIYVFRKGDGQDTINDTAGENNTI---IDTLRFED 855
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 8/186 (4%)
Query: 185 VSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
V DI A+ K Y + I + + I G+D L+ +
Sbjct: 904 VLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKVYGG 963
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + I G + T+ +++ GS+G D++ G S ++ G+D+ DG G
Sbjct: 964 NGDDT----IVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKG 1019
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT A S Y + + I+ D + ++ L+F D V++
Sbjct: 1020 TDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTI---IDTLKFEDIAASEVSLNCTGYDL 1076
Query: 364 YTASYE 369
A +
Sbjct: 1077 IIAVND 1082
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 66/174 (37%), Gaps = 8/174 (4%)
Query: 185 VSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
V DI A+ K Y + I + + I G+D L+ +
Sbjct: 518 VLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKVYGG 577
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + I G + T+ +++ GS+G D++ G S ++ G+D+ DG G
Sbjct: 578 NGDDT----IVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKG 633
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
DT A S Y + + I+ D + ++ L+F D V++
Sbjct: 634 TDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTI---IDTLKFEDIDASEVSLN 684
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G++ N T+ + V G +G+D ++GN+ ++ +G D GS+G D +
Sbjct: 556 INGFDGNDTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSE 615
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
E + D E D L+ +D + Q I++Y+ +I
Sbjct: 616 DDT---LNGEIGDDILDG-EKGTDTLTGG---AGSDTYVFRKGDGQDIIVDYSGEANTII 668
Query: 373 QVIGQDVFES 382
+ + ++
Sbjct: 669 DTLKFEDIDA 678
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G++ N T+ + V G +G+D ++GN+ ++ +G D GS+G D +
Sbjct: 942 INGFDGNDTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSE 1001
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
E + D E D L+ +D + Q I++Y+ +I
Sbjct: 1002 DDT---LNGEIGDDILDG-EKGTDTLTGG---AGSDTYVFRKGDGQDIIVDYSGEANTII 1054
Query: 373 QVIGQDVFES 382
+ + +
Sbjct: 1055 DTLKFEDIAA 1064
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
KN TI ++V G G+D++ G N++ G+D+ +G G DT + A +Y
Sbjct: 381 SKNETIFALASDDTVYGYGGDDLLYGGEGNDILHGGQGDDLLEGGLGNDTLYGEAGQDIY 440
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + + D ++ LRF D
Sbjct: 441 VFRKGDGQDTINDTAGENNTI---IDTLRFED 469
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 6/92 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I + T+ + + + G GND++ G +++ GND G +G D + +
Sbjct: 385 TIFALASDDTVYGYGGDDLLYGGEGNDILHGGQGDDLLEGGLGNDTLYGEAGQDIYVFRK 444
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
I N D L +
Sbjct: 445 GDGQDTINDTAGE------NNTIIDTLRFEDI 470
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S N TI +++GS D + G S + G+D +G G DT+ +
Sbjct: 223 SYYTYVTGNGTIEGTIGKNNIIGSVNTDQISGLSGADFIDGKGGSDYINGGVGNDTYIFN 282
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
I ++ A V D + + D+ + F
Sbjct: 283 LGYGTMVIEDYDEATGVIDTIKFGEGI--DINSIGF 316
>gi|297537207|ref|YP_003672976.1| Hemolysin-type calcium-binding region [Methylotenera sp. 301]
gi|297256554|gb|ADI28399.1| Hemolysin-type calcium-binding region [Methylotenera sp. 301]
Length = 1902
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 14/205 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + P T G+D + T + ++ S+ GG + I
Sbjct: 841 YTFDQLMAAYPIALT----DGNDSANFTSGNVEIVHAGAGDDTVSTFGG---DDVIDGEA 893
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GND + G S N+ +GNDV DG +G DT S Y + +
Sbjct: 894 GNDYLNGGDGNDTLYGGSGNDNLSGDTGNDVLDGGTGDDTMSGGEGSDTYVVRTGSGQDV 953
Query: 327 VYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + N + + L+FAD + +Q S L D +++ Q +S
Sbjct: 954 INNINNSSEAV---TDTLQFADIASTGLTSLSRQGSSLIIGYGNGDSVKLQYQFYGDSSY 1010
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYD 409
+F S+G + TFD + +Y
Sbjct: 1011 QVTQFKFSDGVNYTFD--QLMAAYP 1033
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 10/160 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + P T G+D + T + ++ S+ GG + I
Sbjct: 1023 YTFDQLMAAYPIALT----DGNDSANFTSGNVEIVHAGAGDDTVSTFGG---DDVIDGEA 1075
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GND + G S N+ +GNDV DG +G DT + Y I + +
Sbjct: 1076 GNDYLNGGDGNDTLYGGSGNDNLSGDTGNDVLDGGTGDDTMSGGEGNDTYTIDVLTD--V 1133
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + D L +V + + NV+ +++ A
Sbjct: 1134 ITENLNEGTD-LVNVAIATASGTYTVAANVENATLINTVA 1172
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 65/192 (33%), Gaps = 24/192 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---------WSSIGGYEKNM 260
T+ G+D + + V +LN + S N+
Sbjct: 1470 NDTLNGLAGNDTMIGGLGNDTYTIDALTDVVTE-NLNEGTDLVNVAIATASGTYTVAANV 1528
Query: 261 TIAQ--HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A ++V ++ G+ N+V+ GN+ N +GND +G +G+DT Y +
Sbjct: 1529 ENANLVNSVAYTLSGNELNNVLTGNAYANTLNGLAGNDTLNGGAGVDTLVGGDGDDTYIV 1588
Query: 319 YRFENAIIVYDANEHKQDFL-----------SDVERLRFADQC-IDSVNVKQRSILEYTA 366
+ I D D + S++E L I++ + ++ +
Sbjct: 1589 DTTTDVITEADTVGAGVDTVQSSVTYVLGATSNLENLTLTGTTAINATGNALANFMKGNS 1648
Query: 367 SYEDLIQVIGQD 378
+ + G +
Sbjct: 1649 ANNTITDTAGGN 1660
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 67/199 (33%), Gaps = 15/199 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTIAQHT 266
+ T+ G+D + ++ V +LN + ++
Sbjct: 1278 SANNTLNGAAGADTMIGGLGNDTYTIDMLTDVVTE-NLNEGTDLVNVAIATTGGAYTVAA 1336
Query: 267 VIESVV----------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+E+ G++ ++++IGN+A N +GND +G +G DT + +Y
Sbjct: 1337 NVENATLTNTVTYSLTGNALDNILIGNAAVNTLNGGAGNDTLNGLAGSDTMIGGLGNDIY 1396
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I + ++ + D L +V + + NV+ ++ A +
Sbjct: 1397 TIDVLTD--VITENLNEGTD-LVNVAIATASGTYTVAANVENATLTNTVAYSLTGNVLDN 1453
Query: 377 QDVFESMKHFYEFGLSEGR 395
+ + + G
Sbjct: 1454 VLTGNAAANTLDGGAGNDT 1472
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 13/186 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-------IGGYEKNMTI 262
T+ G+D + + + + +L+ + + + +N+T+
Sbjct: 1199 NDILDGGTGADTMKGGKGNDTYIVDNVADIVSE-NLDEGTDTVQSSATYLLTANIENLTL 1257
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ I + VG++ ++++IGNSANN ++G D G G DT+ + + E
Sbjct: 1258 TGNVAI-NGVGNALDNIMIGNSANNTLNGAAGADTMIGGLGNDTYTIDMLTDVVTENLNE 1316
Query: 323 NAIIVYDA---NEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+V A ++VE + +IL A+ L G D
Sbjct: 1317 GTDLVNVAIATTGGAYTVAANVENATLTNTVTYSLTGNALDNILIGNAAVNTLNGGAGND 1376
Query: 379 VFESMK 384
+
Sbjct: 1377 TLNGLA 1382
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 33/122 (27%), Gaps = 3/122 (2%)
Query: 206 IYKIEVQQKDSP---FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
Y + T ++ G+ L + N I + + N T
Sbjct: 1613 TYVLGATSNLENLTLTGTTAINATGNALANFMKGNSANNTITDTAGGNDILQAFAGNDTF 1672
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
G GND++ S ++ GND +G D + I
Sbjct: 1673 NDTVGNNLFDGGLGNDLITAGSGRDIIIGGQGNDTITTGTGYDVIVFNKGDGQDIINAST 1732
Query: 323 NA 324
A
Sbjct: 1733 GA 1734
Score = 44.3 bits (103), Expect = 0.072, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 20/143 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
KG+ NN D G+D + T+ + G
Sbjct: 1645 KGNSANNTITDTAGGNDILQAFA-----GNDTFNDTVGNNL-------------FDGGLG 1686
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N I + + ++G GND + + +V F + G D+ + S+G D ++ Y
Sbjct: 1687 NDLITAGSGRDIIIGGQGNDTITTGTGYDVIVFNKGDGQDIINASTGADNTISLGGNFAY 1746
Query: 317 KIYRFENAIIVYDANEHKQDFLS 339
+ D ++
Sbjct: 1747 SDLSLTKSTNDLILKMGASDQIT 1769
>gi|218709385|ref|YP_002417006.1| putative hemolysin-type calcium-binding region [Vibrio splendidus
LGP32]
gi|218322404|emb|CAV18557.1| putative hemolysin-type calcium-binding region [Vibrio splendidus
LGP32]
Length = 1883
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 62/165 (37%), Gaps = 13/165 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--------DLN- 246
G L N + Q + +I+ ++ G D + L G + I +L+
Sbjct: 1639 GDSHAVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQGEDSEIAATNNSTANLDV 1698
Query: 247 --TESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S I G + I + + + G GND + G + ++ SG+D+ G G
Sbjct: 1699 AHGGGGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTGHDTLKGGSGDDILIGGIG 1758
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
D + ++K + + + + + DF +++ +D
Sbjct: 1759 NDILTGGSDDDIFKFVD-QGSGVRHGEKDTITDFTKGDDKIDISD 1802
>gi|104779436|ref|YP_605934.1| surface adhesion protein [Pseudomonas entomophila L48]
gi|95108423|emb|CAK13117.1| Surface adhesion protein [Pseudomonas entomophila L48]
Length = 5862
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + T+ G+D++ G +YID G + N + T
Sbjct: 5672 YTEFDVSRSNDGADTLLGGNGNDII---FGQGGNDYID----------GGKGNDILLGGT 5718
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
++++G GND++ G + N++ GND+ G +G DTF + A +
Sbjct: 5719 GNDTLLGGEGNDLLFGGAGNDLLIGGKGNDIMTGGTGADTFVWKAGDLGNDV 5770
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N I + + G GND+++G + N+ GND+ G +G D +
Sbjct: 5689 GGNGNDIIFGQGGNDYIDGGKGNDILLGGTGNDTLLGGEGNDLLFGGAGNDLLIGGKGND 5748
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDV 341
+ V+ A + D + D
Sbjct: 5749 IMT-GGTGADTFVWKAGDLGNDVIKDF 5774
>gi|268679627|ref|YP_003304058.1| hypothetical protein Sdel_0994 [Sulfurospirillum deleyianum DSM
6946]
gi|268617658|gb|ACZ12023.1| hypothetical protein Sdel_0994 [Sulfurospirillum deleyianum DSM
6946]
Length = 585
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 66/183 (36%), Gaps = 13/183 (7%)
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK--DS 216
TS S DA +G ++ IYG G ++IY + +K
Sbjct: 154 NTSGWSSSDASQGNYDAIYGSNNDDILRGDSKTDAIYG---GGGKDDIYGGSLAEKLYGG 210
Query: 217 PFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
I SGG+D + TL GG L ++ G + T+ +++
Sbjct: 211 EGDDFIDGSGGNDTIEGAEGKDTLDGGDGTDTLLGGTGDDNLFGDAGDDTLNGGEDNDTL 270
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G SG D ++G S N+ G D +G +G DT Y Y N + D++
Sbjct: 271 NGGSGLDTLLGESGNDTLIGGGGADTLNGGTGSDTLLGG---DDYDTYIAGNGDTINDSD 327
Query: 332 EHK 334
Sbjct: 328 GSG 330
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 68/231 (29%), Gaps = 11/231 (4%)
Query: 241 NYIDLNTESWSSIGGYEKNM-TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
NY+ NT WSS + N I + + G S D + G + + S +
Sbjct: 149 NYLFGNTSGWSSSDASQGNYDAIYGSNNDDILRGDSKTDAIYGGGGKDDIYGGSLAEKLY 208
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVK 357
G G D F I E + D L + F D D++N
Sbjct: 209 GGEGDD--FIDGSGGNDTIEGAEGKDTLDGG--DGTDTLLGGTGDDNLFGDAGDDTLNGG 264
Query: 358 QRS-ILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSY-LYLGSYDDLRN 413
+ + L + + L+ G D + G + D Y Y+ D N
Sbjct: 265 EDNDTLNGGSGLDTLLGESGNDTLIGGGGADTLNGGTGSDTLLGGDDYDTYIAGNGDTIN 324
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
I +G K ++ ++ + D F V
Sbjct: 325 DSDGSGRVTFEGGILNGGKWNKDTQTYEGNGGNYNLNDGTLTFTSGAGSVT 375
>gi|125838084|ref|XP_001345507.1| PREDICTED: collagenase 3 [Danio rerio]
Length = 461
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 59/200 (29%), Gaps = 53/200 (26%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET- 73
+H RD W + ++ T R AL WSKV L F +T
Sbjct: 96 NHFPRDLKWKTTNVTFRILNYTPDLKK-------KVVDRAVRKALNVWSKVTPLRFTKTF 148
Query: 74 SIHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
+DI + P + +FD+ + W
Sbjct: 149 DGTADIMISFGTKEHGDFNPFDGPEGLLAHAYPPGIGIGG--DTHFDEDETWTEDY-HAF 205
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A HE GHALG+ H S + V SY + G
Sbjct: 206 NLFLVAAHEFGHALGMAHSSDPG---------------SLMYPVYSY----------AKG 240
Query: 179 YCATPMVSDIVAVQKIYGAP 198
+ + DI +Q +YG
Sbjct: 241 FPLS--EDDIEGIQSLYGEN 258
>gi|85705414|ref|ZP_01036512.1| hypothetical protein ROS217_01290 [Roseovarius sp. 217]
gi|85669839|gb|EAQ24702.1| hypothetical protein ROS217_01290 [Roseovarius sp. 217]
Length = 818
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 55/145 (37%), Gaps = 10/145 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GS+GN++ T+ G+D + + I+ + GG +
Sbjct: 615 TGSIGNDV------VAGGAGNDTLEGGDGNDSMSGSF---GNELINAGGGTDDVGGGTGR 665
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ TI + V G G+D++ G + ++ ND DG +G DT A + +
Sbjct: 666 D-TIDAGAGNDRVGGGEGDDLISGGAGSDFLAGGGRNDTIDGGTGNDTLNGGAGNDVMTG 724
Query: 319 YRFENAIIVYDANEHKQDFLSDVER 343
+ + + + D ++D E
Sbjct: 725 GAGADQFVFSAFFDGEADVIADFED 749
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 40/141 (28%), Gaps = 10/141 (7%)
Query: 253 IGGYEKNMTIAQH---------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G E N +I + + G G D + G+ N+V +GND +G G
Sbjct: 578 LDGGEGNDSIGGGLGNDTIDGGDGDDIIGGGFGADSITGSIGNDVVAGGAGNDTLEGGDG 637
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D+ + L + D + +R+ + L
Sbjct: 638 NDSMSGSFGNELIN-AGGGTDDVGGGTGRDTIDAGAGNDRVGGGEGDDLISGGAGSDFLA 696
Query: 364 YTASYEDLIQVIGQDVFESMK 384
+ + G D
Sbjct: 697 GGGRNDTIDGGTGNDTLNGGA 717
Score = 43.6 bits (101), Expect = 0.100, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 1/134 (0%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
SWS + + ++ + E+ G + +V G+ A++ GND G G D
Sbjct: 520 SWSILYMKIEVVSTGEPQRAEAPSGDAARRIVTGSEAHDNLHGGLGNDTLRGLDGDDQLD 579
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ N I + + + + LE
Sbjct: 580 GGEGNDSIG-GGLGNDTIDGGDGDDIIGGGFGADSITGSIGNDVVAGGAGNDTLEGGDGN 638
Query: 369 EDLIQVIGQDVFES 382
+ + G ++ +
Sbjct: 639 DSMSGSFGNELINA 652
>gi|1514967|dbj|BAA11526.1| collagenase 3 [Cynops pyrrhogaster]
Length = 471
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 60/195 (30%), Gaps = 47/195 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHS 77
R W + + Y+ + T ++ + A WS+V L F S +
Sbjct: 109 RSLKWPRFNLTYRIENYTPDMTHAEV-------DRAIKKAFRVWSEVTPLNFTRLRSGTA 161
Query: 78 DIKFISSN------------NGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNA 124
DI NG + + + +FD + + G G L A
Sbjct: 162 DIMISFGTKEHGDFYPFDGPNGLLAHAFPPGQRIGGDTHFDDDETFTSGSN-GYNLFIVA 220
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GHALGL H S + V SY P ++
Sbjct: 221 AHEFGHALGLDHSRDPG---------------SLMYPVYSYTEPSRFLLP---------- 255
Query: 185 VSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 256 DDDVQGIQSLYGPGN 270
>gi|301610875|ref|XP_002934970.1| PREDICTED: matrix metalloproteinase-18-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 459
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 62/194 (31%), Gaps = 49/194 (25%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R+ W + Y+ T+H ++ A WS VV LTF S
Sbjct: 99 RNPVWKKKDLTYRILNYTSHMTRDEV-------DRAIEKAFKVWSDVVPLTFTRIYDRVS 151
Query: 78 DIKFISSNNGY-------------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI+ ++ + T +++FD + W G GT L A
Sbjct: 152 DIEMSFASGDHKDAFPFDGPSGILAHTFAPGDNTGGDVHFDADETWTSGSA-GTNLFLVA 210
Query: 125 LHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HE+GH+LGL H + YP Y Y P +
Sbjct: 211 AHELGHSLGLDHSNDLSALMYPTYH----------------YTNPNTFQLSE-------- 246
Query: 184 MVSDIVAVQKIYGA 197
DI + +YG
Sbjct: 247 --DDIKGIHSLYGP 258
>gi|291222645|ref|XP_002731327.1| PREDICTED: GK21871-like [Saccoglossus kowalevskii]
Length = 535
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 64/199 (32%), Gaps = 48/199 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR-WALGEWSKVVDLTFEET-SI 75
L W + ++ T ++ Q A A WS V LTF+E S
Sbjct: 106 LAGSKWKKTDLTFRFLGYTYD--------MDKQQQRAAIYEAFKRWSDVTPLTFKEVTSD 157
Query: 76 HSDIKFISSN--------NGYVCTPRY-DSRYFM---EINFDKADVWRYGIGKGTILSHN 123
+DI + + YF +++FD + + G L
Sbjct: 158 EADIYIEFATRIHSDGPLAAFDGPGGTLAHAYFPEHGDMHFDDDEYFTRFSKDGINLDGT 217
Query: 124 ALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
ALHE+GH+LGL H + YP+Y Y N
Sbjct: 218 ALHELGHSLGLSHSNNKQAVMYPIYRKYEYYPNLQLS----------------------- 254
Query: 183 PMVSDIVAVQKIYGAPKGS 201
DI+ +Q +YG +
Sbjct: 255 --QDDIMGIQALYGQYSSN 271
>gi|73955224|ref|XP_546546.2| PREDICTED: similar to Interstitial collagenase precursor (Matrix
metalloproteinase-1) (MMP-1) (Fibroblast collagenase)
[Canis familiaris]
Length = 465
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 62/207 (29%), Gaps = 50/207 (24%)
Query: 10 TERIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+A ++L D W + + Y+ + T ++ A WS V L
Sbjct: 94 VPDVAQYVLTDGSQWDHTHLTYRIENYTPDLPRAEV-------DSAIEKAFQLWSNVSPL 146
Query: 69 TFEET-SIHSDI-------------KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
TF + +DI F N + +I+FD+ + W
Sbjct: 147 TFTKVFEGQADIMISFVWGDHRDNSPFDGPNGNLAHAFQPGPNLGGDIHFDEDETWTNNF 206
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
+ L A HE+GH+LGL H +M +
Sbjct: 207 -RNYNLYRVAAHELGHSLGLSHSTDIGA-------------------LM--------YPN 238
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ DI +Q IYG +
Sbjct: 239 YMYSGNVQLSQDDINGIQAIYGPSQNP 265
>gi|45384534|ref|NP_990331.1| matrix metalloproteinase-27 [Gallus gallus]
gi|3511149|gb|AAC33733.1| matrix metalloproteinase [Gallus gallus]
Length = 472
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 72/215 (33%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
KP + + + W + Y+ T D+++ + + A S
Sbjct: 94 KPRCGVPDVGLYGVTLPGWKKNNLTYRIVNYTP-----DLSK--EVVDKAIQKAFKARST 146
Query: 65 VVDLTFEETSIH-SDIKFISSNNGYVCTPRY--------------DSRYFMEINFDKADV 109
V L F +DI + PRY S + +++FD+ +
Sbjct: 147 VTPLIFARIQEGIADIMVAFGTKAHGHCPRYFDGPLGVLAHAFPPGSGFGGDVHFDEDED 206
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMP 168
W G G L A HE+GHALGL HP +P Y Y P
Sbjct: 207 WTMGSD-GFNLFLVAAHEVGHALGLSHPNDQRAFMFPNYA----------------YISP 249
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ + +P DI +Q IYG+ + G
Sbjct: 250 SE--------FPLSP--DDISGIQSIYGSATKTPG 274
>gi|326914432|ref|XP_003203529.1| PREDICTED: interstitial collagenase-like [Meleagris gallopavo]
Length = 466
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 66/218 (30%), Gaps = 52/218 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T D+ E + AL WS V LTF+ +DI
Sbjct: 109 WKKTNLTYRIVNYTRKMRQTDV-------DEAIQKALNVWSSVTPLTFQRIEDKIADIMI 161
Query: 82 I------SSNNGYVCTPRYDSRYFMEINFDKADV-------WRYGIGKGTILSHNALHEI 128
+ N+ + + F DV W G+G L HE+
Sbjct: 162 SFAYRDHNDNSPFDGPGGLLAHAFQPGEGLGGDVHMDEEETWTKD-GRGYNLFIVVAHEL 220
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YP Y Y P++ ++ D
Sbjct: 221 GHSLGLSHSNDPGALMYPNYA----------------YTDPKEFLLPQ----------DD 254
Query: 188 IVAVQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTI 222
I +Q IYG G ++ I T+
Sbjct: 255 IDGIQAIYGPSSDAVQPTGPTTPQVCDPNLTFDAITTL 292
>gi|297269067|ref|XP_002799829.1| PREDICTED: interstitial collagenase [Macaca mulatta]
Length = 403
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 67/232 (28%), Gaps = 54/232 (23%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T + A WS V
Sbjct: 28 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPR-------AAVDQAIEKAFQLWSNVTP 80
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 81 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 140
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE GH+LGL H +M
Sbjct: 141 F-REYNLYRVAAHEFGHSLGLAHSTDIGA-------------------LM--------YP 172
Query: 174 DASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNIYKIEVQQKDSPFIQTI 222
+F DI +Q IYG P G K+ + I TI
Sbjct: 173 SYTFSGDVQLAQDDIDGIQAIYGGSQNPVQPTGPQTPKVCDSKLTFDAITTI 224
>gi|158336214|ref|YP_001517388.1| glycerophosphoryl diester phosphodiesterase [Acaryochloris marina
MBIC11017]
gi|158306455|gb|ABW28072.1| glycerophosphoryl diester phosphodiesterase, putative [Acaryochloris
marina MBIC11017]
Length = 1881
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + TI ++++G GND++ G ++ F G D +G+ G D
Sbjct: 1731 DLSGGRGDDTITGGLGDDNLMGGRGNDLLEGGQGDDDLFGGRGLDTLNGNEGSDILVGGR 1790
Query: 312 PSYLYKIYRFEN--AIIVYDANEHKQDFLSDVERLRFADQ 349
L E+ A+ D + DFL + +
Sbjct: 1791 GDDLLTGGSGEDLFALAASDGTDTITDFLIGEDVVGLIGG 1830
>gi|148690305|gb|EDL22252.1| matrix metallopeptidase 25 [Mus musculus]
Length = 562
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 73/208 (35%), Gaps = 50/208 (24%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVAR----WALGEWSKVVD 67
A + R + +S +K LT SF ++L+P ++ R +AL W+
Sbjct: 100 AAGLVRRRRRYSLSGSVWKKRTLTWSIRSFSQKSQLSP---QIVRTLLSYALAVWATESG 156
Query: 68 LTFEETSIHSD-----IKFI---------SSNNGYVCTPRYDSRYFM---EINFDKADVW 110
LTF+E + I F +G + + +FD + W
Sbjct: 157 LTFQEVNSQYQEPDIIIHFARAYHQDSYPFDGSGGTLAHAFFPGEHPISGDTHFDDEETW 216
Query: 111 RYGI--GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+G G L A+HE GHALGL H + N S+M F
Sbjct: 217 TFGSTDDNGIDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQ 257
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYG 196
A++ D +Q++YG
Sbjct: 258 GPVGDPATYRLPQ----DDRDGLQQLYG 281
>gi|126741048|ref|ZP_01756730.1| hypothetical protein RSK20926_01017 [Roseobacter sp. SK209-2-6]
gi|126717812|gb|EBA14532.1| hypothetical protein RSK20926_01017 [Roseobacter sp. SK209-2-6]
Length = 858
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 71/213 (33%), Gaps = 24/213 (11%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDL 245
A ++YG IY G+D L D I G + L
Sbjct: 507 AADRLYGQ----------GGHDSLAGGDGADRIYGGTGNDHLSGEADSDRIEGEDGHDSL 556
Query: 246 NTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
S + G N ++A T + + G GND + G+S+ + + GND G +G
Sbjct: 557 FGGSAHDSLYGGMGNDSLAGETGADHLYGGWGNDTLSGDSSTDRLYGEGGNDSLTGGTGN 616
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSI-- 361
DT + A F N+ + E D++S + + F + + +
Sbjct: 617 DTLYGGAGHDRL----FGNSSLDTLYGEGGHDYISAGDGVDFVSGGSGNDTIHGRSGWDN 672
Query: 362 LEYTASYEDLIQVIGQD--VFESMKHFYEFGLS 392
LE + L G D + G +
Sbjct: 673 LEGGDGNDSLYGSEGDDLIRGGRDNDWVSAGSA 705
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 63/209 (30%), Gaps = 20/209 (9%)
Query: 190 AVQKIYGA--PKGSLGNN----IYKIEVQQKDSPFIQT--IYDSGGDD-----LLDLTLI 236
A +YG G +Y S T +Y GG+D + TL
Sbjct: 561 AHDSLYGGMGNDSLAGETGADHLYGGWGNDTLSGDSSTDRLYGEGGNDSLTGGTGNDTLY 620
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + S ++ G + I+ ++ V G SGND + G S + GND
Sbjct: 621 GGAGHDRLFGNSSLDTLYGEGGHDYISAGDGVDFVSGGSGNDTIHGRSGWDNLEGGDGND 680
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDS 353
GS G D + + I D L +++
Sbjct: 681 SLYGSEGDDLIRGGRDNDWVSAGSAWDQI----FGNSGDDTLYGNFGSDQISGGSGRDSL 736
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFES 382
L +S + L G D E
Sbjct: 737 FGGTGDDTLRGGSSSDALYGNQGVDHLEG 765
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 9/140 (6%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGG 255
+ I+ ++Y S GDDL+ D G + I N+ ++ G
Sbjct: 662 DTIHGRSGWDNLEGGDGNDSLYGSEGDDLIRGGRDNDWVSAGSAWDQIFGNSGDD-TLYG 720
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I+ + +S+ G +G+D + G S+++ + + G D +G SG DT +
Sbjct: 721 NFGSDQISGGSGRDSLFGGTGDDTLRGGSSSDALYGNQGVDHLEGGSGNDTLRGGTLADS 780
Query: 316 YKIYRFENAIIVYDANEHKQ 335
+ ++ ++ D +
Sbjct: 781 FIFAPNHDSDLIEDFTPWQD 800
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 54/182 (29%), Gaps = 22/182 (12%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ + + +GG+D + L + + G + ++A + + G
Sbjct: 485 NGTAAAEQLVGAGGNDTV-------------LGLGAADRLYGQGGHDSLAGGDGADRIYG 531
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND + G + ++ G+D G S D+ + + +
Sbjct: 532 GTGNDHLSGEADSDRIEGEDGHDSLFGGSAHDSLYGGMGNDSLA----GETGADHLYGGW 587
Query: 334 KQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYE 388
D LS +RL L A ++ L D E +
Sbjct: 588 GNDTLSGDSSTDRLYGEGGNDSLTGGTGNDTLYGGAGHDRLFGNSSLDTLYGEGGHDYIS 647
Query: 389 FG 390
G
Sbjct: 648 AG 649
Score = 37.0 bits (84), Expect = 9.8, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 58/210 (27%), Gaps = 25/210 (11%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNT 247
A ++++G G +I+ S + D +D +DL G+++ L
Sbjct: 377 AAQRRLWG----GAGEDIFVFAAGASRSGASCRVMDFNPEEDRIDLQAWAGLRSVDQLQI 432
Query: 248 ESWSSIGGYEKNM-----------TIAQHTVIESVVGSSGN-----DV---VIGNSANNV 288
S S+ + I + + D + G +A
Sbjct: 433 TSHSNGATLRYGAYELRLITSDTRALTYEDFILNDLLGLYRPPLPTDTPLVLNGTAAAEQ 492
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ GND G D + + I N+H +D +R+ D
Sbjct: 493 LVGAGGNDTVLGLGAADRLYGQGGHDSLAGGDGADRIYGGTGNDHLSGE-ADSDRIEGED 551
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
L + L G D
Sbjct: 552 GHDSLFGGSAHDSLYGGMGNDSLAGETGAD 581
>gi|291383989|ref|XP_002708607.1| PREDICTED: matrix metalloproteinase 10 [Oryctolagus cuniculus]
Length = 477
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 65/200 (32%), Gaps = 50/200 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W+ + Y+ T AL W +V LTF
Sbjct: 109 WTKTHLTYRIVNYTPDLPR-------DAVDAAIEKALKVWEEVTPLTFSRKHEGEADIMI 161
Query: 73 ---TSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D + GY Y + +++FD + W GT L A HE
Sbjct: 162 SFAVKEHGDF-YPFDGPGYSLAHAYPPGPGLYGDVHFDDDEKWT-ESASGTNLFLVAAHE 219
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+GH+LGL+H + YPVY ++ D + +
Sbjct: 220 LGHSLGLLHSANPEALMYPVY----------------------NTFTDLARFRLSQ---D 254
Query: 187 DIVAVQKIYGAPKGSLGNNI 206
D+ +Q +YG P S G ++
Sbjct: 255 DVDGIQSLYGPPPTSPGTSV 274
>gi|260820866|ref|XP_002605755.1| hypothetical protein BRAFLDRAFT_121873 [Branchiostoma floridae]
gi|229291090|gb|EEN61765.1| hypothetical protein BRAFLDRAFT_121873 [Branchiostoma floridae]
Length = 488
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 63/185 (34%), Gaps = 27/185 (14%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
W + Y+ + T + + +AR A W++V LTF S +DI
Sbjct: 86 GSRWQKNDLTYRINNFTPDLPRDQVVD------AIAR-AFDVWAQVTPLTFRRVSGPADI 138
Query: 80 --KFISSNNGY-----------VCTPRYDSRYFMEINFDKADVWRYGIG-----KGTILS 121
+F + ++G + + +FD++++W+ G GT L
Sbjct: 139 EIRFAAGSHGDGNSFDSRGGVLAHAYQPGGGIGGDAHFDESEIWQIGGPNIASLSGTDLF 198
Query: 122 HNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTS-VMSYFMPQDSMMDASFGY 179
A HE GH+LGL H + P Y D S + S +
Sbjct: 199 SVAAHEFGHSLGLGHSQVNSALMAPFYRYQRSLRLDRDDISGIQSLYGGPRPEPRPQPTP 258
Query: 180 CATPM 184
P
Sbjct: 259 APRPQ 263
>gi|5305316|gb|AAD41583.1|AF057703_1 structural toxin protein RtxA [Legionella pneumophila 130b]
Length = 1208
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND + G N+V SGNDV G +G DT + + + + + +
Sbjct: 517 DTIGGGQGNDQIYGQEGNDVIDGGSGNDVIVGGTGNDTLTGGSGADQFVLVKGQGGASTG 576
Query: 329 DAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A + DF +++++ I V+V YT
Sbjct: 577 VAPIDTITDFEVNIDKIVINGNNITGVSVSTPVSNTYT 614
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GNDV+ G + N+ GND G G+DTFF+ + + D
Sbjct: 1059 LNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDED------GGVDTITDF 1112
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ D SD L +D + +++ S+ Y
Sbjct: 1113 KANPVDKSSDASVLNLSD-LLSDADLETNSLDNYL 1146
>gi|317419325|emb|CBN81362.1| Matrix metalloproteinase-17 [Dicentrarchus labrax]
Length = 572
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 51/206 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---- 71
+ L W + + + LS + N + AL WS L F
Sbjct: 105 YALSGLKWHKTDLTWSVHSYPSPSLSPGLP--NSLVDNILTHALKAWSDAAPLNFRWLPS 162
Query: 72 ---ETSIHSDIKFISS----NNGYVCTPRYDSRYF----------MEINFDKADVWRYGI 114
+ DI+ + ++GY + + + +FD ++W YG
Sbjct: 163 DSRVAAAGGDIRVSFTSMFHDDGYPFDGQGGTLAHAFFPGRNDMAGDTHFDDDEIWSYGG 222
Query: 115 GKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDS 171
T L A+HE GHALGL H S S+M Y P
Sbjct: 223 SSSTTDLFTVAVHEFGHALGLSHS-------------------SSDPSIMRPYYQGPVGD 263
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGA 197
+ + + D A+Q++YG
Sbjct: 264 IQNFMLA------LDDKQAIQQLYGV 283
>gi|296480362|gb|DAA22477.1| matrix metalloproteinase 27 [Bos taurus]
Length = 510
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 64/194 (32%), Gaps = 48/194 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + L WSKV L F + S +DI
Sbjct: 105 WKKYNLTYRIVNYTPDMARADV-------DEAIQKGLEVWSKVTPLIFTKISKGIADIMI 157
Query: 82 ISSNNGYVCTPRYDSRYFM--------------EINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 158 AFKTRVHGSCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKD-GVGFSLFLVAAHE 216
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H T++M P +D S + D
Sbjct: 217 FGHSLGLSHSSD-------------------QTALM---FPNYVSLDPSKYPLSQ---DD 251
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG PK
Sbjct: 252 INGIQSIYGPPKVP 265
>gi|73853842|ref|NP_001027506.1| matrix metallopeptidase 13 (collagenase 3) [Xenopus (Silurana)
tropicalis]
gi|67867494|gb|AAH98086.1| hypothetical protein mgc108008 [Xenopus (Silurana) tropicalis]
Length = 261
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 57/195 (29%), Gaps = 49/195 (25%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI----- 75
Q W+ + Y+ T + E R A WS V L F S
Sbjct: 100 QRWTKTQLTYRIVNYTPDLPRSMV-------DEAIRLAFKVWSDVTPLKFTRISSRRADI 152
Query: 76 --------HSD-IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D I F N S + +FD+ + W G L A H
Sbjct: 153 MIQFGARSHGDFIPFDGPNGVLAHAFAPGSGIGGDAHFDEDERWT-STSAGFNLFLVAAH 211
Query: 127 EIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E GH+LGL H +P Y Y ++ +
Sbjct: 212 EFGHSLGLDHSRDPRALMFPSYR----------------YMNTRNFRLPQ---------- 245
Query: 186 SDIVAVQKIYGAPKG 200
D+ +Q IYG G
Sbjct: 246 DDVNGIQSIYGRKTG 260
>gi|255262433|ref|ZP_05341775.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
gi|255104768|gb|EET47442.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
Length = 510
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 8/179 (4%)
Query: 199 KGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESW 250
+ ++ I+ + QTIY GGDD+++ GG +
Sbjct: 197 MVTATDDAEYIHGFKFGTGPDQSSQTIYAGGGDDVVNARSGNDIVYGGTGDDALGGGTGR 256
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + + T + + G +GND++ G S N+V SG D+ G SG D F +
Sbjct: 257 DTLFGEAGDDALFGGTEEDILHGGAGNDLLNGASDNDVLDGGSGADMMIGGSGQDVFQFG 316
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A + + + DF+ + + F +
Sbjct: 317 ADDLILWSETEGTKLERMGELDVVMDFVIGEDLIHFDASSGVTGFSDLAIWKAVIDGNS 375
>gi|126327132|ref|XP_001366571.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 246
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 66/188 (35%), Gaps = 46/188 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + + Y+ T+ + + +L ALG+WS+V LTF++ I +DI+
Sbjct: 89 WPSNVVTYRIVSYTSDLPRYKVDQL-------VEQALGKWSEVSALTFKKVLIGDADIRI 141
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + + +FD + W G G A HE+
Sbjct: 142 GFARGAHGDFYPFDGPGGILAHAFEPGIGIGGDAHFDNDEQWSDGSQLGVNFLFAATHEL 201
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H N VM DAS DI
Sbjct: 202 GHSLGLGHSSDPNA-------------------VM------YPTYDASNSGDINLSEDDI 236
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 237 KGIQALYG 244
>gi|261249969|ref|NP_001159701.1| interstitial collagenase [Sus scrofa]
gi|116854|sp|P21692|MMP1_PIG RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Contains: RecName:
Full=18 kDa interstitial collagenase; Flags: Precursor
gi|199652431|gb|ACH91675.1| matrix metallopeptidase 1 [Sus scrofa]
Length = 469
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 67/197 (34%), Gaps = 30/197 (15%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A+ +L W N + Y+ + T D+ A WS V
Sbjct: 94 VPDVAEFVLTPGNPRWENTHLTYRIENYTPDLSREDV-------DRAIEKAFQLWSNVSP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG---GYPVYGVDNDYENDSFLTSVMSYFMPQD 170
+ L A HE+GH+LGL H +Y D D + + + P +
Sbjct: 207 F-RDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDID-GIQAIYGPSE 264
Query: 171 SMMDASFGYCATPMVSD 187
+ + S TP V D
Sbjct: 265 NPVQPSG--PQTPQVCD 279
>gi|329903526|ref|ZP_08273539.1| putative hemolysin-adenlyate cyclase protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327548309|gb|EGF33000.1| putative hemolysin-adenlyate cyclase protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 1732
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 67/194 (34%), Gaps = 14/194 (7%)
Query: 202 LGNNIYKIEVQQKDSPFIQ--TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
LG+++ ++ ++ G D G +DL + +
Sbjct: 668 LGDDLKGMDGNDTLDGGADGDSLDGGNGIDTATYAS-SGAGVTVDLRLAGTTQTATGDTL 726
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I IE++ GS+ ND++IG+S NNV SGND G+ G DT A
Sbjct: 727 GDIL--VSIENLTGSAYNDILIGDSGNNVLTGGSGNDTLTGNGGNDTLDGGAGIDTASYT 784
Query: 320 RFENAIIVY--------DANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTASYED 370
+ V + + D L+ +E + + + ++L A +
Sbjct: 785 ASAQGVTVDLTLLTPQVSSGDASGDVLTGIENVFGSATGSNLLTGDGAANLLVGGAGNDT 844
Query: 371 LIQVIGQDVFESMK 384
+ G D +
Sbjct: 845 INGGGGDDTINAGA 858
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 13/168 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ G+D + ++L + + GG + IE+++GS ND++
Sbjct: 169 LIGGSGNDTVTY-GSSSAGVSVNLAVLTGQTSGGDANGDVLGG---IENLIGSGFNDLLT 224
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------ 335
G++ +N +G+DV +G +G DT A S + + + A
Sbjct: 225 GDTGDNRLDGGAGDDVLEGGAGADTLIGGANSAVGDTASYAGSASAITAYLDASGINTGD 284
Query: 336 ---DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D S +E L + + L+ A + LI G DV
Sbjct: 285 AFGDTYSGIENLTGSGYADTLTGDTGNNRLDGGAGDDVLIGGRGADVL 332
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 15/178 (8%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + + +S+ + + +++ G +GND + G N+ F
Sbjct: 1424 FVGSNYADTFVLADAGTVTSVDAGSGDDIVTGSIQNDTLRGGTGNDTLSGGGGNDALFGQ 1483
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYR---------FENAIIVYDANEH---KQDFLSD 340
+GND+ DG +G D YY + V D+ D L++
Sbjct: 1484 AGNDIIDGGAGTDVAQYYQSFDPTSSGAIANFRFADLGNGWLQVTDSRSGSPAGTDQLTN 1543
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD---VFESMKHFYEFGLSEGR 395
VE + F+D ++ + + D++ D + G
Sbjct: 1544 VESMLFSDGSVNLLQGTAGNDTLTGTVGRDVLLGGAGDDTLTGGGAADWLFGGAGNDT 1601
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 9/161 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ G D + L ++L S + IE++ GS
Sbjct: 325 GGRGADVLIGGAGIDTISY-LGSVSGVTVNLANGVGSGGEAQGDTFS-----GIENITGS 378
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ +D + G+ +N+ G D DG +G+DT Y + I + DA
Sbjct: 379 NYDDTLTGDGGDNLLIGGIGADTLDGGTGIDTADYSSSGAGISINLNGGSGAGGDAQG-- 436
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D L+++E + V ++L A + +
Sbjct: 437 -DTLANIENVTGTAYNDVFVASSAANVLRGGAGIDTVSYAA 476
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 20/195 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-TV 267
+ S G+D + I+L+T++ + + G +T +
Sbjct: 583 FDDVMVASAVANNFVGGLGNDTISYA-TSSRSVTINLDTQTVTGVTGGAIYLTDGDTFSG 641
Query: 268 IESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGS---------SGLDTFFY 309
+E+ +G +GND + G+S +N GND DG +G+DT Y
Sbjct: 642 VENAIGGNGNDKLTGSSGDNFLSGGLLGDDLKGMDGNDTLDGGADGDSLDGGNGIDTATY 701
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + D L +E L + + ++L + +
Sbjct: 702 ASSGAGVTVDLRLAGTTQTATGDTLGDILVSIENLTGSAYNDILIGDSGNNVLTGGSGND 761
Query: 370 DLIQVIGQDVFESMK 384
L G D +
Sbjct: 762 TLTGNGGNDTLDGGA 776
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 9/148 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGSSGNDVVI 281
GG D+LD Y ++ + A+ +E+++GSS +D++
Sbjct: 5 GGGADVLDGGAGIDTLGYAGSQEGVSVNLAAGLASGGDAEGDTFVNVENILGSSFDDILT 64
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------ 335
G++ +N+ SGND G +G D A S + V A
Sbjct: 65 GDTGDNLLSGGSGNDHLSGGAGADILNGGAGSDWADYTASAAGVSVNLATSGMAGGDAAG 124
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILE 363
D L +E L ++ + L
Sbjct: 125 DTLISIENLGGSNSGDILTGDAGNNQLS 152
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 9/181 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ G D T +DL + G + T IE
Sbjct: 760 NDTLTGNGGNDTLDGGAGIDTASYT-ASAQGVTVDLTLLTPQVSSGDASGDVL---TGIE 815
Query: 270 SVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+V GS+ G++++ G+ A N+ +GND +G G DT A + N +
Sbjct: 816 NVFGSATGSNLLTGDGAANLLVGGAGNDTINGGGGDDTINAGAGIDVLDGGSGNNTLSYA 875
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ ++ F++ + YTA + I + F
Sbjct: 876 SYDTAANLVING----DFSNGGTGWTVAGASPVPVYTAGNASVTAGINFLRSTASSPFVV 931
Query: 389 F 389
Sbjct: 932 G 932
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 263 AQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI- 318
A V+ E ++GS+ D + G++ NNV G D DG +G DT Y A S +
Sbjct: 1107 AYGDVLSGFEKLIGSAYADTLTGDAGNNVLVGLGGADRLDGGAGTDTADYSASSAGVTVN 1166
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+A + DFL+++E + + +++ + + + +D+I G
Sbjct: 1167 LSLSSATAQTSTGDASGDFLANIENVTGSATQANTLTGDANANVLTGGTGDDVISGGGSS 1226
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 7/134 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + G D L GV + L T S+ N++
Sbjct: 1287 FDDMITGTASGNVLDGGAGTDTLSYAASAAGVTVNLSLTTGQVSAGDASGDNLSN----- 1341
Query: 268 IESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+V+GS+ + + G++ NV +G D F G +G+D+F I
Sbjct: 1342 IENVIGSATQGNTLTGDANANVLTGGAGADTFTGGAGVDSFVGGGGIDTVSYVDASAGIT 1401
Query: 327 VYDANEHKQDFLSD 340
+ + +
Sbjct: 1402 INLITSVQTGAAAG 1415
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 6/155 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ---HTVIESVV-GSSGNDVV 280
+G L L+ + D + + ++I + T A +V+ G +G+DV+
Sbjct: 1161 AGVTVNLSLSSATAQTSTGDASGDFLANIENVTGSATQANTLTGDANANVLTGGTGDDVI 1220
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G +++ +G D DG +G DT Y S + I + D LS+
Sbjct: 1221 SGGGSSDTLIGGAGADTLDGGNGSDTVSYAGSSAGVTVNLAIQTQI--STGDASGDKLSN 1278
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+E L + ++L+ A + L
Sbjct: 1279 IENLIGSAFDDMITGTASGNVLDGGAGTDTLSYAA 1313
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 59/167 (35%), Gaps = 16/167 (9%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T+ G D D + G I+LN S GG + T+A IE+V G++ N
Sbjct: 398 GADTLDGGTGIDTADYSS-SGAGISINLNGG--SGAGGDAQGDTLAN---IENVTGTAYN 451
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV + +SA NV +G D YA S L + D
Sbjct: 452 DVFVASSAANVLRGGAGIDTVS----------YAASALGVTVDLTRTTAQISTGDAAGDV 501
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
LS +E L + +I+ A + LI G + +
Sbjct: 502 LSGIENLIGSAFADKLTGDGNDNIIAGLAGADILIGGGGINTLDYSA 548
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 19/186 (10%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+++ T+ G D + ++L ++ S G
Sbjct: 1212 TGGTGDDVISGGGSSDTLIGGAGADTLDGGNGSDTVSYAG-SSAGVTVNLAIQTQISTGD 1270
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + IE+++GS+ +D++ G ++ NV DG +G DT Y A +
Sbjct: 1271 ASGDKL----SNIENLIGSAFDDMITGTASGNVL---------DGGAGTDTLSYAASAAG 1317
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ V + D LS++E + A Q ++L A +
Sbjct: 1318 VTVNLSLTTGQVSAGDASG-DNLSNIENVIGSATQGNTLTGDANANVLTGGAGADTFTGG 1376
Query: 375 IGQDVF 380
G D F
Sbjct: 1377 AGVDSF 1382
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 52/163 (31%), Gaps = 6/163 (3%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A ++ Y + + G D + T + S G
Sbjct: 440 ANIENVTGTAYNDVFVASSA--ANVLRGGAGIDTVSYAASALGVTVDLTRTTAQISTGDA 497
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ + IE+++GS+ D + G+ +N+ +G D+ G G++T Y A S
Sbjct: 498 AGDVL----SGIENLIGSAFADKLTGDGNDNIIAGLAGADILIGGGGINTLDYSASSAGV 553
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
I DA +V F D + S
Sbjct: 554 TINLQSMTATGGDATGDVISGFQNVIGSAFDDVMVASAVANNF 596
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 23/195 (11%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G +G D + + + I+L S +++GG
Sbjct: 977 TGDGGTTIGFNAANGTY--------TGTIDNI-VIVAAQTGVTINLGP-SRTAMGGDATG 1026
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFFYY 310
+ + ++V G++GNDV+ G+S N+ G+D+ G +G DT Y
Sbjct: 1027 DSFSN---FQNVTGTNGNDVLTGDSGVNILTGGYGDDLITGGAGGDILSGGGGFDTVSYA 1083
Query: 311 APSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + ++ D LS E+L + ++L +
Sbjct: 1084 GSAAAVTVNLALMTAQTGSISDEAYGDVLSGFEKLIGSAYADTLTGDAGNNVLVGLGGAD 1143
Query: 370 DLIQVIGQDVFESMK 384
L G D +
Sbjct: 1144 RLDGGAGTDTADYSA 1158
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 20/122 (16%)
Query: 237 GGVKNYIDLNTESWSS-----IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
G ++ + +S + G N T+ + ++G +G+D + G A + F
Sbjct: 1536 AGTDQLTNVESMLFSDGSVNLLQGTAGNDTLTGTVGRDVLLGGAGDDTLTGGGAADWLFG 1595
Query: 292 SSGNDVF-----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+GND DG G D + + + +A+I +N D +
Sbjct: 1596 GAGNDTLVATDATNLAQADGGGGTDILKLTGTASGFNL----DALIASTSNIETVDLRNS 1651
Query: 341 VE 342
+
Sbjct: 1652 IN 1653
Score = 44.7 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 12/169 (7%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ GG + LD + I+L + + GG I + ++V+GS+
Sbjct: 530 AGADILIGGGGINTLDYS-ASSAGVTINLQSMTA--TGGDATGDVI---SGFQNVIGSAF 583
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+DV++ ++ N F GND ++ AI + D D
Sbjct: 584 DDVMVASAVANNFVGGLGNDTISYATSS-RSVTINLDTQTVTGVTGGAIYLTDG-----D 637
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
S VE + + L +DL + G D +
Sbjct: 638 TFSGVENAIGGNGNDKLTGSSGDNFLSGGLLGDDLKGMDGNDTLDGGAD 686
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ G DV DG +G+DT Y + DA D +VE + +
Sbjct: 1 MLEGGGGADVLDGGAGIDTLGYAGSQEGVSVNLAAGLASGGDAEG---DTFVNVENILGS 57
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++L + + L G D+
Sbjct: 58 SFDDILTGDTGDNLLSGGSGNDHLSGGAGADILNGGA 94
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 19/192 (9%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+N+ + G D D T + +
Sbjct: 64 TGDTGDNLLSGGSGNDHLSGGAGADILNGGAGSDWADYTASAAGVSVNLATSGMAGGDAA 123
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---------ESSGNDVFDGSSGLDT 306
+ ++I E++ GS+ D++ G++ NN +G DV G SG DT
Sbjct: 124 GDTLISI------ENLGGSNSGDILTGDAGNNQLSGLGGDDLLDGGAGADVLIGGSGNDT 177
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y + S + + + D L +E L + + L+ A
Sbjct: 178 VTYGSSSAGVSVNLAVLTGQTSGGDANG-DVLGGIENLIGSGFNDLLTGDTGDNRLDGGA 236
Query: 367 SYEDLIQVIGQD 378
+ L G D
Sbjct: 237 GDDVLEGGAGAD 248
>gi|301610869|ref|XP_002934968.1| PREDICTED: matrix metalloproteinase-18-like [Xenopus (Silurana)
tropicalis]
Length = 466
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 58/192 (30%), Gaps = 49/192 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T ++ + A WS V LTF +DI
Sbjct: 108 WKKKDLTYRILNYTPDMPKDEV-------DRAIQKAFKVWSDVTPLTFTRILDGVADIDI 160
Query: 82 ISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D Y + +FD+ + W G G L A HE
Sbjct: 161 SFAAQVHNDFYPFDGPYGTLAHAFAPGNNIGGDAHFDEDENWTSG-SVGFNLFLVAAHEF 219
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H N YP Y Y + D
Sbjct: 220 GHSLGLYHSNDPNALMYPTYH----------------YVDTNTYQLPQ----------DD 253
Query: 188 IVAVQKIYGAPK 199
I +Q +YGA +
Sbjct: 254 INGIQSLYGASE 265
>gi|302342424|ref|YP_003806953.1| glycosyl transferase group 1 [Desulfarculus baarsii DSM 2075]
gi|301639037|gb|ADK84359.1| glycosyl transferase group 1 [Desulfarculus baarsii DSM 2075]
Length = 609
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 80/229 (34%), Gaps = 32/229 (13%)
Query: 399 FDSYLY-LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
F Y L + D ++ A RH++ G K + F A Y D
Sbjct: 2 FIPQYYKLQAGLD--QAVTDEQ--AWRHWLLAGHKREIALNPLFDAEYYRQVWADKEPRI 57
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
A P H+ G +E T FD YL +Y D+ + H+I G
Sbjct: 58 ASEP----SAFMHWLKHGLQERIIPTVLFDEKFYLHAYPDVVACG----MWSFEHFIRFG 109
Query: 515 VKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG---YEEGRSITFNPD 570
V E R P+ F + Y+ + D +N A HF +G G + F+P
Sbjct: 110 VNERRWPNGLFSSGRYMEKNNDNLNGLAP--------YYHFLMYGDDCGFNGDTHNFDPR 161
Query: 571 LY-LTSYDDLWNVFGSDRSAAAQHYITHG-MKE--GRALGISGMQFKSV 615
+ + S+ DL+ + I G + E RA I + K
Sbjct: 162 EFGMPSWRDLYRLAVDKNREFFDDRIQCGVLAEVLERAARIEPLINKPA 210
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 46/136 (33%), Gaps = 16/136 (11%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
A + Y + D I + M H+ + GL E T F
Sbjct: 24 RHWLLAGHKREIALNPLFDAEYYRQVWADKEPRIASEPSAFM-HWLKHGLQERIIPTVLF 82
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFAD 458
D YL +Y D+ + H+I GV E R P+ F + Y+ + D +N A
Sbjct: 83 DEKFYLHAYPDVVAC----GMWSFEHFIRFGVNERRWPNGLFSSGRYMEKNNDNLNGLAP 138
Query: 459 APDLVQVGKDHFSNFG 474
HF +G
Sbjct: 139 YY--------HFLMYG 146
>gi|296216047|ref|XP_002754396.1| PREDICTED: stromelysin-2 [Callithrix jacchus]
Length = 477
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 63/195 (32%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ TT + AL W +V LTF
Sbjct: 109 WRKTHLTYRIMKYTTDLPRNAV-------DSAIEKALKVWEEVTPLTFSRLYEGEADILI 161
Query: 73 ---TSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D + GY Y ++ +I+FD + W GT L A HE
Sbjct: 162 SFVVKEHGDF-YSFDGPGYSLAHAYPPGPGFYGDIHFDDDENWTEDT-SGTNLFLVAAHE 219
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+GH+LGL H + +PVY +S D +
Sbjct: 220 LGHSLGLFHSANPEALMHPVY----------------------NSFTDLT---PFRLSQD 254
Query: 187 DIVAVQKIYGAPKGS 201
D+ +Q +YG P+ S
Sbjct: 255 DVNGIQSLYGLPRAS 269
>gi|85704230|ref|ZP_01035333.1| VCBS [Roseovarius sp. 217]
gi|85671550|gb|EAQ26408.1| VCBS [Roseovarius sp. 217]
Length = 4874
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 215 DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G+D + DL G + I T ++ G N I
Sbjct: 4681 GGAGNDTLDGGDGNDSISGSFGNDLINAGAGDDQIGGGTGRD-TLDGGAGNDRIGGGEGD 4739
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA--II 326
+ + G SGND + G N+V +GND +G +G D A S + F + +
Sbjct: 4740 DDISGGSGNDFLAGGGRNDVIDGGTGNDTINGGTGNDIMTGGADSDQFVFSSFVDGEFDV 4799
Query: 327 VYDANEHKQDFLSDV 341
+ D + FL +
Sbjct: 4800 ITDFTDGTDSFLIRI 4814
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LD + + +N S +++IA + V E V + ND +IGN +++
Sbjct: 4531 LDFETNALLDVSVTVNDASVGVNPDATASLSIAVNDVEEGPVATGENDTLIGNDGDDLIG 4590
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND G G D+ F A + + + A D +S
Sbjct: 4591 GLDGNDSISGGLGSDSLFGEAGADTLSGGEGNDTV----AGGDGDDLVSG 4636
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 40/210 (19%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ + GDDL+ + ++ GG+ + ++ G E N T+A + V G
Sbjct: 4578 DTLIGNDGDDLIGGLDGNDSISGGLGSDSLFGEAGADTLSGGEGNDTVAGGDGDDLVSGD 4637
Query: 275 SGND---------------------------VVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+GND + G + +V +GND DG G D+
Sbjct: 4638 AGNDSLGGGFGNDTLDGGDGDDTMGGGVGDDSLSGGNGADVVAGGAGNDTLDGGDGNDSI 4697
Query: 308 FYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDVE---RLRFADQCIDSVNVKQR 359
+ L ++ I + D + E + +
Sbjct: 4698 SGSFGNDLINAGAGDDQIGGGTGRDTLDGGAGNDRIGGGEGDDDISGGSGNDFLAGGGRN 4757
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+++ + + G D+ +F
Sbjct: 4758 DVIDGGTGNDTINGGTGNDIMTGGADSDQF 4787
>gi|262276071|ref|ZP_06053880.1| type I secretion target repeat protein [Grimontia hollisae CIP
101886]
gi|262219879|gb|EEY71195.1| type I secretion target repeat protein [Grimontia hollisae CIP
101886]
Length = 715
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E N TI T +++ G +GNDV++GN+ +++ + G+D+ G SG D + A
Sbjct: 450 IEGNEGNDTIRGGTGNDTIYGGAGNDVLLGNAGDDILYGGEGDDILRGGSGSDLLYGGAG 509
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + ++ + + L F + +N Y
Sbjct: 510 NDYLQAGYDDDYSLDGGTGLDLYRGSEGNDTLYFDQEDFSDLNFLNEHGNIYLGD 564
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 10/167 (5%)
Query: 194 IYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+YG G+ + IY + + + TI G+D + GG N + L
Sbjct: 432 LYG---GAGDDTIYGEQGDDYIEGNEGNDTIRGGTGNDTI----YGGAGNDVLLGNAGDD 484
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN-VFFESSGNDVFDGSSGLDTFFYY 310
+ G E + + + + + G +GND + ++ +G D++ GS G DT ++
Sbjct: 485 ILYGGEGDDILRGGSGSDLLYGGAGNDYLQAGYDDDYSLDGGTGLDLYRGSEGNDTLYFD 544
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + E+ I Q + + F +
Sbjct: 545 QEDFSDLNFLNEHGNIYLGDRGFDQLIVDGDTNVDFTGASYGYTSGP 591
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 248 ESWSSIGGYEKNMTIAQHT---VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S G N+ + Q + V +++ G G+D + G + N+ F +GND GS G
Sbjct: 176 GASDSYGALIDNVVLTQSSGADVNDTINGFEGDDFIDGLTGNDTLFGGNGNDEVYGSEGN 235
Query: 305 DTFFYYAPSYL 315
D + +
Sbjct: 236 DVIYGNDGFEV 246
>gi|321461202|gb|EFX72236.1| hypothetical protein DAPPUDRAFT_326457 [Daphnia pulex]
Length = 634
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 52/156 (33%), Gaps = 32/156 (20%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W+ I Y + + T + A WS L F + + +DI
Sbjct: 219 WNKRRITYFLANWSPKIGDEETT------IQQLERAFKVWSDYAHLKFVQVPTPDADITI 272
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNA 124
+ + P + +++FD+ + W G G A
Sbjct: 273 LFGRGYHGDRYPFDGVGYTLAHAYYPYEFDNFGGDVHFDEDEPWAVNPDEGSGIDFFTVA 332
Query: 125 LHEIGHALGLMH---PGS-----YNGGYPVYGVDND 152
HE+GH+LGL H PGS Y G P +D D
Sbjct: 333 THELGHSLGLAHSPVPGSVMFPYYKGSQPNLQLDYD 368
>gi|47215834|emb|CAG00689.1| unnamed protein product [Tetraodon nigroviridis]
Length = 618
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 60/209 (28%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L WS + Y T ++ E R A W V LTF+E
Sbjct: 77 YALTGHKWSKNRLTYSIQNYTPKIGEYNSYE-------AIRRAFKVWEGVTPLTFDEIPY 129
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRY-FMEINFDKADVWRYG 113
H D G++ + + +FD + W G
Sbjct: 130 QEIKYGRRKEPDIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGMGGDTHFDSDEPWTIG 189
Query: 114 IGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + +M D+
Sbjct: 190 NQNIQGNDLFLVAVHELGHALGLEHSNNPLAIMAPFYQ----------------WMETDN 233
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D +Q+IYG P
Sbjct: 234 FQLPD---------DDRRGIQQIYGQPNS 253
>gi|68137220|gb|AAY85550.1| matrix metalloproteinase [Chlamys farreri]
Length = 541
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 62/194 (31%), Gaps = 44/194 (22%)
Query: 25 NYFIRYKPDVLTTHRLSFDITEL--NPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
N ++ LT L + + + R A W+ LTF E + +DI+
Sbjct: 129 NARSGWRRTDLTWQLLGSTRSSRIPSTVVRSEIRRAFALWAAETPLTFREVTRSADIEID 188
Query: 83 SSNNGYVCTPRYDSRY----------FMEINFDKADVW--RYGIGKGTILSHNALHEIGH 130
+ + +D +FD + W G+G A HE GH
Sbjct: 189 FNTGSHGDGSPFDGPSGVLAHAFFPELGTTHFDDQEQWTTNSTTGRGIDPFIVAAHEFGH 248
Query: 131 ALGLMHPGSYNG-GYPVY-GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
ALGL H N +P Y G D++ ++ DI
Sbjct: 249 ALGLDHSNVRNALMFPTYLGYIPDFKLNN----------------------------DDI 280
Query: 189 VAVQKIYGAPKGSL 202
++ IYG P
Sbjct: 281 RGIRSIYGGPPTPR 294
>gi|75906806|ref|YP_321102.1| putative Ig [Anabaena variabilis ATCC 29413]
gi|75700531|gb|ABA20207.1| putative Ig [Anabaena variabilis ATCC 29413]
Length = 1055
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 61/200 (30%), Gaps = 27/200 (13%)
Query: 210 EVQQKDSPFIQTIYDSGGDDL----LDLTLIGGVKNYI-----------DLNT-ESWSSI 253
TI GG + DL+ + I DL + +
Sbjct: 694 NDILNGGNGQDTIIIQGGINTDTISFDLSNVNNQLASILGTTITNVETFDLRSFAGTVTF 753
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N + +++ G +G+D + G + ++ GND+ G SG +T A +
Sbjct: 754 TGGSGNDVVYGGVGNDTLTGGAGDDNLNGGAGDDTLIGGDGNDILTGGSGTNTLTGGAGN 813
Query: 314 YLYKIYRFENAIIVYDANEHKQD---------FLSDVERLRFADQCIDSVNVKQRSILEY 364
Y I + ++ + QD ++VE L I + +
Sbjct: 814 DRYYID--NASDVIQEGAGAGQDEVFATVSYTLAANVEALTLRGTAIQGTGNSSNNNIRG 871
Query: 365 TASYEDLIQVIGQDVFESMK 384
+ L G D
Sbjct: 872 NNANNILSGEDGNDNLTGNA 891
>gi|71896449|ref|NP_001025502.1| stromelysin-1 [Xenopus (Silurana) tropicalis]
gi|89267895|emb|CAJ83343.1| matrix metalloproteinase 3 (stromelysin 1, progelatinase) [Xenopus
(Silurana) tropicalis]
Length = 497
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 60/189 (31%), Gaps = 46/189 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKF 81
W + Y+ T +E++ A WS V L F++ S +DI
Sbjct: 129 WGKTTVTYRILNYT---PDITKSEVDY----AIAQAFRVWSDVTPLNFQKLNSGDADIMI 181
Query: 82 ISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + + +FD+ + W G G L H A HE
Sbjct: 182 SFNTRAHGDFDSFDGPNGVLAHAYAPSDGIGGDAHFDEDEQWTLGP-TGANLFHVAAHEF 240
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LG+ H N YP + + S D
Sbjct: 241 GHSLGMSHSTDTNALMYPTVSFGVTIDPAQYKLS-----------------------ADD 277
Query: 188 IVAVQKIYG 196
I +Q +YG
Sbjct: 278 IAGIQTLYG 286
>gi|296114326|ref|ZP_06832980.1| hypothetical protein GXY_01048 [Gluconacetobacter hansenii ATCC
23769]
gi|295979087|gb|EFG85811.1| hypothetical protein GXY_01048 [Gluconacetobacter hansenii ATCC
23769]
Length = 142
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 395 RDITFDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNP--DAFKALEYIASHED 451
+ + FD YL + D+ V + + H++ G EGR+ + F Y+ ++ D
Sbjct: 34 KSLPFDEQAYLQTNPDVDAAVHRGEIKSGHEHFLYTGFFEGRDTGGNEFDEKWYLKNNPD 93
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
++ + GK+H+ G E R +
Sbjct: 94 VVASVRRGD--WTTGKEHWQAVGRAELRAPS 122
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 479 RFVTFDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNP--DAFKALEYIASHED 535
+ + FD YL + D+ V + + H++ G EGR+ + F Y+ ++ D
Sbjct: 34 KSLPFDEQAYLQTNPDVDAAVHRGEIKSGHEHFLYTGFFEGRDTGGNEFDEKWYLKNNPD 93
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
++ + GK+H+ G E R+ +
Sbjct: 94 VVASVRRGD--WTTGKEHWQAVGRAELRAPSR 123
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT---FDSYLYLGSYDD- 494
F Y+ ++ D+ A ++ G +HF G EGR FD YL + D
Sbjct: 37 PFDEQAYLQTNPDVDAAVHRGE--IKSGHEHFLYTGFFEGRDTGGNEFDEKWYLKNNPDV 94
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ +V D H+ G E R P
Sbjct: 95 VASVRRGDWTTGKEHWQAVGRAELRAPSR 123
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMK-HFYEFGLSEGRDI---TFDSYLYLGSYDDLRNV 414
Y + D+ + + +S HF G EGRD FD YL + D+
Sbjct: 38 FDEQAYLQTNPDVDAAVHRGEIKSGHEHFLYTGFFEGRDTGGNEFDEKWYLKNNPDVVAS 97
Query: 415 F-GSDRGAAARHYITHGVKEGRNPD 438
D H+ G E R P
Sbjct: 98 VRRGDWTTGKEHWQAVGRAELRAPS 122
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT---FNPDLYLTSYDDL 579
F Y+ ++ D+ A +++G +HF G+ EGR F+ YL + D+
Sbjct: 37 PFDEQAYLQTNPDVDAAVHRGE--IKSGHEHFLYTGFFEGRDTGGNEFDEKWYLKNNPDV 94
Query: 580 WNVF-GSDRSAAAQHYITHGMKEGRALG 606
D + +H+ G E RA
Sbjct: 95 VASVRRGDWTTGKEHWQAVGRAELRAPS 122
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
S+ F+ YL + D+ +H++ G EGR G + +F L
Sbjct: 35 SLPFDEQAYLQTNPDVDAAVHRGEIKSGHEHFLYTGFFEGRDTGGN--EFDEKWYLKNN 91
>gi|238898312|ref|YP_002923993.1| putative RTX-family protein-14 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466071|gb|ACQ67845.1| putative RTX-family protein-14 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 1974
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Query: 226 GGDDLLDLTLIG--GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GGD L D TL G N D N++ ++ G E + TI + + G +G+D +
Sbjct: 1777 GGDVLADNTLDAKEGNDNIFD-NSDRLHTLRGGEGDDTIVAPKGNKKLFGGAGHDQLFSG 1835
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SD 340
++ GND G G DT+ + I + +D D
Sbjct: 1836 EGDDELNGGQGNDRLSGGKGDDTYVIHRQDDRTYIEDSGGTDEIVLMGMALKDLRVVKKD 1895
Query: 341 VERLRFA 347
+ F+
Sbjct: 1896 EDMYLFS 1902
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 8/128 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLL----DLTLIGGVKNYIDLNTESW 250
G+ + GN + P ++ ++ G G+DL+ DLT I+L
Sbjct: 1316 GSKHYTGGNQADVFYLFTATVPETRSYFNGGEGEDLIIAEHDLTGTPYQGYGINLQKNEV 1375
Query: 251 SSIGGYEKNM--TIAQHTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+N IA IE + G + D ++GN NN+ G D G G DT
Sbjct: 1376 RFRINQTENFWPLIANLKEIEHIHGHMTTRDYLVGNEKNNILNGLGGRDEIWGHGGNDTL 1435
Query: 308 FYYAPSYL 315
Sbjct: 1436 ILEQGIAS 1443
Score = 40.5 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 16/181 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ +D++ G+ +NV S GND G G D + + R + D E
Sbjct: 1626 TPFDDILNGDRQDNVLISSRGNDKLRGGKGQDIYQIQM-KDSAQTERTVSIDNKDDQAEL 1684
Query: 334 KQDFLS---DVERLRF--ADQCIDSVNVKQRSI---LEYTASYEDLIQVIGQDVFESMKH 385
+ D L +E L+ + Q + + ++ D + +
Sbjct: 1685 EVDLLMLPFKIEDLKIETSGQHVILSPSNEPQTNLRIKLLDFIRDKAYRHLMLMDVEQQL 1744
Query: 386 FYEFGLSEGRDITFDSYLYLGS--YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
F E R F ++ + D ++G D A T KEG + + F
Sbjct: 1745 FEISLNQENRPYFFHPQSHVNATENADFLRIYGGDVLAD----NTLDAKEGND-NIFDNS 1799
Query: 444 E 444
+
Sbjct: 1800 D 1800
>gi|163795539|ref|ZP_02189505.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
gi|159179138|gb|EDP63671.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
Length = 1188
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 57/196 (29%), Gaps = 18/196 (9%)
Query: 194 IYGAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
++G GS G+N+ T++ GDD L +G V
Sbjct: 387 LFGGYFGSTGSNVLDGGDGNDYLFGGDGANTLFGGAGDDTLLGGSVGNV----------- 435
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + N I + + + G +GND + G N+ + GND G G DT
Sbjct: 436 --LYGGDGNDNIYAASGNDVLYGGAGNDTLTGGDGNDNLYGDEGNDTLYGGGGDDTLVGG 493
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + + + L L +
Sbjct: 494 FSGTGDDLLSGGDGNDLLIGGNGQNTLYGGAGNDTLIAGSLSDVLYGGDGDDQLFGSTGN 553
Query: 369 EDLIQVIGQDVFESMK 384
+ L GQD
Sbjct: 554 DVLSGGFGQDTLSGGA 569
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 60/173 (34%), Gaps = 21/173 (12%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ T+ + GDD L GG N + + G N + +++ G +G+
Sbjct: 868 GVDTLIGADGDDTL----YGGNGNDV---------LYGVTGNDVLYGGDGADNISGMAGD 914
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE----- 332
D + G + ++ +GNDV G G D A + + ++ D ++
Sbjct: 915 DTLYGGTGADILSGGAGNDVLSGGDGNDILVGVAGNNWLDGGEGIDTLVGADGDDTLFGG 974
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L V + + D + + + L + L G DV
Sbjct: 975 GGNDVLYGVTGNDVMYGGDGADNLLGMAGDDTLYGGTGADILSGGGGNDVLSG 1027
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 21/179 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I T+ + GDD L GG N + + G N + +
Sbjct: 950 NNWLDGGEGIDTLVGADGDDTL----FGGGGNDV---------LYGVTGNDVMYGGDGAD 996
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G +G+D + G + ++ GNDV G G D A + ++ D
Sbjct: 997 NLLGMAGDDTLYGGTGADILSGGGGNDVLSGGDGNDVLVGVAGDNWLDGGEGVDTLVGSD 1056
Query: 330 ANE-----HKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ D L V + L D + L + L+ G DVF
Sbjct: 1057 GDDTLFGGGGNDVLYGVTGNDVLYGGDGADLLSGMDGNDTLAGGTGADLLLGGAGNDVF 1115
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 31/234 (13%)
Query: 194 IYGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--------DLTLIGGVKNYI 243
+YG G + T+Y GGDD L D L GG N +
Sbjct: 454 LYGGAGNDTLTGGD---GNDNLYGDEGNDTLYGGGGDDTLVGGFSGTGDDLLSGGDGNDL 510
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ +++ G N T+ ++ + + G G+D + G++ N+V G D G +G
Sbjct: 511 LIGGNGQNTLYGGAGNDTLIAGSLSDVLYGGDGDDQLFGSTGNDVLSGGFGQDTLSGGAG 570
Query: 304 LDTFFYY----------------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
D + A + ++Y + A + + + +
Sbjct: 571 NDALYGGNGLNVLYGGAGNDSLYAGTMSDQLYGGDGADRFILSGQFVFGASHVIGDYAAS 630
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
I +IL ++ D + I + S + + G D+TF +
Sbjct: 631 QDTISLQGATSATILTASSLGSDALLGIDLNGDTSADLYLR--IVNGADLTFST 682
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 76/213 (35%), Gaps = 23/213 (10%)
Query: 194 IYGAPKGS-----LGNNI-YKIEVQQKDSPFI--QTIYDSGGDDLL-----DLTLIGGVK 240
+YG GN++ Y + S T+Y G D+L + L GG
Sbjct: 881 LYGGNGNDVLYGVTGNDVLYGGDGADNISGMAGDDTLYGGTGADILSGGAGNDVLSGGDG 940
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES-------- 292
N I + + + G E T+ +++ G GNDV+ G + N+V +
Sbjct: 941 NDILVGVAGNNWLDGGEGIDTLVGADGDDTLFGGGGNDVLYGVTGNDVMYGGDGADNLLG 1000
Query: 293 -SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G+D G +G D + + N ++V A ++ D V+ L +D
Sbjct: 1001 MAGDDTLYGGTGADILSGGGGNDVLSGGD-GNDVLVGVAGDNWLDGGEGVDTLVGSDGDD 1059
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+L + L G D+ M
Sbjct: 1060 TLFGGGGNDVLYGVTGNDVLYGGDGADLLSGMD 1092
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 1/123 (0%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I +V + + G+SG D++ ++ G+D+ G +G D A + +
Sbjct: 701 IVGTSVADLLFGTSGPDIISALDGDDTVVALGGDDLVFGGAGNDLLSGGAGNDVLSGGD- 759
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N ++V A + D V+ L AD +L + L G D
Sbjct: 760 GNDVLVGVAGSNLLDGGEGVDTLIGADGDDTLYGGNGNDVLYGVTGNDVLYGGDGADNIS 819
Query: 382 SMK 384
M
Sbjct: 820 GMA 822
>gi|242279544|ref|YP_002991673.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
gi|242122438|gb|ACS80134.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
Length = 736
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI+ + +VG SG+D + G + N+V SG DV G +G+D Y A S
Sbjct: 498 GNGGNDTISGGAGNDQLVGGSGDDTLDGGADNDVLLGGSGADVLKGGAGVDVADYSASSA 557
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ DA D LS++E ++ + +IL ++L+ +
Sbjct: 558 AVTVNLTAGTGTGGDAQG---DTLSEIESVQGSAFNDTIAGAANGNILYGGNGNDNLLGL 614
Query: 375 IGQDVFESMK 384
G D+
Sbjct: 615 GGDDILNGGA 624
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 17/154 (11%)
Query: 200 GSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----- 251
G G++ + G D+ D + ++L + +
Sbjct: 516 GGSGDDTLDGGADNDVLLGGSGADVLKGGAGVDVADYS-ASSAAVTVNLTAGTGTGGDAQ 574
Query: 252 --------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S+ G N TIA + G +GND ++G +++ +GND G SG
Sbjct: 575 GDTLSEIESVQGSAFNDTIAGAANGNILYGGNGNDNLLGLGGDDILNGGAGNDALYGGSG 634
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D A +Y + ++Y+ D
Sbjct: 635 TDHLLGGAGDDIYVFQKGNQNDVIYEDANGGNDT 668
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 62/201 (30%), Gaps = 30/201 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+Y GG+D+L L GG + I + I G + +
Sbjct: 136 NDYINGKTGNDTLYGDGGNDVLIGGAGADRLFGGAGDDILIADAQDKRIDGGAGHDVLVV 195
Query: 265 H---------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
IE G GND + G N+ + SGND +G G D A + +
Sbjct: 196 DGKMSDDAIIVGIEEFRGGDGNDTINGTVGNDTIYGGSGNDTINGGDGNDQLIGGAGADV 255
Query: 316 YKIYRF-----ENAIIVYDANEHKQDFLS-----------DVERLRFADQCIDSVNVKQR 359
K + + D LS +VE+ +D + +
Sbjct: 256 IKGGKGDDIIAADNDDTLVDGGEGTDSLSVSGSFNMVNTVNVEKAIGSDDANTIIGNAEN 315
Query: 360 SILEYTASYEDLIQVIGQDVF 380
+I+ + L G D
Sbjct: 316 NIIYGNGGNDTLEGGDGNDQL 336
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 58/152 (38%), Gaps = 16/152 (10%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
++ + I + +A T +E V G + D V+GN+ NN+ + + GND +G +G
Sbjct: 363 VDGGEGNDIAVVNGSFNMANTTSVEVVQGGTAADTVVGNAENNIIYGNGGNDTLEGGAGN 422
Query: 305 DTFFYYAPSYL------YKIYRFENAIIVYDANEHKQDFLSD----------VERLRFAD 348
D A + + ++ +N I+ D E + + VE++
Sbjct: 423 DQLIGGAGADILKGGAGDDVFSADNEDILVDGGEGTDSLVVNGSFDMANTTSVEKVFGGT 482
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V + +++ + + G D
Sbjct: 483 AADTVVGNAEDNMIWGNGGNDTISGGAGNDQL 514
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 1/117 (0%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +GND + G+ N+V +G D G +G D A +
Sbjct: 132 GGDGNDYINGKTGNDTLYGDGGNDVLIGGAGADRLFGGAGDDILIADAQDKRID-GGAGH 190
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++V D + +E R D + + + + G D
Sbjct: 191 DVLVVDGKMSDDAIIVGIEEFRGGDGNDTINGTVGNDTIYGGSGNDTINGGDGNDQL 247
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 62/218 (28%), Gaps = 24/218 (11%)
Query: 198 PKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----LNTESWS 251
+ IY + G D++ + + ++ +
Sbjct: 221 NGTVGNDTIYGGSGNDTINGGDGNDQLIGGAGADVIKGGKGDDIIAADNDDTLVDGGEGT 280
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + +E +GS + +IGN+ NN+ + + GND +G G D A
Sbjct: 281 DSLSVSGSFNMVNTVNVEKAIGSDDANTIIGNAENNIIYGNGGNDTLEGGDGNDQLIGGA 340
Query: 312 PSYLYK----------------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ + K + E I + VE ++ V
Sbjct: 341 GADVIKGGKGDDIIAADNDDTLVDGGEGNDIAVVNGSFNMANTTSVEVVQGGTAADTVVG 400
Query: 356 VKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGL 391
+ +I+ + L G D + + G
Sbjct: 401 NAENNIIYGNGGNDTLEGGAGNDQLIGGAGADILKGGA 438
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 9/124 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSG 303
+ G + N I T +++ G GNDV+IG + + F +G+D+ DG +G
Sbjct: 130 LHGGDGNDYINGKTGNDTLYGDGGNDVLIGGAGADRLFGGAGDDILIADAQDKRIDGGAG 189
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D I D N+ + + + + ++
Sbjct: 190 HDVLVVDGKMSDDAIIVGIEEFRGGDGNDTINGTVGNDTIYGGSGNDTINGGDGNDQLIG 249
Query: 364 YTAS 367
+
Sbjct: 250 GAGA 253
>gi|119492566|ref|ZP_01623784.1| alkaline phosphatase [Lyngbya sp. PCC 8106]
gi|119453035|gb|EAW34205.1| alkaline phosphatase [Lyngbya sp. PCC 8106]
Length = 2080
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 8/159 (5%)
Query: 201 SLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYE 257
+ +NIY Y G+D ++ GG+ + + S I G
Sbjct: 1886 NGDDNIYGGSEDDLILAGQGNDNCYGDAGND----SIFGGIGGTLPGDDSSDIDYIEGGN 1941
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N I +T ++++G +G+D++ +++ GND G G DT +
Sbjct: 1942 GNDIIFGNTGSDTILGGNGDDIIFAGKGDDLVSGGEGNDFITGDDGNDTLDGGNGRDRFL 2001
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
++ D E QD + L F I ++
Sbjct: 2002 FVEGSGTDLIADY-EDGQDLFVLGQGLTFDQLTISQISG 2039
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L T+ I G++ + +A +++ G S +D+++ N+ + +GND G G
Sbjct: 1865 LGTDEGEDIFGFQGSDLLAALNGDDNIYGGSEDDLILAGQGNDNCYGDAGNDSIFGGIGG 1924
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILE 363
T S + I I++ + + + FA + D V+ + + +
Sbjct: 1925 -TLPGDDSSDIDYIEGGNGNDIIFGNTGSDTILGGNGDDIIFAGKGDDLVSGGEGNDFIT 1983
Query: 364 YTASYEDLIQVIGQDVF 380
+ L G+D F
Sbjct: 1984 GDDGNDTLDGGNGRDRF 2000
>gi|291567202|dbj|BAI89474.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 377
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D L + + I L + +I G N TI + + G G+D++ GN N
Sbjct: 50 GNDYL----VNNEQGRILLGHQGNDTIIGNSGNDTIYGGQNDDYLEGGYGDDMLFGNRGN 105
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--------VYDANEHKQDFL 338
+ SGND G G D + + + R + + + ++ QD +
Sbjct: 106 DTLIGGSGNDTIYGGVGNDWIVGGSGNNVLSGDRGLDTLTGGSGVNQFILPSSTVNQDLI 165
Query: 339 SDV 341
+D
Sbjct: 166 TDF 168
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 19/136 (13%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI + G+D + G +Y + G + + + ++++G SGN
Sbjct: 68 GNDTIIGNSGNDTI---YGGQNDDY----------LEGGYGDDMLFGNRGNDTLIGGSGN 114
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G N+ SGN+V G GLDT + + + + DF
Sbjct: 115 DTIYGGVGNDWIVGGSGNNVLSGDRGLDTLTGGSGVNQFILPSS------TVNQDLITDF 168
Query: 338 LSDVERLRFADQCIDS 353
++++ D +
Sbjct: 169 KPGIDKMWVPDGVTIA 184
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 14/99 (14%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDT 306
+ N + + ++G GND +IGNS N+ + G+D+ G+ G DT
Sbjct: 48 LQGNDYLVNNEQGRILLGHQGNDTIIGNSGNDTIYGGQNDDYLEGGYGDDMLFGNRGNDT 107
Query: 307 FFYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSD 340
+ + + I+ N + D L+
Sbjct: 108 LIGGSGNDTIYGGVGNDWIVGGSGNNVLSGDRGLDTLTG 146
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
IA + +V + +++G+ N+ +SGND G D +
Sbjct: 44 AIALLQGNDYLVNNEQGRILLGHQGNDTIIGNSGNDTIYGGQNDDYLEGGYGDDML---- 99
Query: 321 FENAIIVYDANEHKQDFLSD 340
F N D +
Sbjct: 100 FGNRGNDTLIGGSGNDTIYG 119
>gi|15839348|ref|NP_300036.1| hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
gi|9108001|gb|AAF85544.1|AE004081_16 hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1296
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 2/148 (1%)
Query: 195 YG-APKGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
YG + + ++ N Y E + + F + +D ++ NY+ + +
Sbjct: 1061 YGTSDQLTISNYFYSAEYKVEQFTFSNGVTWDEAAIKARVISNGDASNNYLRGYKDGSNR 1120
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N I + + + G +GND++ G + SGND+ G +G DT+ +
Sbjct: 1121 IYGLDGNDEIYGGALDDMLDGGAGNDMLSGGGGADTLDGGSGNDMLYGGTGNDTYRFAIG 1180
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + +I ++ D Q +
Sbjct: 1181 AGVDRIEDYDTTTGNADVLSIGQGVSIN 1208
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 70/176 (39%), Gaps = 15/176 (8%)
Query: 195 YG-APKGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
YG + + ++ N Y E + + F + +D ++ NY+ + +
Sbjct: 899 YGTSDQLTISNYFYSAEYKVEQFTFSNGVTWDEAAIKARVISNGDANNNYLVGYNDGSNR 958
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N TI + + + G +GND++ G + SGND+ G +G DT+ +
Sbjct: 959 IYGLDGNDTIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDMLYGGTGNDTYRFAIG 1018
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + +I + + + +RFAD ++ +R + Y
Sbjct: 1019 AGVDRIEESDA-------------TAGNTDVVRFADVAFSALTALERKDSDLVIKY 1061
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 13/146 (8%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D ++ NY+ + + I G + N I + + + G +GND++ G
Sbjct: 767 WDDAAIKARVISNGDASNNYLRGYKDGSNRIYGLDGNDEIYGGALDDMLDGGAGNDMLSG 826
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ SGND+ G +G DT+ + + + +I + + +
Sbjct: 827 GKGADTLDGGSGNDMLYGGTGNDTYRFAIGAGVDRIEESDA-------------TAGNTD 873
Query: 343 RLRFADQCIDSVNVKQRSILEYTASY 368
+RFAD ++ +R + Y
Sbjct: 874 VVRFADVASSALTALERKDSDLVIKY 899
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G +M I + T + ++G GND + G S ++ +GND +G +G DT+ +
Sbjct: 633 LGTSGNDMIIGEVTGNDVLIGKGGNDTLQGGSGDDTLDGGTGNDTLNGGAGNDTYRFAIG 692
Query: 313 SYLYKIYRFENAIIVYDANEHKQ 335
+ + IY A D
Sbjct: 693 AGVDSIYEDVTATSDTDIVTFAD 715
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 14/130 (10%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN----------SANNVFFESSGNDVF 298
SW+ I I + ++G+SGND++IG N+ SG+D
Sbjct: 610 SWTVIFAAADRHFITGSARSDVLLGTSGNDMIIGEVTGNDVLIGKGGNDTLQGGSGDDTL 669
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DG +G DT A + Y+ +Y+ D + + FAD ++ +
Sbjct: 670 DGGTGNDTLNGGAGNDTYRFAIGAGVDSIYEDVTATSDT----DIVTFADVRSTALTALE 725
Query: 359 RSILEYTASY 368
R + Y
Sbjct: 726 RKDYDLVIKY 735
>gi|17558356|ref|NP_503790.1| hypothetical protein C31B8.8 [Caenorhabditis elegans]
gi|3152402|dbj|BAA28351.1| matrix metalloproteinase [Caenorhabditis elegans]
gi|14670221|gb|AAG23982.2| Hypothetical protein C31B8.8 [Caenorhabditis elegans]
Length = 579
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 63/205 (30%), Gaps = 50/205 (24%)
Query: 13 IADHLLRDQY---WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
L WS + Y + ++ D+ + A G WSKV L
Sbjct: 127 APLALTSGSSQFKWSKTRLTYSIESWSSDLSKDDV-------RRAISEAYGLWSKVTPLE 179
Query: 70 FEETSIHSD----IKFI---------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
F E S I+F G V M +FD + W Y +
Sbjct: 180 FSEVPAGSTSDIKIRFGVRNHNDPWPFDGEGGVLAHATMPESGM-FHFDDDENWTYKDAR 238
Query: 117 ------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
T L A+HE GH LGL H N +M+ F +
Sbjct: 239 KIHNNEATDLLAVAIHEGGHTLGLEHSRDENA-------------------IMAPFYQKT 279
Query: 171 SMMDASFGYCATPMVSDIVAVQKIY 195
+ ++ Y DI A+Q IY
Sbjct: 280 TDSSGNYVYPN-LKSDDISAIQAIY 303
>gi|170717778|ref|YP_001784843.1| hypothetical protein HSM_1523 [Haemophilus somnus 2336]
gi|168825907|gb|ACA31278.1| hypothetical protein HSM_1523 [Haemophilus somnus 2336]
Length = 170
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 52/157 (33%), Gaps = 13/157 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
YK + D G+ G S++GG E
Sbjct: 14 GTSYKGHSSSVAGHIFYVLVDEHGNRKSFGWGKGEN-----------STLGGIENITKTD 62
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
E+ G S +D++ G + G+D DG G D + YKI + +
Sbjct: 63 DIDYSETNFGGSDDDMLYGGDGADTLLGEGGDDYLDGGEGEDVAEFSGNFADYKITKMGD 122
Query: 324 AIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+++ D DFL ++E+L F D V V
Sbjct: 123 GLLISDTKQGRDGTDFLRNIEKLNFKDITNYQVPVTN 159
>gi|301773290|ref|XP_002922070.1| PREDICTED: interstitial collagenase-like [Ailuropoda melanoleuca]
Length = 469
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 71/210 (33%), Gaps = 55/210 (26%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A ++L D+ W + + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQYVLTDRTPRWEHTHLTYRIENYTPDLPRADV-------DSAIEQAFRLWSNVSP 146
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF + +DI +N P +++FD+ W
Sbjct: 147 LTFTKIFEGQADIMISFVWGDHGDNSPFGGPANTLAHAFLPGGGIGGDVHFDEEKRWTSD 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDS 171
+ L A HE+GH+LGL H D+ + S+M SY +D
Sbjct: 207 F-RNFNLYCIAAHEVGHSLGLGH-------------------DNDIGSLMFPSYNNYRDV 246
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++ DI A+Q +YG K
Sbjct: 247 LLSPR----------DISAIQALYGPSKNP 266
>gi|261380931|ref|ZP_05985504.1| putative iron-regulated protein FrpC [Neisseria subflava NJ9703]
gi|284796184|gb|EFC51531.1| putative iron-regulated protein FrpC [Neisseria subflava NJ9703]
Length = 822
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G N I + S + + G + N I +++ G SGND++ G N+ GND
Sbjct: 582 GADNIITITDSSHALVSGGDGNDRIRGGLGNDTINGDSGNDIIFGYDGNDRLNGGMGNDS 641
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G +G DT + + + D+L
Sbjct: 642 IHGGNGNDTLWGESGNDRL----NGGDGNDVLFGGQGTDYLVG 680
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 34/126 (26%), Gaps = 43/126 (34%)
Query: 199 KGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN+I Y + +I+ G+D L
Sbjct: 616 NGDSGNDIIFGYDGNDRLNGGMGNDSIHGGNGNDTL------------------------ 651
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G SGND + G N+V F G D G G DT+ +
Sbjct: 652 ----------------WGESGNDRLNGGDGNDVLFGGQGTDYLVGGKGADTYVFSLGEGK 695
Query: 316 YKIYRF 321
I
Sbjct: 696 DTITDN 701
>gi|114327407|ref|YP_744564.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114315581|gb|ABI61641.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 1211
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 12/93 (12%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
FD+ YL +Y DL S + HYI +G +E R+P F YI + D I+
Sbjct: 438 SPLFDARWYLDTYQDL----DSSKTDPVIHYILYGTQEERDPGPDFSTTFYIRRYPDSIS 493
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
A +H+ G E R + S+
Sbjct: 494 AGL-------TALEHYELHGRSEQRQIAPSSHA 519
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 12/88 (13%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD+ YL +Y DL S + HYI +G +E R+P F YI + D I+
Sbjct: 438 SPLFDARWYLDTYQDL----DSSKTDPVIHYILYGTQEERDPGPDFSTTFYIRRYPDSIS 493
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT 566
A +H+ G E R I
Sbjct: 494 AGL-------TALEHYELHGRSEQRQIA 514
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD--SYLYLGSYD 493
+ F A Y+ +++DL ++ D H+ +G +E R D + Y+ Y
Sbjct: 437 DSPLFDARWYLDTYQDLDSSKTDP-------VIHYILYGTQEERDPGPDFSTTFYIRRYP 489
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE-YIASHEDLINAFADAPDLVQ 548
D + A HY HG E R E + E +I + D
Sbjct: 490 DSISAG----LTALEHYELHGRSEQRQIAPSSHAEAPVKEPEPVIAEYDTEADNAS 541
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 43/173 (24%), Gaps = 33/173 (19%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLG 406
+ Y +Y+DL + + H+ +G E RD F + Y+
Sbjct: 431 AYRIIKDSPLFDARWYLDTYQDL----DSSKTDPVIHYILYGTQEERDPGPDFSTTFYIR 486
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------------FKALEYIASH 449
Y D + A HY HG E R + AS
Sbjct: 487 RYPDSISA----GLTALEHYELHGRSEQRQIAPSSHAEAPVKEPEPVIAEYDTEADNASE 542
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY-DDLRNVFGS 501
D + + + E + Y Y D G
Sbjct: 543 PDEV--IQPPVLTADDKRKPYVLCISGEPHTAG---HFYRVVYFADAIRAAGG 590
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 13/99 (13%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSY 576
++ F A Y+ +++DL ++ D H+ +G +E R F+ Y+ Y
Sbjct: 436 KDSPLFDARWYLDTYQDLDSSKTDP-------VIHYILYGTQEERDPGPDFSTTFYIRRY 488
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSV 615
D + A +HY HG E R + S V
Sbjct: 489 PDSISA----GLTALEHYELHGRSEQRQIAPSSHAEAPV 523
>gi|254510968|ref|ZP_05123035.1| hemolysin-type calcium-binding protein [Rhodobacteraceae bacterium
KLH11]
gi|221534679|gb|EEE37667.1| hemolysin-type calcium-binding protein [Rhodobacteraceae bacterium
KLH11]
Length = 4932
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 74/217 (34%), Gaps = 16/217 (7%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
SY + + ++ +V+++ + G+ + +Y + +
Sbjct: 2851 SYNDGRRTGVNVDLRTGENTDNDTLVSIENVVGSNAQ---DELYGDNLANVLTGLA---- 2903
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D++ G N I + + G E + ++ + + G +G+DV+ G
Sbjct: 2904 ---GNDVI----HGNDGNDILIGNSGADELVGGEGDDSLIGDDDNDILQGDAGDDVLAGG 2956
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD--FLSDV 341
++ NDV G G D E + V A D LS++
Sbjct: 2957 DGDDTLRGGDDNDVLVGGEGNDILIGGEGIDTASYADLETGVEVNLATGRGPDQETLSEI 3016
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E L + Q + +++ + L+ G D
Sbjct: 3017 ENLIGSQQDDTLTGDENNNLINGGLGADILVGGDGID 3053
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 57/164 (34%), Gaps = 1/164 (0%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ G D LD +Y D + +N IE+VVGS+ D +
Sbjct: 2832 LIGGTGVDTLDGGEDSDTVSYNDGRRTGVNVDLRTGENTDNDTLVSIENVVGSNAQDELY 2891
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G++ NV +GNDV G+ G D + + ++++I D N+ Q D
Sbjct: 2892 GDNLANVLTGLAGNDVIHGNDGNDILIGNSGADELVGGEGDDSLIGDDDNDILQGDAGD- 2950
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ L D +L + LI G D
Sbjct: 2951 DVLAGGDGDDTLRGGDDNDVLVGGEGNDILIGGEGIDTASYADL 2994
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 5/139 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ GGDD L L G + ID I G + I ++++G +GND +
Sbjct: 2093 IFGFGGDDTL---LGGEGDDTIDGGAGDD-YINGGTGDDYILGGDDNDTLIGGAGNDFID 2148
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + +++ + GND G G D + +N I+ D +
Sbjct: 2149 GGNGDDILLGNIGNDELFGGLGDDQLSGGRGADQLS-GGADNDILDGGIGNDILDGGTGD 2207
Query: 342 ERLRFADQCIDSVNVKQRS 360
+ L +
Sbjct: 2208 DLLILGTGNDIATGGTGSD 2226
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 11/186 (5%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES- 249
+Q+ LG+ I + + G++ + K D + S
Sbjct: 2501 LQRPETPEDTVLGDTI---NARAFTDGTALILVTEDGNEFYRFDVDELRKQQ-DASEASQ 2556
Query: 250 ----WSSIGGYEKNMTIAQHT--VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ AQ T IE V G SG+D++ G+ NN F +G+D +G G
Sbjct: 2557 AEITINDFYLLTIDVLNAQATFTGIEDVSGGSGDDILSGDDQNNALFGQAGDDRINGRDG 2616
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D E+ I + + D V+ + F + V I+
Sbjct: 2617 ADFISGGQGDDTIDAGDGEDLIALGAGGFDQVDGGEGVDTVSFLQESRVGVFASTSGIIR 2676
Query: 364 YTASYE 369
Sbjct: 2677 DFNLNP 2682
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 54/174 (31%), Gaps = 10/174 (5%)
Query: 198 PKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G+ + I+ TI GDD + D ++GG N L +
Sbjct: 2085 NGGAGDDEIFGFGGDDTLLGGEGDDTIDGGAGDDYINGGTGDDYILGGDDND-TLIGGAG 2143
Query: 251 SS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ I G + + + + + G G+D + G + + ND+ DG G D
Sbjct: 2144 NDFIDGGNGDDILLGNIGNDELFGGLGDDQLSGGRGADQLSGGADNDILDGGIGNDILDG 2203
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
L I N I + + + + D N + L
Sbjct: 2204 GTGDDLL-ILGTGNDIATGGTGSDRVQSILGINVIDGDDGGTSDPNDRDTLDLR 2256
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 57/165 (34%), Gaps = 16/165 (9%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ G D + + IDL S S E+V+GS G+
Sbjct: 3042 GADILVGGDGIDTVSFSDGRQTGLRIDLLDGSSSEGDQISG---------FENVLGSLGD 3092
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV++G+ NN+ G D FDG G DT Y + + N+ ++ D
Sbjct: 3093 DVIVGDDGNNLLIGGGGADRFDGGEGSDTVSYAEETASVSVNLAANS-------NNQNDD 3145
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L +E L + + L A + L + G DV
Sbjct: 3146 LIGIENLVGGSANDLLTGDDENNALTGGAGADVLRGLSGADVLSG 3190
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 59/200 (29%), Gaps = 42/200 (21%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+D G G D + + ++L S + IE++VG S ND++
Sbjct: 3113 FDGGEGSDTVSYAEETASVS-VNLAANSNNQNDDLIG---------IENLVGGSANDLLT 3162
Query: 282 GNSANNVFFESSGNDVFD---------------------------GSSGLDTFFYYAPSY 314
G+ NN +G DV G G D A S
Sbjct: 3163 GDDENNALTGGAGADVLRGLSGADVLSGGTGEDDLRGGEGDDLLVGGEGADRLDGGAGSD 3222
Query: 315 LYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
A+ + E D L +E + ++ D + L ++L
Sbjct: 3223 TASFVSETTAVTIDLTQEEASTGDILVSIENIEGTNEADDIRGDGGNNTLYGLDGDDNLF 3282
Query: 373 QVIGQDV--FESMKHFYEFG 390
G D + F + G
Sbjct: 3283 GRTGNDRLFGGDGEDFIDAG 3302
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 8/132 (6%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+++ G+D + G+ NN F +GND+ +G G D + + +
Sbjct: 4084 IEAIIAGDGDDTLRGDDGNNTFAGGAGNDLLEGRDGADLLLGNSGND----VLYGGLGDD 4139
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
E D L E D + ++ S + + +F + H
Sbjct: 4140 TLVAESGDDELHGGE----GDDTFIVQSTSGNVLISELFSDAENGAAANEIIFSDVDHRD 4195
Query: 388 EFGLSEGRDITF 399
+G D F
Sbjct: 4196 VDVRQDGDDAVF 4207
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 23/171 (13%)
Query: 225 SGGDDLL-----DLTLIGGVKNYI-----DLNTESWSSI-GGYEKNMTIAQH------TV 267
GDD L + L+GG N I ++T S++ + G E N+ + +
Sbjct: 2956 GDGDDTLRGGDDNDVLVGGEGNDILIGGEGIDTASYADLETGVEVNLATGRGPDQETLSE 3015
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+++GS +D + G+ NN+ G D+ G G+DT + + I +
Sbjct: 3016 IENLIGSQQDDTLTGDENNNLINGGLGADILVGGDGIDTVSFSDGR------QTGLRIDL 3069
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + + D +S E + + V ++L + G D
Sbjct: 3070 LDGSSSEGDQISGFENVLGSLGDDVIVGDDGNNLLIGGGGADRFDGGEGSD 3120
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 1/130 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I + + G G+D ++G ++ +G+D +G +G D +
Sbjct: 2075 LEGRNADDYINGGAGDDEIFGFGGDDTLLGGEGDDTIDGGAGDDYINGGTGDD-YILGGD 2133
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I N I + + L + L A + L
Sbjct: 2134 DNDTLIGGAGNDFIDGGNGDDILLGNIGNDELFGGLGDDQLSGGRGADQLSGGADNDILD 2193
Query: 373 QVIGQDVFES 382
IG D+ +
Sbjct: 2194 GGIGNDILDG 2203
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 53/180 (29%), Gaps = 26/180 (14%)
Query: 224 DSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G G D IDL E S+ I + + G GN+ + G
Sbjct: 3216 DGGAGSDTASFVSET-TAVTIDLTQEEASTGDILVSIENIEGTNEADDIRGDGGNNTLYG 3274
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE---------- 332
++ F +GND G G D F A I E+A ++
Sbjct: 3275 LDGDDNLFGRTGNDRLFGGDGED--FIDAGDGDDLISGGEDADVIRGGEGIDGVTYEVNS 3332
Query: 333 ------------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D LS +E + ++ ++L + L G DV
Sbjct: 3333 AGITADLDTGVVSDGDTLSSIENVIGSNFSDTISGTNDDNVLTGLDGNDVLDGRGGDDVL 3392
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 45/143 (31%), Gaps = 15/143 (10%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL+T S IE+V+GS+ +D + G + +NV GNDV DG G
Sbjct: 3338 DLDTGVVSDGDTLSS---------IENVIGSNFSDTISGTNDDNVLTGLDGNDVLDGRGG 3388
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSI 361
D + D L L AD D++ Q
Sbjct: 3389 DDVLRGNEGDDTLR----GGQGADVLIGGEGDDLLEGGSESDLLRADSGTDTLVGGQGDD 3444
Query: 362 LEYTASYEDLIQVIGQDVFESMK 384
+ S + D + +
Sbjct: 3445 VYVIGSNSVETVIRAGDGTDRLA 3467
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 60/209 (28%), Gaps = 29/209 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL---------TLIGGVKNYIDLN 246
G G+ ++ + + G D + G+ +LN
Sbjct: 2625 GDDTIDAGD---GEDLIALGAGGFDQVDGGEGVDTVSFLQESRVGVFASTSGIIRDFNLN 2681
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E+ + +E + I+ + G + + + G N+ F G+DV G +G D
Sbjct: 2682 PETGDRLSTFENIENLEGTDFIDRLTGDNEVNQLAGAGGNDDLFGEGGDDVLIGGAGADR 2741
Query: 307 FFYYAPSYLYK------IYRFENAIIVYDANEHKQ-----------DFLSDVERLRFADQ 349
S I + ++ D D+E L
Sbjct: 2742 LSGGLGSDTASYGDRVAILDADGNVVDDSRASGVTANLTTGFNTEGDIFEDIENLSGTAF 2801
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + + L +DL + G D
Sbjct: 2802 EDDLTGDGEANALSGGEGNDDLQGLAGND 2830
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D++ G N+V G+D+ +G G DT A + + R + ++ A+
Sbjct: 4515 GGEGDDLLRGREGNDVLEGGLGDDILEGGDGSDTLTADAGTDVLVGGRGADTYVISRASR 4574
Query: 333 HKQ 335
Q
Sbjct: 4575 DTQ 4577
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 11/139 (7%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L+ ++ ++ G + + I T I + + G + +D + G + ++ F G+D G G
Sbjct: 2048 LSEQAGTNPDGDDLRVAIIDSTSIGQRLEGRNADDYINGGAGDDEIFGFGGDDTLLGGEG 2107
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT A Y Y D L F D IL
Sbjct: 2108 DDTIDGGAGDD----YINGGTGDDYILGGDDNDTLIGGAGNDFIDGG------NGDDILL 2157
Query: 364 YTASYEDLIQVIGQDVFES 382
++L +G D
Sbjct: 2158 GNIGNDELFGGLGDDQLSG 2176
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 34/106 (32%), Gaps = 18/106 (16%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ-----HTVIESV 271
+ G D +D N I S S G ++ I T ++V
Sbjct: 4286 DGNDIVVGGDGSDTID--TGNASDNVIG-GGGSDSVTLGVGADVFIDAQDGQTETGRDTV 4342
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVF----------DGSSGLDTF 307
G GND ++ + F G+D+ +G G DT
Sbjct: 4343 YGGDGNDSILSVDGADELFGEDGDDLIVLNTLDFQRVEGGIGSDTL 4388
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 11/119 (9%)
Query: 236 IGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ G +DL S + I N TI + ++G GND + G++ ++ +
Sbjct: 4663 VSGRGGTVDLRLGSDAGEFIQADNGNNTINGLGGNDEILGLGGNDQLQGDNGADLLDGGA 4722
Query: 294 GND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G+D ++G D I R IV D + L +E+
Sbjct: 4723 GDDLLFGGDDDDRLIATAGTDIVDGERGDDTIVIGRDSRDTIVRDFQDQNTLVLDGIEQ 4781
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 7/193 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTV 267
Q S +GG D V I+ + S S+I G +++ I
Sbjct: 4221 FAAAQPTSGLFAAFQFAGGARFED--PASFVNQQINGQSGQSLSAISGTDQSDRIFAAES 4278
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ GND+V+G ++ + +D G G D+ + ++ I +
Sbjct: 4279 GSRITTLDGNDIVVGGDGSDTIDTGNASDNVIGGGGSDSVTLGVGADVF-IDAQDGQTET 4337
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ D + + AD+ + ++ + IG D +
Sbjct: 4338 GRDTVYGGDGNDSILSVDGADELFGEDGDDLIVLNTL--DFQRVEGGIGSDTLSLAELEQ 4395
Query: 388 EFGLSEGRDITFD 400
+ GR F
Sbjct: 4396 PTAYA-GRSDDFS 4407
>gi|119493848|ref|ZP_01624414.1| type I secretion target repeat protein [Lyngbya sp. PCC 8106]
gi|119452397|gb|EAW33587.1| type I secretion target repeat protein [Lyngbya sp. PCC 8106]
Length = 1518
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 52/149 (34%), Gaps = 14/149 (9%)
Query: 203 GNN-IY--KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
GN+ IY K TI+ G+D + +GG N L + + G E N
Sbjct: 1319 GNDLIYSGKDNDLASGEAGNDTIFGDLGNDTI----VGGEGNDFLLGNQGNDIVSGGEGN 1374
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY----- 314
IA + + G GND V G+ +V + + GND G DT
Sbjct: 1375 DFIAGGKGDDILFGDQGNDEVYGDLGADVVYGNQGNDSLYGGEDNDTLIGGEGDDFLSGD 1434
Query: 315 --LYKIYRFENAIIVYDANEHKQDFLSDV 341
++ E + I D + D
Sbjct: 1435 QGDDILFGGEGSDIFALLLNSGSDVIVDF 1463
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 61/177 (34%), Gaps = 20/177 (11%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ G+DLLD G + + N + S IGG E N I + G +GND + G+
Sbjct: 1289 DTDGEDLLDG---GEGDDTLSGNQGNDSLIGG-EGNDLIYSGKDNDLASGEAGNDTIFGD 1344
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N+ GND G+ G D + + + D +
Sbjct: 1345 LGNDTIVGGEGNDFLLGNQGNDIVSGGEGND----FIAGGKGDDILFGDQGNDEV----- 1395
Query: 344 LRFADQCIDSVNVKQRSILEY-TASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDI 397
+ D D V Q + Y + LI G D + G EG DI
Sbjct: 1396 --YGDLGADVVYGNQGNDSLYGGEDNDTLIGGEGDDFLSGDQGDDILFGG--EGSDI 1448
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 6/152 (3%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ ++ ++ G N I + E I G N I +++ G+ GND++ + N++
Sbjct: 1191 NAVETSIEGTEANDILIGVEISEQIVGLAGNDEINAFGGSDNLFGNIGNDILNAGNGNDI 1250
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRF 346
SG DV G G DT + + + + + +D L E
Sbjct: 1251 ADGGSGEDVLVGGFGSDTLIGGSENDSL----VGGSDNLVLPDTDGEDLLDGGEGDDTLS 1306
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Q DS+ + + L Y+ DL +
Sbjct: 1307 GNQGNDSLIGGEGNDLIYSGKDNDLASGEAGN 1338
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 17/150 (11%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY---- 316
+IA + V S+ G+ ND++IG + +GND + G D F + +
Sbjct: 1187 SIALNAVETSIEGTEANDILIGVEISEQIVGLAGNDEINAFGGSDNLFGNIGNDILNAGN 1246
Query: 317 --KIYRFENAIIVYDANEHKQDFLSDVER--LRFADQCIDSVNVKQRSILEYTASYEDLI 372
I + V + E L + + +L+ + L
Sbjct: 1247 GNDIADGGSGEDVLVGGFGSDTLIGGSENDSLVGGSDNLVLPDTDGEDLLDGGEGDDTLS 1306
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
G D EG D+ +
Sbjct: 1307 GNQGNDSLIG---------GEGNDLIYSGK 1327
>gi|75910924|ref|YP_325220.1| endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC 29413]
gi|75704649|gb|ABA24325.1| Endonuclease/exonuclease/phosphatase [Anabaena variabilis ATCC 29413]
Length = 2346
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 20/203 (9%)
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V D+D D+ S++S P + + + D + IY G +G+
Sbjct: 2075 NVLTNDSDANGDALQLSLVS--NPVNGIAVVNDNGTPGNFADDFI----IYTPNTGYVGS 2128
Query: 205 N--IYKIEVQQKDSPFIQ---TIYDSGGD-DLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ Y I + + TI SGG D ++ G N DL I G
Sbjct: 2129 DSFTYGISDGKGGTATASVSLTINASGGIIGTPDNDILTGT-NRNDL-------IRGLGG 2180
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + +++ G G D+++G + N+ + GND G +G D + L
Sbjct: 2181 NDLLIGGNGNDTLYGDRGKDILLGGNGNDTLYGGDGNDTLIGGNGDDLLVGGKENDLLIG 2240
Query: 319 YRFENAIIVYDANEHKQDFLSDV 341
+ + D + D ++D
Sbjct: 2241 GNGRDRFYLSDTRTGEFDIITDF 2263
>gi|126327138|ref|XP_001366724.1| PREDICTED: similar to matrix metallopeptidase 8 (neutrophil
collagenase) [Monodelphis domestica]
Length = 469
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 66/227 (29%), Gaps = 54/227 (23%)
Query: 16 HLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+ W+ I Y T D+ A WS L F +
Sbjct: 101 QVTDGNPKWNKNDITYSLINYTPDLPKADV-------DSAIEKAFQLWSHPTPLKFTRSD 153
Query: 75 IH--SDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTI 119
+ +DI+ + + +D + + +FD+ + W G +GT
Sbjct: 154 NNNEADIQISFARGAHGDNSPFDGESGILAHAYQPGRGIGGDAHFDEDETWSKG-SRGTN 212
Query: 120 LSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A HE GH+LGL H +P Y F + + +
Sbjct: 213 LFLVAAHEFGHSLGLAHSSDPGALMFPTYS-----------------FSEPSTYVLSQ-- 253
Query: 179 YCATPMVSDIVAVQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTI 222
DI +Q +YG G + Q I T+
Sbjct: 254 -------DDINGIQFLYGQSNNPIKPTGPTTPRTCDPQLTFDAITTL 293
>gi|199652449|gb|ACH91676.1| matrix metallopeptidase 1 [Sus scrofa]
Length = 469
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 67/197 (34%), Gaps = 30/197 (15%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A+ +L W N + Y+ + T D+ A WS V
Sbjct: 94 VPDVAEFVLTPGNPRWENTHLTYRIENYTPDLSREDV-------DRAIEKAFQLWSNVSP 146
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 147 LTFTKVSEGQADIMISFVRGDNRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKN 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG---GYPVYGVDNDYENDSFLTSVMSYFMPQD 170
+ L A HE+GH+LGL H +Y D D + + + P +
Sbjct: 207 F-RDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDID-GIQAIYGPSE 264
Query: 171 SMMDASFGYCATPMVSD 187
+ + S TP V D
Sbjct: 265 NPVQPSG--PQTPQVCD 279
>gi|308388771|gb|ADO31091.1| iron-regulated protein FrpC, truncated [Neisseria meningitidis
alpha710]
Length = 456
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 180 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 237
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 238 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 275
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 276 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 333
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 334 GKGFGQDTVYN 344
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 240 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGE 299
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 300 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 359
Query: 390 GLS 392
+
Sbjct: 360 KAA 362
>gi|224043572|ref|XP_002198018.1| PREDICTED: matrix metallopeptidase 3 (stromelysin 1, progelatinase)
[Taeniopygia guttata]
Length = 513
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 63/200 (31%), Gaps = 49/200 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R W + Y+ T L D+ + +AR A WS V L F +
Sbjct: 151 RSPTWMKEDVTYRILNYTPDMLQADV------EEAIAR-AFQLWSSVTPLRFTRVYGGQA 203
Query: 78 DI------KFISSNNGYVCTPRYDSRYFM-------EINFDKADVWR-YGIGKGTILSHN 123
DI +F + + + + +FD+ + W + G L
Sbjct: 204 DIMISFAARFHGDFYSFDGPGGTLAHAYPPGSGIGGDAHFDEDENWTKFTTYSGYNLFLV 263
Query: 124 ALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GH+LGL H + YP+Y D+
Sbjct: 264 AAHELGHSLGLSHSNVFGALMYPIYMAV-----DTRNY---------------------Q 297
Query: 183 PMVSDIVAVQKIYGAPKGSL 202
DI +Q +YG +
Sbjct: 298 LHQDDIDGIQALYGKQETPS 317
>gi|261393044|emb|CAX50636.1| FrpA/C protein [Neisseria meningitidis 8013]
Length = 1071
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 84/281 (29%), Gaps = 59/281 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-----------TILSHN 123
+D + N Y+ Y F + V+ Y G T
Sbjct: 723 DGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLT 782
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCAT 182
E H L ++ S +V SYF S +
Sbjct: 783 FTREGNHLL------------------IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 824
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+++ + + G++ Y+ +Y + GDDLL+
Sbjct: 825 GKVLDVATVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN------- 875
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
G N +I +++ G GND + G + N+ + GND +
Sbjct: 876 ---------------GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGAEGNDHLN 920
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G DT A + + + + QD + +
Sbjct: 921 GEDGNDTLIGGAGNDYLEGGSGSDTYVF--GEGFGQDTVYN 959
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 855 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGAE 914
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 915 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKGF 974
Query: 390 GLS 392
+
Sbjct: 975 KAA 977
>gi|149642799|ref|NP_001092477.1| matrix metalloproteinase-27 [Bos taurus]
gi|148744231|gb|AAI42135.1| MMP27 protein [Bos taurus]
Length = 510
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 65/194 (33%), Gaps = 48/194 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + + Y+ T D+ E + L WSKV L F + S +DI
Sbjct: 105 WKKHNLTYRIVNYTPDMARADV-------DEAIQKGLEVWSKVTPLIFTKISKGIADIMI 157
Query: 82 ISSNNGYVCTPRYDSRYFM--------------EINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 158 AFKTRVHGSCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKD-GVGFSLFLVAAHE 216
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H T++M P +D S Y + D
Sbjct: 217 FGHSLGLSHSSD-------------------QTALM---FPNYVSLDPSK-YPLS--QDD 251
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG PK
Sbjct: 252 INGIQSIYGPPKVP 265
>gi|291567289|dbj|BAI89561.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2881
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 11/155 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D + + + ID + + I G + + +S+ G++GND + G +
Sbjct: 183 GNDTILGSDLNDA---IDGLSGD-NIIFGLGGDDFLRGGDGADSINGNAGNDTIYGGGGD 238
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER--L 344
+ GND+ G G D F + N + D L E L
Sbjct: 239 DCLRGGQGNDLIFGEGGNDLLFGDKDADTLFAVSGNNTMY----GGQGNDSLIGGENDDL 294
Query: 345 RFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQD 378
F D+ D++ + L A + L G D
Sbjct: 295 MFGDKGNDTLVAGGGNNTLYGGADNDFLFGGTGND 329
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 24/140 (17%)
Query: 204 NNIYKIEVQQK-----------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
N +Y + T+ GG++ L GG N
Sbjct: 275 NTMYGGQGNDSLIGGENDDLMFGDKGNDTLVAGGGNNTL----YGGADNDF--------- 321
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + +VG GND + G +++ F GND+ G G D F
Sbjct: 322 LFGGTGNDLLFGDDGNDELVGGKGNDTIFGGPGDDIIFGGDGNDILRGGKGNDRIFGDEG 381
Query: 313 SYLYKIYRFENAIIVYDANE 332
+ L + R + +
Sbjct: 382 NDLLEGGRGVDTLTGGGGRN 401
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 11/167 (6%)
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ TIY GGDD L + + G N + + ++ N T+
Sbjct: 224 NGNAGNDTIYGGGGDDCLRGGQGNDLIFGEGGNDLLFGDKDADTLFAVSGNNTMYGGQGN 283
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S++G +D++ G+ N+ GN+ G + D F + L F +
Sbjct: 284 DSLIGGENDDLMFGDKGNDTLVAGGGNNTLYGGADNDFLFGGTGNDLL----FGDDGNDE 339
Query: 329 DANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
D + + + F D + + + + DL++
Sbjct: 340 LVGGKGNDTIFGGPGDDIIFGGDGNDILRGGKGNDRIFGDEGNDLLE 386
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 46/139 (33%), Gaps = 8/139 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N TI + +++ G SG++++ G ++ G D +G++G DT +
Sbjct: 180 GTEGNDTILGSDLNDAIDGLSGDNIIFGLGGDDFLRGGDGADSINGNAGNDTIYGGGGDD 239
Query: 315 --------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
N ++ D + +S + + + ++
Sbjct: 240 CLRGGQGNDLIFGEGGNDLLFGDKDADTLFAVSGNNTMYGGQGNDSLIGGENDDLMFGDK 299
Query: 367 SYEDLIQVIGQDVFESMKH 385
+ L+ G +
Sbjct: 300 GNDTLVAGGGNNTLYGGAD 318
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 41/135 (30%), Gaps = 25/135 (18%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V G D + G + N+ GND G G DT S N
Sbjct: 2699 QTVTGGEFGDFLTGGAGNDTLIGLGGNDTLLGLGGNDTLVGGLGSDSLVGGAGNN----- 2753
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
RF Q D + + E IG +++++ F
Sbjct: 2754 ----------------RFLYQSPDDGGGTAFNADSTGSINEQ----IGTGLYDTIADFTG 2793
Query: 389 FGLSEGRDITFDSYL 403
G +EG I F S
Sbjct: 2794 LGEAEGDAIAFSSGF 2808
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 12/119 (10%)
Query: 272 VGSSGNDVVIGNS---------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
VG+ GND ++G+ +N+ F G+D G G D+ A + IY
Sbjct: 179 VGTEGNDTILGSDLNDAIDGLSGDNIIFGLGGDDFLRGGDGADSINGNAGND--TIYGGG 236
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVF 380
+ + F L F D+ D++ V + + + LI D+
Sbjct: 237 GDDCLRGGQGNDLIFGEGGNDLLFGDKDADTLFAVSGNNTMYGGQGNDSLIGGENDDLM 295
>gi|149914898|ref|ZP_01903427.1| calcium binding hemolysin protein, putative [Roseobacter sp.
AzwK-3b]
gi|149811086|gb|EDM70923.1| calcium binding hemolysin protein, putative [Roseobacter sp.
AzwK-3b]
Length = 1051
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 23/153 (15%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T++ GDD + GG + I + G + + + + G GN
Sbjct: 569 GNDTVWGVAGDDTVK----GGWGDDI---------VDGGAGDDKVTGDWGNDQLFGGDGN 615
Query: 278 DVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
DV+ G + +NV F +GN D+ DG +G DT A + + K +
Sbjct: 616 DVIFGGTGDNVLFGGAGNDRLVATGRLDILDGGAGNDTLIAGAETTILKFTTGQTIGARQ 675
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + DF+ + + + S
Sbjct: 676 EVDT-VHDFVLGQDVIEIDGLNFSDRDDGFSSA 707
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 17/119 (14%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ G+D++ + ++ + G + TI+ ++V G GND V
Sbjct: 775 IHAGEGNDVMTGS-------------ATFDQLNGELGDDTISGGAGNDTVKGGWGNDRVD 821
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G S ++ G+D+ G SG DT F S F ++DFL+D
Sbjct: 822 GGSGDDRVTGDWGDDILFGGSGDDTIFGGDGSDSL----FGGNGNDRLVASGQKDFLAD 876
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/348 (18%), Positives = 108/348 (31%), Gaps = 50/348 (14%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ GDDLL T N N W G + T+ + V G +G+D V G+
Sbjct: 548 DAPGDDLLLGTDAADRINGKLGNDTVW----GVAGDDTVKGGWGDDIVDGGAGDDKVTGD 603
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N+ F GNDV G +G + F A + + + D ++ E
Sbjct: 604 WGNDQLFGGDGNDVIFGGTGDNVLFGGAGNDR---LVATGRLDILDGGAGNDTLIAGAET 660
Query: 344 LRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
++ +Q + +D+I++ G + + RD F S
Sbjct: 661 TILKFTTGQTIGARQEVDTVHDFVLGQDVIEIDGLNFSD-------------RDDGFSSA 707
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----------PDAFKALEYIASHEDL 452
+L + +R G++ A EG P ++++
Sbjct: 708 DFLREHASIR---GNNLEIALS--------EGHTVVLKNLVSQLPSTSDSVDFQQIFGGS 756
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD--RGAAARHY 510
A + + V + + G EG V S + +L G D G A
Sbjct: 757 NAASTASIEEVPQAPHGWIHAG--EGNDVMTGSATFDQLNGEL----GDDTISGGAGNDT 810
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ G R D I D + G S FG
Sbjct: 811 VKGGWGNDRVDGGSGDDRVTGDWGDDILFGGSGDDTIFGGDGSDSLFG 858
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 56/179 (31%), Gaps = 35/179 (19%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQ---QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
Q +G GN++ TI G+D +
Sbjct: 769 QAPHGWIHAGEGNDVMTGSATFDQLNGELGDDTISGGAGNDTVK---------------G 813
Query: 249 SWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--------- 297
W + + G + + + + G SG+D + G ++ F +GND
Sbjct: 814 GWGNDRVDGGSGDDRVTGDWGDDILFGGSGDDTIFGGDGSDSLFGGNGNDRLVASGQKDF 873
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVERLRFADQCI 351
+G DT A + + + + + QDFL +++ L F D+
Sbjct: 874 LADGAGNDTLEAGAETTILSFTKNDAPFGPVETDIVHGFTLGQDFL-EIDGLDFDDENG 931
Score = 38.6 bits (88), Expect = 4.0, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 31/113 (27%), Gaps = 8/113 (7%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHK 334
+ N+V S+ D +G G DT A + K + +
Sbjct: 775 IHAGEGNDVMTGSATFDQLNGELGDDTISGGAGNDTVKGGWGNDRVDGGSGDDRVTGDWG 834
Query: 335 QDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L S + + D L + + L G D E+
Sbjct: 835 DDILFGGSGDDTIFGGDGSDSLFGGNGNDRLVASGQKDFLADGAGNDTLEAGA 887
>gi|288575654|ref|ZP_06393871.1| iron-regulated protein FrpC [Neisseria mucosa ATCC 25996]
gi|288567422|gb|EFC88982.1| iron-regulated protein FrpC [Neisseria mucosa ATCC 25996]
Length = 920
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 1/149 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G EK+ T+ + + + G +G+D + G N++ +GND G +G DT A
Sbjct: 598 GTEKDDTLYGNELANFITGGAGDDAISGYGGNDILHGGAGNDTLQGGAGKDTLAGGAGDD 657
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
E V++ H +D +SD + K + + +I+
Sbjct: 658 RLYGGSSEADTYVFE-KGHGKDVVSDSAYQAAHTDTLRFNGAKFAEAVFTRSGNNLVIKA 716
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYL 403
G + +++ +++ D FD
Sbjct: 717 YGGEDAVTVQGYFDSSSYRYYDFAFDDKT 745
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 4/138 (2%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
K ++ ++V+ + +++Y G D D+ G +Y+ + G E
Sbjct: 743 DKTVTAKDMAGMKVEGVGTDGNESLY---GWDTADVLDGGKGNDYLSGYNGDD-LLKGGE 798
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N ++ ++++ G++GND + G ++ GND G G D A
Sbjct: 799 GNDSLYGGEGVDTLEGNAGNDYLSGEKGADILKGGEGNDELHGGEGSDILNGGAGDDRLY 858
Query: 318 IYRFENAIIVYDANEHKQ 335
E V++ +
Sbjct: 859 GGSSEADTYVFEKATARM 876
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 53/172 (30%), Gaps = 16/172 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
GNN+ +D+ +Q +DS D D+ +G
Sbjct: 706 TRSGNNLVIKAYGGEDAVTVQGYFDSSSYRYYDFAFDDKTVTAKDMAGMKVEGVGT---- 761
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
ES+ G DV+ G N+ +G+D+ G G D+ + +
Sbjct: 762 ------DGNESLYGWDTADVLDGGKGNDYLSGYNGDDLLKGGEGNDSLYGGEGVDTLE-- 813
Query: 320 RFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYE 369
NA Y + E D L E + D +N Y S E
Sbjct: 814 --GNAGNDYLSGEKGADILKGGEGNDELHGGEGSDILNGGAGDDRLYGGSSE 863
>gi|221103239|ref|XP_002161129.1| PREDICTED: similar to matrix metalloproteinase, partial [Hydra
magnipapillata]
Length = 440
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 33/199 (16%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKV 65
V T ++ H R + ++ +K LT L+ + L+ N ++ + A +W V
Sbjct: 57 VATPDKSKLHDTRVRRYTAQGSMWKKSDLTWKLLNDNNDNLSRNQVEDALQQAFAKWEVV 116
Query: 66 VDLTFE--ETSI--HSDIKFIS-SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+L F E + H+DI +GY P + +++F + G G L
Sbjct: 117 TNLRFHKLEKNSNEHADIDVSFVYPHGYY--PNNNKGISGDLHFYDETHFTLGTTIGINL 174
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
A+HEIGH +GL H N S+M + M +F
Sbjct: 175 LWVAVHEIGHCIGLEHSSVEN-------------------SIM--YPRYKGCMGENF--- 210
Query: 181 ATPMVSDIVAVQKIYGAPK 199
T DI+ ++ IYG+
Sbjct: 211 -TLSKDDILGIKSIYGSKT 228
>gi|146305756|ref|YP_001186221.1| hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
gi|145573957|gb|ABP83489.1| Hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
Length = 1764
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 65/173 (37%), Gaps = 13/173 (7%)
Query: 189 VAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
A+Q + G + Y+ +V + + ++ + + + D
Sbjct: 399 AALQPL-GDNFIVNASGTSYEAKVTALPDGGFIITWTNANENGDSGSSLFSQRYDADGRP 457
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGND--VVIGNSANNVFFESSGNDVFDGSSGLD 305
+T+ + ++ + +G+D ++ G + ++ +GND+ DG G D
Sbjct: 458 TG--------NAITVIEGDDGDNSLTWTGDDDVILRGGAGDDRLAGGNGNDILDGGQGDD 509
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
T + Y + + A + +D L +E+L+FAD I + Q
Sbjct: 510 TAIFTGDQADYSF-SLDPQGRLQIAKGNLRDTLISIEQLQFADGSITVDDGSQ 561
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 6/140 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G +G++ Y +++ QK + ++ +D + G I L E Y
Sbjct: 1183 GGIGDDTYIVDLVQKGTGAKASV---ALEDTVTEAANAGDDALI-LRGEVL--TENYTTL 1236
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
A +++ + GN+ +NV + ++V DG +G+DT + Y +
Sbjct: 1237 TLGANLETLDASQTGLSRLHLSGNAGDNVLIGNDADNVLDGKAGIDTLIGGKGNDTYVLD 1296
Query: 320 RFENAIIVYDANEHKQDFLS 339
R E +V + D L
Sbjct: 1297 RQEELALVEEIAGEGDDTLR 1316
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 85/268 (31%), Gaps = 28/268 (10%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV--------QKIYGAPKGSLGNN-IY 207
+ + S ++ GY T SD + +IY +G+ +
Sbjct: 851 TQVNSTPGFYNDPAITALEGGGYVITYATSDERELYNGTSRLYAQIYDKNGAKVGDELVI 910
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLT----LIGGVKNYI-----DLNTESWSSIGGYEK 258
Q P + D G + + GG I D N S + G
Sbjct: 911 ASSPNQDFFPSVTASADGGFLVTWEASERTANYGGGSGDIYVKRFDANGNSLTLSGDDGD 970
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + S+ G +GND + G ++V +GN+V G G D + + +
Sbjct: 971 NTLTWTGSSGVSLDGGAGNDTLTGGDGHDVLIGGAGNNVLKGGKGNDLYIIENANDILIE 1030
Query: 319 YRFENAIIVYDANEHKQD------FLSDVERLRFADQCIDSVNVKQR--SILEYTASYED 370
V + L+ + ++ V R +IL+ A +
Sbjct: 1031 EAGGGIDTVMTGASYTLGEHLENLTLTGDADINGTGNNAENRLVGNRGNNILDGGAGADT 1090
Query: 371 LIQVIGQD--VFESMKHFYEFGLSEGRD 396
LI G D + ++++ EG D
Sbjct: 1091 LIGGEGDDIYIVDNLRDVVIEKEGEGTD 1118
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 17/169 (10%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-------VVGSSGN 277
GDD + I+L+ E + N T+ + +E+ + +GN
Sbjct: 1374 GAGDDTYIVGHK--DAQVIELDGEGDNDTVKSTVNWTLGAN--LENLTLLGKAALNGTGN 1429
Query: 278 ---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+++IGN NN+ +G D +G G DT+ + + + I
Sbjct: 1430 ELSNLLIGNDGNNILDGGTGADRMEGGKGNDTYIVDHEDDV--VVENDKEGIDTVKASVT 1487
Query: 335 QDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+VE L ID + + + L G D
Sbjct: 1488 YTLGDNVENLILTGSGDIDGSGNELNNAITGNEKDNRLDGGAGVDKLAG 1536
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ ++ +IGN NN +GND DG GLD Y I A+
Sbjct: 1147 GNELDNRLIGNDGNNSLNGGAGNDYLDGGKGLDKLIGGIGDDTY-IVDLVQKGTGAKASV 1205
Query: 333 HKQDFLS 339
+D ++
Sbjct: 1206 ALEDTVT 1212
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG--------GDDLLDL------TLIGGVKNY---IDL 245
GN+ Y +++ QK + T G D L+L + G + +L
Sbjct: 1539 GNDTYIVDLIQKGTGAKATAVLEDSIVEKANEGTDTLELRSDRLPSEFSGTASITLGANL 1598
Query: 246 ------NTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA---NNVFFESSGN 295
NT + ++ G N I + ++ G +GND++ + NN+ +G
Sbjct: 1599 ENLDARNTGTLKLTLTGNALNNEIWGNAGDNTLNGGAGNDILHAGNGVGSNNILIGGAGA 1658
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
D+ G +G DTF + + L ++D N+ +D L
Sbjct: 1659 DIMHGGAGDDTFRFTSLKDLG--LGEGKQDEIHDFNKEGKDKL 1699
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 26/140 (18%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ Y ++ +D ++ D G D + + N +L I G
Sbjct: 1458 GNDTYIVD--HEDDVVVEN--DKEGIDTVKASVTYTLGDNVENLILTGSGDIDGS----- 1508
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY---APSYLYKI 318
G+ N+ + GN +N +G D G G DT+ +
Sbjct: 1509 -----------GNELNNAITGNEKDNRLDGGAGVDKLAGGGGNDTYIVDLIQKGTGAKAT 1557
Query: 319 YRFENAIIVYDANEHKQDFL 338
E++I+ + D L
Sbjct: 1558 AVLEDSIV--EKANEGTDTL 1575
Score = 44.3 bits (103), Expect = 0.057, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 14/198 (7%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDL 245
G+ G+N+ I T+ G+D L + G + + +
Sbjct: 1258 SGNAGDNVLIGNDADNVLDGKAGIDTLIGGKGNDTYVLDRQEELALVEEIAGEGDDTLRI 1317
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S ++ A +E++ + SG +IGN NV + V G +G
Sbjct: 1318 TYRNNSKTEALVVDLNQANLQHVENIQLTGSGIFELIGNDFANVLDGGNNAAVLRGGAGD 1377
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT+ E + + + ++ + ++L
Sbjct: 1378 DTYIVGHKDAQVIELDGEGDNDTVKSTVNWTLGANLENLTLLGKAALNGTGNELSNLLIG 1437
Query: 365 TASYEDLIQVIGQDVFES 382
L G D E
Sbjct: 1438 NDGNNILDGGTGADRMEG 1455
>gi|317484308|ref|ZP_07943231.1| hypothetical protein HMPREF0179_00582 [Bilophila wadsworthia 3_1_6]
gi|316924452|gb|EFV45615.1| hypothetical protein HMPREF0179_00582 [Bilophila wadsworthia 3_1_6]
Length = 3916
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G D I G + I + + G G+D + G + +++ + +G
Sbjct: 3699 GHAGADTLGDQTAAHSQVIFGEGGDDVIHGGAGNDWLFGGEGDDQIFGGTGDDILYGGAG 3758
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
ND DG +G ++ + A + + N + + + DFL E+
Sbjct: 3759 NDYLDGGTGHNSLYGGAGNDILVY----NQGMAHASGGEGIDFLVGAEK 3803
Score = 44.0 bits (102), Expect = 0.094, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G + + Q I+ GGDD++ GG N E I G +
Sbjct: 3699 GHAGADTLGDQTAAHS----QVIFGEGGDDVI----HGGAGNDWLFGGEGDDQIFGGTGD 3750
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G +G++ + G + N++ + G G G+D L ++
Sbjct: 3751 DILYGGAGNDYLDGGTGHNSLYGGAGNDILVYNQGMAHASGGEGIDFLVGAEKDTLDSLF 3810
Query: 320 RFEN 323
+
Sbjct: 3811 ANPD 3814
>gi|238760190|ref|ZP_04621336.1| serine protease [Yersinia aldovae ATCC 35236]
gi|238701569|gb|EEP94140.1| serine protease [Yersinia aldovae ATCC 35236]
Length = 1369
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 74/214 (34%), Gaps = 17/214 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA---QHT 266
V K T+ GG+D+L S + I + +I Q
Sbjct: 464 SVFIKGGNGNSTLVGGGGNDVLAGGGGKNKIIG----GSSKAVIYAGSQGDSIYASEQGC 519
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+I G D + GN N++ GN + DG G++ + Y I R ++ +
Sbjct: 520 II---YAGGGADRIYGNKGNDIIEAGQGNALIDGGGGVNVVSLHGTHADYIITRTDSGYL 576
Query: 327 VYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D A L ++++L F+D ++ ++ + + +D F
Sbjct: 577 IRDKVAGRDGTLALKNIQKLNFSDISAVDLHTNTIIPIDDVLTRSKSDRPFSRDRF---- 632
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
H D++F+ L + + G D
Sbjct: 633 HLIRGADLLVNDLSFNDKSSLHI-TAVSDAIGGD 665
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 13/114 (11%)
Query: 204 NNIY----KIEVQQKDSPFIQTIYDS-----GGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+++Y + Q + P + D+ GG + L+ + G +L T +++G
Sbjct: 1211 DDVYFYTDEFAAQVAEQPTRAILTDAVNGVPGGRNTLNTAAMSG-DVKANLITGE-ANLG 1268
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G +TI I ++V GNDV+ N++ G + G +G + F
Sbjct: 1269 GTT--LTIRSPQTIHNIVSGDGNDVLTAGRNNSLLDGGRGRNTLVGGAGKEIFV 1320
>gi|194678314|ref|XP_609577.4| PREDICTED: matrix metalloproteinase 25 [Bos taurus]
gi|297490016|ref|XP_002697915.1| PREDICTED: matrix metalloproteinase 25 preproprotein-like [Bos
taurus]
gi|296473539|gb|DAA15654.1| matrix metalloproteinase 25 preproprotein-like [Bos taurus]
Length = 674
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 67/202 (33%), Gaps = 50/202 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETS 74
+ L W + ++ + + L+ + + AL W DL F+E
Sbjct: 221 YALSGSVWKKRTLTWRVNSFPQG------SGLSQETVRTLMHHALTTWGAESDLRFQEVG 274
Query: 75 IHS----DIKFISSNNGYVCTPRYDSRYF--------------MEINFDKADVWRYGI-- 114
DI + + + +D + + +FD + W +G
Sbjct: 275 SQGPTEPDILIDFARAYHQDSYPFDGQGGTLAHAFFPGEHPISGDTHFDDEETWTFGSKD 334
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G+GT L A+HE GHALGL H + + S+M F
Sbjct: 335 GEGTDLFAVAVHEFGHALGLGHSSAPD-------------------SIMRPFYQGPVGNP 375
Query: 175 ASFGYCATPMVSDIVAVQKIYG 196
A + D +Q++YG
Sbjct: 376 AEYRLSQ----DDREGLQQLYG 393
>gi|284051143|ref|ZP_06381353.1| hypothetical protein AplaP_06687 [Arthrospira platensis str.
Paraca]
Length = 889
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 11/134 (8%)
Query: 224 DSGGDD-------LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
D GDD + +IG N + L + + G N TIA + + G SG
Sbjct: 10 DRDGDDFTQNLLQNWNYEVIGTEANNVILLGGGFDVVYGIAGNNTIAGGLDDDILYGGSG 69
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----DANE 332
ND++ GN N++ SG+++ G G D + S + + +
Sbjct: 70 NDIIAGNDGNDILDGGSGSNILAGGRGNDIYRVSLGSNTGGTIINDGGTHLSPLEWISGS 129
Query: 333 HKQDFLSDVERLRF 346
+ E F
Sbjct: 130 GTDTLIIYEESFPF 143
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++L G +L + G E N I + V G +GN+ + G +++
Sbjct: 5 TINLADRDGDDFTQNLLQNWNYEVIGTEANNVILLGGGFDVVYGIAGNNTIAGGLDDDIL 64
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ SGND+ G+ G D + S + R + V + ++D
Sbjct: 65 YGGSGNDIIAGNDGNDILDGGSGSNILAGGRGNDIYRVSLGSNTGGTIIND 115
>gi|260575603|ref|ZP_05843601.1| hlyA-like protein [Rhodobacter sp. SW2]
gi|259022246|gb|EEW25544.1| hlyA-like protein [Rhodobacter sp. SW2]
Length = 1033
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 63/178 (35%), Gaps = 8/178 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIG 254
G + G+ V +++ +GG D ++ T+ + + +L ++I
Sbjct: 782 GNDTLTGGDGNDSYLVDSSADVIVESATVAGGVDTVNATVTWALGATLENLTLGGTATIN 841
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + A + G++ +V++GN+ N+ GND G +G D +
Sbjct: 842 GSGNSANNA-------LTGNAAANVLVGNAGNDTLNGGLGNDTLTGGAGTDVLTGGGGAD 894
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ A +V D + L D + N + ++ +L+
Sbjct: 895 AFVFNSTVGADVVTDFTSGSDRLRVSMASLPVGDGDLLIENSSLTAATGGFSAAAELV 952
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 69/201 (34%), Gaps = 15/201 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWS 251
G + G+ V +++ SGG D + TL ++N I L+ +
Sbjct: 672 GNDTLTGGDGNDVFVVDSAADVIVESAAVSGGVDTVVSAVTWTLGALLENLI-LSGVALI 730
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G K + + + G +GND + G + N+ G+D DG +G DT
Sbjct: 731 NGTGNTKANVLTGNAAANVLSGLAGNDSITGGAGNDSVLGGLGDDRLDGGTGNDTLTGGD 790
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLRFADQCIDSVNVKQR-SI 361
+ Y + + I+ D + + +E L + + +
Sbjct: 791 GNDSYLVDSSADVIVESATVAGGVDTVNATVTWALGATLENLTLGGTATINGSGNSANNA 850
Query: 362 LEYTASYEDLIQVIGQDVFES 382
L A+ L+ G D
Sbjct: 851 LTGNAAANVLVGNAGNDTLNG 871
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 8/173 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D + L + GG + I+ IE++ GS ND + G++
Sbjct: 609 GGVDTASYAAAT-TGVSVSLAVAGAQATGGGGSDTLIS----IENLTGSGANDSLTGDAL 663
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N GND G G D F + + + + + + + +E L
Sbjct: 664 ANTLNGGLGNDTLTGGDGNDVFVVDSAADVIVESAAVSGGVDTVVSAVTWTLGALLENLI 723
Query: 346 FADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGR 395
+ + + ++L A+ L + G D GL + R
Sbjct: 724 LSGVALINGTGNTKANVLTGNAAANVLSGLAGNDSITGGAGNDSVLGGLGDDR 776
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 74/216 (34%), Gaps = 11/216 (5%)
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDS 225
P +S G + D + + + N Y +V + +P +Q T+
Sbjct: 479 TPTAQGNGSSGGAPQISLGGDWIVFESS-ATNLATTDANTYLTDVFRVANPLLQDTLTGG 537
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNS 284
G+D L +N I + + +++ A +E+ V+ + GN+
Sbjct: 538 AGNDTYVL-----ARNDI-VVEAVGGGTDTVQSSISHALGANVENLVLLGTAGLSGTGNA 591
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
NNV + GN++ +G G+DT Y A + + D L +E L
Sbjct: 592 LNNVITGTLGNNLINGLGGVDTASYAAATTGVSVSLAVAGAQ--ATGGGGSDTLISIENL 649
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + L G DVF
Sbjct: 650 TGSGANDSLTGDALANTLNGGLGNDTLTGGDGNDVF 685
>gi|158338174|ref|YP_001519351.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158308415|gb|ABW30032.1| hemolysin-type calcium-binding region protein, putative
[Acaryochloris marina MBIC11017]
Length = 1227
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 30/199 (15%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---- 265
T+ GG+D+ D L ++ D+ + + + + + I Q
Sbjct: 952 NDTLLGGAGNDTLRGGGGNDITDGGLGIDTADFSDIGAAVTARLDEHGRGIAIYQGPNGR 1011
Query: 266 -----TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
IE+++GS+ D + GN N +GND G +G D + +
Sbjct: 1012 VVDRLISIENLIGSANADSLSGNELANELAGGAGNDTLLGGAGDDILRGGGGNDVTDGGL 1071
Query: 321 FENAIIVYD---------------------ANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ D N D L +E L ++ + +
Sbjct: 1072 GIDTADFSDIGAAVTASIDEHGRGTATYQGPNGLVTDQLISIENLTGSENNDVLLGNAEV 1131
Query: 360 SILEYTASYEDLIQVIGQD 378
++L + L +G D
Sbjct: 1132 NVLVGNGGDDTLTGGLGAD 1150
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 49/166 (29%), Gaps = 14/166 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D + + L S ++ G N I + G+ GND + G + N
Sbjct: 895 GVDTGDGNVFTEIIETDTL--ASIENVVGSNDNDVILAAAGNNRLEGNDGNDELAGGAGN 952
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY------------DANEHK 334
+ +GND G G D A+ N
Sbjct: 953 DTLLGGAGNDTLRGGGGNDITDGGLGIDTADFSDIGAAVTARLDEHGRGIAIYQGPNGRV 1012
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L +E L + + + L A + L+ G D+
Sbjct: 1013 VDRLISIENLIGSANADSLSGNELANELAGGAGNDTLLGGAGDDIL 1058
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 6/143 (4%)
Query: 200 GSLGNNIY--KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGV-KNYIDLNTESWSSIGG 255
G GN+ + D G G D D + IG ID + ++ G
Sbjct: 1042 GGAGNDTLLGGAGDDILRGGGGNDVTDGGLGIDTADFSDIGAAVTASIDEHGRGTATYQG 1101
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-Y 314
+T Q IE++ GS NDV++GN+ NV + G+D G G DTF + +
Sbjct: 1102 PNGLVT-DQLISIENLTGSENNDVLLGNAEVNVLVGNGGDDTLTGGLGADTFVFGPEALG 1160
Query: 315 LYKIYRFENAIIVYDANEHKQDF 337
+ F++ + + D +
Sbjct: 1161 ADVVTDFQDGLDLLDVSAFSLGT 1183
>gi|83953143|ref|ZP_00961865.1| hypothetical protein NAS141_12581 [Sulfitobacter sp. NAS-14.1]
gi|83842111|gb|EAP81279.1| hypothetical protein NAS141_12581 [Sulfitobacter sp. NAS-14.1]
Length = 829
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 11/181 (6%)
Query: 198 PKGSLGNN----IYKIEVQQKDSPF--IQTIYDSGGDDLLDLT-----LIGGVKNYIDLN 246
GNN +Y +++ G D L+ + L+GG N
Sbjct: 615 NDTLTGNNGADRLYGDRDDDHLIGGLNADSLWGGAGKDRLEGSAGADQLLGGSGNDQLFG 674
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G N +A ++V G SGND + G++ + G+D+ G++G DT
Sbjct: 675 NAGADFLQGDSGNDRLAGGINNDTVNGGSGNDTLSGDNGADQLIGGDGDDLIKGNAGHDT 734
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
A + + + I + F ++++ L ++ + +
Sbjct: 735 LDGGAGNDVLSGGIGADRFIYGAGQDTILSFQNEIDTLSLDSALWGGGSLSMSQLQSFAH 794
Query: 367 S 367
Sbjct: 795 K 795
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 5/173 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
TIY +GG DL++ GG + W ++ G + + +
Sbjct: 550 GGNDTILGEAGADTIYGNGGSDLIE----GGTEGDQIWGGIGWDTLRGSDGDDALWGGDG 605
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G GND + GN+ + + +D G D+ + A + ++
Sbjct: 606 YDALGGGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADSLWGGAGKDRLE-GSAGADQLL 664
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + + L+ + + + L G D
Sbjct: 665 GGSGNDQLFGNAGADFLQGDSGNDRLAGGINNDTVNGGSGNDTLSGDNGADQL 717
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 50/169 (29%), Gaps = 21/169 (12%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ +GG+D + L +I G + I T + + G G D +
Sbjct: 546 LIGAGGNDTI-------------LGEAGADTIYGNGGSDLIEGGTEGDQIWGGIGWDTLR 592
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYRFENAIIVYDANEH 333
G+ ++ + G D G G DT Y + I + A +
Sbjct: 593 GSDGDDALWGGDGYDALGGGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADSLWGGAGKD 652
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + ++L L+ + + L I D
Sbjct: 653 RLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGNDRLAGGINNDTVNG 701
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 19/162 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSG 303
+ G + I+ + ++G+ GND ++G + + + + G+D+ G G
Sbjct: 528 LEGDAADDHISGRADGDRLIGAGGNDTILGEAGADTIYGNGGSDLIEGGTEGDQIWGGIG 587
Query: 304 LDTFFYYAPSYL------YKIYRFENAIIVYDANEHKQDFL--SDVERLRFADQCIDSVN 355
DT Y + N D + L
Sbjct: 588 WDTLRGSDGDDALWGGDGYDALGGGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADSLWG 647
Query: 356 VKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGR 395
+ LE +A + L+ G D + F + R
Sbjct: 648 GAGKDRLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGNDR 689
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
D + G + +++ + G D+ G SG D F A I F++A
Sbjct: 387 DHISGRAGDDILRDGGGRDLLTGGSGRDLFVLSADGEADTIADFDSA 433
>gi|254422172|ref|ZP_05035890.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196189661|gb|EDX84625.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 669
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 3/136 (2%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGDD LIGG N I L + + ++ G T+ +++ G GND + G
Sbjct: 524 GGDD--RDILIGGDDNDILLGEQGFDTLYGGNGEDTLFGDNGKDTLFGGDGNDSLDGGVG 581
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERL 344
+ GND G G DTF + I F ++ A+ LS V +
Sbjct: 582 KDTLIGGRGNDTLTGGGGKDTFVLAVGNGTDTITDFSGQDLIGLASGLGIGELSFVGNNI 641
Query: 345 RFADQCIDSVNVKQRS 360
F D +
Sbjct: 642 IFTDTNEVLATLTNVD 657
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 2/126 (1%)
Query: 244 DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
DL S+ + G E + + + ++G ND+++G + + +G D G
Sbjct: 502 DLLDGRDSNDFLDGNEGDDFLLGGDDRDILIGGDDNDILLGEQGFDTLYGGNGEDTLFGD 561
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G DT F + ++ +I N+ + D++
Sbjct: 562 NGKDTLFGGDGNDSLDGGVGKDTLIGGRGNDTLTGGGGKDTFVLAVGNGTDTITDFSGQD 621
Query: 362 LEYTAS 367
L AS
Sbjct: 622 LIGLAS 627
Score = 44.7 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 10/182 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-------VKNYIDLNTESWSSIGGYEKNMT 261
+++ D I + GDD ++ G + + I + + K+
Sbjct: 417 LDLSSLDGSSGFVINGNDGDDGFGRSVSGTGDVNGDEIDDLIIGAPAAAPTGERSGKSYV 476
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + E ++G+ G D +IG +++ ND DG+ G D +
Sbjct: 477 IFGAAMGELLIGTQGKDTLIGGKGDDLLDGRDSNDFLDGNEGDDFLLGG--DDRDILIGG 534
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDVF 380
++ I+ + + E F D D++ + L+ + LI G D
Sbjct: 535 DDNDILLGEQGFDTLYGGNGEDTLFGDNGKDTLFGGDGNDSLDGGVGKDTLIGGRGNDTL 594
Query: 381 ES 382
Sbjct: 595 TG 596
>gi|325198549|gb|ADY94005.1| Iron-regulated protein frpC [Neisseria meningitidis G2136]
Length = 1619
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 934 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 991
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 992 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1029
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1030 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1087
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 1088 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 1135
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 734 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 791
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 792 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 829
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 830 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 887
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 888 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 935
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 534 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 591
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 592 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 647
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 648 VLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 707
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 708 IIRFTDGITAD 718
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1134 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1191
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 1192 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 1247
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 1248 VLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 1307
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 1308 IIRFTDGITAD 1318
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 1334 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 1391
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 1392 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1429
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 1430 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1487
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1488 GKGFGQDTVYN 1498
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 441 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 500
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 501 YATGRKDIIRFTDGITAD 518
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 1394 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 1453
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1454 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1513
Query: 390 GLS 392
+
Sbjct: 1514 KAA 1516
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 32/95 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 594 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGAE 653
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
N+H + + A + +
Sbjct: 654 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 688
>gi|241758766|ref|ZP_04756879.1| putative RTX toxins and related Ca2+-binding protein [Neisseria
flavescens SK114]
gi|241320974|gb|EER57187.1| putative RTX toxins and related Ca2+-binding protein [Neisseria
flavescens SK114]
Length = 569
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 91/261 (34%), Gaps = 53/261 (20%)
Query: 119 ILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTS--VMSYFMPQDSMM 173
I + HE+GHALG H SY Y Y + + M + + +
Sbjct: 82 ITARTMSHEVGHALG-KHQAKSASYYDTAKAYAQARGYGEAEAIFNEARMVAYEERYNGR 140
Query: 174 DASFGYCATPMVS----------DIVAVQKIYGA-PKGSLGN---NIYKIEVQ------- 212
S G D++A Q +YG P G+ Y+ +++
Sbjct: 141 AYSTGISGDLYPYVKGKSFGEVKDLIARQNMYGMYPSNGTGSIRMTYYETDIEHFLNTRT 200
Query: 213 -----------QKDSPFIQT-------IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+S + + + G++ + + + +++
Sbjct: 201 NFSKDFKEASISPNSKQVFVKHMANYDTFGNKGNNKIVADGSYSRDSLLIGRAKTY---- 256
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + + + G++ ND+++G S N+V +GND+ G+SG D F
Sbjct: 257 -LKSGAYMYGDAGDDILKGTNQNDILLGGSGNDVLIGGNGNDILAGNSGRDKLFGGKGHD 315
Query: 315 LYKIYRFENAIIVYDANEHKQ 335
Y R +N I+ D++ +
Sbjct: 316 KY---RADNLDIIRDSDGKGE 333
>gi|149051938|gb|EDM03755.1| rCG35535 [Rattus norvegicus]
Length = 531
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 70/212 (33%), Gaps = 55/212 (25%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFE 71
+ L W + + ++ + +Q V R +AL W+ LTF+
Sbjct: 78 YTLSGSVWKKRTLTWSIQ---------SFSQSSRLSQSVVRTLVSYALDVWAVASGLTFQ 128
Query: 72 ETSIH---SDIKFISSNNGYVCTPRYDSRYF--------------MEINFDKADVWRYGI 114
E DI S + + +D + +FD + W +G
Sbjct: 129 EVDSQYQEPDIVIHFSRAYHQDSYPFDGPGGTLAHAFFPGEHPISGDTHFDDEETWTFGS 188
Query: 115 --GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G+GT L A+HE GHALGL H + + S+M F
Sbjct: 189 TDGEGTDLFAVAVHEFGHALGLGHSSAPD-------------------SIMRPFYQGPVG 229
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
++ D +Q++YG + +
Sbjct: 230 DPGTYRLSQ----DDRDGLQQLYGRVSQTPND 257
>gi|148222573|ref|NP_001079874.1| hypothetical protein LOC379564 [Xenopus laevis]
gi|33585866|gb|AAH56080.1| MGC69070 protein [Xenopus laevis]
Length = 258
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 55/190 (28%), Gaps = 49/190 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------ 75
W+ + Y+ T P E R A WS V L F S
Sbjct: 101 RWAKTQLSYRIVNYTPDLPR-------PVVDEAIRMAFKVWSDVTPLKFTRVSSRRADIL 153
Query: 76 -------HSD-IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D I F N + + +FD+ + W G L A HE
Sbjct: 154 IQFGARSHGDGIPFDGPNGVLAHAYAPGNGIGGDAHFDEDERWTSSSA-GFNLFLVAAHE 212
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GH+LGL H +P Y Y ++ +
Sbjct: 213 FGHSLGLDHSRDARALMFPNYR----------------YVNTRNFRLPQ----------D 246
Query: 187 DIVAVQKIYG 196
D+ +Q IYG
Sbjct: 247 DVNGIQSIYG 256
>gi|149912995|ref|ZP_01901529.1| hypothetical protein RAZWK3B_03365 [Roseobacter sp. AzwK-3b]
gi|149813401|gb|EDM73227.1| hypothetical protein RAZWK3B_03365 [Roseobacter sp. AzwK-3b]
Length = 813
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 65/186 (34%), Gaps = 26/186 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPF--IQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSS 252
G+ +++Y + I ++ G D L TL GG N L
Sbjct: 532 GTGADSLYGGDGNDSLEGLSSIDLLFGEAGHDTLAGGIGADTLYGGSGNDRLLGNTGVDL 591
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + I+ ++ V G +GND VIG + + F G+D GS G D + A
Sbjct: 592 IYGGDGDDWISPGNGVDVVYGDAGNDTVIGRTGWDTLFGGDGDDSLLGSEGQDDLYGEAG 651
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
DFL + DQ +++ +LE + + L
Sbjct: 652 DDTLS-------------GGFGFDFLYGGDGH---DQLFENLG---SDLLEGGSGNDSLF 692
Query: 373 QVIGQD 378
G D
Sbjct: 693 GATGND 698
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 11/164 (6%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI +GG D++ T +GG L + G + T+ T +S+ G GN
Sbjct: 489 GNDTINGAGGGDVI--TGMGGNDRL--LGEAGADILRGGPGHDTLIGGTGADSLYGGDGN 544
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G S+ ++ F +G+D G G DT + + + N + D+
Sbjct: 545 DSLEGLSSIDLLFGEAGHDTLAGGIGADTLYGGSGNDRL----LGNTGVDLIYGGDGDDW 600
Query: 338 LS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+S V+ + + L + L+ GQD
Sbjct: 601 ISPGNGVDVVYGDAGNDTVIGRTGWDTLFGGDGDDSLLGSEGQD 644
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 10/142 (7%)
Query: 222 IYDSGGDDLLD----LTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSG 276
+Y GDD L + G + L S + G N ++ T +++ G G
Sbjct: 646 LYGEAGDDTLSGGFGFDFLYGGDGHDQLFENLGSDLLEGGSGNDSLFGATGNDTLRGGPG 705
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+DV+ G+ +V GND G S D F + I FE A + + D
Sbjct: 706 HDVIQGSQGLDVIEGGPGNDTMRGGSLADEFIFRRGDDRDAILDFEAAHDILMLDAALVD 765
Query: 337 FLSDVERLR-----FADQCIDS 353
++ + + F D +
Sbjct: 766 GPANAQTVLDRHASFGDGTVTL 787
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 17/141 (12%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N TI + + G GND ++G + ++ G+D G +G D+ + +
Sbjct: 486 GGEGNDTINGAGGGDVITGMGGNDRLLGEAGADILRGGPGHDTLIGGTGADSLYGGDGND 545
Query: 315 LYKIYR-----FENAIIVYDANEHKQDFL------------SDVERLRFADQCIDSVNVK 357
+ F A A D L + V+ + D
Sbjct: 546 SLEGLSSIDLLFGEAGHDTLAGGIGADTLYGGSGNDRLLGNTGVDLIYGGDGDDWISPGN 605
Query: 358 QRSILEYTASYEDLIQVIGQD 378
++ A + +I G D
Sbjct: 606 GVDVVYGDAGNDTVIGRTGWD 626
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 55/188 (29%), Gaps = 35/188 (18%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-----AQHTVI------------- 268
G D +DL+ G+ + + + E+ S + A I
Sbjct: 406 GQDRVDLSDWEGLYSTLQIGLETLSDGARITYGADVLTLRTASGAAIGWREILETDMLGI 465
Query: 269 ----------------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ ++G GND + G +V GND G +G D
Sbjct: 466 VRIAPPEFLTTQTDAPDVLLGGEGNDTINGAGGGDVITGMGGNDRLLGEAGADILRGGPG 525
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+++ D N+ + LS ++ L L + + L+
Sbjct: 526 HDTLIGGTGADSLYGGDGNDSLEG-LSSIDLLFGEAGHDTLAGGIGADTLYGGSGNDRLL 584
Query: 373 QVIGQDVF 380
G D+
Sbjct: 585 GNTGVDLI 592
>gi|126327144|ref|XP_001366886.1| PREDICTED: similar to Matrix metallopeptidase 13 (collagenase 3)
[Monodelphis domestica]
Length = 475
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 54/178 (30%), Gaps = 40/178 (22%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISS--NNGYVC 90
LT L++ + R AL WS V L F + +DI +G
Sbjct: 121 NLTYRILNYTPDMTQAEVDKAIRKALKVWSDVTPLNFTRLHNGTADIMISFGIKEHGDFY 180
Query: 91 ---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
P Y + +FD ++W KG L A HE GH+LGL H
Sbjct: 181 PFDGPSGLLAHAFPPGPNYGGDAHFDDDEIWT-NSAKGYNLFLVAAHEFGHSLGLDHSKD 239
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+M P + S D+ +Q +YG
Sbjct: 240 PGA-------------------LM---FPIYTYTGKSGFMLP---DDDVQGIQALYGP 272
>gi|213972541|ref|NP_598214.1| collagenase 3 [Rattus norvegicus]
gi|149020733|gb|EDL78538.1| matrix metallopeptidase 13 [Rattus norvegicus]
Length = 472
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 63/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T +E+ ++ R A WS V L F +
Sbjct: 110 RTLKWSQTNLTYRIVNYT---PDISHSEV----EKAFRKAFKVWSDVTPLNFTRIHDGTA 162
Query: 78 DIKFISSN------NGYVCTPRYDSRYFM-------EINFDKADVWRYGIGKGTILSHNA 124
DI + + F + +FD + W KG L A
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGGDAHFDDDETWT-SSSKGYNLFIVA 221
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE+GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 222 AHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 279
Query: 181 ATPMVSD 187
TP D
Sbjct: 280 KTPEKCD 286
>gi|126723537|ref|NP_001075506.1| collagenase 3 precursor [Oryctolagus cuniculus]
gi|5921829|sp|O62806|MMP13_RABIT RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|3089539|gb|AAC39251.1| collagenase-3 precursor [Oryctolagus cuniculus]
Length = 471
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 65/187 (34%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ + A WS V L F + +
Sbjct: 109 RTLKWSQTNLTYRIVNYTPDLTHSEV-------EKAFKKAFKVWSDVTPLNFTRIHNGTA 161
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|313681718|ref|YP_004059456.1| hemolysin-type calcium-binding region [Sulfuricurvum kujiense DSM
16994]
gi|313154578|gb|ADR33256.1| Hemolysin-type calcium-binding region [Sulfuricurvum kujiense DSM
16994]
Length = 2393
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V + GND + + N+ F +G+D G SG DT Y Y I R VY
Sbjct: 2182 DTVGSAGGNDRIFAEAGNDTVFGGTGDDFMHGGSGNDTVTYDGNRGDYVITRDNGKTYVY 2241
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + D + + E ++FAD N +
Sbjct: 2242 TVSTGETDTVVNAESIQFADAIYTITNNE 2270
>gi|148235497|ref|NP_001087063.1| stromelysin-1 [Xenopus laevis]
gi|50417744|gb|AAH77966.1| Mmp13-prov protein [Xenopus laevis]
Length = 458
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 60/197 (30%), Gaps = 54/197 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W I Y+ T +E++ A WS V L F++
Sbjct: 84 WQKTTITYRILNYT---PDITKSEVDY----AIAQAFRVWSDVTPLNFQKLNSVDADILI 136
Query: 73 ---TSIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
T H D NG + + + +FD+ + W G +G + A HE
Sbjct: 137 SFNTKAHGDFNSFDGPNGVLAHAYAPAEGIGGDAHFDEDEQWTLGP-QGANIFLVAAHEF 195
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM---- 184
GH+LGL H N +M ASFG P
Sbjct: 196 GHSLGLSHSNDPNA-------------------LM--------FPTASFGMTINPAQYKL 228
Query: 185 -VSDIVAVQKIYGAPKG 200
DI +Q +YG
Sbjct: 229 SADDIAGIQTLYGRRNS 245
>gi|83949834|ref|ZP_00958567.1| type I secretion target repeat protein [Roseovarius nubinhibens
ISM]
gi|83837733|gb|EAP77029.1| type I secretion target repeat protein [Roseovarius nubinhibens
ISM]
Length = 404
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 21/179 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + ++ G+D + S+ G N I+ T +
Sbjct: 162 NDRVEAGNGNDIVWGGSGNDTIYG-------------QGGADSLMGGTGNDYISGGTSND 208
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +G D + GNS N+ F + NDV +G G D + + + K + +
Sbjct: 209 TIRGETGADRLYGNSGNDRIFGGANNDVLNGGGGDDRLYGGSGADHMKGGTGRDHLDGSS 268
Query: 330 ANEH-----KQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N+ D L + L + R +L + + L +D F
Sbjct: 269 GNDSLYGNAGNDTLIGGSGRDVLNGGGENDVLRGGNDRDLLHGSTGNDVLTGGAAEDRF 327
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 5/191 (2%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + +Y + +GG D L GG + G N
Sbjct: 214 TGADRLYGNSGNDRIFGGANNDVLNGGG--GDDRLYGGSGADHMKGGTGRDHLDGSSGND 271
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ + ++++G SG DV+ G N+V + D+ GS+G D A +
Sbjct: 272 SLYGNAGNDTLIGGSGRDVLNGGGENDVLRGGNDRDLLHGSTGNDVLTGGAAEDRFVFRD 331
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFA---DQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + D N+ + L D + Q + S + + D + + G
Sbjct: 332 GWDRDRITDFNKSQDTLLLDNNLWSGSLSTSQVVSRFAKDTGSNVVFDFGGGDTLTLQGV 391
Query: 378 DVFESMKHFYE 388
+ +
Sbjct: 392 GSISGLSDAID 402
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 53/187 (28%), Gaps = 14/187 (7%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
Q P + D + D + ID G N +
Sbjct: 111 TVGYVDPQNYVPKGYSARDGNIINDYD-ANYAASRRTIDGGDGRDLIAAGL-NNDRVEAG 168
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-------YAPSYLYKI 318
+ V G SGND + G + +GND G + DT Y S +I
Sbjct: 169 NGNDIVWGGSGNDTIYGQGGADSLMGGTGNDYISGGTSNDTIRGETGADRLYGNSGNDRI 228
Query: 319 YRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ N ++ D L S + ++ L A + LI
Sbjct: 229 FGGANNDVL--NGGGGDDRLYGGSGADHMKGGTGRDHLDGSSGNDSLYGNAGNDTLIGGS 286
Query: 376 GQDVFES 382
G+DV
Sbjct: 287 GRDVLNG 293
>gi|297700574|ref|XP_002827314.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-28-like
[Pongo abelii]
Length = 511
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 57/198 (28%), Gaps = 48/198 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPELAVRG------AEVRAAFQLWSNVSALEFWEAPATGPA 180
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 181 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 240
Query: 126 HEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH LGL H P P Y S+
Sbjct: 241 HEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW-------------------------- 274
Query: 185 VSDIVAVQKIYGAPKGSL 202
D++AVQ +YG P G
Sbjct: 275 -DDVLAVQSLYGKPLGGS 291
>gi|294677596|ref|YP_003578211.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|3128319|gb|AAC16171.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
gi|294476416|gb|ADE85804.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 643
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 7/146 (4%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A S G + S + G+D + G + + N + +I G
Sbjct: 123 ASATSTGQTYSGLASTSYASTVSSALVGGAGNDSIR---AGAGNDTVTGNAGND-TIDGG 178
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N ++ + + ++G +GND + G + ++ +G D G SG+D Y A S
Sbjct: 179 AGNDRLSGNDGNDLILGGAGNDTLDGGAGDDTLAGGAGADSITGGSGMDYADYSASSGAV 238
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVE 342
I + DA D L+ V+
Sbjct: 239 TIDLSRWSAAGGDAAG---DTLTSVD 261
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 11/129 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-----SSIGGYE 257
GN + +P + + + Y L + S+ S++ G
Sbjct: 99 GNTLVGYVSTSALTPGVVM------TVTGSASATSTGQTYSGLASTSYASTVSSALVGGA 152
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N +I ++V G++GND + G + N+ + GND+ G +G DT A
Sbjct: 153 GNDSIRAGAGNDTVTGNAGNDTIDGGAGNDRLSGNDGNDLILGGAGNDTLDGGAGDDTLA 212
Query: 318 IYRFENAII 326
++I
Sbjct: 213 GGAGADSIT 221
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 231 LDLTLIGGVKNYIDL--NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D + G Y ++ +I G N + + ++G SG+D + G++ N+
Sbjct: 275 FDDAVYSGSDVYTNIFYGGGGDDTIDGRGGNDILYGGDDNDLILGGSGDDSLFGDAGNDT 334
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+G D G +G DTF A S I FE ++
Sbjct: 335 LAGGAGADTLSGGAGADTFVLDAQSGADSITDFEFTMV 372
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 15/146 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--------KNYIDLNTESW 250
G G + + + + G D TL + I + +
Sbjct: 221 TGGSGMDYADYSASSGAVTIDLSRWSAAGGDAAGDTLTSVDGVIGSAYGDSLIGFDDAVY 280
Query: 251 SSIGGYEK-------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S Y + TI + + G ND+++G S ++ F +GND G +G
Sbjct: 281 SGSDVYTNIFYGGGGDDTIDGRGGNDILYGGDDNDLILGGSGDDSLFGDAGNDTLAGGAG 340
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYD 329
DT A + + + A + D
Sbjct: 341 ADTLSGGAGADTFVLDAQSGADSITD 366
>gi|85703938|ref|ZP_01035041.1| probable aggregation factor core protein MAFp3, isoform C
[Roseovarius sp. 217]
gi|85671258|gb|EAQ26116.1| probable aggregation factor core protein MAFp3, isoform C
[Roseovarius sp. 217]
Length = 1079
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 8/149 (5%)
Query: 203 GNNIYK--IEVQQKDSPFIQTIYDSG-GDDLLD-----LTLIGGVKNYIDLNTESWSSIG 254
G+++ + G G+D L+ ++ G N + IG
Sbjct: 862 GDDVMGSGFGDDSVSGGAGNDVVAGGAGNDTLEGGDGADSMSGSFGNDLIFGGAGADDIG 921
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI + V G+D V G N+ ND DG +G DT A +
Sbjct: 922 GGTGQDTIDAGAGNDQVGAGEGDDSVFGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGND 981
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + E + D ++D E
Sbjct: 982 VITGGTGADQFVFASFFEGEADVVTDFED 1010
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
++ ID + +G E + ++ + + G ND + G + N+ +GNDV
Sbjct: 926 QDTIDAGAGNDQ-VGAGEGDDSVFGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVIT 984
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
G +G D F + + + + + D + VE +
Sbjct: 985 GGTGADQFVFASFFEGEADVVTDFEDGIDSFFIRRVDPDTGVENIT 1030
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 77/256 (30%), Gaps = 47/256 (18%)
Query: 166 FMPQDSMMDASFGYCATPMVSDI---VAVQKIY----GAPKG-------------SLGNN 205
++ +DA+ G T + DI +A++ Y G + + GN+
Sbjct: 724 WLRNGEAIDAATGDSYTLLTLDIGSEIALRVAYTDGEGTNETLISSASLVAPVPGTEGND 783
Query: 206 IY---KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + + T+ DD + D ++ GG +I +
Sbjct: 784 LILAGPLGTLLEGLGGNDTLIGGDSDDTIAGGDGDDSIEGG---------GGDDNISASD 834
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVF---------FESSGNDVFDGSSGLDTFF 308
N + +SV G ND +IG ++V +GNDV G +G DT
Sbjct: 835 GNDFVDAGAGNDSVGGGIDNDTIIGGDGDDVMGSGFGDDSVSGGAGNDVVAGGAGNDTLE 894
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ F N +I A + + + + +
Sbjct: 895 GGDGADSMS-GSFGNDLIFGGAGADDIGGGTGQDTIDAGAGNDQVGAGEGDDSVFGGDGN 953
Query: 369 EDLIQVIGQDVFESMK 384
+ L D +
Sbjct: 954 DFLAGGGRNDTIDGGA 969
>gi|291567112|dbj|BAI89384.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 999
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 11/158 (6%)
Query: 191 VQKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYI 243
Q IY G Y E+ + I+ IY + G+D++ T + G +
Sbjct: 784 TQSIYNIRVRTTDSGGLTYDRELTINVN--IEPIYATEGNDIIRGTDGPNIIYGLGGSDR 841
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
I G E + + ++++G G+D + G + +++ GND+ G G
Sbjct: 842 LYGNAGDDYIDGGEGDDLLYGGDGNDTLIGGRGSDRLYGEAGDDLLDGGEGNDILYGGPG 901
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
DT S ++Y + D + D
Sbjct: 902 NDTLIGGPGSD--RLYGGPGNDLFILQEGMGSDIIYDF 937
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 50/186 (26%), Gaps = 46/186 (24%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV----------------- 239
+L N V + T D D L+ G
Sbjct: 717 PTDLTLDNTSIDENVAAGTAVGSFTTTDPDTGDTFTYELVAGTGDTDNAAFSVSGDQLLI 776
Query: 240 KNYIDLNTESWSSI-------GGYEKNMTIAQHTVIESVVGSSGNDVV------------ 280
N D T+S +I GG + + + IE + + GND++
Sbjct: 777 NNSPDFETQSIYNIRVRTTDSGGLTYDRELTINVNIEPIYATEGNDIIRGTDGPNIIYGL 836
Query: 281 ------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GN+ ++ G+D+ G G DT S + A
Sbjct: 837 GGSDRLYGNAGDDYIDGGEGDDLLYGGDGNDTLIGGRGSDRL----YGEAGDDLLDGGEG 892
Query: 335 QDFLSD 340
D L
Sbjct: 893 NDILYG 898
>gi|291405620|ref|XP_002719118.1| PREDICTED: matrix metalloproteinase 28 [Oryctolagus cuniculus]
Length = 521
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 60/199 (30%), Gaps = 50/199 (25%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H + + R A WS V L F E + +
Sbjct: 127 GNRWYKQHLSYRLVNWPEHLPESAV-------RGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGK-GTILSHNA 124
DI+ N + + F E +FD+ + W + G L
Sbjct: 180 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDRDERWSLSRRRRGRNLFVVL 239
Query: 125 LHEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL H P P Y S+
Sbjct: 240 AHEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSW------------------------- 274
Query: 184 MVSDIVAVQKIYGAPKGSL 202
D++AVQ++YG P G
Sbjct: 275 --DDVLAVQRLYGKPLGRS 291
>gi|258544121|ref|ZP_05704355.1| iron-regulated protein FrpC [Cardiobacterium hominis ATCC 15826]
gi|258520629|gb|EEV89488.1| iron-regulated protein FrpC [Cardiobacterium hominis ATCC 15826]
Length = 1082
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 1/149 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + T+ + +++ G SGND + G N+V GND G +G DT A
Sbjct: 510 TIHGGAGDDTLYGYGGNDTLHGDSGNDGLSGGYGNDVLHGGEGNDHLYGEAGHDTLDGGA 569
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ +E+ ++ K AD ++++ + Y+ +
Sbjct: 570 GDDQLEGGIYESDTYLFRTGHGKDTVTDYARNDEQADTLRFEGAQAEKAVFAH-EGYDLV 628
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFD 400
++ G D ++K ++ +E FD
Sbjct: 629 VKAYGGDDRVTLKDYFISSSNERYHFQFD 657
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 25/209 (11%)
Query: 207 YKIEVQQKDSPFI-----QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + + + I+ GDD L G N ++ G N
Sbjct: 671 FDFTGTENNDRLVGWYSDDAIHGGAGDDTL----YGYDGND---------TLHGDSGNDG 717
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
++ + + G G+D + G+S ++V + GND G +G DT A +
Sbjct: 718 LSGGDGNDVLHGGEGDDSLGGDSGDDVLHGNEGNDHLYGRAGHDTLDGGAGDDHLEGGAV 777
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS---YEDLIQVIGQD 378
E+ + A K V+ + D+ D++ + + + Y+ +++ G D
Sbjct: 778 ESDTYQFRAGHGKDT----VKDYGYNDEQADTLRFEGAQAEKAAFAREGYDLVVKAYGGD 833
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGS 407
++K ++ ++ FD + +
Sbjct: 834 DRVTLKDYFFSSTNDRYHFQFDDATFKAA 862
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 7/151 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + + + G G+D + G+S ++V + GND G +G DT A
Sbjct: 331 LYGDKGNDALNGGDGNDVLHGGEGDDSLGGDSGDDVLHGNEGNDHLYGGAGHDTLDGGAG 390
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS---YE 369
+ E+ + A H +D ++D D+ D++ K + + Y+
Sbjct: 391 DDHLEGGDVESDTYQFRAG-HGKDTVTD---YAHNDEQADTLRFKGAQAEKAAFAREGYD 446
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+++ G D ++K ++ + FD
Sbjct: 447 LVVKAYGGDDRVALKDYFYGDNYSRYNFHFD 477
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 15/161 (9%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G G+D + GN+ N + GND +G G D ++
Sbjct: 314 IGKDGDDTLRGNNNANYLYGDKGNDALNGGDGNDVLHGGEGDDSL----GGDSGDDVLHG 369
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSI----LEYTASY-EDLIQVIGQDVFESMKHF 386
D L D +++ + ++ A + +D + + ++
Sbjct: 370 NEGNDHLYGGAGHDTLDGGAGDDHLEGGDVESDTYQFRAGHGKDTVTDYAHNDEQADTLR 429
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
++ +E + YD + +G D A + Y
Sbjct: 430 FKGAQAE------KAAFAREGYDLVVKAYGGDDRVALKDYF 464
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 15/162 (9%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH--- 333
ND + G +++ +G+D G G DT + + + + + N+H
Sbjct: 499 NDYLQGWYSDDTIHGGAGDDTLYGYGGNDTLHGDSGNDGLSGGYGNDVLHGGEGNDHLYG 558
Query: 334 --KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D ++ + + L T +D + ++ ++ +E
Sbjct: 559 EAGHDTLDG----GAGDDQLEGGIYESDTYLFRTGHGKDTVTDYARNDEQADTLRFEGAQ 614
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+E F Y D + +G D + Y E
Sbjct: 615 AE--KAVFAHEGY----DLVVKAYGGDDRVTLKDYFISSSNE 650
>gi|116872|sp|P23097|MMP13_RAT RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; AltName:
Full=UMRCASE; Flags: Precursor
gi|203499|gb|AAA72124.1| collagenase [Rattus norvegicus]
Length = 466
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 63/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T +E+ ++ R A WS V L F +
Sbjct: 104 RTLKWSQTNLTYRIVNYT---PDISHSEV----EKAFRKAFKVWSDVTPLNFTRIHDGTA 156
Query: 78 DIKFISSN------NGYVCTPRYDSRYFM-------EINFDKADVWRYGIGKGTILSHNA 124
DI + + F + +FD + W KG L A
Sbjct: 157 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGGDAHFDDDETWT-SSSKGYNLFIVA 215
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE+GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 216 AHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 273
Query: 181 ATPMVSD 187
TP D
Sbjct: 274 KTPEKCD 280
>gi|291520013|emb|CBK75234.1| Uncharacterized vancomycin resistance protein [Butyrivibrio
fibrisolvens 16/4]
Length = 290
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 44/125 (35%), Gaps = 16/125 (12%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y Y +L D+ HY G+ EGRN A F A +Y+ + DL+ +
Sbjct: 48 VFDGAYYAAMYPNLAQQANGDQLWLLMHYAYCGINEGRNASATFNATDYMNKNPDLVAVY 107
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD------------DLRNVFGSDRG 504
D H+ G EGR T + + D G++
Sbjct: 108 GDYMPAYAF---HYVYAGRLEGRDATPTVGADVEAVSTMKLLGVYSTEFDPEAARGTNIQ 164
Query: 505 AAARH 509
AA H
Sbjct: 165 IAASH 169
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRG 420
Y A Y +L Q D + H+ G++EGR+ TF++ Y+ DL V+G
Sbjct: 53 YYAAMYPNLAQQANGDQLWLLMHYAYCGINEGRNASATFNATDYMNKNPDLVAVYGDYMP 112
Query: 421 AAARHYITHGVKEGRNPDA 439
A A HY+ G EGR+
Sbjct: 113 AYAFHYVYAGRLEGRDATP 131
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 10/118 (8%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDD 578
F Y A + +L A+ L H++ G EGR S TFN Y+ D
Sbjct: 46 SKVFDGAYYAAMYPNLAQQ-ANGDQLWL--LMHYAYCGINEGRNASATFNATDYMNKNPD 102
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGIS-GMQFKSVMNLSEKSRDKADLSLSFDHK 635
L V+G A A HY+ G EGR + G ++V + S FD +
Sbjct: 103 LVAVYGDYMPAYAFHYVYAGRLEGRDATPTVGADVEAVSTMKLL----GVYSTEFDPE 156
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRN 497
F Y A + +L A H++ G EGR TF++ Y+ DL
Sbjct: 49 FDGAYYAAMYPNLA---QQANGDQLWLLMHYAYCGINEGRNASATFNATDYMNKNPDLVA 105
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA 523
V+G A A HY+ G EGR+
Sbjct: 106 VYGDYMPAYAFHYVYAGRLEGRDATP 131
>gi|71736991|ref|YP_273097.1| calcium binding hemolysin protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557544|gb|AAZ36755.1| calcium binding hemolysin protein, putative [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 5107
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ ID + ++ G N +++ T +++ G GND++ G S N+V +GNDV
Sbjct: 3254 ASDDVID-GSGGDDTLNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGSGNDVLNGGAGNDV 3312
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
DG +G D A +Y + ++Y ANE + + ++ + I
Sbjct: 3313 LDGGAGNDRLDGGAGDDIYLFGKGSGQDVIYYANEARTGKVDTIQLVGLNAGDISISRAG 3372
Query: 358 QRSILE 363
+L
Sbjct: 3373 YDLVLR 3378
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 2/153 (1%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G N + ++ G N T++ + + G +GND++ G ++N+ +
Sbjct: 4721 DETLSGTSGNDVISAGAGDDTVNGGSGNDTLSGGAGADMLNGDAGNDLLQGGASNDTLYG 4780
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQ 349
GNDV DG +G D Y + +Y ANE + L V+ L +D
Sbjct: 4781 GDGNDVLDGGAGNDQLNGGDGDDTYLFGKGAGQDTIYYANEARVGKLDTVKLADLNVSDV 4840
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I + + T ++ +D
Sbjct: 4841 SITRDSSDLLIRVNGTTDNLRVMNHFAEDATSG 4873
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D + ID +I G N T+ + +++ G GND++ G + N
Sbjct: 3807 GNDADQYLAGYATDDLID-AGGGDDTINGAAGNDTLIGGSGADTLSGEEGNDLLQGGAGN 3865
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
++ +GNDV DG +G D A Y + +Y ANE
Sbjct: 3866 DILNGGAGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANE 3911
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+T+ +GG+D++D G + I+ G N T+ + +++ G GNDV
Sbjct: 4540 ETLSGTGGNDVID---AGAGDDVIN----------GAAGNDTLTGNAGADTLNGGEGNDV 4586
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
++G + N+ GND DG +G D Y + +Y A E+++ L
Sbjct: 4587 LLGGAGNDSLSGGVGNDSLDGGAGNDQLDGGEGDDTYLFGKGAGQDTIYYAYENREGKL 4645
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 13/157 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + T+Y + G+D L G + + + + G N
Sbjct: 3435 YGTDDLIEAGAGDDTVYGAAGNDKL----FGNSGDDVVNGDDGDDLVQGGSGN------- 3483
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G +GNDV+ G + N++ +GND+ DG +G D A Y +
Sbjct: 3484 --DTLNGGAGNDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDTYLFGKGSGQDT 3541
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+Y ANE + + ++ + I ++
Sbjct: 3542 IYYANETRAGKVDTIQLVGLGAADISVSRDGSDLVIR 3578
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D DL I G N +A +++ G GND++ G S N+
Sbjct: 3627 DADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLAGGAGADTLSGDEGNDLLQGGSGNDTL 3686
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY---DANEHKQDFLSDV 341
+G+DV DG++G D A Y + +Y +A K D + V
Sbjct: 3687 TGGAGDDVLDGAAGNDRLDGGAGDDTYLFGKGSGQDTLYYVNEARAGKVDTIQLV 3741
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 14/191 (7%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA----SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+N + +V YF A F T + I A+ + +N++
Sbjct: 825 KNSTDKITVAGYFQNDGITPYALEQIRFADGTTWNLDQIKALSIL----TTDGNDNVWGY 880
Query: 210 EVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
K ++ G+D L G Y + + S G E +
Sbjct: 881 ASDDILKGGAGADSLSGEAGNDAL-FGEDGNDSLYGGVGADQLS---GGEGGDYLTGGDG 936
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++++G +GND + G+S N++ +GND G G D + + I ++++
Sbjct: 937 NDTLLGDAGNDTLYGDSGNDLLEGGTGNDYLIGGEGSDVYRFNRGWGQDSINNYDSSAGK 996
Query: 328 YDANEHKQDFL 338
DA E D L
Sbjct: 997 TDAIEFAADIL 1007
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + G V N DLN + S++ +TI E++ G +G+D + GN +
Sbjct: 3073 GIDQIQFA-DGVVWNKDDLNA-NLSTVVPVSS-LTITGTEANETLTGGAGHDTLYGNGGD 3129
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++ +GND DG G DT+ + S + ++ D
Sbjct: 3130 DILEGGAGNDRLDGGYGNDTYVFGKGSGQDTVLAYDPVSTRVDV 3173
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G ++ I+ + G GND + G + N+ + +GNDV +G +G D+
Sbjct: 4923 TVSGGAGKDSLYGGKGIDMLYGEEGNDRLYGEAGNDTLYGGAGNDVLNGGTGNDSLAGGD 4982
Query: 312 PSYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFAD 348
S Y+ ++ + + D L + D
Sbjct: 4983 GSDTYEFNIGSGRDVINNYDVSGGTDALQFGTDVSLED 5020
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N T++ + +++ G GNDV+ G + + +GND DG +G D
Sbjct: 4195 SVNGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKDSLYGGNGNDQLDGGAGNDMLDGGN 4254
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + +Y A E + D L V+ + + ++ + + L
Sbjct: 4255 GDDTYLFGKGSGQDSIYYAYEGRADKLDTVKLIDLNAADVSVRRDGNDLLIRVLGTTDSL 4314
Query: 372 IQVIGQDVFE 381
V
Sbjct: 4315 RVVAHFTNDA 4324
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 15/120 (12%)
Query: 221 TIYD-----------SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI+D + G+D + + + N + G N + +
Sbjct: 1629 TIWDRAHITAALLDGTDGNDTITGYDTADTLSGLAGNDT----LNGRNGNDLLDGGDGKD 1684
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G +G+D ++G + N+ GND DG +G D+ S Y + IVY+
Sbjct: 1685 SLNGEAGDDFLLGGAGNDTLSGGEGNDTLDGGTGNDSLEGGIGSDTYIFRKGSGQDIVYN 1744
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D + + + G L + I + TI ++++G SG D + G
Sbjct: 3796 GQDTIKIQALLGNDADQYLAGYATDDLIDAGGGDDTINGAAGNDTLIGGSGADTLSGEEG 3855
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
N++ +GND+ +G +G D A + ++ + + + ++
Sbjct: 3856 NDLLQGGAGNDILNGGAGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYAN 3910
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 5/137 (3%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ Y + Q T++D L G + I + + G E + +
Sbjct: 1797 DQTYGYAINQLQFADG-TVWDQAKITSALLIGTEGSDSII--GYATADELAGLEGDDVLN 1853
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G D + G + GND +G +G DT A + + +
Sbjct: 1854 GRAGDDLLSGGEGRDTLNGEDGADTLLGGLGNDTLNGGAGNDTLDGGAGND--SLEGGKG 1911
Query: 324 AIIVYDANEHKQDFLSD 340
+ QD +S+
Sbjct: 1912 SDTYIYRKGSGQDTISN 1928
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + +++ G GND ++G + N+ GND+ DG SG D
Sbjct: 2220 LSGRTGNDLLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFG 2279
Query: 313 SYLYKIYRFENAIIVYD 329
S Y R + +
Sbjct: 2280 SDTYVFRRGAGQDTISN 2296
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 36/91 (39%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+KN + +++ ++ G N I + + G++GND + GN+ +
Sbjct: 4522 FWDQSAIKNQVLQGSDADETLSGTGGNDVIDAGAGDDVINGAAGNDTLTGNAGADTLNGG 4581
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
GNDV G +G D+ + +
Sbjct: 4582 EGNDVLLGGAGNDSLSGGVGNDSLDGGAGND 4612
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +A ++++G++ ND + G+S N+ +GND G G D + +
Sbjct: 724 GEAGNDYLAGGEGNDTLLGNADNDTLYGDSGNDELDGGAGNDYLTGGDGSDVYRFSRGWG 783
Query: 315 LYKIYRFENAIIVYDANEHKQDFL 338
I ++++ DA E D L
Sbjct: 784 QDSISNYDSSAEKTDAIEFAPDIL 807
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I GDD+L + + G ++ + S ++ G T++ + + + G GND++
Sbjct: 1087 IVGGMGDDVL--SGLAGND-VVNGDEGSD-TLYGGTGQDTLSGGSGSDYLYGEEGNDLLA 1142
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN+ +++ + + GND+ DG +G DT S +Y+ + + + N + + V
Sbjct: 1143 GNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIYRFAKGYGQDSI-NNNSYGETATDKV 1201
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFG 390
+ ++ + + Y +S + +IQ+ D HF + G
Sbjct: 1202 DAIQLDG-------LNSADLRFYRSSDDLVIQIKATGDTLTVRSHFSQDG 1244
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 2/130 (1%)
Query: 244 DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
DL + G + +S+ G G+D + G + N+ SGNDV DG
Sbjct: 4003 DLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSGNDVLDGG 4062
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G D A Y + +Y ANE + + V+ + + +
Sbjct: 4063 AGNDRLDGGAGDDTYLFGKGSGQDTIYYANESRAGKVDQVKLVDLNAADVSVARDGYDLV 4122
Query: 362 LEYTASYEDL 371
+ + + L
Sbjct: 4123 IRILGTTDTL 4132
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + + +++ G GND ++G + N+ G+DV DG SG D+
Sbjct: 1297 SLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGNDSLNGGYGDDVLDGGSGNDSLDGGY 1356
Query: 312 PSYLYKIYRFENAIIVYDA 330
S Y + + +
Sbjct: 1357 GSDTYVFRKGSGQDTISNG 1375
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + N +++ + + G +G D + G N+ +GND +G G D +
Sbjct: 1288 SLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGNDSLNGGYGDDVLDGGS 1347
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + + QD +S+
Sbjct: 1348 GNDSLDGGYGSDTYVFRKGS--GQDTISN 1374
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + +I+ + ++++G SGND++ G ++ G D G G DT A
Sbjct: 2745 LTGTEGDESISGYDSADNLLGLSGNDLLYGLQGDDTLKGGDGRDTLSGGDGNDTLDGGAG 2804
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + + + + + D + ++V
Sbjct: 2805 NDSLDGGYGSDTYVFRKGSGQDT-----INNYSYNDTTVGKLDV 2843
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 13/121 (10%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDV 279
T++ G D + +L+ G + L I G N T++ +++ G +G D
Sbjct: 1444 TVW---GVDQIKASLLTGGEFNDTLTGYDTDDILEGLVGNDTLSGGLGNDTLRGGAGRDT 1500
Query: 280 VIGNSANNVFFESS---------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ + + G+DV DG +G DT S Y + + + ++
Sbjct: 1501 LYGDDGADTLLGGADNDSLAGGNGDDVLDGGTGNDTLEGGKGSDTYIFAKGAGSDAIDNS 1560
Query: 331 N 331
+
Sbjct: 1561 S 1561
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
TE+ ++ G + I +SV G SGND + G S + GNDV +G G D+
Sbjct: 4172 TEADETLSGTGSDDVIYAAAGDDSVNGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKDS 4231
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + D +L
Sbjct: 4232 LYGGNGNDQLD---GGAGNDMLDGGNGDDTYLFG 4262
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND ++G + N+ GNDV DG +G DT S Y + + +
Sbjct: 2053 TLNGEDGNDTLLGGAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGKGYGRDTISN 2112
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + + + ID ++ G + T++ +++ G +G+D+++G N
Sbjct: 4353 GTDADETLAGTAISDSIDAGAGDD-TVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMGN 4411
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV---YDANEHKQDFLSDVE 342
+ GND+ DG +G D Y R V Y++ K D + E
Sbjct: 4412 DTLNGGLGNDILDGGAGNDRLDGGDGDDTYLFARGAGQDTVYYAYESRIGKLDTVKLTE 4470
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + +I + + V G GND++ G + N++ G D +G G DT A +
Sbjct: 2195 GAESDDSITGYASDDRVSGGDGNDILSGRTGNDLLEGGRGKDTLNGEEGNDTLLGGAGND 2254
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ N I+ + D + F
Sbjct: 2255 TLN-GGYGNDILDGGSGNDALDGGFGSDTYVF 2285
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 37/102 (36%), Gaps = 1/102 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +A + + + G +G+D ++G + N+ +G D G G D +
Sbjct: 3623 LQGSDADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLAGGAGADTLSGDEGNDLLQGGSG 3682
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + ++ A + D + + F
Sbjct: 3683 NDTLT-GGAGDDVLDGAAGNDRLDGGAGDDTYLFGKGSGQDT 3723
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND+ DG +G D+ S Y + I+ +
Sbjct: 2421 TLYGEDGNDTLQGGAGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTYVFRKGSGQDIISN 2480
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND ++G S + GND+ DG SG D+ S Y + + +
Sbjct: 2605 TLYGEEGNDTLLGGSGYDTLSGGYGNDLLDGGSGNDSLDGGFGSDTYVFRKGSGQDSISN 2664
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 34/95 (35%), Gaps = 3/95 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ + G+ + I +++ G +G D ++G + G+D +G +G D
Sbjct: 3989 RSDAAQVLTGFASDDLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGND 4048
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + + D +L
Sbjct: 4049 SLAGGSGND---VLDGGAGNDRLDGGAGDDTYLFG 4080
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 25/163 (15%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN------------------SANNVFFESSG 294
+ GY + I ++V G++GND + GN S N+ +G
Sbjct: 3432 LEGYGTDDLIEAGAGDDTVYGAAGNDKLFGNSGDDVVNGDDGDDLVQGGSGNDTLNGGAG 3491
Query: 295 NDVFDGSSGLDTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
NDV DG +G D A + ++ QD + R
Sbjct: 3492 NDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANETRAG 3551
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + + + DL+ + ++ G
Sbjct: 3552 KVDTIQLVGLGAADISVSRDGSDLVIRVNGTTDSLRVVYHFAG 3594
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 12/141 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY + I + + G +GNDVV G+ ++ + +G D G SG D +
Sbjct: 1078 LTGYASDDRIVGGMGDDVLSGLAGNDVVNGDEGSDTLYGGTGQDTLSGGSGSDYLYGEEG 1137
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFL---SDVERLRFADQCIDSVNVKQRSILEY 364
+ L + + D N+ D L + RFA + Y
Sbjct: 1138 NDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIYRFAKGY----GQDSINNNSY 1193
Query: 365 TASYEDLIQVIGQDVFESMKH 385
+ D + I D S
Sbjct: 1194 GETATDKVDAIQLDGLNSADL 1214
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + +D++ ++ ++GND G SG DT + L + N I+ A
Sbjct: 3816 GYATDDLIDAGGGDDTINGAAGNDTLIGGSGADTLSGEEGNDLLQ-GGAGNDILNGGAGN 3874
Query: 333 HKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D + +RL D + + Y + E + Q +
Sbjct: 3875 DVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYY--ANETRAGKVDQVKLVGLNAADVSV 3932
Query: 391 LSEGRDIT 398
+ EG D+
Sbjct: 3933 VREGYDLV 3940
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 7/124 (5%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+++ G + +D ++G ++V +GNDV +G G DT +
Sbjct: 1068 AFTFTDGNDALTGYASDDRIVGGMGDDVLSGLAGNDVVNGDEGSDTLYGGTGQDTLS--- 1124
Query: 321 FENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ Y E D L+ + L AD L+ + G
Sbjct: 1125 -GGSGSDYLYGEEGNDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIYRFAKGY 1183
Query: 378 DVFE 381
Sbjct: 1184 GQDS 1187
Score = 44.7 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIYRFE 322
++ + GND V G + +++ S G+D G +G DT A + + +
Sbjct: 686 LITTEGNDNVWGYATDDILSGSLGDDRLSGEAGDDTLLGEAGNDYLAGGEGNDTLLGNAD 745
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQC 350
N + D+ + D + + L D
Sbjct: 746 NDTLYGDSGNDELDGGAGNDYLTGGDGS 773
Score = 44.3 bits (103), Expect = 0.070, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 49/153 (32%), Gaps = 10/153 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ G + I S+ + + + GS ++ + G N+V
Sbjct: 4504 NDATYGYQIDRIQFADGSFWDQSAIKNQV----------LQGSDADETLSGTGGNDVIDA 4553
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G+DV +G++G DT A + + ++ N+ + + A
Sbjct: 4554 GAGDDVINGAAGNDTLTGNAGADTLNGGEGNDVLLGGAGNDSLSGGVGNDSLDGGAGNDQ 4613
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L + +D I ++ +
Sbjct: 4614 LDGGEGDDTYLFGKGAGQDTIYYAYENREGKLD 4646
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 33/120 (27%), Gaps = 12/120 (10%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS + + G + +++ +G+D G +G D A + +
Sbjct: 3625 GSDADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLAGGAGADTLS----GDEGNDLLQGG 3680
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L+ D V D + G+ + ++ +
Sbjct: 3681 SGNDTLTG--------GAGDDVLDGAAGNDRLDGGAGDDTYLFGKGSGQDTLYYVNEARA 3732
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 76/238 (31%), Gaps = 26/238 (10%)
Query: 194 IYGAPKGSLG--NNIYKIEVQQKDSPFIQTIYD-----SGGDDLLDLTLIGGVKNY---- 242
IY A + G + I + + D + YD +G D L +
Sbjct: 3342 IYYANEARTGKVDTIQLVGLNAGDISISRAGYDLVLRVNGTTDSLRVVYHFLSDATSGYQ 3401
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
ID + +I G E ++A + G+ + + G +++ +G+D G++
Sbjct: 3402 IDRIQFADGNIWGQETIKSLA-------LQGTDADQYLEGYGTDDLIEAGAGDDTVYGAA 3454
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D F + + ++ + N+ + + L +L
Sbjct: 3455 GNDKLFGNSGDDVVNGDDGDDLVQGGSGNDTLNGGAGN-DVLDGGTGNDILNGGAGNDLL 3513
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ A + L G D Y FG G+D + + D + G
Sbjct: 3514 DGGAGNDRLDGGAGDDT-------YLFGKGSGQDTIYYANETRAGKVDTIQLVGLGAA 3564
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G ++ + GND G +G D + + ++ D
Sbjct: 1278 DTLTGYASADSLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLL----GRAGNDS 1333
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
L+ + D +D + Y + + GQD
Sbjct: 1334 LNG----GYGDDVLDGGSGNDSLDGGYGSDTYVFRKGSGQDTIS 1373
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 53/195 (27%), Gaps = 29/195 (14%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYI-----DLNTESWSSIGGY 256
G++ Y + G D + LT + + DL S
Sbjct: 4619 GDDTYLFGKGAGQDTIYYAYENREGKLDTIKLTDLNASDVSVRRDGNDLIIRVLGSTDSL 4678
Query: 257 EKNMTI----AQHTVIESVVGSSGN---------DVVIGNSANNVFFESSGNDVFDGSSG 303
A I+ +V + G+ V+ G+ ++ +SGNDV +G
Sbjct: 4679 RVVYHFQSDAAGGYQIDRLVFADGSVWDQTQIKSQVLQGSDSDETLSGTSGNDVISAGAG 4738
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + A + D L +L+
Sbjct: 4739 DDTVNGGSGNDTLS----GGAGADMLNGDAGNDLLQG------GASNDTLYGGDGNDVLD 4788
Query: 364 YTASYEDLIQVIGQD 378
A + L G D
Sbjct: 4789 GGAGNDQLNGGDGDD 4803
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 53/179 (29%), Gaps = 27/179 (15%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV-------VGSSGNDVV 280
DDLL G I + S G + A T+ + +G+ +D +
Sbjct: 1959 DDLLIQIRQTGETLRISSHFTVDQSYGYAINQLQFADGTLWDEAQITAALLIGTESDDSI 2018
Query: 281 IGNSANNVFFESSGND------------------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
G ++ + GND +G G DT A +
Sbjct: 2019 TGYASGDKLSGLVGNDILSGRGGDDVLDGGDGKDTLNGEDGNDTLLGGAGNDSLS-GGIG 2077
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N ++ A D + F + + + + T D+I++ G +
Sbjct: 2078 NDVLDGGAGNDTLDGGKGSDTYVF-GKGYGRDTISNYAYNDTTVDKLDVIRLEGLTSED 2135
>gi|47168806|pdb|1RM8|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-16MT3-
Mmp: Characterization Of Mt-Mmp Specific Features
Length = 169
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 60/201 (29%), Gaps = 55/201 (27%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI---- 75
Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 1 GQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSELE 53
Query: 76 ----------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGK-- 116
H D G++ + + +FD + W G
Sbjct: 54 NGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHD 113
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
G L A+HE+GHALGL H +M+ F +
Sbjct: 114 GNDLFLVAVHELGHALGLEHSNDPTA-------------------IMAPFYQYMETDNFK 154
Query: 177 FGYCATPMVSDIVAVQKIYGA 197
D+ +QKIYG
Sbjct: 155 ------LPNDDLQGIQKIYGP 169
>gi|6678896|ref|NP_032633.1| collagenase 3 preproprotein [Mus musculus]
gi|461764|sp|P33435|MMP13_MOUSE RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|53604|emb|CAA47102.1| procollagenase [Mus musculus]
gi|74144340|dbj|BAE36033.1| unnamed protein product [Mus musculus]
gi|74178022|dbj|BAE29805.1| unnamed protein product [Mus musculus]
gi|74196011|dbj|BAE30561.1| unnamed protein product [Mus musculus]
gi|74204845|dbj|BAE35483.1| unnamed protein product [Mus musculus]
gi|74220177|dbj|BAE31273.1| unnamed protein product [Mus musculus]
gi|74225324|dbj|BAE31593.1| unnamed protein product [Mus musculus]
gi|116138461|gb|AAI25323.1| Matrix metallopeptidase 13 [Mus musculus]
gi|116138812|gb|AAI25321.1| Matrix metallopeptidase 13 [Mus musculus]
gi|148692985|gb|EDL24932.1| matrix metallopeptidase 13 [Mus musculus]
Length = 472
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 61/193 (31%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T +E+ ++ R A WS V L F +
Sbjct: 110 RTLKWSQTNLTYRIVNYT---PDMSHSEV----EKAFRKAFKVWSDVTPLNFTRIYDGTA 162
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFIVA 221
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H + + +Y M+
Sbjct: 222 AHELGHSLGLDHSKDPGA---------------LMFPIYTYTGKSHFMLP---------- 256
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 257 DDDVQGIQFLYGP 269
>gi|123441718|ref|YP_001005702.1| putative serine protease [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088679|emb|CAL11481.1| putative serine protease [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 1803
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 10/153 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA--QHTV 267
V K T+ GG+D+L G KN I + G + + A Q ++
Sbjct: 667 SVFIKGGKGNATLVGGGGNDVL---AGGSGKNLIIGGSGKAVIYAGSQGDTLYASEQGSI 723
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I G D + GN ++V G+ DG G++ + Y I R ++ +
Sbjct: 724 I---YAGGGADRIYGNEGHDVIEAGHGDAQIDGGGGINLVALHGSYADYTITRTDSGFQI 780
Query: 328 YD--ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
D A L ++++L FAD +N
Sbjct: 781 RDKVAGRDGTLALKNIQKLNFADISAVDLNTNN 813
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 91/251 (36%), Gaps = 41/251 (16%)
Query: 158 FLTSVMS--YFMPQDSMM------DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY-- 207
F + MS Y + DA G + +++G G +++Y
Sbjct: 1366 FNYTFMSTHYRGEDSTGQWKLVVKDAKEGLPIKLNRWSL----RLFGHKTG--ADDVYFY 1419
Query: 208 --KIEVQQKDSPFIQTIYDS-----GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ Q + P + D+ GG + L+ I G I+L T +++GG +
Sbjct: 1420 TDEFAAQVAEQPTRAILNDAINGVAGGRNTLNAAAISGA-VKINLVTGE-ANLGGTT--L 1475
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-YAPSYLYKIY 319
TI I ++V GNDV+ N++ G + +G +G + F P +I
Sbjct: 1476 TINSPQTIHNIVSGDGNDVLTAGRNNSLLDGGRGRNTLEGGAGKEIFVVRKRPQGHDRII 1535
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
FE D + + FA++ + ++QR + I IG
Sbjct: 1536 NFEA------------DKREVINLVGFAEKGFSELRLQQRRGDVQIKLADGQIITIGGQQ 1583
Query: 380 FESM-KHFYEF 389
++ H + F
Sbjct: 1584 VAALQAHHFNF 1594
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 13/163 (7%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ G + T Y++L ++ A + ++ G G+D + +
Sbjct: 537 DADGALIHSATGETTTTAYVELT---------NSGDVLFADELKVNNIYGGHGDDRLSAS 587
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSD 340
++ + G++ + G++G D F A I V A + S
Sbjct: 588 ASGSWLVGRGGSNTYIGNTGDDVFVISASDDTNNIKGNGGRDTVLIAGKKGVALNMARSG 647
Query: 341 VERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++ D I ++ L+ G DV
Sbjct: 648 ITIVQGGDGDDIIVSGGNNSVFIKGGKGNATLVGGGGNDVLAG 690
Score = 44.7 bits (104), Expect = 0.050, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 54/199 (27%), Gaps = 42/199 (21%)
Query: 204 NNIYKIEVQQKDSPFIQTIY--DSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGG 255
NNIY + S + GG + D+ +I + ++ G
Sbjct: 573 NNIYGGHGDDRLSASASGSWLVGRGGSNTYIGNTGDDVFVISASDDTNNIKG------NG 626
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANN-------------------VFFESSGND 296
+ IA + + SG +V G ++ GND
Sbjct: 627 GRDTVLIAGKKGVALNMARSGITIVQGGDGDDIIVSGGNNSVFIKGGKGNATLVGGGGND 686
Query: 297 VFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
V G SG + A S +Y E I+Y D + E +
Sbjct: 687 VLAGGSGKNLIIGGSGKAVIYAGSQGDTLYASEQGSIIYAG--GGADRIYGNEGHDVIEA 744
Query: 350 CIDSVNVKQRSILEYTASY 368
+ + A +
Sbjct: 745 GHGDAQIDGGGGINLVALH 763
>gi|327269114|ref|XP_003219340.1| PREDICTED: stromelysin-1-like [Anolis carolinensis]
Length = 507
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 65/194 (33%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK- 80
W + Y T DI + A WS+V LTF + +DI+
Sbjct: 138 WGVKDLTYSIQNYTQKMEPADI-------DDAIERAWKMWSEVTPLTFTRVYNGSADIRI 190
Query: 81 -FISSNNGYV---------CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
F++ N+G + + + E++F+ VW + G A HE GH
Sbjct: 191 SFVTGNHGDIRPFQKGDNQLAHAFSPAFGGEVHFNDDIVWTKDLA-GINFFIVAAHEFGH 249
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDI 188
+LGL H S L ++M T + DI
Sbjct: 250 SLGLYHS-------------------SVLKALM--------FALYPTTDPKTLRLHKDDI 282
Query: 189 VAVQKIYGAPKGSL 202
+Q +YG P+ +
Sbjct: 283 KGIQSLYGTPEVNT 296
>gi|170742090|ref|YP_001770745.1| hypothetical protein M446_3945 [Methylobacterium sp. 4-46]
gi|168196364|gb|ACA18311.1| hypothetical protein M446_3945 [Methylobacterium sp. 4-46]
Length = 547
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 46/155 (29%), Gaps = 43/155 (27%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------------FK 441
FD Y Y D ARH+ G +EGR P+A F
Sbjct: 24 FDPDFYARRYLD---ARALSPEERARHFAVTGRREGRAPNAEVFLHRLAAHYGPPEPDFD 80
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG----------- 490
Y DL FA + + H+ G EGR +L
Sbjct: 81 LAFY-RRQPDLAEVFAQDWEFLA----HYLERGRGEGRPRNVADHLARLERAHGPLGPHF 135
Query: 491 ------SYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+DL +F D H++ G EGR
Sbjct: 136 EIDAYRRNEDLALLF-DDEWQFVAHFLQWGRAEGR 169
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 45/163 (27%), Gaps = 43/163 (26%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--------------- 398
+ Y Y D E +HF G EGR
Sbjct: 19 AGEEAFDPDFYARRYLD---ARALSPEERARHFAVTGRREGRAPNAEVFLHRLAAHYGPP 75
Query: 399 ---FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA-------- 447
FD Y DL VF D HY+ G EGR + L +
Sbjct: 76 EPDFDLAFYRRQ-PDLAEVFAQDWE-FLAHYLERGRGEGRPRNVADHLARLERAHGPLGP 133
Query: 448 --------SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+EDL F D V HF +G EGRF
Sbjct: 134 HFEIDAYRRNEDLALLFDDEWQFVA----HFLQWGRAEGRFFR 172
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 55/151 (36%), Gaps = 35/151 (23%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH-----EDL- 536
FD Y Y D R + +R ARH+ G +EGR P+A L +A+H D
Sbjct: 24 FDPDFYARRYLDARALSPEER---ARHFAVTGRREGRAPNAEVFLHRLAAHYGPPEPDFD 80
Query: 537 INAFADAPDLVQ------AGKDHFSNFGYEEGRS------------------ITFNPDLY 572
+ + PDL + H+ G EGR F D Y
Sbjct: 81 LAFYRRQPDLAEVFAQDWEFLAHYLERGRGEGRPRNVADHLARLERAHGPLGPHFEIDAY 140
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+DL +F D H++ G EGR
Sbjct: 141 -RRNEDLALLF-DDEWQFVAHFLQWGRAEGR 169
>gi|38645|emb|CAA34731.1| leukotoxin [Aggregatibacter actinomycetemcomitans]
Length = 1055
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Query: 200 GSLGNN-IYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G++ IY + + I+ G+D L GG N + + G
Sbjct: 740 GHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKL----YGGAGNDRLFGEYGNNYLDGG 795
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E + + + + G SGND + GN +++ G+D G G D + Y +
Sbjct: 796 EGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGEGDDQLAGGEGNDIYVYRKEYGHH 855
Query: 317 KIYRFENA 324
I
Sbjct: 856 TITEHSGD 863
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + G +GND + G NN G+D +G +G D +
Sbjct: 756 LYGDNGNDEIHGGQGNDKLYGGAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSG 815
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ F N D L+ E
Sbjct: 816 NDKL----FGNQGDDLLDGGEGDDQLAGGE 841
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 10/141 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N H + + G G+D + G++ N+ GND G +G D F
Sbjct: 729 FYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYGGAGNDRLFGEYG 788
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ Y + + D L + +L+ + L
Sbjct: 789 NN----YLDGGEGDDHLEGGNGSDILRG------GSGNDKLFGNQGDDLLDGGEGDDQLA 838
Query: 373 QVIGQDVFESMKHFYEFGLSE 393
G D++ K + ++E
Sbjct: 839 GGEGNDIYVYRKEYGHHTITE 859
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 15/135 (11%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+L + Y IY GDD L G N I G +
Sbjct: 723 STLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRL----YGDNGND---------EIHGGQ 769
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + + G GN+ + G ++ +G+D+ G SG D F L
Sbjct: 770 GNDKLYGGAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLD 829
Query: 318 IYRFENAIIVYDANE 332
++ + + N+
Sbjct: 830 GGEGDDQLAGGEGND 844
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 14/147 (9%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I T+ + GS NDV G+ +++ + G+D G +G D + +
Sbjct: 720 IIGSTLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKL----Y 775
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A E+ ++L E IL + + L G D+ +
Sbjct: 776 GGAGNDRLFGEYGNNYLDGGE------GDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLD 829
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + EG DI Y+Y Y
Sbjct: 830 GGEGDDQLAGGEGNDI----YVYRKEY 852
>gi|300692780|ref|YP_003753775.1| rtx family calcium-binding cytotoxins and bacteriocins protein
[Ralstonia solanacearum PSI07]
gi|299079840|emb|CBJ52517.2| putative rtx family calcium-binding cytotoxins and bacteriocins
protein [Ralstonia solanacearum PSI07]
Length = 1253
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 5/199 (2%)
Query: 191 VQKIYGAPKGSLG----NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-KNYIDL 245
+ ++YGA LG + + + + ++ + G ++ + G N
Sbjct: 614 LHRLYGATLNGLGWNGADQVRSLLQRAVSEAPVREAFSVTGFEVFAASATSGTENNDAFA 673
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ N + +++ G +G+DV+ G N++ + G D DG +G D
Sbjct: 674 GDAGANTFNAGAGNDLLDGQAGNDNLSGGAGDDVIYGGDGNDILQGNDGADTLDGGTGDD 733
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + A + + + N+ D + +D + + +
Sbjct: 734 TLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSAGKLNVLQFKDGV 793
Query: 366 ASYEDLIQVIGQDVFESMK 384
+ E ++ G D+ S+
Sbjct: 794 SPSEVIVTRSGSDLVLSIA 812
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD + + I+ + ++ G + + +++ G GND + G + N
Sbjct: 859 GDDTAQTLVGYTEADTINALGGND-NVYGQGGDDVLDGGAGNDTIYGGEGNDTLRGGADN 917
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ + +GNDV DG +G DT + Y + + + N + L+F
Sbjct: 918 DNLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFI---NSDYDTSAGKLNVLQF 974
Query: 347 ADQC 350
D
Sbjct: 975 KDGV 978
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 28/144 (19%)
Query: 203 GNNI------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G++ Y +Y GGDD+LD G
Sbjct: 1044 GDDTAQTLVGYTEADTINALGGNDNVYGQGGDDVLD----------------------GG 1081
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N TI + + G + ND + G + N++ +GND G +G DT+ + A
Sbjct: 1082 AGNDTIYGGDGNDILRGGADNDNLYGGNGNDILEGGTGNDYLSGENGSDTYLFNAGWGQD 1141
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
+Y ++ + D +D
Sbjct: 1142 TVYNYDTSSGRSDIIAFGTGIAAD 1165
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 4/189 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N ++ + +Q + S G DL I D ++ ++ G
Sbjct: 813 GTTDKITANMVFYWDDTANPYNPVQQVKFSDGT-TWDLATIKAKALIGD---DTAQTLVG 868
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y + TI ++V G G+DV+ G + N+ + GND G + D + + +
Sbjct: 869 YTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIYGGEGNDTLRGGADNDNLYGGNGNDV 928
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + N+ D + +D + + + + E ++
Sbjct: 929 LDGGTGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSAGKLNVLQFKDGVSPSEVIVTRS 988
Query: 376 GQDVFESMK 384
G D+ S+
Sbjct: 989 GSDLVLSIA 997
Score = 40.9 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 30/209 (14%)
Query: 203 GNNI------YKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWS 251
G++ Y +Y GGDD+LD T+ GG N L + +
Sbjct: 859 GDDTAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIYGGEGND-TLRGGADN 917
Query: 252 S-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N + T +++ G GND + + F +S D G + +
Sbjct: 918 DNLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSAGKL--NVLQFK 975
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD---------------VERLRFADQCIDSVN 355
++ + + + D ++ V++++F+D +
Sbjct: 976 DGVSPSEVIVTRSGSDLVLSIAGTTDKITANMVFYWDDTANPYNPVQQVKFSDGTTWDLA 1035
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L + + L+ D ++
Sbjct: 1036 TIKAKALIGDDTAQTLVGYTEADTINALG 1064
>gi|87198748|ref|YP_496005.1| glycosyl transferase family protein [Novosphingobium
aromaticivorans DSM 12444]
gi|87134429|gb|ABD25171.1| glycosyl transferase, family 2 [Novosphingobium aromaticivorans DSM
12444]
Length = 680
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ YL Y D++++ + A HY+ G + GRNP F Y+ ++ D+ A
Sbjct: 17 FDADWYLAEYPDVQSL----QMPPAVHYLWLGARLGRNPSPRFSTRSYLDANPDVAQAGI 72
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ HF G +EGR T + GS
Sbjct: 73 NP-------LLHFLLAGRDEGRSGTILAAPSRGS 99
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 10/90 (11%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
Y A Y D+ + H+ G GR+ + F + YL
Sbjct: 7 NAASLEASDLFDADWYLAEYPDVQSL----QMPPAVHYLWLGARLGRNPSPRFSTRSYLD 62
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ D+ G + H++ G EGR+
Sbjct: 63 ANPDVAQA-GIN---PLLHFLLAGRDEGRS 88
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 19/118 (16%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDD 578
D F A Y+A + D+ + P + H+ G GR S F+ YL + D
Sbjct: 14 SDLFDADWYLAEYPDV-QSLQMPPAV------HYLWLGARLGRNPSPRFSTRSYLDANPD 66
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKK 636
+ H++ G EGR+ I +E + S +H+
Sbjct: 67 VAQA----GINPLLHFLLAGRDEGRSGTILA---APSRGSTETDVN---ASTFGEHRP 114
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 65/209 (31%), Gaps = 45/209 (21%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
D F A Y+A + D+ + P + H+ G GR + F + YL + D
Sbjct: 14 SDLFDADWYLAEYPDV-QSLQMPPAV------HYLWLGARLGRNPSPRFSTRSYLDANPD 66
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ H++ G EGR+ A ++ D+ +
Sbjct: 67 VAQAG----INPLLHFLLAGRDEGRSGTILAAPSRGSTETDV----------------NA 106
Query: 555 SNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM---Q 611
S FG E R F P L W+ + A +GR + I
Sbjct: 107 STFG--EHRPYVFLPPADLDRIAAQWSKDSARPDA-----------QGRGIAIFSAITGS 153
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLY 640
+ S+ + L S K +Y
Sbjct: 154 YDSINHHEHLIPGADYLLFSDAPKPRYVY 182
>gi|74151942|dbj|BAE32010.1| unnamed protein product [Mus musculus]
Length = 472
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 61/193 (31%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T +E+ ++ R A WS V L F +
Sbjct: 110 RTLKWSQTNLTYRIVNYT---PDMSHSEV----EKAFRKAFKVWSDVTPLNFTRIYDGTA 162
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFIVA 221
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H + + +Y M+
Sbjct: 222 AHELGHSLGLDHSKDPGA---------------LMFPIYTYTGKSHFMLP---------- 256
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 257 DDDVQGIQFLYGP 269
>gi|301620474|ref|XP_002939595.1| PREDICTED: matrix metalloproteinase-19 [Xenopus (Silurana)
tropicalis]
Length = 573
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 60/207 (28%), Gaps = 61/207 (29%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHS 77
W + YK T + ++ AL W V L F E +
Sbjct: 150 GSKWKKDMLTYKILNTTAQLPEKMV-------KDELSKALKVWQDVSSLKFVEVGINATA 202
Query: 78 DIKFISSN--------NGYVCTPRYDSRYFM------------EINFDKADVWRYGIGKG 117
DI + N + R FM +++ D + W KG
Sbjct: 203 DIDMFFVSGLHNDGIKNAFDGPGRVLGHAFMPPFSKNKKDIDGDLHLDNDEKWTINEKKG 262
Query: 118 TILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
L A HE+GHALGL H P Y
Sbjct: 263 VNLLQAAAHELGHALGLDHSTVTGALMAPTYK---------------------------- 294
Query: 177 FGYCATPMV--SDIVAVQKIYGAPKGS 201
GY + DI A+Q +YG PK +
Sbjct: 295 -GYNPKFQLHEDDIQAIQALYGKPKLN 320
>gi|261392326|emb|CAX49853.1| FrpA/C protein [Neisseria meningitidis 8013]
Length = 1012
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 536 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 593
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 594 GSTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 649
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 650 ALNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGRKD 709
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 710 IIRFTDGITAD 720
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 736 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 793
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 794 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 831
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V + GND +G G DT A + + + +
Sbjct: 832 TLNGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 889
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 890 GKGFGQDTVYN 900
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 796 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGAE 855
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 856 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 915
Query: 390 GLS 392
+
Sbjct: 916 KAA 918
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 443 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 502
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 503 YATGRKDIIRFTDGITAD 520
>gi|260222767|emb|CBA32654.1| hypothetical protein Csp_D33230 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 1493
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 7/177 (3%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQH 265
Y + + G+D L+ +GG I + + + G + N +
Sbjct: 828 YGADDTLTGHAGGDLLSGGAGNDTLN--GLGGNDYLI---GGAGNDQLNGGDGNDDLFGG 882
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T +++ G G D +IG S + +GNDV G +G D + +Y R +
Sbjct: 883 TGDDTLEGGEGVDYLIGGSGADTINGGNGNDVITGGAGNDILNGGRGNDVYHFNRGDGQD 942
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFE 381
+ +A + Q Q + E Y +++ +
Sbjct: 943 TINEAALGTETIQQSYTYTEQVLQTQSDGKSSYQVWVNETRTGYRSVLRAVEGGEDT 999
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 19/178 (10%)
Query: 198 PKGSLGNNIYKIEVQQKD----SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ N + + S T G D D +++D
Sbjct: 1199 NWSNTANRVEVFQFFDGKDFDVSGITNTYLGQAGADTADTLTGSAGADWMD--------- 1249
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G+ N T+ + V G SGND + G + +++ GND G +G D A +
Sbjct: 1250 -GFAGNDTLRAGAGKDFVQGGSGNDTIYGEADDDLLSGGLGNDTVYGGTGNDIVVGDAGN 1308
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYED 370
F + A D L+ R F + Y + D
Sbjct: 1309 DSL----FGDEGNDVLAGGKGDDILNGGARDDFIMGDAGNDTYQASTGFDTYRFGFGD 1362
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 37/95 (38%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G ++ A V + G +GND + G+SA ++ +G D G +G D + +
Sbjct: 1070 GTTGNDVLTADANVASWLGGGAGNDTLTGSSAADILHGGAGADTLTGGTGDDVYIFGRGD 1129
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ +A + D + D L + D
Sbjct: 1130 GKDILNDSGSAGVGTDKSRPGGDKLLFGTNITMED 1164
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 1/134 (0%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N ++ G+ +++ + + G +D + G++ ++ +GND +G G D
Sbjct: 800 NAKNRIETFGFADGLSLNMGNIDQVASGYGADDTLTGHAGGDLLSGGAGNDTLNGLGGND 859
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A + N + + + V+ L ++
Sbjct: 860 YLIGGAGNDQLNGGD-GNDDLFGGTGDDTLEGGEGVDYLIGGSGADTINGGNGNDVITGG 918
Query: 366 ASYEDLIQVIGQDV 379
A + L G DV
Sbjct: 919 AGNDILNGGRGNDV 932
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 8/155 (5%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNY 242
IV Q GA G T+ + G D D L GG
Sbjct: 562 IVNAQSGMGANDTLSGTAEGDF---MSGGGGNDTLSGAAGKDILVGGTGDDRLDGGADKD 618
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++ G + N + T + + G G+DV++G N+ +G D+ G +
Sbjct: 619 FLFAGAGNDTLIGGDGNDYLIAETGDDVLEGGDGDDVLVGMDGNDTLRGGAGKDMLLGGA 678
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G+D Y +R + +YD +H++ +
Sbjct: 679 GVDFLQGGGGDDTYFYFRGDGKDQIYDNLDHQETY 713
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 11/141 (7%)
Query: 186 SDIVAVQKIYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVK 240
+D+ A+ + G+ K + G + Y V +S D + +L + I G
Sbjct: 291 ADLAALSALTGSAKATRINGGDGYDSLVVLDNSQLNLIADDINVESVLAGSANDSISGKN 350
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N I+ G N T+ + ++G +GND + + +V +G D +G
Sbjct: 351 NTIN------YVFDGGAGNDTLTTAGGEDVLLGGAGNDTLRSGAGADVLSGGAGTDRLEG 404
Query: 301 SSGLDTFFYYAPSYLYKIYRF 321
+G D + +I +
Sbjct: 405 GAGDDVYVLNRGDGADRILDY 425
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 25/172 (14%)
Query: 186 SDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGG 238
D+ + Y G + + F G+D L D G
Sbjct: 1218 FDVSGITNTYLGQAGADTADTLTGSAGADWMDGFA-------GNDTLRAGAGKDFVQGGS 1270
Query: 239 VKNYI------DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ I DL + + + G N + +S+ G GNDV+ G +++
Sbjct: 1271 GNDTIYGEADDDLLSGGLGNDTVYGGTGNDIVVGDAGNDSLFGDEGNDVLAGGKGDDILN 1330
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII---VYDANEHKQDFLS 339
+ +D G +G DT+ Y+ + A+ + D +
Sbjct: 1331 GGARDDFIMGDAGNDTYQASTGFDTYRFGFGDGNDTYIGSEQADINGTDVIQ 1382
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 43/129 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T++ + +VG +G+D + G + + F +GND G G D
Sbjct: 584 MSGGGGNDTLSGAAGKDILVGGTGDDRLDGGADKDFLFAGAGNDTLIGGDGNDYLIAETG 643
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + ++ ++ D N+ + L A + + +D I
Sbjct: 644 DDVLEGGDGDDVLVGMDGNDTLRGGAGKDMLLGGAGVDFLQGGGGDDTYFYFRGDGKDQI 703
Query: 373 QVIGQDVFE 381
Sbjct: 704 YDNLDHQET 712
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 32/195 (16%)
Query: 218 FIQTIYDSGGDDLLDL--------TLIGGVKNYIDLNTESWSSI-------GGYEKNMTI 262
+T D+ G+ +++ IG + + N + S G N+
Sbjct: 181 GYRTRTDANGNTVVEFESGSALHYRNIGATEGNANFNLGTDSDAIVWVGASGNAGANVLN 240
Query: 263 AQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
A E + G +G+D ++G S +++ G D G +G D F
Sbjct: 241 ASSKTTEVLLDGGAGDDTLLGGSGDDILLGGVGADQLQGGAGNDQLFVDGADLAALSALT 300
Query: 322 ENAIIVYDANEHKQDFLS--------------DVERLRF--ADQCIDSVNVKQRSILEYT 365
+A D L +VE + A+ I N + +
Sbjct: 301 GSAKATRINGGDGYDSLVVLDNSQLNLIADDINVESVLAGSANDSISGKNNTINYVFDGG 360
Query: 366 ASYEDLIQVIGQDVF 380
A + L G+DV
Sbjct: 361 AGNDTLTTAGGEDVL 375
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVI----------GNSANNVFFESSGNDVFDGSSGLD 305
+ + + + ++ G++GNDV+ G + N+ SS D+ G +G D
Sbjct: 1053 FINDFAVDIGDIADARKGTTGNDVLTADANVASWLGGGAGNDTLTGSSAADILHGGAGAD 1112
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
T +Y R + I+ D+
Sbjct: 1113 TLTGGTGDDVYIFGRGDGKDILNDSGSAGVGT 1144
>gi|160773895|gb|AAI55488.1| LOC100127856 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 60/207 (28%), Gaps = 61/207 (29%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHS 77
W + YK T + ++ AL W V L F E +
Sbjct: 136 GSKWKKDMLTYKILNTTAQLPEKMV-------KDELSKALKVWQDVSSLKFVEVGINATA 188
Query: 78 DIKFISSN--------NGYVCTPRYDSRYFM------------EINFDKADVWRYGIGKG 117
DI + N + R FM +++ D + W KG
Sbjct: 189 DIDMFFVSGLHNDGIKNAFDGPGRVLGHAFMPPFSKNKKDIDGDLHLDNDEKWTINEKKG 248
Query: 118 TILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
L A HE+GHALGL H P Y
Sbjct: 249 VNLLQAAAHELGHALGLDHSTVTGALMAPTYK---------------------------- 280
Query: 177 FGYCATPMV--SDIVAVQKIYGAPKGS 201
GY + DI A+Q +YG PK +
Sbjct: 281 -GYNPKFQLHEDDIQAIQALYGKPKLN 306
>gi|74199114|dbj|BAE33104.1| unnamed protein product [Mus musculus]
Length = 472
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 61/193 (31%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T +E+ ++ R A WS V L F +
Sbjct: 110 RTLKWSQTNLTYRIVNYT---PDMSHSEV----EKAFRKAFKVWSDVTPLNFTRIYDGTA 162
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFIVA 221
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H + + +Y M+
Sbjct: 222 AHELGHSLGLDHSKDPGA---------------LMFPIYTYTGKSHFMLP---------- 256
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 257 DDDVQGIQFLYGP 269
>gi|301611320|ref|XP_002935198.1| PREDICTED: matrix metalloproteinase-23-like [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 74/221 (33%), Gaps = 62/221 (28%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--S 77
W + + YK D + +A A WSKV LTF+ H S
Sbjct: 70 GYKWDHLNLTYKIVQFPNTLNKDD------TERALA-LAFRMWSKVSSLTFQRVQSHQVS 122
Query: 78 DIKFISSNN------GYVCTPRYDSRYF----------MEINFDKADVWRYGIGK----- 116
D++ G P +D EI+FD + W G +
Sbjct: 123 DLRIGFYTFNHSDCWGSPLHPCFDGLNGELAHAFLPPRGEIHFDNHEFWVLGPSRFSWKQ 182
Query: 117 ---GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
L A HEIGHALGL H S +T++M
Sbjct: 183 GVWYNDLVQVAAHEIGHALGLWHS-------------------SNVTALM--------HP 215
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
+A++ DI+A+Q +YG P S G+ Y +E
Sbjct: 216 NATYTRIRHVTKDDIMAIQSLYGCP--SSGSRCYSLEPSGS 254
>gi|225543094|ref|NP_001139410.1| interstitial collagenase isoform 2 [Homo sapiens]
gi|194387426|dbj|BAG60077.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 28 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 80
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 81 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 140
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 141 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 172
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 173 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 200
>gi|281341731|gb|EFB17315.1| hypothetical protein PANDA_011003 [Ailuropoda melanoleuca]
Length = 435
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 71/210 (33%), Gaps = 55/210 (26%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A ++L D+ W + + Y+ + T D+ A WS V
Sbjct: 62 VPDVAQYVLTDRTPRWEHTHLTYRIENYTPDLPRADV-------DSAIEQAFRLWSNVSP 114
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF + +DI +N P +++FD+ W
Sbjct: 115 LTFTKIFEGQADIMISFVWGDHGDNSPFGGPANTLAHAFLPGGGIGGDVHFDEEKRWTSD 174
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDS 171
+ L A HE+GH+LGL H D+ + S+M SY +D
Sbjct: 175 F-RNFNLYCIAAHEVGHSLGLGH-------------------DNDIGSLMFPSYNNYRDV 214
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++ DI A+Q +YG K
Sbjct: 215 LLSPR----------DISAIQALYGPSKNP 234
>gi|294085322|ref|YP_003552082.1| hypothetical protein SAR116_1755 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664897|gb|ADE39998.1| hypothetical protein SAR116_1755 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 2052
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 70/205 (34%), Gaps = 35/205 (17%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTH-RLSFDITELNPNA-----QEVARWALGEW 62
T + +LL + W PD T H S + LN + AL E+
Sbjct: 1847 TQTQYLKYLLDGEAWWTP-----PDGSTLHMSWSLNTKRLNSQQTIDAARAKVERALAEY 1901
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-TILS 121
+ + F E + ++ ++ + F W G+ G I
Sbjct: 1902 ETFLTIDFIEVAHNA-------HSLGALEFSINKNSGSSGGFASLVRWGGGVSTGLGIHI 1954
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVD------NDYENDSFLTSVMSYFMPQDSMMDA 175
+HEIGH LGL HP Y G + ++ S+M+Y + S +
Sbjct: 1955 STYIHEIGHVLGLAHPFGYTDSSTHTGPPKQGHFGKTPDEENTSNSIMTYGPVEKSTITQ 2014
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKG 200
+DI A+Q +YG P
Sbjct: 2015 ----------NDINALQFLYGIPGT 2029
>gi|270013041|gb|EFA09489.1| hypothetical protein TcasGA2_TC010983 [Tribolium castaneum]
Length = 516
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 75/211 (35%), Gaps = 70/211 (33%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
D+ L + WS++ I ++ V +H + + R A W + +L F ET
Sbjct: 81 DYTLHPKKWSHFNITWRAHVGDSHI------------KSLVRKAFSIWEEFTNLKFTETP 128
Query: 75 ----IHSDIKFISSNNGYV-----CTPRYDSRYFM-------------EINFDKADVWRY 112
+ I F + + Y C+ +D + EI+ D A+ W Y
Sbjct: 129 RNRYPNIFIAFTARKHKYFIHQRECSSDFDGPGNVLAHADFPNDINVTEIHIDNAESWSY 188
Query: 113 G------IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM-SY 165
L + +HE+GH LGL H S TS+M S+
Sbjct: 189 STTVDASYSDSPSLLNVIIHELGHTLGLEHS-------------------SVNTSIMYSF 229
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ S +D DI A+Q +YG
Sbjct: 230 YSNSRSKLDQ----------DDIWAIQNLYG 250
>gi|75909472|ref|YP_323768.1| Ig family protein [Anabaena variabilis ATCC 29413]
gi|75703197|gb|ABA22873.1| Putative Ig [Anabaena variabilis ATCC 29413]
Length = 3209
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 21/197 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL----LDLTLIGGVKNYIDLNTESWSSIGG 255
G G++ Y + + + G D + TL ++N I + + + G
Sbjct: 2888 GGAGDDTYYTDSSNDQIIEVF----NEGTDTVRSAISWTLGYNLENLILTGSNAINGTGN 2943
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
KN +I +T ++ G +D + G++ N++ +GND DG G D A +
Sbjct: 2944 ALKN-SITGNTANNTLSGGDNDDTLNGDAGNDILNGDAGNDSLDGGVGNDVMIGGAGNDT 3002
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDV----------ERLRFADQCIDSVNVKQRSILEYT 365
Y + II +A D + + I+ + +
Sbjct: 3003 YYTDSINDQII--EATNAGTDTVRSAISWTLSNNLENLILTGSNAINGTGNALVNNMTGN 3060
Query: 366 ASYEDLIQVIGQDVFES 382
++ L D
Sbjct: 3061 SANNSLSGGDNNDTLNG 3077
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 17/196 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL----LDLTLIGGVKNYI----DLNTES-- 249
G GN+ Y + + I+ + G D + TL ++N I + +
Sbjct: 2996 GGAGNDTYYTD--SINDQIIEA--TNAGTDTVRSAISWTLSNNLENLILTGSNAINGTGN 3051
Query: 250 --WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+++ G N +++ +++ G G+D++ G + N+ +GND G G D
Sbjct: 3052 ALVNNMTGNSANNSLSGGDNNDTLNGGDGDDILNGGNGNDTLIGGNGNDTLVGGVGSDKL 3111
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + + I D L V+ L + + + + +
Sbjct: 3112 TGGAGNDKFVFNSLSEGIDTITDFSSTNDVLV-VQSLLASFNYTGTNPIANGYMRGIQSG 3170
Query: 368 YEDLIQVIGQDVFESM 383
LIQV V S
Sbjct: 3171 SNTLIQVDADGVGSSA 3186
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 62/208 (29%), Gaps = 28/208 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYE 257
G L N+ Y ++ ++ + G D + + N +L SS+ G
Sbjct: 2770 TGGLDNDTYIVD--NSADKVVEN--ANEGTDTVRSSISYTLGDNIENLVLTGTSSLSGTG 2825
Query: 258 K--NMTIAQHTVI---------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
N I +T + + G GND + G S N+ +GND DG +G D
Sbjct: 2826 NTLNNLITGNTGANTLNGKAGDDIINGEGGNDTLNGESGNDTLNGGTGNDSLDGGAGDDV 2885
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV----------ERLRFADQCIDSVNV 356
A Y + II + D + + I+
Sbjct: 2886 MLGGAGDDTYYTDSSNDQII--EVFNEGTDTVRSAISWTLGYNLENLILTGSNAINGTGN 2943
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMK 384
++ + + L D
Sbjct: 2944 ALKNSITGNTANNTLSGGDNDDTLNGDA 2971
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 195 YGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--LNTESW 250
YG + NN K I + SP T + +D L +KN D + T+
Sbjct: 1490 YGIDTITQNNNADKDIISFKAGISPSDITFWRRSNNDSEKNNLYLAIKNTHDRLIITDQL 1549
Query: 251 SSIGGYEKNMTIAQHTV--IESVVG-----SSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ T A T+ E++ ++G+D ++G +N+ +GND+ +G +G
Sbjct: 1550 VNNAYGIDQFTFADGTIWTRENIQAWLLQSTTGDDYLVGYQSNDTLDGGAGNDLLNGGAG 1609
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+T+ + + I N + +
Sbjct: 1610 NNTYVFGRGYGIDTIAENSNTGTDTLSFKAG 1640
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 19/150 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSG 303
N++ I ++ G++GND + G ++V +GND DG +G
Sbjct: 2706 TDNKRANVSDTFAINIRNLTGTAGNDSITGTFNDDVIQGLGGNDILLGLAGNDTLDGGTG 2765
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS--------DVERLRFADQ-CIDSV 354
DT + Y I +V +ANE S ++E L +
Sbjct: 2766 QDTMTGGLDNDTY-IVDNSADKVVENANEGTDTVRSSISYTLGDNIENLVLTGTSSLSGT 2824
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+++ L G D+
Sbjct: 2825 GNTLNNLITGNTGANTLNGKAGDDIINGEG 2854
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 14/154 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGD----DLLDLTLIGGVKNYI---DLNTESWS 251
+ G + + S T + D L L + I + +
Sbjct: 1756 NYNTGTDTLSFKTGINPSDI--TFWRKSNSYPESDNLYLAIKNTHDQIIIEDQFRSGPYG 1813
Query: 252 SIGGYEKNMTIAQHTVIES--VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
N TI I++ + ++G+D ++G +N+ +GND+ +G G +T+ +
Sbjct: 1814 IDQFVFANGTIWTRENIQTWLLQSTTGDDYLLGYQSNDTLDGGAGNDLLNGGYGNNTYIF 1873
Query: 310 YAPSYLYKI---YRFENAIIVYDANEHKQDFLSD 340
+ I Y + + A K D +
Sbjct: 1874 GRGYAVDTIVENYNTGTDTVSFKAGISKSDVVFW 1907
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 7/145 (4%)
Query: 197 APKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI---DLNTESWS 251
A + G + + D F + D L L + I + +
Sbjct: 1625 AENSNTGTDTLSFKAGINPSDITFWRKSSSYPESDNLYLAIKNTHDQIIIEDQFRSGPYG 1684
Query: 252 SIGGYEKNMTIAQHTVIES--VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
N TI I++ + ++ +D ++G +N+ +GND+ +G G +T+ +
Sbjct: 1685 IDQFVFANGTIWTRENIQTWLLQSTTDDDYLLGYQSNDTLDGGAGNDLLNGGYGNNTYVF 1744
Query: 310 YAPSYLYKIYRFENAIIVYDANEHK 334
+ I N + +
Sbjct: 1745 GRGYGIDTIVENYNTGTDTLSFKTG 1769
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 15/99 (15%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + GG N I L + S+ GG G +G+D + G +++
Sbjct: 1272 TITYAVTGGKGNDI-LTILASSTTGGILN--------------GGAGDDTLTGAGGSDII 1316
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G DV +G DT A + + IV
Sbjct: 1317 NGGKGKDVIKAGAGDDTITVDADDIITSLDGGAGFDIVT 1355
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 53/174 (30%), Gaps = 42/174 (24%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL------TLIGGVKNYIDL-----NTESWS 251
G+++Y+ + TI D GG D+++ + + ++ +L N + S
Sbjct: 796 GDDVYRYSLGNGKD----TIDDIGGVDVIEFDSNIQLSNLRLQQSSNNLIISIINPSNPS 851
Query: 252 SIGGYEKNMTIAQHTVIESVVGS--------------------------SGNDVVIGNSA 285
+ + +T IE + S N + G
Sbjct: 852 APITNQLTITNFLTNKIEFIRLGNNQEYFLDNSSGQWQLKATNNVQTATSSNTTIQGTIG 911
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+V ND G +G DT+ Y L ++ + D L
Sbjct: 912 ADVLRGLGENDTLLGGAGNDTYLYSFGDGLNTTI-YDTGDYEGKVRDGGIDTLV 964
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 271 VVGSSGNDVVIGNSA---NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++GND ++G S N GND G SG DT+ + I + +
Sbjct: 2093 LKSTNGNDYIVGYSEGINNETLDGGLGNDTLAGGSGNDTYIFKQGYGQDIIQEGYSGL 2150
Score = 40.9 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 271 VVGSSGNDVVIGNSA---NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + G+D ++G S N++ GND G +G DT+ + I
Sbjct: 2224 LKSTPGDDYLVGYSWGIRNDILDGGLGNDTLVGGTGDDTYIFKQGYGQDII 2274
Score = 40.9 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 56/222 (25%), Gaps = 70/222 (31%)
Query: 188 IVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDL-------TLIG 237
I+A G G G++ I GDD + + +L G
Sbjct: 1288 ILASSTTGGILNGGAGDDTLTGAGGSDIINGGKGKDVIKAGAGDDTITVDADDIITSLDG 1347
Query: 238 GVK---NYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-----------GSSGNDVVIGN 283
G IDL++ I N+ T I + + G GND++ G
Sbjct: 1348 GAGFDIVTIDLDSR-LHLILKDSNNVEAIIGTKISNQITYIGVKPVLISGDLGNDILTGG 1406
Query: 284 SANNVFFESSGND---------------------------------------------VF 298
++ G D +
Sbjct: 1407 EGDDQIEGGEGKDKLYGNKGKDLLLGGLDDDSLYGEQNDDQLYGQEGDDFLDGGDGNDIL 1466
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G G D+ + Y R + N +D +S
Sbjct: 1467 NGGIGNDSLKGGSGQNTYIFGRGYGIDTITQNNNADKDIISF 1508
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 271 VVGSSGNDVVIGNSA---NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ +S +D ++G S N GND G +G DT+ + I +
Sbjct: 2356 LKSTSADDYIVGYSEGINNETLDGGLGNDTLVGGTGNDTYIFKQGYGQDIIQEGYSGF 2413
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 12/137 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--LNTESWSSIGGY 256
+ G + + S + + L +KN D + + + S
Sbjct: 1885 NYNTGTDTVSFKAGISKSDVVF--WRKSNSSTEQDNLYLAIKNTNDRLIIEDQFRSGPYG 1942
Query: 257 EKNMTIAQHTVI-ESVVGSSG-------NDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
A T I S + S +++V G++ N ++GND G G DT+
Sbjct: 1943 IDQFIFADGTTITRSEINSMSLPNNLPEDNLVTGDANANTLENATGNDTLAGGIGNDTYI 2002
Query: 309 YYAPSYLYKIYRFENAI 325
+ I + +
Sbjct: 2003 FKQGYGQDIIQEGYSGL 2019
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 273 GSSGNDVVIGNSA---NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ G+D ++G S N G+D G +G DT+ + I
Sbjct: 2490 STDGDDYIVGYSEGINNETLDGGLGDDTLVGGAGNDTYIFKHDYGQDIIQEG 2541
>gi|296216041|ref|XP_002754395.1| PREDICTED: matrix metalloproteinase-20 [Callithrix jacchus]
Length = 483
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 71/217 (32%), Gaps = 53/217 (24%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR-WALGE 61
KP +A++ L + W + Y+ T ++P + A AL
Sbjct: 97 KPRCGVPDVANYRLFPGEPKWKKNTLTYRISKYTPS--------MSPAEVDKAVGMALQA 148
Query: 62 WSKVVDLTFEET-SIHSDI--KFISSNNGYVCTPRYDSRYF-----------MEINFDKA 107
WS V L F S +DI F + ++G + +FD A
Sbjct: 149 WSGAVPLNFVRINSGEADIMVSFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNA 208
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYF 166
+ W G G L A HE GHALGL H + YP Y N Y
Sbjct: 209 EKWTMGTN-GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYRYQNPY------------- 254
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
F D+ +Q +YG K LG
Sbjct: 255 ---------GFHLP----KDDVKGIQALYGPRKPFLG 278
>gi|330993107|ref|ZP_08317045.1| hypothetical protein SXCC_03007 [Gluconacetobacter sp. SXCC-1]
gi|329759877|gb|EGG76383.1| hypothetical protein SXCC_03007 [Gluconacetobacter sp. SXCC-1]
Length = 522
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 19/136 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD+ YL + D+ HY+ +G +EGR P+ F+ Y+A H D +
Sbjct: 26 FDTEFYLATNQDI----AGSGYEPLVHYVKYGFREGRRPNRNFRPALYVAQHPD-AGLDS 80
Query: 458 DAPDLVQVGKD---HFSNFGCEEG----------RFVTFDSYLYLGSYDDLRNVFGSDRG 504
P + + H ++ G R + + G Y DL D
Sbjct: 81 RNPFIHFLQTHNGCHIAHHGLLTRFRLEDLSLGVRTLEQLPFFEAGDYHDLNRDVARDTT 140
Query: 505 AAARHYITHGVKEGRN 520
A H + +GV EGR
Sbjct: 141 DLAEHALLYGVPEGRR 156
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 72/223 (32%), Gaps = 39/223 (17%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSY 492
R F Y+A+++D+ + + H+ +G EGR F LY+ +
Sbjct: 21 RESGQFDTEFYLATNQDIAGSGYEP-------LVHYVKYGFREGRRPNRNFRPALYVAQH 73
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D G D H++ +H L+ F
Sbjct: 74 PD----AGLDSRNPFIHFLQ------------THNGCHIAHHGLLTRFRLED-------- 109
Query: 553 HFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
+ G + F Y DL D + A+H + +G+ EGR L +
Sbjct: 110 --LSLGVRTLEQLPF---FEAGDYHDLNRDVARDTTDLAEHALLYGVPEGRRLFKALRVS 164
Query: 613 KSVMNLSEKS-RDKADLSLSFDHKKVDLYTDYFGDGNYYDSDL 654
+++ L + D A +L + Y GN + ++
Sbjct: 165 ETLGTLCIGTEPDHATQTLPDGPVPDSIGIFYNSGGNVFIHEI 207
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 39/148 (26%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRN 413
Q Y A+ +D+ +E + H+ ++G EGR F LY+ + D
Sbjct: 23 SGQFDTEFYLATNQDIAG----SGYEPLVHYVKYGFREGRRPNRNFRPALYVAQHPD--- 75
Query: 414 VFGSDRGAAARHYIT---------HG-----VKEGRNPDA--------FKALEYIASHED 451
G D H++ HG E + F+A +Y + D
Sbjct: 76 -AGLDSRNPFIHFLQTHNGCHIAHHGLLTRFRLEDLSLGVRTLEQLPFFEAGDYHDLNRD 134
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ D +H +G EGR
Sbjct: 135 VARDTTDLA-------EHALLYGVPEGR 155
>gi|297182166|gb|ADI18338.1| rtx toxins and related ca2+-binding proteins [uncultured
Rhodobacterales bacterium HF4000_03E16]
Length = 462
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 54/184 (29%), Gaps = 13/184 (7%)
Query: 215 DSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G D LD GG + L + G N TIA +
Sbjct: 178 GGAGADTLNGGSGSDTLDGGAGDDRFYGGTGADVILGGAGHDTAYGGTGNDTIAGGDGND 237
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENA 324
G SG D++ G++ ++ + GND G +G D A
Sbjct: 238 RAYGGSGADLIGGDAGDDTIYAGGGNDTVLGGAGHDRISANGGHDSVDGGAGYDRLAGGA 297
Query: 325 IIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFE 381
D LS D+ D++ +L A+ + L G D +
Sbjct: 298 GHDTLVGGAGNDRLSGGSGHDFLTGDEGRDALFGGSGDDVLFGGAAQDTLTGSSGHDRLD 357
Query: 382 SMKH 385
Sbjct: 358 GGGD 361
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 1/134 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + G +G D + G S ++ +G+D F G +G D A
Sbjct: 158 LSGGLGADALRGGSGSDLLYGGAGADTLNGGSGSDTLDGGAGDDRFYGGTGADVILGGAG 217
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ I D N+ S + + + A ++ +
Sbjct: 218 HDTAYGGTGNDTIAGGDGNDRAYGG-SGADLIGGDAGDDTIYAGGGNDTVLGGAGHDRIS 276
Query: 373 QVIGQDVFESMKHF 386
G D + +
Sbjct: 277 ANGGHDSVDGGAGY 290
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 5/131 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLT----LIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIE 269
T+ G+D L + G + L S + G T+ + +
Sbjct: 295 GGAGHDTLVGGAGNDRLSGGSGHDFLTGDEGRDALFGGSGDDVLFGGAAQDTLTGSSGHD 354
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +D++ G S + +G+D+ G G D F + + + D
Sbjct: 355 RLDGGGDSDLLRGGSGADTLTGGAGDDLLIGGQGDDVFVFLPGFGADTVAGHGTGDDLID 414
Query: 330 ANEHKQDFLSD 340
LSD
Sbjct: 415 MTAVGVSDLSD 425
Score = 44.0 bits (102), Expect = 0.077, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 8/126 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G G+D + G +++ + D G+ G DT A
Sbjct: 102 DTILGGGGSDTLRGGYGDDLLSGGAEADYLHGNRGADTLEGGAGDDHLS----GGGDDDM 157
Query: 329 DANEHKQDFLSD--VERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVF-ESMK 384
+ D L L + D++N L+ A + G DV
Sbjct: 158 LSGGLGADALRGGSGSDLLYGGAGADTLNGGSGSDTLDGGAGDDRFYGGTGADVILGGAG 217
Query: 385 HFYEFG 390
H +G
Sbjct: 218 HDTAYG 223
>gi|75910358|ref|YP_324654.1| VCBS [Anabaena variabilis ATCC 29413]
gi|75704083|gb|ABA23759.1| VCBS [Anabaena variabilis ATCC 29413]
Length = 6581
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 13/187 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++++++ + + I G D+LD + ++L S ++I +
Sbjct: 1918 GGAGDDVFQL---LDNVGIVGAIAGGTGKDVLDYSFYT-TGITVNLTVGSATNITNGIQG 1973
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
IE+V G ND++IG+S +N S GND +G G DT
Sbjct: 1974 --------IENVTGGISNDLIIGDSQDNTLAGSGGNDTLNGGDGDDTLIISVLGISTVDG 2025
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN-VKQRSILEYTASYEDLIQVIGQD 378
+V +E + ++ AD ++ VN ++ T + +D+I V D
Sbjct: 2026 GNGKDTLVVRGSEDADNLEVANNKITTADGTLELVNWTGVEAVEVKTLAGDDVITVSVTD 2085
Query: 379 VFESMKH 385
+
Sbjct: 2086 GSPKITL 2092
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 29/148 (19%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--LLDLTLIGGVKNYIDLNTESWS-- 251
G + +GN + + TI G+D +D + T
Sbjct: 5086 GDDQIKIGNLTPNLGGTVNNITGALTITGGEGNDQLTIDDSGDTAASTGTLTATTITGLS 5145
Query: 252 --------------SIGGYEKNMTIAQHTVIESVVGSSGND-----------VVIGNSAN 286
++G N T+ T + +++G SG+D + GN+ N
Sbjct: 5146 PSSITYGTVETLNVNLGSGANNFTVQGTTAVTTIIGGSGDDIIDASASSQAITIFGNAGN 5205
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ +GND D +G D A +
Sbjct: 5206 DRITGGAGNDRLDTGTGQDFVIGGAGND 5233
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 11/93 (11%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVV-----------IGNSANNVFFESSGNDVFDG 300
++G N+T+ + ++ G SGND + GN+ N+ GND D
Sbjct: 5908 NLGSGSNNLTVQGVSAATTITGGSGNDTINASAINQAIAIYGNAGNDNITGGGGNDTLDS 5967
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G DT + L + A + +
Sbjct: 5968 GTGEDTVTAGGGNDLIYVQGTSGAGTTINGDAG 6000
Score = 44.7 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 15/149 (10%)
Query: 199 KGSLGNNIYKIEVQQKD--SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+++ + + + + +GG D +T+ + T + +++ G
Sbjct: 5833 NADAGDDVINVGGGTPNTVNAIAAALTINGGADTDTITINDSGDTANNTGTLTATALTGL 5892
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVI--GNSANNVFFESSGNDV-----------FDGSSG 303
N ++ SG++ + G SA SGND G++G
Sbjct: 5893 GSNGITYGTVETLNINLGSGSNNLTVQGVSAATTITGGSGNDTINASAINQAIAIYGNAG 5952
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANE 332
D + E+ + N+
Sbjct: 5953 NDNITGGGGNDTLDSGTGEDTVTAGGGND 5981
Score = 44.3 bits (103), Expect = 0.068, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 34/179 (18%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
S TI G D L+ + + L S N+T Q T I++V+
Sbjct: 215 SNGSTLSGTIDGGTGIDTLNYSADT-TAQQVTLTGLGSSDGFAGTSNLT-QQFTNIDNVI 272
Query: 273 GSSGNDVVIGNSA---------------NNV-------FFESSGNDV----------FDG 300
G SGN+ + G +A NN+ S D G
Sbjct: 273 GGSGNNTLTGLNASATWEIDGTNRYISTNNLSFTGFSNLTGGSNADTFIITGNQTADLRG 332
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+G D F + + L DA+ + ++ L +D + N+ Q+
Sbjct: 333 QAGADRFQFNNAANLTGTIDGGTDSDTIDASAYTTAQQVNLTGLGSSDGFAGTSNLTQQ 391
Score = 40.9 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 55/223 (24%), Gaps = 38/223 (17%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG------GVKNYIDLNTESW 250
GS I + I + S G+D L G YI N+
Sbjct: 1035 TNLGSSDGFIGTETTISNNFTNIDVVVGSSGNDTLTGINAAANWEIDGTNRYISTNSLDI 1094
Query: 251 SSI----GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN---VFFESSGNDVFD---- 299
S + GG + +++G +G D N +G D D
Sbjct: 1095 SGVENLTGGSNADTFTISGAQTANIIGGAGADTFQFNDTATLTGTIDGGTGADTLDYAAY 1154
Query: 300 ---------------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE------HKQDFL 338
G SG D + + I + N +
Sbjct: 1155 TTARQIALTDLGIRDGFSGTDAAISNGFNNIDTIVGSSTTDTITGINAAANWEIDGTNRY 1214
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
L F+ + A ++I G D F+
Sbjct: 1215 LSTNILNFSGIENLVGGSDADTFTISGAQTANIIGGAGADTFQ 1257
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 67/237 (28%), Gaps = 47/237 (19%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEK 258
G G + ++ + TI G D LD + I L + S G E
Sbjct: 1249 GGAGADTFQFNDTATLTG---TIDGGTGADTLDYAAYTTARQ-IALTSLGISNDWNGTEA 1304
Query: 259 NMTIAQHTVIESVVGSSGNDVVIG-NSANN---------------------VFFESSGND 296
+T I+++VGSS D + G N+A N + D
Sbjct: 1305 AITEGFKN-IDTIVGSSATDTLTGINAAANWEIDGTNRYLSTNILNFSGIENLVGGNNVD 1363
Query: 297 V----------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------DFLSD 340
G SG DTF + + L + + D +
Sbjct: 1364 NFVISGTQIANLIGGSGSDTFQFSDTATLTGTIDGGTGVDILDYTAYTTNRNVILTTYGQ 1423
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ + D +E S D I + ++ G E +I
Sbjct: 1424 IDGFVGTEDSFDEGYFTNIDNIEAGTSNSDNIFGV---SATALWILNNTGRYESTNI 1477
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 36/162 (22%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G + ++ + TI G D LD + + G +
Sbjct: 1121 GGAGADTFQFNDTATLTG---TIDGGTGADTLDYAAYTTARQIALTDLGIRDGFSGTDAA 1177
Query: 260 MTIAQHTVIESVVGSSGNDVVIG-NSANN---------------------VFFESSGNDV 297
++ + I+++VGSS D + G N+A N S D
Sbjct: 1178 ISNGFNN-IDTIVGSSTTDTITGINAAANWEIDGTNRYLSTNILNFSGIENLVGGSDADT 1236
Query: 298 ----------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G +G DTF + + L D
Sbjct: 1237 FTISGAQTANIIGGAGADTFQFNDTATLTGTIDGGTGADTLD 1278
Score = 38.2 bits (87), Expect = 5.2, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 56/197 (28%), Gaps = 24/197 (12%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-----------SW 250
G N + I + S D LT+ G + ID N +W
Sbjct: 2442 AGANTGSVTGVSLGFTNIGNLVGSSSSDTFTLTVAGSLAGSIDGNGGNNTLQGVSVENTW 2501
Query: 251 SSIGGYEKNMTIAQHTV----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++ T+ I +++G + +D I + N+ G G +T
Sbjct: 2502 TITSNDTGSIDNIAGTLEFSDIANLIGGNADDTFILEN-NSQITG-----EIVGGGGNNT 2555
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + I + I N SD+ L D + I A
Sbjct: 2556 LQGGSVENTWTITSNDTGSID---NIAGTTEFSDIANLIGGDGDDTFILEGDSQITGEIA 2612
Query: 367 SYEDLIQVIGQDVFESM 383
+ G +V
Sbjct: 2613 GGGGNNTLQGGNVDNEW 2629
>gi|172055176|ref|YP_001806503.1| hemolysin-type calcium-binding protein [Cyanothece sp. ATCC 51142]
gi|171701457|gb|ACB54437.1| hemolysin-type calcium-binding protein [Cyanothece sp. ATCC 51142]
Length = 2077
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 57/174 (32%), Gaps = 12/174 (6%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ TI G D+L GG N + L + + G N T+ +++ G
Sbjct: 1298 GNAGNDTIIGGSGIDIL----YGGTGNDLILGGDDSDYVYGENGNDTLYGGNGNDTITGG 1353
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYD 329
GNDV+IG + N+ GND +G+SG D + Y
Sbjct: 1354 FGNDVLIGEAGNDSLQGGDGNDTLEGASGNDNLNGGNHNDHLTGDSGNDTLEGGNGDDYL 1413
Query: 330 ANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A D+LS + L +L + + L G D
Sbjct: 1414 AGGSDNDYLSGGDGNDYLEGGSGQDTLFGRTGDDLLYGGSDNDVLNGDAGNDQL 1467
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 65/207 (31%), Gaps = 24/207 (11%)
Query: 194 IYGAPKGSL-----GNNIY---KIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGG 238
+YG GN++ + T+ + G+D L+ LT G
Sbjct: 1341 LYGGNGNDTITGGFGNDVLIGEAGNDSLQGGDGNDTLEGASGNDNLNGGNHNDHLTGDSG 1400
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N + + + G N ++ + + G SG D + G + +++ + S NDV
Sbjct: 1401 NDTLEGGNGDDY--LAGGSDNDYLSGGDGNDYLEGGSGQDTLFGRTGDDLLYGGSDNDVL 1458
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVN 355
+G +G D F N + D L S + L
Sbjct: 1459 NGDAGNDQLFGETGDDSL----NGNDGNDLLNGNNGDDTLFGSSGNDTLSGDAGYDYLDG 1514
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFES 382
L + + LI G D +
Sbjct: 1515 GDNNDQLFGISGNDTLIGGAGDDTLQG 1541
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 5/165 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T++ GDDLL + L G N S+ G + N +
Sbjct: 1428 NDYLEGGSGQDTLFGRTGDDLLYGGSDNDVLNGDAGNDQLFGETGDDSLNGNDGNDLLNG 1487
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +++ GSSGND + G++ + ND G SG DT A + +N
Sbjct: 1488 NNGDDTLFGSSGNDTLSGDAGYDYLDGGDNNDQLFGISGNDTLIGGAGDDTLQGDSPQNT 1547
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ ++ + + Q + +V + + Y+
Sbjct: 1548 GDLAESVWDIESSHIRSQDFTLNRQVVGLNDVNNDGLNDLVLQYD 1592
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + + V G G+D + GN+ N+ GND G SG D + +
Sbjct: 1038 GNDRVDAGVGNDLVRGGFGHDYIYGNAGNDSLHGDQGNDTLYGGSGYDLLEGNDGNDTF 1096
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 5/133 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF--YY 310
+ G N + +++ G +GND + G ++ GND+ +G +G D Y
Sbjct: 1182 LEGKGGNDILLGDAGNDTLKGGTGNDTLNGGDGHDSLDGGDGNDLLEGGTGNDILLASGY 1241
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + K +++ L + + L ++ A
Sbjct: 1242 AGNDTLKGGSGNDSLDATGVYSFYYLELYGEAGNDVLLGGSSSDLLDGGADYDLIYGNAG 1301
Query: 368 YEDLIQVIGQDVF 380
+ +I G D+
Sbjct: 1302 NDTIIGGSGIDIL 1314
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 65/207 (31%), Gaps = 20/207 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-- 253
G S G+ Y + + D D +L G + L+ + +I
Sbjct: 1866 GTAFISNGDWTYTSNLTAEFFDINDVNNDGLKDLILQYDRNGERYQQVRLSDGNSFNISQ 1925
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY---- 309
G ++ IA +++ G GND + G +++V +G D G G DTF
Sbjct: 1926 GNLQETGFIAVDDLLD---GGDGNDNLNGGISDDVLIGGTGIDTLTGGEGADTFVLELRD 1982
Query: 310 ---YAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILE 363
L E ++ + NE VE+ + +V
Sbjct: 1983 SLNGKTDELTDFSSAEGDRLLININEFGGGLSKGFLSVEQF-----YLGAVASSSEHRFV 2037
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFG 390
Y +S L+ + H F
Sbjct: 2038 YNSSNGHLLFTPSGNADNLNYHIATFS 2064
>gi|126730970|ref|ZP_01746779.1| type I secretion target repeat protein [Sagittula stellata E-37]
gi|126708686|gb|EBA07743.1| type I secretion target repeat protein [Sagittula stellata E-37]
Length = 1044
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 30/225 (13%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
++SDI + + G + G++ ++ + I+ +++ L G + I
Sbjct: 296 LISDIATGEMLKGGETVTTGSDNDTLDASGFTATGIEFTFNADEGGYLGDGTNNGTFSGI 355
Query: 244 ---------DLNTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D S SS+ + N +I T +SVVG +GND + G + N+
Sbjct: 356 EHFVLTDQDDTVDASVSSVDLTFDALDGNDSIVAGTGDDSVVGGTGNDTLRGAAGNDTIE 415
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G+D+ G+SG D+ S + + + D + E
Sbjct: 416 GGAGDDLIAGNSGDDSLIGGDGSDSL----YGEEGADFVSGGDGDDTVEGNE------GN 465
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ + + L G D + G +
Sbjct: 466 DTLYGGAGNDWMRGSYENDILYGGAGDD-------YLWGGWGDDT 503
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 25/157 (15%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNT---------ESWS--SI 253
Y + + P + + D LDL+ +G + +DL T ++S
Sbjct: 3 TYVVTTSNWNQPSFWSGISAASGDTLDLSALGAAYSVDVDLATNMVTISDGVTTFSIGDA 62
Query: 254 GGYEKNMTIAQHTVI-----------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
G + + +V +++ G +GND + G + ++ +G+D G +
Sbjct: 63 GSTGTDAQLGSGSVDFFDGQFGTAGDDTLDGGAGNDSLNGQAGDDSITGGTGDDTLIGGA 122
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDAN--EHKQDF 337
G D F +++ A V DF
Sbjct: 123 GDDQLFGQDDGDFFRVEDGFGADTVVGGEGVSAGTDF 159
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 3/140 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTES---WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
S G + G L + S + G + T+ +S+ G +G+D +
Sbjct: 51 SDGVTTFSIGDAGSTGTDAQLGSGSVDFFDGQFGTAGDDTLDGGAGNDSLNGQAGDDSIT 110
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + ++ +G+D G D F + E D + L+
Sbjct: 111 GGTGDDTLIGGAGDDQLFGQDDGDFFRVEDGFGADTVVGGEGVSAGTDFDTLDLSALTSG 170
Query: 342 ERLRFADQCIDSVNVKQRSI 361
+ F+ S + ++
Sbjct: 171 VTVTFSGSEAGSASDGTDTL 190
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N +I ++V G+D V+G + + G D DG +G DT +A
Sbjct: 713 IEAGAGNDSIVAGAGNDTVNAGEGDDTVLGGDGYDDLYGLEGADSIDGGTGDDTI--HAG 770
Query: 313 SYLYKIYRFENAIIVYDANE 332
S + + A++
Sbjct: 771 SGDTAVGGDGDDTFFVSASD 790
Score = 40.5 bits (93), Expect = 0.97, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 23/100 (23%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ +I G+D ++ E + T+ + + G
Sbjct: 714 EAGAGNDSIVAGAGNDTVN----------------------AGEGDDTVLGGDGYDDLYG 751
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G D + G + ++ SG D G G DTFF A
Sbjct: 752 LEGADSIDGGTGDDTIHAGSG-DTAVGGDGDDTFFVSASD 790
>gi|83310367|ref|YP_420631.1| large exoprotein [Magnetospirillum magneticum AMB-1]
gi|82945208|dbj|BAE50072.1| Large exoprotein [Magnetospirillum magneticum AMB-1]
Length = 5299
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 204 NNIYKIEVQQKDS-PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
++ Y I++I G+D++DLT + +I G N +
Sbjct: 4807 DDGYSGSPTGGARIDGIESIVAGDGNDVVDLTSSKYTYGDV--------TIDGGAGNDVL 4858
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G +GNDV+ G S N+ G D DG G DT A + L I +
Sbjct: 4859 MGNAGNDVIDGGTGNDVLYGASGNDTLRGGDGADTLDGGYGADTIDAGAGNDLGIIKGGQ 4918
Query: 323 NAIIVYDANEHKQDFLSD 340
+A YD D
Sbjct: 4919 SAGDNYDGGTGTDTLRID 4936
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 59/191 (30%), Gaps = 23/191 (12%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
++ D G + D+ +V +L + V K S + +D G
Sbjct: 4432 TYTVSDGHGGTTSGSASFDVTSVNDGPTTSDVTLASGTEDRSVTIKASDLLGNAHDVDG- 4490
Query: 229 DLLDLTLIGGVKNYI-DLNTES--------WSSIGGYEKNMTIAQH------------TV 267
D L ++ + I D + + +S ++ Q V
Sbjct: 4491 DTLSVSNLSASNGTITDNHDGTYTFTPNHDFSGNVDLSYTVSDGQGGSTAGTAHFGMAAV 4550
Query: 268 IESVVGSSGNDVVIGNSA-NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+S V S+ N V + ++GND G SG D + + + +
Sbjct: 4551 ADSPVLSASNITVDLGAGQAQTLNGTTGNDTLSGGSGNDVVNGSSGDDVLYGDGTGSVTV 4610
Query: 327 VYDANEHKQDF 337
+ ++ D
Sbjct: 4611 PLNISDRLSDT 4621
>gi|86148746|ref|ZP_01067019.1| VCBS [Vibrio sp. MED222]
gi|85833461|gb|EAQ51646.1| VCBS [Vibrio sp. MED222]
Length = 2142
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 62/165 (37%), Gaps = 13/165 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--------DLN- 246
G L N + Q + +I+ ++ G D + L G + I +L+
Sbjct: 1898 GDSHAVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQGEDSEIAATNNSTANLDV 1957
Query: 247 --TESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S I G + I + + + G GND + G + ++ SG+D+ G G
Sbjct: 1958 AHGGGGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTGHDTLKGGSGDDILIGGIG 2017
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
D + ++K + + + + + DF +++ +D
Sbjct: 2018 NDILTGGSDDDIFKFVD-QGSGVRHGEKDTITDFTKGDDKIDISD 2061
>gi|307609442|emb|CBW98936.1| structural toxin protein RtxA [Legionella pneumophila 130b]
Length = 1557
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND + G N+V SGNDV G +G DT + + + + + +
Sbjct: 866 DTIGGGQGNDQIYGQEGNDVIDGGSGNDVIVGGTGNDTLTGGSGADQFVLVKGQGGASTG 925
Query: 329 DAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A + DF +++++ I V+V YT
Sbjct: 926 VAPIDTITDFEVNIDKIVINGNNITGVSVSTPVSNTYT 963
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GNDV+ G + N+ GND G G+DTFF+ + + D
Sbjct: 1408 LNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 1461
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ D SD L +D + +++ S+ Y
Sbjct: 1462 KANPVDKSSDASVLNLSD-LLSDADLETNSLDNYL 1495
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ N + + + G++GND + G N+ G D F SG D
Sbjct: 1398 SLTMLANNPQLNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDD------ 1451
Query: 312 PSYLYKIYRFENAIIVYDANEHK---QDFLSDVE 342
+ I F+ + ++ D LSD +
Sbjct: 1452 DGGVDTITDFKANPVDKSSDASVLNLSDLLSDAD 1485
>gi|257486705|ref|ZP_05640746.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 751
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 9/171 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 539 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 592
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G +G D + +
Sbjct: 593 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGGSGADTLIGGTG 650
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + ++NE D L D+ F D ++ T +++ +
Sbjct: 651 ADRYVFNNSNETGLDGLRDI-INGFKAAEGDKLDFTGFDARPLTDAHDAFV 700
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 368 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 427
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + ++++ AS L G D+
Sbjct: 428 VSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTG 481
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 364 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTE 416
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + +GN +V+ GN++NNV ++G
Sbjct: 417 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGA 476
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 477 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 536
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 537 NATGNTLDNLIYAGAGDNVMDGRDGN 562
>gi|207742088|ref|YP_002258480.1| rtx family calcium-binding cytotoxins and bacteriocins protein
[Ralstonia solanacearum IPO1609]
gi|206593475|emb|CAQ60402.1| probable rtx family calcium-binding cytotoxins and bacteriocins
protein [Ralstonia solanacearum IPO1609]
Length = 1256
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 54/151 (35%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
IG N S ++ N + +++ G +G+DV+ G N+ +
Sbjct: 662 ATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGDAGDDVIYGGDGNDFLQGND 721
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G D DG +G DT + A + + + N+ D + ++D +
Sbjct: 722 GADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSA 781
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + A E ++ G D+ S+
Sbjct: 782 GKLNVIQFKDGVAPSEVVVTRSGSDLVLSIA 812
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 3/147 (2%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ +V + D+ D T G N + ++ G + I
Sbjct: 651 SVTGFDVFAAAATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGDAGDDVIYG 710
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G+ G D + G + ++ + +GND DG +G DT + Y + +
Sbjct: 711 GDGNDFLQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQ 770
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCI 351
+Y + L ++F D
Sbjct: 771 DFIYSDYDTSAGKL---NVIQFKDGVA 794
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND + G + N+ + +GND DG +G DT
Sbjct: 883 NVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEG 942
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ Y + + +Y + + L ++F D
Sbjct: 943 GNDTYLFGKGDGQDFIYSDYDTSANKL---NVIQFKDGV 978
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND++ G + N+ + +GNDV DG +G DT
Sbjct: 1068 NVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLSGEG 1127
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ Y + + +Y + + L ++F D
Sbjct: 1128 GNDTYLFGKGDGQDFIYSDYDTSANKL---NVIQFKDGV 1163
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 5/178 (2%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + +P Q + G DL I D +S ++ GY + TI
Sbjct: 825 YWDDTANPYNPIQQVKFSDG--TTWDLATIKAKALIGD---DSSQTLVGYTEADTINALG 879
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++V G G+DV+ G + N+ + GND G + D + + + +
Sbjct: 880 GNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLS 939
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N+ D + ++D + + + + E ++ G D+ S+
Sbjct: 940 GEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIA 997
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 5/178 (2%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + +P Q + G DL I D +S ++ GY + TI
Sbjct: 1010 YWDDTANPYNPIQQVKFSDG--TTWDLATIKAKALIGD---DSAQTLVGYTEADTINALG 1064
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++V G G+DV+ G + N+ + GND+ G + D + + + + +
Sbjct: 1065 GNDNVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLS 1124
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N+ D + ++D + + + + E ++ G D+ S+
Sbjct: 1125 GEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIA 1182
>gi|73950335|ref|XP_544383.2| PREDICTED: similar to matrix metalloproteinase 14
(membrane-inserted) [Canis familiaris]
Length = 741
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 64/209 (30%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + E R A W + L F+E
Sbjct: 195 YALTGRKWNNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPY 247
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 248 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 307
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + + +M D+
Sbjct: 308 STDLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQ----------------WMDTDT 351
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D+ +Q++YG P G
Sbjct: 352 FQLPE---------DDLRGIQQLYGTPDG 371
>gi|294678187|ref|YP_003578802.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294477007|gb|ADE86395.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 622
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 56/187 (29%), Gaps = 9/187 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYE 257
G G+++ + + G D D + IDL S +
Sbjct: 220 TGGTGDDMLSAGAMDVSNDL---LLGGAGLDTADYRAVTAASGILIDLLAGSAVNA---- 272
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++ + +E+ +G +G D ++G + N G D G +G D +
Sbjct: 273 AHVGTDRLVGVENAIGGAGADTILGTAGANRIDGGLGADDLRGGTGNDVYVVDRAGDRIT 332
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
A +++E L + + + A+ L +G
Sbjct: 333 -EAAGGGTETVIATYSGHTLGANLENLVLDGAVMVGSGNALDNRVTGNAAANLLAGGLGN 391
Query: 378 DVFESMK 384
D+ M
Sbjct: 392 DLLRGMA 398
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 7/140 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLN-TESWSSIGGY 256
G GN++Y ++ GG + + + N +L + G
Sbjct: 315 GGTGNDVYVVDRAGDRITEA----AGGGTETVIATYSGHTLGANLENLVLDGAVMVGSGN 370
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + + G GND++ G + + G+D DG +G D A + Y
Sbjct: 371 ALDNRVTGNAAANLLAGGLGNDLLRGMAGTDTLQGGDGHDTLDGGTGADRMQGGAGNDSY 430
Query: 317 KIYRFENAIIVYDANEHKQD 336
+ + I D
Sbjct: 431 LVDESGDRIFETVTPSGTTD 450
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 59/188 (31%), Gaps = 32/188 (17%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + G ++ + I T+ +++ G + ND ++G + N+ GND +G++G DT
Sbjct: 159 TGAAIDWGSFDIDNVIRGTTLADTLTGGALNDEILGLAGNDSLAGGEGNDTLNGAAGRDT 218
Query: 307 FFYYAPSY-----------------------LYKIYRFENAIIVY-------DANEHKQD 336
Y+ + I++ +A D
Sbjct: 219 LTGGTGDDMLSAGAMDVSNDLLLGGAGLDTADYRAVTAASGILIDLLAGSAVNAAHVGTD 278
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
L VE + + ++ +DL G D V + G
Sbjct: 279 RLVGVENAIGGAGADTILGTAGANRIDGGLGADDLRGGTGNDVYVVDRAGDRITEAAGGG 338
Query: 395 RDITFDSY 402
+ +Y
Sbjct: 339 TETVIATY 346
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 65/173 (37%), Gaps = 30/173 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIY-----DSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G GN+ Y ++ +T+ D+GG D + ++ + Y +
Sbjct: 423 GGAGNDSYLVDESG--DRIFETVTPSGTTDAGGRDHVSSSVTINLDAYAGVR-------- 472
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ +N+T+ I + G++ N+ +IGN A+N+ GNDV G D +
Sbjct: 473 -FVENVTLTGTYTI-NATGNALNNRIIGNDADNLLAGGLGNDVITTGLGNDVIVFNTALG 530
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + DF + +++R D ++ + + A+
Sbjct: 531 ASNV-------------DMITDFYAGYDQIRLDDAIFTTLARGTLADSAFVAN 570
>gi|291561206|emb|CBL40005.1| hypothetical protein CK3_01310 [butyrate-producing bacterium SS3/4]
Length = 192
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLR 412
+ Y +Y DL IG D HFY G++EGR FD +Y + DL+
Sbjct: 108 YSRVFDPDYYYNTYPDLQTAIGTDKLALFTHFYNSGMAEGRKGCAEFDVNVYKENNTDLQ 167
Query: 413 NVFGSDRGAAARHYITHGVKEGRN 436
FGSD HY+ G EGR
Sbjct: 168 TAFGSDLRKYYEHYMNTGWAEGRT 191
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
D + + L FD Y +Y DL+ G+D+ A H+
Sbjct: 82 TDNSSAGNSSTAAAEAPSITYDLMNSYSRVFDPDYYYNTYPDLQTAIGTDKLALFTHFYN 141
Query: 429 HGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
G+ EGR A F Y ++ DL AF ++ +H+ N G EGR
Sbjct: 142 SGMAEGRKGCAEFDVNVYKENNTDLQTAFGSD---LRKYYEHYMNTGWAEGRT 191
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ + + FD Y +Y DL+ G+D+ A H+ G+
Sbjct: 86 SAGNSSTAAAEAPSITYDLMNSYSRVFDPDYYYNTYPDLQTAIGTDKLALFTHFYNSGMA 145
Query: 517 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
EGR A F Y ++ DL AF ++ +H+ N G+ EGR+
Sbjct: 146 EGRKGCAEFDVNVYKENNTDLQTAFGSD---LRKYYEHYMNTGWAEGRT 191
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 53/149 (35%), Gaps = 6/149 (4%)
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
D + +G H+ G +G D + S AA IT+ +
Sbjct: 47 DNKNKSGLGSYHYHCNGHPAHLHTNGVCPYAVGGQTDNSSAGNSSTAAAEAPSITYDLM- 105
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTS 575
F Y ++ DL A A HF N G EGR F+ ++Y +
Sbjct: 106 NSYSRVFDPDYYYNTYPDLQTAIGTDK---LALFTHFYNSGMAEGRKGCAEFDVNVYKEN 162
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
DL FGSD +HY+ G EGR
Sbjct: 163 NTDLQTAFGSDLRKYYEHYMNTGWAEGRT 191
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 7/101 (6%)
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
A + + S F+PD Y +Y DL G+D+ A H+ GM EGR
Sbjct: 92 TAAAEAPSITYDLMNSYSRVFDPDYYYNTYPDLQTAIGTDKLALFTHFYNSGMAEGRKG- 150
Query: 607 ISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ +++ + DL +F Y Y G
Sbjct: 151 ------CAEFDVNVYKENNTDLQTAFGSDLRKYYEHYMNTG 185
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 22/63 (34%)
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D L+ + + + Y + DL G D+ + +H+ G +E
Sbjct: 129 GTDKLALFTHFYNSGMAEGRKGCAEFDVNVYKENNTDLQTAFGSDLRKYYEHYMNTGWAE 188
Query: 394 GRD 396
GR
Sbjct: 189 GRT 191
>gi|329851467|ref|ZP_08266224.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840313|gb|EGF89885.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1399
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 56/161 (34%), Gaps = 9/161 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + T+ + GS+GND + G + N++ G D G +G DT F A
Sbjct: 202 ITGGSGHDTLTGAGQADFFAGSAGNDQLSGRAGNDLLDGGDGEDWLTGGAGNDTLFGGAG 261
Query: 313 SYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
S A+ V + N D ++ +E L + + + +
Sbjct: 262 SDTADYSAAGGAVQVDLTLNTAQNTNGGGIDVVTGIEHLIGSAFTDLFIGTSAANRFDGG 321
Query: 366 ASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
A + L G D +S EG D F + Y
Sbjct: 322 AGADTLAGGAGDDSYVVDSAADEVIEKAGEGVDHVFAAISY 362
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 62/174 (35%), Gaps = 7/174 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
E T++ G D D + GG +DL + + G I T IE
Sbjct: 244 EDWLTGGAGNDTLFGGAGSDTADYSAAGGAVQ-VDLTLNTAQNTNGG----GIDVVTGIE 298
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++GS+ D+ IG SA N F +G D G +G D++ + + E V+
Sbjct: 299 HLIGSAFTDLFIGTSAANRFDGGAGADTLAGGAGDDSYVVDSAADEVIEKAGEGVDHVFA 358
Query: 330 ANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A + S VE L I++ + L L G D+
Sbjct: 359 AISYAL-TGSFVEFLTLTGTSNINATGNGMNNFLIGNDGNNVLDGATGHDLMAG 411
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G++ N +A +S+ G +G D + G N+ +GND G +G D
Sbjct: 565 LQGWDGNDALAGGAGNDSLSGGTGRDSLSGQDGNDTLSGGTGNDAVTGGNGTDHLDGGTG 624
Query: 313 SYLYKIYRFENAIIVYDANEHKQ 335
++ +V + + Q
Sbjct: 625 DDTLAGGTGNDSYVVDSSADSIQ 647
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 78/247 (31%), Gaps = 37/247 (14%)
Query: 195 YGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDL 245
Y A S N + T+ G D LD ++ G Y
Sbjct: 847 YNATGNSTANTLTGNNSNNWLNGVRGNDTLEGRLGKDTLDGGDGKDSMSGGAGDDVYYVD 906
Query: 246 NTESWSSIGGYEKNMTI-------AQHTVIESVVG--SSGNDVVIGNSANNVFFESSGND 296
+ E N TI T +E + +SG+ + GN NN + GN+
Sbjct: 907 SAGDVVFELVGEGNDTIRTYGSYSLAGTEVERLHLQPASGDFTLTGNDLNNELAANGGNN 966
Query: 297 VFDGSSGLDTFFYYAPSYLYKIY-------RFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ DG +G DT + Y + F+N I + + ++ +
Sbjct: 967 LLDGGAGADTLRGGLGNDTYVVDDKGDTTNDFDNGGIDLVLSSSSHTAGAYIDDVTLTGS 1026
Query: 350 CIDSVNVKQ----------RSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDI 397
+ ++L A + L +G D V +S+ G ++G D
Sbjct: 1027 SNANATGNDLDNRLTGNIGNNLLNGLAGIDTLTGGLGNDTYVIDSLSDVVNEGAAQGTDE 1086
Query: 398 TFDSYLY 404
+ + Y
Sbjct: 1087 IWSTLSY 1093
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 62/186 (33%), Gaps = 9/186 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-K 258
G LG++ Y I + GG D + +T G L +I
Sbjct: 792 GGLGDDTYVITSTGD----VVIEAAGGGYDTVRITYFGNGNYV--LAEGEIEAIALVSAG 845
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N ++ ++ G++ N+ + G N+ G D DG G D+ A +Y +
Sbjct: 846 NYNATGNSTANTLTGNNSNNWLNGVRGNDTLEGRLGKDTLDGGDGKDSMSGGAGDDVYYV 905
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ +V++ D + A ++ ++++ S + ++
Sbjct: 906 DSAGD--VVFELVGEGNDTIRTYGSYSLAGTEVERLHLQPASGDFTLTGNDLNNELAANG 963
Query: 379 VFESMK 384
+
Sbjct: 964 GNNLLD 969
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 9/127 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA-QHTVIESVV- 272
T+ G+D + V + I +++ A IE++
Sbjct: 701 GGAGNDTLSGGFGNDTYHVDSASDV-----VVEGGNQGIDTVVSSVSFAMAGRWIENLTL 755
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
S N + GN NNV ++G+++ DG+ G DT Y I + +V +A
Sbjct: 756 TGSANLALTGNELNNVLTGNAGHNLIDGALGNDTMAGGLGDDTYVITSTGD--VVIEAAG 813
Query: 333 HKQDFLS 339
D +
Sbjct: 814 GGYDTVR 820
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 2/113 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G++ N+ + G NV +GND G G DT+ + S + + V +
Sbjct: 681 ATGNALNNFIAGWDNANVLDGGAGNDTLSGGFGNDTYHVDSASDVVVEGGNQGIDTVVSS 740
Query: 331 NEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+E L + + ++L A + + +G D
Sbjct: 741 VSFAMAG-RWIENLTLTGSANLALTGNELNNVLTGNAGHNLIDGALGNDTMAG 792
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 66/217 (30%), Gaps = 29/217 (13%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI----G 282
G+D+L + G +N + ++ G + + + G G+D++ G
Sbjct: 73 GNDVLSDSSGGSTQN----GGTGFDTLTGGSDADVLNGGDHGDQLEGGGGSDILTDGAAG 128
Query: 283 NSANNVFFESSGNDVF---------DGSSGLDTFFYY-APSYLYKIYRFENAIIVYDANE 332
N+ + +G+D+ DG +GLD + S A
Sbjct: 129 NTDQDTLMGGAGDDILLSYGGADRVDGGAGLDAVVLNLSASSQAVSLDMAQAATASGMTL 188
Query: 333 HKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYE 388
L ++E Q +A + L G D+ + + +
Sbjct: 189 DSGTVLVNIELGEITGGSGHDTLTGAGQADFFAGSAGNDQLSGRAGNDLLDGGDGEDWLT 248
Query: 389 FGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRG 420
G G D F D+ Y + ++ +
Sbjct: 249 GGA--GNDTLFGGAGSDTADYSAAGGAVQVDLTLNTA 283
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 56/164 (34%), Gaps = 14/164 (8%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T + G+ N+ +IGN NNV ++G+D+ G G DT+F A F
Sbjct: 376 GTSNINATGNGMNNFLIGNDGNNVLDGATGHDLMAGGLGDDTYFVQAAGDNVVEEHFAGN 435
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ----------RSILEYTASYEDLIQV 374
+Y + F VE L S ++LE + L
Sbjct: 436 DTIYSTVSYSL-FGRAVETLILTGAAHSSATGNSLANVLTGNSGNNLLEGGGGKDTLTGG 494
Query: 375 IGQD--VFESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVF 415
+G D V S G EG D S Y L + + V
Sbjct: 495 LGNDTYVINSAGDVIVEGAGEGIDTVRASIHYTLAADSAIEAVV 538
Score = 44.0 bits (102), Expect = 0.082, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 8/150 (5%)
Query: 199 KGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G+ GN+ Y + ++ GDDL+ D L+GG + +
Sbjct: 6 TGTPGNDTYTGTSDNDTLNGNSGQDSLQGGFGDDLVTGDDGDDHLLGGWGSDSLSGGGGY 65
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N ++ + + G +G D + G S +V D +G G D
Sbjct: 66 DVLDGEFGNDVLSDSSGGSTQNGGTGFDTLTGGSDADVLNGGDHGDQLEGGGGSDILTDG 125
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
A + A + D +
Sbjct: 126 AAGNTDQDTLMGGAGDDILLSYGGADRVDG 155
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 65/198 (32%), Gaps = 64/198 (32%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------- 252
G LGN+ Y ++ + + +D+GG DL+ + YID T + SS
Sbjct: 979 GGLGNDTYVVDDKGDTTN----DFDNGGIDLVLSSSSHTAGAYIDDVTLTGSSNANATGN 1034
Query: 253 -----IGGYEKNMTIAQHTVIESVVGSSGNDVV--------------------------- 280
+ G N + I+++ G GND
Sbjct: 1035 DLDNRLTGNIGNNLLNGLAGIDTLTGGLGNDTYVIDSLSDVVNEGAAQGTDEIWSTLSYS 1094
Query: 281 -------------------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
GN +NV ++ +V DG +G DT Y +
Sbjct: 1095 LAGRQVETLTLLTGGAVAATGNELDNVLNGNANGNVLDGDAGADTMAGGNGQDTY--FVD 1152
Query: 322 ENAIIVYDANEHKQDFLS 339
+ ++ +A+ +D ++
Sbjct: 1153 NSLDVIVEADRGGEDQVT 1170
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 9/93 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------NVFFESSGNDVFDGSS 302
+ G E + + T + G+ N+ ++GN+ N + GND+ DG +
Sbjct: 1248 NASGTEVDRIVLSGTDNINATGNGLNNQLLGNAGNNLLEGGGGNDSITGGIGNDILDGGT 1307
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G DT + + +A +
Sbjct: 1308 GADTLQAGSAAIPSSSIISATGSTTTEALSGRT 1340
Score = 37.8 bits (86), Expect = 5.6, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 46/146 (31%), Gaps = 1/146 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G I S G+S +V+ GNS NN+ G D G G DT+ +
Sbjct: 445 SLFGRAVETLILTGAAHSSATGNSLANVLTGNSGNNLLEGGGGKDTLTGGLGNDTYVINS 504
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYED 370
+ E V + + S +E + I++ + L +
Sbjct: 505 AGDVIVEGAGEGIDTVRASIHYTLAADSAIEAVVLTGSSKINATGNALDNALTGNSGNNR 564
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRD 396
L G D GRD
Sbjct: 565 LQGWDGNDALAGGAGNDSLSGGTGRD 590
>gi|259414788|ref|ZP_05738711.1| poly(beta-D-mannuronate) C5 epimerase 2 [Silicibacter sp.
TrichCH4B]
gi|259349239|gb|EEW60986.1| poly(beta-D-mannuronate) C5 epimerase 2 [Silicibacter sp.
TrichCH4B]
Length = 656
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 13/195 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
+ T+ GGDD L+ L+ + S + G N ++A
Sbjct: 406 NDTITGTIGDDTLEGGGGDDTLNGGEGADT-----LDGGAGSDTLNGGAGNDSLAGGDGA 460
Query: 269 ESVVGSSGNDVVIGNSAN----NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++++G G+D + G + +V + GND DG G D A + + +
Sbjct: 461 DTLIGGDGDDTLSGGDSESDVRDVIYGGVGNDNIDGGYGNDELRGDAGNDSIEGGFGSDT 520
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+I D ++ + A + + + + + + ++
Sbjct: 521 VIGGDGDDVLTGSALSDQVFGGAGSDFVNGGFGHDRVNGGGDADKFFHLGVANHGSDWIQ 580
Query: 385 HFYEFGLSEGRDITF 399
+ +EG + F
Sbjct: 581 DYD---AAEGDVLVF 592
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 16/154 (10%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNTE 248
G++G++ + T+ G D L+ L G I + +
Sbjct: 410 TGTIGDDTLEGGGGDDTLNGGEGADTLDGGAGSDTLNGGAGNDSLAGGDGADTLIGGDGD 469
Query: 249 SWSSIGGYEKNM--TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S G E ++ I +++ G GND + G++ N+ G+D G G D
Sbjct: 470 DTLSGGDSESDVRDVIYGGVGNDNIDGGYGNDELRGDAGNDSIEGGFGSDTVIGGDGDDV 529
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
A S F A + D ++
Sbjct: 530 LTGSALSDQ----VFGGAGSDFVNGGFGHDRVNG 559
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 15/160 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA G+ + +S IY G+D +D + G
Sbjct: 459 GADTLIGGDGDDTLSGGDSESDVRDVIYGGVGNDNIDGGYGNDE-------------LRG 505
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N +I ++V+G G+DV+ G++ ++ F +G+D +G G D +
Sbjct: 506 DAGNDSIEGGFGSDTVIGGDGDDVLTGSALSDQVFGGAGSDFVNGGFGHDRVNGGGDADK 565
Query: 316 Y--KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+ + + D + + D L DQ +
Sbjct: 566 FFHLGVANHGSDWIQDYDAAEGDVLVFGNSSATIDQFQIN 605
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD---------TFFYYAPSYLYKIY 319
+ G+SG+D++ ++ + GND +G +G D T A I
Sbjct: 172 DVAYGTSGDDLIETGDGDDDIAGNGGNDTINGGAGEDWMVINAHNATLDGGADFDDAVIV 231
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
N I+ D + +L + + + +E +I+ G+
Sbjct: 232 DTSNTAILVDYSAGTTG-----NQLHISGMTDLEDDSTTQYTVETANVERAVIEATGE 284
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 40/137 (29%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + I + + G+ GND + G + + ++ N DG + D S
Sbjct: 175 YGTSGDDLIETGDGDDDIAGNGGNDTINGGAGEDWMVINAHNATLDGGADFDDAVIVDTS 234
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + L D ++ + + + E + D
Sbjct: 235 NTAILVDYSAGTTGNQLHISGMTDLEDDSTTQYTVETANVERAVIEATGEVLIAGNDAAN 294
Query: 374 VIGQDVFESMKHFYEFG 390
+ + + F G
Sbjct: 295 RVRFNEMPEVFTFNGGG 311
>gi|258619934|ref|ZP_05714975.1| RTX protein, putative [Vibrio mimicus VM573]
gi|258587804|gb|EEW12512.1| RTX protein, putative [Vibrio mimicus VM573]
Length = 1108
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 14/151 (9%)
Query: 245 LNTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
LN S+ G N I ++ + G SGND + G N+ +GND D
Sbjct: 931 LNITGASNAYVDIAHGGGGNDRIYGQGGVDLMFGGSGNDYIYGGEGNDGLRGGTGNDSLD 990
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAI-----IVYDANEHKQDFLSDVERL----RFADQC 350
G G D + + E+ + + + DF +++ F+D+
Sbjct: 991 GGVGNDILIGGLGNDILTGGEGEDLFKWVDRDLDGSKDRITDFTIGEDKIDLSDLFSDES 1050
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ ++E T +D VI + V E
Sbjct: 1051 RTLDQLLNSHVIEITEKGQDSEIVINKSVTE 1081
>gi|194709131|pdb|3BA0|A Chain A, Crystal Structure Of Full-Length Human Mmp-12
Length = 365
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 4 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 56
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 57 VFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 115
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 116 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 149
Query: 188 IVAVQKIYGAPKGS 201
I +Q +YG PK +
Sbjct: 150 IRGIQSLYGDPKEN 163
>gi|75906805|ref|YP_321101.1| Integrins subunit alpha [Anabaena variabilis ATCC 29413]
gi|75700530|gb|ABA20206.1| Integrins alpha chain [Anabaena variabilis ATCC 29413]
Length = 1019
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 59/200 (29%), Gaps = 25/200 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG------------- 254
D I D + L + + ++I
Sbjct: 666 NDSFDGGDGRDAILIQGGANTDTITFNLTNPSNQLASIPGTTITNIETFDLRTFVGTVTF 725
Query: 255 -GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N TI +++ G +G+D + G + ++ GND+ G SG +T A +
Sbjct: 726 IGGSGNDTIYGGAGDDNLNGDAGDDNLNGGAGDDTLIGGDGNDILTGGSGTNTLTGGAGN 785
Query: 314 YLYKIYRFENAIIVYDANEHKQD---------FLSDVERLRFADQCIDSVNVKQRSILEY 364
Y I + ++ + QD ++VE L ++ + +
Sbjct: 786 DRYYID--NASDVITEDINGGQDEVFATVSYTLAANVEALTLKGTAVNGTGNASNNNIRG 843
Query: 365 TASYEDLIQVIGQDVFESMK 384
L + G D
Sbjct: 844 NNQDNLLEGLDGNDNLTGNA 863
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 9/166 (5%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L T + G N S ++I G ++ + +++ G++GNDV+IG + N+
Sbjct: 824 TLKGTAVNGTGN------ASNNNIRGNNQDNLLEGLDGNDNLTGNAGNDVLIGGNGNDTL 877
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
GNDV G +G D F + + + DF V+ +
Sbjct: 878 NGGIGNDVLIGGAGSDRLFGGDGADTFGFGTGNAFSSAGFGIDTIADFAVGVDAIELDKA 937
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
++ + + + + V + + + L GR
Sbjct: 938 SFSAL---TSVVGDGFSVGSEFASVSNDTLVATSNALIVYSLGSGR 980
>gi|149053668|gb|EDM05485.1| matrix metallopeptidase 28 (epilysin) (predicted) [Rattus
norvegicus]
Length = 475
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 43/142 (30%), Gaps = 21/142 (14%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GHKWYKQHLSYRLVNWPKSLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD+ + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMHPGSYNGGYPVY 147
HEIGH LGL H + Y
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPY 261
>gi|73955220|ref|XP_536598.2| PREDICTED: similar to Collagenase 3 precursor (Matrix
metalloproteinase-13) (MMP-13) [Canis familiaris]
Length = 470
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 65/187 (34%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 108 RTLKWSKTNLTYRIVNYTPDLTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGTA 160
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 161 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 219
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D D + +
Sbjct: 220 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGD--EDPNPRHP 277
Query: 181 ATPMVSD 187
TP D
Sbjct: 278 KTPDKCD 284
>gi|307944001|ref|ZP_07659343.1| iron-regulated protein FrpC [Roseibium sp. TrichSKD4]
gi|307772842|gb|EFO32061.1| iron-regulated protein FrpC [Roseibium sp. TrichSKD4]
Length = 612
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 19/210 (9%)
Query: 194 IYGAPK------GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTL----IGGVKN 241
+YG GS + +Y + T++ G+D L+ + G
Sbjct: 312 LYGNNGEDDLHGGSGDDALYGGSASDNLYGNSGNDTLFGGQGNDSLNGNNGDDILNGESG 371
Query: 242 YIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+L + + + G N + + + G +G+D + G N+ F GND F G
Sbjct: 372 NDELIGGTGNDTLDGGHGNDILDGEYGNDVIKGGAGDDQLRGGYNNDELFGGHGNDTFYG 431
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH------KQDFLSDVERLRFADQCIDSV 354
+G D ++ + V N+ D L ++ + D
Sbjct: 432 DAGNDVMHGGRGVDTVDYSAYDVDLTVSLHNKKAHGLEIGSDTLKFIDNITSGDGDDFLK 491
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+++ A + + + G+DV
Sbjct: 492 GSSGDNVINGGAGDDTIRGLTGEDVLTGGA 521
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 256 YEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ I TV V+ G+D +IG + N+ + +G+D G++G D +
Sbjct: 3 GTNDDDILNGTVHSDVISGRFGDDTLIGANGNDEVWGGTGDDTLYGNNGNDILYGSGGPN 62
Query: 315 LYKIYRFENA 324
L +I E
Sbjct: 63 LVQITSVEIG 72
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + I+ ++++G++GND V G + ++ + ++GND+ GS G + +
Sbjct: 10 LNGTVHSDVISGRFGDDTLIGANGNDEVWGGTGDDTLYGNNGNDILYGSGGPNLVQITS 68
Score = 40.5 bits (93), Expect = 0.90, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 27/65 (41%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+ +DV+ G ++ ++GND G +G DT + + + N + +
Sbjct: 8 DILNGTVHSDVISGRFGDDTLIGANGNDEVWGGTGDDTLYGNNGNDILYGSGGPNLVQIT 67
Query: 329 DANEH 333
Sbjct: 68 SVEIG 72
>gi|170739973|ref|YP_001768628.1| 5'-nucleotidase domain-containing protein [Methylobacterium sp.
4-46]
gi|168194247|gb|ACA16194.1| 5'-Nucleotidase domain protein [Methylobacterium sp. 4-46]
Length = 980
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 23/234 (9%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY-------KIEVQQKDSP 217
Y + D +G T D+ +Q + ++ +
Sbjct: 621 YMQARYGTADKPYGAVDTASSEDLR-IQ-----NLSVRADTVFNSGRFGTGGGDSLAGTA 674
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIES 270
I+ G+D L + +++GG + DL + + G N ++ +S
Sbjct: 675 GTDEIFGYAGNDTLAGGQGNDSMLGGDGS--DLVSGQDGDDAVLGGAGNDFVSGGAGNDS 732
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G +G+D+V G+ +++ +GND G +G D F A S L + + + +
Sbjct: 733 VNGEAGDDLVFGDEGDDIVDGGAGNDRVYGGTGADRVFGSAGSDLVFGEQGNDFVGAGEG 792
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N+ + E + + L + L +G DV +
Sbjct: 793 NDFASGGAGNDEVHGESGDDYVFGDEGDDQ-LFGGEGRDSLYGGLGSDVLDGDA 845
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 37/109 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + + G G+D + G ++ F ++GND G G D F Y
Sbjct: 850 LAGEQGDDVLMGGAGNDYLSGGLGSDQLFGGDGADLLFGNAGNDSLSGGRGSDIFAYGRG 909
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
I F D + ++ A Q + + V
Sbjct: 910 DGQDVIRDFTVGGSERDVIAFNGGVFTSFAAVQAATQQLGADAVITVGA 958
>gi|284052095|ref|ZP_06382305.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 564
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 19/176 (10%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ G+D + GG + + I G + + +++ G
Sbjct: 378 GDKGNDILWGDDGNDTI----YGGEGDDL---------IFGNDGADLLFGGVGNDTIFGG 424
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--- 331
GND +IG ++ G+D+ G G DT + S + I V +AN
Sbjct: 425 PGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGSDTFAIAEGSGGGSVEEANVIN 484
Query: 332 --EHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDVFESMK 384
D + + L F I + I+ + E L +IG +
Sbjct: 485 DFTGGTDKIGLLGNLTFEQLSITQSEENAGNAIIRNGSDGEFLAVLIGVNSNNLTA 540
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 9/164 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ GN+ + Q + G+DLL G + N L S+ G
Sbjct: 306 GNQGNDTLDGGPGNDTAYGGQDNDLMIGGDGNDLL----FGNLGNDTLLGGPGADSMYGG 361
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N I + + G GND++ G+ N+ + G+D+ G+ G D F +
Sbjct: 362 DGNDCIRGGVGNDLIFGDKGNDILWGDDGNDTIYGGEGDDLIFGNDGADLLFGGVGND-- 419
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
I+ + Q + L F D++ S
Sbjct: 420 TIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGS 463
>gi|148224612|ref|NP_001091444.1| matrix metallopeptidase 20 [Xenopus laevis]
gi|117647503|gb|ABK51705.1| matrix metalloproteinase 20 [Xenopus laevis]
gi|213623536|gb|AAI69876.1| Matrix metalloproteinase 20 [Xenopus laevis]
gi|213626681|gb|AAI69874.1| Matrix metalloproteinase 20 [Xenopus laevis]
Length = 478
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 50/145 (34%), Gaps = 23/145 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ TT + D+ L WS L F +T+ +DI
Sbjct: 116 WQKSTLTYRITKYTTSLSAQDV-------DRAVELGLKAWSDAAPLNFVKTTQGEADIMI 168
Query: 82 ISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + +D + +FD A+ W G G L A HE
Sbjct: 169 SFESGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAERWTTGKN-GFNLFTVAAHEF 227
Query: 129 GHALGLMHPGSYNG-GYPVYGVDND 152
GHALGL H + YP Y +
Sbjct: 228 GHALGLGHSSDPSALMYPTYRYQHP 252
>gi|238785378|ref|ZP_04629365.1| RTX toxin and Ca2+-binding protein [Yersinia bercovieri ATCC 43970]
gi|238713705|gb|EEQ05730.1| RTX toxin and Ca2+-binding protein [Yersinia bercovieri ATCC 43970]
Length = 650
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 14/165 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + N Y+ ++ S TI G++ + L G + I+
Sbjct: 132 GGSQHDDSNIYYRYQLINFSSSTKNTIIL--GENYRNQILGGSQDDIIN----------T 179
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y+ N +I + + GND + G + N+ G+D DG G DT
Sbjct: 180 YDGNDSINSGAGDDIISAGGGNDYITGGAGNDTIHGGQGDDTIDGDEGNDTIHGEQGDD- 238
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
IY E ++ + D + + +A+Q +++ +
Sbjct: 239 -TIYGGEGNDTIHGGQGNNVIHGDDGDDVIYAEQGNNTIYGGNGN 282
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 48/166 (28%), Gaps = 24/166 (14%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
N Y I GG+D + G N TI
Sbjct: 178 NTYDGNDSINSGAGDDIISAGGGNDYI----------------------TGGAGNDTIHG 215
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G GND + G ++ + GND G G + + IY +
Sbjct: 216 GQGDDTIDGDEGNDTIHGEQGDDTIYGGEGNDTIHGGQGNN--VIHGDDGDDVIYAEQGN 273
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+Y N + + + D ++ +Q Y +D
Sbjct: 274 NTIYGGNGNDTIHGGQGQYIIHGGSGDDIIHGEQGQGTIYGNDGDD 319
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 45/174 (25%), Gaps = 14/174 (8%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESW-SSIG 254
N IY I+ GDD++ G + I + W S I
Sbjct: 274 NTIYGGNGNDTIHGGQGQYIIHGGSGDDIIHGEQGQGTIYGNDGDDTIYVGAGRWGSIIK 333
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N I + + G GND + G + +G D+ G +D +
Sbjct: 334 AGTGNDYIVGSIQSDKISGGEGNDTIFGGDGADTISGGAGTDIIHGGDEMDYLMGDDGND 393
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + FA D + + + +
Sbjct: 394 YISGDAGGEHFSTGNHLFGGSG-----NDMIFAGDGGDQIEGDGNNPKDNGRNN 442
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 45/149 (30%), Gaps = 8/149 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-----SWSSIGGYEK 258
+ I+ + S T GG D +D + +YI + + + + G
Sbjct: 357 DTIFGGDGADTISGGAGTDIIHGG-DEMDYLMGDDGNDYISGDAGGEHFSTGNHLFGGSG 415
Query: 259 NMTIAQHTVIESVVGSSGN--DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N I + + G N D N ++ F GND G G D Y
Sbjct: 416 NDMIFAGDGGDQIEGDGNNPKDNGRNNIGDDHLFGGKGNDELIGGRGNDFLAGGHGDDTY 475
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ + I+ + + D
Sbjct: 476 HFFVGDGVNIINEESGGNNILKFDHHFFH 504
>gi|126727753|ref|ZP_01743584.1| hypothetical protein RB2150_00360 [Rhodobacterales bacterium
HTCC2150]
gi|126703009|gb|EBA02111.1| hypothetical protein RB2150_00360 [Rhodobacterales bacterium
HTCC2150]
Length = 867
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 13/214 (6%)
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ-----QKDSP 217
MS + + + T V D YG+ + ++++ D+
Sbjct: 401 MSSLGSWTLEVTDTDAWGDTGTVYDW--TLDFYGSASST--DDVHHFTGDFFALVALDAS 456
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+GG D L+ ++ V I+L+ ++ + G + M I + IE+V+ GN
Sbjct: 457 RGLIEDTNGGIDWLNFSVAS-VGLQINLDAKTI-NATGVAETMIIGATSEIENVMAGDGN 514
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D++ G++ N G+D +G +G D+ F + + D N+
Sbjct: 515 DLLTGDALANEMHGMRGDDTLNGGAGKDSLFGGVGHDDIYGGFHSDKLYGDDNNDLIYGG 574
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + DS+ + + Y D
Sbjct: 575 VGN--DFLYGGADTDSLYGDEGNDKLYGGQGNDF 606
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 69/193 (35%), Gaps = 27/193 (13%)
Query: 191 VQKIYGAPK------GSLGNNIYKIEVQQK-----------DSPFIQTIYDSGGDDLL-- 231
+ K+YG GS ++IY + + K +Y G+D+L
Sbjct: 640 LDKLYGGDGNDVMFGGSDADSIYGGDAEDKLFGNGDVDLLVGGSGNDKLYGHAGNDMLYG 699
Query: 232 ---DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D TL GG N + S S G N I +++ G +G+D + G + N+
Sbjct: 700 GGNDDTLFGGNHNDLMYGGNSADSFFGGAGNDEIYGDDGNDNLKGQAGSDTLDGGAHNDE 759
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
F ND G +G DT + S + I+ D N + E++ +
Sbjct: 760 LFGGGDNDTLTGGTGDDTMSGGSGSDTFIFADGFGTDIITDFNATN-----NAEKIDLSG 814
Query: 349 QCIDSVNVKQRSI 361
+ ++
Sbjct: 815 VSAITDYTDLTTL 827
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 64/174 (36%), Gaps = 23/174 (13%)
Query: 227 GDDLLD-----LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVV 280
GDD L+ +L GGV + D+ S + G + N I + + G + D +
Sbjct: 531 GDDTLNGGAGKDSLFGGV-GHDDIYGGFHSDKLYGDDNNDLIYGGVGNDFLYGGADTDSL 589
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYY----------------APSYLYKIYRFENA 324
G+ N+ + GND F G G D F L K+Y +
Sbjct: 590 YGDEGNDKLYGGQGNDFFYGGDGFDKLFGGTENDRLYGDLKNDKLYGQDGLDKLYGGDGN 649
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+++ ++ + D E F + +D + + Y + D++ G D
Sbjct: 650 DVMFGGSDADSIYGGDAEDKLFGNGDVDLLVGGSGNDKLYGHAGNDMLYGGGND 703
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 6/170 (3%)
Query: 200 GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ + +Y + + +Y G+D++ G + I G +
Sbjct: 619 GTENDRLYGDLKNDKLYGQDGLDKLYGGDGNDVM---FGGSDADSIYGGDAEDKLFGNGD 675
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++ + + + + G +GND++ G ++ F + ND+ G + D+FF A +
Sbjct: 676 VDLLVG-GSGNDKLYGHAGNDMLYGGGNDDTLFGGNHNDLMYGGNSADSFFGGAGNDEIY 734
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + ++ + E D + ++ + S
Sbjct: 735 GDDGNDNLKGQAGSDTLDGGAHNDELFGGGDNDTLTGGTGDDTMSGGSGS 784
>gi|5771541|dbj|BAA83518.1| matrilysin [Sus scrofa]
Length = 267
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 67/197 (34%), Gaps = 48/197 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W++ + Y+ T + +L AL WS + L+F++ S +DI
Sbjct: 104 WTSKIVTYRIVSYTRDLPHVTVNQL-------VTKALKMWSNEIPLSFKKVSWGIADIII 156
Query: 82 ISSNNGYVCTPRYDSRY-------------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD+ + W G G + A HE+
Sbjct: 157 GFARGAHGDAYPFDGPGNTLAHAFAPGPGLGGDAHFDEDEHWSDGGSIGINFLYAATHEL 216
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H N YP YG Y D L+ D
Sbjct: 217 GHSLGLAHSSDPNAVMYPTYG--EVYSKDFKLS------------------------QDD 250
Query: 188 IVAVQKIYGAPKGSLGN 204
I +QK+YG N
Sbjct: 251 INGIQKLYGKRSNPEKN 267
>gi|209549795|ref|YP_002281712.1| cadherin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535551|gb|ACI55486.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 928
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G+D G N+ F +GND G +G+DT + Y N + +
Sbjct: 630 VKTGGGDDYFFGTDGNDRFEGGAGNDALLGGAGIDTAVFAGNFANYTFGM-NNGDHILTS 688
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ D L D+E RFAD D + + L Q + ES + G
Sbjct: 689 AKEGTDTLRDIEIARFADGVYDFAKGTFTADHNAAPTNIQLSQ---TSLLESTPIWTTLG 745
Query: 391 LSEGRDITFDSYLY 404
L +D D Y
Sbjct: 746 LLSAKDADGDPLTY 759
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 52/171 (30%), Gaps = 6/171 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ + S T+ DS DL D + ++I N TI
Sbjct: 24 DVIRFSAANPLSAVALTVSDSSVADLADELGSVSASVR---GSSGPNTITTGAGNDTIVS 80
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G +GND++ G + N+ GND G G D A + + +
Sbjct: 81 GGGADTLSGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVGNDVLKGGAGNDTISDGDY-FS 139
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ N D V + F T DL +
Sbjct: 140 DVAETFNIDAGDGNDKV--ILFTGSFAKISGTIDGGAGTDTLQANDLTGLT 188
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 20/202 (9%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ L + + + + S TI G+D + ++ ++ G
Sbjct: 44 SSVADLADELGSVSASVRGSSGPNTITTGAGNDTI-------------VSGGGADTLSGG 90
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG----LDTFFYYAP 312
N + +++ G GND + G N+V +GND +TF A
Sbjct: 91 AGNDLLNGEAGNDTLNGGDGNDEIYGGVGNDVLKGGAGNDTISDGDYFSDVAETFNIDAG 150
Query: 313 SYLYKIYRFENAIIVYDA---NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
K+ F + D L + + ++ + S+ TA +E
Sbjct: 151 DGNDKVILFTGSFAKISGTIDGGAGTDTLQANDLTGLTIKNVEILQPATSSVTASTAQFE 210
Query: 370 DLIQVIGQDVFESMKHFYEFGL 391
++IG S++ G
Sbjct: 211 SFDKIIGTGSDSSVQLVLTDGA 232
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 21/183 (11%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVKNYIDLNTE---SWSSIGGYEK 258
N Y I SG D + L K ++DL+ E S +SI G
Sbjct: 368 NEYGFTGSSAQLESFDKI--SGTKDAFGSSIAILRLTDKAHVDLSDELGNSRASIFGTVS 425
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + G+ GND+ G+ N+ ++GND G G D F + + K
Sbjct: 426 GIDVKTGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIK- 484
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D ++D + + A + D + + L I
Sbjct: 485 ------------GGAGDDKITDGDNMSTAPEAFDIDAGDGNDAINLQSHSSALSGTIDGG 532
Query: 379 VFE 381
Sbjct: 533 AGT 535
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 13/143 (9%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT------ 306
G N TI + + + G GND + G N+V +G+D + T
Sbjct: 447 FDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIKGGAGDDKITDGDNMSTAPEAFD 506
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + +A+ D L +E + ++ + +T
Sbjct: 507 IDAGDGNDAINLQSHSSALSGTIDGGAGTDTLRVIE-------PTLAPGMEFIGLAGFTI 559
Query: 367 SYEDLIQVIGQDVFESMKHFYEF 389
++++ G +V S F F
Sbjct: 560 KNVEVLETAGAEVLASAAQFESF 582
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 23/64 (35%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + + + + G++GND N+ + GND G G D S
Sbjct: 250 GPNVSGIDVTTGSARDLLTGTAGNDTFDAGDGNDYINGNGGNDRLIGGKGDDVIVDGDVS 309
Query: 314 YLYK 317
L
Sbjct: 310 SLSS 313
>gi|291543330|emb|CBL16439.1| Hemolysin-type calcium-binding repeat (2 copies) [Ruminococcus sp.
18P13]
Length = 888
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 7/164 (4%)
Query: 220 QTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+Y GDD L+ TL GG N I + E + I G + N T + + G
Sbjct: 347 DTLYGDAGDDYLEAGNGTDTLYGGTGNDIFVGGEGINYIYGEDGNDTFYGGNGLNYMYGG 406
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D G + +GND +G +G + + IY + +Y N+
Sbjct: 407 DGDDNFTGGELADYIEGGAGNDTMNGGNGNNEMYGG--DGDDYIYGGDGDDYIYGGNDDD 464
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + ++++ + + Y+ + + +
Sbjct: 465 YIEGGNGDDHLYGGNGVNTIYGGAGNDIIYSGDHGSFLYGGDGN 508
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-- 310
I G + N TI +T +++ G SGND + GN +++ + GND+ DG G D
Sbjct: 31 IYGGDGNDTIEGNTGNDTIYGGSGNDTITGNEGDDMLYGGDGNDMLDGGEGNDILDGGEG 90
Query: 311 -----APSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQ 349
+ + + Y +H D + D E L F D+
Sbjct: 91 DDSLSGGTGDDTLSGGDGDDTYYINADHGNDTIYDSEGRSTLVFGDE 137
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 63/221 (28%), Gaps = 31/221 (14%)
Query: 196 GAPKGSLGNN---IYKIEVQQK--DSPFIQTIYDSGGDDLLDL--------------TLI 236
G + G+N IY + I I GGDD + T+
Sbjct: 219 GNDTITGGDNLNFIYGGDGDDTITGGNGINIIRGEGGDDTITDGTGDGYLDGGDGNDTIH 278
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I + + G + + IA + + + G GND + ++ N+ +GND
Sbjct: 279 AGAGNDILIGGAGNDRLFGEDGDDVIAGNDGDDYLSGGDGNDTLYADAGNDELHGGNGND 338
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSV 354
G G DT + A Y D E + + D+
Sbjct: 339 SLFGGDGDDTLYGDAGDD----YLEAGNGTDTLYGGTGNDIFVGGEGINYIYGEDGNDTF 394
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
Y +D + + E G
Sbjct: 395 YGGNGLNYMYGGDGDD------NFTGGELADYIEGGAGNDT 429
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 23/137 (16%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + TIY G+D + G E + + +
Sbjct: 37 NDTIEGNTGNDTIYGGSGNDTI----------------------TGNEGDDMLYGGDGND 74
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVY 328
+ G GND++ G ++ +G+D G G DT++ A IY E + +V+
Sbjct: 75 MLDGGEGNDILDGGEGDDSLSGGTGDDTLSGGDGDDTYYINADHGNDTIYDSEGRSTLVF 134
Query: 329 DANEHKQDFLSDVERLR 345
+D+ ++
Sbjct: 135 GDELSAEDYALRIDIHS 151
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N I +++ G++GND + G S N+ + G+D+ G G D +
Sbjct: 24 GGEGNDLIYGGDGNDTIEGNTGNDTIYGGSGNDTITGNEGDDMLYGGDGNDMLDGGEGND 83
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ ++++ + D LS +
Sbjct: 84 ILDGGEGDDSL----SGGTGDDTLSGGD 107
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 38/87 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N ++ + + + G +GND + GN N++ +GND +G +G DT+ +
Sbjct: 645 IHAGAGNDGLSGGSGNDELYGEAGNDTLYGNDGNDMLDGGAGNDSLNGGNGEDTYIFAKG 704
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS 339
I + + + + D ++
Sbjct: 705 YAQDTINEWGSDHSIVMLTDINSDEIT 731
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I + + W +I G + + I + + G SGND + G + N+ + + GND+ DG
Sbjct: 626 IIGTDADEWLAIQGNDGGV-IHAGAGNDGLSGGSGNDELYGEAGNDTLYGNDGNDMLDGG 684
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIV 327
+G D+ Y + +
Sbjct: 685 AGNDSLNGGNGEDTYIFAKGYAQDTI 710
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 40/136 (29%), Gaps = 8/136 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G +++ I + + G GND + G N + G+D G +G++
Sbjct: 196 IEGTDEDDVITGGSGFNIIKGGDGNDTITGGDNLNFIYGGDGDDTITGGNGINIIRGEGG 255
Query: 313 SYLYKIYRFENAIIVYDAN-----EHKQDFL---SDVERLRFADQCIDSVNVKQRSILEY 364
+ + D N D L + +RL D L
Sbjct: 256 DDTITDGTGDGYLDGGDGNDTIHAGAGNDILIGGAGNDRLFGEDGDDVIAGNDGDDYLSG 315
Query: 365 TASYEDLIQVIGQDVF 380
+ L G D
Sbjct: 316 GDGNDTLYADAGNDEL 331
>gi|291383995|ref|XP_002708614.1| PREDICTED: matrix metalloproteinase 20 [Oryctolagus cuniculus]
Length = 483
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 75/216 (34%), Gaps = 51/216 (23%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L + W + Y+ T+ F++ + AL W
Sbjct: 97 KPRCGVPDVANYRLFPGEPKWKKNTLTYRVAKYTSSMTPFEVDK-------AIEMALRAW 149
Query: 63 SKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKAD 108
S V L+F + +DI + + +D + +FD A+
Sbjct: 150 SSAVPLSFVRVNAGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAE 209
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W G G L A HE GHALGL H + YP Y N + + +
Sbjct: 210 KWTMGTN-GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPFG----------FRL 258
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
P+D D+ +Q +YG K LG
Sbjct: 259 PKD----------------DVKGIQALYGPRKPFLG 278
>gi|157130903|ref|XP_001662055.1| matrix metalloproteinase [Aedes aegypti]
gi|108881897|gb|EAT46122.1| matrix metalloproteinase [Aedes aegypti]
Length = 479
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 47/191 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W+ + Y + + ++ +++ R A +WS V L F E+ S +DI+
Sbjct: 138 WNKRHLTYNVAKVPSATTPSNV-------KKLLRTAFQQWSNVTLLDFTESNSPKADIRI 190
Query: 82 ISSN----------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + + + E + + Y + L H A+HEIGHA
Sbjct: 191 LFDDHRSKVREHLRGSATQDAIFTHASYPEKGVIRFNSKYYTKNRDEFL-HTAMHEIGHA 249
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LG+ H S S+M F+ + P V D+ AV
Sbjct: 250 LGMSHS-------------------SSRASIMYPFLDS--------HFSELPQV-DVDAV 281
Query: 192 QKIYGAPKGSL 202
Q YG +
Sbjct: 282 QLKYGRRYQTR 292
>gi|307825605|ref|ZP_07655823.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
gi|307733491|gb|EFO04350.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
Length = 2762
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 78/230 (33%), Gaps = 30/230 (13%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGG--DDLL------DLTLIGGVKNYIDLNTESWSSIGG 255
+++Y Y SGG +D D+ + + + ++
Sbjct: 2064 DDLYGNNGNDLLDGGAGNDYLSGGSGNDTYIIDSLGDVIAENADEGTDTVQSSISYTLNA 2123
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+N+ + I + G+ ++V+IGNSA N GND DG SG DT +
Sbjct: 2124 NVENLALTGTAAI-NGTGNGLDNVLIGNSAANTLTGGLGNDTLDGGSGADTLIGGLGNDT 2182
Query: 316 YKIYRFENAIIVYDANEHKQDFL---------SDVERLRFADQCIDSVNVKQ-------- 358
Y + + + A + + D + S +E L +
Sbjct: 2183 YVVDDLGDVVKETSALKTEIDTVQSSITYTLGSKLENLTLTGTSAINGTGNSLNNTLTGN 2242
Query: 359 --RSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLY 404
+IL A + LI +G D V ++ G EG D S Y
Sbjct: 2243 SGDNILNGGAGADHLIGGLGNDTYVVSNVNDAVTEGDDEGIDTVQSSVTY 2292
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 13/161 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEK------NMTIAQHTVIESVVGSSGNDVVIGNSA 285
D TL N +DL T +S+ + +S+ G SG+D++ G
Sbjct: 926 DATLQFAKGNQLDLETLVGASLTTALNLQLDNSGGKLYGGAGADSLHGGSGDDMLSGAWG 985
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++ +GND G +G D A + Y++ A ++ D Q+ + +
Sbjct: 986 DDTLSGGAGNDTLIGGAGRDLLLGGAGNDAYQLSATSGADLITD--TEGQNIIRFAADIS 1043
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
A+ + ++ + + L + V + + H+
Sbjct: 1044 AANLTVSTLTMAGQPALR-----MKVNGVEAATITSGVDHY 1079
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 44/252 (17%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-------------GSLGNNIYKIEVQ 212
F ++ S Y T ++ A+ + YG +++
Sbjct: 1495 FSNSNTYKTLSVHYLYT--DQEMHALTEFYGTNNLQNPYIYTESPIFTHTSTTTHQVATA 1552
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIG-----------GVKNYIDLNTES-----------W 250
+P T YD G D + + +G +D+ +
Sbjct: 1553 LSVTPADGTGYDIQGADPVSFSQLGILPVTLAVTGYYSDAGVDIINGGEGDNTITLSDDF 1612
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY- 309
+ N TI + + G SG+D++IG+ +++ F SGND+ +G +G D ++
Sbjct: 1613 GIVHAGGGNDTIQSYARAALLDGGSGDDLIIGSYYDDIIFGGSGNDLLEGGAGNDRYYVM 1672
Query: 310 ---YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+Y D+N D ++ F+ S ++ + Y
Sbjct: 1673 ADDTGTDLIYDTGFSGGYGGGIDSNTVVFDKGINLSSFNFS---WGSESLPASNWGSYDY 1729
Query: 367 SYEDLIQVIGQD 378
+ L Q +
Sbjct: 1730 NNIKLFQTLDMS 1741
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 14/187 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
G G++ + + F TI + G D + I
Sbjct: 600 GGAGDDDISGDADYVATDFNWTIATTNGIRQYSPVVGDPAPADFGADVIYAGAGDDYVWA 659
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N + +S+ G GNDV++G + ++ G+DV G +G DT A +
Sbjct: 660 G-QGNDVLFGEDGNDSLNGQEGNDVIVGGAGVDIIGGQQGDDVLIGGTGNDTLVGGAGND 718
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y R + V D ++ L F + + LE D + +
Sbjct: 719 TYIFNRGDGRDTVIDPDKDS--------NLLFGEGISAGDITLRLGSLELDLGNGDQVHI 770
Query: 375 IGQDVFE 381
G D +
Sbjct: 771 DGFDPND 777
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 75/216 (34%), Gaps = 31/216 (14%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G LGN+ Y ++ K++ + T D+ + TL V+N I + + G
Sbjct: 2421 GGLGNDTYVVDNASDVVKETSTLSTEIDT-VQSSVSYTLGSNVENLILTGAAAINGTGNS 2479
Query: 257 EKNMTIA--------QHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFD 299
N I + + G GND + GN+ N++ + ND + D
Sbjct: 2480 LNNQLIGNSGDNVLTGGKGSDLLNGDLGNDTLKGNAGNDILQGGADNDSLSDTAGTNLLD 2539
Query: 300 GSSGLDTFFYYA-------PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G SG DT A + I A I+ D ++ D +
Sbjct: 2540 GGSGADTLSGNAANEMFVGGTGNDTITTGNGADIIAFNRGDGMDVVNGG---VGTDNTLS 2596
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
Q + L + S +DLI G ++ +Y
Sbjct: 2597 LGGGIQYADLALSKSGKDLIVEAGNGDQVTLSGWYN 2632
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D + ++D+ ++ G + + +++VG+ +D ++G N
Sbjct: 269 GTDQDDRIFGTQSRTFVDIGADNHPLNGWVQNGIRYIGGAGNDTLVGTDYDDKLLGGDDN 328
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
++ SGND +G G D Y + + D++ + +D+
Sbjct: 329 DLLDGLSGNDYLEGGKGNDRLVGEDGFDTYVYTSGDGFDTILDSDGQGRILYNDI 383
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 59/208 (28%), Gaps = 16/208 (7%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-------KNYIDLNTESW 250
GN + S + G+D + V ID S
Sbjct: 2398 NNTLTGN---EAANILDGSTGADILIGGLGNDTYVVDNASDVVKETSTLSTEIDTVQSSV 2454
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S G I + G+S N+ +IGNS +NV G+D+ +G G DT
Sbjct: 2455 SYTLGSNVENLILTGAAAINGTGNSLNNQLIGNSGDNVLTGGKGSDLLNGDLGNDTLKGN 2514
Query: 311 APSYLYKIYRFENAII------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
A + + + +++ + D + F +
Sbjct: 2515 AGNDILQGGADNDSLSDTAGTNLLDGGSGADTLSGNAANEMFVGGTGNDTITTGNGADII 2574
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ D + V+ V G+
Sbjct: 2575 AFNRGDGMDVVNGGVGTDNTLSLGGGIQ 2602
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 11/134 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+P IY V + L + I G N T+ +++VG
Sbjct: 1850 SGTPDANAIYPIDITVTATDQFGASVSDTFTLTVNPINLIEGTTDNDTLLGTAAADALVG 1909
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SG+D++IG ++V + + ND G G D + + I N
Sbjct: 1910 LSGSDMLIGGEGDDVLYGGADNDYLSGGLGNDVYMFGLGDGQDAIE-----------NWT 1958
Query: 334 KQDFLSDVERLRFA 347
D +V+ LRF
Sbjct: 1959 GPDIAGNVDTLRFG 1972
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 33/92 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + T+ + + G GND +IG + N+ +G D+ G +G DT+
Sbjct: 806 DLDGSSGDDTLTGTNTTDRINGLGGNDTLIGGAGNDSLDGGAGADILMGGAGDDTYLNVT 865
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N + + AN L
Sbjct: 866 GEDTLADTEGHNTLQLAQANGLGAGGLKATHY 897
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 35/89 (39%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G++ N+ + GN A N+ S+G D+ G G DT+ S + K + I +
Sbjct: 2393 IGNALNNTLTGNEAANILDGSTGADILIGGLGNDTYVVDNASDVVKETSTLSTEIDTVQS 2452
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S+VE L + +
Sbjct: 2453 SVSYTLGSNVENLILTGAAAINGTGNSLN 2481
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D D+ V + + S + + + +++ G++ D + G
Sbjct: 771 DGFDPNDVFNSSSVSTFRFADGTELSINQLLARGFDLDGSSGDDTLTGTNTTDRINGLGG 830
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
N+ +GND DG +G D A Y E+ + + + Q
Sbjct: 831 NDTLIGGAGNDSLDGGAGADILMGGAGDDTYLNVTGEDTLADTEGHNTLQ 880
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 41/154 (26%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTESWS 251
+ + + +Y DSP I GG+D++ DL G ++ ++ +
Sbjct: 472 EANREDTLY-------DSPGNDHILSGGGNDIVTALRGGNDLIEAGAGQDKVNGGAGNDV 524
Query: 252 SIGGYEKNM--------------------TIAQHTVI-------ESVVGSSGNDVVIGNS 284
IGG + ++ IA E + G SG+D +IG
Sbjct: 525 IIGGADNDILAGGANDDRLYADAPISVADAIAAGNSQTGSGQKGEWLAGESGDDTLIGGV 584
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+V GND+ G +G D A
Sbjct: 585 GNDVLTGGGGNDLLIGGAGDDDISGDADYVATDF 618
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 2/142 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ G + ++ + ++ ++ G GND++ + + +GNDV G + D
Sbjct: 475 REDTLYDSPGNDHILSGGGNDIVTALRG--GNDLIEAGAGQDKVNGGAGNDVIIGGADND 532
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A + A + E L + +L
Sbjct: 533 ILAGGANDDRLYADAPISVADAIAAGNSQTGSGQKGEWLAGESGDDTLIGGVGNDVLTGG 592
Query: 366 ASYEDLIQVIGQDVFESMKHFY 387
+ LI G D +
Sbjct: 593 GGNDLLIGGAGDDDISGDADYV 614
Score = 44.3 bits (103), Expect = 0.071, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+GN+ + G ++ +G+D+ G+ G D + Y++ R A V++
Sbjct: 1248 GSAGNNPLSGTDYRDIILAGAGDDLLIGNGGNDDLHGETGTDTYRLSRGGGADQVFEVEG 1307
Query: 333 H 333
Sbjct: 1308 E 1308
>gi|268679624|ref|YP_003304055.1| hypothetical protein Sdel_0991 [Sulfurospirillum deleyianum DSM
6946]
gi|268617655|gb|ACZ12020.1| hypothetical protein Sdel_0991 [Sulfurospirillum deleyianum DSM
6946]
Length = 679
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 66/187 (35%), Gaps = 21/187 (11%)
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK---- 214
TS S DA +G ++ IYG G ++IY + +K
Sbjct: 154 NTSGWSSSDASKGNYDAIYGSNNDDILRGDSKTDAIYG---GGGKDDIYGGSLAEKLYGG 210
Query: 215 -------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
S TI + G+D LD GG L ++ G + T+
Sbjct: 211 EGDDFIDGSLGNDTIEGAEGNDTLD----GGDGTDTLLGGTGDDNLFGDAGDDTLNGGED 266
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G SG D ++G S N+ GND DG G DT Y Y N +
Sbjct: 267 NDTLNGGSGLDTLLGESGNDTLIGGGGNDTLDGGEGSDTLMGG---DDYDTYLAGNGDTI 323
Query: 328 YDANEHK 334
D++
Sbjct: 324 SDSDGSG 330
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 52/193 (26%), Gaps = 38/193 (19%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNM----------------------------TIAQHTV 267
G + NY+ NT WSS + N I ++
Sbjct: 144 DGSLYNYLFGNTSGWSSSDASKGNYDAIYGSNNDDILRGDSKTDAIYGGGGKDDIYGGSL 203
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
E + G G+D + G+ N+ + GND DG G DT F +A
Sbjct: 204 AEKLYGGEGDDFIDGSLGNDTIEGAEGNDTLDGGDGTDTLLGGTGDDNL----FGDAGDD 259
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D L+ + L + L G D +
Sbjct: 260 TLNGGEDNDTLNG------GSGLDTLLGESGNDTLIGGGGNDTLDGGEGSDTLMGGDDYD 313
Query: 388 EFGLSEGRDITFD 400
+ G I+
Sbjct: 314 TYLAGNGDTISDS 326
>gi|163748214|ref|ZP_02155513.1| hypothetical protein OIHEL45_19891 [Oceanibulbus indolifex HEL-45]
gi|161378513|gb|EDQ02983.1| hypothetical protein OIHEL45_19891 [Oceanibulbus indolifex HEL-45]
Length = 382
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 77/256 (30%), Gaps = 58/256 (22%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TEL-----NPNAQEVARWALGEWSKVVDLT 69
+ L D W + +T S + NP Q + R A W V+++
Sbjct: 3 YTLADYKWGFGEQGHSGGTVTWSFASPGAGSAFAGDISNPTYQALIRDAFQAWENVINID 62
Query: 70 FEETSIHS--DIKFI-SSNNGYVCTPRYDSRYF------------MEINFDKADVWRYG- 113
F E + + D++ S +G Y EI FD A+ W
Sbjct: 63 FVEVADGAQSDLRLGWDSIDGAYGVIGTAQSYLSKTSSTLYSVTEAEIRFDLAENWSTSK 122
Query: 114 --IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L ALHEIGH +GL+H + ++M + S
Sbjct: 123 TAPGGAVNLYTTALHEIGHTMGLLHTDDPD-------------------TIM--YPTLKS 161
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
D + DI Q +YGA + + I G D +
Sbjct: 162 QPDLTHH--------DIEGAQLMYGARLWGTAQD-----DLLVATNAADVINGQDGLDTV 208
Query: 232 DLTLIGGVKNYIDLNT 247
+ + D N
Sbjct: 209 RFEGALSLYSVTDDNA 224
Score = 41.3 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 1/108 (0%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVYDANEHKQDFL 338
+ G + +++ ++ DV +G GLDT + LY + I VY A L
Sbjct: 181 LWGTAQDDLLVATNAADVINGQDGLDTVRFEGALSLYSVTDDNALNIEVYAAATGLTQEL 240
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+VERL+F + + + + ++HF
Sbjct: 241 QNVERLQFDNGSLAFDTDGNAGTTYRLYQAAFDRAPDPEGLGFWIRHF 288
>gi|148683757|gb|EDL15704.1| matrix metallopeptidase 28 (epilysin), isoform CRA_a [Mus musculus]
Length = 470
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 50/168 (29%), Gaps = 26/168 (15%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ P + R A WS V L F E + +
Sbjct: 127 GNKWYKQHLSYRLVNWPERLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATGPA 179
Query: 78 DIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N+G E +FD + W +G L
Sbjct: 180 DIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRRGRNLFVVLA 239
Query: 126 HEIGHALGLMHPGSYNGGYPVY----GVDNDYENDSFLTSVMSYFMPQ 169
HEIGH LGL H + Y G D D L V S + Q
Sbjct: 240 HEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLA-VQSLYDGQ 286
>gi|301630699|ref|XP_002944454.1| PREDICTED: matrix metalloproteinase-18-like, partial [Xenopus
(Silurana) tropicalis]
Length = 301
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 64/197 (32%), Gaps = 49/197 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
+ W + Y+ T D+ A WS VV LTF SD
Sbjct: 65 NAVWKKKDLTYRILNYTPDMTRNDV-------DRAIEKAFKVWSDVVPLTFTRIYDRVSD 117
Query: 79 IKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNAL 125
I+ + + + + +D + +++FD+ + W G GT L A
Sbjct: 118 IEMLFAYRDHKDSLPFDGPSGILAHAFAPGDNIGGDVHFDEDEKWTSGSA-GTNLFLVAA 176
Query: 126 HEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H N YP Y Y P +
Sbjct: 177 HELGHSLGLDHSNDPNALMYPTYH----------------YINPNTFQLPQ--------- 211
Query: 185 VSDIVAVQKIYGAPKGS 201
DI + +YG +
Sbjct: 212 -DDINGIHSLYGTKENP 227
>gi|209527106|ref|ZP_03275620.1| Na-Ca exchanger/integrin-beta4 [Arthrospira maxima CS-328]
gi|209492446|gb|EDZ92787.1| Na-Ca exchanger/integrin-beta4 [Arthrospira maxima CS-328]
Length = 1152
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 61/172 (35%), Gaps = 8/172 (4%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
+ IY ++ + ++ + G+D L D TL GG N + + G
Sbjct: 75 DDTIYGLDGDDILGGNEGNDFLHGNQGNDTLYGGQGDDTLRGGKGNDVLFGDLGDDLLFG 134
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ + +++ G G+D++ G +++ F GND G G DT +
Sbjct: 135 DRDNDTLFGNQGNDTLYGGQGDDLLYGGQGDDLLFGDRGNDTLIGDQGSDTLTGGEGNNW 194
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + D + DF + + + D + + Y
Sbjct: 195 FYLGLNTGGFT-PDRSNFIMDFDINKDSIGLLDNLTFASLNIYQGAGIYATD 245
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 15/150 (10%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I+ GGDD + G + I E + G + N T+ +++ G GNDV
Sbjct: 67 DIIFALGGDDTI----YGLDGDDILGGNEGNDFLHGNQGNDTLYGGQGDDTLRGGKGNDV 122
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G+ +++ F ND G+ G DT + L + + D L
Sbjct: 123 LFGDLGDDLLFGDRDNDTLFGNQGNDTLYGGQGDDLL----YGGQGDDLLFGDRGNDTLI 178
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYE 369
DQ D++ + + Y
Sbjct: 179 G-------DQGSDTLTGGEGNNWFYLGLNT 201
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 48/145 (33%), Gaps = 15/145 (10%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D + +N I + T S + + I + + G+D + G +++
Sbjct: 27 DPISTATGIQAQNSITVLTNGQISSEPTDNSDFILGTEFDDIIFALGGDDTIYGLDGDDI 86
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRF 346
+ GND G+ G DT + + D L + L F
Sbjct: 87 LGGNEGNDFLHGNQGNDTLYGGQGDDTLR-------------GGKGNDVLFGDLGDDLLF 133
Query: 347 ADQCIDSVNVKQRSILEYTASYEDL 371
D+ D++ Q + Y +DL
Sbjct: 134 GDRDNDTLFGNQGNDTLYGGQGDDL 158
>gi|37524644|ref|NP_927988.1| hypothetical protein plu0643 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784069|emb|CAE12938.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 2123
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 9/178 (5%)
Query: 197 APKGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
A GS + I V K T+ G+D+L + G N I + S I
Sbjct: 620 AEGGSGNDTIISGSVNGVFIKGGSGNSTLIGGMGNDVL---VGGSGHNTI-VGGTGKSVI 675
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ TI + G+D + G ++V GN DG G++ +
Sbjct: 676 YAGPQGDTIYASKDGSIIHAGGGDDKIFGGVGDDVIEVGHGNATIDGDGGVNIVSLHGNH 735
Query: 314 YLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
Y+I R ++ +V D A L ++++L F+D + +E +++
Sbjct: 736 GDYQITRTDSGYVVADKVAGRDGTVTLKNIQKLNFSDISAVDLQTPNAMPVEDVLTHD 793
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 78/215 (36%), Gaps = 27/215 (12%)
Query: 157 SFLTSVMSY-----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+F S MS + + S + P+ + +++ +YG+ S ++ Y
Sbjct: 1337 TFKYSFMSTHDLGERSAGNWTLQVSDAHSGLPVTLNAWSLR-LYGSKSTS--DDTYFYTD 1393
Query: 212 QQKDSPFIQT---IYD------SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ S Q + D +GG + L+ + ++L T S G +TI
Sbjct: 1394 EYIQSVVGQANRAVLDDAVNGVAGGRNTLNAAAVS-RDTSVNLLTGVASIGGTA---LTI 1449
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ I+++V GND ++ +A+ + GN+ G +G D F + +
Sbjct: 1450 KNPSGIQNIVTGDGNDTLVAGNADALLDGGRGNNTLAGGAGKDFFVVHHREAGSDVISN- 1508
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++A + L FAD +
Sbjct: 1509 -----FEAARGEIIDLVGFRGKTFADLLLTQQGAD 1538
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 13/148 (8%)
Query: 196 GAPKG--SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+ G++++ I I+ +GG D ++G +++ S +
Sbjct: 567 GSNTYVGGAGDDVFVISASDDTKN----IHGNGGHDT--AIIVGNQGVELNMGQASLTIA 620
Query: 254 GGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N TI +V + G SGN +IG N+V SG++ G +G YA
Sbjct: 621 EGGSGNDTIISGSVNGVFIKGGSGNSTLIGGMGNDVLVGGSGHNTIVGGTG--KSVIYAG 678
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
IY ++ I++ D +
Sbjct: 679 PQGDTIYASKDGSIIHAG--GGDDKIFG 704
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 4/117 (3%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ ++ G SGND +I + +G++ + G +G D F A I+
Sbjct: 541 VSNLYGGSGNDTLIAAKTGSWLVGGAGSNTYVGGAGDDVFVISASDDTKNIHGNGGHDTA 600
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI----LEYTASYEDLIQVIGQDVF 380
+ L A+ + + S+ ++ + LI +G DV
Sbjct: 601 IIVGNQGVELNMGQASLTIAEGGSGNDTIISGSVNGVFIKGGSGNSTLIGGMGNDVL 657
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 61/160 (38%), Gaps = 8/160 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESW--SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
+D++ + LN E S++ G N T+ +VG +G++ +G +
Sbjct: 517 NDIITTAYASQSETDETLNAEQLGVSNLYGGSGNDTLIAAKTGSWLVGGAGSNTYVGGAG 576
Query: 286 NNVFFESSGNDV--FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---D 340
++VF S+ +D G+ G DT + ++ + ++ + + +S +
Sbjct: 577 DDVFVISASDDTKNIHGNGGHDTAIIVGNQGV-ELNMGQASLTIAEGGSGNDTIISGSVN 635
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ + +L + + ++ G+ V
Sbjct: 636 GVFIKGGSGNSTLIGGMGNDVLVGGSGHNTIVGGTGKSVI 675
>gi|296216053|ref|XP_002754399.1| PREDICTED: collagenase 3 [Callithrix jacchus]
Length = 471
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 58/193 (30%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 109 RTLKWSKTNLTYRIVNYTPDMTHSEV-------EKAFRKAFKVWSDVTPLNFTRLHDGTA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H + + +Y M+
Sbjct: 221 AHELGHSLGLDHSKDPGA---------------LMFPIYTYTGKSHFMLP---------- 255
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 256 DDDVQGIQFLYGP 268
>gi|281341728|gb|EFB17312.1| hypothetical protein PANDA_010999 [Ailuropoda melanoleuca]
Length = 224
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 61/188 (32%), Gaps = 46/188 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + + Y+ T + +L VA+ AL WS+ + L+F + +DI
Sbjct: 69 WVSSVVTYRIVSYTPDLPRVRVNQL------VAK-ALAMWSQEIPLSFRRVLAGTADIMI 121
Query: 82 ISSNNG------YVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + F + +FD+ + W G G A HE+
Sbjct: 122 SFARGAHGDYNPFDGPGNTLAHAFAPGPGLGGDAHFDEDEHWTDGSRTGVNFLITATHEL 181
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H N VM + DI
Sbjct: 182 GHSLGLGHSSDPNA-------------------VMYPAYRVGDPKNFKLA------PDDI 216
Query: 189 VAVQKIYG 196
++K+YG
Sbjct: 217 KGIRKLYG 224
>gi|301773284|ref|XP_002922058.1| PREDICTED: matrix metalloproteinase-20-like [Ailuropoda
melanoleuca]
gi|281341729|gb|EFB17313.1| hypothetical protein PANDA_011000 [Ailuropoda melanoleuca]
Length = 483
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 62/190 (32%), Gaps = 42/190 (22%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNG 87
++K + LT + + + AL WS V L F + +DI
Sbjct: 116 KWKKNTLTYRISKYTPSMTPAEVDKAVEMALQAWSSAVPLGFVRVNAGEADIMISFETGD 175
Query: 88 YVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + +D + +FD A+ W G+ G L A HE GHALGL
Sbjct: 176 HGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN-GFNLFTVAAHEFGHALGL 234
Query: 135 MHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H + YP Y N Y F D+ +Q
Sbjct: 235 AHSTDPSALMYPTYKYQNPYG----------------------FHLP----KDDVKGIQA 268
Query: 194 IYGAPKGSLG 203
+YG K LG
Sbjct: 269 LYGPRKPLLG 278
>gi|149699604|ref|XP_001494346.1| PREDICTED: similar to Matrix metalloproteinase-15 precursor
(MMP-15) (Membrane-type matrix metalloproteinase 2)
(MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix
metalloproteinase) (MT2-MMP) (MT2MMP) (SMCP-2) [Equus
caballus]
Length = 652
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 64/209 (30%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + WS++ + + T + E R A W + L F+E
Sbjct: 106 YALTGRKWSSHHLTFSIQNYTEKLGWYHSLE-------AVRRAFQVWEQATPLVFQEVPY 158
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 159 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 218
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + +M+ F
Sbjct: 219 STDLHGNSLFLVAVHELGHALGLEHSSNPSA-------------------IMAPFYQWMD 259
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D+ +Q++YG P G
Sbjct: 260 TDNFQ------LPEDDLRGIQQLYGTPDG 282
>gi|319638256|ref|ZP_07993019.1| type I secretion target repeat protein [Neisseria mucosa C102]
gi|317400529|gb|EFV81187.1| type I secretion target repeat protein [Neisseria mucosa C102]
Length = 408
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 97/292 (33%), Gaps = 44/292 (15%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH---PGS 139
+ G+ D N +++ G I + HE+GHALG H S
Sbjct: 45 FGSQGHGFFRIVDGSKGAFYNSKDGNIYLEQ-GSRHITARTISHEVGHALG-KHQAKAAS 102
Query: 140 YNGGYPVYGVDNDYENDSFLTS--VMSYFMPQDSMMDASFGYCATPMVS----------D 187
Y Y Y + + M + + + S G D
Sbjct: 103 YYNTAKAYAQARGYGEAEAIFNEARMVAYEERYNGRAYSTGISGNLYPYIKGKSFGEVKD 162
Query: 188 IVAVQKIYGAPKGSLGNNI----------YKIEVQQKDSPFIQTIYDSGGDDLL------ 231
++A Q +YG + +I Y + + S + + S L
Sbjct: 163 LIARQNMYGMYPSNGTGSIRMTYYETDIEYFLNTRTNFSKDFEEAFLSPNFKQLFVKHMA 222
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEK--------NMTIAQHTVIESVVGSSGNDVVIGN 283
+ G N + S+S + + + G++ ND+++G
Sbjct: 223 NYDTFGNKGNNKIVADGSYSRDSLLIGRSKTYLKSGAYMYGDAGDDVLKGTNQNDILLGG 282
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
S N+V +GND+ G+SG D F Y YR +N+ I+ D++ +
Sbjct: 283 SGNDVLIGGNGNDILVGNSGRDKLFGGKG---YDKYRADNSDIIRDSDGKGE 331
>gi|291237326|ref|XP_002738586.1| PREDICTED: matrix metalloproteinase 24 preproprotein-like
[Saccoglossus kowalevskii]
Length = 525
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 54/177 (30%), Gaps = 35/177 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS-DIKF 81
W + YK T D +E R A W V LTF E + DI
Sbjct: 110 WEKNDLTYKILNYTPDLAEADTSE-------TIRLAFDIWQAVTPLTFTEIYDGTPDINI 162
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + + P + +FD + + GT L A H
Sbjct: 163 LFARGYHGDGGPFDGPGGTLAHAYFP--GGGLGGDAHFDDDETFTIRTYDGTNLLQVAAH 220
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
E GH+LGL H Y Y Y D Y +P+D Y + P
Sbjct: 221 EFGHSLGLGHSSVYGALMAPYYQG--YAPD--------YVLPEDDKRGIQALYGSAP 267
>gi|325197798|gb|ADY93254.1| Iron-regulated protein frpC [Neisseria meningitidis G2136]
Length = 1210
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 534 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 591
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 592 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 647
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 648 VLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 707
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 708 IIRFTDGITAD 718
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 734 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 791
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ + N + G E N + + +
Sbjct: 792 GNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT----LDGGEGNDALYGYNGND 847
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ GND + G N+ +GND +G SG DT+ + +Y ++ A D
Sbjct: 848 VLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKD 907
Query: 330 ANEHKQDFLSD 340
+D
Sbjct: 908 IIRFTDGITAD 918
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++DS +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 934 KDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 991
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 992 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 1029
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 1030 TLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 1087
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 1088 GKGFGQDTVYN 1098
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 41/123 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y +A+ +
Sbjct: 994 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGE 1053
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 1054 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 1113
Query: 390 GLS 392
+
Sbjct: 1114 KAA 1116
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 441 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 500
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 501 YATGRKDIIRFTDGITAD 518
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 594 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGAE 653
Query: 330 ANE-----HKQDFLSD------VERLRFADQCIDSVNVKQRSILEY 364
N+ D L +E +D + Q ++ Y
Sbjct: 654 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 699
>gi|149202356|ref|ZP_01879329.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
gi|149144454|gb|EDM32485.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
Length = 1844
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIY-DSGGDDLLDLTLIGG-----VKNYIDLNTES 249
G + G ++Y + + D F + + G+DL+D +G + + +L +
Sbjct: 151 GTAAPTNGTDVYGMTADRYDLTFSDYVVEGTAGNDLIDAAYLGDPEGDRIDDTDNLAGTN 210
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ N T+ ++V GS GND++ G + N+ +GND G +G DTF
Sbjct: 211 ADLVTAGLGNDTVRAGAGNDTVFGSDGNDLLDGGTGNDSLDGGNGNDTLIGGAGADTFIG 270
Query: 310 YAPSYLYKIYRFENAI 325
L A+
Sbjct: 271 GTGLDLLSYATSGAAV 286
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 74/247 (29%), Gaps = 14/247 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GGD D+ + G +D S + T + G +GND + G
Sbjct: 296 TGGDATGDVIISG-----VDGIIGSAFDDTLVGYDDIFDGGTTTNVIDGGAGNDSIDGRD 350
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ SG+D G G DT +Y + + + A + + D +D +
Sbjct: 351 GADSLLGGSGDDTILGGGGNDTIYYGSGNDSVE----GGAGNDFIDDALGFDSTADASTV 406
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDITFDSY 402
D IL A + + G D+ + + G +T
Sbjct: 407 SGGDGNDTIFGSSAGDILSGDAGNDSIGGESGNDLIDGGAGSDTIQGGAGNDTILTSGGN 466
Query: 403 LYLGS--YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
L D+ +D + G G + D IA + + ++
Sbjct: 467 DSLQGGDGADVIRATATDPSGVYS-FNVDGGFGGVDNDTLDLSALIADGWTISSMTQNSE 525
Query: 461 DLVQVGK 467
+ G
Sbjct: 526 NNGSPGF 532
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 78/231 (33%), Gaps = 22/231 (9%)
Query: 156 DSFLTSVMSYFMPQDSMMDASF-------GYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D + S M+ + S AT +DI + +G+ G ++
Sbjct: 513 DGWTISSMTQNSENNGSPGFSGQIFLSRGAQSATINYTDIENILLSDFIVEGTAGGDLID 572
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTV 267
+ + D +D T N ++ + I N T+
Sbjct: 573 LNYTGDPNG-----------DRVDNTDAADGSNDDEIVAGAGDDTILAGSGNDTVLGEDG 621
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ ++G++G+D ++G + N+ +G D DG +G +T Y + + N
Sbjct: 622 ADLILGAAGDDSLLGGANNDTIAGGTGADTLDGGTGSNTLDYSGSAGSVTVNLETNTAFG 681
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
DA+ D +S+ + + ++ + + + L G D
Sbjct: 682 SDADG---DVISNFQNVIGSNFGDTITLSNTSGTILAGSGNDGLAGGSGDD 729
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 9/150 (6%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSS----IGGYEKNMTIAQHTVIESVVGSSGNDV 279
D+G +D T G +D N + S I N TI ++V G G+D
Sbjct: 1315 DAGDLITVDYTGDPGGD-RVDANDAADGSQDDEIIAGAGNDTIDAGAGNDTVYGGIGDDS 1373
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE----HKQ 335
+ G S N+ GND G G D + A + + + +
Sbjct: 1374 IAGGSGNDTLLGEDGNDTITGGFGQDVVYGGAGDDVLSVAISGVGDPQHLNDTLYGEDGN 1433
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D L ++ D + + S +
Sbjct: 1434 DQLFGSNNSQYLDGGDGNDTISGDSGINGG 1463
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 11/127 (8%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW------SSIGGYEKNMTIAQHTVI 268
TI GG+D + + ++ GG N + + S++ G + N TI +
Sbjct: 362 DTILGGGGNDTIYYGSGNDSVEGGAGNDFIDDALGFDSTADASTVSGGDGNDTIFGSSAG 421
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GND + G S N++ +G+D G +G DT + + + I
Sbjct: 422 DILSGDAGNDSIGGESGNDLIDGGAGSDTIQGGAGNDTILTSGGNDSLQGGDGADVIRAT 481
Query: 329 DANEHKQ 335
+
Sbjct: 482 ATDPSGV 488
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 18/150 (12%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGG--DDLLD-----------LTLIGGVKNYI---- 243
L + +Y + + + Y GG +D + + I
Sbjct: 1422 HLNDTLYGEDGNDQLFGSNNSQYLDGGDGNDTISGDSGINGGWESASGSSETDTLIGGAG 1481
Query: 244 -DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
DL ++ E ++ ++++G + ND + G + ++ +GND G +
Sbjct: 1482 NDLIYSGFTGSATLETGDSLVGGDGNDTLIGGTANDTIEGGNDSDSILAGAGNDRIFGDA 1541
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G D+ A + + I V +
Sbjct: 1542 GNDSLDGGADADTLFGGTGNDTINVSQGDS 1571
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 66/199 (33%), Gaps = 16/199 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+G GN+ + + T+ G+D + + G + + G
Sbjct: 383 EGGAGNDFIDDALGFDSTADASTVSGGDGNDTIFGSSAGDI-------------LSGDAG 429
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA--PSYLY 316
N +I + + + G +G+D + G + N+ S GND G G D A PS +Y
Sbjct: 430 NDSIGGESGNDLIDGGAGSDTIQGGAGNDTILTSGGNDSLQGGDGADVIRATATDPSGVY 489
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
V + ++D + Q ++ S + + +
Sbjct: 490 SFNVDGGFGGVDNDTLDLSALIADGWTISSMTQNSENNGSPGFSGQIFLSRGAQSATINY 549
Query: 377 QDVFE-SMKHFYEFGLSEG 394
D+ + F G + G
Sbjct: 550 TDIENILLSDFIVEGTAGG 568
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 24/170 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI- 268
T+ G + LD + G ++ + A VI
Sbjct: 640 NDTIAGGTGADTLDGGTGSNTLDYSGSAGSVTV---------NLETNTAFGSDADGDVIS 690
Query: 269 --ESVVGSSGNDVVI---------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++V+GS+ D + S N+ SG+D G G DT A + +
Sbjct: 691 NFQNVIGSNFGDTITLSNTSGTILAGSGNDGLAGGSGDDTIFGQDGADTILAGAGNDVIV 750
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
++ I++ D ++ F D + + +++ +L Y
Sbjct: 751 AGAGDDEIVLDDTLQNDTIFGGDTNEVL---GDLINLSSISDGLLVYYFG 797
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 4/141 (2%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ ++ ++ D DL++L+ I +G +
Sbjct: 1059 AGAGDDEIVLDDTLQNDTIFGGDTDEVLGDLINLSSISDGLLVYYFGEG----VGSIADD 1114
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++ + + IE ++ +G+D V+G+ +SGND+ G DT F +
Sbjct: 1115 VSMTEFSGIERLLMGTGDDTVVGSDGVEQIIGNSGNDLIFAGGGNDTIFSGFDNDFVDGG 1174
Query: 320 RFENAIIVYDANEHKQDFLSD 340
+++I+ + +
Sbjct: 1175 AGDDSILAASGADTIVGGAGN 1195
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 22/167 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-------DLTLIGGVKN----- 241
G GS + I+ + I GDD + + T+ GG N
Sbjct: 721 GLAGGSGDDTIFGQDGADTILAGAGNDVIVAGAGDDEIVLDDTLQNDTIFGGDTNEVLGD 780
Query: 242 YIDLNTESWS--------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
I+L++ S +G ++++ + + IE ++ +G+D V+G+ +S
Sbjct: 781 LINLSSISDGLLVYYFGEGVGSIADDVSMTEFSGIERLLMGTGDDTVVGSDGVEQIIGNS 840
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND+ G DT F + +++I+ + +
Sbjct: 841 GNDLIFAGGGNDTIFSGFDNDFVDGGAGDDSILAASGADTIVGGAGN 887
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 44/149 (29%), Gaps = 7/149 (4%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-----NNVFFE 291
V N L + T A + G G D V N A ++
Sbjct: 1290 SSVDNTPALVAMGIPDGRDFIVEGTDAGDLITVDYTGDPGGDRVDANDAADGSQDDEIIA 1349
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+GND D +G DT + + ++ D N+ + + +
Sbjct: 1350 GAGNDTIDAGAGNDTVYGGIGDDSIAGGSGNDTLLGEDGNDTITG--GFGQDVVYGGAGD 1407
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D ++V + + + L G D
Sbjct: 1408 DVLSVAISGVGDPQHLNDTLYGEDGNDQL 1436
Score = 41.3 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 22/59 (37%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S +D +I + N+ +GNDV +G D I+ + ++ D
Sbjct: 1030 AADGSQDDEIIAGAGNDTIDAGAGNDVIVAGAGDDEIVLDDTLQNDTIFGGDTDEVLGD 1088
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-----NNVFFE 291
V N L + T A + G G D V N A ++
Sbjct: 982 SDVDNTPALVAMGIPDGRDFIVEGTDAGDLITVDYTGDPGGDRVDANDAADGSQDDEIIA 1041
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND D +G D A + ++ +
Sbjct: 1042 GAGNDTIDAGAGNDVIVAGAGDDEIVLDDTLQNDTIFGGDTD 1083
>gi|260557565|ref|ZP_05829780.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
19606]
gi|260409191|gb|EEX02494.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
19606]
Length = 2890
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 11/150 (7%)
Query: 244 DLNTESWSSIGGYE---KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
D+ +S S + +N TI + +++ G+SGND + G + N++ + +GND +G
Sbjct: 2439 DIANQSVSDVFKLIFVVQNQTINGTSNADTLYGASGNDTLTGQAGNDILYGQAGNDTLNG 2498
Query: 301 SSGLDTFFYYAPSYLYKIYRFE-------NAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+G DT + Y + N + L++VE L +
Sbjct: 2499 GTGNDTMYGGKGDDTYIVDSTADVISESVNEGTDIVQSSVTYTLLNNVENLTLTGTTAIN 2558
Query: 354 VNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+++ ++ L +G D
Sbjct: 2559 GTGNALNNVIVGNSAINTLTGGVGDDYLNG 2588
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 6/124 (4%)
Query: 222 IYDSG-GDD-----LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ DSG G+D + L+GG N E + N I T + ++G S
Sbjct: 1374 VIDSGEGNDQLIGGTGNDRLLGGEGNDQLQGGEGDDYLEASNGNDFIEGGTGNDQLIGGS 1433
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G D + GN ++ + GND+ G G + Y ++ D +
Sbjct: 1434 GEDSLYGNDGDDHLYGGDGNDILSGGQGNNILEGGNGEDEYVFDILGYNNVINDTDASVL 1493
Query: 336 DFLS 339
FLS
Sbjct: 1494 RFLS 1497
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 65/197 (32%), Gaps = 13/197 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ Q S TIY G+D++ + G + W + G +N I
Sbjct: 1298 GGDDQISGSDIGDTIYGGTGNDIIK--GLEGSDQLFGDEGDDW--LDGSYENDFIYGGEG 1353
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G G D + G + ++V GND G +G D + + ++ +
Sbjct: 1354 NDQLFGGDGEDQLEGGNGDDVIDSGEGNDQLIGGTGNDRLLGGEGNDQLQGGEGDDYLEA 1413
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ N+ + + + + + + N L + L G +
Sbjct: 1414 SNGNDFIEGGTGNDQLIGGSGEDSLYGNDGDDH-LYGGDGNDILSGGQGNN-------IL 1465
Query: 388 EFGLSEGRDITFDSYLY 404
E G E + FD Y
Sbjct: 1466 EGGNGED-EYVFDILGY 1481
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 22/155 (14%)
Query: 193 KIYGAPK-----GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
IYG + +Y + IY GDD L V + I+
Sbjct: 991 YIYGDSNQIDIQYHNNDTLYGDAGNDNIRGDGGSDIIYGGDGDDFL-------VADVINN 1043
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ + + +S+ G GND + G + +++ F G+D F + G D
Sbjct: 1044 RA--------FDGDDQLYGGNGKDSLSGFDGNDTLDGGAGDDIIFGGKGDDYFISNEGND 1095
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ +Y I ++ + V D++ +L
Sbjct: 1096 QLSGGEGNDIYHIQVRDSEVKVLDSSGENHYYLKG 1130
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Query: 234 TLIGGVKNYIDLNTESWS-------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
+ + + IDL + S SI + + +I +++ G S +D + G N
Sbjct: 305 SSLNLNEQLIDLINLAKSLLTQKGISIVSGDGDDSITGTKYSDALYGGSDDDSLNGAEDN 364
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ GND+ DG G D + Y +YD + + Q + D+
Sbjct: 365 DYLNGGVGNDILDGGEGDDNLVDEKGNDTYIFNGNFGKDSIYDLDGNGQIKIDDI 419
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 15/136 (11%)
Query: 227 GDDL--LDLTLIGGVKNYIDLNTESWSSI----GGYEKNMTIAQHTVIESVVGSSGNDVV 280
G+D +D T +N + SSI +N+T+ T I + G++ N+ +
Sbjct: 2690 GNDTYVIDNTGDIVTENAGEGIDTVLSSITYTLSSNLENLTLTGSTAI-NATGNTLNNTL 2748
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL--------YKIYRFENAIIVYDANE 332
GNS N +GND+ DG G D + D
Sbjct: 2749 TGNSGVNALNGGAGNDILDGQGGNDQLTGGTGIDTALYQLLVQSDALGGNGTDVWSDFTI 2808
Query: 333 HKQDFLSDVERLRFAD 348
++ +++ D
Sbjct: 2809 GNTTSNTNADKIDIGD 2824
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 2/133 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++G +N+T+ T I + G++ N+V++GNSA N G+D DG +G D
Sbjct: 2631 TLGNNLENLTLIGSTAI-NGTGNALNNVLVGNSAINTLTAGVGDDYLDGGAGADKLLGGI 2689
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ Y I + I+ +A E LS + ++ ++ L
Sbjct: 2690 GNDTYVIDNTGD-IVTENAGEGIDTVLSSITYTLSSNLENLTLTGSTAINATGNTLNNTL 2748
Query: 372 IQVIGQDVFESMK 384
G +
Sbjct: 2749 TGNSGVNALNGGA 2761
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 20/156 (12%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
Y + TI+ GG D++ D I G N ID+ + ++ G N I
Sbjct: 959 YHKDDLLYGGEGNDTIFGDGGRDIIYGGKDNDYIYGDSNQIDIQYHNNDTLYGDAGNDNI 1018
Query: 263 AQHTVIESVVGSSGNDVV----------------IGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G G+D + G + + GND DG +G D
Sbjct: 1019 RGDGGSDIIYGGDGDDFLVADVINNRAFDGDDQLYGGNGKDSLSGFDGNDTLDGGAGDDI 1078
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
F + + + + N+ + D E
Sbjct: 1079 IFGGKGDDYFISNEGNDQLSGGEGNDIYHIQVRDSE 1114
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 54/163 (33%), Gaps = 8/163 (4%)
Query: 200 GSLGNNIYKIEVQQKDSP--FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+G+ IY ++ GDD LD + ++I + + G +
Sbjct: 1306 SDIGDTIYGGTGNDIIKGLEGSDQLFGDEGDDWLDGSY---ENDFIYGGEGNDQ-LFGGD 1361
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + + GND +IG + N+ GND G G D + A +
Sbjct: 1362 GEDQLEGGNGDDVIDSGEGNDQLIGGTGNDRLLGGEGNDQLQGGEGDD--YLEASNGNDF 1419
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
I + + + +D + + D ++ Q +
Sbjct: 1420 IEGGTGNDQLIGGSGEDSLYGNDGDDHLYGGDGNDILSGGQGN 1462
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 59/194 (30%), Gaps = 29/194 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIG-----------------NSANNVFFESSGN 295
+ G N I + + G +GND++ G N N+ + GN
Sbjct: 833 LYGGNGNDQIVGDGGKDIIQGGNGNDLIFGDNSELDGKYHAEDNIEGNDGNDEIWGQGGN 892
Query: 296 DVFDGSSGLDTFFYYAPSYLYKI----YRFENAIIVYDANEHKQDFLSD--VERLRFADQ 349
D +G G D + + E D + E D+
Sbjct: 893 DTINGGDGEDRISGDGINIDVQYHGDDTVSGGNGNDLIWGEGGSDTIYGGEGEDYIEGDE 952
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGRDITF---DSYLY 404
+ + +L + + G+D+ + +G S DI + D+
Sbjct: 953 TSIHIQYHKDDLLYGGEGNDTIFGDGGRDIIYGGKDNDYI-YGDSNQIDIQYHNNDTLYG 1011
Query: 405 LGSYDDLRNVFGSD 418
D++R GSD
Sbjct: 1012 DAGNDNIRGDGGSD 1025
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 3/121 (2%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N I + + + G+ G+D + G + + D+ G G D
Sbjct: 681 YGGIGNDIILGSSDTDFLYGAVGDDAIYGMDGKDYLYGGENKDILYGGDGADQIIGGQGD 740
Query: 314 YLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + D ++ Q D ++ L A + L Y + +D I
Sbjct: 741 DELTGGLEGDELYGGDGDDIIQADLNDSIDTL--APPVEPKTYSRFGHDLVYGGAGKDQI 798
Query: 373 Q 373
Sbjct: 799 W 799
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 10/145 (6%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+Q +YG GN+ K + GDD ++ Y + +
Sbjct: 1930 IQFLYGGD----GNDTLKAGDGGAYLDGGAGTDHLVGGSGDDTF---IVDEQDTYEENDP 1982
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+N+ ++ + + S N + GN+++N ++GN+ DG +G D
Sbjct: 1983 NGGYDTIHISQNIDLSLGYLEAVTLLGSQNLSIYGNTSDNKLIGNAGNNYIDGRAGSDYM 2042
Query: 308 FYYAPSYLYKIYRFENAIIVYDANE 332
+ Y + E + N
Sbjct: 2043 QGGLGNDYYVVDTTETIETDENGNT 2067
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 41/138 (29%), Gaps = 1/138 (0%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG+ N I L + + G + I + + G D++ G + G+
Sbjct: 681 YGGIGNDIILGSSDTDFLYGAVGDDAIYGMDGKDYLYGGENKDILYGGDGADQIIGGQGD 740
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G D + + + ++I + + L + D +
Sbjct: 741 DELTGGLEGDELYGGDGDDIIQ-ADLNDSIDTLAPPVEPKTYSRFGHDLVYGGAGKDQIW 799
Query: 356 VKQRSILEYTASYEDLIQ 373
S Y +D I
Sbjct: 800 GNLGSDEIYGDDDDDQIA 817
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 8/122 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G GND+++G+S + + + G+D G G D + + + II
Sbjct: 678 DIAYGGIGNDIILGSSDTDFLYGAVGDDAIYGMDGKDYLYGGENKDILYGGDGADQIIGG 737
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
++ L E I ++ S + L + + H
Sbjct: 738 QGDDELTGGLEGDELYGGDGDDIIQADLND--------SIDTLAPPVEPKTYSRFGHDLV 789
Query: 389 FG 390
+G
Sbjct: 790 YG 791
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 45/112 (40%), Gaps = 11/112 (9%)
Query: 231 LDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND---------VV 280
++ G N I + +++ + + I + ++ + G +GND +
Sbjct: 1552 INFLHNGSDGNDIIVGNPYFNNTVYSKNGDDAIYGGSGVDYIYGGNGNDAIVDPGNIGFL 1611
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G ++ ++ N F G G D++ + F+ +I +++A++
Sbjct: 1612 YGGEGDDNLIGNN-NSEFYGGEGYDSYQVNGRNTKIFDSDFKGSIYIHNASD 1662
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 4/135 (2%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
ES + GY + + ++GSS D + G ++ + G D G D
Sbjct: 666 ESLNYGHGYAGSDIAYGGIGNDIILGSSDTDFLYGAVGDDAIYGMDGKDYLYGGENKDIL 725
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSILEYT 365
+ + I + + E + + D + + AD ID++
Sbjct: 726 YGGDGADQ--IIGGQGDDELTGGLEGDELYGGDGDDIIQADLNDSIDTLAPPVEPKTYSR 783
Query: 366 ASYEDLIQVIGQDVF 380
++ + G+D
Sbjct: 784 FGHDLVYGGAGKDQI 798
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 273 GSSGNDVVIGNS-ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
GS GND+++GN NN + +G+D G SG+D + Y + I N +Y
Sbjct: 1558 GSDGNDIIVGNPYFNNTVYSKNGDDAIYGGSGVD--YIYGGNGNDAIVDPGNIGFLY-GG 1614
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
E + + + + + DS V R+ + +
Sbjct: 1615 EGDDNLIGNNNSEFYGGEGYDSYQVNGRNTKIFDSD 1650
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 11/117 (9%)
Query: 226 GGDDLLDLTLIG-GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG D L+ + + N S E N IE+++ GN
Sbjct: 2081 GGIDTLERWEDARFISQDENGNPVLTDSYKILENN--------IENLILKGNAKTGFGND 2132
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFY--YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+N+ + ++ DG +G DT+ + + Y +A+ + + + +S
Sbjct: 2133 LDNIIVGNEQDNYIDGLAGNDTYIFSRGGGTDTYSFEDNIDAVNILKIQGYSANDVS 2189
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 56/168 (33%), Gaps = 22/168 (13%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT-VIESVVGSSGNDVVIGNS 284
GG D+ G + I+ S G ++ I I+ + G +GNDV+
Sbjct: 1807 GGTGSGDIIYAGNGNDQINSGLGSSQVYAGEGDDVIITPDVFAIDKISGGAGNDVIYTYD 1866
Query: 285 --ANNVFFES-------SGN-----DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+NN S + N DV G G D + Y N IIV +
Sbjct: 1867 PLSNNQISNSPYLNINLARNIYDIKDVVYGGEGDD-YIYLGNQKTEAYGDDGNDIIVSYS 1925
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
S+++ L D + L+ A + L+ G D
Sbjct: 1926 LS------SNIQFLYGGDGNDTLKAGDGGAYLDGGAGTDHLVGGSGDD 1967
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 47/174 (27%), Gaps = 15/174 (8%)
Query: 245 LNTESWSSIGGYEKNMTI-AQHTVIESVVGS-------SGNDVVIGNSANNVFFESSGND 296
LN + + +I A + +++ SGND + + + V GND
Sbjct: 479 LNFGDLENNSTPPSDTSIYAFGSEGNNIIFGERYVASFSGNDFIHATNEDAVIIAGDGND 538
Query: 297 VFDGSSGLDTFFYY-APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ G D + S F D + RL + +
Sbjct: 539 LISTGDGNDVIYAGVVTSDQDSNIVFSGGGRDQVYGGVGNDIIMTSSRLNAVKDSLLNQM 598
Query: 356 VKQRSILEYTAS---YEDLIQVIGQDVFESMKHFYEFG---LSEGRDITFDSYL 403
+ L + I H+ ++E +F+ Y
Sbjct: 599 GDADTGLTDLDKEYNILNFNFEINLGDNNRFSHYTNNSIGQITEQILPSFNIYY 652
>gi|261244992|ref|NP_001159651.1| collagenase 3 [Ovis aries]
gi|256665393|gb|ACV04842.1| matrix metallopeptidase 13 [Ovis aries]
Length = 471
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 66/187 (35%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F + +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDLTHSEV-------EKAFRKAFKVWSDVTPLNFTRIHNGTA 161
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGD--EDPNSKHP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|260784980|ref|XP_002587541.1| hypothetical protein BRAFLDRAFT_230518 [Branchiostoma floridae]
gi|229272690|gb|EEN43552.1| hypothetical protein BRAFLDRAFT_230518 [Branchiostoma floridae]
Length = 442
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 66/195 (33%), Gaps = 48/195 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L+ + W+ + Y + D+ + + A+ W++V LTFEE
Sbjct: 67 YTLQGEKWTKTHLTYYIVNNASSLPYEDV-------KAILNRAVQVWAEVSPLTFEEKRD 119
Query: 76 H-SDIKFISS--------NNGYVCTPRYDSRYFMEI----NFDKADVWRYGIGKGTILSH 122
+D+ + N + F +FD + W G L
Sbjct: 120 GWADLYIYFARGEHTDGPENAFDGPGGILGHAFFPTSGHAHFDDEEKWTNEGKDGKNLFM 179
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYCA 181
A HE GH LGL H S+MS Y+ + D Y
Sbjct: 180 VAAHEFGHTLGLAHSNVEE-------------------SLMSPYYQDYKT--DFKMPY-- 216
Query: 182 TPMVSDIVAVQKIYG 196
D++A+Q++YG
Sbjct: 217 ----DDVMAIQQLYG 227
>gi|148241798|ref|YP_001226955.1| hypothetical protein SynRCC307_0699 [Synechococcus sp. RCC307]
gi|147850108|emb|CAK27602.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 345
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 12/144 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N I + + G G D + G S +V GND +G SG DT + +
Sbjct: 120 SLAGEIGNDKIKGGNGNDRLSGGRGIDSLYGGSGQDVVNGGVGNDSINGGSGRDTAVFSS 179
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
R + +D L +E + + + L + L
Sbjct: 180 RKN-----RINLKTTKWQNTGDGRDRLISIENVNAGSGNDVVTGNRSANTLNGQNGNDVL 234
Query: 372 IQVIGQDVFESMKHFYEFGLSEGR 395
G D + G R
Sbjct: 235 NGAAGND-------YLLGGRGNDR 251
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 5/179 (2%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWS--SIG 254
G G + ++ T + G D L + D+ T + S ++
Sbjct: 167 NGGSGRDTAVFSSRKNRINLKTTKWQNTGDGRDRLISIENVNAGSGNDVVTGNRSANTLN 226
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + ++G GND + G S N+ GND G SG DTF S
Sbjct: 227 GQNGNDVLNGAAGNDYLLGGRGNDRLKGGSGNDKLVGGQGNDKLWGGSGRDTFVLSEGSG 286
Query: 315 LYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+I F N + + + F + D + V + + L+
Sbjct: 287 YDRIMDFRNGQDRIQMGSGVDNLKIQNRNGHAFVYEGRDLMAVVNGAAGDLQERGNFLV 345
>gi|156405090|ref|XP_001640565.1| predicted protein [Nematostella vectensis]
gi|156227700|gb|EDO48502.1| predicted protein [Nematostella vectensis]
Length = 511
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 60/183 (32%), Gaps = 44/183 (24%)
Query: 54 VARWALGEWSKVVDLTFEET-----SIHSDIKFISSNNG-------------YVCTPRYD 95
R AL W+ V LTF E + I+F++ ++G + P +
Sbjct: 134 AIRNALAMWAAVTPLTFIEVYDPRIEVEIRIRFVTGDHGDGYPFDGPGGTLAHAFYPHDN 193
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ + +FD + + G L A+HE GH+LGL H + +
Sbjct: 194 TGLSGDAHFDDEEYFTLRTDHGIDLFWVAVHEFGHSLGLDHSSNVDA------------- 240
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+M Y + + D Y D VQ IYG + +
Sbjct: 241 ------IM-YPFYRGYVPDFQLHY------DDKAGVQAIYGTKTSITAKTVEPVTPTIHV 287
Query: 216 SPF 218
P
Sbjct: 288 DPT 290
>gi|150513|gb|AAA25543.1| leukotoxin membrane protein (LktA) [Mannheimia haemolytica]
Length = 953
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIYGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D G+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIYGNDGNDRLFGGKGDD---ILDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSN 812
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 6/108 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIYGNDGNDRLFGGKGDDILDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE 322
+D + G N++ G+D+F G D +
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSN 812
>gi|158334728|ref|YP_001515900.1| cadherin domain/calx-beta domain-containing protein [Acaryochloris
marina MBIC11017]
gi|158304969|gb|ABW26586.1| cadherin domain/calx-beta domain protein [Acaryochloris marina
MBIC11017]
Length = 1483
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 49/134 (36%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N I + +++ G SG+D ++G + F G+D G +G D
Sbjct: 1337 GGDDHLFGRGGNDHIQGNAGKDTLKGGSGDDELLGGHGRDYLFGGDGHDRLRGGNGKDLL 1396
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A S + + E + D + + E L F D + SV + T
Sbjct: 1397 VGGAGSDTFVLEPGEERDYILDFDVAVDKVILMAEHLSFNDLRVTSVGHSSAVSVASTGD 1456
Query: 368 YEDLIQVIGQDVFE 381
+ +G D+ +
Sbjct: 1457 HLAFFAGVGADLLK 1470
>gi|332208024|ref|XP_003253096.1| PREDICTED: interstitial collagenase isoform 1 [Nomascus leucogenys]
Length = 470
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 57/194 (29%), Gaps = 49/194 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 109 RWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFKLWSNVTPLTFTKVSEGQADIM 161
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A HE
Sbjct: 162 ISFVRGDHQDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLYRVAAHE 220
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M +F D
Sbjct: 221 LGHSLGLSHSTDIGA-------------------LM--------YPSYTFSGDVQLAQDD 253
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG +
Sbjct: 254 IDGIQAIYGRSQNP 267
>gi|224043570|ref|XP_002198005.1| PREDICTED: matrix metalloproteinase-13 [Taeniopygia guttata]
Length = 485
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 60/195 (30%), Gaps = 47/195 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-- 79
WS + Y+ T+ ++ + A WS V L F S +DI
Sbjct: 114 WSKMNLTYRIMNYTSDLKRNEV-------DRAFKKAFKVWSDVTPLNFTRIRSGIADIMI 166
Query: 80 KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F + +G P Y + +FD +VW KG L A HE
Sbjct: 167 SFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDEVWSDD-SKGYNLFLVAAHEF 225
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H +M P + S D+
Sbjct: 226 GHSLGLEHSRDPGA-------------------LM---FPIYTYTGKSGFVLP---DDDV 260
Query: 189 VAVQKIYGAPKGSLG 203
+Q++YG G
Sbjct: 261 QGIQELYGFSVSISG 275
>gi|116252708|ref|YP_768546.1| cation-binding protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257356|emb|CAK08451.1| putative calcium-binding cadherin-like RTX protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 929
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 55/134 (41%), Gaps = 3/134 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G+D G N+ F +GNDV G +G+DT + Y + I+ A
Sbjct: 630 VKTGGGHDYFFGTGGNDRFEGGAGNDVLLGGAGIDTAVFSGNFAKYTFALNNGSHILTSA 689
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+D L+DVE RFAD D K + + S IQ+ + ES + G
Sbjct: 690 L-EGKDTLTDVEFARFADGVYDFAKGKFTP--DGSNSAPTNIQLSKTSLLESTPIWTTVG 746
Query: 391 LSEGRDITFDSYLY 404
L +D D+ Y
Sbjct: 747 LLSAKDADGDTLTY 760
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 52/171 (30%), Gaps = 6/171 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ + S T+ DS DL D + ++I N TI
Sbjct: 24 DVIRNSAANPLSAVALTVSDSSVADLADELGSVSASVR---GSSGPNTITTGAGNDTIVS 80
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G +GND++ G + N+ GND G G D A + + +
Sbjct: 81 GGGADTLSGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVGNDVLKGGAGNDTISDGDY-FS 139
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ N D V + F T DL +
Sbjct: 140 DVAETFNIDAGDGNDKV--ILFTGSFAKISGTIDGGAGTDTLQANDLTGLT 188
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 20/202 (9%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ L + + + + S TI G+D + ++ ++ G
Sbjct: 44 SSVADLADELGSVSASVRGSSGPNTITTGAGNDTI-------------VSGGGADTLSGG 90
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG----LDTFFYYAP 312
N + +++ G GND + G N+V +GND +TF A
Sbjct: 91 AGNDLLNGEAGNDTLNGGDGNDEIYGGVGNDVLKGGAGNDTISDGDYFSDVAETFNIDAG 150
Query: 313 SYLYKIYRFENAIIVYDA---NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
K+ F + D L + + ++ + S+ TA +E
Sbjct: 151 DGNDKVILFTGSFAKISGTIDGGAGTDTLQANDLTGLTIKNVEILQPATSSVTASTAQFE 210
Query: 370 DLIQVIGQDVFESMKHFYEFGL 391
++IG S++ G
Sbjct: 211 SFDKIIGTGSDSSVQLVLTDGA 232
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 59/183 (32%), Gaps = 21/183 (11%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVKNYIDLNTE---SWSSIGGYEK 258
N Y I SG D + L K ++DL+ E S +SI G
Sbjct: 368 NEYGFTGSSAQLESFDKI--SGTKDAFGSSIAILRLTDKAHVDLSDELGNSRASIFGTVS 425
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + G+ GND+ G+ N+ ++GND G G D F + + K
Sbjct: 426 GIDVKTGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIK- 484
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D ++D + + A + D + + L VI
Sbjct: 485 ------------GGAGDDKITDGDNMSTAPEAFDIDAGDGDDAINLQSHSSALSGVIDGG 532
Query: 379 VFE 381
Sbjct: 533 AGT 535
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 1/137 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N TI + + + G GND + G N+V +G+D + T
Sbjct: 447 FDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIKGGAGDDKITDGDNMSTAPEAFD 506
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
N A D + + L+ + + + +T +++
Sbjct: 507 IDAGDGDDAINLQSHSSALSGVIDGGAGTDTLQVIKPTLGPGQ-ESMGLAGFTIKNVEIL 565
Query: 373 QVIGQDVFESMKHFYEF 389
+ G +V S F F
Sbjct: 566 ETAGAEVLASAAQFESF 582
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 24/64 (37%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + + + + G++GND+ N+ + GND G G D S
Sbjct: 250 GPNVSGIDVTTGSARDLLTGTAGNDIFDAGDGNDYINGNGGNDRLIGGKGDDVIVDGDVS 309
Query: 314 YLYK 317
L
Sbjct: 310 SLSS 313
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 53/183 (28%), Gaps = 33/183 (18%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L+ G + ID+ T S + G N + + G+ GND +IG ++V
Sbjct: 244 LNYIFGGPNVSGIDVTTGSARDLLTGTAGNDIFDAGDGNDYINGNGGNDRLIGGKGDDVI 303
Query: 290 ---------------FESSGND-------------VFDGSSGLDTFFYYAPSYLYKIYRF 321
GND DG +G+DT + L I F
Sbjct: 304 VDGDVSSLSSEVFNIDAGDGNDIVTLQTQSQGLSGTIDGGTGIDTLRVSRLAGL-TIKNF 362
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E L +++ D+ + ++ DL +G
Sbjct: 363 EILETNEYGFTGSSAQLESFDKIS---GTKDAFGSSIAILRLTDKAHVDLSDELGNSRAS 419
Query: 382 SMK 384
Sbjct: 420 IFG 422
>gi|198422839|ref|XP_002124617.1| PREDICTED: similar to matrix metalloproteinase 1 [Ciona
intestinalis]
Length = 684
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 63/192 (32%), Gaps = 47/192 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIH 76
+ WSN ++Y + T + + + A W+ L F +T
Sbjct: 249 VEGDRWSNTKLKYYIENRTPD--------MTAAQVDDSIQRAFDVWANYTTLRFRQTRNP 300
Query: 77 SDIKFISSNNGYVCTPRYD---------SRYFME---INFDKADVWRYGIGKGTILSHNA 124
S+ F S Y +F +FD+A+ + Y G G L A
Sbjct: 301 SEANFKISFGAGSHGDPYAFDGKGGTLAHAFFPSDGRAHFDEAEHYTYKGGPGVNLFIVA 360
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GHALGL H N S+M+ F + +
Sbjct: 361 AHEFGHALGLGHSSVPN-------------------SLMAPFYQGYT-ANFQLH------ 394
Query: 185 VSDIVAVQKIYG 196
DI +Q++YG
Sbjct: 395 DDDIAGIQQLYG 406
>gi|148557446|ref|YP_001265028.1| glycoside hydrolase family protein [Sphingomonas wittichii RW1]
gi|148502636|gb|ABQ70890.1| glycoside hydrolase, family 16 [Sphingomonas wittichii RW1]
Length = 686
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G+D LD G + I+ + S I G E N +I + + V G GND + G
Sbjct: 494 NAGNDTLDG---GNGSDRINGGADDDS-IRGGEGNDSINGNLGNDHVDGGIGNDYLRGGQ 549
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ GND+ G G D A + F + A + DF V+ L
Sbjct: 550 GNDTLIGGDGNDILSGDLGADLLTGGAGIDRF---VFAGSGSTLAAPDRIADFQDGVDLL 606
Query: 345 RFA 347
Sbjct: 607 SIG 609
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 3/144 (2%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESV 271
+ TI+ G+D L G + DL S + G N T+ + +
Sbjct: 450 QGGAGADTIHGGAGNDHLYGQSPYGGPDGADLIDGGDGSDYLQGNAGNDTLDGGNGSDRI 509
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G + +D + G N+ + GND DG G D + I N I+ D
Sbjct: 510 NGGADDDSIRGGEGNDSINGNLGNDHVDGGIGNDYLRGGQGNDTL-IGGDGNDILSGDLG 568
Query: 332 EHKQDFLSDVERLRFADQCIDSVN 355
+ ++R FA
Sbjct: 569 ADLLTGGAGIDRFVFAGSGSTLAA 592
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 16/143 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVI---------------GNSANNVFFESSGNDV 297
+ G + I +++ G +GND + G ++ ++GND
Sbjct: 440 LTGTAGHDDIQGGAGADTIHGGAGNDHLYGQSPYGGPDGADLIDGGDGSDYLQGNAGNDT 499
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
DG +G D A + ++I N+H + + + LR +
Sbjct: 500 LDGGNGSDRINGGADDDSIRGGEGNDSINGNLGNDHVDGGIGN-DYLRGGQGNDTLIGGD 558
Query: 358 QRSILEYTASYEDLIQVIGQDVF 380
IL + L G D F
Sbjct: 559 GNDILSGDLGADLLTGGAGIDRF 581
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 54/202 (26%), Gaps = 27/202 (13%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY---YAPSYLYKIYRFENAIIVYD 329
+ +D++ G + ++ +G D G +G D + Y + +
Sbjct: 433 APASDDMLTGTAGHDDIQGGAGADTIHGGAGNDHLYGQSPYGGPDGADLIDGGDGSDYLQ 492
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFY 387
N + + L + + + + +G D + +
Sbjct: 493 GN-------AGNDTLDGGNGSDRINGGADDDSIRGGEGNDSINGNLGNDHVDGGIGNDYL 545
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G I D D L G+D G + F
Sbjct: 546 RGGQGNDTLIGGDG------NDILSGDLGADLLTGG---------AGIDRFVFAGSGSTL 590
Query: 448 SHEDLINAFADAPDLVQVGKDH 469
+ D I F D DL+ +G
Sbjct: 591 AAPDRIADFQDGVDLLSIGFRP 612
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 43/164 (26%), Gaps = 19/164 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGN---------------DVFDGSSGLDTFFYYAPS 313
+ + G++G+D + G + + +GN D+ DG G D A +
Sbjct: 438 DMLTGTAGHDDIQGGAGADTIHGGAGNDHLYGQSPYGGPDGADLIDGGDGSDYLQGNAGN 497
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ I A++ + + L + LI
Sbjct: 498 DTLD-GGNGSDRINGGADDDSIRGGEGNDSINGNLGNDHVDGGIGNDYLRGGQGNDTLIG 556
Query: 374 VIGQDVFESM--KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
G D+ G R F + D F
Sbjct: 557 GDGNDILSGDLGADLLTGGAGIDR-FVFAGSGSTLAAPDRIADF 599
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 4/132 (3%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG++ + ++GN +N G+D G G D F + A S + F+ DA+
Sbjct: 60 VGNALANRIVGNGESNQLEGRGGSDTLTGGGGSDVFIFGAGSGNDVVNDFKPGNA-ADAD 118
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L+D + + + L + IG ++ + +
Sbjct: 119 VIRLAGLTDFKSFQTVLGAMTQQGSDVVLRLSGQDAVTIRNATIGDFTADNFQLPLD--- 175
Query: 392 SEGRDITFDSYL 403
G +F
Sbjct: 176 RSGLTPSFADEF 187
>gi|14030785|ref|NP_114395.1| interstitial collagenase A precursor [Mus musculus]
gi|78099009|sp|Q9EPL5|MMP1A_MOUSE RecName: Full=Interstitial collagenase A; AltName: Full=Matrix
metalloproteinase-1a; Short=MMP-1a; AltName:
Full=Mcol-A; Flags: Precursor
gi|11877304|emb|CAC18880.1| putative matrix metalloproteinase [Mus musculus]
gi|26340288|dbj|BAC33807.1| unnamed protein product [Mus musculus]
gi|28300432|gb|AAO37582.1| collagenase-like A [Mus musculus]
gi|109734590|gb|AAI17757.1| Matrix metallopeptidase 1a (interstitial collagenase) [Mus
musculus]
Length = 464
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 68/224 (30%), Gaps = 59/224 (26%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A + + W+ + Y T + + +AR A W
Sbjct: 86 KPRCGVPDVAPYAITHNNPRWTKTHLTYSILNYTPYLPKAVV------EDAIAR-AFRVW 138
Query: 63 SKVVDLTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKAD 108
S V LTF+ DI +N P Y ++++D +
Sbjct: 139 SDVTPLTFQRVFEEEGDIVLSFHRGDHGDNNPFDGPNYKLAHTFQPGPGLGGDVHYDLDE 198
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SY- 165
W + A HE+GH+LGL H +M SY
Sbjct: 199 TWTNSSENFNLFYVTA-HELGHSLGLTHSSDIGA-------------------LMFPSYT 238
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNI 206
+ +D +++ DI +Q +YG P G
Sbjct: 239 WYTEDFVLNQ----------DDINRIQDLYGPSPNPIQPTGATT 272
>gi|297263898|ref|XP_002798895.1| PREDICTED: matrix metalloproteinase-17-like [Macaca mulatta]
Length = 845
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIHS-DIKFI 82
P LS+ + +P ++ R +AL WS + L F E + + DI+
Sbjct: 369 APTKWNKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQID 428
Query: 83 SS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALH 126
S N+GY + + +FD + W + G L A+H
Sbjct: 429 FSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 488
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 489 EFGHAIGLSH 498
>gi|296480357|gb|DAA22472.1| matrix metalloproteinase 7 [Bos taurus]
Length = 267
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 69/194 (35%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W++ + Y+ T+ + +L VA+ A WS+ + LTF+ +DI
Sbjct: 104 WTSKVVTYRIMSYTSDLPHITVNQL------VAK-AFKIWSEAIPLTFKRLRWGTADIMI 156
Query: 82 ISSNNGYVCTPRYDSRY-------------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD+ + W GIG G + A HE+
Sbjct: 157 GFARRAHGDPYPFDGPGATLAHAFAPGPGLGGDAHFDEDERWTDGIGIGVNFLYVATHEL 216
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H N VM P S D+ + DI
Sbjct: 217 GHSLGLSHSSDPNA-------------------VM---YPTYSKEDSKNFKLSQ---DDI 251
Query: 189 VAVQKIYGAPKGSL 202
+Q +YG S
Sbjct: 252 NGIQLLYGKRNDSR 265
>gi|258541344|ref|YP_003186777.1| hypothetical protein APA01_02450 [Acetobacter pasteurianus IFO
3283-01]
gi|256632422|dbj|BAH98397.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635479|dbj|BAI01448.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638534|dbj|BAI04496.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641588|dbj|BAI07543.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256644643|dbj|BAI10591.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256647698|dbj|BAI13639.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256650751|dbj|BAI16685.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653742|dbj|BAI19669.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 516
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 66/191 (34%), Gaps = 26/191 (13%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 540
FD YL D++ G D HY+ +GV E RNP+ F Y ++++I
Sbjct: 20 KFDIEFYLKENPDVKKS-GLD---PIIHYVLYGVHENRNPNDNFNTEIYYNLYKNVIGKN 75
Query: 541 ADAPDLVQAGKDH-------------FSNFGYEEGR---SITFNPDLYLTSYDDLWNVFG 584
+ DH + + R FN D Y+ D+ +
Sbjct: 76 ENPFAHYIRNNDHLFFFEKGLLQEYSYVSITNALNRLKKYPFFNEDDYVRMNSDVSSASM 135
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHK-KVDLYTDY 643
A+H + +G+ EGR + + + N + + + + Y
Sbjct: 136 ----PTARHALLYGIGEGREIFSKRSIVRFLGNECKHDINYKITDKVYGKNFPKTIGVFY 191
Query: 644 FGDGNYYDSDL 654
+GN + +L
Sbjct: 192 HSEGNSFIQEL 202
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 25/140 (17%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD YL D++ HY+ +GV E RNP+ F Y ++++I
Sbjct: 21 FDIEFYLKENPDVKK----SGLDPIIHYVLYGVHENRNPNDNFNTEIYYNLYKNVIGKNE 76
Query: 458 DAPDLVQVGKDHFSNF--GCEEG--------------RFVTFDSYLYLGSYDDLRNVFGS 501
+ DH F G + ++ F+ Y+ D+ +
Sbjct: 77 NPFAHYIRNNDHLFFFEKGLLQEYSYVSITNALNRLKKYPFFNEDDYVRMNSDVSSA--- 133
Query: 502 DRGAAARHYITHGVKEGRNP 521
ARH + +G+ EGR
Sbjct: 134 -SMPTARHALLYGIGEGREI 152
>gi|17227772|ref|NP_484320.1| hypothetical protein alr0276 [Nostoc sp. PCC 7120]
gi|17135254|dbj|BAB77800.1| alr0276 [Nostoc sp. PCC 7120]
Length = 2348
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 71/203 (34%), Gaps = 20/203 (9%)
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V D+D DS S++S P + + + D + Y G LGN
Sbjct: 2077 NVLTNDSDVNGDSLQLSLVS--NPVNGVAVVNDNGTPGNFADDFIT----YTPNTGYLGN 2130
Query: 205 NIYKIEVQQK-----DSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + + + TI SGG D ++ G N DL I G
Sbjct: 2131 DSFTYSISDGKGGTATATVSLTINASGGIIGTPDNDILTGT-NRNDL-------IRGLGG 2182
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + +++ G G D+++G + N+ + ND G +G D + L
Sbjct: 2183 NDLLIGGNGNDTLYGDRGKDILLGGNGNDTLYGGDDNDTLIGGNGDDLLVGGKGNDLLIG 2242
Query: 319 YRFENAIIVYDANEHKQDFLSDV 341
+ + D + D ++D
Sbjct: 2243 GNGRDRFYLSDTRTGEFDIITDF 2265
>gi|117618784|ref|YP_857965.1| hypothetical protein AHA_3491 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560191|gb|ABK37139.1| flagellin hook IN motif family [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 5047
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 1/164 (0%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D ++ LIGG N I + G N + +++ G SGND + G
Sbjct: 4836 FDQSSNNDKADVLIGGDGNDILFGQGGDDFLFGGAGNDILFGGAGNDTLYGESGNDTLYG 4895
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S N+ + SG+D G G D + + K + + D
Sbjct: 4896 GSGNDTLYGGSGDDTLSGGLGNDILVGGLGNDILKGDGGADTFTWLQGDTAAGSVAKDY- 4954
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ F+ D +++ + + + DL ++ H
Sbjct: 4955 VVDFSKAEGDKLDLSDLLDHDGSRNQNDLKSLLSVFQDSEGVHL 4998
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 15/211 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL----------LDLTLIGGVKNYIDL 245
G L N I V P I GDD+ ++ +K Y+
Sbjct: 4756 GVNASDLANAILGTSVNNL--PGSDRIDGGAGDDILFGDAIHFAGINGEGYAAIKQYVAG 4813
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ S + + + + DV+IG N++ F G+D G +G D
Sbjct: 4814 KLSAGSVTDAQVHDYITDHASEFDQSSNNDKADVLIGGDGNDILFGQGGDDFLFGGAGND 4873
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F A + + + N+ D + L V IL+
Sbjct: 4874 ILFGGAGNDTLYGESGNDTLYGGSGNDTLYGGSGD-DTLSGGLGNDILVGGLGNDILKGD 4932
Query: 366 ASYEDLIQVIGQDVFESMK-HF-YEFGLSEG 394
+ + G S+ + +F +EG
Sbjct: 4933 GGADTFTWLQGDTAAGSVAKDYVVDFSKAEG 4963
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 13/155 (8%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + + +GG ++ + ++V D + G + N++ G
Sbjct: 4227 GTSGNDYIVSVKGGGDYFVGGAGNDVLVGGNSV--------SGDTLDGGTGNDILVAGLG 4278
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSDVERLRFADQ-- 349
D G +G D Y I R + + E+ L D+E ++F D
Sbjct: 4279 GDTLFGGAGTDLAVLMGSRANYVIERRSDGGFNFLVKENGVTISKSLYDIELVQFDDGIY 4338
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + ++ Y I D S +
Sbjct: 4339 QFNQTDGTLTAVQPSVVDYPFEISASLTDRDGSEQ 4373
>gi|260575552|ref|ZP_05843550.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259022195|gb|EEW25493.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 2455
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 11/140 (7%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+ Y I+T++ S G D ++ + V Y+D N T
Sbjct: 300 AGSYAYNGGGASGSFSQIETLWLSDGADSVNASATT-VGQYLD----------AVAGNDT 348
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + ++++G +GND ++G + N+ + +GND G +G D+ A + + I
Sbjct: 349 LTGGSGADTLLGGTGNDSLVGGAGNDTIYGGAGNDTLAGGTGNDSLLGEADADSFAIGTS 408
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+ + +
Sbjct: 409 QGTDTIVGGETGTDTDTLNF 428
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 12/155 (7%)
Query: 237 GGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ + I+ +SW + N + + +S+ G GND ++G + N+ +GN
Sbjct: 1349 TALADTINGAADSWGMTYSTGAGNDVVTGGSGADSISGGDGNDSLVGGAGNDTVDGGTGN 1408
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D DG +G D A + + + D L E + DQ +
Sbjct: 1409 DTLDGGAGNDLLLGGAGTDSFALQDG-----------FGNDTLVGGESVGDWDQLSLAAL 1457
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
SI A LI G F ++ +
Sbjct: 1458 TAPVSITYTGADTGTLIGAGGAVTFSEIESWVLTA 1492
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 64/208 (30%), Gaps = 20/208 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE------------SWSSIGG 255
+ ++ G DLLD + + +DL T + ++ G
Sbjct: 513 TASDTIRGGAGSDSLAGGLGTDLLDYSDATAAVS-VDLATGITGGAALGDSISGFEAVLG 571
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
T+ T + + G GND ++G + N+ GND G +G D+ A + L
Sbjct: 572 SAYADTLTGSTGADRLTGGDGNDSLVGGAGNDTLDGGLGNDTLRGGAGSDSLLGGAGTDL 631
Query: 316 YKIYRFENAIIV-----YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ V D +S E + + L +
Sbjct: 632 LDYSDATAGVSVDLSTGATGGGALGDTISGFEAVLGSAYADTLTGSTGDDSLSGGTGGDI 691
Query: 371 LIQVIGQDVFESMKHFYEF--GLSEGRD 396
L+ G D F G S+G D
Sbjct: 692 LVGGAGNDTLLGEADADSFQIGTSQGTD 719
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 55/204 (26%), Gaps = 18/204 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G+ I I+ G+D + + I
Sbjct: 1513 GNDTITTGSGDDFINASTGAGTDANLIHSGAGNDYIATSAGNDT-------------IYA 1559
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+A +V G +GND + G + N+V GND G G D A S +
Sbjct: 1560 GSGNDTVAGGAGDSTVYGDAGNDFIAGYAGNDVIDGGDGNDSLYGGDGNDVLTGGAGSDV 1619
Query: 316 YKIYRFE-----NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
NA D+ + D+ V + + Y
Sbjct: 1620 ISAGAGSDLINVNAAAGVDSIDGGADWDQLVFLGDIGGPGVSVSFTGATANYSYAGGGSG 1679
Query: 371 LIQVIGQDVFESMKHFYEFGLSEG 394
+ ++ + G
Sbjct: 1680 NATGFENYTLTANADVFDASGASG 1703
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 6/127 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVI 268
S + G+D + GG I LN ++ + + G + +
Sbjct: 1713 NDSITGSIGADYLAAGDGNDTVS----GGDGADI-LNGDAGNDLLFGGAGDDMVLLGVGN 1767
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++ G GND++ N ++ + +GND G +G DT + + L++ + I++
Sbjct: 1768 DTGYGGDGNDLINSNGGASLLYGGAGNDTLQGGAGDDTMYGGTGADLFQSSMDNDTIVIE 1827
Query: 329 DANEHKQ 335
+ +
Sbjct: 1828 NGFGNDT 1834
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 59/223 (26%), Gaps = 35/223 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--------DLNT 247
G G S I G DL D + DL +
Sbjct: 1997 GVNVTFTGTEAGSYSYASGGSGSFTGIEQLNGTDLADTINGAAATGPLTFFGMDGNDLIS 2056
Query: 248 ESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G N T+A + G +GND++ GN + G+D G +G D
Sbjct: 2057 GGAGGDLLSGDAGNDTLAGGAGEDFADGGAGNDLLSGNDGFDTLSGGEGDDTLLGGTGDD 2116
Query: 306 TFFYYAPSY-------------------------LYKIYRFENAIIVYDANEHKQDFLSD 340
+ + A ++ + D ++D
Sbjct: 2117 VLLGDLGNDSLQGDAGNDLLDSGDGDDTVTGGVGDDTLGTGSGADLLVLTTDGGTDLVTD 2176
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D ++V L A + +QV ++
Sbjct: 2177 FDITLVDGFTNDQLDVSDLHDLGGNAVHSWNVQVTDDGNGNAL 2219
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 39/139 (28%), Gaps = 5/139 (3%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+I G +I+ +SV SGNDV+ G + +GND+ DG + D
Sbjct: 1907 GGGDTITGGSGADSISGGDGNDSVSSGSGNDVLTGGDGFDTLAGGAGNDLIDGGADGDVL 1966
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQD-----FLSDVERLRFADQCIDSVNVKQRSIL 362
+ I E + E ++ S + L
Sbjct: 1967 LVGQGGGVDTITGGETGFDQDQLQFGGTTEGVNVTFTGTEAGSYSYASGGSGSFTGIEQL 2026
Query: 363 EYTASYEDLIQVIGQDVFE 381
T + +
Sbjct: 2027 NGTDLADTINGAAATGPLT 2045
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 54/161 (33%), Gaps = 9/161 (5%)
Query: 223 YDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
Y G+D L+ TL GG + L + G + N I+ + ++G +GN
Sbjct: 817 YGGLGNDTLNGDAGNDTLYGGAGDDWLLTGSENNMAFGGDGNDYISDMSGNSLLMGEAGN 876
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D ++G N+ G D G +G+D Y + + A D
Sbjct: 877 DTILGGDGNDTINGGLGADSLAGGTGIDLLDYSDAAAGVSVDLATGAT----GGAALGDT 932
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+S E + + + A + L G D
Sbjct: 933 ISGFEAVLGSAYADTLTGSTGADSILGGAGSDLLTGGAGND 973
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 7/159 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ ++I + S TI G+D + G D N S+
Sbjct: 16 TTGADSILGLGGADSLSGLAGNDTIDAGTGNDTVTGGDGGDYVLLGDGND-SFGDWNTEA 74
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N T+ +S++G + ND++ G++ ++ +G D G +G D Y S +
Sbjct: 75 GNDTVYGGLGDDSIIGGADNDLLYGDAGSDTLSGGAGTDNVIGGAGND---YIMVSDDHD 131
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ V + FA S +
Sbjct: 132 FDAIDGGTEFDTIWFGNYLTTQGV-YVSFAGTGSGSYDF 169
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 42/144 (29%), Gaps = 2/144 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G S G + + +G D +T G N + SI G
Sbjct: 1327 GTGTASSGGYTLAFTEVEAITGTALADTINGAADSWGMTYSTGAGNDVVTGGSGADSISG 1386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFFYYAPS 313
+ N ++ ++V G +GND + G + N++ +G D G DT
Sbjct: 1387 GDGNDSLVGGAGNDTVDGGTGNDTLDGGAGNDLLLGGAGTDSFALQDGFGNDTLVGGESV 1446
Query: 314 YLYKIYRFENAIIVYDANEHKQDF 337
+ D
Sbjct: 1447 GDWDQLSLAALTAPVSITYTGADT 1470
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 59/173 (34%), Gaps = 7/173 (4%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI + G+D L T G + + L S+ G N TI T ++V G G D V
Sbjct: 3 TISGTTGNDTL--TGTTGADSILGL--GGADSLSGLAGNDTIDAGTGNDTVTGGDGGDYV 58
Query: 281 IGNSANNVF---FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ N+ F +GND G G D+ A + L + + ++
Sbjct: 59 LLGDGNDSFGDWNTEAGNDTVYGGLGDDSIIGGADNDLLYGDAGSDTLSGGAGTDNVIGG 118
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + D D+++ + +Y V + +G
Sbjct: 119 AGNDYIMVSDDHDFDAIDGGTEFDTIWFGNYLTTQGVYVSFAGTGSGSYDFYG 171
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 16/153 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-- 267
+ ++ G DLLD + D + T+
Sbjct: 611 NDTLRGGAGSDSLLGGAGTDLLDYS---------DATAGVSVDLSTGATGGGALGDTISG 661
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
E+V+GS+ D + G++ ++ +G D+ G +G DT A + ++I + +
Sbjct: 662 FEAVLGSAYADTLTGSTGDDSLSGGTGGDILVGGAGNDTLLGEADADSFQIGTSQGTDSI 721
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
D + + FA +
Sbjct: 722 VGGETG-----YDYDYVDFALATAGVTVTFSGN 749
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 13/142 (9%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN+ ++ G DLLD + +DL T + GG
Sbjct: 871 MGEAGNDTILGGDGNDTINGGLGADSLAGGTGIDLLDYS-DAAAGVSVDLATGA---TGG 926
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
TI + E+V+GS+ D + G++ + +G+D+ G +G DT + A +
Sbjct: 927 AALGDTI---SGFEAVLGSAYADTLTGSTGADSILGGAGSDLLTGGAGNDTLIFGAGNDS 983
Query: 316 YKIYRFENAIIVYDANEHKQDF 337
+ D N D
Sbjct: 984 ---VYGGDGADSIDDNIGGYDI 1002
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 71/193 (36%), Gaps = 23/193 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------YEKNMT 261
S TI G+D++ G + ID + S IGG + N T
Sbjct: 1169 NDTVTGSSGADTILAGDGNDVV---TGGAGNDSIDAGAGADSVIGGAGADSIALGDGNDT 1225
Query: 262 I---AQHTVIESVVGSSGNDVV---IGNSANNVFFESSGNDVF----DGSSGLDTFFYYA 311
+ A + +++ G SGND + G S N+V + GND D G DT +
Sbjct: 1226 LSMTASDGLADTIDGGSGNDSINLGTGGSGNDVVYGGVGNDTLTTQYDLGGGNDTLYGGD 1285
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ ++ + ++ LS + A + S YT ++ ++
Sbjct: 1286 GRDVFVAGAGDSIVGGEGGDDFDTIDLSTIP--AAASITLTGNGTGTASSGGYTLAFTEV 1343
Query: 372 IQVIGQDVFESMK 384
+ G + +++
Sbjct: 1344 EAITGTALADTIN 1356
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 41/132 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N T+ + ++++ GNDVV G + N+ +G D G +G D+
Sbjct: 1163 LETGAGNDTVTGSSGADTILAGDGNDVVTGGAGNDSIDAGAGADSVIGGAGADSIALGDG 1222
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + D N + + + L
Sbjct: 1223 NDTLSMTASDGLADTIDGGSGNDSINLGTGGSGNDVVYGGVGNDTLTTQYDLGGGNDTLY 1282
Query: 373 QVIGQDVFESMK 384
G+DVF +
Sbjct: 1283 GGDGRDVFVAGA 1294
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 6/131 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++Y G D +D + G N ID + + G +
Sbjct: 972 NDTLIFGAGNDSVYGGDGADSIDDNIGGYDIGANLIDGGAGNDTIWNGGGNDTVYGGDGD 1031
Query: 268 IESVVGSSGN----DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+SG+ + G++ N+ + G+D G +G D + + + +
Sbjct: 1032 DIIDDHNSGDIAGDSSLFGDAGNDTIWAGGGSDTLYGGTGNDALYGENGADTFVVQDGWG 1091
Query: 324 AIIVYDANEHK 334
+ +
Sbjct: 1092 QDTIGGGSVDA 1102
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 59/192 (30%), Gaps = 7/192 (3%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL---LDLTLIGGVKNYIDLNTESWSS 252
G G Y + G++ + T G + +++
Sbjct: 717 GTDSIVGGETGYDYDYVDFALATAGVTVTFSGNETGSYVAGTGTGSFSQIEQITGSAYAD 776
Query: 253 I---GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ T+ +++ G SG D+ G +++ + GND +G +G DT +
Sbjct: 777 VLNASATTTGATLVGGGGDDTLTGGSGADMFNGGDGHDLEYGGLGNDTLNGDAGNDTLYG 836
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A N D N++ D + + A +I + +
Sbjct: 837 GAGDDWLLTGSENNMAFGGDGNDYISDMSGNSLLMGEAGNDTILGGDGNDTINGGLGA-D 895
Query: 370 DLIQVIGQDVFE 381
L G D+ +
Sbjct: 896 SLAGGTGIDLLD 907
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 55/178 (30%), Gaps = 21/178 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWS 251
G S+ +NI ++ TI++ GG+D + ++ + S
Sbjct: 987 GDGADSIDDNIGGYDIGANLIDGGAGNDTIWNGGGNDTVYGGDGDDIIDDHNSGDIAGDS 1046
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
S+ G N TI G+D + G + N+ + +G D F G DT
Sbjct: 1047 SLFGDAGNDTI---------WAGGGSDTLYGGTGNDALYGENGADTFVVQDGWGQDTIGG 1097
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + +DV D + + I+ T +
Sbjct: 1098 GSVDAAIDTLDMSAVTVPLTV------TFTDVNYGTITDGTNNITFLNVERIITGTGA 1149
>gi|198420757|ref|XP_002125302.1| PREDICTED: similar to matrix metalloproteinase 1 [Ciona
intestinalis]
Length = 533
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 61/198 (30%), Gaps = 49/198 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF--EET 73
+ L+ W + + YK + + + + R A W L F
Sbjct: 101 YALQGSKWDHKHLTYKFINHSPDLPASQV-------ETEIRAAFQWWEDNSSLRFSKVAK 153
Query: 74 SIHSDIKFISSNN-----------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG-TILS 121
S +DI+ + S G Y +FD+A+ W G G L
Sbjct: 154 SQRADIEILFSAGAHGDGDPFDGPGQTLAHAYFPGSGGNAHFDEAERWSISSGSGKVNLR 213
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H +M+ F S S
Sbjct: 214 IVAAHEFGHSLGLSHSDVSEA-------------------LMAPFYNPRSSGLHS----- 249
Query: 182 TPMVSDIVAVQKIYGAPK 199
DI A+Q++YG
Sbjct: 250 ----DDIQAIQRLYGKSM 263
>gi|254416848|ref|ZP_05030597.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196176394|gb|EDX71409.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 321
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
E++ ++ G +N TI ++ +VG SGND +IG S N+ GNDV G SG D
Sbjct: 138 ENFINVTGTSQNDTIIGNSADNLLVGGSGNDTLIGGSGNDRLVGGDGNDVLTGGSGNDRL 197
Query: 308 FYYAPSYLYKIYRFENAII--------VYDANEHKQDFLSDVERLR 345
+ + + + +++ D +SD + R
Sbjct: 198 VGGDGNDVLTGGSGNDKLTGGSGNDWFTFNSKNEGIDTISDFDVHR 243
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++G GND +IG N+ + SGND G SG DT
Sbjct: 6 GGRGNDRLIGGRGNDRLIGGRGNDRLWGGSGNDRLWGGSGNDTLNGGTGIDTADYSNLGQ 65
Query: 324 AIIVYDA-----NEHKQDFLSDVERLRFADQCIDSVNVKQR 359
AI + D + +E++ A ++++
Sbjct: 66 AITLESVGVINKGSAGTDQIQFIEKIIGATGQANAIDGSTG 106
>gi|158340439|ref|YP_001521795.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
gi|158310680|gb|ABW32294.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 943
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 6/122 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + N +++ G +GND +IG + GND G +G DT
Sbjct: 629 SIKGDKWNNIFNGGDGNDTLEGGAGNDTLIGGEGEDTLEGGGGNDTLIGGAGSDTLIGDV 688
Query: 312 PSYLYK-IYRFENAIIVYDANEHKQDFLSDV-----ERLRFADQCIDSVNVKQRSILEYT 365
+ I V D E D + + L ++ + + + K R++
Sbjct: 689 VAGNDTLIVDAGADTFVLDTTEGGIDTIRGFSLAENDVLLIDNKSLGTSHAKARNLNGML 748
Query: 366 AS 367
++
Sbjct: 749 SA 750
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 46/111 (41%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + N + + + + G +GND ++G + ++ G+D+ DG G+D + +
Sbjct: 799 LATGDGNDRLTGGSGDDLLSGGAGNDTLLGGTHKDLLLGGRGDDLLDGGKGIDRLYGGSG 858
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + I + + + QDF D D + + + +++
Sbjct: 859 ADTFVINNTVSGLNKRSGIDVIQDFSVDEFDHIQIDASVFGIGINDHHLVQ 909
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 13/122 (10%)
Query: 217 PFIQTIYDSGGDDLL---DLTLIG-GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
P Q IY GG+D + DL VK+Y++ + S + G N + + +
Sbjct: 120 PVSQNIYGGGGNDTIIAHDLQGYSDSVKSYLNGDPSSINQFHGEAGNDILKGNAFQNLLY 179
Query: 273 GSSGND---------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G +GND + GN N+ + G D G G D ++
Sbjct: 180 GGTGNDTLDGGGGDDFLSGNEDNDKLWGGDGEDQLFGGIGNDILVGGDGYDEIDAGDGDD 239
Query: 324 AI 325
I
Sbjct: 240 TI 241
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE ++GS +D + G+ NN+F GND +G +G DT +
Sbjct: 618 IEGIIGSKWDDSIKGDKWNNIFNGGDGNDTLEGGAGNDTLIGGEGEDTLE----GGGGND 673
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
D L + + D I
Sbjct: 674 TLIGGAGSDTLIG-DVVAGNDTLIVDAGADTF 704
>gi|268679630|ref|YP_003304061.1| hypothetical protein Sdel_0997 [Sulfurospirillum deleyianum DSM
6946]
gi|268617661|gb|ACZ12026.1| hypothetical protein Sdel_0997 [Sulfurospirillum deleyianum DSM
6946]
Length = 582
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
++IY + +K I SGG+D + TL GG L ++ G
Sbjct: 193 DDIYGGSLAEKLYGGEGDDFIDGSGGNDTIEGAEGKDTLDGGDGTDTLLGGTGDDNLFGD 252
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ T+ +++ G SG D ++G + N+ G D +G +G DT Y
Sbjct: 253 AGDDTLNGGEDNDTLNGGSGLDTLLGEAGNDTLIGGGGADTLNGGTGSDTLLGG---DDY 309
Query: 317 KIYRFENAIIVYDANEHK 334
Y N + D++
Sbjct: 310 DTYIAGNGDTINDSDGSG 327
>gi|158339631|ref|YP_001521020.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
gi|158309872|gb|ABW31488.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 943
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 6/122 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + N +++ G +GND +IG + GND G +G DT
Sbjct: 629 SIKGDKWNNIFNGGDGNDTLEGGAGNDTLIGGEGEDTLEGGGGNDTLIGGAGSDTLIGDV 688
Query: 312 PSYLYK-IYRFENAIIVYDANEHKQDFLSDV-----ERLRFADQCIDSVNVKQRSILEYT 365
+ I V D E D + + L ++ + + + K R++
Sbjct: 689 VAGNDTLIVDAGADTFVLDTTEGGIDTIRGFSLAENDVLLIDNKSLGTSHAKARNLNGML 748
Query: 366 AS 367
++
Sbjct: 749 SA 750
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 46/111 (41%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + N + + + + G +GND ++G + ++ G+D+ +G G+D + +
Sbjct: 799 LATGDGNDRLTGGSGDDLLSGGAGNDTLLGGTHKDLLLGGRGDDLLNGGKGIDRLYGGSG 858
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + I + + + QDF D D + + + +++
Sbjct: 859 ADTFVINNTVSGLNKRAGIDVIQDFSVDEFDHIQIDASVFGIGINDHHLVQ 909
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 13/122 (10%)
Query: 217 PFIQTIYDSGGDDLL---DLTLIG-GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
P Q IY GG+D + DL VK+Y++ + S + G N + + +
Sbjct: 120 PVSQNIYGGGGNDTIIAHDLQGYSDSVKSYLNGDPSSINQFHGEAGNDILKGNAFQNLLY 179
Query: 273 GSSGND---------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G +GND + GN N+ + G D G G D ++
Sbjct: 180 GGTGNDTLDGGGGDDFLSGNEDNDKLWGGDGEDQLFGGIGNDILVGGDGYDEIDAGDGDD 239
Query: 324 AI 325
I
Sbjct: 240 TI 241
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE ++GS +D + G+ NN+F GND +G +G DT +
Sbjct: 618 IEGIIGSKWDDSIKGDKWNNIFNGGDGNDTLEGGAGNDTLIGGEGEDTLE----GGGGND 673
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
D L + + D I
Sbjct: 674 TLIGGAGSDTLIG-DVVAGNDTLIVDAGADTF 704
>gi|332709829|ref|ZP_08429786.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332351427|gb|EGJ31010.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 367
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 62/175 (35%), Gaps = 20/175 (11%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TIY GG+D + G I + G + I + +++ G +GND
Sbjct: 205 DTIYGQGGNDTI----FGSEGVNI---------LYGGAGDDLIFGGSNSDNIYGGTGNDR 251
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ + +N + GND D +G D + ++ ++ +++ D +
Sbjct: 252 IFSSGGSNSVYGGIGNDFIDTGTGNDFVVGGFGNDTIRLGGGQDIVVLE--ARKGTDTII 309
Query: 340 DVE----RLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ E L + ++ Q ++ +++ V+ ++ F
Sbjct: 310 NFEAGKMFLGLSGALTFSNLTFNQSGGDVEISANSEVLAVVNNAQVSTIASASNF 364
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + T+ +++ G GND + G+ N+ + +G+D+ G S D +
Sbjct: 189 IVGTSNDETLFGTADNDTIYGQGGNDTIFGSEGVNILYGGAGDDLIFGGSNSDNIYGGTG 248
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ +I+ + VY DF+
Sbjct: 249 ND--RIFSSGGSNSVYGGI--GNDFI 270
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 51/137 (37%), Gaps = 14/137 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E +VG+S ++ + G + N+ + GND GS G++ + A L I+ N+ +Y
Sbjct: 187 EVIVGTSNDETLFGTADNDTIYGQGGNDTIFGSEGVNILYGGAGDDL--IFGGSNSDNIY 244
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHF 386
+ +R+ + ++ + ++ G D +
Sbjct: 245 GG--------TGNDRIFSSGGSNSVYGGIGNDFIDTGTGNDFVVGGFGNDTIRLGGGQDI 296
Query: 387 YEFGLSEGRD--ITFDS 401
+G D I F++
Sbjct: 297 VVLEARKGTDTIINFEA 313
>gi|126729474|ref|ZP_01745288.1| type I secretion target repeat protein [Sagittula stellata E-37]
gi|126710464|gb|EBA09516.1| type I secretion target repeat protein [Sagittula stellata E-37]
Length = 907
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 18/136 (13%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + + IY GG+D +D +GG S+ G + N ++
Sbjct: 524 YDAQGTDPEGIWTNVIYGGGGNDTID--GLGGDD-----------SLYGEDGNDSVDGGY 570
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ V G +GND + G + + S +DV G G D+ A + L I+ + I
Sbjct: 571 GNDHVSGGTGNDTLSGGAGVDTLDGGSEDDVLAGGEGADSIAGGAGNDL--IHAAQGDTI 628
Query: 327 VYDANEHKQDFLSDVE 342
D ++ V+
Sbjct: 629 D---AGGGDDTITLVD 641
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/345 (14%), Positives = 94/345 (27%), Gaps = 51/345 (14%)
Query: 70 FEETSIHSDIKFISSNNGYVCTP----RYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
F + + + D+ + G S+Y Y G+G +
Sbjct: 230 FTQDTGNIDVTLGFTGTGNNNPTFEVDTSQSQYSQADEGFSGTSSLYLFGQGDGATSRTT 289
Query: 126 HEIGHALGLMHPGSY-NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
G + G N + + +D N + ++ +Y TP+
Sbjct: 290 MTFGRSAGASVEDEVVNVSFRINDIDWGANNHTDQITINAYDADG------------TPV 337
Query: 185 VSDIVAVQKIYGAPKGSLGNNIY--KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
I A G+ GN I + D+ I +G +++ N
Sbjct: 338 AVTITA-----GSTDTVSGNTITAGTVAEATGDAGGSALIEIAGPVTTVEIIYGNLQSNT 392
Query: 243 IDL-----------NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ + S+ G N TI +++ G + +D + G +
Sbjct: 393 QGIWVTDVQFEAVPIAQGDDSLSGGTGNDTIYGEAGNDTLDGGADDDSLTGGEGTDSLLG 452
Query: 292 SSGNDVFDGSSGLDTFFYYAPSY-------------LYKIYRFENAIIVYDANEHKQDFL 338
SGND +G +G D + F D N D +
Sbjct: 453 GSGNDTLEGGAGADVLSGGSGLDFASYASSDAGVTVDLATNTFSGGDATGDTNGGGLDGI 512
Query: 339 SDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ L D +++ + + + G D
Sbjct: 513 IGSAFDDSLTGYDAQGTDPEGIWTNVIYGGGGNDTIDGLGGDDSL 557
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 49/161 (30%), Gaps = 12/161 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IG 254
G N + + D D +L G D W++ I
Sbjct: 485 GVTVDLATNTFSGGDATGDTNGGGL---DGIIGSAFDDSLTGYDAQGTD-PEGIWTNVIY 540
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI +S+ G GND V G N+ +GND G +G+DT +
Sbjct: 541 GGGGNDTIDGLGGDDSLYGEDGNDSVDGGYGNDHVSGGTGNDTLSGGAGVDTLDGGSEDD 600
Query: 315 -------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
I +++ A D + + D
Sbjct: 601 VLAGGEGADSIAGGAGNDLIHAAQGDTIDAGGGDDTITLVD 641
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 48/185 (25%), Gaps = 30/185 (16%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT------------------IAQH 265
D+G L G D N I G + + I
Sbjct: 483 DAGVTVDLATNTFSGGDATGDTNGGGLDGIIGSAFDDSLTGYDAQGTDPEGIWTNVIYGG 542
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ G G+D + G N+ GND G +G DT A +
Sbjct: 543 GGNDTIDGLGGDDSLYGEDGNDSVDGGYGNDHVSGGTGNDTLSGGAGVDTLD----GGSE 598
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A D + A + + + +D I ++ S
Sbjct: 599 DDVLAGGEGADSI--------AGGAGNDLIHAAQGDTIDAGGGDDTITLVDLAEAGSAAI 650
Query: 386 FYEFG 390
F E
Sbjct: 651 FIEGS 655
Score = 40.5 bits (93), Expect = 0.98, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
+ D + PMV+ Y + +I + + I+ + GD
Sbjct: 90 EGGGADGYYTLSEQPMVAGRTYTVSAYDSNPNVAAGDI-AFSFRDYTNGVIE---GTSGD 145
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D +D ++D++ ES G + + +IA ++VV GND V+G ++
Sbjct: 146 DSID-------PAFLDIHGESPDDTTGIDAD-SIAAGAGNDTVVAGWGNDTVLGEDGADL 197
Query: 289 FFESSGNDVFDGSSGL 304
+ G+ D +G
Sbjct: 198 IYGDYGSYTSDNIAGD 213
>gi|118580784|ref|YP_902034.1| Ig family protein [Pelobacter propionicus DSM 2379]
gi|118503494|gb|ABK99976.1| Ig family protein [Pelobacter propionicus DSM 2379]
Length = 2954
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + N T+ T +++ G GNDV+ G + N++ G+D+ G G DT A
Sbjct: 798 TLNGGDGNDTLDGGTGHDTLDGGVGNDVLSGGAGNDILTGGDGDDLLAGGIGNDTLNGGA 857
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ Y + + + + D L + +D
Sbjct: 858 GNDTYLFNLADGQETIVEPGWNSVDTLRFGTGIAASD 894
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 12/165 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GG+D L GG N +TE + + G N I + I+ ++G G+D +
Sbjct: 376 LFGEGGNDQL----FGGDGNDYLDDTEGDNYLDGEAGNDEIWGGSGIDQLMGGDGDDELH 431
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-----YRFENAIIVYDANEHKQD 336
GN+ ++ +GN+ G G DT + + Y + D
Sbjct: 432 GNAGDDYLDGEAGNNTLFGGDGNDTLLGGDGNDQIQGDAGNDYIDGGSGTNTLIGGDGDD 491
Query: 337 FLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++L+ + +++ + L G D
Sbjct: 492 EIYGGSGDDQLQGNLGIDYLDGGEGNDVIDGGDDNDQLFGGDGDD 536
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 70/192 (36%), Gaps = 31/192 (16%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+IY + I T + G D + ++ ++G +N+T+
Sbjct: 2559 GNDIYVVNSTSD----IVTENANDGIDTVQSSVTL--------------TLGANVENLTL 2600
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ I + G++ ++++ GNSA N +GND+ DG +G D A +Y +
Sbjct: 2601 TGTSAI-NGTGTTLDNMLTGNSAINTLTGGAGNDILDGGAGADKLIGGAGDDIYIVD--N 2657
Query: 323 NAIIVYDANEHKQDFLS---------DVERLRFADQCIDSVNVKQ-RSILEYTASYEDLI 372
A ++ + D + +VE L + ++L + L
Sbjct: 2658 TADVITENANEGTDTVKSGVTLTLGNNVENLTLTGTSAINGTGNTLDNMLVGNSGTNTLT 2717
Query: 373 QVIGQDVFESMK 384
G D +
Sbjct: 2718 GGAGNDRLDGGA 2729
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 61/210 (29%), Gaps = 23/210 (10%)
Query: 192 QKIYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDL 245
Q YG ++ +Y GGDD +D G +
Sbjct: 246 QNPYGINFTNVVFQEATAGGADNIYAGTGDDFVYAGGGDDNIDAGTGNDIVYGEDGNDFI 305
Query: 246 NTESWSSI---------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ + N I + + G GNDV+ G S N+ +G+D
Sbjct: 306 TGGADDDVLVGDSDWLAANLHGNDYIDGGDGNDKIAGLGGNDVLFGGSGNDELQGGAGDD 365
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFL---SDVERLRFAD 348
DG +G D F + + + + + D + S +++L D
Sbjct: 366 YLDGEAGDDQLFGEGGNDQLFGGDGNDYLDDTEGDNYLDGEAGNDEIWGGSGIDQLMGGD 425
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L+ A L G D
Sbjct: 426 GDDELHGNAGDDYLDGEAGNNTLFGGDGND 455
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 59/174 (33%), Gaps = 10/174 (5%)
Query: 225 SGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
GDD LD TL+GG E +++ G N + + + ++G G+D
Sbjct: 541 GSGDDYLDGESGNDTLLGGAGADQIFGGEGNNNLQGDAGNDYLEGGSGNDLILGGDGDDT 600
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G N GND +G SG+D + IY ++ D S
Sbjct: 601 IVGGDGENRLEGGGGNDTIEGGSGVDIILGSDGAD--TIYGNGGDDQLHG---DAGDTAS 655
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ L D V L A + + +G V E G+
Sbjct: 656 GNDELYGGDGDDLLVGYGGNDTLVGGAGDDTYVFNLGDGVDTIQDTAGESGIEN 709
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 8/147 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + G+D D + +N+ ++G +N+T+
Sbjct: 2722 NDRLDGGAGADKLIGGAGNDTYFIDNSSDTITENASEGTDAVNSSITYTLGANLENLTLV 2781
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FE 322
+ I + G++ N+V+IGNS N +GND DG +G DT A + Y + R +
Sbjct: 2782 GTSAI-NGTGNTLNNVLIGNSVVNSLSGGTGNDTLDGGAGADTLTGGAGNDTYLLGRGYG 2840
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQ 349
N IIV + ++ DQ
Sbjct: 2841 NDIIVENDATSGNTDVAQFNAGIATDQ 2867
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 11/170 (6%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D + + + V + D+ + G + + A VI G GND + G
Sbjct: 1855 HDGHAVEEIRIPADNLVYSIADIRQLVLQATDGDDSLIGYAGDDVI---SGLGGNDFIAG 1911
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-------KQ 335
N+ GND+ DG +G D Y + + +I +
Sbjct: 1912 RGGNDTLTGGLGNDILDGGTGADVMDGGLGDDTYSVDSAADQVIEAVDGGNDSVETGITH 1971
Query: 336 DFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
S++E L ++ Q ++L + L +G D E
Sbjct: 1972 TLASNLENLILTGAADVNGFGNDQDNVLTGNSGNNILDGGLGTDTMEGGA 2021
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 7/167 (4%)
Query: 203 GNNIYKIEVQQKDSP--FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + I + G+D++D GG N + + +
Sbjct: 490 DDEIYGGSGDDQLQGNLGIDYLDGGEGNDVID----GGDDNDQLFGGDGDDWLQAGSGDD 545
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + ++++G +G D + G NN +GND +G SG D
Sbjct: 546 YLDGESGNDTLLGGAGADQIFGGEGNNNLQGDAGNDYLEGGSGNDLILGGDGDDTIVGGD 605
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
EN + N+ + S V+ + +D L A
Sbjct: 606 GENRLEGGGGNDTIEGG-SGVDIILGSDGADTIYGNGGDDQLHGDAG 651
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 61/181 (33%), Gaps = 8/181 (4%)
Query: 222 IYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ + GDD LD TL GG N L + I G N I + +++G G
Sbjct: 430 LHGNAGDDYLDGEAGNNTLFGGDGNDTLLGGDGNDQIQGDAGNDYIDGGSGTNTLIGGDG 489
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + G S ++ + G D DG G D + + + + + D
Sbjct: 490 DDEIYGGSGDDQLQGNLGIDYLDGGEGNDVIDGGDDNDQL-FGGDGDDWLQAGSGDDYLD 548
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEG 394
S + L + + L+ A + L G D+ G E
Sbjct: 549 GESGNDTLLGGAGADQIFGGEGNNNLQGDAGNDYLEGGSGNDLILGGDGDDTIVGGDGEN 608
Query: 395 R 395
R
Sbjct: 609 R 609
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 9/135 (6%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
GY TI+ +++ G GND++ +++ +G+D+ G +G DT+ + S
Sbjct: 1737 GYATADTISGFGGNDAIYGLGGNDILSSGDGDDILTGGAGDDILSGDAGSDTYLFSPGSG 1796
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
IY F DA+ K D L E LR AD I N + S + +
Sbjct: 1797 RDTIYNF-------DASSGKTDALVLGEGLRAADIDISRTNDDLTIAI--LNSNDQVTIA 1847
Query: 375 IGQDVFESMKHFYEF 389
H E
Sbjct: 1848 NYFSGDGHDGHAVEE 1862
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND + GNS N+ +G+D +G +G DT+ + + I + D
Sbjct: 1597 IQGLAGNDALFGNSGNDTLVGGAGDDALNGGAGSDTYLFGRGAGHDVINNY-------DT 1649
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
K D L + L D I + ++ D + ++
Sbjct: 1650 GAGKTDALVLADDLHATDIDIRRSDSNSDDLVLTIRDSGDQVTIVN 1695
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 47/347 (13%), Positives = 98/347 (28%), Gaps = 28/347 (8%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
++ F+E + + + N D G+
Sbjct: 254 TNVVFQEATAGGADNIYAGTGDDFVY-----AGGGDDNIDAGTGNDIVYGEDGNDFITGG 308
Query: 126 HE----IGHALGLM---HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF- 177
+ +G + L H Y G + L S +
Sbjct: 309 ADDDVLVGDSDWLAANLHGNDYIDGGDGNDKIAGLGGNDVLFGG-SGNDELQGGAGDDYL 367
Query: 178 -GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----- 231
G + +++G ++ ++ I+ G D L
Sbjct: 368 DGEAGDDQLFGEGGNDQLFGGDGNDYLDDTEGDNYLDGEA-GNDEIWGGSGIDQLMGGDG 426
Query: 232 -DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D +Y+D + +++ G + N T+ + + G +GND + G S N
Sbjct: 427 DDELHGNAGDDYLDGEAGN-NTLFGGDGNDTLLGGDGNDQIQGDAGNDYIDGGSGTNTLI 485
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
G+D G SG D + + E ++ +++ Q F D + A
Sbjct: 486 GGDGDDEIYGGSGDDQLQGNLG--IDYLDGGEGNDVIDGGDDNDQLFGGDGDDWLQAGSG 543
Query: 351 IDSVNVKQRSILEYTASYEDLI---QVIGQDVFESMKHFYEFGLSEG 394
D ++ + + + D I + ++ + E G
Sbjct: 544 DDYLDGESGNDTLLGGAGADQIFGGEGNNNLQGDAGNDYLEGGSGND 590
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 18/193 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G + D + D G GDD ++ I+ S+
Sbjct: 1913 GGNDTLTG----GLGNDILDGGTGADVMDGGLGDDTY--SVDSAADQVIEAVDGGNDSVE 1966
Query: 255 GYEKNMT-------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I + G+ ++V+ GNS NN+ G D +G +G DT
Sbjct: 1967 TGITHTLASNLENLILTGAADVNGFGNDQDNVLTGNSGNNILDGGLGTDTMEGGAGNDT- 2025
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFL--SDVERLRFADQCIDSVNVKQRSILEYT 365
YY + +I A I + ++L ++VE L I + +++
Sbjct: 2026 -YYTDTLGDRIVEQNGAGIDTEIRGFDTNYLLTANVENLTLTGSAIYGNGNELDNVITGN 2084
Query: 366 ASYEDLIQVIGQD 378
+ +L G D
Sbjct: 2085 EADNNLWGAEGND 2097
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 33/179 (18%)
Query: 195 YGAPKG---SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------DLTLIGGVKN- 241
YG G++ Y + T +SG ++ L DL + +
Sbjct: 672 YGGNDTLVGGAGDDTYVFNLGDGVDTIQDTAGESGIENTLYFGAGITKDDLAFVWQTDSL 731
Query: 242 YIDLNTESWS--------------------SIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I++ T + +N+ I + G+SG+D ++
Sbjct: 732 RINVGTGGDAIILSNCTQNDPTGALPVYSLEFADGSQNLLINFLYAGITQTGTSGDDTMV 791
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + + GND DG +G DT + + + + D ++ + +
Sbjct: 792 GAAGCDTLNGGDGNDTLDGGTGHDTLDGGVGNDVLSGGAGNDILTGGDGDDLLAGGIGN 850
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 24/62 (38%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G + ++ +GND +G +G DT+ + I +
Sbjct: 1309 GLAGNDALYGGTGDDTLDGGAGNDTTNGGTGNDTYLFNLGDGQDTISEGGGTLDTIRFGA 1368
Query: 333 HK 334
Sbjct: 1369 GI 1370
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 10/161 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y I+ + + + TL ++N + T + + G N
Sbjct: 2736 GGAGNDTYFIDNSSDTITENASEGTDAVNSSITYTLGANLENLTLVGTSAINGTGNTLNN 2795
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I V + + G + N+ +G D G +G DT+ I
Sbjct: 2796 VLIGNSVV----------NSLSGGTGNDTLDGGAGADTLTGGAGNDTYLLGRGYGNDIIV 2845
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ D + +D + ++ +
Sbjct: 2846 ENDATSGNTDVAQFNAGIATDQLWFQHVGTNLEVSIIGTSD 2886
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 57/177 (32%), Gaps = 15/177 (8%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN---DVVIGNS 284
D L ++ ID + + N+ T S + +GN +V+ GN
Sbjct: 2028 TDTLGDRIVEQNGAGIDTEIRGFDTNYLLTANVENLTLTG--SAIYGNGNELDNVITGNE 2085
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDF 337
A+N + + GND G +G D F + ++ +A + DF
Sbjct: 2086 ADNNLWGAEGNDTLIGGAGNDALFGAGGQDVLIGGAGDDYYEVGDAGDLILEAADEGDDF 2145
Query: 338 LSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGL 391
+ +D +V+ L L G ++ + + E G
Sbjct: 2146 VRSTVSYTLSDNIERAAVDGMDDLTLTGNGQDNGLWGNQGNNLLTGGQGNDYVEGGA 2202
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 1/135 (0%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ + + + F +++ DS D + YI + +G +
Sbjct: 1094 NGTGDQV-TLLGWGNNQGFDESVVDSRIDQVTFADGTVWNAAYIWSRLAGGTVVGTNGYD 1152
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
A ++ G +G+D++ GN N++ G D G G DT+ + I
Sbjct: 1153 HLYAWSLENATLQGLAGDDMLEGNKGNDILIGGLGADTMQGGVGNDTYVFNLGDGRDVIT 1212
Query: 320 RFENAIIVYDANEHK 334
++ E
Sbjct: 1213 EGGGSLDTIRFGEGI 1227
Score = 44.7 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 39/123 (31%), Gaps = 13/123 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-----------APSYLYK 317
+ + SGND + G++ N+ F G D+ G G D A
Sbjct: 189 DLLSAGSGNDELYGSNRNDALFGGGGEDLIVGGGGDDAILADYNLTSAQKTWNATVSQNP 248
Query: 318 IYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ +A D + + +A D+++ + + Y D I
Sbjct: 249 YGINFTNVVFQEATAGGADNIYAGTGDDFVYAGGGDDNIDAGTGNDIVYGEDGNDFITGG 308
Query: 376 GQD 378
D
Sbjct: 309 ADD 311
Score = 44.7 bits (104), Expect = 0.050, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 13/126 (10%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGL 304
S + G N + T +++ G +GND G + N+ F G D G
Sbjct: 1301 AGENSILQGLAGNDALYGGTGDDTLDGGAGNDTTNGGTGNDTYLFNLGDGQDTISEGGGT 1360
Query: 305 -DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRFADQCIDS 353
DT + A I + + + D + +ER+ F+ +
Sbjct: 1361 LDTIRFGAGIAPEDISFSRSGYDLMLSINGSSDQVRIKSWSGGEGNRIERVEFSGGTVWD 1420
Query: 354 VNVKQR 359
Q
Sbjct: 1421 AAYIQS 1426
>gi|317152618|ref|YP_004120666.1| outer membrane adhesin like proteiin [Desulfovibrio aespoeensis
Aspo-2]
gi|316942869|gb|ADU61920.1| outer membrane adhesin like proteiin [Desulfovibrio aespoeensis
Aspo-2]
Length = 3450
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 61/175 (34%), Gaps = 19/175 (10%)
Query: 244 DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
DL S + G N T+ + + G SGND + G +A+++ SGND G
Sbjct: 3179 DLAYGGLGSDTLHGGAGNDTLYGGDANDILYGGSGNDSLDGGNADDMISGGSGNDTLLGG 3238
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSDV------------ERL 344
+G D A + + ++ D N +H D LS + L
Sbjct: 3239 NGNDVLVGGAGNDSMDGGTGNDTLLGGDGNDTLLGDHGDDLLSGGAGDDSLDGGTGHDTL 3298
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
D V +L A + + G D+ + + + L G D F
Sbjct: 3299 FGGDGNDTLVGDHGNDLLVGGAGDDLIYGGTGNDMVIAGTGYDQVELGSGNDTIF 3353
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ G+D + TL+GG N L + G + ++
Sbjct: 3232 NDTLLGGNGNDVLVGGAGNDSMDGGTGNDTLLGGDGNDTLLGDHGDDLLSGGAGDDSLDG 3291
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T +++ G GND ++G+ N++ +G+D+ G +G D ++ +
Sbjct: 3292 GTGHDTLFGGDGNDTLVGDHGNDLLVGGAGDDLIYGGTGNDMVIAGTGYDQVELGSGNDT 3351
Query: 325 IIVYDA 330
I + +
Sbjct: 3352 IFIDQS 3357
>gi|187607872|ref|NP_001120324.1| hypothetical protein LOC100145387 [Xenopus (Silurana) tropicalis]
gi|166797027|gb|AAI59193.1| Mmp13 protein [Danio rerio]
gi|170284421|gb|AAI60951.1| LOC100145387 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 68/189 (35%), Gaps = 29/189 (15%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
D W + + Y+ + T L + E++ + AL WS V L F S +D
Sbjct: 110 DYKWKKHQLTYRIENYT---LDMSVAEVD----DSISRALKVWSDVTPLRFTRIYSGTAD 162
Query: 79 IK--FISSNNG------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
I F + ++G P Y+ + +FD + + Y + L A
Sbjct: 163 IMIFFATGDHGDGYPFDGPNGFLAHAYPPYEGVG-GDAHFDDDETFSYRSTQYYTLFSVA 221
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQD--SMMDASFG 178
HE GH+LGL H YP Y +D + + S + P + D+
Sbjct: 222 AHEFGHSLGLGHSRDPGALMYPTYVYRDMDRFILPRDDVNGIQSLYGPNTDVNTDDSKPT 281
Query: 179 YCATPMVSD 187
TP D
Sbjct: 282 PPVTPNTCD 290
>gi|254425468|ref|ZP_05039185.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196187891|gb|EDX82856.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 880
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 47/178 (26%), Gaps = 6/178 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G+D LD L G N I ++ G N T+
Sbjct: 604 NDTLDGGDGNDTLKGGRGNDTLDGRIGQDALFGSNGNDILFGRGGNDTLDGGNGNDTLDG 663
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G G+D + G + N+ G D G SG D A S N
Sbjct: 664 GDSNDLLNGGKGSDTLDGGNGNDTLDGGRGQDALFGGSGDDVLVGGADSDTLD-GGNGND 722
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D L D L + L G D+
Sbjct: 723 TLDGGDGNDTLDGGRGRNALFGGDGNDTLFGGVDNDTLNGGDGNDTLDGGRGSDILTG 780
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 67/211 (31%), Gaps = 21/211 (9%)
Query: 191 VQKIYGAPKGSL------GNNIYKIEVQQKDSPFIQTIYDSGG--DDLLD-----LTLIG 237
+ ++G G+ + + I +GG +D+LD +L G
Sbjct: 487 TRTLFGTNGNDTLVGGRKGDIFFGLAGNDFLFGGINNDVLAGGRGNDILDGGRDKDSLDG 546
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G N I + ++ G N T+ +++ G G D + G + N++ + ND
Sbjct: 547 GDGNDILFGGDGKDTLTGGRGNDTLNGGRGDDTLDGGRGQDALFGGNGNDILIGGADNDT 606
Query: 298 FDGSSGLDTFFYYAPSYLYK--------IYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
DG G DT + N I+ D + + L D
Sbjct: 607 LDGGDGNDTLKGGRGNDTLDGRIGQDALFGSNGNDILFGRGGNDTLDGGNGNDTLDGGDS 666
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
K L+ + L GQD
Sbjct: 667 NDLLNGGKGSDTLDGGNGNDTLDGGRGQDAL 697
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G+D LD L GG + + + ++ G N T+
Sbjct: 667 NDLLNGGKGSDTLDGGNGNDTLDGGRGQDALFGGSGDDVLVGGADSDTLDGGNGNDTLDG 726
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G G + + G N+ F ND +G G DT S + +
Sbjct: 727 GDGNDTLDGGRGRNALFGGDGNDTLFGGVDNDTLNGGDGNDTLDGGRGSDILTGGNGRDV 786
Query: 325 IIVYDANE 332
++ D ++
Sbjct: 787 LLGGDGDD 794
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 5/137 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-----GGYEKNMTIAQ 264
T+ G+D LD D N + + G + N T+
Sbjct: 712 SDTLDGGNGNDTLDGGDGNDTLDGGRGRNALFGGDGNDTLFGGVDNDTLNGGDGNDTLDG 771
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G +G DV++G ++ ND G +G DTF + I F+
Sbjct: 772 GRGSDILTGGNGRDVLLGGDGDDTLIGEGNNDTLTGGNGRDTFVLSVGDGVDTITDFDTK 831
Query: 325 IIVYDANEHKQDFLSDV 341
++ A LS V
Sbjct: 832 DLIGLAGGLGIGDLSFV 848
>gi|119512974|ref|ZP_01632035.1| probable fibrinogen-binding protein-like protein [Nodularia
spumigena CCY9414]
gi|119462387|gb|EAW43363.1| probable fibrinogen-binding protein-like protein [Nodularia
spumigena CCY9414]
Length = 859
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 12/186 (6%)
Query: 200 GSLGN-NIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GS G+ +IY + +Y G+D ++ GG N I +I G
Sbjct: 191 GSTGDYSIYGGAGNDTISGNAGNDRLYGEDGNDTIN----GGGDNDILYGGSGDDTINGG 246
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + +++ G G+D + G++ N++ +G D G SG D A
Sbjct: 247 DGSDYFFGGDGNDTINGGDGDDYLYGDAGNDMLNGDAGYDRLYGGSGNDILNGDAGGDYL 306
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQC--IDSVNVKQRSILEYTASYEDL 371
+ +I N ++D LS +R D + A D
Sbjct: 307 VGGSGNDTLIGGSGNSGERDRLSGGSGSDRFIIGDATWIGYDDGNAATNGNNDYAEIADF 366
Query: 372 IQVIGQ 377
+ G
Sbjct: 367 NEAEGD 372
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 67/227 (29%), Gaps = 38/227 (16%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGY 256
G GN+ + I +Y G+D ++ NY D +
Sbjct: 96 NGGDGNDRLYGDAGNDIIDGIDFLYGDAGNDTINGGSGTDTYAANYSDRLVGLTMTYDSA 155
Query: 257 EKNMTIAQHTV------IES----------------------VVGSSGNDVVIGNSANNV 288
N +I T IE+ + G +GND + GN+ N+
Sbjct: 156 TGNGSIVVGTETDTFTSIENFDSFRGTNFDDIIVGGSTGDYSIYGGAGNDTISGNAGNDR 215
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ GND +G D + + I + + + + + D + + D
Sbjct: 216 LYGEDGNDTINGGGDNDILYGGSGDD--TINGGDGSDYFFGGDGNDTINGGDGDDYLYGD 273
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D +N Y S D++ ++ + G
Sbjct: 274 AGNDMLNGDAGYDRLYGGSGNDIL------NGDAGGDYLVGGSGNDT 314
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 13/118 (11%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI G+D LD + G + TI + + G GND+
Sbjct: 30 DTIDGGSGNDTLDGGSGTDY-------------LYGGSGDDTINGGDGNDYLFGQDGNDI 76
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G ++ SG+D+ +G G D + A + + F D
Sbjct: 77 LNGGGDDDSLHGGSGDDILNGGDGNDRLYGDAGNDIIDGIDFLYGDAGNDTINGGSGT 134
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 16/133 (12%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-- 309
+ G + N I +++ G SGND + G S + + SG+D +G G D F
Sbjct: 13 NFQGTQGNDYITGTDQDDTIDGGSGNDTLDGGSGTDYLYGGSGDDTINGGDGNDYLFGQD 72
Query: 310 -----YAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSDVERLRFADQCIDSVNVK 357
++ I+ + D + ++ + D D++N
Sbjct: 73 GNDILNGGGDDDSLHGGSGDDILNGGDGNDRLYGDAGNDIIDGID-FLYGDAGNDTINGG 131
Query: 358 QRSILEYTASYED 370
+ Y A+Y D
Sbjct: 132 SGTD-TYAANYSD 143
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 10/142 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++ G+ GND + G ++ SGND DG SG D + + + +
Sbjct: 12 QNFQGTQGNDYITGTDQDDTIDGGSGNDTLDGGSGTDYLYGGSGDDTINGGDGNDYLFGQ 71
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D N + L IL + L G D+ + + Y
Sbjct: 72 DGN----------DILNGGGDDDSLHGGSGDDILNGGDGNDRLYGDAGNDIIDGIDFLYG 121
Query: 389 FGLSEGRDITFDSYLYLGSYDD 410
++ + + Y +Y D
Sbjct: 122 DAGNDTINGGSGTDTYAANYSD 143
>gi|302874787|ref|YP_003843420.1| putative calcium binding hemolysin protein [Clostridium
cellulovorans 743B]
gi|302577644|gb|ADL51656.1| putative calcium binding hemolysin protein [Clostridium
cellulovorans 743B]
Length = 769
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 70/190 (36%), Gaps = 15/190 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + Y SGGD + +T G N + + G N ++
Sbjct: 592 DILYGGKGNDIIDGKAGNDYISGGDGVDKITGDVGDDKVYGENGNDY--LYGKTGNDSLY 649
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G GND++ G N+ + G+D+ G G D + +Y +
Sbjct: 650 GGIGEDQLYGDEGNDIIYGEVGNDKLYGGLGDDLLYGGEGTDVIVGGEGNDIYVFAKGNG 709
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFES 382
A + + D V++L F+D + + S +DL I++ G +
Sbjct: 710 ADTIINNTSSNID----VDKLLFSDVSLSETK--------FLKSNKDLKIKINGTSEVIT 757
Query: 383 MKHFYEFGLS 392
+ ++ +G
Sbjct: 758 ISGYFNYGKY 767
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 51/163 (31%), Gaps = 20/163 (12%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ GG+D L GG N I I G N I + G G+D +
Sbjct: 512 TLIGCGGNDYL----YGGKSNDI---------IYGNIGNDHIECGEGADKSYGGVGDDTL 558
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS- 339
G S N+ + G + DG G D + + + + D++S
Sbjct: 559 YGGSGNDSLYGEDGRNYIDGGEGEDILYGGRDIDIL----YGGKGNDIIDGKAGNDYISG 614
Query: 340 --DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V+++ L + L IG+D
Sbjct: 615 GDGVDKITGDVGDDKVYGENGNDYLYGKTGNDSLYGGIGEDQL 657
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ G G+DV+ G ++ GND G G D + + Y
Sbjct: 432 IKGNAKADTLYGGEGDDVIYGGKGDDFIDGKGGNDSIFGEEGADKLYGGLGTDKLYGYDG 491
Query: 322 ENAI 325
+ I
Sbjct: 492 NDYI 495
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G ND++ G+ ++ + G+D+ +G G D + +Y ++ D
Sbjct: 142 ISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGNDVYLFNIGSGKEVIDDY 201
Query: 331 NEHKQDFLSDVERLRFADQ 349
+E D ++ + F ++
Sbjct: 202 DETGSD----IDTILFGEK 216
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G N+V + GND DG G D + Y R I+ D ++ +
Sbjct: 9 LVGTEKNDVLNGNIGNDTLDGGLGNDQLTGGKGNDKYIFNRGYGKDIIIDNDK----TIG 64
Query: 340 DVERLRFADQ 349
+++ + F +
Sbjct: 65 NIDTIVFGEG 74
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I+ + + + GS +D + G +++ GND +G G D + + S
Sbjct: 137 NGTGVISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGNDVYLFNIGSGKE 196
Query: 317 KIYRFENAIIVYDANEHKQ 335
I ++ D +
Sbjct: 197 VIDDYDETGSDIDTILFGE 215
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ NDV+ GN N+ GND G G D + + I + I
Sbjct: 9 LVGTEKNDVLNGNIGNDTLDGGLGNDQLTGGKGNDKYIFNRGYGKDIIIDNDKTI----- 63
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
D + E + ++ + ++ T
Sbjct: 64 --GNIDTIVFGEGISASELQFYKSGNNLKILIRDTED 98
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 34/201 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----------------GY 256
K + T+Y GDD++ G ++ID + S G GY
Sbjct: 433 KGNAKADTLYGGEGDDVI---YGGKGDDFIDGKGGNDSIFGEEGADKLYGGLGTDKLYGY 489
Query: 257 EKNMTI---------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ N I ++++G GND + G +N++ + + GND + G D
Sbjct: 490 DGNDYIDGGEGDDNIDGGDGQDTLIGCGGNDYLYGGKSNDIIYGNIGNDHIECGEGADKS 549
Query: 308 FYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ +++ D +D L + + + ++
Sbjct: 550 YGGVGDDTLYGGSGNDSLYGEDGRNYIDGGEGEDILYGGRDIDILYGGKGNDIIDGKAGN 609
Query: 363 EYTASYEDLIQVIGQDVFESM 383
+Y + + + ++ G + +
Sbjct: 610 DYISGGDGVDKITGDVGDDKV 630
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G ND++ G+ ++ + + G D+ +G G D + Y + + D
Sbjct: 284 VTGYESNDIITGSDLDDKIYGNGGKDILNGLRGNDYLNGGIGNDTYILGLDSGEKTIEDY 343
Query: 331 NEHKQDFLSDVERLRF 346
+E +++ ++F
Sbjct: 344 DE----TEGNIDTIKF 355
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + GS +D + GN ++ GND +G G DT+ S I ++
Sbjct: 291 DIITGSDLDDKIYGNGGKDILNGLRGNDYLNGGIGNDTYILGLDSGEKTIEDYDETEGNI 350
Query: 329 DANEHKQDFLSDVERLRF 346
D + +Q + E + F
Sbjct: 351 DTIKFEQGI--NPEDISF 366
Score = 38.2 bits (87), Expect = 4.7, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 25/120 (20%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGND--VFDGSSGL-------------DTFFYYAPS 313
+ + G+ GND + G N+ GND +F+ G DT +
Sbjct: 16 DVLNGNIGNDTLDGGLGNDQLTGGKGNDKYIFNRGYGKDIIIDNDKTIGNIDTIVFGEGI 75
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRFADQCIDSVNVKQRSILE 363
++ +++ + +D ++ +E + F+D I +
Sbjct: 76 SASELQFYKSGNNLKILIRDTEDSITISNYYYQDSYKIEEICFSDGTIWDQKTISIQPIH 135
Score = 37.8 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 25/136 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGL------ 304
I GYE N I + + G G+D++ G N+ GNDV F+ SG
Sbjct: 142 ISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGNDVYLFNIGSGKEVIDDY 201
Query: 305 -------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----------SDVERLRFA 347
DT + + N + +D + + +E+++F+
Sbjct: 202 DETGSDIDTILFGEKINPIDLQFSRNENNLKIIIRGTEDSIEILNYYNNLNNKIEKIQFS 261
Query: 348 DQCIDSVNVKQRSILE 363
D I +
Sbjct: 262 DGTIWDQKTIDSQPIY 277
>gi|47202237|emb|CAF87535.1| unnamed protein product [Tetraodon nigroviridis]
Length = 279
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 64/209 (30%), Gaps = 52/209 (24%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
++ ++ W ++ + + ++ E R A W V+ LTF
Sbjct: 97 DKCITQII----WRSFLVHPSFYFSSASIENYTPKVGKQATYEAIRKAFKVWESVIPLTF 152
Query: 71 EE---------TSIHSDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKAD 108
E ++DI G++ + + +FD A+
Sbjct: 153 REIPYSQIKNKVDRYADIMLSFAEGFHGDSSPFDGEGGFLAHAFFPGNGIGGDTHFDLAE 212
Query: 109 VWRYGIGKG-TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
W G +G + A+HE+GHALGL H + +M+ F
Sbjct: 213 PWTVGPDQGGNDVFLVAVHELGHALGLEHSNDPSA-------------------IMAPFY 253
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ D +Q IYG
Sbjct: 254 QWFETENFQ------LPDDDRRGIQAIYG 276
>gi|291566643|dbj|BAI88915.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 288
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 17/156 (10%)
Query: 197 APKGSLGNN----IYKIEVQQK--DSPFIQTIYDSGGDDLL------DLTLIGGVKNYID 244
A + G+N IY +Y + G+D + +L G + I
Sbjct: 46 ADTLTAGDNPNMVIYGFSGNDSIVGGEGGNELYGNQGNDTIYGIAGNNLIYGGQGDDLIY 105
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ SS+ G + N T+ + + + G G+D++IG N++ F GND G G
Sbjct: 106 GGDGN-SSLSGDKGNDTLVGGSGNDIMRGGDGDDLLIGGDGNDLLFGEKGNDTLQGGPGN 164
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
DT + L + + A + D L+
Sbjct: 165 DTMYGGQGDDLIQ----GGDGNDFLAGDKGNDTLTG 196
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 61/169 (36%), Gaps = 19/169 (11%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGD-----DLLDLTLIGGVKNYI-- 243
++YG + IY I IY G+ D + TL+GG N I
Sbjct: 76 ELYGNQGN---DTIYGIAGNNLIYGGQGDDLIYGGDGNSSLSGDKGNDTLVGGSGNDIMR 132
Query: 244 -----DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
DL + + G + N T+ +++ G G+D++ G N+ GND
Sbjct: 133 GGDGDDLLIGGDGNDLLFGEKGNDTLQGGPGNDTMYGGQGDDLIQGGDGNDFLAGDKGND 192
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
G +G DTF A L + + D + +++ +
Sbjct: 193 TLTGGAGADTFALTANPNLSRDVITDFNSAEGDVIALRAGAGYNLDSFQ 241
>gi|332162407|ref|YP_004298984.1| putative RTX-family protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666637|gb|ADZ43281.1| putative RTX-family protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 2108
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 28/184 (15%)
Query: 222 IYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+Y GDD++ DL+ G I G N I + G GND +
Sbjct: 1900 LYAKHGDDVISDLSGRGHK-------------IYGDVGNDIIYAKGGNNMLSGGDGNDEL 1946
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + N++ + G+D+ + G++ F Y I++D
Sbjct: 1947 FGGNGNDLLYGGQGDDILNSGDGINVFAGEEGDDSYVFEPGHGDNIIFDNKGRNSIIFKG 2006
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
++ + + + S + + +F GR TF
Sbjct: 2007 IDY-----RVLQFKKQDSNLTININNSNKAVTIA---------NYFVVGAEQRGRLFTFK 2052
Query: 401 SYLY 404
+ Y
Sbjct: 2053 TDEY 2056
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 10/112 (8%)
Query: 268 IESVVG-SSGNDVVIGNSANNVFFESSGN--DVFDGSSGLD-------TFFYYAPSYLYK 317
IE+ G D++IGN NV G D +G G D T Y
Sbjct: 1505 IENAYGQKDKKDLLIGNDNVNVLNGGGGYTEDRLEGGGGNDILTLLRGTAVGGEGIDTYI 1564
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + E QD +S ++ +D+ ++ + Y
Sbjct: 1565 ISSASYSAAHVVIYEDAQDEVSIIQLQAKSDRIESIELKNNDIVIRFIDDYN 1616
>gi|163747732|ref|ZP_02155075.1| hypothetical protein OIHEL45_16931 [Oceanibulbus indolifex HEL-45]
gi|161378995|gb|EDQ03421.1| hypothetical protein OIHEL45_16931 [Oceanibulbus indolifex HEL-45]
Length = 585
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 7/125 (5%)
Query: 228 DDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D + + G + I I G N T+ + + +VG S ND + G
Sbjct: 420 NDTMKGSSIEDHMFGYGGDDILKGEGGDDFISGMRGNDTLYGGSGDDRMVGLSDNDQLFG 479
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N++ GND DG +G D + + + ++ + D L D+E
Sbjct: 480 EEGNDLLRGGEGNDRLDGGAGNDRLYGGKGNDTFIFWQGSGQDRINDFQIGAD--LIDLE 537
Query: 343 RLRFA 347
L +
Sbjct: 538 SLGLS 542
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G +N T+ ++ + + G G+D++ G ++ GND G SG D + +
Sbjct: 416 GTMQNDTMKGSSIEDHMFGYGGDDILKGEGGDDFISGMRGNDTLYGGSGDDRMVGLSDND 475
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N ++ + D + +RL
Sbjct: 476 QL-FGEEGNDLLRGGEGNDRLDGGAGNDRL 504
Score = 38.6 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ ND + G+S + F G+D+ G G D F N + + +
Sbjct: 416 GTMQNDTMKGSSIEDHMFGYGGDDILKGEGGDD-FISGMR---------GNDTLYGGSGD 465
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ LSD ++L + + L+ A + L G D
Sbjct: 466 DRMVGLSDNDQLFGEEGNDLLRGGEGNDRLDGGAGNDRLYGGKGND 511
>gi|110681127|ref|YP_684134.1| iron-regulated protein frpC, putative [Roseobacter denitrificans
OCh 114]
gi|109457243|gb|ABG33448.1| iron-regulated protein frpC, putative [Roseobacter denitrificans
OCh 114]
Length = 548
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G DLLDL+ +DL + + G + I E+V G+ ND +IGN
Sbjct: 399 GDGVDLLDLS-DAASAVTVDLAAGTITD--GANTSTAINF----ENVTGTDFNDTIIGND 451
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+NV +GNDV G +G DTF ++ I
Sbjct: 452 QDNVIRGGAGNDVMSGGAGADTFVFFEEDAGVDI 485
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 1/127 (0%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I + ++GS GND + GN +++ F GND G G D F A +
Sbjct: 10 FSNGLDIKGSNKSDLIIGSFGNDKIAGNGGDDLMFGLFGNDKMSGGLGDDRIFAGAGRDI 69
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQV 374
+ E+A+ + N+ + + + + N ++ + Y+ +
Sbjct: 70 VEGGEGEDALYGNNGNDVIVGNRGNDKMFGGSGNDKLVWNNGDGSDLMNGGSGYDKVQVN 129
Query: 375 IGQDVFE 381
D+ +
Sbjct: 130 FDTDLVD 136
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 10/125 (8%)
Query: 224 DSGGDDLLDLTLIGGVKNYI------DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSS 275
D G + DL + + I DL + + + G + I + V G
Sbjct: 15 DIKGSNKSDLIIGSFGNDKIAGNGGDDLMFGLFGNDKMSGGLGDDRIFAGAGRDIVEGGE 74
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G D + GN+ N+V + GND G SG D + + +
Sbjct: 75 GEDALYGNNGNDVIVGNRGNDKMFGGSGNDKLVWNNGDGSDLM--NGGSGYDKVQVNFDT 132
Query: 336 DFLSD 340
D + D
Sbjct: 133 DLVDD 137
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 43/136 (31%), Gaps = 21/136 (15%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ G D LDL+ + +DL + E+V+G+
Sbjct: 200 KIALDLDGGDGIDTLDLSQV-DSGIKVDLAAGKLAHSKAEN----------FENVIGTEY 248
Query: 277 NDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
D++ G++ +NV +GND G+ G D F L I+ + +
Sbjct: 249 QDLLRGDAQDNVISGLGGDDQLGGRAGNDTLIGNKGNDKVFGGDGDDLL-IWNNGDGSDL 307
Query: 328 YDANEHKQDFLSDVER 343
+ +
Sbjct: 308 MHGGNGYDRLQVNFDT 323
>gi|85703937|ref|ZP_01035040.1| calcium binding hemolysin protein, putative [Roseovarius sp. 217]
gi|85671257|gb|EAQ26115.1| calcium binding hemolysin protein, putative [Roseovarius sp. 217]
Length = 1708
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 8/153 (5%)
Query: 199 KGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G G++I + + G+D L D ++ G N +
Sbjct: 1487 NGGDGDDIMGAGFGDDSVVGAAGNDVVAGGAGNDTLSGGSGDDSMSGSFGNDLINAGGGA 1546
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
IGG TI + V G+D V G N+ ND DG +G DT
Sbjct: 1547 DDIGGGAGQDTIDAGAGNDRVGAGEGDDSVFGGDGNDFLAGGGRNDTIDGGAGNDTINAG 1606
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
A + + + + E + D ++D E
Sbjct: 1607 AGNDVITGGTGADQFVFASFFEGEADVVTDFED 1639
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 16/153 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNM--T 261
+ ++ G D LD +Y S + G N+
Sbjct: 1018 NDTLEGGAGDDLLHGGAGSDSLDGGADSDTASYAWARPGSLTGAIIADTFGAVSVNLETG 1077
Query: 262 IAQHT-------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
IA IE+V+G+ ND+++GN +N+ +GND +G G D +
Sbjct: 1078 IATGAFGSDTLISIENVIGTGANDILLGNELDNMLSGGAGNDNLEGLGGDDVLITGSGDD 1137
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
++ ++V N++ S + L F
Sbjct: 1138 TVSAGAGDDTVVVGLGNKNLNGG-SGFDTLDFG 1169
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 68/209 (32%), Gaps = 15/209 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G + + P Q + + G+D + D TLIG N L
Sbjct: 1379 GIESFRFTDATLTLAQVLALPPVGQQVTGTAGNDTINGDAGDDTLIGQGGNDSILGLGGD 1438
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T++ +S+ G+ G+DVV G + N+ GND +G G D
Sbjct: 1439 DGVFGEAGNDTLSGGDGNDSIAGADGDDVVNGGAGNDNIGGGFGNDTINGGDGDDIM--G 1496
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + +V A D LS ++ +D
Sbjct: 1497 AGFGDDSVVGAAGNDVV--AGGAGNDTLSG------GSGDDSMSGSFGNDLINAGGGADD 1548
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ GQD ++ G EG D F
Sbjct: 1549 IGGGAGQDTIDAGAGNDRVGAGEGDDSVF 1577
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 11/148 (7%)
Query: 244 DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
DL S S I G N T+ + + G +GND + G + +++ +G+D DG
Sbjct: 983 DLIDGSAQSEQILGRGGNDTLRGAGGNDKLFGGNGNDTLEGGAGDDLLHGGAGSDSLDGG 1042
Query: 302 SGLDTFFYY----APSYLYKIYRFENAIIV-----YDANEHKQDFLSDVERLRFADQCID 352
+ DT Y I A+ V D L +E +
Sbjct: 1043 ADSDTASYAWARPGSLTGAIIADTFGAVSVNLETGIATGAFGSDTLISIENVIGTGANDI 1102
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + ++L A ++L + G DV
Sbjct: 1103 LLGNELDNMLSGGAGNDNLEGLGGDDVL 1130
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 14/187 (7%)
Query: 218 FIQTIYDSGGD----DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ I D+ G D ++ GGV DL W G + + + +
Sbjct: 286 LLEYIVDALGTIPLLDTVESAFFGGVVGEADLGPTGW----GNDVGNVLVGDDGDDILDA 341
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-ENAIIVYDANE 332
GND ++G N+V +G+D+ +G +G D F++ A Y++ R + I+
Sbjct: 342 LDGNDTILGGGGNDVIIAGAGSDLLNGGAGDDLFYFGASFTEYELLRDPDTGDIIVSHLA 401
Query: 333 HKQDFLSDVERLRFADQC----IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + ++ L D ++ + L G + + F
Sbjct: 402 PQTAVNTGIDTLVALDDGDHVVFTDISFTGAELNNARIGGSVLNGDQGGVPTDDL-LFLN 460
Query: 389 FGLSEGR 395
E R
Sbjct: 461 SSRPENR 467
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 14/165 (8%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD- 329
G G+D + G+ + G+DV G D + +++ R N+ + D
Sbjct: 474 ANGLLGDDRIFGSIEADQLNGGPGDDVLVPGRGDDQANGGTGTDTFQVLRGANSRLRVDL 533
Query: 330 ----ANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ QD LS VE + + DQ + + + + G D ++
Sbjct: 534 INGTSFGQGQDTLSSVENVVASPDQDHTVRGTDGANAIYTGDGVDIITGRAGNDTIDAGG 593
Query: 385 --HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ G G D+ D+ + + HYI
Sbjct: 594 DDDYIIGGA--GADVINAG----AGGIDVMVSGSAAVAGISDHYI 632
Score = 43.6 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 33/123 (26%), Gaps = 12/123 (9%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTE-----------SWSSIGGYEKNMTIAQHTVIESVV-GS 274
G D + + +DL S ++ + T + +
Sbjct: 515 GTDTFQVLRGANSRLRVDLINGTSFGQGQDTLSSVENVVASPDQDHTVRGTDGANAIYTG 574
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G D++ G + N+ +D G +G D A + + D
Sbjct: 575 DGVDIITGRAGNDTIDAGGDDDYIIGGAGADVINAGAGGIDVMVSGSAAVAGISDHYIGG 634
Query: 335 QDF 337
F
Sbjct: 635 DGF 637
>gi|254425783|ref|ZP_05039500.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196188206|gb|EDX83171.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 759
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 81/245 (33%), Gaps = 16/245 (6%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
GS G P++ + N N+ FL S S S S D + +
Sbjct: 422 GSDEGFAPIFELSNLDGNNGFLLS--SINKGDFSGRSVSGAGDVNGDGFDDLIIGSPGAD 479
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
P GS Y + +PF + + + GDD L +GG I + G
Sbjct: 480 PSGSRSGESYVVFGAADITPFARPRFGTNGDDTL----LGGRDKDI---------LFGLA 526
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N ++ +++ G S ND + G N++ GND+ DG G D F + S
Sbjct: 527 GNDFLSGGNGNDTLFGGSDNDTLDGGKGNDLLDGGKGNDLLDGGRGSDFLFGGSGSDTL- 585
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
R +N + D + L IL A + L G
Sbjct: 586 FGRADNDTLDGSHGNDTLDGGRGNDTLDGGRGSDVLFGNDGNDILFGEADNDTLDGGKGN 645
Query: 378 DVFES 382
D +
Sbjct: 646 DTLDG 650
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 5/119 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
S T+ G+D LD L G N I ++ G + N T+
Sbjct: 591 NDTLDGSHGNDTLDGGRGNDTLDGGRGSDVLFGNDGNDILFGEADNDTLDGGKGNDTLDG 650
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G DV++G ++ ND+ G SG DTF + I F+
Sbjct: 651 GGGNDLLTGGDGRDVLLGGDGDDTLIGGGNNDMLTGGSGRDTFVLSLDDGVDTITDFDT 709
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 13/113 (11%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T++ +D LD + + G N T+ + + G+ GND+
Sbjct: 583 DTLFGRADNDTLDGSHGNDT-------------LDGGRGNDTLDGGRGSDVLFGNDGNDI 629
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G + N+ GND DG G D + ++ +I N+
Sbjct: 630 LFGEADNDTLDGGKGNDTLDGGGGNDLLTGGDGRDVLLGGDGDDTLIGGGNND 682
>gi|62897673|dbj|BAD96776.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 405
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 64/208 (30%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ V A WS V
Sbjct: 30 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHVIEKAFQLWSNVTP 82
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF + S +DI N+ + + F + +FD+ + W
Sbjct: 83 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN 142
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 143 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 174
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F +DI +Q IYG +
Sbjct: 175 SYTFSGDVQLAQNDIDGIQAIYGRSQNP 202
>gi|307690596|ref|ZP_07633042.1| putative calcium binding hemolysin protein [Clostridium
cellulovorans 743B]
Length = 766
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 70/190 (36%), Gaps = 15/190 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + Y SGGD + +T G N + + G N ++
Sbjct: 589 DILYGGKGNDIIDGKAGNDYISGGDGVDKITGDVGDDKVYGENGNDY--LYGKTGNDSLY 646
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G GND++ G N+ + G+D+ G G D + +Y +
Sbjct: 647 GGIGEDQLYGDEGNDIIYGEVGNDKLYGGLGDDLLYGGEGTDVIVGGEGNDIYVFAKGNG 706
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFES 382
A + + D V++L F+D + + S +DL I++ G +
Sbjct: 707 ADTIINNTSSNID----VDKLLFSDVSLSETK--------FLKSNKDLKIKINGTSEVIT 754
Query: 383 MKHFYEFGLS 392
+ ++ +G
Sbjct: 755 ISGYFNYGKY 764
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 51/163 (31%), Gaps = 20/163 (12%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ GG+D L GG N I I G N I + G G+D +
Sbjct: 509 TLIGCGGNDYL----YGGKSNDI---------IYGNIGNDHIECGEGADKSYGGVGDDTL 555
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS- 339
G S N+ + G + DG G D + + + + D++S
Sbjct: 556 YGGSGNDSLYGEDGRNYIDGGEGEDILYGGRDIDIL----YGGKGNDIIDGKAGNDYISG 611
Query: 340 --DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V+++ L + L IG+D
Sbjct: 612 GDGVDKITGDVGDDKVYGENGNDYLYGKTGNDSLYGGIGEDQL 654
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ G G+DV+ G ++ GND G G D + + Y
Sbjct: 429 IKGNAKADTLYGGEGDDVIYGGKGDDFIDGKGGNDSIFGEEGADKLYGGLGTDKLYGYDG 488
Query: 322 ENAI 325
+ I
Sbjct: 489 NDYI 492
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G ND++ G+ ++ + G+D+ +G G D + +Y ++ D
Sbjct: 139 ISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGNDVYLFNIGSGKEVIDDY 198
Query: 331 NEHKQDFLSDVERLRFADQ 349
+E D ++ + F ++
Sbjct: 199 DETGSD----IDTILFGEK 213
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G N+V + GND DG G D + Y R I+ D ++ +
Sbjct: 6 LVGTEKNDVLNGNIGNDTLDGGLGNDQLTGGKGNDKYIFNRGYGKDIIIDNDK----TIG 61
Query: 340 DVERLRFADQ 349
+++ + F +
Sbjct: 62 NIDTIVFGEG 71
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I+ + + + GS +D + G +++ GND +G G D + + S
Sbjct: 134 NGTGVISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGNDVYLFNIGSGKE 193
Query: 317 KIYRFENAIIVYDANEHKQ 335
I ++ D +
Sbjct: 194 VIDDYDETGSDIDTILFGE 212
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ NDV+ GN N+ GND G G D + + I + I
Sbjct: 6 LVGTEKNDVLNGNIGNDTLDGGLGNDQLTGGKGNDKYIFNRGYGKDIIIDNDKTI----- 60
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
D + E + ++ + ++ T
Sbjct: 61 --GNIDTIVFGEGISASELQFYKSGNNLKILIRDTED 95
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G ND++ G+ ++ + + G D+ +G G D + Y + + D
Sbjct: 281 VTGYESNDIITGSDLDDKIYGNGGKDILNGLRGNDYLNGGIGNDTYILGLDSGEKTIEDY 340
Query: 331 NEHKQDFLSDVERLRF 346
+E +++ ++F
Sbjct: 341 DE----TEGNIDTIKF 352
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 34/201 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----------------GY 256
K + T+Y GDD++ G ++ID + S G GY
Sbjct: 430 KGNAKADTLYGGEGDDVI---YGGKGDDFIDGKGGNDSIFGEEGADKLYGGLGTDKLYGY 486
Query: 257 EKNMTI---------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ N I ++++G GND + G +N++ + + GND + G D
Sbjct: 487 DGNDYIDGGEGDDNIDGGDGQDTLIGCGGNDYLYGGKSNDIIYGNIGNDHIECGEGADKS 546
Query: 308 FYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ +++ D +D L + + + ++
Sbjct: 547 YGGVGDDTLYGGSGNDSLYGEDGRNYIDGGEGEDILYGGRDIDILYGGKGNDIIDGKAGN 606
Query: 363 EYTASYEDLIQVIGQDVFESM 383
+Y + + + ++ G + +
Sbjct: 607 DYISGGDGVDKITGDVGDDKV 627
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + GS +D + GN ++ GND +G G DT+ S I ++
Sbjct: 288 DIITGSDLDDKIYGNGGKDILNGLRGNDYLNGGIGNDTYILGLDSGEKTIEDYDETEGNI 347
Query: 329 DANEHKQDFLSDVERLRF 346
D + +Q + E + F
Sbjct: 348 DTIKFEQGI--NPEDISF 363
Score = 38.2 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 25/120 (20%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGND--VFDGSSGL-------------DTFFYYAPS 313
+ + G+ GND + G N+ GND +F+ G DT +
Sbjct: 13 DVLNGNIGNDTLDGGLGNDQLTGGKGNDKYIFNRGYGKDIIIDNDKTIGNIDTIVFGEGI 72
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRFADQCIDSVNVKQRSILE 363
++ +++ + +D ++ +E + F+D I +
Sbjct: 73 SASELQFYKSGNNLKILIRDTEDSITISNYYYQDSYKIEEICFSDGTIWDQKTISIQPIH 132
Score = 37.8 bits (86), Expect = 6.6, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 25/136 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGL------ 304
I GYE N I + + G G+D++ G N+ GNDV F+ SG
Sbjct: 139 ISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGNDVYLFNIGSGKEVIDDY 198
Query: 305 -------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----------SDVERLRFA 347
DT + + N + +D + + +E+++F+
Sbjct: 199 DETGSDIDTILFGEKINPIDLQFSRNENNLKIIIRGTEDSIEILNYYNNLNNKIEKIQFS 258
Query: 348 DQCIDSVNVKQRSILE 363
D I +
Sbjct: 259 DGTIWDQKTIDSQPIY 274
>gi|126734969|ref|ZP_01750715.1| Hemolysin-type calcium-binding region [Roseobacter sp. CCS2]
gi|126715524|gb|EBA12389.1| Hemolysin-type calcium-binding region [Roseobacter sp. CCS2]
Length = 890
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 4/113 (3%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G +D++D GG N I I G N I T + + G G+D + G +
Sbjct: 450 GSNDIID----GGAGNDIIYGDRGDDDIEGGSGNDDIDGGTGNDEIEGGIGDDSIDGGAG 505
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
++V +G D +G SG D A + + D + +
Sbjct: 506 DDVLDGGAGVDTVEGGSGDDEIRISAGTDTISGGAGTDTFTAEDGTSLTGETI 558
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 3/154 (1%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D T+ + +DL+ + I TI + V SGND V G N+
Sbjct: 151 DETVSEATPSGLDLSGDDL--IIAGAGEDTINAGGGADEVDAGSGNDTVEGGDGNDQIVG 208
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
++G+D +G G D + + A + D V +
Sbjct: 209 NAGSDTLNGGDGDDIIRGDSVPQSSDFASLPDPSGDGSAIDDGDDLSGGV-SYTSGGVQV 267
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D + + D G + + +
Sbjct: 268 DITFEDDGQSTGFDYNNSDAQNSSGLNDGQDVSD 301
>gi|254454453|ref|ZP_05067890.1| hypothetical protein OA238_5083 [Octadecabacter antarcticus 238]
gi|198268859|gb|EDY93129.1| hypothetical protein OA238_5083 [Octadecabacter antarcticus 238]
Length = 572
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 57/193 (29%), Gaps = 16/193 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVI 268
+ GG+D L +GG LN + + G N +
Sbjct: 370 SDSIDGGQGADNLSGGGGNDTL--YGLGGDDQ---LNGGLGFDDMYGGSGNDVMIGLNGF 424
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFE 322
+++ G SG+D + GN+ N+ F G D+ +G G D + I
Sbjct: 425 DTLYGGSGDDNLKGNAGNDTLFGGDGADILNGGQGADVMHGDGDNDTIIGLGGADILYGG 484
Query: 323 NAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N D + ++ D ++ ++ L IG D
Sbjct: 485 TGDDNLSGNAANDTVYGDGGNDVIQGGQGADDLFGGDGDDVISGADGFDTLFGGIGDDEL 544
Query: 381 ESMK--HFYEFGL 391
F GL
Sbjct: 545 NGNAGNDFINGGL 557
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 13/98 (13%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + T+Y GG+D++ G + + I+ +
Sbjct: 487 DDNLSGNAANDTVYGDGGNDVIQGGQGADDL-------------FGGDGDDVISGADGFD 533
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G G+D + GN+ N+ G+D+ G +G DTF
Sbjct: 534 TLFGGIGDDELNGNAGNDFINGGLGDDLLRGGTGADTF 571
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 47/146 (32%), Gaps = 36/146 (24%)
Query: 204 NNIYKIEVQQKDS--PFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+++Y T+Y GDD L + TL GG I LN + +
Sbjct: 407 DDMYGGSGNDVMIGLNGFDTLYGGSGDDNLKGNAGNDTLFGGDGADI-LNGGQGADVMHG 465
Query: 257 EK-NMTI---------AQHTVIESVVGSSGNDVVIGNSANNVFFES-------------- 292
+ N TI T +++ G++ ND V G+ N+V
Sbjct: 466 DGDNDTIIGLGGADILYGGTGDDNLSGNAANDTVYGDGGNDVIQGGQGADDLFGGDGDDV 525
Query: 293 ----SGNDVFDGSSGLDTFFYYAPSY 314
G D G G D A +
Sbjct: 526 ISGADGFDTLFGGIGDDELNGNAGND 551
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 29/149 (19%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNTESWSSIG 254
+ +Y + T++ G D+L+ + G I L +
Sbjct: 425 DTLYGGSGDDNLKGNAGNDTLFGGDGADILNGGQGADVMHGDGDNDTIIGLGGADI--LY 482
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGN------------------SANNVFFESSGND 296
G + ++ + ++V G GNDV+ G + F G+D
Sbjct: 483 GGTGDDNLSGNAANDTVYGDGGNDVIQGGQGADDLFGGDGDDVISGADGFDTLFGGIGDD 542
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+G++G D L + +
Sbjct: 543 ELNGNAGNDFINGGLGDDLLRGGTGADTF 571
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G S ++ S+G D DG D + S + I +I+V +++ +
Sbjct: 8 SLWGGSGADILIASTGLDQLDGGLDFDIAVFDGRSTEFVIDTSGESIVVRRGDDNA--TV 65
Query: 339 SDVERLRFADQCIDS 353
+VERL+F D +++
Sbjct: 66 INVERLQFDDGYLEN 80
>gi|62897629|dbj|BAD96754.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 390
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 59/208 (28%), Gaps = 51/208 (24%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A +L + W + Y+ + T D+ A WS V
Sbjct: 15 VPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTP 67
Query: 68 LTFEETSIH-SDI-------------KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG 113
LTF + S +DI F + + +FD+ + W
Sbjct: 68 LTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHACQPGPGIGGDAHFDEDERWTNN 127
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ L A HE+GH+LGL H +M
Sbjct: 128 F-REYNLHRVAAHELGHSLGLSHSTDIGA-------------------LM--------YP 159
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
+F DI +Q IYG +
Sbjct: 160 SYTFSGDVQLAQDDIDGIQAIYGRSQNP 187
>gi|83643505|ref|YP_431940.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83631548|gb|ABC27515.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 2408
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 30/216 (13%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
+Y + +F TP D +G + G + Q IY
Sbjct: 951 TYDATSITSNGNTFVAPTTPQGLDEA----FHGDDEVHAG----GGDDQILAGAGNDRIY 1002
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D++ NY+D G + I I+ +VG +G D + GN
Sbjct: 1003 GDAGEDVI---YGIAGNNYLD----------GGDDKDFIYGGVDIDHIVGGAGADTLYGN 1049
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE- 342
++ G D G G DT + ++ IV + + D E
Sbjct: 1050 KGDDWLQGGLGGDFLYGDEGNDTLDGGGEGDVLAGGEGDDTYIVK--RGYGVTHIKDEEG 1107
Query: 343 --RLRFADQ----CIDSVNVKQRSILEYTASYEDLI 372
++FAD I+ + + + + Y A + ++
Sbjct: 1108 ISTIKFADTYASSTINVIQGEDKVTIRYGAEGDAVV 1143
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 35/88 (39%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G E N + + + G +G+D + G N+ + G+D +G +G D
Sbjct: 406 SIEGGETNDELVGGAGGDWLFGLAGDDTLKGEGGNDELYGGDGHDTLEGGAGNDRLEGGI 465
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLS 339
Y + + A + D N + L
Sbjct: 466 GDDTYVYTKGDGADYLLDYNGANRILLK 493
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
E + +I + + G +G+D + G ++ GND +G G DT+
Sbjct: 1186 DFSDKESDTSIYAGEGNDILYGGTGDDKLFGEGGDDTLDGGLGNDRLNGGLGADTYNVEI 1245
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I + + N D L D
Sbjct: 1246 VGGFNDIIDETGSDKNH-LNITGVDSLDD 1273
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Query: 249 SWSSI--GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+S I G N+ A+ ++V GND + G S + NDV G D
Sbjct: 1338 SFSQIIRGNESANVITAEG-GDDNVHSYGGNDYLYGGSGQDYLNGGDDNDVIYGGRDNDE 1396
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+Y + + D
Sbjct: 1397 LQGGNGDDVYVYQSGDGVDTIVLNKSGLGD 1426
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N+ + + G SG D + G N+V + ND G +G D + Y +
Sbjct: 1356 GGDDNVHSYGGN--DYLYGGSGQDYLNGGDDNDVIYGGRDNDELQGGNGDDVYVYQSGDG 1413
Query: 315 LYKIYRFENAIIVYDA 330
+ I ++ + D
Sbjct: 1414 VDTIVLNKSGLGDKDI 1429
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 218 FIQTIYDSGGDDLL------DLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+DLL D+ G ++I D E S+ ++ + E
Sbjct: 755 GNDTLLGGKGNDLLSGGAGADMISGGEGDDHIHGDSRNEYRSNASSGSAQISN-DDLLTE 813
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G S +DV+ G + + +G+DV DG G D +
Sbjct: 814 VEEGVSYDDVLSGGEGADRIWGEAGSDVIDGGEGDDILWGDRS 856
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 16/113 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
ES+ G ND ++G + + F +G+D G G D + +
Sbjct: 405 ESIEGGETNDELVGGAGGDWLFGLAGDDTLKGEGGNDELYGGDGHDTLE----------- 453
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D L D + + +L+Y + L++ D +
Sbjct: 454 --GGAGNDRLEGG---IGDDTYVYTKGDGADYLLDYNGANRILLKANASDPGK 501
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 15/99 (15%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ G + + P ++ +D++D + + ES +SI E N
Sbjct: 1159 TRGPATPGYDAAGSEGPVSGSL----NNDVIDFS-----------DKESDTSIYAGEGND 1203
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ T + + G G+D + G N+ G D ++
Sbjct: 1204 ILYGGTGDDKLFGEGGDDTLDGGLGNDRLNGGLGADTYN 1242
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 54/191 (28%), Gaps = 39/191 (20%)
Query: 222 IYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGY-EKNMTIAQHTVIESVVGSS 275
I+ G D++D L G DL + N TI+ + + G
Sbjct: 833 IWGEAGSDVIDGGEGDDILWGDRSQVTDL-----PDLDPLLHGNDTISGGAGSDQIYGHG 887
Query: 276 GNDVVIGNSANNVFFE---------------------------SSGNDVFDGSSGLDTFF 308
G+DV+ G + + + G+DV SG D +
Sbjct: 888 GDDVIDGGADKDYIWGDHDKLAGEFHGNDHIDAGDGEGQIIIGGGGSDVILSGSGRDMIW 947
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I N + D + A D + + Y +
Sbjct: 948 ADSTYDATSITSNGNTFVAPTT-PQGLDEAFHGDDEVHAGGGDDQILAGAGNDRIYGDAG 1006
Query: 369 EDLIQVIGQDV 379
ED+I I +
Sbjct: 1007 EDVIYGIAGNN 1017
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 35/132 (26%), Gaps = 42/132 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS---------------------------- 284
+ G + + + + ++G SGND + GN
Sbjct: 684 MDGAAGSDLLVGGSGSDRILGGSGNDWIWGNDSQRLFDDTGAPTPNYAKESASSEDYLDG 743
Query: 285 -----------ANNVFFESSGNDVFDGSSGLDTFFYYAPSY---LYKIYRFENAIIVYDA 330
N+ GND+ G +G D + + A
Sbjct: 744 GDGDDWISGDEGNDTLLGGKGNDLLSGGAGADMISGGEGDDHIHGDSRNEYRSNASSGSA 803
Query: 331 NEHKQDFLSDVE 342
D L++VE
Sbjct: 804 QISNDDLLTEVE 815
>gi|281341733|gb|EFB17317.1| hypothetical protein PANDA_011005 [Ailuropoda melanoleuca]
Length = 442
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 63/205 (30%), Gaps = 53/205 (25%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A ++L D+ W + + Y+ + T D+ A WS V
Sbjct: 60 VPDVAQYVLTDRTPRWEHTHLTYRIENYTPDLPRADV-------DSAMEKAFRLWSNVSP 112
Query: 68 LTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYG 113
LTF + +DI + +D + +FD+ + W
Sbjct: 113 LTFTKIFEGQADIMISFVWGDHYDNSPFDGPNGNLAHAFPPGPNLGGDAHFDEDETWTND 172
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
+ L A HE+GH+LGL H YP Y D D
Sbjct: 173 Y-RNYNLYRVAAHELGHSLGLSHSTDIGALMYPNYMYDGD-------------------- 211
Query: 173 MDASFGYCATPMVSDIVAVQKIYGA 197
DI A+Q IYG
Sbjct: 212 --------VQLSQDDISAIQAIYGP 228
>gi|197384336|ref|NP_001128002.1| matrix metallopeptidase 1a [Rattus norvegicus]
gi|197246479|gb|AAI69019.1| Mmp1a protein [Rattus norvegicus]
Length = 464
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 69/224 (30%), Gaps = 59/224 (26%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A + + W+ + Y T + I + A W
Sbjct: 86 KPRCGVPDVAPYAITHNNPRWTKTHLTYSILNYTPYLPKEVI-------ENAIERAFKVW 138
Query: 63 SKVVDLTFEET-SIHSDIKFIS-----SNNGYVCTPRYD--------SRYFMEINFDKAD 108
S V LTFE DI F S+N P Y R ++++D +
Sbjct: 139 SDVTPLTFERVFEEEGDIVFAFYRGDHSDNNPFDGPEYGLAHTFPPGPRLGGDVHYDLDE 198
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SY- 165
W + A HE+GH+LGL H +M SY
Sbjct: 199 TWTDNSDNFNLFYVTA-HELGHSLGLTHSRDVGA-------------------LMFPSYT 238
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNI 206
+ +D +++ DI +Q +YG P G
Sbjct: 239 WYTEDFVLNQE----------DINRIQALYGPSPNPIQPTGATT 272
>gi|157278171|ref|NP_001098185.1| collagenase [Oryzias latipes]
gi|71361197|dbj|BAE16357.1| collagenase [Oryzias latipes]
Length = 470
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 39/188 (20%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFIS 83
++++ + LT ++ E AL W++V L F + S +DI
Sbjct: 101 GNNLKWEKNSLTYRITNYTPDMSKEEVDESIEKALQVWARVTPLRFTKIYSSTADIMVSF 160
Query: 84 S---NNGYVCTPRYDS----------RYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ Y D + +FD + + + G +L A HE GH
Sbjct: 161 GQRAHGDYYPFDGPDGTLAHAFAPAPGIGGDAHFDDDETFTFRSNTGYVLFMVAAHEFGH 220
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+LGL H + + SY P+ ++ D+
Sbjct: 221 SLGLSHSDDPGA---------------LMYPIYSYRNPETFVLPR----------DDVRG 255
Query: 191 VQKIYGAP 198
+Q +YG
Sbjct: 256 IQSLYGPN 263
>gi|300866714|ref|ZP_07111398.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300335314|emb|CBN56558.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 949
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 63/185 (34%), Gaps = 15/185 (8%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSG 276
TI GG+D + + ID S + I + N I + ++G G
Sbjct: 695 GNDTIISGGGNDAI---SANQGDDLID--AGSGNDLIFAGKDNDAILGGDGDDKLIGDLG 749
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D +IG N+ G D DG +G + + + + K N + + E D
Sbjct: 750 ADTLIGGQGNDSLNGGDGADFLDGGAGDNIMLGGSGNDIIKGGNGNN----FLSGESGND 805
Query: 337 FL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD-VFESMKHFYEFGLS 392
L S E L D L+ + L+ IG D + G +
Sbjct: 806 TLCGGSGSELLYGGDGADTLDGCVGNDTLKGDGGNDLLMAGIGDDFLIGGAGDDSLIGSA 865
Query: 393 EGRDI 397
GRDI
Sbjct: 866 -GRDI 869
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 63/187 (33%), Gaps = 22/187 (11%)
Query: 214 KDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES-WSSIGGYEK-------N 259
K +I GG+D L D G N+I N + + + GG + N
Sbjct: 619 KADSANNSINGFGGNDTLIGMIGNDNLYGGNGNNWISANEGNDYINAGGGDNLVFAGKDN 678
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
IA ++++G GND +I N+ + G+D+ D SG D F +
Sbjct: 679 DAIAAGEGSDTLLGDLGNDTIISGGGNDAISANQGDDLIDAGSGNDLIFAGKDNDAILGG 738
Query: 320 RFENAII-----VYDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEYTASYEDL 371
++ +I D L+ + F D + I++ L
Sbjct: 739 DGDDKLIGDLGADTLIGGQGNDSLNGGDGADFLDGGAGDNIMLGGSGNDIIKGGNGNNFL 798
Query: 372 IQVIGQD 378
G D
Sbjct: 799 SGESGND 805
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 48/133 (36%), Gaps = 13/133 (9%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D + ++GG N I + + G N T+ + E + G G D + G
Sbjct: 772 DGGAGDNI---MLGGSGNDIIKGGNGNNFLSGESGNDTLCGGSGSELLYGGDGADTLDGC 828
Query: 284 SANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
N+ GND+ G +G D+ A ++ + E V D E
Sbjct: 829 VGNDTLKGDGGNDLLMAGIGDDFLIGGAGDDSLIGSAGRDIFVLTIGEGNDRVID-FEKG 887
Query: 335 QDFLSDVERLRFA 347
QD L L F
Sbjct: 888 QDLLGLKGDLTFG 900
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI ++V ++ G+ +D + +SANN GND G G D + +
Sbjct: 599 TINPNSVDTNLEGTESDDFLKADSANNSINGFGGNDTLIGMIGNDNLYGGNGNNWIS-AN 657
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N I ++ D + + + + + + + G D+
Sbjct: 658 EGNDYINAGGGDNLVFAGKDNDAIAAGEGSDTLLGDLGNDTIISGGGNDAISANQGDDLI 717
Query: 381 ES 382
++
Sbjct: 718 DA 719
Score = 44.3 bits (103), Expect = 0.074, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 15/161 (9%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+L + N +D +++ G E + + + S+ G GND +IG N+
Sbjct: 592 TPNLAIATINPNSVD------TNLEGTESDDFLKADSANNSINGFGGNDTLIGMIGNDNL 645
Query: 290 FESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ +GN+ + G D A I E + + +
Sbjct: 646 YGGNGNNWISANEGNDYINAGGGDNLVFAGKDNDAIAAGEGSDTLLGDLGNDTIISGGGN 705
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A+Q D ++ + L + D ++G D + +
Sbjct: 706 DAISANQGDDLIDAGSGNDLIFAGKDND--AILGGDGDDKL 744
>gi|84516105|ref|ZP_01003465.1| VCBS [Loktanella vestfoldensis SKA53]
gi|84509801|gb|EAQ06258.1| VCBS [Loktanella vestfoldensis SKA53]
Length = 1076
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 6/188 (3%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKN 259
+LGN Y + + T +GG +T G + S ++I N
Sbjct: 829 TLGNLSYTLAAGNVEQSVNGTF--TGGAASYIVTADAGNDT---ITGGSGTNIILAGAGN 883
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI T + ++G +GND + + N+ + +D +G D + +
Sbjct: 884 DTITSGTGDDIIMGGAGNDTITAGAGNDTIMGGADDDTITAGAGNDIITSGSGADTVTPG 943
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ I+ D +D +++ + + Q S + + + G
Sbjct: 944 TGLDTIVYTDVANEARDIITNFTTIADGAAFGAGTDKLQFSAADLASVAGFVAYSAGGVS 1003
Query: 380 FESMKHFY 387
+
Sbjct: 1004 LDIDGDAA 1011
>gi|126327112|ref|XP_001362711.1| PREDICTED: similar to matrix metalloproteinase-3 [Monodelphis
domestica]
Length = 478
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 68/210 (32%), Gaps = 48/210 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W N + Y+ T D+ AL WS V LTF S +DI
Sbjct: 108 WRNNEVTYRIVNYTPDMNEPDV-------DAAIERALKVWSDVTPLTFTRLSEGEADIMI 160
Query: 82 ISS-----------NNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
S G V Y + +++ D + W G L A HE
Sbjct: 161 SFSVKDHGDFLPFDGPGGVLAHAYPPGPKINGDVHLDDDEKWTEDT-TGINLFLTAAHEF 219
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL+H YPVY +S D + + D
Sbjct: 220 GHSLGLLHSSDTAALMYPVY----------------------NSNTDLTRFRLSQ---DD 254
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
I +Q +YG P S + + +++ P
Sbjct: 255 IDGIQSLYGYPSDSPDDPVPPTTSTEQEKP 284
>gi|288960340|ref|YP_003450680.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Azospirillum sp. B510]
gi|288912648|dbj|BAI74136.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Azospirillum sp. B510]
Length = 1716
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 15/190 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I T+ G+D D+ + + ++ T S
Sbjct: 1010 NDTLDGGAGIDTLRGGAGNDTYLVSDIGDVIVENAGEGTDEVRTGLSSYTLAANIENLTY 1069
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T + +G++GN+++IG + N+ +GND DG +G DT + Y + +
Sbjct: 1070 TGTAAFTGIGNTGNNLIIGGAGNDSLTGDAGNDTLDGGAGADTLIGGTGNDTYIVDNAGD 1129
Query: 324 AIIVYDANEHKQ--------DFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQV 374
+ +++VE L + + + L A + L +
Sbjct: 1130 VVTELAGQGTDTVRTSLASYTLVANVENLVYTGTGPVTFTGNALNNSLTGGAGADLLTGL 1189
Query: 375 IGQDVFESMK 384
G D
Sbjct: 1190 DGNDTLNGGA 1199
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 28/199 (14%)
Query: 212 QQKDSPFIQTIYDSGGDDLLD-----LTLIGG-------VKNYIDLNTESWSSIGGYEKN 259
T+ G+D LD +L+GG V N D+ TE + +
Sbjct: 912 TAFGGAGNDTLIGGTGNDTLDGGSGTDSLVGGIGDDVYVVDNVSDVVTELANEGTDEVRT 971
Query: 260 MTIAQ--HTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
A +E++ SG GN N+ +GND DG +G+DT A + Y
Sbjct: 972 TLNAYTLGANVENLTFIGSGAFTGTGNGLANILQGGAGNDTLDGGAGIDTLRGGAGNDTY 1031
Query: 317 KIYRFENAIIVYDANEHKQDFLS----------DVERLRFADQ-CIDSVNVKQRSILEYT 365
+ + ++ + D + ++E L + + +++
Sbjct: 1032 LVSDIGD--VIVENAGEGTDEVRTGLSSYTLAANIENLTYTGTAAFTGIGNTGNNLIIGG 1089
Query: 366 ASYEDLIQVIGQDVFESMK 384
A + L G D +
Sbjct: 1090 AGNDSLTGDAGNDTLDGGA 1108
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 50/162 (30%), Gaps = 5/162 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIGN 283
G D L +D+ + + G N + + + G +GND +IG
Sbjct: 868 GAGVDTLIF--DSPTALTLDVGGSGFEVVYGNVGNDRLWTSLSGPLTAFGGAGNDTLIGG 925
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ N+ SG D G G D + S + E V ++VE
Sbjct: 926 TGNDTLDGGSGTDSLVGGIGDDVYVVDNVSDVVTELANEGTDEVRTTLN-AYTLGANVEN 984
Query: 344 LRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L F +IL+ A + L G D
Sbjct: 985 LTFIGSGAFTGTGNGLANILQGGAGNDTLDGGAGIDTLRGGA 1026
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 17/190 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-----KNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G+D + +G V ID S S +
Sbjct: 1192 NDTLNGGAGADTLIGGTGNDTYVVDNVGDVLVELPDEGIDTVQSSISHTLLADFENLTLT 1251
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G++ N+++ GN A N+ G+D +G G DT + LY + +
Sbjct: 1252 GSAALTGTGNALNNLLTGNGAANLLTGLEGDDTLNGGGGADTLIGGTGNDLYVVDNAGD- 1310
Query: 325 IIVYDANEHKQDFL---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
+V + D + +++E L I + + ++L + L
Sbjct: 1311 -VVTELVGEGIDTVNASINWTLGANIENLTLTGSAAISATGNELNNVLTGNSGANLLDGG 1369
Query: 375 IGQDVFESMK 384
+G D
Sbjct: 1370 LGADSMAGGA 1379
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 68/227 (29%), Gaps = 35/227 (15%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ + ++I A+ GN ++ T+ G D LD G
Sbjct: 1409 SSYLLGANIEALTYTGTGDFAGTGN---ALDNLLTGDLGNDTLSGGDGADTLD--GGAGS 1463
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG-------SSGNDVVI----------G 282
I +GG + I+ V + G + + G
Sbjct: 1464 NLLIGGAGNDVYLVGGLGDQVVELAGEGIDEVRTALTGYTLTDGVETLTYTGVAAFAGTG 1523
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS--- 339
N+ +N+ +G D DG G DT +Y + + +I + + D +
Sbjct: 1524 NALDNLIAGGAGADTLDGGLGADTLIGGLGDDVYVVDSVGDTVI--EGADAGIDEVRTTL 1581
Query: 340 -------DVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+VERL F + + L A + L G D
Sbjct: 1582 SAFTLGDNVERLLFQGGGDAVGIGNGLDNWLTGNAGNDTLDGAAGND 1628
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/403 (14%), Positives = 117/403 (29%), Gaps = 54/403 (13%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGEW 62
T + + L ++ I + + D+ TEL + R +L +
Sbjct: 1091 GNDSLTGD-AGNDTLDGGAGADTLIGGTGNDTYIVDNAGDVVTELAGQGTDTVRTSLASY 1149
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ V ++ + + F + T + + D D G G T++
Sbjct: 1150 TLVANVENLVYTGTGPVTFTGNALNNSLTGGAGADLLTGL--DGNDTLNGGAGADTLIGG 1207
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDN---------DYENDSFLTSVMSYFMPQDSMM 173
G Y VDN D D+ +S+ + +
Sbjct: 1208 T-------------------GNDTYVVDNVGDVLVELPDEGIDTVQSSISHTLLADFENL 1248
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
+ T + + + GA G + + T+ G+DL +
Sbjct: 1249 TLTGSAALTGTGNALNNLLTGNGAANLLTG---LEGDDTLNGGGGADTLIGGTGNDLYVV 1305
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFES 292
G V + I ++ IE++ S GN NNV +
Sbjct: 1306 DNAGDV-----VTELVGEGIDTVNASINWTLGANIENLTLTGSAAISATGNELNNVLTGN 1360
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVE 342
SG ++ DG G D+ A + +Y + + +V + D + ++E
Sbjct: 1361 SGANLLDGGLGADSMAGGAGNDVYIVDNAGD--VVTELAGQGTDEVRTSLSSYLLGANIE 1418
Query: 343 RLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L + ++L + L G D +
Sbjct: 1419 ALTYTGTGDFAGTGNALDNLLTGDLGNDTLSGGDGADTLDGGA 1461
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 14/184 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ N Y+ + +D I T + S G+++ + + ++ G
Sbjct: 764 TDTTAGNQYQQAMAVRDDGSIVTAWAS------PDGSSQGIQSRVLKTAFPYDTLYGSLG 817
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T+ + G G+D++ GN +++ +GND G +G D F A I
Sbjct: 818 NDTLVAGISRTRIFGLDGDDLLQGNGSSDYLDGGNGNDTIVGGAG-DVFIGGAGVDTL-I 875
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ A+ + + +V ++ A + LI G D
Sbjct: 876 FDSPTALTLDVGGSGFEVVYGNV------GNDRLWTSLSGPLTAFGGAGNDTLIGGTGND 929
Query: 379 VFES 382
+
Sbjct: 930 TLDG 933
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G+ ++ + GN+ N+ ++GND G G D + + L+ + + D +
Sbjct: 1604 IGNGLDNWLTGNAGNDTLDGAAGNDTLLGGLGTDMLTGGSGADLFVFASGDGQDTITDFD 1663
Query: 332 EHKQDFL 338
+ D +
Sbjct: 1664 AAQGDRI 1670
Score = 40.5 bits (93), Expect = 0.95, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 19/224 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLN---TESWSSIG 254
G +G+++Y ++ + T + G D + TL N +L + +++ G
Sbjct: 942 GGIGDDVYVVDNVSD----VVTELANEGTDEVRTTLNAYTLGANVENLTFIGSGAFTGTG 997
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAP 312
N+ + +++ G +G D + G + N+ + S DV + G D
Sbjct: 998 NGLANI-LQGGAGNDTLDGGAGIDTLRGGAGNDTYLVSDIGDVIVENAGEGTDEVRTGLS 1056
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
SY A + + L+ A + LI
Sbjct: 1057 SYTLAANIENLTYTGTAAFTGIGNT--GNNLIIGGAGNDSLTGDAGNDTLDGGAGADTLI 1114
Query: 373 QVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
G D + ++ +G D L SY + NV
Sbjct: 1115 GGTGNDTYIVDNAGDVVTELAGQGTDTV---RTSLASYTLVANV 1155
>gi|330945533|gb|EGH47067.1| putative DMSO reductase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 163
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 34/177 (19%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSY 492
RN D + Y +++ DL N D H+ N+G +G+ F +YL +Y
Sbjct: 8 RNSDFYDEAWYKSNYRDLKNLNIDFAL-------HYFNYGWRQGKSPSFGFSGDMYLAAY 60
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR-----------NPDAFKALEYIASHEDLINAFA 541
D++ + HY T+G KE R N F Y +H
Sbjct: 61 PDVKTI----DMNPLLHYETYGKKEKRYVIPYAVEAIYNSTYFDDAYYQKNHN------G 110
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ + + D+ + S F+ D YL SY D+ D H+ HG
Sbjct: 111 KSTSRLASALDYITCKDNLRNPSEHFDADAYLESYPDVKE----DGVMPLLHFELHG 163
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 31/164 (18%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y ++Y DL + + H++ +G +G+ + F +YL +Y D++ +
Sbjct: 18 YKSNYRDLKNL----NIDFALHYFNYGWRQGKSPSFGFSGDMYLAAYPDVKTI----DMN 69
Query: 422 AARHYITHGVKEGR-----------NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
HY T+G KE R N F Y +H + + D+
Sbjct: 70 PLLHYETYGKKEKRYVIPYAVEAIYNSTYFDDAYYQKNHN------GKSTSRLASALDYI 123
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ FD+ YL SY D++ D H+ HG
Sbjct: 124 TCKDNLRNPSEHFDADAYLESYPDVKE----DGVMPLLHFELHG 163
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 21/147 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF--NPDLYLTSY 576
RN D + Y +++ DL N D H+ N+G+ +G+S +F + D+YL +Y
Sbjct: 8 RNSDFYDEAWYKSNYRDLKNLNIDF-------ALHYFNYGWRQGKSPSFGFSGDMYLAAY 60
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR-------ALGISGMQFKSVMNLSEKSRDKADLS 629
D+ + + HY T+G KE R + F +
Sbjct: 61 PDVKTIDMN----PLLHYETYGKKEKRYVIPYAVEAIYNSTYFDDAYYQKNHNGKST-SR 115
Query: 630 LSFDHKKVDLYTDYFGDGNYYDSDLYS 656
L+ + + ++D+D Y
Sbjct: 116 LASALDYITCKDNLRNPSEHFDADAYL 142
>gi|86749366|ref|YP_485862.1| VCBS [Rhodopseudomonas palustris HaA2]
gi|86572394|gb|ABD06951.1| VCBS [Rhodopseudomonas palustris HaA2]
Length = 5769
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/251 (18%), Positives = 91/251 (36%), Gaps = 32/251 (12%)
Query: 151 NDYENDSFLTS---VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
+ Y+N++ +S V+ Y Q +++D G + D +V LG +IY
Sbjct: 5525 SAYDNNNGTSSGSLVIQYNGQQITVVDHFGGKAIERISFDGGSV------DGYDLGTSIY 5578
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ +S SGG +DL+ N+I S + I +
Sbjct: 5579 TVRTDDPNS--------SGGARTVDLS-FTSSDNFIAGEDGSAN---------AITGGSA 5620
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA--I 325
+ + G +D + G +++ GND+ G SG DT A + +++ ++
Sbjct: 5621 RDLIFGGGHDDFLSGGEGSDLLIGGGGNDLLAGGSGNDTLRGGAGADTFELSNTGSSNFD 5680
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D + + D L + D N S + D+ + D ++
Sbjct: 5681 TILDYSSAEGDTL---DLSALLDAAYGPGNNVDASFVRLVNEGNDVKVQVDVDGATGGQN 5737
Query: 386 FYEFGLSEGRD 396
+ + L +G
Sbjct: 5738 WADVALLQGYH 5748
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 18/185 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
Y + D+ + G L D T G + + + ++ N I
Sbjct: 5386 DGTGYAVNTINFDNGTVY------GYTLGDYTFNGSDPAT---DADGFRTVSVSTGNNFI 5436
Query: 263 AQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
A + + G SG D++ G + GN++ G G DT + ++
Sbjct: 5437 AGEIEAANKITGGSGADLIFGGDLADTLNGGGGNNLIVGGKGNDTLSASTGNDVFAFGIQ 5496
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + D+ S + F D +++ S L+
Sbjct: 5497 DGTDTITDS--------SGIADAIFIDTNGAALSGLSAYDNNNGTSSGSLVIQYNGQQIT 5548
Query: 382 SMKHF 386
+ HF
Sbjct: 5549 VVDHF 5553
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 4/119 (3%)
Query: 245 LNTESWSS---IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
L+ S I G E + +I + + G+ G+D + GN+ N++ GND +G
Sbjct: 5258 LDNTGLSGSRIIAGTEASDSIYGGVNTDLMFGNGGHDTLYGNAGNDLLIGGLGNDRLEGG 5317
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
DT+ + I+ + D L+ + + + Q +
Sbjct: 5318 LNDDTYLFSLADGNDTIFDAGGTGDRIVIKTNGAD-LTGLNAHDTSSAAGTGHLMIQFN 5375
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 1/121 (0%)
Query: 258 KNMTIA-QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++T+A + + +VG G++ + GN N+ G++ G +G DT Y S
Sbjct: 3270 GSITMADGGSADDILVGGVGDNKLFGNGGNDTLIGGGGSNTIQGGAGNDTIIYNVGSGGV 3329
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ ++ + + N+ L A+YE +
Sbjct: 3330 DTVEGGSDTDTQIIVGTGGAETFNINAVSLGGISHVAANIGATVELADGANYEVATTAVE 3389
Query: 377 Q 377
+
Sbjct: 3390 E 3390
>gi|300868949|ref|ZP_07113553.1| hypothetical protein OSCI_3880006 [Oscillatoria sp. PCC 6506]
gi|300333016|emb|CBN58745.1| hypothetical protein OSCI_3880006 [Oscillatoria sp. PCC 6506]
Length = 1224
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 67/195 (34%), Gaps = 14/195 (7%)
Query: 198 PKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESW 250
GS + +Y S ++ + G D LD T+ G N + +
Sbjct: 947 NAGSGNDVVYGFSSNDNLSGSNGNDVLFGNEGTDYLDAGIGNDTVYAGKDNDVAIGGGGN 1006
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T+ +++ G ND+++G +++ + + G+D DG +G D F
Sbjct: 1007 DFLRGDLGNDTVFGGAGTQTIFGGKDNDILLGEDDDDLIYGNLGDDTIDGGNGNDLVFAN 1066
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTAS- 367
+ L F + D L E L F + D+V+ Y
Sbjct: 1067 EGADL----IFGGSDNDTVYAGKDNDTLCGGEGSDLLFGNNNDDAVDGSAGDDTVYGGKG 1122
Query: 368 YEDLIQVIGQDVFES 382
+ + G D
Sbjct: 1123 NDSVYGCTGNDTLSG 1137
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
IY + GDD +D GG N + E I G N T+ +++ G G+D++
Sbjct: 1045 IYGNLGDDTID----GGNGNDLVFANEGADLIFGGSDNDTVYAGKDNDTLCGGEGSDLLF 1100
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-------YKIYRFENAIIVYDANEHK 334
GN+ ++ S+G+D G G D+ + + + + + +
Sbjct: 1101 GNNNDDAVDGSAGDDTVYGGKGNDSVYGCTGNDTLSGDLGNDTLIGGSGNDVFIFSPDQG 1160
Query: 335 QDFLSDVER 343
D ++D ++
Sbjct: 1161 NDVITDFQK 1169
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 7/152 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I G + T+ T +++ SGNDVV G S+N+ S+GNDV G+ G D +
Sbjct: 926 NTIEGTVGDETLTGTTANDAINAGSGNDVVYGFSSNDNLSGSNGNDVLFGNEGTD--YLD 983
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASY 368
A +Y ++ + DFL F ++ + + +
Sbjct: 984 AGIGNDTVYAGKDNDVA--IGGGGNDFLRGDLGNDTVFGGAGTQTIFGGKDNDILLGEDD 1041
Query: 369 EDLI-QVIGQDVFESMKHFYEFGLSEGRDITF 399
+DLI +G D + +EG D+ F
Sbjct: 1042 DDLIYGNLGDDTIDGGNGNDLVFANEGADLIF 1073
>gi|172037004|ref|YP_001803505.1| hypothetical protein cce_2089 [Cyanothece sp. ATCC 51142]
gi|171698458|gb|ACB51439.1| hypothetical protein cce_2089 [Cyanothece sp. ATCC 51142]
Length = 1687
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 43/97 (44%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++I G + + I + + + G++GND++ G++ N+ +GNDV G +G D
Sbjct: 1546 ATGVTTIAGTKGDDIIEGTSGDDLIDGNAGNDILTGSTGNDTLSGGTGNDVLTGGAGNDV 1605
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ ++ E + D + L +++
Sbjct: 1606 LNGGSGGDIFNFSANEGRDRIEDFESGDKIRLQNIDS 1642
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + + + GS+GND + G + N+V +GNDV +G SG D F + A
Sbjct: 1561 IEGTSGDDLIDGNAGNDILTGSTGNDTLSGGTGNDVLTGGAGNDVLNGGSGGDIFNFSAN 1620
Query: 313 SYLYKIYRFENAIIVYDANEHKQ 335
+I FE+ + N Q
Sbjct: 1621 EGRDRIEDFESGDKIRLQNIDSQ 1643
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
SS TIA + + G+SG+D++ GN+ N++ S+GND G +G D
Sbjct: 1541 SSYDLATGVTTIAGTKGDDIIEGTSGDDLIDGNAGNDILTGSTGNDTLSGGTGNDVLTGG 1600
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
A + + + I + +D + D E
Sbjct: 1601 AGNDV--LNGGSGGDIFNFSANEGRDRIEDFES 1631
>gi|159026636|emb|CAO86570.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 576
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 65/193 (33%), Gaps = 30/193 (15%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI G+D G N +L T S G ++ + IE+++G++GN
Sbjct: 265 GFDTIDGGLGNDTTSYAFYRGPINA-NLATGVVSFPG---NSVFTDRLISIENLIGTAGN 320
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------------------LYK 317
D +IGN+A+N F +GND +G G D F A + Y
Sbjct: 321 DTIIGNTADNSLFGEAGNDTINGGDGNDKLFGGAGNDWIDGGFGFDTIDGGLGNDTTSYA 380
Query: 318 IYRF------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y ++ + N D L +E L + L A + +
Sbjct: 381 FYWGPINANLSTGVVSFPGNSVFTDTLVSIENLIGTAGNDTITGNTADNSLFGEAGNDTI 440
Query: 372 IQVIGQDVFESMK 384
+G D
Sbjct: 441 NGGLGLDTLTGGA 453
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI G+D G N +L+T S G ++ IE
Sbjct: 356 NDWIDGGFGFDTIDGGLGNDTTSYAFYWGPINA-NLSTGVVSFPG---NSVFTDTLVSIE 411
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G++GND + GN+A+N F +GND +G GLDT A + +++ N ++ D
Sbjct: 412 NLIGTAGNDTITGNTADNSLFGEAGNDTINGGLGLDTLTGGAGNDFFRLDNVANRDLITD 471
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 67/202 (33%), Gaps = 32/202 (15%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI G+D G N +L T S G ++ + IE+++G++GN
Sbjct: 67 GFDTIDGGLGNDTTSYAFYWGPINA-NLATGVVSFPG---NSVFTDRLISIENLIGTAGN 122
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------------------LYK 317
D +IGN+ANN F +GND +G G D F Y
Sbjct: 123 DTIIGNTANNSLFGEAGNDTINGGDGNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYA 182
Query: 318 IYRF------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y ++ + + D L +E L + + L A + +
Sbjct: 183 FYWGPINANLSTGVVSFPGDSVFTDTLVSIENLIGTAGNDTIIGNTANNSLNGGAGNDSI 242
Query: 372 IQVIGQDV--FESMKHFYEFGL 391
G D + F + G
Sbjct: 243 NGGDGNDKLFGGTGDDFIDGGF 264
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 3/141 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + TI + +S+ G GND + G + ++ G D DG G DT Y A
Sbjct: 26 YFGLWGDDTIYGYNGNDSINGGDGNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSY-AF 84
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ + N D L +E L + + L A + +
Sbjct: 85 YWGPINANLATGVVSFPGNSVFTDRLISIENLIGTAGNDTIIGNTANNSLFGEAGNDTIN 144
Query: 373 QVIGQDV--FESMKHFYEFGL 391
G D + F + G
Sbjct: 145 GGDGNDKLFGGTGDDFIDGGF 165
>gi|47228189|emb|CAG07584.1| unnamed protein product [Tetraodon nigroviridis]
Length = 519
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 67/200 (33%), Gaps = 49/200 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDIK 80
W + + + LS D+T + + A WS L F S DI+
Sbjct: 86 WHKTDLTWSVHSYPSPSLSPDLT--DGLVDTILSHAFKAWSNAAALNFHRVSTDNEGDIR 143
Query: 81 FISS----NNGYVCTPRYDSRYF----------MEINFDKADVWRYGIGKG----TILSH 122
+ ++GY + + + +FD ++W YG+ G T L
Sbjct: 144 VSFNRLFHDDGYPFDGQGGTLAHAFFPGRGEVAGDTHFDDQEIWSYGVSSGDSSTTDLFT 203
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYC 180
A+HE GHALGL H S S+M Y +++
Sbjct: 204 VAVHEFGHALGLSHS-------------------SSDPSIMKPYYQGSVGDIVNFQLA-- 242
Query: 181 ATPMVSDIVAVQKIYGAPKG 200
D A+Q++YG
Sbjct: 243 ----ADDKNAIQQLYGVRDN 258
>gi|83942092|ref|ZP_00954554.1| hypothetical protein EE36_07648 [Sulfitobacter sp. EE-36]
gi|83847912|gb|EAP85787.1| hypothetical protein EE36_07648 [Sulfitobacter sp. EE-36]
Length = 829
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T++ + ++G G+D++ GN+ ++ +GNDV G G D F Y A
Sbjct: 698 TVNGGSGNDTLSGDNGADQLIGGDGDDLIKGNAGHDTLDGGAGNDVLSGGIGADRFIYGA 757
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
++ E + D+ LS + FA
Sbjct: 758 GQDTILSFQNEIDTLSLDSALWGGGSLSMSQLQTFA 793
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 50/169 (29%), Gaps = 21/169 (12%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ +GG+D + L +I G + I T + + G G D +
Sbjct: 546 LIGAGGNDTI-------------LGEAGADTIYGNGGSDLIEGGTEGDQIWGGIGWDTLR 592
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYRFENAIIVYDANEH 333
G+ ++ + G D G G DT Y + I + A +
Sbjct: 593 GSDGDDALWGGDGYDALGGGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADSLWGGAGKD 652
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + ++L L+ + + L I D
Sbjct: 653 RLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGNDRLAGGINNDTVNG 701
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 13/186 (6%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ I+ + S ++ G D L G + + N + G +
Sbjct: 576 GTEGDQIWGGIGWDTLRGSDGDDALWGGDGYDAL---GGGDGNDTLTGNNGADRLYGDRD 632
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ I +S+ G +G D + G++ + SGND G++G D + +
Sbjct: 633 DDHLIG-GLNADSLWGGAGKDRLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGNDRLA 691
Query: 318 IYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + D LS ++L D L+ A + L
Sbjct: 692 GGINNDTV----NGGSGNDTLSGDNGADQLIGGDGDDLIKGNAGHDTLDGGAGNDVLSGG 747
Query: 375 IGQDVF 380
IG D F
Sbjct: 748 IGADRF 753
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 19/162 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSG 303
+ G + I+ + ++G+ GND ++G + + + + G+D+ G G
Sbjct: 528 LEGDAADDHISGRADGDRLIGAGGNDTILGEAGADTIYGNGGSDLIEGGTEGDQIWGGIG 587
Query: 304 LDTFFYYAPSYL------YKIYRFENAIIVYDANEHKQDFL--SDVERLRFADQCIDSVN 355
DT Y + N D + L
Sbjct: 588 WDTLRGSDGDDALWGGDGYDALGGGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADSLWG 647
Query: 356 VKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGR 395
+ LE +A + L+ G D + F + R
Sbjct: 648 GAGKDRLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGNDR 689
Score = 44.0 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++ G ++ T+ T + + G G D + G + +++ + G D+ G SG D
Sbjct: 356 SGRVAAATGGDQADTLTGGTGGDLLSGGDGADHIAGRAGDDILRDGGGRDLLTGGSGRDL 415
Query: 307 FFYYAPSYLYKIYRFENA 324
F A I F++A
Sbjct: 416 FVLSADGEADTIADFDSA 433
Score = 41.3 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 9/121 (7%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+I D+ G L ++ + L+ + S T+ + + G D +
Sbjct: 312 SIEDTEGSTLDAVSALDFSVQGDLLHLAAASGAEAGLSIFTVDISGRVAAATGGDQADTL 371
Query: 281 IGNSA---------NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G + + +G+D+ G D + L+ + A + D +
Sbjct: 372 TGGTGGDLLSGGDGADHIAGRAGDDILRDGGGRDLLTGGSGRDLFVLSADGEADTIADFD 431
Query: 332 E 332
Sbjct: 432 S 432
>gi|260220555|emb|CBA28210.1| hypothetical protein Csp_A06140 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 1771
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 64/180 (35%), Gaps = 13/180 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQH 265
Y + + G+D L+ +GG I + + + G + N +
Sbjct: 1106 YGADDTLTGHAGGDLLSGGAGNDALN--GLGGNDYLI---GGAGNDQLNGGDGNDDLFGG 1160
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ G G D +IG S + +GNDV G +G D + +Y R +
Sbjct: 1161 AGDDTLEGGEGVDYLIGGSGADTINGGNGNDVITGGAGNDILNGGRGNDVYHFNRGDGQD 1220
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS----ILEYTASYEDLIQVIGQDVFE 381
+ +A + E + +Q + + + + S + E Y +++ +
Sbjct: 1221 TINEAALGTETIQ---ESYTYTEQVLQTQSDGKSSYQVWVNETRTGYRSVLRAVEGGEDT 1277
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 53/170 (31%), Gaps = 9/170 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
G LG I S + G+D L D G + I
Sbjct: 1500 GITNTYLGQGGADIADTLTGSAGADWMDGFAGNDTLRAGAGKDFVQGGSGNDTI-YGEAD 1558
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N T+ T + VVG +GND + G+ N+V G+D+ +G +G D
Sbjct: 1559 DDLLSGGLGNDTVYGGTGNDIVVGDAGNDSLFGDEGNDVLAGGKGDDILNGGAGDDFIMG 1618
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
A + Y+ + D E+ + +
Sbjct: 1619 DAGNDTYQASTGFDTYRF--GFGDGNDTYIGSEQADINGTDVIQLESGVT 1666
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 42/140 (30%), Gaps = 13/140 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG+D L G I + S+ G + ++++G GND +I +
Sbjct: 865 GGGNDTLS----GAAGKDILVGGTGDDSLDGGADKDFLFAGAGNDTLIGGDGNDYLIAEA 920
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++V G+DV G G DT A + + D
Sbjct: 921 GDDVLEGGDGDDVLVGMDGNDTLRGGAGKDML----LGGVGVDILQGGGGDDT-----YF 971
Query: 345 RFADQCIDSVNVKQRSILEY 364
F D + Y
Sbjct: 972 YFRGDGKDQIFDNLEHQETY 991
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 14/146 (9%)
Query: 186 SDIVAVQKIYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+D+ A+ + G+ K + G + Y V +S D + +L + +
Sbjct: 569 ADLAALSALTGSAKATRINGGDGYDSLVVLDNSQLNLVADDINVESVLAGSANDSITGKN 628
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ N T +++ + G DV++G + N+ +G DV G G
Sbjct: 629 N------------AVNYVFDGGTGNDNLTTAGGEDVLLGGAGNDTLKSGAGADVLSGGEG 676
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYD 329
D A +Y + R + A + D
Sbjct: 677 TDRLEGGAGDDVYVLNRGDGADRILD 702
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 39/95 (41%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G ++ A V + G +GND + G+SA ++ ++G D +G +G D + +
Sbjct: 1348 GTTGNDVLTADTNVATWLGGGAGNDTLTGSSAADILHGAAGADTLNGGTGDDVYIFGRGD 1407
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ +A + D + D L + D
Sbjct: 1408 GKDILNDSGSAGVGTDKSRPGGDKLLFGTNITMED 1442
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 1/127 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G+ +++ + + G +D + G++ ++ +GND +G G D A
Sbjct: 1085 TFGFADGLSLNMGNIDQVASGYGADDTLTGHAGGDLLSGGAGNDALNGLGGNDYLIGGAG 1144
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ N + A + + V+ L ++ A + L
Sbjct: 1145 NDQLNGGD-GNDDLFGGAGDDTLEGGEGVDYLIGGSGADTINGGNGNDVITGGAGNDILN 1203
Query: 373 QVIGQDV 379
G DV
Sbjct: 1204 GGRGNDV 1210
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 7/118 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T++ + +VG +G+D + G + + F +GND G G D A
Sbjct: 862 MSGGGGNDTLSGAAGKDILVGGTGDDSLDGGADKDFLFAGAGNDTLIGGDGNDYLIAEAG 921
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTAS 367
+ + ++ ++ D N D L + L Y
Sbjct: 922 DDVLEGGDGDDVLVGMDGN----DTLRGGAGKDMLLGGVGVDILQGGGGDDTYFYFRG 975
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVI----------GNSANNVFFESSGNDVFDGSSGLD 305
+ + + + ++ G++GNDV+ G + N+ SS D+ G++G D
Sbjct: 1331 FINDFAVDIGDIADARKGTTGNDVLTADTNVATWLGGGAGNDTLTGSSAADILHGAAGAD 1390
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
T +Y R + I+ D+
Sbjct: 1391 TLNGGTGDDVYIFGRGDGKDILNDSGSAGVGT 1422
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 25/67 (37%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G+D+++G S +++ + G D G +G D F +A
Sbjct: 530 GGAGDDILLGGSGDDILLDGEGADQLQGGAGNDQLFVDGADLAALSALTGSAKATRINGG 589
Query: 333 HKQDFLS 339
D L
Sbjct: 590 DGYDSLV 596
Score = 41.6 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 50/180 (27%), Gaps = 20/180 (11%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D + +T N + E + G + +++ I + G G +
Sbjct: 1470 TDSVTITNWSNTNNRV----EVFQFFDGKDFDVS-----GITNTYLGQG-----GADIAD 1515
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
S+G D DG +G DT A + + I ++ L + + +
Sbjct: 1516 TLTGSAGADWMDGFAGNDTLRAGAGKDFVQGGSGNDTIYGEADDDLLSGGLGN-DTVYGG 1574
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGR---DITFDSY 402
V L + L G D+ F FD+Y
Sbjct: 1575 TGNDIVVGDAGNDSLFGDEGNDVLAGGKGDDILNGGAGDDFIMGDAGNDTYQASTGFDTY 1634
>gi|149633273|ref|XP_001509903.1| PREDICTED: similar to matrix metalloproteinase 13; collagenase 3
[Ornithorhynchus anatinus]
Length = 471
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 47/189 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKF 81
W ++ + Y+ T ++ + + AL WS V L F S +DI
Sbjct: 113 WPHFNLTYRIMNYTADLTQAEVDK-------AIKKALKVWSNVTPLNFTRLRSGTADIMI 165
Query: 82 ISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+G P Y + +FD + W KG L A HE
Sbjct: 166 SFGRKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWSSD-SKGYNLFLVAAHEF 224
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + + +Y ++ D+
Sbjct: 225 GHSLGLDHSRDPGA---------------LMFPIYTYVGNTGFVLP----------DDDV 259
Query: 189 VAVQKIYGA 197
+Q +YGA
Sbjct: 260 QGIQALYGA 268
>gi|327291129|ref|XP_003230274.1| PREDICTED: matrix metalloproteinase-15-like, partial [Anolis
carolinensis]
Length = 404
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 64/203 (31%), Gaps = 50/203 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+ + + T +QE R A W + L+F E S
Sbjct: 122 YALTGRRWTQSQLTFSIQNHTEKLGR-------SASQEAIRRAFRVWEEATPLSFREVSF 174
Query: 76 ---------------HSDIKFISSNNGYVCTPRYDSRY-FMEINFDKADVWR--YGIGKG 117
H D G++ + + +FD + W G G
Sbjct: 175 SGTEADLVVLFASGFHGDSSPFDGAGGFLAHAFFPGPGMGGDAHFDLDEPWTLENVDGAG 234
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L A+HE+GH+LGL H S +++M+ F
Sbjct: 235 NNLFLVAVHELGHSLGLEHS-------------------SHPSAIMAPFYQWMDTQAFR- 274
Query: 178 GYCATPMVSDIVAVQKIYGAPKG 200
D+ +Q++YG P G
Sbjct: 275 -----LPDDDLRGIQQLYGVPGG 292
>gi|329848974|ref|ZP_08264002.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844037|gb|EGF93606.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 773
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 69/221 (31%), Gaps = 22/221 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--IGGVKNYIDLNTESWSSI 253
G + G+ ++ G D +D + G +DL + ++S
Sbjct: 264 GVNIINGGDG----NDTIDGGMGYDSLDGGNGIDTVDYSGVDTGVASVVVDLQSGAYSD- 318
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
++I E+V G++GN IG + N +G D DG G DT+ +
Sbjct: 319 -----GVSIETILNFENVWGAAGNQSYIGTAGANWIDGGAGADTMDGGDGNDTYVVDNAA 373
Query: 314 Y--------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ R + + AN + L ++L+
Sbjct: 374 DRIIEASGKGTDLVRSSVSFSLAGANAEQLILLGSAVVATGNGLGNTLTGNSGNNVLDGA 433
Query: 366 ASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
A + ++ +G D EG D F + Y
Sbjct: 434 AGSDTMLGGLGDDSYYVSVASDVVTEVAGEGTDTIFTALTY 474
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 72/207 (34%), Gaps = 12/207 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQ---TIYDSGGD-DLLDLT--LIGGVKNYIDLNTESWSSIGGY 256
G N Y + +D G D DLLD++ + D+ T W+ G
Sbjct: 182 GGNTYDGGSGNDTVDGSFDYGSQFDGGADSDLLDMSWVVETFGDVTFDMVTGVWNDGFGS 241
Query: 257 EKNM---TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + E+VVG+ G +++ G N+ G D DG +G+DT Y
Sbjct: 242 FTAVNFESYDGAGGAEAVVGTDGVNIINGGDGNDTIDGGMGYDSLDGGNGIDTVDYSGVD 301
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ Y ++ + + + E + A + + ++ A + +
Sbjct: 302 TGVASVVVDLQSGAY-SDGVSIETILNFENVWGAAGNQSYIGTAGANWIDGGAGADTMDG 360
Query: 374 VIGQD--VFESMKHFYEFGLSEGRDIT 398
G D V ++ +G D+
Sbjct: 361 GDGNDTYVVDNAADRIIEASGKGTDLV 387
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 8/141 (5%)
Query: 227 GDDLL-------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G+D ++ GG + +T S+S G Y + +T+ I + G+S +
Sbjct: 607 GNDTYYVQNTGDNVVEAGGAGTDLIYSTVSYSLAGRYAETITLTGAANI-NATGNSLGNT 665
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ GNS NN+ GND G G D F + A S + KI+ F A +
Sbjct: 666 LNGNSGNNLINGKGGNDNLSGGLGADIFLFEAGSGVDKIHDFSAAQSDIININAYTGGVV 725
Query: 340 DVERLRFADQCIDSVNVKQRS 360
+ + + +
Sbjct: 726 NYAIVTQSGSNVLITLGAATP 746
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 66/227 (29%), Gaps = 56/227 (24%)
Query: 205 NIYKIEVQQKDSPFIQT--IYDSGGD-DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y ++D+G D D D+TL IDL ++++ GG +
Sbjct: 69 TYYGGNGNDTLGGGFSYGNVWDAGADIDTADMTLHNFS-AVIDLAAGTYATSGGTLNILN 127
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANN------------------VFFESSGNDVF----- 298
E ++ + ND +IG NN SGND F
Sbjct: 128 F------EHLIAGNQNDTLIGTGGNNRIEANGGDDDIDGGSGNDTLLGGSGNDRFHTALG 181
Query: 299 -----DGSSGLDT----------FFYYAPSYLYKI--YRFENAIIVYDA------NEHKQ 335
DG SG DT F A S L + + +D +
Sbjct: 182 GGNTYDGGSGNDTVDGSFDYGSQFDGGADSDLLDMSWVVETFGDVTFDMVTGVWNDGFGS 241
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ E A V +I+ + + +G D +
Sbjct: 242 FTAVNFESYDGAGGAEAVVGTDGVNIINGGDGNDTIDGGMGYDSLDG 288
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T E+V +GND + G +N+ +GND + + G DT + + F +
Sbjct: 10 TGFENVTTGAGNDTITGTGGSNLIQAGAGNDRVEAAVGSDTVYGEDGNDYLVSAIFGSRT 69
Query: 326 IVYDANEHKQDFLSD 340
+ D L
Sbjct: 70 YY---GGNGNDTLGG 81
>gi|304414946|ref|ZP_07395793.1| RTX-like toxin [Candidatus Regiella insecticola LSR1]
gi|304283100|gb|EFL91517.1| RTX-like toxin [Candidatus Regiella insecticola LSR1]
Length = 774
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 25/129 (19%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ V +YG + + I E ++ GG+DL L
Sbjct: 670 MNKVHWLYGTNEN---DEIEGNEKDDH-------LFGLGGNDL--------------LRG 705
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + G E + + T + + G +G D + G++ ++ + GND G +G D
Sbjct: 706 GAGNDLLDGGEGDDILLGGTGNDHLFGGAGIDKLFGDTGDDRLYGGEGNDELSGGAGNDK 765
Query: 307 FFYYAPSYL 315
+ A +
Sbjct: 766 LYGDAGNDT 774
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 31/80 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + + G G+D+++G + N+ F +G D G +G D +
Sbjct: 694 LFGLGGNDLLRGGAGNDLLDGGEGDDILLGGTGNDHLFGGAGIDKLFGDTGDDRLYGGEG 753
Query: 313 SYLYKIYRFENAIIVYDANE 332
+ + + N+
Sbjct: 754 NDELSGGAGNDKLYGDAGND 773
Score = 44.0 bits (102), Expect = 0.095, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 48/133 (36%), Gaps = 3/133 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I Q + IE G +D ++G+ +N + G D G++G D +
Sbjct: 106 DANTLIETGAIIQLSNIEHAQGHPETHDYLVGDQHDNHLNGAGGIDYLIGNAGND--WLT 163
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + ++ + + + +E + + K++ + +
Sbjct: 164 LAAGVADGGEGKDHYRILQNKQSIHAQIKIIETHTLQNSTVLLDYQKEKILAISLTGNDV 223
Query: 371 LIQVIGQDVFESM 383
+I++ + E++
Sbjct: 224 VIRLRNDNNSETL 236
Score = 41.6 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + N+ + +D G G D A + L ++ ++ N+H +
Sbjct: 676 LYGTNENDEIEGNEKDDHLFGLGGNDLLRGGAGNDLLDGGEGDDILLGGTGNDHLFGG-A 734
Query: 340 DVERLRFADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQD 378
+++L F D D + + + L A + L G D
Sbjct: 735 GIDKL-FGDTGDDRLYGGEGNDELSGGAGNDKLYGDAGND 773
>gi|301773294|ref|XP_002922060.1| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase-like
[Ailuropoda melanoleuca]
Length = 469
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 63/205 (30%), Gaps = 53/205 (25%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A ++L D+ W + + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQYVLTDRTPRWEHTHLTYRIENYTPDLPRADV-------DSAMEKAFRLWSNVSP 146
Query: 68 LTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYG 113
LTF + +DI + +D + +FD+ + W
Sbjct: 147 LTFTKIFEGQADIMISFVWGDHYDNSPFDGPNGNLAHAFPPGPNLGGDAHFDEDETWTND 206
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
+ L A HE+GH+LGL H YP Y D D
Sbjct: 207 Y-RNYNLYRVAAHELGHSLGLSHSTDIGALMYPNYMYDGD-------------------- 245
Query: 173 MDASFGYCATPMVSDIVAVQKIYGA 197
DI A+Q IYG
Sbjct: 246 --------VQLSQDDISAIQAIYGP 262
>gi|313241389|emb|CBY33659.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 69/243 (28%), Gaps = 62/243 (25%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP + E + + W + + Y + + A EW
Sbjct: 274 GKPDFEPE---KYQIGGPAWRDNTVSYSMFSYSNDLPI-------EIQDDTVDKAFYEWE 323
Query: 64 KVVD---LTFEETSIHSDIKFISS-----------------NNGYVCTPRYDSRYFMEIN 103
KV + + + IK + + P Y + + +
Sbjct: 324 KVANLRPVNLGPAVDSAKIKISFGRGDHWDGYPFDGQHGTLAHAFFNDPGYPNDLEGDAH 383
Query: 104 FDKADVWRYGIGKGT---ILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
FD+ + W G G+ T A+HE GH+LGL H + YP Y +E
Sbjct: 384 FDEDEFWTLGEGRITKAYSFFLVAVHEFGHSLGLGHSNNPEAVMYPSYHFTKKFE----- 438
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
M Y DI +Q +YG P G+
Sbjct: 439 ---MPY--------------------DDIRGIQALYGPPTGTARPTTMTTSNDSLCDSDF 475
Query: 220 QTI 222
+I
Sbjct: 476 DSI 478
>gi|163743358|ref|ZP_02150738.1| bifunctional hemolysin-adenylate cyclase precursor [Phaeobacter
gallaeciensis 2.10]
gi|161383352|gb|EDQ07741.1| bifunctional hemolysin-adenylate cyclase precursor [Phaeobacter
gallaeciensis 2.10]
Length = 1603
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 196 GAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
GA G+ + Y + T++ G D+L I L ++
Sbjct: 1413 GANFFKSGDGNDVISAYGGDDTIHGGEGTDTLHGGDGFDVLSYEGHS-TAVRIKLTEQTS 1471
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I + + E V+GS +D + G + N+ +GND G G DTF +
Sbjct: 1472 EFIPSPTNYVAGDHISGFEGVIGSDFDDDLNGTAGRNLLEGGAGNDRLSGGDGFDTFVFR 1531
Query: 311 APSYLYKIYRF 321
A + +I F
Sbjct: 1532 AGHGMDRITDF 1542
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S++ + G + + GS G D + G + N++ +G D DG +G D
Sbjct: 1293 RDGSYNVLLGDAGQNKLVGDMDANLIRGSGGADTISGGAGNDLIDGGAGADNLDGGAGFD 1352
Query: 306 TFFYYAPSYLYKIY-----RFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQR 359
Y + +Y + ++++ N++ +E A + V
Sbjct: 1353 VLSYEGATNGIVLYFDNPAKGWSSLVADIVNDNVTPSSESIENFEGAVGTSFTDIFVGND 1412
Query: 360 SILEYTA-SYEDLIQVIGQD 378
+ + D+I G D
Sbjct: 1413 GANFFKSGDGNDVISAYGGD 1432
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDG---SSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ G+ ND + G+ ++ + +G+D F G D +Y I F +
Sbjct: 1036 IFGTEHNDTIRGSGEDDYLYGGAGDDHFTYSQIGGGNDILVGGEGRDVYNITYFPAS--- 1092
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Y ++ E ++ +++++ + + + +DL+ +G +++ ++
Sbjct: 1093 YGGGSQGHHLITGPEAEDIKGDVLN-IHMREDGDIWFNSYGDDLVISLGAHSSFTVQDYF 1151
>gi|163795703|ref|ZP_02189668.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
gi|159178999|gb|EDP63534.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
Length = 565
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 75/199 (37%), Gaps = 20/199 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI------ 253
G GN++ + +Q +Y GDD L + G V + + +
Sbjct: 300 GGAGNDLISFSGASVNVAGLQVVYGGDGDDTLFGSKNGTVNFTFAFFGGAGNDVLRGHTG 359
Query: 254 ----GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G E N T++ ++++VG GND+++G S +V + GND G G DT
Sbjct: 360 NDLLSGGEGNDTLSGGEGLDTLVGGIGNDLLLGLSTGSVMYGGEGNDTLSGGDGTDTLSG 419
Query: 310 YAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
A + + + A +Y N D L + AD+ + ++ +I
Sbjct: 420 GAGNDLVFSGSGNDIMSGGDGADSLYATNTLGADTLVGGD---GADRFVFGISAVNTAIA 476
Query: 363 EYTASYEDLIQVIGQDVFE 381
+TA + + G
Sbjct: 477 GFTALNASVHLISGFARGT 495
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 14/189 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--------DLTLIGGVKNYIDLNTESWS 251
G+LGN+I+ + TIY G+D + + + G N +
Sbjct: 114 GNLGNDIFT------NVTGAATIYGGQGNDTVAIVTTNTSNTVVFGEEGNDVITTAGGAD 167
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + N ++ + + G+ GND + G + N++ + GNDV G G D +
Sbjct: 168 SIFGGQDNDLVSAGQNADLIYGNLGNDTLSGGTGNDIAYGGQGNDVLSGEDGADVLWGNL 227
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + D N+ D + + + ++ L
Sbjct: 228 GNDILIGGSAADTLYGNDGNDSITGGEGDDSIMGATGNDLIVAGLGSDTVYGGDGQDTIL 287
Query: 372 IQVIGQDVF 380
+ V
Sbjct: 288 AATLASGVA 296
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 66/185 (35%), Gaps = 11/185 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQ------TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GN+ I + + I +GG D ++ GG N + ++ I G
Sbjct: 135 GNDTVAIVTTNTSNTVVFGEEGNDVITTAGGAD----SIFGGQDNDLVSAGQNADLIYGN 190
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N T++ T + G GNDV+ G +V + + GND+ G S DT + +
Sbjct: 191 LGNDTLSGGTGNDIAYGGQGNDVLSGEDGADVLWGNLGNDILIGGSAADTLYGNDGNDSI 250
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI-LEYTASYEDLIQVI 375
+++I+ N+ L Q + L Y + DLI
Sbjct: 251 TGGEGDDSIMGATGNDLIVAGLGSDTVYGGDGQDTILAATLASGVALLYGGAGNDLISFS 310
Query: 376 GQDVF 380
G V
Sbjct: 311 GASVN 315
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 2/147 (1%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D DL + I S + GG + + T++ T ++ + G+ G+D ++G +
Sbjct: 35 DGADLIYGNQGNDLISAAGGSDTVFGGQDAD-TVSGDTGLDLIYGNIGDDSLLGGDDADT 93
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFA 347
+ GND+ DG +G D F + ++ I N+ ++ + F
Sbjct: 94 LYGGQGNDIIDGGAGTDVMFGNLGNDIFTNVTGAATIYGGQGNDTVAIVTTNTSNTVVFG 153
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQV 374
++ D + + + DL+
Sbjct: 154 EEGNDVITTAGGADSIFGGQDNDLVSA 180
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 40/138 (28%), Gaps = 8/138 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + I + + + + G+D V G + +G D+ G+ G D+
Sbjct: 30 TVSALDGADLIYGNQGNDLISAAGGSDTVFGGQDADTVSGDTGLDLIYGNIGDDSLLGGD 89
Query: 312 PSYLYKIYRF-----ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + A D ++V A +I+
Sbjct: 90 DADTLYGGQGNDIIDGGAGTDVMFGNLGNDIFTNV---TGAATIYGGQGNDTVAIVTTNT 146
Query: 367 SYEDLIQVIGQDVFESMK 384
S + G DV +
Sbjct: 147 SNTVVFGEEGNDVITTAG 164
Score = 37.4 bits (85), Expect = 7.1, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 37/128 (28%), Gaps = 8/128 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT------ 306
+ G I+ ++V G D++ GN N++ + G+D G DT
Sbjct: 13 LTGTASADVISALAGPDTVSALDGADLIYGNQGNDLISAAGGSDTVFGGQDADTVSGDTG 72
Query: 307 --FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
Y + + + D + + + NV + +
Sbjct: 73 LDLIYGNIGDDSLLGGDDADTLYGGQGNDIIDGGAGTDVMFGNLGNDIFTNVTGAATIYG 132
Query: 365 TASYEDLI 372
+ +
Sbjct: 133 GQGNDTVA 140
>gi|17233144|ref|NP_490234.1| hypothetical protein all7128 [Nostoc sp. PCC 7120]
gi|17135666|dbj|BAB78212.1| all7128 [Nostoc sp. PCC 7120]
Length = 3083
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D++ TL+G +N I +GG + T ++V G +GND + G
Sbjct: 2907 GGNDVI--TLLGSYQNAI-------VDLGG--GDDTFIGGNGSDNVSGGAGNDTIFGFGG 2955
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
N+ + G+D+ G SG D + ++ + I D +
Sbjct: 2956 NDNLTGNDGDDILVGGSGNDRLTGGSGKDIFSFSSLADGIDTITDFSVADDKIR 3009
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 8/135 (5%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++YG G + +Y + +GG D + I +N + S
Sbjct: 932 RLYG---GDRDDFVYGDDGDDWLDGGAGADILNGGAG-FDTASYTSATSAISINLVTQVS 987
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G ++ IE +VGS +D +IG+ NN F GND G +G D
Sbjct: 988 TGDAADDVF----QSIEQIVGSRYDDTLIGDEDNNEFDGGEGNDFISGGAGDDRLSPGWG 1043
Query: 313 SYLYKIYRFENAIIV 327
+ + +++
Sbjct: 1044 DDVIDGGTGTDTLVI 1058
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + I +++ G +GND + G N+ GND G +G DT
Sbjct: 1586 TISGSAADDFIDGWLSNDTLSGGAGNDTLWGQDGNDFLNGEDGNDSLQGGNGNDTLTPGW 1645
Query: 312 PSYLYKIYRFENAIIVYDAN 331
+ + + +++ +N
Sbjct: 1646 GNDVVDGGAGTDVLVLDYSN 1665
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 227 GDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GDD + + ++ID L+ ++ S G N T+ + + G GND + G +
Sbjct: 1583 GDDTISGS---AADDFIDGWLSNDTLS---GGAGNDTLWGQDGNDFLNGEDGNDSLQGGN 1636
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
N+ GNDV DG +G D + + +
Sbjct: 1637 GNDTLTPGWGNDVVDGGAGTDVLVLDYSNLNTRAVAWRT 1675
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 8/182 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTI 262
+ + Q S + I D G +D +++ + DL + I G + TI
Sbjct: 867 TVSAFNIPQTYSGVSKIIADGGTKNDTIEIKPDIEISA--DLKGGAGEDLIYGGSGSDTI 924
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +D V G+ ++ +G D+ +G +G DT Y + + I
Sbjct: 925 RGGADWDRLYGGDRDDFVYGDDGDDWLDGGAGADILNGGAGFDTASYTSATSAISI---- 980
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N + + D +E++ + + + + + + + G D
Sbjct: 981 NLVTQVSTGDAADDVFQSIEQIVGSRYDDTLIGDEDNNEFDGGEGNDFISGGAGDDRLSP 1040
Query: 383 MK 384
Sbjct: 1041 GW 1042
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 70/225 (31%), Gaps = 59/225 (26%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG--------------------- 237
K LG++IY ++ Q I+ D+GG D L LT
Sbjct: 1463 KAGLGDDIYILDTQNAGGSQIE---DAGGTDTLRLTTRNPGATNTPRITDADLSLAVPTT 1519
Query: 238 --------GVKNYIDLNTES-------------WSSIGGYEKNMTI-----AQHTVI--- 268
G IDLN + + ++G I I
Sbjct: 1520 GIFGMRRAGTSLIIDLNKDGIAASKTDLTILNFFDTVGTGAGTGFIETVANLAGAEILSK 1579
Query: 269 -----ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ GS+ +D + G +N+ +GND G G D + + N
Sbjct: 1580 LQVGDDTISGSAADDFIDGWLSNDTLSGGAGNDTLWGQDGNDFLNGEDGNDSLQ-GGNGN 1638
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ D + + L +++ V R++ + +Y
Sbjct: 1639 DTLTPGWGNDVVDGGAGTDVLVLDYSNLNTRAVAWRTLSGTSGNY 1683
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 59/196 (30%), Gaps = 26/196 (13%)
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGY----CATP-MVSDIVAVQKIYGAPKGSLGNNIYKI 209
D + SV S + + S+ + + P + +D V I + G Y +
Sbjct: 1889 QDRYFLSVSSTNSTEIQQVAESYDFRVVGGSEPVLAADGAKVAFIKAINADNQGYGSYGL 1948
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-- 267
V T+ ++ Y L S+ IG ++ +A +
Sbjct: 1949 YVADPYKTGQATLV-----TTVNRDETSNHGLYGSLALSSYVDIGVRYNSLDLATGSGEI 2003
Query: 268 ------------IE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
IE + G+ D ++G + ++ G D G DT+ A +
Sbjct: 2004 STWGPSHVRYSNIERFDITGTRYGDELLGGNLDDKLTGGGGADTLKAGLGNDTYILAAQT 2063
Query: 314 YLYKIYRFENAIIVYD 329
+ D
Sbjct: 2064 AGGSKIEDDGENDTLD 2079
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 2/107 (1%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVV 280
+ + D + N LN + + S G A ++ G+ N+ +
Sbjct: 2727 WLNFNTDTRTFSGNPTTNNAGILNIKVTASDNQGTTVTDIFALTVTASNINPGNDTNNSL 2786
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G S+ +V G+D +G +G DT + + I
Sbjct: 2787 SGTSSADVLNGFGGDDYIEGLAGNDTIDGGIGRFDRLFGGDGDDAIT 2833
Score = 44.0 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 19/129 (14%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIA-------------QHTVIESV 271
G+D +++T N + N S I G + I + +
Sbjct: 2846 GNDTINVTFAANWDNDSNPNNSPRSDGKITGGYGDDNITVTMNNSKFFINMKGDEPVNNA 2905
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G + ++G+ N + G+D F G +G D A + F
Sbjct: 2906 QGGNDVITLLGSYQNAIVDLGGGDDTFIGGNGSDNVSGGAGND----TIFGFGGNDNLTG 2961
Query: 332 EHKQDFLSD 340
D L
Sbjct: 2962 NDGDDILVG 2970
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 60/231 (25%), Gaps = 44/231 (19%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
DI A+ A + GN+ + + GGDD ++ + G ID
Sbjct: 2765 DIFAL--TVTASNINPGNDT---NNSLSGTSSADVLNGFGGDDYIE--GLAGND-TIDGG 2816
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN---------------VFFE 291
+ + G + + I I G GND + A N
Sbjct: 2817 IGRFDRLFGGDGDDAITDPDGILGAHGGLGNDTINVTFAANWDNDSNPNNSPRSDGKITG 2876
Query: 292 SSGNDVF-------------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D + + G + SY I +
Sbjct: 2877 GYGDDNITVTMNNSKFFINMKGDEPVNNAQGGNDVITLLGSYQNAIVDLGGGDDTFIGGN 2936
Query: 333 HKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + + IL + + L G+D+F
Sbjct: 2937 GSDNVSGGAGNDTIFGFGGNDNLTGNDGDDILVGGSGNDRLTGGSGKDIFS 2987
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 16/58 (27%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++G+ D + G + ++ G D G D + +
Sbjct: 1435 IIGTRYGDELFGGNLDDSLMGGGGADTLKAGLGDDIYILDTQNAGGSQIEDAGGTDTL 1492
>gi|237746569|ref|ZP_04577049.1| MadA protein [Oxalobacter formigenes HOxBLS]
gi|229377920|gb|EEO28011.1| MadA protein [Oxalobacter formigenes HOxBLS]
Length = 3643
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 68/184 (36%), Gaps = 11/184 (5%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + + ++ + D GD +D + I ++ G N ++
Sbjct: 3426 TFDVNLNGLNTAPGSSETDVLGDTTVDHS-------QILFGEGGNDTLHGGHGNDYLSGG 3478
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ G G+DV+ G N++ +G+DV G G DTF ++A R ++
Sbjct: 3479 DGDDALYGGEGHDVLQGGDGNDILVGGAGDDVLTGGLGSDTFRWHAGDLDGGRDRGDHIT 3538
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI----LEYTASYEDLIQVIGQDVFE 381
+ N D L E L+ + ++ ++ ++ + I +D +
Sbjct: 3539 DFHLGNNGNGDVLDIGELLQGVESTGQLIHGGFLNLQIDKVDKDTGSATVTLSIDRDGRD 3598
Query: 382 SMKH 385
H
Sbjct: 3599 GHAH 3602
>gi|254501413|ref|ZP_05113564.1| Matrixin family [Labrenzia alexandrii DFL-11]
gi|222437484|gb|EEE44163.1| Matrixin family [Labrenzia alexandrii DFL-11]
Length = 378
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 63/194 (32%), Gaps = 47/194 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
+ ++ + D +PN Q+ R A W++V +++F E + S
Sbjct: 55 GEVTWSFATTTLIGTTGGTAYASDAAITDPNFQQAVRQAFDVWAQVANISFREVTDSSST 114
Query: 80 K----------------FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+ F S + + +++ FD A+ W T
Sbjct: 115 QIRFAMDAIDGVSNTLGFADSRFSSLDGGNTFTTDSVQVIFDTAESWTT-----TAFLST 169
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A+HEIGHALG+ H N V+ +Y
Sbjct: 170 AIHEIGHALGIGHSEDPNAIMTAVVVNENYGTSLTQ------------------------ 205
Query: 184 MVSDIVAVQKIYGA 197
DI AVQ IYGA
Sbjct: 206 --DDINAVQAIYGA 217
>gi|330965204|gb|EGH65464.1| Ig family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 559
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 75/224 (33%), Gaps = 13/224 (5%)
Query: 164 SYFMPQDSMMDASFGYCATP--MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
SY +P + D G T ++D A+ + + + S T
Sbjct: 119 SYSVPAGAFTDPDSGDTMTYAATLADGSAL-----PSWLTFNTSTRQFTGTAPTSAIGTT 173
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
D LT + + + + + G + T+ + +++ G++GND +I
Sbjct: 174 SVKVTAKDKSGLTGSDVLDIVVTVQNLTLTGTSGVD---TLTGRSGNDTLSGAAGNDTLI 230
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN+ N+ +GND G G DT+ + S E V + ++V
Sbjct: 231 GNAGNDRLDGGTGNDTMRGGIGSDTYVVDSASDAVTENAGEGIDTVESSVTLTLG--ANV 288
Query: 342 ERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMK 384
E L + + L ++ L G D +
Sbjct: 289 ENLTLTGTSALNGTGNALDNALVGNSAVNTLTGGAGNDRLDGKG 332
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 17/186 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYEK 258
G +G++ Y ++ G D ++ + + N +L S++ G
Sbjct: 249 GGIGSDTYVVDSASDAVTEN----AGEGIDTVESSVTLTLGANVENLTLTGTSALNGT-- 302
Query: 259 NMTIAQHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+++ VG+S + + G + N+ G D G +G D + S
Sbjct: 303 ------GNALDNALVGNSAVNTLTGGAGNDRLDGKGGADKLVGGAGNDIYVVDNASDTLT 356
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIG 376
E V + +++E L S ++L A+ L G
Sbjct: 357 ENANEGIDTVESSLTWTLG--NNLENLTLIGTSAISGTGNALANVLTGNAAGNSLGGGAG 414
Query: 377 QDVFES 382
D +
Sbjct: 415 NDTLDG 420
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 25/158 (15%)
Query: 215 DSPFIQTIYDSGGDDLLDLTL-----IGGVKNYI--------DLNTESWSSIGGYEKNMT 261
+ + T+ G+D LD +GG N I L + I E ++T
Sbjct: 312 GNSAVNTLTGGAGNDRLDGKGGADKLVGGAGNDIYVVDNASDTLTENANEGIDTVESSLT 371
Query: 262 IAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+E+ + +GN +V+ GN+A N +GND DG G DT
Sbjct: 372 WTLGNNLENLTLIGTSAISGTGNALANVLTGNAAGNSLGGGAGNDTLDGQGGADTLTGGT 431
Query: 312 PSYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFA 347
+ Y + R + D+ D +S ++ +
Sbjct: 432 GNGTYLLGRGYGVDTLVENDSTSANTDVVSFLDGIAAD 469
>gi|211970994|dbj|BAG82826.1| hypothetical protein [Pasteurella pneumotropica]
Length = 711
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 13/182 (7%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+I G + + ++ + G++GND + G+ N+ F GND+ +G G D
Sbjct: 370 STITGNNGDNILKGNSGNNILYGNNGNDTLFGDLGNDKLFGGKGNDILEGGKGDDYLEGG 429
Query: 311 APSYLYKI-YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+YK + N I+ K +E + + L + +
Sbjct: 430 EGDDIYKFNFNDGNDTIIDSKGSDKIILGKGIEL-----EKTYFKLENNKLTLSFIDTNA 484
Query: 370 DLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ G ++ + +I F S YL +YDD+ ++ +++ Y
Sbjct: 485 SVSIDRGYKKRRLSKKYDYFNKSI----NINFHSGHYL-NYDDILDIIKNNQVKNIVKYE 539
Query: 428 TH 429
+
Sbjct: 540 LY 541
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFD--GSSGLDTFFYYAPSY 314
+++G G D + GNS NN SG+DV+ G+ G DT + A +
Sbjct: 553 TLIGDIGKDFLQGNSKNNHLEGKSGSDVYYFSGAIGNDTIYDEAGND 599
Score = 41.3 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 67/188 (35%), Gaps = 57/188 (30%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDD-------------LLDLTLIGGVKNYIDLNTES 249
G++IYK + TI DS G D L ++ID N S
Sbjct: 431 GDDIYKFNFNDGND----TIIDSKGSDKIILGKGIELEKTYFKLENNKLTLSFIDTNA-S 485
Query: 250 WSSIGGYEK------------NMTIAQHT-----------VIES---------------V 271
S GY+K ++ I H+ +I++ V
Sbjct: 486 VSIDRGYKKRRLSKKYDYFNKSININFHSGHYLNYDDILDIIKNNQVKNIVKYELYDKKV 545
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDA 330
+ SS + +IG+ + +S N+ +G SG D +++ IY N I +D
Sbjct: 546 LSSSESTTLIGDIGKDFLQGNSKNNHLEGKSGSDVYYFSGAIGNDTIYDEAGNDKIYFDE 605
Query: 331 NEHKQDFL 338
+ + +D L
Sbjct: 606 SFYGRDIL 613
>gi|283837835|ref|NP_001164610.1| interstitial collagenase [Oryctolagus cuniculus]
gi|116855|sp|P13943|MMP1_RABIT RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Flags: Precursor
gi|164888|gb|AAB88016.1| collagenase-1 precursor [Oryctolagus cuniculus]
Length = 468
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 58/195 (29%), Gaps = 49/195 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 107 RWEQTHLTYRIENYTPDLSRADV-------DNAIEKAFQLWSNVTPLTFTKVSKGQADIM 159
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F +++FD+ D W + L A HE
Sbjct: 160 ISFVRGDHRDNSPFDGPEGQLAHAFQPGLGIGGDVHFDEDDRWTKDF-RNYNLYRVAAHE 218
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M + F D
Sbjct: 219 LGHSLGLSHSTDIGA-------------------LM--------YPNYMFSGDVQLAQDD 251
Query: 188 IVAVQKIYGAPKGSL 202
I +Q IYG +
Sbjct: 252 IDGIQAIYGPSQNPS 266
>gi|301773292|ref|XP_002922059.1| PREDICTED: stromelysin-1-like [Ailuropoda melanoleuca]
gi|281341732|gb|EFB17316.1| hypothetical protein PANDA_011004 [Ailuropoda melanoleuca]
Length = 477
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 58/198 (29%), Gaps = 48/198 (24%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ AL W +V LTF + +DIK
Sbjct: 108 RWRKTHLTYRIMNYMLDLPR-------DAVDSAIEKALSLWEEVTPLTFSKADDGEADIK 160
Query: 81 FIS-----------SNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ G V Y + + +FD + W GT L A HE
Sbjct: 161 ILFAVRDHGDFIPFDGPGKVLAHAYPPGPGIYGDAHFDDDEPWTRDT-SGTNLFLVAAHE 219
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+GH+LGL H YPVY D
Sbjct: 220 LGHSLGLFHSADPRALMYPVYNARTDLARLRLS-------------------------QD 254
Query: 187 DIVAVQKIYGAPKGSLGN 204
D+ +Q +YG+P S +
Sbjct: 255 DVAGIQSLYGSPSVSPDD 272
>gi|72383239|ref|YP_292594.1| peptidyl-prolyl cis-trans isomerase [Prochlorococcus marinus str.
NATL2A]
gi|72003089|gb|AAZ58891.1| putative Peptidyl-prolyl cis-trans isomerase (rotamase) -
cyclophilin family [Prochlorococcus marinus str. NATL2A]
Length = 595
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 61/371 (16%), Positives = 108/371 (29%), Gaps = 48/371 (12%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQT--IYDSGGDDLLDLTLIGGVKNYIDLNTES 249
Q Y +G NI ++ + + I + + +KN ++ +
Sbjct: 232 QSKYNVNYNEVGLNIPELPLNNVEGNVINNTNYFAIHSISTIS-QRPSEIKNVFNVIVTA 290
Query: 250 WSSIGGYEKNMTIAQHTVI--ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G I I E + G G D + G N+ F + GND DG + D
Sbjct: 291 NDTNGNQSNQYVIVNVKDIQGEVLNGIDGQDALNGGLGNDTFQGNGGNDTIDGGNDFDIA 350
Query: 308 FYYAPSYLYKIYRFENAIIVYDANE---HKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
Y Y + + D D L+++E+L FAD+ + + + I
Sbjct: 351 IYTGNFSDYTFTIANKILTISDNRSLINDGIDTLTNIEKLTFADKNALITSKEIKPIDAL 410
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
E + G+ ++ Y + G D
Sbjct: 411 GFQAERVYS--------------------GKSDSYKFYDLGSDNYGVGTSTGIDELT--- 447
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
G + F + + D+ F L F + R D
Sbjct: 448 ---------GESILKFDDKK-MNLKNDIKATFDQVTGLDTDSGKMFRLYNASFKRLPDPD 497
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
Y S + D A A ++ + R + Y+ + IN
Sbjct: 498 GLRYWISN---FSSGKDDERAVASSFLASAEFKERYGEDVSNESYV--NTLYINVLGRDY 552
Query: 545 DLVQAGKDHFS 555
D Q+G D++
Sbjct: 553 D--QSGYDYWL 561
>gi|116860|sp|P03957|MMP3_RAT RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; AltName: Full=PTR1
protein; AltName: Full=Transin-1; Flags: Precursor
gi|57461|emb|CAA26448.1| unnamed protein product [Rattus norvegicus]
Length = 475
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 61/195 (31%), Gaps = 54/195 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W I Y+ T + AL W +V LTF S +DI
Sbjct: 107 WRKNHISYRIVNYTLDLPRESV-------DSAIERALKVWEEVTPLTFSRISEGEADIMI 159
Query: 82 ISS-----------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ + Y P + + +FD + W + GT L A
Sbjct: 160 SFAVEEHGDFIPFDGPGMVLAHAYAPGPGTNG----DAHFDDDERWTDDV-TGTNLFLVA 214
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H + +M Y + + S A F
Sbjct: 215 AHELGHSLGLFHSANAEA-------------------LM-YPVYKSSTDLARFHLSQ--- 251
Query: 185 VSDIVAVQKIYGAPK 199
D+ +Q +YG P
Sbjct: 252 -DDVDGIQSLYGPPT 265
>gi|324507836|gb|ADY43312.1| Matrix metalloproteinase-24 [Ascaris suum]
Length = 486
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 46/204 (22%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS- 74
+ + YW + Y+ T + A++V R A W + L F+ S
Sbjct: 105 YAIEGSYWGVRNVTYRIGKYTHSMSGY-------EARKVMRRAFKVWEEFSPLRFQYKSR 157
Query: 75 --IHSDIKFI---------SSNNGYVCTPRYDSRYFMEINFDKADVWRYG--IGKGTILS 121
++ +I F G + + R+ +++FD+ ++W IG G L
Sbjct: 158 GPVNIEIIFARRAHGDGEPFDGKGQILAHAFFPRFGGDVHFDEEELWSPSKSIGHGIDLY 217
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A+HEIGH+LGL H ++ + Y+ +S
Sbjct: 218 AVAVHEIGHSLGLKHSQNHEAIMAPFYQ--TYDGNSLH---------------------- 253
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNN 205
D+ A+ +YG NN
Sbjct: 254 -LQKDDMRALVHLYGTSDLRFENN 276
>gi|220926111|ref|YP_002501413.1| G-D-S-L family lipolytic protein [Methylobacterium nodulans ORS
2060]
gi|219950718|gb|ACL61110.1| lipolytic protein G-D-S-L family [Methylobacterium nodulans ORS
2060]
Length = 688
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 4/116 (3%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + I G N + + G +G D + G + ++ + +D G +G DT +
Sbjct: 254 AVTDITGSTYNDLLTGDGRANHLTGGNGYDWLSGGAGDDQLDGGADDDTIVGGAGTDTAY 313
Query: 309 YYAPSYLYKIYRFENAII----VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y Y I R + + D L VER +F DQ I V
Sbjct: 314 YVGNRSDYAITRLADGSYEVRDLRGGAPSGTDTLISVERAQFDDQTIQLDGVAGPG 369
>gi|33413788|gb|AAN37599.1| collagenase 3 [Ambystoma mexicanum]
Length = 223
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 62/193 (32%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHS 77
R+ WS+Y + Y+ + T ++ + A WS+V L F S +
Sbjct: 29 RNLKWSHYNLTYRIENYTPDMTHAEV-------DRAIKKAFRVWSEVTPLNFTRLRSGTA 81
Query: 78 DIKFISSN------NGYVCTPRYDSRYFM-------EINFDKADVWRYGIGKGTILSHNA 124
DI + + F + +FD + + G G L A
Sbjct: 82 DIMISFGTREHGDFYPFDGPDGLLAHAFPPGKRIGGDTHFDDDETFTSGSN-GYNLFIVA 140
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GHALGL H S + V SY P ++
Sbjct: 141 AHEFGHALGLDHSRDPG---------------SLMYPVYSYLEPSKFLLP---------- 175
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 176 DDDVQGIQSLYGP 188
>gi|114761544|ref|ZP_01441459.1| VCBS [Pelagibaca bermudensis HTCC2601]
gi|114545792|gb|EAU48794.1| VCBS [Roseovarius sp. HTCC2601]
Length = 3409
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 12/190 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
GN+ + + + GG +D++ + G + ID + S + G N
Sbjct: 181 GNDTIQDSGSYDYNNGNLSYDLRGGAGNDIVRGSSYG---DTIDGGADDDS-LAGNSGND 236
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL----DTFFYYAPSYLY 316
++ T +++ G + +D + G + +++ G+D+ DG SG D + Y
Sbjct: 237 SMTGGTGDDTLSGGNDDDTLEGEAGDDILQGDRGDDLLDGGSGGETNGDVAQFTGVRANY 296
Query: 317 KIYRFENAI--IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I +V A + D +S+VE LRF+D I + + TA + L
Sbjct: 297 LILDNGGGTLRVVDRAGTYGDDTVSNVETLRFSDGDIAVSGLALGAASAGTAGGDSLDGT 356
Query: 375 IGQDVFESMK 384
G D + +
Sbjct: 357 SGDDSIDGLA 366
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 64/355 (18%), Positives = 113/355 (31%), Gaps = 47/355 (13%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ ++ S + + D+ + N D + G ++L E+G L
Sbjct: 699 TNPGTNFTGTSGADTFEGGEGDDTATGLGGN----DTFNGNGGNDSLLGGADSDELGGGL 754
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G +YG D D + SY +DS D+ V D
Sbjct: 755 GNDFLSGGTENDTLYGDDGDDTLEGGDGDDYSYNSGRDSGDDSIDMGAGDDTVYDADGNN 814
Query: 193 KIYG-------------APKGSLGNNI--YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ G + G G++ Y + T+ G+D +
Sbjct: 815 TVLGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDAVNARNVTVEGGDGNDTIQDHGSY 874
Query: 238 GVKN---YIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
N DL + + + G TI +S+ G++GND + G + N+ +
Sbjct: 875 DYNNGNLSYDLRGGAGNDTVRGSSYGDTIDGGADDDSLAGNNGNDSMTGGTGNDSMSGGT 934
Query: 294 GNDVFDGSSGLDTFFYYAPSYL----------------------YKIYRFENAI--IVYD 329
G+D +G G DT + Y I +V
Sbjct: 935 GDDTLEGGDGDDTLVGDQGNDSLDGGSGGETSGDVAQFSGDRSNYLILDNGGGTLRVVDR 994
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D +S+VE LRF D + + +I+ T + L G D +++
Sbjct: 995 TGTYGDDTVSNVETLRFGDGDVAVSGLTLGTIVTGTPGADSLDGTAGDDSIDALA 1049
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 19/197 (9%)
Query: 203 GNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
GN+ + + + G+D + + G + ID + S + G +
Sbjct: 1213 GNDTIQDHGSYDYNNGNLSYDLRGGAGNDTVRGSSYG---DTIDGGADDDS-LAGNNGDD 1268
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVF----FESSGNDVFDGSSGL-------DTFFY 309
TI T +S+ G++GND ++G +++F + +G+D DG + D Y
Sbjct: 1269 TIFGGTGDDSLEGNNGNDSLLGGDGDDIFHQNAYSGTGDDTIDGGADNSGSGSDGDVAVY 1328
Query: 310 YAPSYLYKIYRFENA--IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y I +I N D + +VERLRFAD + N S++ +
Sbjct: 1329 RGNRGDYSIVGTATGLQVINLTGNGDGTDVVYNVERLRFADGDVVVANGLTGSLVTGSPG 1388
Query: 368 YEDLIQVIGQDVFESMK 384
+ L+ I D E
Sbjct: 1389 DDSLVGTILNDTIEGYA 1405
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 64/203 (31%), Gaps = 26/203 (12%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
GN+ + + + GG +D + + G + ID + S + G N
Sbjct: 530 GNDTIQDSGSYDYNNGNLSYDLRGGAGNDTVRGSSYG---DTIDGGADDDS-LAGNSGND 585
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--- 317
++ T +S+ G + +D + G ++ +GND G +GLD +
Sbjct: 586 SMTGGTGNDSMSGGNDDDTLEGGDGDDTLRGDNGNDSLLGGAGLDALYGGNGDDTIDGGT 645
Query: 318 ----------------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
A+ D ++ V LRF DQ + +
Sbjct: 646 PGGGGDIAYFNSARAGFTITTGALGEATVVGEGTDIITGVSILRFTDQDVVIGTNPGTN- 704
Query: 362 LEYTASYEDLIQVIGQDVFESMK 384
T+ + G D +
Sbjct: 705 FTGTSGADTFEGGEGDDTATGLG 727
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI + V+G SG+D++ G S + F ++GND G G DT F A
Sbjct: 3274 LRGNGGNDTIFGGDDDDIVLGGSGDDLIKGQSGEDRLFGNAGNDTIIGGDGNDTIFGGAG 3333
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
L + F + + + +SD +
Sbjct: 3334 DDLL-VGGFGSDEFRFKSGSTGASRISDFDM 3363
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 2/136 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +I +S+ G G D+V G+ ++ +G D G +G D+ +
Sbjct: 1053 TVNGLAGNDSINGDEDADSISGGDGADIVNGDDGDDTLEGDAGTDSLFGGAGDDSVVGGS 1112
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + D N++ D D + + ++ + + + +
Sbjct: 1113 DDDTLYGDDGNDTLEGGDGNDYSYDGNRDSGDDSIDMGAGDDTILDQEGNNTVLGGDGND 1172
Query: 370 DLIQVIGQDVFESMKH 385
L V G+ +
Sbjct: 1173 RLWYVSGESIDGGTGD 1188
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 2/136 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N ++ +S+ G G+D+V G ++ +G D G +G D+
Sbjct: 370 TINGLGGNDSLNGDADADSISGGDGSDIVNGGDGDDTLEGDAGTDSLFGGAGDDSVVGGT 429
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + D N++ D D + + + + + + +
Sbjct: 430 EDDTLYGDDGNDTLEGGDGNDYSYDSTRDTGDDSIDMGAGDDTVYDAEGNNTILGGDGND 489
Query: 370 DLIQVIGQDVFESMKH 385
L V G+ +
Sbjct: 490 RLWYVSGESIDGGTGD 505
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 1/127 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + + I ++V+G +G+D + G N++ + GND G +G D+ F A
Sbjct: 3192 SVKGNDGDDRILAGAGDDTVIGGAGDDTLAGGGGNDLLNGNVGNDKLLGGTGDDSLFGGA 3251
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ +A + + D + +++ + + L
Sbjct: 3252 GDDTAS-GGTGADVVRGNAGNDLLRGNGGNDTIFGGDDDDIVLGGSGDDLIKGQSGEDRL 3310
Query: 372 IQVIGQD 378
G D
Sbjct: 3311 FGNAGND 3317
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D+ + G I T S+ G + +I ++V G +GND + G+ +
Sbjct: 1015 DVAVSGLTLGTIVTGTPGADSLDGTAGDDSIDALAGDDTVNGLAGNDSINGDEDADSISG 1074
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G D+ +G G DT A + F A D L
Sbjct: 1075 GDGADIVNGDDGDDTLEGDAGTDSL----FGGAGDDSVVGGSDDDTLYG 1119
Score = 45.1 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 51/158 (32%), Gaps = 11/158 (6%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ G D + ++++ + + T ++ G T ++ G GND
Sbjct: 673 TVVGEGTDIITGVSILRFTDQDVVIGTNPGTNFTGTSGADTFEGGEGDDTATGLGGNDTF 732
Query: 281 IGNSANNVFFESS---------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY--D 329
GN N+ + GND G + DT + + ++ D
Sbjct: 733 NGNGGNDSLLGGADSDELGGGLGNDFLSGGTENDTLYGDDGDDTLEGGDGDDYSYNSGRD 792
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + D + + + AD + L Y +
Sbjct: 793 SGDDSIDMGAGDDTVYDADGNNTVLGGDGNDRLWYVSG 830
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 4/119 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG+D + GG + I L I G + + ++++G GND + G +
Sbjct: 3277 NGGNDTI----FGGDDDDIVLGGSGDDLIKGQSGEDRLFGNAGNDTIIGGDGNDTIFGGA 3332
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+++ G+D F SG + + + + + D L ++
Sbjct: 3333 GDDLLVGGFGSDEFRFKSGSTGASRISDFDMAQDQINAGGVALASVVAVGSDALVTLDN 3391
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 2/115 (1%)
Query: 195 YGAPKGSLGNN--IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
Y G G + Y I + D + + GG + ++ +
Sbjct: 3106 YTPDAGFTGTDSFTYTIRDGNGGTATATVTMDVNATATGGVDVSGGSGSDGLTGSDGDDT 3165
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
I G+ + I + V G SG D V GN ++ +G+D G +G DT
Sbjct: 3166 INGFGGDDIIFGGDGDDDVKGGSGEDSVKGNDGDDRILAGAGDDTVIGGAGDDTL 3220
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 52/179 (29%), Gaps = 23/179 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ DD L + + I+ + I + N ++ +SV G +GND +IG+S
Sbjct: 7 TSNDDTLPGSN---SDDTINGLAGNDI-INALDGNDSVEAGAGNDSVEGDAGNDTLIGDS 62
Query: 285 A------------------NNVFFESSGNDVFDGSSGLD-TFFYYAPSYLYKIYRFENAI 325
+ + GND G G D ++ S I
Sbjct: 63 GVDILHGGDGDDSIDGGTEGDTLYGDDGNDTILGGDGNDYSYDSNRDSGDDSIDMGAGDD 122
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
VYDA + D + + Y + D + V
Sbjct: 123 TVYDAEGNNTVLGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDAVNARNVTVEGGDG 181
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 60/203 (29%), Gaps = 31/203 (15%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + +++ GDD + D TL G N D + Y+ N +
Sbjct: 1087 DDTLEGDAGTDSLFGGAGDDSVVGGSDDDTLYGDDGN--DTLEGGDGNDYSYDGN----R 1140
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--------GSSGLDTFFYYAPSYLY 316
+ +S+ +G+D ++ NN GND G +G D+ YY
Sbjct: 1141 DSGDDSIDMGAGDDTILDQEGNNTVLGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDA 1200
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
NA V D + D D N L A + +
Sbjct: 1201 V-----NARNVTVEGGDGNDTIQD-------HGSYDYNNGNLSYDLRGGAGNDTVRGSSY 1248
Query: 377 QDVFESMKHFYEFGLSEGRDITF 399
D + + G D F
Sbjct: 1249 GDTIDGGADDDSLAGNNGDDTIF 1271
Score = 41.3 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 56/198 (28%), Gaps = 26/198 (13%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ G+ +Y + TI G+D + + ID+ + N
Sbjct: 80 TEGDTLYGDDGND-------TILGGDGNDYSYDSNRDSGDDSIDMGAGDDTVYDAEGNNT 132
Query: 261 TIAQH-------TVIESVVGSSGNDVV----IGNSANN----VFFESSGNDVFDGSSGLD 305
+ ES+ G +G+D + N A N GND S D
Sbjct: 133 VLGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDAVNARNVTVEGGDGNDTIQDSGSYD 192
Query: 306 TFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
Y + Y + N I+ + D +D + L L
Sbjct: 193 ---YNNGNLSYDLRGGAGNDIVRGSSYGDTIDGGADDDSLAGNSGNDSMTGGTGDDTLSG 249
Query: 365 TASYEDLIQVIGQDVFES 382
+ L G D+ +
Sbjct: 250 GNDDDTLEGEAGDDILQG 267
Score = 41.3 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 47/139 (33%), Gaps = 12/139 (8%)
Query: 231 LDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L +L+ G L + I GY N TI + + G+D + N+
Sbjct: 1378 LTGSLVTGSPGDDSLVGTILNDTIEGYAGNDTIVALAGEDDIDAGDGDDTIEAGEQNDTV 1437
Query: 290 FESSGNDVFDGSSGL---------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G+D G G DT + Y I +A V D L++
Sbjct: 1438 DAGAGDDTIRGGGGDDSIDGGTGTDTAVFSGDLADYTITGDGSASTVT--GPDGTDVLTN 1495
Query: 341 VERLRFADQCIDSVNVKQR 359
V L+F DQ N Q
Sbjct: 1496 VRVLQFDDQSYAFNNAPQP 1514
Score = 40.5 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 8/181 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--LLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G G Q I D+GG ++D G ++ T +S
Sbjct: 276 GGSGGETNGDVAQFTGVRANYLILDNGGGTLRVVDRAGTYGDDTVSNVETLRFSD----- 330
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++ ++ + + G++G D + G S ++ +G+D +G G D+ A +
Sbjct: 331 GDIAVSGLALGAASAGTAGGDSLDGTSGDDSIDGLAGDDTINGLGGNDSLNGDADADSIS 390
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + D ++ + + + L V + L + L G
Sbjct: 391 GGDGSDIVNGGDGDDTLEGD-AGTDSLFGGAGDDSVVGGTEDDTLYGDDGNDTLEGGDGN 449
Query: 378 D 378
D
Sbjct: 450 D 450
Score = 40.5 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 53/199 (26%), Gaps = 24/199 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + +++ GDD + + Y D ++ G + + + T +
Sbjct: 404 DDTLEGDAGTDSLFGGAGDDSV-VGGTEDDTLYGDDGNDTLEGGDGNDYSYDSTRDTGDD 462
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFD--------GSSGLDTFFYY----------- 310
S+ +G+D V NN GND G +G D+ YY
Sbjct: 463 SIDMGAGDDTVYDAEGNNTILGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDAVNARN 522
Query: 311 ----APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
I + + + + +R + L +
Sbjct: 523 VTIEGGDGNDTIQDSGSYDYNNGNLSYDLRGGAGNDTVRGSSYGDTIDGGADDDSLAGNS 582
Query: 367 SYEDLIQVIGQDVFESMKH 385
+ + G D
Sbjct: 583 GNDSMTGGTGNDSMSGGND 601
Score = 40.1 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + T+ +++ G +GND++ N+ +GND +G +G DT +
Sbjct: 4 FTGTSNDDTLPGSNSDDTINGLAGNDIINALDGNDSVEAGAGNDSVEGDAGNDTLIGDSG 63
Query: 313 SYL 315
+
Sbjct: 64 VDI 66
>gi|115496540|ref|NP_001068598.1| matrilysin [Bos taurus]
gi|109939761|gb|AAI18076.1| Matrix metallopeptidase 7 (matrilysin, uterine) [Bos taurus]
Length = 267
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 76/214 (35%), Gaps = 48/214 (22%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A+ L + W++ + Y+ T+ + +L VA+ A W
Sbjct: 84 KPRSGVPDVAEFSLFPNHPKWTSKVVTYRIMSYTSDLPHITVNQL------VAK-AFKIW 136
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
S+ + LTF+ +DI + + +D + +FD+ +
Sbjct: 137 SEAIPLTFKRLRWGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGGDAHFDEDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W GIG G + A HE+GH+LGL H N VM P
Sbjct: 197 RWTDGIGIGVNFLYVATHELGHSLGLSHSSDPNA-------------------VM---YP 234
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S D+ + DI +Q +YG S
Sbjct: 235 TYSKEDSKNFKLSQ---DDINGIQLLYGKRNDSR 265
>gi|330890708|gb|EGH23369.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 521
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 2/153 (1%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G N + ++ G N T + +++ G +GND++ G + N+ +
Sbjct: 135 DETLSGTSGNDVISAGAGDDTVNGGSGNDTFSGGAGADTLNGDAGNDLLQGGAGNDTLYG 194
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQ 349
GNDV DG +G D Y + +Y ANE + L V+ L +D
Sbjct: 195 GDGNDVLDGGAGNDQLNGGDGDDTYLFGKGAGQDTIYYANEARVGKLDTVKLADLNVSDV 254
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I + + T ++ +D
Sbjct: 255 SITRDSSDLLIRVNGTTDNLRVMNHFAEDATSG 287
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G ++ I+ + G GND + G + N+ + SGNDV +G +G D+
Sbjct: 337 TVSGGAGKDSLYGGKGIDMLYGEEGNDRLYGEAGNDTLYGGSGNDVLNGGTGNDSLIGGD 396
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
S +Y+I ++ + D S + L+F
Sbjct: 397 GSDIYEISIGSGRDVI-----NNYDVSSGTDVLQFG 427
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 41/200 (20%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+T+ + G+D++ G + ++ + + + G T+ + + G +GND
Sbjct: 136 ETLSGTSGNDVI---SAGAGDDTVNGGSGND-TFSGGAGADTLNGDAGNDLLQGGAGNDT 191
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII------------- 326
+ G N+V +GND +G G DT+ + + IY A +
Sbjct: 192 LYGGDGNDVLDGGAGNDQLNGGDGDDTYLFGKGAGQDTIYYANEARVGKLDTVKLADLNV 251
Query: 327 ----------------------VYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSIL 362
+ N +D S +++L+FAD + S + + +L
Sbjct: 252 SDVSITRDSSDLLIRVNGTTDNLRVMNHFAEDATSGYQIDQLQFADGTLWSQSTIKSQVL 311
Query: 363 EYTASYEDLIQVIGQDVFES 382
+S + L DV +
Sbjct: 312 LGNSSDQTLRGYASDDVINA 331
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
G +GND + G N+ +GND DG G DT+ + + IY
Sbjct: 3 GGAGNDSLSGGVGNDSLDGGAGNDQLDGGEGDDTYLFGKGAGQDTIY 49
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
++G + N+ GND DG +G D Y + +Y A E+++ L
Sbjct: 1 MLGGAGNDSLSGGVGNDSLDGGAGNDQLDGGEGDDTYLFGKGAGQDTIYYAYENREGKL 59
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 54/195 (27%), Gaps = 29/195 (14%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYI-----DLNTESWSSIGGY 256
G++ Y + G D + LT + + DL S
Sbjct: 33 GDDTYLFGKGAGQDTIYYAYENREGKLDTIKLTDLNASDVSVRRDGNDLIIRVLGSTDSL 92
Query: 257 EKNMTI----AQHTVIESVVGSSGN---------DVVIGNSANNVFFESSGNDVFDGSSG 303
A I+ +V + G+ V+ G+ ++ +SGNDV +G
Sbjct: 93 RVVYHFQSDAAGGYQIDRLVFADGSVWDQTQIKSQVLQGSDSDETLSGTSGNDVISAGAG 152
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + + A + D L +L+
Sbjct: 153 DDTVNGGSGNDTFS----GGAGADTLNGDAGNDLLQG------GAGNDTLYGGDGNDVLD 202
Query: 364 YTASYEDLIQVIGQD 378
A + L G D
Sbjct: 203 GGAGNDQLNGGDGDD 217
>gi|73955230|ref|XP_546548.2| PREDICTED: similar to matrix metalloproteinase 27 [Canis
familiaris]
Length = 512
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 63/190 (33%), Gaps = 48/190 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ + + L WS V LTF + S +DI
Sbjct: 106 WRKYNLTYRIVNYTPDMARVDVDK-------AIQNGLEVWSGVTPLTFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRYDSRYFM--------------EINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGWCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDEDWTKD-GAGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D + + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPNKYPLSQ---DD 252
Query: 188 IVAVQKIYGA 197
I +Q IYG+
Sbjct: 253 INGIQSIYGS 262
>gi|95930808|ref|ZP_01313540.1| Hemolysin-type calcium-binding region [Desulfuromonas acetoxidans
DSM 684]
gi|95133156|gb|EAT14823.1| Hemolysin-type calcium-binding region [Desulfuromonas acetoxidans
DSM 684]
Length = 12388
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 22/166 (13%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---WSSIGGYEKN 259
G+ + ++ I+ + G D + ID + Y +
Sbjct: 385 GSVTIADSTFELNATGIENLIGGTGSDCFVFEAGAVLPGTIDGTSGETDNLLDYSAYTTS 444
Query: 260 MTI---------AQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + A I+ V+G S NDV+IG+ + N +GNDV G SG DT
Sbjct: 445 VAVDLESGTLTGASGVSRIQHVIGGSANDVLIGDDSANELTGGAGNDVLLGGSGDDTLSG 504
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFL-----SDVERLRFADQC 350
A + D L SD+ +AD
Sbjct: 505 GAGDDQLS----GGDGVDALDGGDGVDTLTEQQDSDISLYDYADST 546
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 13/172 (7%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D I I SGG ++ + + G DL + ++ + + VI +
Sbjct: 1565 NSDGTGINLIDSSGGSQVVSVVALNGAGAVDDLGLSTGTASTTGIEGTALVTGYVI--LD 1622
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G+D + G +++ G+D DG G DT + + + +V D
Sbjct: 1623 GGAGDDTLTGTIGDDIITGGLGSDTIDGGLGSDTLEESSTGD----FDLGDTSLVMD--- 1675
Query: 333 HKQDFLSDVERLRF----ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D LS +E A Q ID+ + + L + L+ G D F
Sbjct: 1676 GGTDTLSSIELATLTGGEAGQTIDAADFSGDTTLISGGGADTLLGGSGNDQF 1727
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 58/179 (32%), Gaps = 18/179 (10%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A+ ++G + N+ + V GG + ++ G N +D ++
Sbjct: 1207 ALTDLFGPWIITFTVNMAGMNVDDITCDAADLD---GGTLTVAISQGGQAANLLDSIEQA 1263
Query: 250 ---------WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ ++ + ++++G++G+D + GN+ + G+D+ DG
Sbjct: 1264 ELVGGISDNIMDASAFSGSVVLYGADGDDTLIGAAGDDELYGNAGFDTLTGGLGDDLIDG 1323
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
D N + D+ D L+ +E + +
Sbjct: 1324 GEDEDLL---MEQRDASTITLTNTSLTMDSES---DTLTGIEVAQLTGGASSNAIDASA 1376
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 5/143 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM-- 260
G++ + Q ++ GDD +D I + E N+
Sbjct: 11993 GDDQVIFDNQSPQEDGTVVVFGEAGDDTVDGANWQNDLILIGDDGEVVYDGEQMPDNLRR 12052
Query: 261 ---TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
I+ +++VG SG+DVVIG ++ + +SGND G SG T+ A Y +
Sbjct: 12053 VTSFISDGDGDDTLVGGSGHDVVIGGMGDDALYGNSGNDSLLGDSGQVTYDNNASLYQVE 12112
Query: 318 IYRFENAIIVYDANEHKQDFLSD 340
F D +
Sbjct: 12113 ATNFFVGGEDLLNGGSGNDIMFG 12135
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 64/204 (31%), Gaps = 23/204 (11%)
Query: 199 KGSLGNNIYKIE----------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
S + Y + TI G D LD + + +
Sbjct: 604 STSADDLTYTFSSLTDLVLSSTTNNMTVNDVTTIVGGSGYDTLDFSSLSDDLAMVIRADG 663
Query: 249 SWSSIGGY-----EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF---FESSGNDVFDG 300
S S G + +T++ +V+ + +S + +IG++ N F + + V DG
Sbjct: 664 SVSISDGSYTIEEDGTVTLSGGSVV---ITASEVNNLIGSNGNTTFVFEDGGAIDGVLDG 720
Query: 301 S-SGLDTFFYYAPSY-LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G + Y + + + D +S + + D + +
Sbjct: 721 GPGGTNLLDYSGCTDLNVYVNMISPDGDGSTGSASNTDGISRIHNVLAGDGDDEITGSDE 780
Query: 359 RSILEYTASYEDLIQVIGQDVFES 382
+I+ A + + G D ++
Sbjct: 781 ANIIITGAGDDTIYGGGGADTIDA 804
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 58/194 (29%), Gaps = 29/194 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-------NTESWSS 252
GS GN + E + GG +LLD + + Y+++ +T S S+
Sbjct: 699 GSNGNTTFVFEDGGAIDGVLDG--GPGGTNLLDYSGCTDLNVYVNMISPDGDGSTGSASN 756
Query: 253 IGG---------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------SSG 294
G + + I ++ +G+D + G + G
Sbjct: 757 TDGISRIHNVLAGDGDDEITGSDEANIIITGAGDDTIYGGGGADTIDAGAGDDILGGGDG 816
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D+ G G D + + ++ D L+D+E+ +
Sbjct: 817 VDILIGGEGTDLL--DEQLDATSMVLTDTSLTTVVGGVTTTDTLTDIEQAMLTGGDSVNT 874
Query: 355 NVKQRSILEYTASY 368
L A Y
Sbjct: 875 LDASAFTLGSVALY 888
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 52/177 (29%), Gaps = 29/177 (16%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G++G++I + TI G D L+ + G DL S GG +
Sbjct: 1631 TGTIGDDIITGGLGS------DTIDGGLGSDTLEESSTGD----FDLGDTSLVMDGGTDT 1680
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNS--ANNVFFESSGNDVFDGSSGLDTFFYYAPSYL- 315
+I T+ G + + G D G SG D F +
Sbjct: 1681 LSSIELATL----TGGEAGQTIDAADFSGDTTLISGGGADTLLGGSGNDQFRVDISNLDA 1736
Query: 316 ------------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y + + LS+++ + FAD S+ +
Sbjct: 1737 NDDGVKDEDEKVYVDVGGGSDNELVILGAGGNALLSNIDWIDFADTDGLSLTFSEED 1793
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 13/145 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+N+ ++ D T+ G D++ D L G N L S Y+
Sbjct: 12048 DNLRRVTSFISDGDGDDTLVGGSGHDVVIGGMGDDALYGNSGNDSLLGD---SGQVTYDN 12104
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N ++ Q + G D++ G S N++ F G+D F G D A Y
Sbjct: 12105 NASLYQ-VEATNFFVG-GEDLLNGGSGNDIMFGGYGHDTFYGDLSEDIM---AGEYARVT 12159
Query: 319 YRFENAIIVYDANEHKQDFLSDVER 343
+ + +QD ++ +
Sbjct: 12160 LEDGQVNTLIRLAQGRQDLIASTQF 12184
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 9/152 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
V + T+ GDD +DL G +D+ T+ S + VI+
Sbjct: 11596 TVTVGSNSGDMTLDSGSGDDQVDLFTNTG---TLDVQTQQGSDT---VHLYSTDGEVVID 11649
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ S ND + S E +G G G D + + +
Sbjct: 11650 T---GSENDTLTVGSLTATLDEINGPVTVIGGDGSDILVFDDSGDNSDNSGTLSEDTLSG 11706
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + E + A + +I
Sbjct: 11707 FDMGSPLSYTTFEDVTLALGSGNDDLTIASTI 11738
Score = 37.4 bits (85), Expect = 7.3, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 50/183 (27%), Gaps = 26/183 (14%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ Q + T+Y + G+D +++ ++ + G ++
Sbjct: 11863 SGNDT--FNTQSTLTGTSTTVYANDGNDTFNVSSDA---------PDNLGDLDGINGDLH 11911
Query: 262 IAQHTV-IESVVGSSGNDVVIGNSANNVFFESSG-NDVFDG----------SSGLDTFFY 309
+ + GND G + SG D DG G +
Sbjct: 11912 LDGGDGDNTLNISDRGNDS--GRTIVIDENGISGLGDSSDGAITFETSGTFGGGFNLALG 11969
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ I +++ D + + D + ++
Sbjct: 11970 DGDDDVTVIGAQTDSVTTLRVG-GGDDQVIFDNQSPQEDGTVVVFGEAGDDTVDGANWQN 12028
Query: 370 DLI 372
DLI
Sbjct: 12029 DLI 12031
>gi|304392834|ref|ZP_07374766.1| Ig family protein [Ahrensia sp. R2A130]
gi|303295002|gb|EFL89370.1| Ig family protein [Ahrensia sp. R2A130]
Length = 4355
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 70/188 (37%), Gaps = 15/188 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDL--NTESWSS 252
GA G+ I ++ + P D G + + GV ID N+ + S
Sbjct: 835 GADHIDGGDGIDTVDYSDQTDPGQAVNVDFQGIGSVTSSTGADGVSRQIDGSSNSGGFDS 894
Query: 253 IGGYEKNMTIAQHTVI-----ESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E + A + E+ + G SG+D++ G + ++VF SGND DG G D
Sbjct: 895 FDNIENIIGSAGGDTLSGDGGENRIEGGSGSDIISGRAGDDVFVGGSGNDTIDGGIGNDE 954
Query: 307 FFYYAPSYLYKIYRFENAIIVYDA------NEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y + + + A + ++ D +S E +RF D+ V
Sbjct: 955 VVYETGTAVDGMAVQTGATLTVNSAFGTAGGTEGTDTISQAETIRFQATGDDAFEVDASD 1014
Query: 361 ILEYTASY 368
I+ +
Sbjct: 1015 IVIDIDAN 1022
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND + S ++ +GND DG +G+D + Y I I+V N
Sbjct: 3341 DTGNDFIFAGSGDDTIAAGAGNDEIDGGTGVDVVIFSGERSEYTIELDGEDILVSGPN-- 3398
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D +S+VE RF+D +V++ +
Sbjct: 3399 GNDVISNVETFRFSDGMTGTVDLSTADLF 3427
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+ +G+D++IGNS NN+ G+D G G DT + +K+ AI
Sbjct: 774 IENATSGAGDDILIGNSGNNILDGGEGDDTLIGLEGADTLLGGDGNDTFKLGS--TAINN 831
Query: 328 YDANEHKQDFLSDVERLRFADQC 350
D ++ + ++DQ
Sbjct: 832 QGNGADHIDGGDGIDTVDYSDQT 854
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 36/124 (29%), Gaps = 6/124 (4%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKI 318
T + G++ ++ +IGN +N+ GND G +G D +
Sbjct: 4138 GTDNLNARGNALDNTIIGNDGDNMLVGVGGNDTIQGGAGNDILGADGASTLLGGTGNDTY 4197
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ A IV + D + D + + + G D
Sbjct: 4198 GVTDAATIVTELAGEGDDTVYASIDYVLGDNLEVLIMQMGATSATGNELNNQIYGTAGDD 4257
Query: 379 VFES 382
+
Sbjct: 4258 IING 4261
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + + TI + GD++L + T+ GG N I L + S++ G N
Sbjct: 4137 TGTDNLNARGNALDNTIIGNDGDNMLVGVGGNDTIQGGAGNDI-LGADGASTLLGGTGND 4195
Query: 261 T--IAQHTVIESVVGSSGNDVVI------------------------GNSANNVFFESSG 294
T + I + + G+D V GN NN + ++G
Sbjct: 4196 TYGVTDAATIVTELAGEGDDTVYASIDYVLGDNLEVLIMQMGATSATGNELNNQIYGTAG 4255
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCID 352
+D+ +G G D + ++ + E + A+ +E +A
Sbjct: 4256 DDIINGGDGQDFLEGSGGNDVFVFTQGEMDLDYISASFDGNGAGLGDSIEFTGYAAGATV 4315
Query: 353 SVNVKQRSILEY 364
+ Y
Sbjct: 4316 TQVAASAGGSVY 4327
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 11/186 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+IY ++ D G D+ D + + GG
Sbjct: 3992 SGGTGNDIYIVDDIGDTITE-----DVGAG--YDVVYTSATTTLGDNVEAAIVTTGGAVD 4044
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
++ G+SG++V+ G + N+ +GNDV DG +G+D +Y I
Sbjct: 4045 VTANDLDNIM---FGNSGDNVLRGLAGNDGIAAGAGNDVIDGGTGIDAMRGGDGDDVY-I 4100
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ ANE S V+ D ++ A +I G +
Sbjct: 4101 VDNIADVVSESANEGIDRVESSVDYTLSTDVENLTLTGTDNLNARGNALDNTIIGNDGDN 4160
Query: 379 VFESMK 384
+ +
Sbjct: 4161 MLVGVG 4166
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG+ D + G ++N+ + GND+ DG +G DT + +Y + + I
Sbjct: 3953 DLLVGTDYQDQLTGLASNDTLVGADGNDILDGGTGADTMSGGTGNDIYIVDDIGDTITED 4012
Query: 329 DA-------NEHKQDFLSDVE-RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+VE + +D +I+ + L + G D
Sbjct: 4013 VGAGYDVVYTSATTTLGDNVEAAIVTTGGAVDVTANDLDNIMFGNSGDNVLRGLAGNDGI 4072
Query: 381 ESMK 384
+
Sbjct: 4073 AAGA 4076
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA---- 324
+ + G +GND + G ++ GNDV G +G DT I N
Sbjct: 634 DRLQGGAGNDFIDGGDGDDRITLGDGNDVGLGGNGDDTIIAGMGGGNDYIDGGNNGALGD 693
Query: 325 IIVYDANEHKQDFLSD 340
+ Y + D + D
Sbjct: 694 TVTYPSITAATDMVVD 709
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 42/124 (33%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E ++G+ D+++G + + ND G+ G D + + IV
Sbjct: 3944 EQILGTPDPDLLVGTDYQDQLTGLASNDTLVGADGNDILDGGTGADTMSGGTGNDIYIVD 4003
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D + + + + + + + +I+ + + + +F +
Sbjct: 4004 DIGDTITEDVGAGYDVVYTSATTTLGDNVEAAIVTTGGAVDVTANDLDNIMFGNSGDNVL 4063
Query: 389 FGLS 392
GL+
Sbjct: 4064 RGLA 4067
>gi|29122671|dbj|BAC66058.1| matrix metalloproteinase [Crassostrea gigas]
Length = 599
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 30/160 (18%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS- 74
++L W++ + Y+ + T ++ + + A WS V DLTF E
Sbjct: 155 YVLAPSKWNHKDLTYRIENYTPDLPWQEVRRVLAD-------AFKVWSDVTDLTFTEVMH 207
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGK-GTIL 120
+DI ++ + +D + + + +FD+ + W + G L
Sbjct: 208 TSADIMIKFASKYHKDGYPFDGKGLILAHAFFPGKDKGGDTHFDEDEKWTINSNEEGVDL 267
Query: 121 SHNALHEIGHALGLMHPGS--------YNGGYPVYGVDND 152
A HE GHALGL H Y G P + + D
Sbjct: 268 FMVAAHEFGHALGLSHSNEPKALMYPWYQGYIPNFQLPYD 307
>gi|330977918|gb|EGH77821.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 781
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 6/145 (4%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
N + + D GG+D + L + LNT + + GG
Sbjct: 561 NSSGAANATGNALDNLIYAGAGDNVMDGRGGNDTVSY-LFATAGVTVALNTSAQQATGG- 618
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + T E+++GS D + GN N +GND G +G D + +
Sbjct: 619 -SGLDTLKGT--ENLIGSQFADTLTGNKNANTLSGGAGNDTLSGGAGDDVLIGGSGADTL 675
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV 341
+ + +++ L D+
Sbjct: 676 IGGTGADHYVFNGSSDTGLGGLRDI 700
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 72/196 (36%), Gaps = 13/196 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ ++ Q D G D D+ ++ + + + +S S +
Sbjct: 397 GHIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDT 456
Query: 256 YEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ +E+ + +GN +V+IGN++NN+ ++G D+ G G D
Sbjct: 457 VVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSD 516
Query: 306 TFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+++ + + + ++ +++E + + L
Sbjct: 517 SYYVDDAADRVVETNADAKVGGVDTVYSSLASYTLGANLENIVINSSGAANATGNALDNL 576
Query: 363 EYTASYEDLIQVIGQD 378
Y + ++++ G +
Sbjct: 577 IYAGAGDNVMDGRGGN 592
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 398 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 457
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFES 382
+ +++E L + +++ AS L G D+
Sbjct: 458 VSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTG 511
>gi|260431816|ref|ZP_05785787.1| bifunctional hemolysin/adenylate cyclase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415644|gb|EEX08903.1| bifunctional hemolysin/adenylate cyclase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 743
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 65/161 (40%), Gaps = 9/161 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D + G + ++ N + + G N + + + G GND V G S
Sbjct: 587 GGNDRI---YGGSGDDVLNGNVGTD-RLFGGAGNDKVFGGVGDDKLFGGGGNDSVSGGSG 642
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERL 344
N+ + +G D +G +G DT + + ++ E+ ++ + A + ++ +E
Sbjct: 643 NDSLYGGAGEDTLNGGTGNDTLRGDSQTDVFVFSEGEDQVLDFGAEDLIDLSGVAGIED- 701
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
F D D ++ ++++ + +IG D
Sbjct: 702 -FDDLLADHLSGGPEAVIDDGLGNT--LTLIGVDESALAAD 739
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 8/157 (5%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG+ N L I G + + + + + G +GND V G ++ F GND
Sbjct: 576 GGIGNDRLLGQGGNDRIYGGSGDDVLNGNVGTDRLFGGAGNDKVFGGVGDDKLFGGGGND 635
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G SG D+ + A + + + D +DV + +
Sbjct: 636 SVSGGSGNDSLYGGAGEDTLNGGTGNDTL--------RGDSQTDVFVFSEGEDQVLDFGA 687
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ L A ED ++ + + + GL
Sbjct: 688 EDLIDLSGVAGIEDFDDLLADHLSGGPEAVIDDGLGN 724
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 50/161 (31%), Gaps = 9/161 (5%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L GG N G + I + ++G GND + G S ++V + G
Sbjct: 547 LTGGGGNDRLFGEGGRDFAQGGLGHDMIRGGIGNDRLLGQGGNDRIYGGSGDDVLNGNVG 606
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-----KQDFL---SDVERLRF 346
D G +G D F +++ N+ +D L + + LR
Sbjct: 607 TDRLFGGAGNDKVFGGVGDDKLFGGGGNDSVSGGSGNDSLYGGAGEDTLNGGTGNDTLR- 665
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D D + EDLI + G E
Sbjct: 666 GDSQTDVFVFSEGEDQVLDFGAEDLIDLSGVAGIEDFDDLL 706
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 71/213 (33%), Gaps = 22/213 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-------------DLN 246
+L ++ IY G+D ++LT GG I DL
Sbjct: 319 ATLHDDTINFTT---GPDGYFQIYALAGNDTINLTGDGGTHVRISSDWWNMSSGMVADLG 375
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T S+ G+ + TI + S S +D VIG+ + +GND DG G D
Sbjct: 376 TGIISN-DGHGGSDTITGVEHVSSFRASMMDDSVIGSDGRDQIILMAGNDTADGGDGFDL 434
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDS--VNVKQRSILE 363
Y E I +S+ E +R + + D+ N LE
Sbjct: 435 LRYDRTGVEAVNVNLETGIATGIWRGEAFTHEISNFEEVRGSREGSDTIIGNDAVDEHLE 494
Query: 364 YTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
+ + + G DV S E G ++
Sbjct: 495 GSGGNDSISGGGGSDVLYGGSGADSLEGGSAKD 527
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 39/138 (28%), Gaps = 7/138 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N + G N +I+ + + G SG D + G SA + +G DV G G D
Sbjct: 486 NDAVDEHLEGSGGNDSISGGGGSDVLYGGSGADSLEGGSAKDHLHGGNGQDVLHGGIGFD 545
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSIL 362
+ F + D + +RL +L
Sbjct: 546 RLTGGGGNDRL----FGEGGRDFAQGGLGHDMIRGGIGNDRLLGQGGNDRIYGGSGDDVL 601
Query: 363 EYTASYEDLIQVIGQDVF 380
+ L G D
Sbjct: 602 NGNVGTDRLFGGAGNDKV 619
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I + GS+GND ++G ++ +G+D +G G D+ + A +
Sbjct: 177 NELITGDDTDNDLDGSAGNDTILGLDGDDWLVGYAGDDSLEGGEGSDSLYGGAGDD--YL 234
Query: 319 YRFENAIIVYDANEHKQDFLSDVER 343
+N Y D + +
Sbjct: 235 NPGDNTYYDYVVPGTGNDTVDFTDI 259
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 35/124 (28%), Gaps = 12/124 (9%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ I V E + GS GND + G ++V + SG D +G S D
Sbjct: 480 SDTIIGNDAVDEHLEGSGGNDSISGGGGSDVLYGGSGADSLEGGSAKDHLHGGNGQD--- 536
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIG 376
D L F + D ++ + L+ G
Sbjct: 537 -VLHGGIGFDRLTGGGGNDRL-------FGEGGRDFAQGGLGHDMIRGGIGNDRLLGQGG 588
Query: 377 QDVF 380
D
Sbjct: 589 NDRI 592
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 55/194 (28%), Gaps = 23/194 (11%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SGG+D ++ GG + + S+ G + + + G G D + G
Sbjct: 496 SGGND----SISGGGGSDVLYGGSGADSLEGGSAKDHLHGGNGQDVLHGGIGFDRLTGGG 551
Query: 285 ANNVFFE------------------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
N+ F GND G G D + + + + +
Sbjct: 552 GNDRLFGEGGRDFAQGGLGHDMIRGGIGNDRLLGQGGNDRIYGGSGDDVLNGNVGTDRLF 611
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
N+ + D ++L L A + L G D
Sbjct: 612 GGAGNDKVFGGVGD-DKLFGGGGNDSVSGGSGNDSLYGGAGEDTLNGGTGNDTLRGDSQT 670
Query: 387 YEFGLSEGRDITFD 400
F SEG D D
Sbjct: 671 DVFVFSEGEDQVLD 684
Score = 44.0 bits (102), Expect = 0.082, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-YYA 311
I G + + + ++++G G+D ++G + ++ G+D G +G D
Sbjct: 180 ITGDDTDNDLDGSAGNDTILGLDGDDWLVGYAGDDSLEGGEGSDSLYGGAGDDYLNPGDN 239
Query: 312 PSYLYKIYRFENAIIVYD 329
Y Y + N + +
Sbjct: 240 TYYDYVVPGTGNDTVDFT 257
>gi|50731121|ref|XP_417176.1| PREDICTED: similar to Interstitial collagenase precursor (Matrix
metalloproteinase-1) (MMP-1) [Gallus gallus]
Length = 466
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 71/218 (32%), Gaps = 52/218 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ TT D+ E + AL WS V LTF++T +DI
Sbjct: 109 WKKNNLTYRIVNYTTKMRQTDV-------DEAIQKALKVWSSVTPLTFQKTEDKIADIMI 161
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
++N P +++ D+ + W G+G L HE+
Sbjct: 162 SFAYRDHNDNSPFDGPNGLLAHAFQPGEGLGGDVHLDEEETWTKD-GRGYNLFIVVAHEL 220
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YP Y Y P++ ++ D
Sbjct: 221 GHSLGLSHSNDPGALMYPNYA----------------YTDPKEFLLPQ----------DD 254
Query: 188 IVAVQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTI 222
I +Q IYG G ++ I T+
Sbjct: 255 IDGIQAIYGQSDDAVQPTGPTTPQVCDPNLTFDAITTL 292
>gi|149204104|ref|ZP_01881072.1| 5'-nucleotidase [Roseovarius sp. TM1035]
gi|149142546|gb|EDM30591.1| 5'-nucleotidase [Roseovarius sp. TM1035]
Length = 415
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + + + ID + + IGG I +
Sbjct: 217 NDVLAGGAGNDTLSGGDGNDSMSGSF---GNDLIDAGSGAD-DIGGGTGRDAINAGAGND 272
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V G G+D + G + N+ +D+ DG +G DT A + + + +
Sbjct: 273 RVGGGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTINGGAGNDVMTGGADADQFVFSA 332
Query: 330 ANEHKQDFLSDVER 343
+ + D ++D E
Sbjct: 333 FFDGEADVITDFED 346
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 9/143 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTL----IGGVKNYIDLNTESWSS-IGGYEKNMTIAQ 264
++ S G+DL+D IGG +N + + +GG E + TI+
Sbjct: 226 NDTLSGGDGNDSMSGSFGNDLIDAGSGADDIGGGTGRDAINAGAGNDRVGGGEGDDTISG 285
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFE 322
+ + G +D++ G + N+ +GNDV G + D F + A I FE
Sbjct: 286 GNGNDFLAGGGRDDIIDGGTGNDTINGGAGNDVMTGGADADQFVFSAFFDGEADVITDFE 345
Query: 323 NAIIVYDANEHKQDFLSDVERLR 345
+ + + D VE +
Sbjct: 346 DGLDSFFIRRFDPDT--GVENIS 366
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 57/190 (30%), Gaps = 12/190 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ TI G+D + + + + L +IGG N TI
Sbjct: 143 GGDDTLAGDAGNDTIDGGAGNDRISAS----DGDDVVLGGSGNDNIGGGVGNDTIDGGDG 198
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-- 325
+ + G+D V G N+V +GND G G D+ + L + I
Sbjct: 199 DDVMGAGFGDDSVSGGLGNDVLAGGAGNDTLSGGDGNDSMSGSFGNDLIDAGSGADDIGG 258
Query: 326 ------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
I A + + + + + I++ + + G DV
Sbjct: 259 GTGRDAINAGAGNDRVGGGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTINGGAGNDV 318
Query: 380 FESMKHFYEF 389
+F
Sbjct: 319 MTGGADADQF 328
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 45/144 (31%), Gaps = 10/144 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +IA +++ G +GND + G + N+ S G+DV G SG D
Sbjct: 130 ILGTVGNDSIAAGGGDDTLAGDAGNDTIDGGAGNDRISASDGDDVVLGGSGNDNI----G 185
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ D +S L + +
Sbjct: 186 GGVGNDTIDGGDGDDVMGAGFGDDSVSG------GLGNDVLAGGAGNDTLSGGDGNDSMS 239
Query: 373 QVIGQDVFESMKHFYEFGLSEGRD 396
G D+ ++ + G GRD
Sbjct: 240 GSFGNDLIDAGSGADDIGGGTGRD 263
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + HT + + G G+DV++G S N+ F +G+D G +G+DT A
Sbjct: 7 TLFGSSGNDFLFAHTGSDFLDGGGGDDVLLGESGNDTFVGGNGSDTLIGGTGIDTAIINA 66
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I E +I+ + + D +ER F DQ + + ++ ++
Sbjct: 67 TFASAVITESEGIVIISN-QDGTTDEFQGIERFSFLDQVVLAEDLIPDPVVPDAIFNGTQ 125
Query: 372 IQVI 375
+
Sbjct: 126 APEV 129
>gi|73621169|sp|Q9EV34|LKTA8_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762022|gb|AAG40289.1|AF314505_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---ILDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSN 812
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 7/135 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDILDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D + + +
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDLTFEKVKHN 824
Query: 334 KQDFLSDVERLRFAD 348
S E++ D
Sbjct: 825 LVITNSKKEKVTIQD 839
>gi|85704987|ref|ZP_01036087.1| type I secretion target repeat protein [Roseovarius sp. 217]
gi|85670309|gb|EAQ25170.1| type I secretion target repeat protein [Roseovarius sp. 217]
Length = 750
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 5/150 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G D +D G N +N + + + N ++ T +S+ G SGND ++G
Sbjct: 191 ASGSDRVDNNDAPGGGNDDVINAGAGNDTVLAGLGNDSVQGGTGADSLSGESGNDTLLGE 250
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPS---YLYKIYRFENAIIVYDANEHKQDFLSD 340
+ +G+D DG +G DT + + + Y++Y + A + + L+
Sbjct: 251 GGTDTLIGGAGDDSLDGGTGNDTLYGDGGTAARWSYQVYTRDFTSANGQAFDIESGTLAG 310
Query: 341 -VERLRFADQCIDSVNVKQRSILEYTASYE 369
F Q +Y Y
Sbjct: 311 SGTSAAFDVTGHGQQATGQGDPNDYGVIYS 340
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 34/174 (19%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI---DLNTES- 249
IY + + + +Y+ D ++ I DS G D + T G D + +
Sbjct: 338 IYSSNLIATADGVYRFATTSDDGSTVR-ILDSNG-DPVTFTNQNGTTGSFLDNDFHQGAT 395
Query: 250 --------------------WSSIGG--YEKNMTIAQHTVIESVVGSS--GNDVVIGNSA 285
W ++GG +T+ V + G+D + GN
Sbjct: 396 TRWGEVTLEAGQSYTIEVRYWENLGGNVLSGTVTLPGGAVQDLATSPLIVGSDSIAGN-- 453
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ +G D+ G G DT LY ++ ++ E ++
Sbjct: 454 -DYLDGGAGADLLFGEGGTDTLIAGENDTLYG-GDGDDLFVIGSPAETGTGTIT 505
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 32/114 (28%), Gaps = 4/114 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + GG TE +S N + + +GND V+ N
Sbjct: 167 GIDDGIVQGTGGADLINSGYTEPVASGSDRVDNNDAPGGGNDDVINAGAGNDTVLAGLGN 226
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ +G D G SG DT + A D L
Sbjct: 227 DSVQGGTGADSLSGESGNDTLLGEGGTDTL----IGGAGDDSLDGGTGNDTLYG 276
>gi|119485232|ref|ZP_01619617.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
gi|119457460|gb|EAW38585.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
Length = 681
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 65/167 (38%), Gaps = 11/167 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G+D + GG +N L S+ G + + + + + G+ GND + G
Sbjct: 476 NDGNDTV----FGGKENDTLLGNAGEDSLFGDQDDDLLYGGENADWLNGNLGNDTIKGGD 531
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDFLS 339
+++ + GNDV +G +G D + I I D
Sbjct: 532 GDDLAYGGQGNDVLEGEAGNDLVSGDNGDDVLIGADPNITDAGQNEIDTLVGGVGADTFV 591
Query: 340 DVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++ + D ++S ++ ++++ + +D+IQ+ G +
Sbjct: 592 LGDEIQVYYDDGDLNSSGLEDYALIQDFDNTQDIIQLAGNAEDYRLD 638
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 56/178 (31%), Gaps = 17/178 (9%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G D D L + I G+ + I ++ G GND+
Sbjct: 413 FTVLTISGTDSSDNLLGSDNDSEI---------FRGFSGDDIIFGFAQPDNFFGGEGNDL 463
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL- 338
+ GN + + GND G DT A F + D+L
Sbjct: 464 MFGNQNEDFLEGNDGNDTVFGGKENDTLLGNAGEDSL----FGDQDDDLLYGGENADWLN 519
Query: 339 --SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK-HFYEFGLSE 393
+ ++ D + + +LE A + + G DV + + G +E
Sbjct: 520 GNLGNDTIKGGDGDDLAYGGQGNDVLEGEAGNDLVSGDNGDDVLIGADPNITDAGQNE 577
>gi|84499402|ref|ZP_00997690.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
gi|84392546|gb|EAQ04757.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
Length = 2266
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 35/113 (30%), Gaps = 7/113 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +I G D L V IDL + S + +E
Sbjct: 2092 DDTINAGGGADSIDGGAGTDTLRYANTSSV--TIDLGAGTGSGFAAEGDTI-----VNVE 2144
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+VVGS+ D + G+ A+N G D G G D + +
Sbjct: 2145 NVVGSNAADTLTGDGADNRLEGLYGEDTIKGGVGNDVLVGGGNADTFVFDTAG 2197
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE ++ S GND + GNSA N FF + G+D+ +G G D + L ++ F + V
Sbjct: 391 IEGMIASRGNDRITGNSAANAFFGNGGSDLLEGGGGDDRLGFGEGQALSDVFSFPGSSGV 450
Query: 328 YDANEHKQDFLSDVER 343
D+E+
Sbjct: 451 QAPGSDS-RLFYDIEQ 465
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 12/156 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + V+ + NT + GG + T IE++VGS D ++G++
Sbjct: 1935 GTDAVRYVSSAAVQVNLAANTGA----GGQAQGDTFYG---IENLVGSQFGDTLVGSAEA 1987
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDANEHKQ---DFLSDV 341
NV G+D+ G G DT +A + Y+ I ++ A D L V
Sbjct: 1988 NVIQGLDGDDLMRGWHGADTLIGHAGIDTASYQDSAVGVNIGIFRAGSGGTAEGDRLIFV 2047
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
E + + + V ILE + LI G
Sbjct: 2048 EGIIGSGHDDELVGGGFAPILEGAGGNDTLIDFGGN 2083
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 40/113 (35%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++VG GND + G + +V +G D G +G+DT Y + +
Sbjct: 88 TLVGRDGNDSLYGGAGRDVLIGGAGADALTGGAGVDTADYSGAATSVFVDLDFGGTGRGF 147
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
E + D L VE L +D + + L + L G D
Sbjct: 148 RGEAQGDVLDGVENLVGSDYEDILIGDNAANALAGGEGDDRLQSQGGTDTLSG 200
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 61/196 (31%), Gaps = 39/196 (19%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT-------------------- 247
+I ++ GG D LD+ GV Y DL+T
Sbjct: 491 QISAGGAVQDIGSFLWGQGGIDTLDMRYDRGVSFYPDLSTNYAVVDLNIASSAAPTNLYT 550
Query: 248 --------ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
W G ++ E+++GS +DV+IG+ +N G D
Sbjct: 551 GEQIQYGRAGWYDPAGTRQSFATTYGV--ENIIGSRRDDVLIGDRNDNRIEGLDGADEMR 608
Query: 300 GSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQ--------DFLSDVERLRFADQC 350
G +G DT Y + R E + V D D + ER ++
Sbjct: 609 GGAGFDTAAYSLADEGVTLNLRSEGSGFVLDNAREIVTGTGDATGDLAEEFERFEGSNHG 668
Query: 351 IDSVNVKQRSILEYTA 366
+ Q + + T
Sbjct: 669 DLFILEGQAAEIATTF 684
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 46/138 (33%), Gaps = 12/138 (8%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ GND +I N G+D + G D+ A + + + I A
Sbjct: 2070 GAGGNDTLIDFGGNATIRGGFGDDTINAGGGADSIDGGAGTDTLRYANTSSVTIDLGAGT 2129
Query: 333 HK-----QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH-- 385
D + +VE + ++ + LE + + +G DV +
Sbjct: 2130 GSGFAAEGDTIVNVENVVGSNAADTLTGDGADNRLEGLYGEDTIKGGVGNDVLVGGGNAD 2189
Query: 386 ---FYEFGLSEGRDITFD 400
F G GRD+ D
Sbjct: 2190 TFVFDTAGW--GRDLVLD 2205
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 51/183 (27%), Gaps = 28/183 (15%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ GDD + I L GG + IE+ +GS D
Sbjct: 1829 ADVLDGGSGDDFVTYAGAASGARRISL--GGTPGEGGESHGDVLRN---IENAIGSRFAD 1883
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDT------------------FFYYAPSYLYKIYR 320
V IG S N GND+F G G DT + +
Sbjct: 1884 VFIGTSGANALSGIGGNDLFYGLGGDDTLNGGSGDDALDGGDGADVLIGSVGTDAVRYVS 1943
Query: 321 FENAIIVYDANEHK-----QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ AN D +E L + V + ++++ + +
Sbjct: 1944 SAAVQVNLAANTGAGGQAQGDTFYGIENLVGSQFGDTLVGSAEANVIQGLDGDDLMRGWH 2003
Query: 376 GQD 378
G D
Sbjct: 2004 GAD 2006
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 5/114 (4%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+++Y + + G D D + ++DL+ E
Sbjct: 96 DSLYGGAGRDVLIGGAGADALTGGAGVDTADYSG-AATSVFVDLDFGGTGRGFRGEAQGD 154
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ E++VGS D++IG++A N G+D G DT L
Sbjct: 155 VLDGV--ENLVGSDYEDILIGDNAANALAGGEGDDRLQSQGGTDTLSGGEGDDL 206
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 43/156 (27%), Gaps = 29/156 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--------------- 297
+GG N + H + G G+D + G + ++ G+D
Sbjct: 1760 LGGLGTNDLLYGHDGANGLFGFGGDDNLFGFAGDDTLEGGKGDDTILGDLGLDHLLGGAG 1819
Query: 298 ------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
DG SG D Y + + R + E D L ++E
Sbjct: 1820 GDWLNGGSHADVLDGGSGDDFVTYAGAASGAR--RISLGGTPGEGGESHGDVLRNIENAI 1877
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + L + + G D
Sbjct: 1878 GSRFADVFIGTSGANALSGIGGNDLFYGLGGDDTLN 1913
>gi|75056095|sp|Q9GKE1|MMP27_TUPGB RecName: Full=Matrix metalloproteinase-27; Short=MMP-27; Flags:
Precursor
gi|12006364|gb|AAG44844.1|AF281673_1 matrix metalloproteinase-27 [Tupaia belangeri]
Length = 512
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 62/189 (32%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + AL WSKV LTF + +DI
Sbjct: 106 WRKYNLTYRIMNYTPDMARADV-------DEAIQKALEVWSKVTPLTFTKIFKGIADIMI 158
Query: 82 ISSNNGYVCTPRYDSRYFM--------------EINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKDTA-GFSLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D S + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPSKYPLSQ---DD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 IDGIQSIYG 261
>gi|296221444|ref|XP_002756745.1| PREDICTED: matrix metalloproteinase-21 [Callithrix jacchus]
Length = 571
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 44/220 (20%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDIT-ELNPN-AQEVARWALGEWS 63
P + R R + L+ L ++ +L+ + + A WS
Sbjct: 150 PSLSLSRRGWQ-PRGFTDGGAAQAFSKRTLSWRLLGEALSSQLSAAEQRRIVALAFRMWS 208
Query: 64 KVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY---------FMEINFDKADVW 110
+V L F E + + DIK ++ PR +I+FD + +
Sbjct: 209 EVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSGQEFAHAWRLGDIHFDDDEHF 268
Query: 111 RY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ 169
G L A+HEIGH LGL P +Y G S+M P
Sbjct: 269 TPPTSDMGISLLKVAVHEIGHVLGL--PHTYRTG-----------------SIM---QPN 306
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + F +D A+QK+YG+ +G+ + +
Sbjct: 307 YTPQEPVFE----LDWADRKAIQKLYGSCEGTF-DTAFDW 341
>gi|157278511|ref|NP_001098357.1| membrane-type matrix metalloproteinase [Oryzias latipes]
gi|67077823|dbj|BAD99513.1| membrane-type matrix metalloproteinase [Oryzias latipes]
Length = 610
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 48/157 (30%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------T 73
W + + T + E R A W KV L F E
Sbjct: 117 WHKKDVTFSIQNYTPKVGEY-------ETHEAIRRAFKIWEKVTPLRFREIPYSYIRDKV 169
Query: 74 SIHSDIKFIS------------SNNGYVCTPRYDSRYFM-EINFDKADVWRYGIG--KGT 118
+DI G++ + + +FD A+ W G G
Sbjct: 170 EKFADIMIFFAEGFHGDSSPFDGEGGFLAHAYFPGDGIGGDTHFDAAEPWTIGNKDLSGN 229
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 230 DVFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 266
>gi|77465510|ref|YP_355013.1| hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
2.4.1]
gi|126463913|ref|YP_001045026.1| hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
gi|221369513|ref|YP_002520609.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
KD131]
gi|332561168|ref|ZP_08415486.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
WS8N]
gi|77389928|gb|ABA81112.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
2.4.1]
gi|126105724|gb|ABN78254.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
gi|221162565|gb|ACM03536.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
KD131]
gi|332274966|gb|EGJ20282.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
WS8N]
Length = 202
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 12/139 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSSI-GGYEK 258
+ IY + IY G+D L G DL S I G
Sbjct: 20 DIIYGGSGNDR-------IYGGAGNDELKGGFGNDRLWGGTGRDDLEGGSGDDILSGGAG 72
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + G +GND + G S + SGND DG +G D A +++
Sbjct: 73 DDELEGDAGNDRLWGGAGNDELEGGSGADRLHGGSGNDRLDGGTGNDVLTGGAGRDVFEF 132
Query: 319 YRFENAIIVYDANEHKQDF 337
R + + D +
Sbjct: 133 ERGDGRDRITDFTNGQDRL 151
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G +N I T++W I G N I + + G GND + G + + SG+D
Sbjct: 6 GTARNDILQGTDAWDIIYGGSGNDRIYGGAGNDELKGGFGNDRLWGGTGRDDLEGGSGDD 65
Query: 297 VFDGSSGLDTFFYYAPSY 314
+ G +G D A +
Sbjct: 66 ILSGGAGDDELEGDAGND 83
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 12/146 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G +N + + + G SGND + G + N+ GND G +G D +
Sbjct: 4 IKGTARNDILQGTDAWDIIYGGSGNDRIYGGAGNDELKGGFGNDRLWGGTGRDDLEGGSG 63
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ + N+ + E L + + L
Sbjct: 64 DDILSGGAGDDELEGDAGNDRLWGGAGNDE----------LEGGSGADRLHGGSGNDRLD 113
Query: 373 QVIGQDVFESMK--HFYEFGLSEGRD 396
G DV +EF +GRD
Sbjct: 114 GGTGNDVLTGGAGRDVFEFERGDGRD 139
>gi|300867801|ref|ZP_07112444.1| hypothetical protein OSCI_3480023 [Oscillatoria sp. PCC 6506]
gi|300334218|emb|CBN57616.1| hypothetical protein OSCI_3480023 [Oscillatoria sp. PCC 6506]
Length = 263
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 67/200 (33%), Gaps = 35/200 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
G+ I+ + T+Y GGDD L D +++G N I S+
Sbjct: 49 TGSGDQIFGLAS-------FDTLYGLGGDDTLSGDTGDDSVLGEGGNDILFGGSDRDSLF 101
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV------------------FFESSGND 296
G + + TI +S G GN+ + GN+ N+ +G+D
Sbjct: 102 GDDGDDTIFGGKGNDSASGGVGNNQLFGNTGNDTLIGGLDDDSLFGGTDDDSLIGGAGDD 161
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSDVERLRFADQCI 351
+ G G DT S + I R + DA+ D + L F D I
Sbjct: 162 LLSGDRGRDTLTGGEGSDTFVIGRLTGGLTEADADVITDFTDGADRIRLSAGLTFGDLTI 221
Query: 352 DSVNVKQRSILEYTASYEDL 371
S + + D+
Sbjct: 222 VQGGGTAPSTVIQLINGNDV 241
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 10/136 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS--------- 302
S+ G I +++ G G+D + G++ ++ GND+ G S
Sbjct: 45 SLRGTGSGDQIFGLASFDTLYGLGGDDTLSGDTGDDSVLGEGGNDILFGGSDRDSLFGDD 104
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT F + N + N+ L D D + +L
Sbjct: 105 GDDTIFGGKGNDSASGGVGNNQLFGNTGNDTLIGGLDDDSLFGGTDDD-SLIGGAGDDLL 163
Query: 363 EYTASYEDLIQVIGQD 378
+ L G D
Sbjct: 164 SGDRGRDTLTGGEGSD 179
Score = 41.3 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 10/123 (8%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
I + +S+ G+ D + G ++ + + G+D G +G D+ + +
Sbjct: 33 GGNIIRGTSEPDSLRGTGSGDQIFGLASFDTLYGLGGDDTLSGDTGDDSVLGEGGNDIL- 91
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
F + + D + + + L + LI +
Sbjct: 92 ---FGGSDRDSLFGDDGDDTIFG------GKGNDSASGGVGNNQLFGNTGNDTLIGGLDD 142
Query: 378 DVF 380
D
Sbjct: 143 DSL 145
>gi|317050412|ref|YP_004111528.1| Hemolysin-type calcium-binding region [Desulfurispirillum indicum
S5]
gi|316945496|gb|ADU64972.1| Hemolysin-type calcium-binding region [Desulfurispirillum indicum
S5]
Length = 1296
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G++GND +IG S N++F S+G+D+ DG G++T Y LY++
Sbjct: 780 DAITGTAGNDNLIGTSNNDIFIGSAGDDIIDGVGGVNTVVYVGNHTLYQVIDNGGGSYTV 839
Query: 329 DANEHKQDFLSDVERLRFAD 348
D L++++ L F D
Sbjct: 840 -VKPDGTDTLTNIQYLSFGD 858
>gi|254360695|ref|ZP_04976844.1| leukotoxin [Mannheimia haemolytica PHL213]
gi|126356|sp|P16535|LKA1A_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|73621154|sp|Q7BHI8|LKA1B_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762018|gb|AAG40287.1|AF314503_1 leukotoxin [Mannheimia haemolytica]
gi|150494|gb|AAA25529.1| LktA protein [Mannheimia haemolytica]
gi|153091235|gb|EDN73240.1| leukotoxin [Mannheimia haemolytica PHL213]
Length = 953
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---ILDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSN 812
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 6/108 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDILDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE 322
+D + G N++ G+D+F G D +
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSN 812
>gi|83749294|ref|ZP_00946292.1| RTX family calcium-binding cytotoxins and bacteriocins [Ralstonia
solanacearum UW551]
gi|83724025|gb|EAP71205.1| RTX family calcium-binding cytotoxins and bacteriocins [Ralstonia
solanacearum UW551]
Length = 1643
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 54/151 (35%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
IG N S ++ N + +++ G +G+DV+ G N+ +
Sbjct: 660 ATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGDAGDDVIYGGDGNDFLQGND 719
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G D DG +G DT + A + + + N+ D + ++D +
Sbjct: 720 GADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSA 779
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + A E ++ G D+ S+
Sbjct: 780 GKLNVIQFKDGVAPSEVVVTRSGSDLVLSIA 810
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 3/147 (2%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ +V + D+ D T G N + ++ G + I
Sbjct: 649 SVTGFDVFAAAATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGDAGDDVIYG 708
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G+ G D + G + ++ + +GND DG +G DT + Y + +
Sbjct: 709 GDGNDFLQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQ 768
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCI 351
+Y + L ++F D
Sbjct: 769 DFIYSDYDTSAGKL---NVIQFKDGVA 792
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SGG D D TL G + I ++ G + + +++ G GND++ G +
Sbjct: 1040 SGGTDGAD-TLTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGA 1098
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ + +GNDV DG +G DT + Y + + +Y + + L +
Sbjct: 1099 DNDNLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKL---NVI 1155
Query: 345 RFADQC 350
+F D
Sbjct: 1156 QFKDGV 1161
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND + G + N+ + +GND DG +G DT
Sbjct: 881 NVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEG 940
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ Y + + +Y + + L ++F D
Sbjct: 941 GNDTYLFGKGDGQDFIYSDYDTSANKL---NVIQFKDGV 976
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND + G + N+ + +GND DG +G DT
Sbjct: 1251 NVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEG 1310
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ Y + + +Y + + L ++F D
Sbjct: 1311 GNDTYLFGKGDGQDFIYSDYDTSANKL---NVIQFKDGV 1346
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND++ G + N+ + +GNDV DG +G DT
Sbjct: 1436 NVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLSGEG 1495
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ Y + + +Y + + L ++F D
Sbjct: 1496 GNDTYLFGKGDGQDFIYSDYDTSANKL---NVIQFKDGV 1531
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S ++ GY + TI ++V G G+DV+ G + N+ + GND G + D +
Sbjct: 860 SSQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLY 919
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + N+ D + ++D + + + +
Sbjct: 920 GGNGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPS 979
Query: 369 EDLIQVIGQDVFESMK 384
E ++ G D+ S+
Sbjct: 980 EVVVTRSGSDLVLSIA 995
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S ++ GY + TI ++V G G+DV+ G + N+ + GND G + D +
Sbjct: 1230 SSQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLY 1289
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + N+ D + ++D + + + +
Sbjct: 1290 GGNGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPS 1349
Query: 369 EDLIQVIGQDVFESMK 384
E ++ G D+ S+
Sbjct: 1350 EVVVTRSGSDLVLSIA 1365
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 53/136 (38%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S ++ GY + TI ++V G G+DV+ G + N+ + GND+ G + D +
Sbjct: 1415 SAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLY 1474
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + + N+ D + ++D + + + +
Sbjct: 1475 GGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPS 1534
Query: 369 EDLIQVIGQDVFESMK 384
E ++ G D+ S+
Sbjct: 1535 EVVVTRSGSDLVLSIA 1550
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 50/133 (37%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + I ++V G G+DV+ G + N+ + GND+ G + D +
Sbjct: 1048 TLTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGN 1107
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + N+ D + ++D + + + + E +
Sbjct: 1108 GNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVV 1167
Query: 372 IQVIGQDVFESMK 384
+ G D+ S+
Sbjct: 1168 VTRSGSDLVLSIA 1180
>gi|23015941|ref|ZP_00055704.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 12295
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 75/234 (32%), Gaps = 37/234 (15%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-------------------- 238
G GN+ +++ D TI G D L L G
Sbjct: 4078 TGGSGNDTFRLS----DFTSADTINGGAGSDTLVLNFTSGGVVVDSAFAHVSGVETLMVA 4133
Query: 239 -VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND-VVIGNSANNVFFESSGND 296
+ + + + +S G+ + G G+ + G ++ F +GND
Sbjct: 4134 ASGSPLSITMGTIASGAGFNTLDAHLSGADVSLDAGGHGSAMTMTGGIGSDTFTGGAGND 4193
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN----EHKQDFLSDVERLRFADQCID 352
VFDG G D ++ Y+I + V D N D L VE L+F+D +
Sbjct: 4194 VFDGGYGTDKAAFHGSEAGYRISMANGTVTVTDTNTADGNDGTDTLVGVETLQFSDGSLT 4253
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSE-----GRDITF 399
+ + + D + + + G E G+D +F
Sbjct: 4254 VTQAAPTLGSLTVSGTKTQVNTFTTDNQQQPFISKLADGGWVEVWRSYGQDASF 4307
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI--GNSANNVFFESSGNDVFDGSSGL 304
+ S S+ G N TI I+SV+G G+D + GN+ +G+D+ G SG
Sbjct: 4024 SGSPFSVMGGSGNDTINVGNGIDSVIGGLGDDTISAAGNTVGITLDGGAGSDILTGGSGN 4083
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
DTF + I + +
Sbjct: 4084 DTFRLSDFTSADTINGGAGSDTLVLNFTSG 4113
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
Y G ++ + + ID WS+ N+T+ + + +VG G D + G
Sbjct: 1953 YTPSGGSAVNTSFTWQANDGID-----WSTSATATINLTVQK----QILVGGPGADTLSG 2003
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
SA++ G D+ DG +G + F Y A +
Sbjct: 2004 GSADDTLTGGGGADILDGGAGSNVFVYQAKTDST 2037
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 75/247 (30%), Gaps = 22/247 (8%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMS----YFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
N + VD ND+ S S + T ++SD I
Sbjct: 5081 NVAGGIDSVDGGAGNDTLSASGSSTAVTLNGGTGNDTLTGGSGNDTFLLSDFSNADSI-- 5138
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN+ ++ + + L L G + S +
Sbjct: 5139 --NGGAGNDTLRLNFTTGGVVVDSAFANVHNVETLMLAASGSPLSVTFGTASSGAGFTVV 5196
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ +++ A T+ S +G S +IG ++ +G DV G+ G D F + A +
Sbjct: 5197 DAHLSTAAVTL--SALGDSTIQTLIGGQGSDTLSAGAGGDVLTGNLGSDVFKFEAGT--- 5251
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + DF + V+++ + V+ + L+ +G
Sbjct: 5252 --------VSTSASPAVITDFTTGVDKVDLS-AGGSLTYVQVMPWQGTPTATAALLSGLG 5302
Query: 377 QDVFESM 383
Sbjct: 5303 GGNMVGF 5309
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 18/114 (15%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI-----------GNSANNVFFESSGN 295
+ + S IGG ++ I+SV G +GND + G + N+ SGN
Sbjct: 5066 SATLSLIGGSGADVINVAG-GIDSVDGGAGNDTLSASGSSTAVTLNGGTGNDTLTGGSGN 5124
Query: 296 DV--FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
D S D+ A + ++ ++V A + + +VE L A
Sbjct: 5125 DTFLLSDFSNADSINGGAGNDTLRLNFTTGGVVVDSAFAN----VHNVETLMLA 5174
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 13/129 (10%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ SG D + + + + S G T + + S++G SG DV+
Sbjct: 5022 VVASGLVSEYDFAGATPLADKSGNSHTATMSDAGSPTITTTSSGSATLSLIGGSGADVIN 5081
Query: 282 GNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ +GND +G +G DT + + + + F NA +
Sbjct: 5082 VAGGIDSVDGGAGNDTLSASGSSTAVTLNGGTGNDTLTGGSGNDTFLLSDFSNADSI--N 5139
Query: 331 NEHKQDFLS 339
D L
Sbjct: 5140 GGAGNDTLR 5148
Score = 44.3 bits (103), Expect = 0.064, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 32/96 (33%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ S + M+ A I + S +IG S +V + G D DG +G D
Sbjct: 5037 TPLADKSGNSHTATMSDAGSPTITTTSSGSATLSLIGGSGADVINVAGGIDSVDGGAGND 5096
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
T S + + + + LSD
Sbjct: 5097 TLSASGSSTAVTLNGGTGNDTLTGGSGNDTFLLSDF 5132
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 14/173 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----------DLTLIGGVKNYIDLNTESWS 251
GN++++ DS +I SGG + + D T + V L
Sbjct: 3859 GNHVFQFGPGLLDS--FDSILASGGLNTISLMAATGGLYVDDTALTNVYGVQTLKITGGG 3916
Query: 252 SIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N A +V++ S + + +S SG G SG D
Sbjct: 3917 YFGNLGANAMKAGVSVVDASAITGTIAFDATQDSNGVTLIAGSGATDMYGGSGHDVAVVQ 3976
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + I + V + VE +RF+D S+ S
Sbjct: 3977 STAAAGTISGGGSGFFVTGPTSGSGLSMHGVEEVRFSDAKTLSLIASSGSPFS 4029
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 18/48 (37%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++G + S +D G G D A S ++ ++ +
Sbjct: 1991 ILVGGPGADTLSGGSADDTLTGGGGADILDGGAGSNVFVYQAKTDSTV 2038
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 32/208 (15%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ + +T + + ++++ S+ G+S +++V+GN
Sbjct: 3423 SGTTVADATGNGHTATLGAYASLSTSVSLPT-----SLTGTSADEIVLGNLGEATLNGGG 3477
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK----------QDFLSDVER 343
G+DVF T + S + + + + D ++++
Sbjct: 3478 GHDVFYVGGADQTIIGDSSSGGKVSFAYNSGPVTASLASGMATITNGASTYHDTITNISE 3537
Query: 344 LRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L ++ I +S+LE A + L+ G V + G G + +
Sbjct: 3538 LEGSNAADILYGAASGQSVLEGGAGNDTLMGGGGFTVAS----YKHAGA--GVSVNLSTG 3591
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHG 430
+Y FG+ G+A Y +G
Sbjct: 3592 IY----------FGASSGSALESYYVNG 3609
>gi|326677672|ref|XP_698601.5| PREDICTED: matrix metalloproteinase-17 [Danio rerio]
Length = 588
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 21/149 (14%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + R L W+ + ++ S + + + +AL WS +
Sbjct: 103 PDLSAGRRKRALAPQNKWNKRHLSWRVRTFPKESTSLGRDTV----RALMYYALKVWSDI 158
Query: 66 VDLTFEETSIH-SDIKFISS----NNGYVCTPRYDSRYF----------MEINFDKADVW 110
L F E + + +DI+ + N+GY + + +FD + W
Sbjct: 159 APLNFHEVAGNEADIQIDFTKADHNDGYPFDGPGGTVAHAFFPGERFTAGDTHFDDDEAW 218
Query: 111 RY--GIGKGTILSHNALHEIGHALGLMHP 137
+ G L A+HE GHA+GL H
Sbjct: 219 TFRAPDSHGMDLFAVAVHEFGHAIGLAHT 247
>gi|291409995|ref|XP_002721290.1| PREDICTED: matrix metalloproteinase 21 [Oryctolagus cuniculus]
Length = 574
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 41/168 (24%)
Query: 45 TELN-PNAQEVARWALGEWSKVVDLTFEET----SIHSDIKFISSNNGYVCTPRYDSRY- 98
++L+ + + R A WS+V L F E + DIK ++ PR
Sbjct: 192 SQLSVDEQKSIFRLAFRMWSEVTPLDFREDRTAPAATVDIKLGFGRGRHLGCPRVFDGSG 251
Query: 99 --------FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + + +G L A+HEIGH LGL P +Y G
Sbjct: 252 QEFAHAWRLGDIHFDDDEHFTPPTSDRGISLLKVAVHEIGHVLGL--PHTYRPG------ 303
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + + +F SD A+QK+YG+
Sbjct: 304 -----------SIM---QPNYTPQEPAFE----LDWSDRKAIQKLYGS 333
>gi|209964156|ref|YP_002297071.1| S-layer protein [Rhodospirillum centenum SW]
gi|209957622|gb|ACI98258.1| S-layer protein [Rhodospirillum centenum SW]
Length = 1090
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDAFKALEYIASHEDLIN 538
F+ FDS YL + D+ + +AR H+ GVKE RNP+A L YI +
Sbjct: 4 FLAFDSTAYLKNNPDVLQAVLNGGFPSARAHFEQFGVKELRNPNAVVNLTYILTENADTV 63
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSI-----TFNPDLYLTSYDDLWNVFGSDR-SAAAQ 592
A + D + N G + G + TF+ YL D+ + +A +
Sbjct: 64 LAAIQSGAAKDVFDWYVNTGVKTGVAPNAELATFDSAKYLADNLDVKAAVDAGVFKSALE 123
Query: 593 HYITHGMKEGR-ALGISGMQFK 613
HY+ +G E R A G Q
Sbjct: 124 HYLAYGRAESRPAFSTDGTQVD 145
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 7/139 (5%)
Query: 397 ITFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
+ FDS YL + D+ +A H+ GVKE RNP+A L YI +
Sbjct: 5 LAFDSTAYLKNNPDVLQAVLNGGFPSARAHFEQFGVKELRNPNAVVNLTYILTENADTVL 64
Query: 456 FADAPDLVQVGKDHFSNFGCEEG-----RFVTFDSYLYLGSYDDLRNVFGSDRG-AAARH 509
A + D + N G + G TFDS YL D++ + +A H
Sbjct: 65 AAIQSGAAKDVFDWYVNTGVKTGVAPNAELATFDSAKYLADNLDVKAAVDAGVFKSALEH 124
Query: 510 YITHGVKEGRNPDAFKALE 528
Y+ +G E R + +
Sbjct: 125 YLAYGRAESRPAFSTDGTQ 143
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 11/134 (8%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGRDIT--FDSYLYLGSYDD- 410
N Y + D++Q + F S HF +FG+ E R+ + L D
Sbjct: 3 NFLAFDSTAYLKNNPDVLQAVLNGGFPSARAHFEQFGVKELRNPNAVVNLTYILTENADT 62
Query: 411 -LRNVFGSDRGAAARHYITHGVKEGRNPDA----FKALEYIASHEDLINAFADAPDLVQV 465
L + Y+ GVK G P+A F + +Y+A + D+ A + +
Sbjct: 63 VLAAIQSGAAKDVFDWYVNTGVKTGVAPNAELATFDSAKYLADNLDVKAAV--DAGVFKS 120
Query: 466 GKDHFSNFGCEEGR 479
+H+ +G E R
Sbjct: 121 ALEHYLAYGRAESR 134
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G +++A +T ++ +GND + G+ N+V GND + S+G DT
Sbjct: 895 TGNGNDVISVATNTKGATIDTGTGNDGITGSEGNDVINAGGGNDTVNSSAGADTITLGDG 954
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y + ++++ K D + D A+ + + D+I
Sbjct: 955 KDTYDLRDAAHSVL------AKYDTILDFN----ANTVLADDDNASEGGAALADRDGDVI 1004
Query: 373 QVIGQ 377
V G+
Sbjct: 1005 DVSGR 1009
>gi|73621160|sp|P0C084|LKA7A_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|73621168|sp|P0C083|LKTA6_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762020|gb|AAG40288.1|AF314504_1 leukotoxin [Mannheimia haemolytica]
gi|11762024|gb|AAG40290.1|AF314506_1 leukotoxin [Mannheimia haemolytica]
gi|11762026|gb|AAG40291.1|AF314507_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---ILDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSN 812
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 7/135 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDILDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D + + +
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDLTFEKVKHN 824
Query: 334 KQDFLSDVERLRFAD 348
S E++ D
Sbjct: 825 LVITNSKKEKVTIQD 839
>gi|109109582|ref|XP_001086245.1| PREDICTED: stromelysin-2 [Macaca mulatta]
Length = 476
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 57/194 (29%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T+ A+ W +V LTF
Sbjct: 108 WRKTHLTYRIVNYTSDLPG-------DAVDSAIEKAVKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F S + + +I+FD + W GT L A HE+
Sbjct: 161 SFAVKEHGDFYSFDGSGHSLAHAYPPGPGLYGDIHFDDDEHWTED-ASGTNLFFVAAHEL 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + N + + D+
Sbjct: 220 GHSLGLFHSANTEA--LMYPLYNSFTELTRFH----------------------LSQDDV 255
Query: 189 VAVQKIYGAPKGSL 202
+Q +YG P S
Sbjct: 256 NGIQSLYGPPPAST 269
>gi|91790750|ref|YP_551701.1| hemolysin-type calcium-binding region [Polaromonas sp. JS666]
gi|91700630|gb|ABE46803.1| Hemolysin-type calcium-binding region [Polaromonas sp. JS666]
Length = 2097
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 4/178 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G+D L Y D + SI G + +
Sbjct: 1505 GGNDTLDGGNGNDTLIGGFGNDSLVGGAGIDTATYADASGAVVVSISGTGSASGGSGNDT 1564
Query: 268 ---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+++GS+ ND + GN++ N +GND +G +G DT A Y I +
Sbjct: 1565 LSGIENLIGSAYNDTLTGNTSANRIEGGAGNDSLNGGTGADTLLGGAGDDQYTIDNLGD- 1623
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+++ DA+ +S V+ + +Q + ++ G ++ +
Sbjct: 1624 VVIEDASAGTDTIVSSVDYVLGVNQENLRLTAAVGGNGTGNNLANLILASAGDNILDG 1681
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 64/197 (32%), Gaps = 17/197 (8%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
LG+N + Q + +I GG DL+ L T +
Sbjct: 896 NDTLLGSNTTALTEQFEGGLGDDSIDGRGGFDLVRFNSSSVAGVTASLATGT----ATGA 951
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANN----------VFFESSGNDVFDGSSGLDTF 307
N T +E ++GS ND + G A N VF +GND DG G D
Sbjct: 952 GNDTF---VNVEGLIGSDFNDSLTGGLAANGVTVSDGLLEVFRGGAGNDTIDGGQGYDRV 1008
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + + + + A D L ++E +R +D + LE
Sbjct: 1009 HYDSSTSGVTVTLNDTADGSASDGLGGTDVLRNIEGVRGSDFSDSITGDAGNNRLEGLGG 1068
Query: 368 YEDLIQVIGQDVFESMK 384
+ L G D +
Sbjct: 1069 NDTLNGGDGNDTLDGGA 1085
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 7/162 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--I 268
+ I S GD++LD + +Y +S+ +V
Sbjct: 1659 GNGTGNNLANLILASAGDNILDGSTGNDTVSYAYSGAGVTASLTSRTATGGSGNDSVTNF 1718
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+++GS+ D +IGN+ N + G D +G +G DT + S + + + +I
Sbjct: 1719 ENIIGSNYADSLIGNTLANRLEGAGGADSLNGGTGADTLIGGSGSDQFYVENVGDIVI-- 1776
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
E D LS + + A + NV+ I
Sbjct: 1777 ---ETGSDALSGTDIVFAAISYALTANVENLRINTTGNVNAT 1815
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 67/194 (34%), Gaps = 12/194 (6%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTE-SWSSIG 254
A + + + + ++ + ++ G GDD +D + +++ + + S
Sbjct: 358 ANFNQVRGSSFNDTLLGSNTTALTEQFEGGLGDDYIDGLGGFDIVRFVNSASGVTASLAD 417
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN----------VFFESSGNDVFDGSSGL 304
G +E + GS ND + G A N VF +GND DG G
Sbjct: 418 GAATGAGTDTFVNVEGLFGSDFNDSLTGGLAANGVTVSDGLLEVFRGGAGNDTIDGGQGY 477
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D Y + + + A D L +E +R +D + + LE
Sbjct: 478 DRVHYDTSTSGVTVTLNDTADGSASDGLGGTDVLRSIEGVRGSDFNDIIIGNSGNNKLEG 537
Query: 365 TASYEDLIQVIGQD 378
+ L+ G D
Sbjct: 538 LGGNDSLLGGAGAD 551
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 2/149 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++L + + +I G N ++ ++ G G+D + G++ ++
Sbjct: 60 TVNLATGAAIGGSGNDTLTGLENIFGSAFNDSLTGDANSNALRGEVGDDTLDGDAGDDYL 119
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+GND G G DT Y+ + + I +V D L+ +E + +
Sbjct: 120 TGGAGNDSLTGGIGNDTADYFYSNAVAGINASLATGVVTGG--DGSDTLTGIENINGTNF 177
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ V ++L+ + L G D
Sbjct: 178 SDNIVGDSNANVLQGQGGDDTLNGGGGND 206
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 35/189 (18%)
Query: 225 SGGDDLLDLTL--------IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
G+D +D + LN + S + + IE V GS
Sbjct: 465 GAGNDTIDGGQGYDRVHYDTSTSGVTVTLNDTADGSASDGLGGTDVLRS--IEGVRGSDF 522
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL--------------------- 315
ND++IGNS NN GND G +G DT A +
Sbjct: 523 NDIIIGNSGNNKLEGLGGNDSLLGGAGADTLLGGAGNDWLVGGGGNDFIDGGTGSDLAYF 582
Query: 316 ----YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + +V + E + + + +VE L + + A + L
Sbjct: 583 EDAASGVVIDLSTGVVSNNGEGQVETIINVENLHGSHFNDVIQLSSVGGYVFGRAGNDSL 642
Query: 372 IQVIGQDVF 380
+G D F
Sbjct: 643 TGGVGNDNF 651
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 11/145 (7%)
Query: 225 SGGDDLLDLTL--------IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
G+D +D + LN + S + ++ IE V GS
Sbjct: 993 GAGNDTIDGGQGYDRVHYDSSTSGVTVTLNDTADGSASDGLGGTDVLRN--IEGVRGSDF 1050
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + G++ NN GND +G G DT A + ++ A D
Sbjct: 1051 SDSITGDAGNNRLEGLGGNDTLNGGDGNDTLDGGAGDDTL-LGGAGADTLIGGAGNDLID 1109
Query: 337 FLSDVERLRFADQCIDSVNVKQRSI 361
++R+ D +
Sbjct: 1110 GGLVLDRINGTDYNFVDYVSATAGV 1134
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 5/190 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G D + +G I+ +++ S ++ A
Sbjct: 1743 GGADSLNGGTGADTLIGGSGSDQFYVENVG--DIVIETGSDALSGTDIVFAAISYALTAN 1800
Query: 268 IESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E++ + ++GN GN +NV F +GN+ DG G+DT Y S + +
Sbjct: 1801 VENLRINTTGNVNATGNELDNVLFAGAGNNTLDGGDGIDTANYGFTSGGVNVSLAIASAQ 1860
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D L ++E L ++ +++E + L +
Sbjct: 1861 AT--GNSGSDTLLNIENLTGSNYNDTLQGNSADNVIEGGVGIDTLTYAAASAAVNASLST 1918
Query: 387 YEFGLSEGRD 396
EG D
Sbjct: 1919 KTASGGEGND 1928
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 203 GNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ + ++ G+D D I+ + + GG +
Sbjct: 106 GDDTLDGDAGDDYLTGGAGNDSLTGGIGNDTADY-FYSNAVAGINASLATGVVTGGDGSD 164
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T IE++ G++ +D ++G+S NV G+D +G G DT A + +
Sbjct: 165 TL----TGIENINGTNFSDNIVGDSNANVLQGQGGDDTLNGGGGNDTLLGGAGADVITGG 220
Query: 320 RFENAI 325
++++
Sbjct: 221 AGDDSL 226
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 11/185 (5%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A ++G+ + + TI G D +D T + LN + S
Sbjct: 1341 ANGVTIGD---GLSEVFRGEAGNDTIDGGQGYDRVDYTS-STAGVTVTLNDTADGSANDG 1396
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ ++ IE V GS+ ND + G+ F G+D +G G+D Y
Sbjct: 1397 LGGTDMLRN--IEGVRGSAFNDSLTGSDTAAFESFEGREGDDTINGMGGVDRADYQNSRA 1454
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQ 373
+ N D D L ++E +R + D + LE + L
Sbjct: 1455 GVTVNLANN--TASDDGYGGTDTLLNIENVRGSRDFNDSITGSAADNRLEGLGGNDTLDG 1512
Query: 374 VIGQD 378
G D
Sbjct: 1513 GNGND 1517
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 33/86 (38%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +V + G GND + G+S N+ GND G +G D+ +
Sbjct: 1935 NLIGSAFNDLLTGSSVANMLDGGEGNDTLNGSSGNDTLSGGGGNDRLLGGAGQDSVSGGS 1994
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF 337
+ + I + DF
Sbjct: 1995 GADTFDFNALAETGITSLTWDSISDF 2020
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 5/133 (3%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
G +++L + + G ++ IE+V GS+ D + G+ ANN +
Sbjct: 679 AGSGIQGAFVNLAVGTATDSWGGTDTLSN-----IENVGGSAFGDTITGDDANNFLDGRA 733
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND G +G DT A +A+ D N + + + A S
Sbjct: 734 GNDTLLGDAGADTITGGAGDDSLDGGLQIDALNYSDYNTLSYNGTTGALTINTAAGTASS 793
Query: 354 VNVKQRSILEYTA 366
+ +
Sbjct: 794 STDGNDTFANFYR 806
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 16/160 (10%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
LG++ + Q + TI GG D++ ++L T + + G
Sbjct: 1259 DDTLLGSDRTDLTEQFEGRAGNDTIDGRGGFDIVRY-GSATAGVTVNLVTGTATGAGVGT 1317
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANN----------VFFESSGNDVFDGSSGLDTF 307
+ IE V GS+ +DV+ G +A N VF +GND DG G D
Sbjct: 1318 DTLLN-----IEGVRGSAFDDVLTGGNAANGVTIGDGLSEVFRGEAGNDTIDGGQGYDRV 1372
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
Y + + + + A + D L ++E +R +
Sbjct: 1373 DYTSSTAGVTVTLNDTADGSANDGLGGTDMLRNIEGVRGS 1412
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 6/121 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+SGND +IG ++++ +GND G +G D+ + + Y A + +
Sbjct: 3 TINGTSGNDDLIGTASDDTINGLAGNDTLIGGAGNDSLDGGLGTQDWANYSDAIAPVTVN 62
Query: 330 ANEH------KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D L+ +E + + + L + L G D
Sbjct: 63 LATGAAIGGSGNDTLTGLENIFGSAFNDSLTGDANSNALRGEVGDDTLDGDAGDDYLTGG 122
Query: 384 K 384
Sbjct: 123 A 123
Score = 44.7 bits (104), Expect = 0.050, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 19/180 (10%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--------------GYEKNMTIAQHTVIE 269
D G L IDL+T S+ G G N I +V
Sbjct: 572 DGGTGSDLAYFEDAASGVVIDLSTGVVSNNGEGQVETIINVENLHGSHFNDVIQLSSVGG 631
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--- 326
V G +GND + G N+ F S ND +G G+D ++ + + A +
Sbjct: 632 YVFGRAGNDSLTGGVGNDNFIGGSSNDTVNGGGGVDFVDFFDDGFDSAGSGIQGAFVNLA 691
Query: 327 --VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D LS++E + + + L+ A + L+ G D
Sbjct: 692 VGTATDSWGGTDTLSNIENVGGSAFGDTITGDDANNFLDGRAGNDTLLGDAGADTITGGA 751
Score = 37.4 bits (85), Expect = 7.2, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 35/206 (16%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD------------------LTLIGGVKNYIDLNTESWS 251
+ T+ G+DL+D ++ GV + T S
Sbjct: 1087 DDTLLGGAGADTLIGGAGNDLIDGGLVLDRINGTDYNFVDYVSATAGVNISLSGITGDGS 1146
Query: 252 SIGGYEKNMTIAQHTVIESV---VGSSGNDVVIG-----------NSANNVFFESSGNDV 297
+ G + +V GS+ ND + G + N++ + D
Sbjct: 1147 TGSGAATGDASVGVDTLMNVNQIRGSNFNDTITGSTALIFEQFEGGAGNDILDGGAITDT 1206
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSV 354
+G + ++ A + + + D L++ +R F D + S
Sbjct: 1207 LNGDNDNRVTYHNATGAGVAVDFIAGTAVGAAGSNIGSDTLANFNHVRGSNFDDTLLGSD 1266
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVF 380
E A + + G D+
Sbjct: 1267 RTDLTEQFEGRAGNDTIDGRGGFDIV 1292
>gi|311257207|ref|XP_003127010.1| PREDICTED: matrix metalloproteinase-15-like [Sus scrofa]
Length = 656
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 65/209 (31%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + E R A W + L F+E
Sbjct: 113 YALTGRKWNNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPY 165
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 166 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 225
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + +M+ F
Sbjct: 226 STDLHGNSLFLVAVHELGHALGLEHSSNPSA-------------------IMAPFYQWMD 266
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 267 IDNFQ------LPEDDLRGIQQLYGTPDG 289
>gi|284006497|emb|CBA71758.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 304
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 11/145 (7%)
Query: 199 KGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ GN+ + + TI GDD+L G N I L I G
Sbjct: 30 SGNAGNDTILGDTGDDNLSGNAGDDTILGDEGDDILK----GNAGNDIILGDAGDDEILG 85
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I+ + +++ G SG+D++ G S ++ SGND G SG DT + A + +
Sbjct: 86 DAGNDQISGGSGNDNISGGSGDDMLSGGSGDDTLRGDSGNDRILGGSGDDTMYGDAGNDI 145
Query: 316 YKIYRFENAIIVYDANEHKQDFLSD 340
++ + D L
Sbjct: 146 MS----GDSGNDMLSGGLGNDTLLG 166
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + TI +++ G++GND ++G++ ++ ++G+D G G D A
Sbjct: 10 TISGNAGDDTILGDAGDDNLSGNAGNDTILGDTGDDNLSGNAGDDTILGDEGDDILKGNA 69
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + I+ DA + S + + L + + +
Sbjct: 70 GNDII-LGDAGDDEILGDAGNDQISGGSGNDNISGGSGDDMLSGGSGDDTLRGDSGNDRI 128
Query: 372 IQVIGQDVFESMK 384
+ G D
Sbjct: 129 LGGSGDDTMYGDA 141
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YK 317
+++++ G++G+D ++G++ ++ ++GND G +G D A
Sbjct: 4 FSVIVDTISGNAGDDTILGDAGDDNLSGNAGNDTILGDTGDDNLSGNAGDDTILGDEGDD 63
Query: 318 I--YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I N II+ DA + + + +++ + +L + + L
Sbjct: 64 ILKGNAGNDIILGDAGDDEILGDAGNDQISGGSGNDNISGGSGDDMLSGGSGDDTLRGDS 123
Query: 376 GQDVF 380
G D
Sbjct: 124 GNDRI 128
>gi|229520644|ref|ZP_04410068.1| hypothetical protein VIF_001170 [Vibrio cholerae TM 11079-80]
gi|229342468|gb|EEO07462.1| hypothetical protein VIF_001170 [Vibrio cholerae TM 11079-80]
Length = 1495
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Query: 245 LNTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
L ++S+ G I ++ + G SGND + G N+V SG+D D
Sbjct: 1316 LKIAAFSNAYVDIAHGGGGKDRIYGQGGVDLIFGGSGNDHLYGGDGNDVLRGGSGDDYLD 1375
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
G SG D + E+ D + + D ++D
Sbjct: 1376 GGSGNDILIGGLGDDILTGGSGEDLFKWVDGDLDGSTDRITDFH 1419
>gi|159026020|emb|CAO86274.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 251
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 8/209 (3%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ IY GGD + +L GG L E + S+ G N +I
Sbjct: 26 DKIYGYNGNDILKGNYGNDILDGGD--GNDSLYGGDGEDYLLGGEGFDSLWGDSGNDSIY 83
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G +G+D + G N+ SGND+ G G DT A + + ++
Sbjct: 84 GNYGNDKLYGGNGSDQLFGGYNNDYLTGESGNDLIVGGLGKDTLLGGADADTFVFNTNQD 143
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+++V + + +D ++ + + + +I L + + S
Sbjct: 144 SLLV--SYDVIKDLQIGIDSIDGLTALSAAQVKELGNINGLVPKNSGLTEATLKIFLNSN 201
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
TF S +L D+L
Sbjct: 202 NFLANGA----TTFTFGSQTFLALNDNLA 226
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E N I + + + G+ GND++ G N+ + G D G G D+ + +
Sbjct: 19 IDGKEGNDKIYGYNGNDILKGNYGNDILDGGDGNDSLYGGDGEDYLLGGEGFDSLWGDSG 78
Query: 313 SYL 315
+
Sbjct: 79 NDS 81
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 6/101 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +D + G+ N GND G +G D + + +++
Sbjct: 3 GGYNDDTMHGSPTENQIDGKEGNDKIYGYNGNDILKGNYGNDILDGGDGNDSLY----GG 58
Query: 333 HKQDFLSDVERL--RFADQCIDSVNVKQRSILEYTASYEDL 371
+D+L E + D DS+ + Y + D
Sbjct: 59 DGEDYLLGGEGFDSLWGDSGNDSIYGNYGNDKLYGGNGSDQ 99
>gi|113477328|ref|YP_723389.1| lipase [Trichodesmium erythraeum IMS101]
gi|110168376|gb|ABG52916.1| lipase [Trichodesmium erythraeum IMS101]
Length = 709
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 47/162 (29%), Gaps = 25/162 (15%)
Query: 202 LGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G++I + P I GG+D L+
Sbjct: 500 SGDDIMRGSENDDSLNSGPGNDKIIGKGGNDTLN----------------------SGPG 537
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I + + ++G SGND+++G ++ G D +G G D +
Sbjct: 538 NDKIFGQSGDDYLIGRSGNDILLGGKGDDTLEGGIGRDRLNGGPGNDELIGGGSIDFFIF 597
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ DF D + + D++ S
Sbjct: 598 NTNRPFNEEDLGKDIITDFKVDQDFILLDKSTFDAIESDSSS 639
>gi|323139736|ref|ZP_08074774.1| glycosyl transferase group 1 [Methylocystis sp. ATCC 49242]
gi|322395007|gb|EFX97570.1| glycosyl transferase group 1 [Methylocystis sp. ATCC 49242]
Length = 776
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 9/123 (7%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y Y DL + D + + H+ E G E RD F + YL Y D++
Sbjct: 28 DGFDPVFYRFLYPDLEHL---DDEKLLAHYNEIGWREYRDPCAWFSTAFYLKRYQDVQGA 84
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
HY+THG EGR P +A +S ++ + + H ++
Sbjct: 85 ----GLNPFYHYLTHGRGEGRLPSNMRAKRPASSKRLQVSVIVPNFKNASLLEQHINSIA 140
Query: 475 CEE 477
+E
Sbjct: 141 IQE 143
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 11/85 (12%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y Y DL + D HY G +E R+P A F Y+ ++D+ A
Sbjct: 30 FDPVFYRFLYPDLEH---LDDEKLLAHYNEIGWREYRDPCAWFSTAFYLKRYQDVQGAGL 86
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT 482
+ H+ G EGR +
Sbjct: 87 NP-------FYHYLTHGRGEGRLPS 104
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 12/126 (9%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D F + Y + DL + H++ G E R F + YL Y D+
Sbjct: 28 DGFDPVFYRFLYPDL------EHLDDEKLLAHYNEIGWREYRDPCAWFSTAFYLKRYQDV 81
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ HY+THG EGR P +A +S ++ + H +
Sbjct: 82 QGAG----LNPFYHYLTHGRGEGRLPSNMRAKRPASSKRLQVSVIVPNFKNASLLEQHIN 137
Query: 556 NFGYEE 561
+ +E
Sbjct: 138 SIAIQE 143
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D F + Y + DL D L+ H++ G+ E R F+ YL Y D+
Sbjct: 28 DGFDPVFYRFLYPDL--EHLDDEKLLA----HYNEIGWREYRDPCAWFSTAFYLKRYQDV 81
Query: 580 WNVFGSDRSAAAQHYITHGMKEGR 603
HY+THG EGR
Sbjct: 82 QGA----GLNPFYHYLTHGRGEGR 101
>gi|330828501|ref|YP_004391453.1| RTX protein [Aeromonas veronii B565]
gi|328803637|gb|AEB48836.1| RTX protein [Aeromonas veronii B565]
Length = 2390
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 2/159 (1%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D D+ LIGG N I + G N + +++ G SGND + G S N+
Sbjct: 2185 NDKADV-LIGGEGNDILFGQGGDDILFGGAGNDILFGGAGNDTLYGESGNDTLYGGSGND 2243
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ SG+D G D + + K + + D ++ + F+
Sbjct: 2244 TLYGGSGDDTLSGGLSNDILVGGLGNDILK-GDGGADTFTWLQGDTVVDSVAKDYVVDFS 2302
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D +++ + + S DL ++ H
Sbjct: 2303 KTEGDKLDLSDLLDHDGSHSTTDLKSMLSVFQDNEGVHL 2341
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 67/211 (31%), Gaps = 15/211 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL----------LDLTLIGGVKNYIDL 245
G L N I V P I GDD+ ++ +K Y+
Sbjct: 2099 GVNASDLANAILGTSVNNL--PGSDRIDGGAGDDILFGDAIHFAGINGEGYAAIKQYVAG 2156
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ S + + + + DV+IG N++ F G+D+ G +G D
Sbjct: 2157 KLSAGSVTDAQVHDYITDHASEFDQSSTNDKADVLIGGEGNDILFGQGGDDILFGGAGND 2216
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F A + + + N+ D + L V IL+
Sbjct: 2217 ILFGGAGNDTLYGESGNDTLYGGSGNDTLYGGSGD-DTLSGGLSNDILVGGLGNDILKGD 2275
Query: 366 ASYEDLIQVIGQDVFESMK-HF-YEFGLSEG 394
+ + G V +S+ + +F +EG
Sbjct: 2276 GGADTFTWLQGDTVVDSVAKDYVVDFSKTEG 2306
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 70/227 (30%), Gaps = 34/227 (14%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
GG DY + S D + + +V DI+AV
Sbjct: 1475 GGGTTTGNQQGDYATLGYQIS------------DGANLSNSGKLVIDIMAVADKPVVDIS 1522
Query: 201 SLGNNI--YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN I Y S G+ + G + D T +GG
Sbjct: 1523 LTGNGIPLYTQYPSSGISTGAF----QSGN--FNKGNFGITNSLTDSTTSQDQVVGGNGN 1576
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNS-----------ANNVFFESSGNDVFDGSSGLDTF 307
+ ++ + VG +GNDV++G + N++ G D G +G D
Sbjct: 1577 DYIVSVKGGGDYFVGGAGNDVLVGGNSTSGDTLDGATGNDILVAGLGGDTLFGGAGTDLA 1636
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSDVERLRFADQCI 351
Y I R + + E+ L D+E ++F D
Sbjct: 1637 VLMGSRANYVIERRSDGGFNFLVKENGITISKSLYDIELVQFDDGIY 1683
>gi|297690063|ref|XP_002822449.1| PREDICTED: stromelysin-2-like [Pongo abelii]
Length = 476
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 58/194 (29%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---ETSIHSDI 79
W ++ Y+ T AL W +V LTF E I
Sbjct: 108 WRKTYLTYRIVNYTPDLPR-------DAVDSAIEKALRVWEEVTPLTFSRLYEGEADIMI 160
Query: 80 KFISSNNGYVCTPRYDSRY-----------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
F +G + + +I+FD + W GT L A HE+
Sbjct: 161 SFAFKEHGDFYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHEL 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + N + S D+
Sbjct: 220 GHSLGLFHSANTEA--LMYPLYNSFTELSRFR----------------------LSQDDV 255
Query: 189 VAVQKIYGAPKGSL 202
+Q +YG P S
Sbjct: 256 NGIQSLYGPPPAST 269
>gi|84502943|ref|ZP_01001045.1| calcium binding hemolysin protein, putative [Oceanicola batsensis
HTCC2597]
gi|84388688|gb|EAQ01559.1| calcium binding hemolysin protein, putative [Oceanicola batsensis
HTCC2597]
Length = 9568
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L +I G+ +IA + + G GND + G N+ F +GND+ G +G
Sbjct: 5223 LGNGGADTIDGFGGADSIAGGADGDLIRGGFGNDHLAGQEGNDDIFGGAGNDILSGGAGD 5282
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT + + + + + DA +D+ D + ++E+
Sbjct: 5283 DTLTGGSDEAEFSGHDIFHGGLGDDALSGGA--QNDIYLFGANDGRDTVTDTGGTDLIEF 5340
Query: 365 TAS 367
A
Sbjct: 5341 DAD 5343
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 77/235 (32%), Gaps = 40/235 (17%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ ++ + T+ D G+ D + G + LN ++S G + +
Sbjct: 1994 DTVRLTRDGASENLLITVLDQDGNPTGDSVELVGQFGGVRLNLGAFSEAIGADDGLDFVA 2053
Query: 265 HTVIESVV--------------------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+IE ++ + G+D + G +N +G+D G G
Sbjct: 2054 PNLIEKIIFEKGTTLDYVDIVDRVIKNAKTDGDDAIYGMLNDNTLDGGAGDDFLTGKQGF 2113
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHK---QDFLSDVERLRFADQCIDSVNVKQRSI 361
DT+ + + + ++ + D L + D D++ ++
Sbjct: 2114 DTYIFGRGYGSDVVLDADFGSSLFGPKDDLMTFTDDLRWTDFDYLRDGSGDTLTMRITGT 2173
Query: 362 LE-----------YTASYEDLIQVIGQ------DVFESMKHFYEFGLSEGRDITF 399
+ Y +LI+ + + ++H+ + +EG DI +
Sbjct: 2174 EDEVIFTDFLDEILLVGYINLIEEFEFADGTVWNYLKLLQHYVDIARTEGDDIIY 2228
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 65/210 (30%), Gaps = 46/210 (21%)
Query: 215 DSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTV 267
P I +GG D +D ++ GG DL + + + G E N I
Sbjct: 5215 GGPLGDVILGNGGADTIDGFGGADSIAGGADG--DLIRGGFGNDHLAGQEGNDDIFGGAG 5272
Query: 268 IESVVGSSGNDVVIGNS------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + G +G+D + G S +++F G+D G + D + + A +
Sbjct: 5273 NDILSGGAGDDTLTGGSDEAEFSGHDIFHGGLGDDALSGGAQNDIYLFGANDGRDTVTDT 5332
Query: 322 ENAIIV---------------------YDANEHKQDFL----------SDVERLRFADQC 350
++ L +D+E + F D
Sbjct: 5333 GGTDLIEFDADVAPGDVSVVRIGDDLELRVAGGTTRVLITGAVADPVGTDIEAIAFDDGT 5392
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+E T + L+ ++G +
Sbjct: 5393 TWDRAALLARAMEATEGDDMLVVLVGDTLN 5422
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 6/140 (4%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S G E T+ + G GND + G + SG+D+ DG +G D+
Sbjct: 6908 SIEGFEGTEFGDTLGGDAADNLLRGLDGNDEIEGRGGVDTIEGGSGDDLLDGGAGGDSID 6967
Query: 309 YYAPSYLYKIYRFENAIIVY------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
A + + A+ + + D LS VE L ++ D + L
Sbjct: 6968 GGAGDDTATYFGSDAAVRISLADGTASGGWAEGDTLSGVENLIGSELDDDLEGDSGANAL 7027
Query: 363 EYTASYEDLIQVIGQDVFES 382
+ L G D+
Sbjct: 7028 FGNRGADVLTGGSGDDLLNG 7047
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + +I G + + + +SV+G G+D ++G + +++ F SG+D DG +G D
Sbjct: 4410 TAAAQTIVGLDGDDVLDGQGGDDSVLGLQGDDEIVGGTGSDMLFGGSGDDTLDGGTGGDL 4469
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
A + +Y + + V D+ V+ L F + +
Sbjct: 4470 LAGEAGNDVYDFAPGDGSDTVTDS--------QGVDGLSFG------AGIAPGDVRVVQQ 4515
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ ++++ G + ++ E + FD
Sbjct: 4516 GEDLVLRIAGGEDRVVLQDVLSSASREIETVAFD 4549
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G TIA T +SV G +G D + G + ++ +GND G +G D
Sbjct: 4572 TITGTTGADTIAAGTGDDSVSGLAGADEIDGGAGSDTIAGGTGNDTITGGAGADALTDTG 4631
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ LY + + D D +
Sbjct: 4632 GNELYHFATGDGPDSITD--TSGTDAIQ 4657
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + +++ T +++ G SG+D + G + + GND DG +G D A
Sbjct: 4732 IFGTGISDSLSGGTGDDAIDGRSGDDELSGGAGADTVTGGDGNDTLDGGTGPDLLLGGAG 4791
Query: 313 SYLYKIYRFENAIIVYDAN 331
Y + + DA+
Sbjct: 4792 DDSYLLDIGFGQSTIDDAS 4810
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 51/172 (29%), Gaps = 30/172 (17%)
Query: 198 PKGSLGNNIYKIEV--------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G GN+ Y+ SP Q + + T +G I +
Sbjct: 5706 TSGGAGNDTYRFSAGDGRDIIRDGATSPADQLVIAGYAASQIRFTRLGTDSTDIAVQFTG 5765
Query: 250 WSSIGGYEKNMTIAQHTVIESVV---------------------GSSGNDVVIGNSANNV 288
+++A IE +V G+D + G+ ++
Sbjct: 5766 SDDQIIISDGISLA-GRGIEQIVLEDEGTVFTIPDIVARLVDDQAGEGDDTIFGSDGDDD 5824
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+GND+ G G DT+ Y + +I +++ D +
Sbjct: 5825 LAGGTGNDLIVGGDGDDTYRYASGDGDDRIDALGRGDSRLILSDYAVDDVVS 5876
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 28/71 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I E+V G G+D +I + + +G D+ +G G DT+ +
Sbjct: 5541 LAGTAGDDVIHGSDGAETVAGGDGDDRLITHDGADDLSGGAGVDLLEGGDGDDTYRFGLG 5600
Query: 313 SYLYKIYRFEN 323
++
Sbjct: 5601 DDQDRVSDTGG 5611
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI + +S+ G G D + G N+ G D G +G D F +
Sbjct: 4260 GLSVGETITGGSGDDSLDGQGGGDEISGAGGNDTILGGLGGDTMAGGAGDDALFGGSGDD 4319
Query: 315 LYKIYRFENAIIVYDA 330
+Y+ + ++ DA
Sbjct: 4320 VYEFASGDGVDVITDA 4335
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 34/185 (18%)
Query: 232 DLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
DL + G + S +I G + ++ + + G+ GND ++G +
Sbjct: 4243 DLLAMAGGPAVPGVTQAGLSVGETITGGSGDDSLDGQGGGDEISGAGGNDTILGGLGGDT 4302
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-----------IIVYDANEHKQDF 337
+G+D G SG D + + + + I A + + D
Sbjct: 4303 MAGGAGDDALFGGSGDDVYEFASGDGVDVITDALGADRIAIGAGIDPADIVVSQRGGTDI 4362
Query: 338 L--------------------SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + +E + FAD + S + + TA+ + ++ + G
Sbjct: 4363 ILQVSNSGDRIEMIGAMSGANARIEEVAFADGTVWSHADLLAVLTDGTAAAQTIVGLDGD 4422
Query: 378 DVFES 382
DV +
Sbjct: 4423 DVLDG 4427
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + I + + + G +G D V G N+ +G D+ G +G D++
Sbjct: 4740 SLSGGTGDDAIDGRSGDDELSGGAGADTVTGGDGNDTLDGGTGPDLLLGGAGDDSYLLDI 4799
Query: 312 PSYLYKIYRFENA 324
I
Sbjct: 4800 GFGQSTIDDASGT 4812
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 264 QHTVI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T I +S+ G +G+D + G S ++ +G D G G DT L +
Sbjct: 4733 FGTGISDSLSGGTGDDAIDGRSGDDELSGGAGADTVTGGDGNDTLDGGTGPDLLLGGAGD 4792
Query: 323 NAIIVYDANEHKQ-DFLSDVERLRFADQCIDS 353
++ ++ D S +R+ F + +
Sbjct: 4793 DSYLLDIGFGQSTIDDASGTDRVEFGTGVLAT 4824
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 49/169 (28%), Gaps = 16/169 (9%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---------- 251
+ I +I GDD I L + S
Sbjct: 6946 DTIEGGSGDDLLDGGAGGDSIDGGAGDDTATY-FGSDAAVRISLADGTASGGWAEGDTLS 7004
Query: 252 ---SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E + + + ++ G+ G DV+ G S +++ G D+ G G+DT
Sbjct: 7005 GVENLIGSELDDDLEGDSGANALFGNRGADVLTGGSGDDLLNGGRGADMLFGGDGVDTAD 7064
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
Y I DA D + ++ D N
Sbjct: 7065 YTLSVEGITIDLAAGTAAGGDAEGDVFDSIEIIQASYHDDDLRGDANDN 7113
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 6/124 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+V G +GND + N + GND G + DT+ + A + +
Sbjct: 4121 EAVDGGAGNDTIHTNDGEDTLTGGFGNDFLRGGNQSDTYHFEAGFGQDIVSDNGWS---- 4176
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
N D ++ + D + + + T + +G + ++
Sbjct: 4177 --NNSGADVITFGAGIALEDVRVQATASDLIISIAGTQDRIRIENTVGNANYRIESLLFD 4234
Query: 389 FGLS 392
G S
Sbjct: 4235 DGRS 4238
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G GND + GN A N S G+D+ G G D + + I V
Sbjct: 5419 DTLNGLGGNDTLTGNDAANTIAGSGGDDLLRGQGGDDVYEFGLGDGQDVIEDGAGDNAV 5477
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 26/70 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + I E++ G GND + + ++ +GNDV G + DT+ +
Sbjct: 3673 WAASDADQIIHGGYEAETLDGGGGNDTIQSRNGDDTLTGGTGNDVLSGMNDNDTYRFELG 3732
Query: 313 SYLYKIYRFE 322
+
Sbjct: 3733 FGQDVVSDNG 3742
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 15/161 (9%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L ++ + ++ TI + G DV++GN + G D G +
Sbjct: 5187 LTAANFGGVSIETESTTITDDESASLIAGGPLGDVILGNGGADTIDGFGGADSIAGGADG 5246
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D + + I D LS D + + +
Sbjct: 5247 DLIRGGFGNDHLAGQEGNDDI----FGGAGNDILSG----GAGDDTLTGGSDEAE----- 5293
Query: 365 TASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDITFDSYL 403
+ ++ +G D Y FG ++GRD D+
Sbjct: 5294 FSGHDIFHGGLGDDALSGGAQNDIYLFGANDGRDTVTDTGG 5334
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E++ G G+D + G + +GND G + DT+ + A + +
Sbjct: 3977 EAIEGGGGSDSLYGRDGEDTLTGGTGNDFLRGGNQSDTYHFEAGFGQDIVSDNGWS---- 4032
Query: 329 DANEHKQDFLSD 340
N D ++
Sbjct: 4033 --NNSGTDVITF 4042
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 67/238 (28%), Gaps = 60/238 (25%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-------------------IGGVK 240
G G++ Y +++ S TI D+ G D ++ IG +
Sbjct: 4788 GGAGDDSYLLDIGFGQS----TIDDASGTDRVEFGTGVLATDVSVRKTAEGFELRIGQTE 4843
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESV----------------VGSSGNDVVIGNS 284
+ + L + S G + + A T ++ VG+ G D +IG +
Sbjct: 4844 DRLTLRDAA--SGAGVIETVAFADGTEWDAAELLRRATSGTPGPDSHVGTDGADELIGLA 4901
Query: 285 ANNVFF------------------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ + D G +G D LY +
Sbjct: 4902 GDDTLEGLAGADLLDGGADDDMLSGGADADEMRGGAGNDLLVGGTGGDLYVFRAGDGVDT 4961
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D + D L +E D + + D I V G +
Sbjct: 4962 IDDQGDATADTLR-IEGYALDDVRFSQTGADGADLTIRFDASSDRIVVTGAFAGDDAA 5018
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E++ G++G D + + ++ +G D DG +G DT + +A+
Sbjct: 4571 ETITGTTGADTIAAGTGDDSVSGLAGADEIDGGAGSDTIAGGTGNDTITGGAGADALTDT 4630
Query: 329 DANE 332
NE
Sbjct: 4631 GGNE 4634
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N+ S G + +I + + GS G D + ++V +G+D G G +
Sbjct: 499 NSASVDVFVGAGVDESIYGTLGNDLIFGSGGGDYIESGDGDDVVNAGTGDDTMAGGDGRN 558
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN 331
+Y ++ +
Sbjct: 559 -LIIGGDGDDEVLYNLGSSGVDLTIT 583
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 29/82 (35%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+M +A + + GS G + V G ++ G D G +G+D Y+
Sbjct: 5538 DMALAGTAGDDVIHGSDGAETVAGGDGDDRLITHDGADDLSGGAGVDLLEGGDGDDTYRF 5597
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
++ V D + +
Sbjct: 5598 GLGDDQDRVSDTGGNADTIVLG 5619
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 42/148 (28%), Gaps = 32/148 (21%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ Y+ + T G D + ++G D+ S +
Sbjct: 5591 GDDTYRFGLGDDQDRVSDT---GGNADTI---VLGAGIAPGDVRVAQSSDGSAIILVVGT 5644
Query: 263 AQHTV-IESVVGSSG-------------------------NDVVIGNSANNVFFESSGND 296
+ IE +G +D + G+ +N G+D
Sbjct: 5645 DGDRLRIEDALGDGKVETVQFEDGTVWTVADLLAQVPTGLDDYIYGDEFDNPIEGGPGDD 5704
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G +G DT+ + A I +
Sbjct: 5705 RTSGGAGNDTYRFSAGDGRDIIRDGATS 5732
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L S S ++ + ES+ G+ GND++ G+ + G+DV + +G
Sbjct: 491 LGPASGSG-NSASVDVFVGAGVD-ESIYGTLGNDLIFGSGGGDYIESGDGDDVVNAGTGD 548
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DT L I + ++Y+ D
Sbjct: 549 DTMAGGDGRNLI-IGGDGDDEVLYNLGSSGVDL 580
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 46/171 (26%), Gaps = 30/171 (17%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTES-- 249
GN++Y T+ DS G D L + G + +
Sbjct: 4474 AGNDVYDFAPGDGSD----TVTDSQGVDGLSFGAGIAPGDVRVVQQGEDLVLRIAGGEDR 4529
Query: 250 ------WSSIGGYEKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGND 296
SS + + TV + ++ + G + + +G+D
Sbjct: 4530 VVLQDVLSSASREIETVAFDDGTVWTHAQLVAMAEMADGPHETITGTTGADTIAAGTGDD 4589
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G +G D A S + I + D E FA
Sbjct: 4590 SVSGLAGADEIDGGAGSDTIAGGTGNDTITGGAGADALTDT-GGNELYHFA 4639
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ S+G+D V G+ +V G+D+ G+ G D++ + I +Y
Sbjct: 2851 NAQTSAGSDAVRGSDLADVIDGGLGDDLLQGARGDDSYMFARGDGQDVIEDEHGTDTLYL 2910
Query: 330 ANEHKQDF 337
A +D
Sbjct: 2911 AGYRPEDV 2918
Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 11/133 (8%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A +++ G+ +D + G + ++ SG+D G +G DT +
Sbjct: 4724 AASDAPDAIFGTGISDSLSGGTGDDAIDGRSGDDELSGGAGADTVTGGDGNDTLD---GG 4780
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ +L D+ F ID + R D+ + FE
Sbjct: 4781 TGPDLLLGGAGDDSYLLDI---GFGQSTIDDASGTDRVEFGTGVLATDVSVRKTAEGFE- 4836
Query: 383 MKHFYEFGLSEGR 395
G +E R
Sbjct: 4837 ----LRIGQTEDR 4845
Score = 43.6 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVY 328
V G GND + +V GN++ G SG DT+F+ I E I+
Sbjct: 3120 VFGREGNDWLETGRGADVVHGGLGNELLQGHSGGDTYFFGLGDGQDTIADIERETDGIID 3179
Query: 329 DANEHKQDFLSDVERLR 345
D+E L
Sbjct: 3180 RIRFEAGILPDDIEFLS 3196
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 52/145 (35%), Gaps = 12/145 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFY 309
++ G N T+ + ++ GS G+D++ G ++V F G DV + +G +
Sbjct: 5420 TLNGLGGNDTLTGNDAANTIAGSGGDDLLRGQGGDDVYEFGLGDGQDVIEDGAGDNAVVL 5479
Query: 310 YAP--SYLYKIYRFENAIIVYDANEH-------KQDFLSDVERLRFADQCIDSVNVKQRS 360
A ++ R + +++ D + +RFA + +
Sbjct: 5480 GAGITPEDVRLVRGKATVMLEIVGTGDRIDLGWAPDPAMAIREVRFASGEVWTAQTLVDM 5539
Query: 361 ILEYTASYEDLIQVIGQDVFESMKH 385
L TA +D+I +
Sbjct: 5540 ALAGTAG-DDVIHGSDGAETVAGGD 5563
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 33/139 (23%)
Query: 273 GSSGNDVVIGNSAN-NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-- 329
G+ G++++ GN N N G+D G + D + + A +I +A V D
Sbjct: 2482 GNRGDNLIEGNPDNPNSLDGRQGDDTLVGGTAADIYAFGADYDFDRIVERTDAEGVIDLV 2541
Query: 330 ------------ANEHKQDFLSD------------------VERLRFADQCIDSVNVKQR 359
D + D VE+ RF D S++
Sbjct: 2542 QFGASVTRDALRITRDGDDLIIDLGNGSDVLTIVGGLGSTRVEQFRFGDGSTLSLDEIID 2601
Query: 360 SILEYTASYEDLIQVIGQD 378
+L T + E L+ + +D
Sbjct: 2602 RMLTGTEADEQLVGLDNRD 2620
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 51/170 (30%), Gaps = 36/170 (21%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG------------GDDLLDLTLIGGVKNYIDLNT 247
G G ++Y + + TI D G D + + G + +
Sbjct: 4944 GGTGGDLYVF----RAGDGVDTIDDQGDATADTLRIEGYALDDVRFSQTGADGADLTIRF 4999
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVV--------------------GSSGNDVVIGNSANN 287
++ S IE VV + D V G++ N
Sbjct: 5000 DASSDRIVVTGAFAGDDAATIEEVVIADSLATLTLADIEARVRPDVGADGDTVYGDADAN 5059
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+S D F+G +G DT + ++ ++A+ E + +
Sbjct: 5060 TLNGTSLGDYFEGGAGADTMSGGSGDDIFGDIVADDAVDSMTGGEGRDTY 5109
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 20/148 (13%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G+D++ G + N+ G+D +G S DT+ + A ++ +
Sbjct: 2221 TEGDDIIYGFETINDRIDGGLGDDRLEGQSASDTYVFAAGYGTDTVFDTSGSET------ 2274
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+E ++ I+ + + +I H EF
Sbjct: 2275 --------IEFTGILSTEVEFSRTALDLIISLAGTDDRIILENQYVREHRQTHANEFFQF 2326
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRG 420
R + Y + ++ G++
Sbjct: 2327 ADRTLD-----YTDFNPEDIDLVGTNAA 2349
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG++ + + G++ + G+D+ G+ G D + + I V +
Sbjct: 2343 LVGTNAAETITGSNFSETLDGRGGDDLLIGNDGGDIYLFDVGYDQDVIEDTR----VRAS 2398
Query: 331 NEHKQDFLSDVERL-RFAD 348
++D + V+ + RF D
Sbjct: 2399 WHDREDIIVPVDDIVRFGD 2417
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 58/194 (29%), Gaps = 34/194 (17%)
Query: 203 GNNIYKIEVQQKDSPFI-------------QTIYD-----SGGDDLLDLTLI-GGVKNYI 243
G++ Y+ D + D GG LDL L GV + I
Sbjct: 5839 GDDTYRYASGDGDDRIDALGRGDSRLILSDYAVDDVVSALRGGPQSLDLVLTLPGVDDRI 5898
Query: 244 DLNTESWSSIGGYEKNMTIAQ--HTVIESVVG---------SSGNDVVIGNSANNVFFES 292
L + ++ G ++ I TV + +G+D + G +V S
Sbjct: 5899 VLID-ALGAVNGSPGSLLIEFSDGTVWDRAAMRARTLEDVQGAGDDNLWGFDGADVVHFS 5957
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA---NEHKQDFLSDVERLRFADQ 349
G+D G SG D + + I + D D + R +D
Sbjct: 5958 EGDDFAAGGSGADRYVFGVGDGNDWIDDDGLSSSETDIVELIGFSADDATVSRLFRGSDT 6017
Query: 350 CIDSVNVKQRSILE 363
+ + L
Sbjct: 6018 VLMQFAGNETDSLT 6031
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D G+ + ++ ND G +G DT+ + I N + + DF
Sbjct: 1927 DAYYGSGSGDILLGGLNNDYLSGGAGGDTYIFRPGDGNDVIDDLGNFS--FGPVQAGMDF 1984
Query: 338 LSDVERLRFADQCIDSVNVKQRSIL 362
L + D + + ++L
Sbjct: 1985 LMFRGDITQ-DTVRLTRDGASENLL 2008
>gi|270016725|gb|EFA13171.1| hypothetical protein TcasGA2_TC001812 [Tribolium castaneum]
Length = 932
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 69/206 (33%), Gaps = 70/206 (33%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-----------TSIHSDIKFIS 83
L + + +E+A+ A +W V +L FE S+ DI
Sbjct: 510 WNKTNLKWYFSLATNEMKELAQKAFDQWESVSNLKFEYWHSQPSAVGEYNSVKPDILISF 569
Query: 84 SN-----------NGYVCTPRYDS-------RYFME------INFDKADVWRYGIGKGTI 119
SN +C+ +D +F I+FDK++ W +G T
Sbjct: 570 SNTLFQHNHNSRCQKGICSSSFDGKGNVLAHGFFPNNDECLGIHFDKSENWYFGESSNTP 629
Query: 120 LSHN-----ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM-SYFMPQDSMM 173
LHEIGH LG+ H + N S+M +Y+ +
Sbjct: 630 DDQTNFYTVLLHEIGHTLGIEHSANNN-------------------SIMYAYYKGDIDKL 670
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPK 199
D+ A+Q +YG P+
Sbjct: 671 TR----------DDMWAIQYLYGIPE 686
>gi|241205215|ref|YP_002976311.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859105|gb|ACS56772.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 942
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + +A + + G+ GND+ G + N+ GND+ G +G+DT +
Sbjct: 627 ISGTAFGIDVATGGGSDQLEGTDGNDIFDGGAGNDRIDGYGGNDMLFGGTGIDTAVFSGD 686
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y +N + + +D L+DVE RFAD D S
Sbjct: 687 FASYSF-AIDNGSHILTSALEGKDTLTDVEFARFADGVYDFATETFTS 733
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 6/132 (4%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S ++I N TI+ +++ G GND + G+ + +G D G +G DT
Sbjct: 65 SANAITTGRGNDTISGGNGNDTLNGGEGNDTLNGDDGADTLNGGAGEDTIRGGAGNDTLN 124
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + I D ++D ID+ + + I+ AS
Sbjct: 125 GGDGNDTLDGGQGNDKI----NGGAGNDTITDSAHFNTPKTTIDAGDGDDKVII--LASD 178
Query: 369 EDLIQVIGQDVF 380
E L I
Sbjct: 179 ESLTGAIDGGNG 190
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 6/164 (3%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+SI G + + ++ VG++GND+ G + N+ ++GND+ G G D +
Sbjct: 265 TSITGTAFGIDVTTGAGNDNFVGTAGNDIFDGGAGNDTLHGNAGNDLLTGGEGNDQVYGG 324
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC--IDSVNVKQRSILEYTASY 368
A + + I + D + + D++ D + +++ I++ A
Sbjct: 325 AGNDV--IRGGTGNDTIGDGDFFGPPEVFDIDGGDGNDTVNLQIAYSIENSGIVDGGADT 382
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDD 410
+ L + E G E G F+S+ + YDD
Sbjct: 383 DTLQAYNLTGLTIKNFEILETGGMETIGSAAQFESFEKIVVYDD 426
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 45/148 (30%), Gaps = 10/148 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+YD D ++L ++DL ++ + GND +
Sbjct: 423 VYDDPNYDSYAISLKLTDGVHVDL-AGELATRSAHISGNAFGIDVT-----TGGGNDQLE 476
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSD 340
G N++F +GNDV DG SG D A ++D + D ++
Sbjct: 477 GTDGNDIFDGGAGNDVIDGYSGNDVLRGGAGDDTITDGDDYADAKIFDIDAGNGNDTVT- 535
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASY 368
R +D A
Sbjct: 536 --VFRGSDVEASGTLNGGADTDTLQAYN 561
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 51/180 (28%), Gaps = 39/180 (21%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
TI G+D L+ G + ++ + + ++ G TI +++ G
Sbjct: 70 TTGRGNDTISGGNGNDTLNG---GEGNDTLNGDDGAD-TLNGGAGEDTIRGGAGNDTLNG 125
Query: 274 SSGNDVVIGNSANNVFFESSGNDVF----------------------------------- 298
GND + G N+ +GND
Sbjct: 126 GDGNDTLDGGQGNDKINGGAGNDTITDSAHFNTPKTTIDAGDGDDKVIILASDESLTGAI 185
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DG +G+D + I FE +++ + D I +V
Sbjct: 186 DGGNGIDVLSGLNNLTAFTIQNFEILETGGIHLAGSAAQFESFDKIIYGDNPIYDSSVIS 245
>gi|329851021|ref|ZP_08265778.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
gi|328839867|gb|EGF89439.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
Length = 4917
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D + +T +G + D + S ++ G + I+ + +++ G GND V S N+
Sbjct: 3897 NDNITVTGVGSGGDDNDTLSGS-GTLSGDAGDDLISAGSGNDTLSGGLGNDTVSAGSGND 3955
Query: 288 V---------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-----EH 333
S GND G G DT Y P Y I E + N +
Sbjct: 3956 DVTGGDGGDVLTGSFGNDTLSGGDGTDTAVYAGPRDQYTIVSDEAGGYIIVDNFPENGDE 4015
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D S VE L+FADQ ID I++ +A +D G D
Sbjct: 4016 GTDHFSGVEYLQFADQLIDVTASNFGIIIDGSAIADDKTGTSGND 4060
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 66/200 (33%), Gaps = 11/200 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIY--------DSGGDDLLDLTLIGGVKNYIDLNT 247
GA G N+I + +Y G+D L L+
Sbjct: 2900 GALSGGTDNDIIYAWNLGQGDGGHDALYVVHGGTGEGGEGNDTLAGWDPYYADGVQTLDG 2959
Query: 248 ESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ I G + +++ T ++V G +G+D V G N++ + GND G G DT
Sbjct: 2960 GAGDDVIAGNHGDDSLSGGTGNDTVNGGTGDDSVDGGEDNDLLVGAGGNDSLAGGLGSDT 3019
Query: 307 FFYYAPSYLYKIYR--FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
Y Y + + V + + +D L VE FAD + + I
Sbjct: 3020 AAYDGDRVYYSVIQDGVGGYFTVANRSGEGEDALDGVETAAFADVNLALNSGTAGEIHTG 3079
Query: 365 TASYEDLIQVIGQDVFESMK 384
A L D +
Sbjct: 3080 DADGNSLAGGGLDDSLVGLG 3099
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G G+D + GN+ N+ F+ GND G G+D + Y I
Sbjct: 3300 GGDGNDTIHGGGGDDRMFGNAGNDAFYAEGGNDKIYGGGGVDVAHFSGNRNDYTIVEDGG 3359
Query: 324 AIIVYD---ANEHKQDFLSDVERLRFADQCI 351
IIV D QD L V L FAD
Sbjct: 3360 VIIVTDNRGGTPEGQDTLYGVYTLVFADGDY 3390
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++ +++ GNS NNV +G+D G G DT + Y + V+
Sbjct: 4161 NGTGNALANIITGNSGNNVLTGGAGDDTITGGLGNDTVAFSGARSAYDVTVSGGVYTVH- 4219
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ +S VE +RFAD + V Q + +
Sbjct: 4220 -GPDGTETVSGVEYIRFADGTFEISAVLQVAPV 4251
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 58/190 (30%), Gaps = 16/190 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
D+ T+ G D L + D G N ++ E
Sbjct: 1900 NDYVNDTTGDNTLAGGSGSDTL-VGSGSLSGGEGDDQVTVAGEGYGDAGNDSVDGGAGAE 1958
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGND------------VFDGSSGLDTFFYYAPSYLYK 317
S+ G +G+D + G + ++ GND G SG D Y + Y
Sbjct: 1959 SLYGGAGDDKLRGMAGADLLDGGDGNDILLGDSAQDGNDTIAGGSGYDVAIYSGNASDYT 2018
Query: 318 IYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I V D D L+ VE L F D + + ++ T + + +
Sbjct: 2019 ISTVGGVTTVTDNRPGAPEGSDELTGVELLMFDDGEYELIAPAAGVVVIGTGADDVIPGP 2078
Query: 375 IGQDVFESMK 384
+ + +
Sbjct: 2079 VPFNALDLTG 2088
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 17/157 (10%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVI-----ESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+N +S +GG T ++ + + GND + G ++ GND
Sbjct: 509 INATPFSLLGGLNFLGTSYHDDLLGTQSGDILSAGEGNDTLTGGLGDDTLTGGLGNDSLA 568
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRF-----A 347
G G D + Y + +VY D D L+ +E L+F A
Sbjct: 569 GGDGTDVARFDGLESDYAVSEETIEGVVYTYVADNRDNAPGGIDTLTGIETLQFYTPDPA 628
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + + L A + + G D +
Sbjct: 629 DGPVAIIGTNGSDTLTGGAFNDTVYGYDGNDDVSGLA 665
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 13/147 (8%)
Query: 212 QQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + G+D L + G T +++ G E N +I
Sbjct: 1416 WGGYTAVGSHLIGGDGNDTLVGHSGNSGEGGVSSAITTLPNTLEGGEGNDSI-------- 1467
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G S D++ G + ++ +GND DG +G D + + R + + + D
Sbjct: 1468 -TGGSHEDIITGGAGDDTMVTDTGNDTVDGGAGNDIAVISGNRADFTLERVGDTVTLVDL 1526
Query: 331 NE---HKQDFLSDVERLRFADQCIDSV 354
+ ++ VE LRF DQ + +
Sbjct: 1527 RNAYEGETKIITGVETLRFDDQDVTNE 1553
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 1/133 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N T+ + + ++G G+D + GN N+V + GND +G +G D +
Sbjct: 2753 IFGDIGNDTVTGNGGHDRLIGDQGDDSLSGNDGNDVLYGDGGNDSLNGGAGQDHIYAGEG 2812
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + + L D + L + A L
Sbjct: 2813 ADSVTAGDGNDTVDGDHGGDTIAGGLGD-DSLIGGTGNDTVAGEGGNDTISGDAGTNQLA 2871
Query: 373 QVIGQDVFESMKH 385
G D +
Sbjct: 2872 GGEGADYITNSGD 2884
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 47/142 (33%), Gaps = 21/142 (14%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + + GSSG D +IG N+ GNDV G SG D ++
Sbjct: 2612 TLYGQSSDDYLDGGLGEDQLYGSSGADTLIGGQNNDTLSGGGGNDVIYGGSGSDRAYFSG 2671
Query: 312 PSYLYKIYRFENAIIVYDA---------------------NEHKQDFLSDVERLRFADQC 350
Y I I + D L VE L F+D
Sbjct: 2672 YIAGYVIDNVAGHITITGGAYVITYDVDGDGFVTGEIVVNGPDGSDTLFGVEALVFSDVE 2731
Query: 351 IDSVNVKQRSILEYTASYEDLI 372
+ ++ S +D+I
Sbjct: 2732 LAVQPYSNVGLVLNGTSGDDII 2753
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ +L + Y + + + I G D++ + G I + + + G
Sbjct: 2428 GSGDVTLTGSAYDDSIMGGAT--AEDIAAGAGQDIV--SAGSGADTVI--GGDGFDVLDG 2481
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N +++ ++++G GNDVV G + G+D G +G DT A + L
Sbjct: 2482 GADNDSVSGDAGEDTILGGDGNDVVDGGGDADTLNGGDGDDTVSGGAGNDTISGGAGTDL 2541
Query: 316 YKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ I + D LS +L F D D+V +
Sbjct: 2542 LDGGLGNDTINGNGNLSGGDGNDSLSGTGQL-FGDAGNDTVVASSGTA 2588
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 42/147 (28%), Gaps = 19/147 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + S TI+ G+D + G I G + N
Sbjct: 3412 HSSDDVTSDRPGSNDASSGDDTIWAGAGNDSISGLAGGDE-------------IHGEDGN 3458
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APS 313
T+ T + V G +G+D++ G ++ NDV +G G D +
Sbjct: 3459 DTVEGGTEPDLVYGEAGDDLLNGGDEDDRLDGGDDNDVLNGGGGEDYLLGGDGHDNLSGG 3518
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + N L
Sbjct: 3519 DQDDLLDGGAGNDTVNGNAGADTVLGG 3545
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 11/178 (6%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N+ T+ + G+SGND + G+ + V G+D DG +G+DT + Y
Sbjct: 4327 DGNIATVSLTLNHLIAGTSGNDSLAGSGLDEVLRGLGGHDSLDGGAGIDTLIGGDGNDTY 4386
Query: 317 KIYRFENAIIVYDANEHKQDFL------SDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
I + + DA + ++VE L I+ +++
Sbjct: 4387 VIADSDTVVEAADAGSDTVEASITYNLGTNVENLTLTGSANINGTGNAGDNVVTGNTGVN 4446
Query: 370 DLIQVIGQDVF--ESMKHFYEFGLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAAA 423
L +G D F ++ EG D+ S Y +G Y + ++ GSD A
Sbjct: 4447 VLTGGLGNDTFWVQNATDTVVEANGEGNDLIVASVSYSLVGRYAERLSLTGSDDLTAT 4504
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N + +S+ G GND +IG+ + +G+DV +G SG+DT +
Sbjct: 4052 DKTGTSGNDFLRGFGGQDSLTGLDGNDTLIGDDDGDSLTGGAGSDVLNGGSGIDTLIGGS 4111
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL 338
Y I +N+ ++ +A D +
Sbjct: 4112 GDDTYVID--DNSDLITEAGSAGTDLV 4136
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 1/132 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + TIA + +S G G+D + G N+ +GND +SG ++ A +
Sbjct: 2272 GGAGSDTIAANWGDDSAAGGEGDDQITGYYGNDTLSGDAGNDTLSDNSGSNSLSGGAGND 2331
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
L + + ++ L + + + D + R++
Sbjct: 2332 LVSGGDDNDTLSGGVDDDTLTGGLGN-DVIDGGDGTDVTGLSGNRALYSVIRDGAGGYYA 2390
Query: 375 IGQDVFESMKHF 386
+ + H
Sbjct: 2391 VNNRGTDGSDHL 2402
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 5/140 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S G + I +S+ G+ GND + G + + +GND G +G DT
Sbjct: 1821 SADGGDGADIIYGSYGEDSLSGAEGNDTLYGETGQDELSGGTGNDYLAGGNGNDTADGGD 1880
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+++ D N++ D D + S +D
Sbjct: 1881 GQDQLYGEAGDDSTSGGDGNDYVNDTTGDN-----TLAGGSGSDTLVGSGSLSGGEGDDQ 1935
Query: 372 IQVIGQDVFESMKHFYEFGL 391
+ V G+ ++ + G
Sbjct: 1936 VTVAGEGYGDAGNDSVDGGA 1955
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 2/142 (1%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-I 253
Y + ++ +Y +D+ I G + L + + + S +
Sbjct: 585 YAVSEETIEGVVYTYVADNRDNAPGG-IDTLTGIETLQFYTPDPADGPVAIIGTNGSDTL 643
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N T+ + + V G +GND + S ++ +GNDV +G SGLD
Sbjct: 644 TGGAFNDTVYGYDGNDDVSGLAGNDSLSAGSGDDSLDGGAGNDVLNGGSGLDVLNGGDGD 703
Query: 314 YLYKIYRFENAIIVYDANEHKQ 335
+ +A+ N++
Sbjct: 704 DVITDEEGASAVDAGGGNDYVT 725
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 20/131 (15%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+Y A G+ G+ I E G+D +D + +L T
Sbjct: 734 AGDDSLYSANYGTAGDTIDGGE----------------GNDTVDASENNSDSA--NLLTG 775
Query: 249 SWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + + I+ +++ +G D + G N+ S G+DV + G DT
Sbjct: 776 GLGDDYLTGADYDDDISGGDGNDALYAGNGADTLTGGEGNDYISTSDGDDVINTGLGDDT 835
Query: 307 FFYYAPSYLYK 317
+ S L
Sbjct: 836 VYSSGRSNLTT 846
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 54/168 (32%), Gaps = 10/168 (5%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ GGDD + + + GG N L + + G + + T + V G
Sbjct: 3093 DSLVGLGGDDTVSGGNGNDIVRGGDGNDSVLAGSGYDVVYGDAGDDHVDAGTGEDQVRGG 3152
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND V+G N+ + G D G G D + N +I
Sbjct: 3153 DGNDTVLGGDDNDTVYGDGGTDSLSGGDGADALYGNGTIS----GGTGNDLIHGSGTLSG 3208
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D +E A N I Y A + + G DV S
Sbjct: 3209 DDGADTIELTGAAQVFGGDGNDTISEIWPYFAD-QSVSGEAGDDVLNS 3255
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 8/145 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDS---PFIQTIYDSGGDDLLDLT----LIGGVKNYIDLNTE 248
G+ S G++ I+ G+D ++ L+ G LN
Sbjct: 3423 GSNDASSGDDTIWAGAGNDSISGLAGGDEIHGEDGNDTVEGGTEPDLVYGEAGDDLLNGG 3482
Query: 249 SWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G + N + + ++G G+D + G +++ +GND +G++G DT
Sbjct: 3483 DEDDRLDGGDDNDVLNGGGGEDYLLGGDGHDNLSGGDQDDLLDGGAGNDTVNGNAGADTV 3542
Query: 308 FYYAPSYLYKIYRFENAIIVYDANE 332
+ L + +N + N+
Sbjct: 3543 LGGEGADLVVDSQGDNLLSGGGGND 3567
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 44/147 (29%), Gaps = 10/147 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G++I D+ +D D D +L G N + S+ G
Sbjct: 2745 NGTSGDDII-FGDIGNDTVTGNGGHDRLIGDQGDDSLSGNDGNDVLYGDGGNDSLNGGAG 2803
Query: 259 NMTIAQHTVIESVVGSSGNDV---------VIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
I +SV GND + G ++ +GND G G DT
Sbjct: 2804 QDHIYAGEGADSVTAGDGNDTVDGDHGGDTIAGGLGDDSLIGGTGNDTVAGEGGNDTISG 2863
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQD 336
A + + I D
Sbjct: 2864 DAGTNQLAGGEGADYITNSGDGTATGD 2890
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 54/145 (37%), Gaps = 2/145 (1%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T+ G I L S+ + + ++ ++V +G D + G + N++ + S
Sbjct: 1565 TIAGTAAGEIILALGGNDSVTADQGDDSVEGGGGNDTVYAGNGADTIDGGADNDLLYGES 1624
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND G G DT Y+ +++ + D +D +A Q +
Sbjct: 1625 GNDSLSGGMGNDTVEDYSGVNTMSGGAGSDSLTGAGTLDGGDD--NDTLSAYYAGQAVTL 1682
Query: 354 VNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ + + + + G D
Sbjct: 1683 LGGAGADLIYSSGASDSVDGGTGDD 1707
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 5/159 (3%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D L G + ++ + S I G + N I +++ GND V G++
Sbjct: 3772 DGNDTL---SAGFGNDTLEGAQGADS-IDGADGNDIIEGGDDADAITAGLGNDHVWGDAG 3827
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++V G+D + SG DT A N + + + D S + L
Sbjct: 3828 SDVIDAGGGSDTIEAGSGDDTVSGGAGDDTLT-GDDGNDTLSDTSGTNWLDGGSGNDALN 3886
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ + +D + G
Sbjct: 3887 GTGTVDGGTGNDNITVTGVGSGGDDNDTLSGSGTLSGDA 3925
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 5/112 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+Y +GG D +D T G + L + +I N +I
Sbjct: 1017 GANDTITALEGNDYLYGNGGADSVDAGAGDDTFYGSSGDDTVLGGDGADNIDAGHGNNSI 1076
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + + +GND G S ++ + GN+ G G D+ +
Sbjct: 1077 SGGADNDYIYLQNGNDTAEGGSGDDYVYGGRGNNSMSGGDGNDSLYGAGALD 1128
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 17/133 (12%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + TI + + V SG+DVV+G AN+V GND G SG DT
Sbjct: 2082 NALDLTGSDTIDAGSGGDQVEAGSGHDVVLGRLANDVLNGEYGNDTLIGGSGDDTLLGAT 2141
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + D AD D R L+ A + L
Sbjct: 2142 GNDVLYGSDGAAGGYSDD-----------------ADGNTDGHPDFDRDSLDGGAGNDTL 2184
Query: 372 IQVIGQDVFESMK 384
I G+D
Sbjct: 2185 IGGNGEDRLTDWA 2197
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 3/183 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G+ + + + +GG+ + +GG I S GG
Sbjct: 3676 GEAALTGGDVVDGTTASEALTGSANDDLITGGEGGDTILGLGGNDVIIS-GDGDDSLSGG 3734
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I ++V G SG+D+V+ + +++ GND G DT
Sbjct: 3735 ISGNDRIEAGDGNDTVDGLSGDDIVLAGAGDDLVLGYDGNDTLSAGFGNDTL--EGAQGA 3792
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I + I+ ++ + D D ++ S S +D +
Sbjct: 3793 DSIDGADGNDIIEGGDDADAITAGLGNDHVWGDAGSDVIDAGGGSDTIEAGSGDDTVSGG 3852
Query: 376 GQD 378
D
Sbjct: 3853 AGD 3855
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 9/116 (7%)
Query: 273 GSSGNDVV------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G GND V G + ++V SS D +G G DT Y + E +
Sbjct: 3594 GGDGNDTVSGSGTLGGGAGDDVINGSSAADSINGGDGDDTVNIAGSRAGYALVADEGDYL 3653
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++ D ++ VE L F D +++ T + E L D+
Sbjct: 3654 LIRLSDGVTDTITGVEHLIFGDGEAALTG---GDVVDGTTASEALTGSANDDLITG 3706
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 8/165 (4%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++L L G I +S+ G + ++ ++V G +GND+V G N+
Sbjct: 3064 VNLALNSGTAGEIHTGDADGNSLAGGGLDDSLVGLGGDDTVSGGNGNDIVRGGDGNDSVL 3123
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSDVERLR 345
SG DV G +G D + + ++ D N + D LS +
Sbjct: 3124 AGSGYDVVYGDAGDDHVDAGTGEDQVRGGDGNDTVLGGDDNDTVYGDGGTDSLSGGD--- 3180
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
AD + + + + L G D E FG
Sbjct: 3181 GADALYGNGTISGGTGNDLIHGSGTLSGDDGADTIELTGAAQVFG 3225
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 2/98 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+++ + S G + N T++ + + G GND ++G
Sbjct: 2 GTDMVNYIGTENDDTF--SGAGGEDSAHGNDGNDTLSGGENRDYLHGDGGNDSLVGGEWG 59
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + +GND G G+D + ++
Sbjct: 60 DYLYGGTGNDTLVGGVGVDVLHGGEGDDRFVFTFGDST 97
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 28/82 (34%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ E ++ ++V G GND V G ++ +G D G G DT
Sbjct: 1311 SVDAGEGEDYVSGGGSHDTVTGGGGNDQVYGELGDDSISGGTGADTLYGEDGDDTLSGGD 1370
Query: 312 PSYLYKIYRFENAIIVYDANEH 333
+ + + DA
Sbjct: 1371 DADFIDAGYGDGNSVTGDAGND 1392
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 42/133 (31%), Gaps = 4/133 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G E TIA E ++ GND V + ++ GND +G DT A
Sbjct: 1556 TINGTEDGETIAGTAAGEIILALGGNDSVTADQGDDSVEGGGGNDTVYAGNGADTIDGGA 1615
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ L + + + D + D + S ++ L+ + L
Sbjct: 1616 DNDLL----YGESGNDSLSGGMGNDTVEDYSGVNTMSGGAGSDSLTGAGTLDGGDDNDTL 1671
Query: 372 IQVIGQDVFESMK 384
+
Sbjct: 1672 SAYYAGQAVTLLG 1684
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 1/116 (0%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ ND + N+ + + G D D +G DTF+ + + I
Sbjct: 1011 DNLNGTGANDTITALEGNDYLYGNGGADSVDAGAGDDTFYGSSGDDTVLGGDGADNIDAG 1070
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N +D + + + + + + G D
Sbjct: 1071 HGNNSISGG-ADNDYIYLQNGNDTAEGGSGDDYVYGGRGNNSMSGGDGNDSLYGAG 1125
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 32/137 (23%), Gaps = 4/137 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + TI ++V G D V + +D G G D +
Sbjct: 1287 GTIADDTITAFDGNDTVYAGGGEDSVDAGEGEDYVSGGGSHDTVTGGGGNDQVYGELGDD 1346
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
E D LS + F D N T +
Sbjct: 1347 SIS----GGTGADTLYGEDGDDTLSGGDDADFIDAGYGDGNSVTGDAGNDTLYGAGTLDG 1402
Query: 375 IGQDVFESMKHFYEFGL 391
D ++Y G
Sbjct: 1403 GDGDDHVQTNYYYWGGY 1419
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 35/124 (28%), Gaps = 20/124 (16%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF-- 289
D+ G L + + H +++ G+SG+D + G +
Sbjct: 168 DVWGTTGSPQIQSLIIGG--QTYSLTGGLALTGHDWSDNMQGTSGDDTMSGLLGYDTLRG 225
Query: 290 ----------------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ GND G D F A S Y + V+ ++
Sbjct: 226 RDGDDQIDGGGDYDNLYGGDGNDTLTGGGDSDDLFGEAGSDRYVFAAGDGHDRVHLSDGG 285
Query: 334 KQDF 337
D
Sbjct: 286 GADT 289
Score = 44.7 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 37/131 (28%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ T E++ GS+ +D++ G + GNDV G D+
Sbjct: 3679 ALTGGDVVDGTTASEALTGSANDDLITGGEGGDTILGLGGNDVIISGDGDDSLSGGISGN 3738
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N + + + + + + D LE + +
Sbjct: 3739 DRIEAGDGNDTVDGLSGDDIVLAGAGDDLVLGYDGNDTLSAGFGNDTLEGAQGADSIDGA 3798
Query: 375 IGQDVFESMKH 385
G D+ E
Sbjct: 3799 DGNDIIEGGDD 3809
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 70/212 (33%), Gaps = 11/212 (5%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ G+N+ T + D + G N + + + S+S +G
Sbjct: 4431 TGNAGDNVVTGNTGVNVLTGGLGNDTFWVQNATDTV--VEANGEGNDLIVASVSYSLVGR 4488
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y + +++ + + N + GN+ +N+ +GND G +G DTF +
Sbjct: 4489 YAERLSLTGSDDLTATGNGQFN-ALNGNAGHNLVDGGAGNDTMAGGAGNDTFVVNTTGDV 4547
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
E V + +++E L + + L + L
Sbjct: 4548 VNENADEGTDTVRSSVTFTLG--ANLENLVLTGLAAVSGTGNGLNNSLTGNIAVNILTGG 4605
Query: 375 IGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
G D +++ EG D+ S Y
Sbjct: 4606 AGDDTYYIQTVGDTVVEVSGEGNDLVVSSVSY 4637
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 1/138 (0%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ +I ++T+ +S++G + + + + ++ SG D G G D
Sbjct: 2419 AGNTGTIITGSGDVTLTGSAYDDSIMGGATAEDIAAGAGQDIVSAGSGADTVIGGDGFDV 2478
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
A + E+ I+ D N D D + L D + A
Sbjct: 2479 LDGGADNDSVSGDAGEDTILGGDGN-DVVDGGGDADTLNGGDGDDTVSGGAGNDTISGGA 2537
Query: 367 SYEDLIQVIGQDVFESMK 384
+ L +G D
Sbjct: 2538 GTDLLDGGLGNDTINGNG 2555
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----DLNTESWS-SIGGYEKNMT 261
+ + + + GDD + +G + DL S S + G
Sbjct: 4588 GLNNSLTGNIAVNILTGGAGDDTYYIQTVGDTVVEVSGEGNDLVVSSVSYDLNGRHVETL 4647
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ G+S +++ GN+ NN+ +G D F G G DT+ S +
Sbjct: 4648 TLTGSANIDGTGNSLANMLNGNAGNNLLDGGAGYDTFAGGDGNDTYIVNLSSEIVTEGLN 4707
Query: 322 ENAIIVYDANEH 333
+ V +
Sbjct: 4708 QGTDTVLSSATF 4719
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T+ GDD L V D +S + +S+ G +GN
Sbjct: 2124 GNDTLIGGSGDDTLLGATGNDVLYGSDGAAGGYSDDADGNTDGHPDFDR--DSLDGGAGN 2181
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
D +IG + + + +GN++ G D
Sbjct: 2182 DTLIGGNGEDRLTDWAGNNLLQGGDDGDVLIGNGT 2216
>gi|319638283|ref|ZP_07993046.1| hypothetical protein HMPREF0604_00670 [Neisseria mucosa C102]
gi|317400556|gb|EFV81214.1| hypothetical protein HMPREF0604_00670 [Neisseria mucosa C102]
Length = 811
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 5/112 (4%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L G N I + S + + G + N I +++ G SG+DV+ G ++
Sbjct: 568 SLHLGENNIITITDSSHALVSGGDGNDRIRGSLGNDTINGDSGDDVIFGYDGDDRLNGGI 627
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDFLSD 340
GND G +G DT + + F I Y D
Sbjct: 628 GNDSVHGGNGNDTLWGESGDDRLSGGDGDDVLFGGQGIDYLVGGKGADTYVF 679
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 41/148 (27%), Gaps = 45/148 (30%)
Query: 199 KGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+++ Y + + +++ G+D L
Sbjct: 606 NGDSGDDVIFGYDGDDRLNGGIGNDSVHGGNGNDTL------------------------ 641
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G SG+D + G ++V F G D G G DT+ +
Sbjct: 642 ----------------WGESGDDRLSGGDGDDVLFGGQGIDYLVGGKGADTYVFSLGEGK 685
Query: 316 YKIYRFENA--IIVYDANEHKQDFLSDV 341
I + + N D DV
Sbjct: 686 DTIIDNVGEHNALQFGQNISVNDLHIDV 713
>gi|194292665|ref|YP_002008572.1| hypothetical protein RALTA_B1940 [Cupriavidus taiwanensis LMG
19424]
gi|193226569|emb|CAQ72520.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
Length = 1062
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 28/205 (13%)
Query: 230 LLDLTLIGGVKNYIDL----NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
+D + + G I + + +++ IG ++ A ++ +++ G +G+D + GN
Sbjct: 802 TIDASALKGSGVTIVMEDPSDAAAFTFIGSGNDDLVYASNSA-DTLNGGAGDDTLFGNGG 860
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+V +GND G G D A V F + ++
Sbjct: 861 ADVINGGAGNDELFGGEGNDKIDGGAGDD---FIAGGLHSDVLTGGAGADSFYFNFDQNH 917
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
A+ + A+ +D+I + LS G D Y
Sbjct: 918 LAEAGKST--------NPGAAAKQDVITDFKVAEDTILVD-VTNPLSAG-----DYAFY- 962
Query: 406 GSYDDLRNVFGSDRGAAARHYITHG 430
+ N G++ A +YI G
Sbjct: 963 -----VTNAPGANGFPAFAYYIGDG 982
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 11/193 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+N + TI D T IG + + + S ++ G + T+
Sbjct: 797 DNNFATIDASALKGSGVTIVMEDPSDAAAFTFIGSGNDDLVYASNSADTLNGGAGDDTLF 856
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----- 318
+ + + G +GND + G N+ +G+D G D A + +
Sbjct: 857 GNGGADVINGGAGNDELFGGEGNDKIDGGAGDDFIAGGLHSDVLTGGAGADSFYFNFDQN 916
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ E KQD ++D + A+ I S +Y + G +
Sbjct: 917 HLAEAGKSTNPGAAAKQDVITD---FKVAEDTILVDVTNPLSAGDYAFY---VTNAPGAN 970
Query: 379 VFESMKHFYEFGL 391
F + ++ GL
Sbjct: 971 GFPAFAYYIGDGL 983
>gi|17544965|ref|NP_518367.1| calcium binding hemolysin protein [Ralstonia solanacearum GMI1000]
gi|17427255|emb|CAD13774.1| putative calcium binding hemolysin protein [Ralstonia solanacearum
GMI1000]
Length = 1156
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 69/199 (34%), Gaps = 19/199 (9%)
Query: 155 NDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
N S +V SYF + + A D+ AV+ + P +N+Y
Sbjct: 485 NSSDKITVQSYFYSDATGPYRIDQVHFADGTSWDVAAVKALVQVPTSGT-DNLYGYASDD 543
Query: 214 --KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
T+ GG+D L ++ G + N +I + +
Sbjct: 544 VLNGLDGNDTLRGYGGNDTLRG-------------DAGADTVYGGDGNDSIDGGADNDYL 590
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YD 329
G +G+D + G+S N+ + +GND +G +G D S Y + YD
Sbjct: 591 YGEAGDDALQGSSGNDTLYGGNGNDTLEGGAGNDYLVGNEGSDTYVFNTGWGQDTIYNYD 650
Query: 330 ANEHKQDFLSDVERLRFAD 348
A + D + + D
Sbjct: 651 ATSERSDVIEFGSGIAATD 669
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 71/192 (36%), Gaps = 14/192 (7%)
Query: 155 NDSFLTSVMSYFMPQDSM---MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S +V SYF + +D T D+ AV+ + P +N+Y
Sbjct: 885 NSSDKITVQSYFYSDATGPYRIDQVRFADGT--SWDVAAVKALVQVPTSGA-DNLYGYAS 941
Query: 212 QQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVI 268
TI GG+D L G +L + + G N +
Sbjct: 942 DDVLNGLDGNDTIRGYGGNDTLR-----GEAGADNLFGGDGNDVLDGGADNDYLYGEAGD 996
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S++G SGND + G + N+ +GND G+ G DT+ + + IY ++ +
Sbjct: 997 DSLLGGSGNDNLYGGNGNDTLEGGAGNDYLVGNEGSDTYVFNSGWGQDSIYNYDTSTGRS 1056
Query: 329 DANEHKQDFLSD 340
D +D
Sbjct: 1057 DVIAFGDGIATD 1068
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 53/286 (18%), Positives = 92/286 (32%), Gaps = 28/286 (9%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE----IG 129
+ N + Y + V+ G G+ TI +++A E I
Sbjct: 601 GSSGNDTLYGGNGNDTLEGGAGNDYLVGNEGSDTYVFNTGWGQDTIYNYDATSERSDVIE 660
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM---MDASFGYCATPMVS 186
G+ + N S +V SYF S +D T
Sbjct: 661 FGSGIA-ATDVIATRSGDDLILSLRNGSDKVTVQSYFYSDASGPYRIDQVRFADGT--SW 717
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
D+ AV+ + P +N+Y TI GG+D L
Sbjct: 718 DVAAVKALVQVPTSGA-DNLYGYASDDVLNGLDGNDTIRGYGGNDTLRG----------- 765
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
++ G + N + + + G SG+D ++G S N+ + +GND +G +G
Sbjct: 766 --EAGADNLFGGDGNDVLDGGADNDYLYGESGDDSLLGGSGNDNLYGGTGNDTLEGGAGN 823
Query: 305 DTFFYYAPSYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRFAD 348
D S Y + YD + D ++ + + +D
Sbjct: 824 DYLVSNEGSDTYVFNSGWGQDTIYNYDTTAGRSDVIAFGDGIAASD 869
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 17/232 (7%)
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
N S +V SYF + + V + +N+Y +
Sbjct: 85 NSSDKVTVQSYFNSDATGAYRVDLIRFADGTTWDVKTVSTKTIGATNAADNLYGYATDDE 144
Query: 215 DSP--FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ TI GG+D L ++ G + N +I + +
Sbjct: 145 INGLDGNDTIRGYGGNDTLRG-------------DAGADTVYGGDGNDSIDGGADNDYLY 191
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDA 330
G +G+D ++G S N+ + +GND +G +G D S Y + YD
Sbjct: 192 GEAGDDRLLGGSGNDTLYGGNGNDTLEGGAGNDYLVGNEGSDTYVFNSGWGQDTIYNYDT 251
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D ++ + D L + + D
Sbjct: 252 TAGRSDVITFGTGIAATDVIATRSGDDLILSLRNGSDKVTVQSYFNSDATGP 303
Score = 44.7 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 58/207 (28%), Gaps = 29/207 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL----------TLIGGVKNYIDLNTES 249
+ G++ Y +G D++ G + L S
Sbjct: 828 SNEGSDTYVFNSGWGQDTIYNYDTTAGRSDVIAFGDGIAASDIIATRSGDDLILSLRNSS 887
Query: 250 ---------WSSIGG--YEKNMTIAQHTVIESVVG-------SSGNDVVIGNSANNVFFE 291
+S G + A T + +SG D + G ++++V
Sbjct: 888 DKITVQSYFYSDATGPYRIDQVRFADGTSWDVAAVKALVQVPTSGADNLYGYASDDVLNG 947
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND G G DT A + N ++ A+ + + L
Sbjct: 948 LDGNDTIRGYGGNDTLRGEAGADNL-FGGDGNDVLDGGADNDYLYGEAGDDSLLGGSGND 1006
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQD 378
+ LE A + L+ G D
Sbjct: 1007 NLYGGNGNDTLEGGAGNDYLVGNEGSD 1033
>gi|332708288|ref|ZP_08428269.1| RTX toxins family Ca2+-binding protein [Lyngbya majuscula 3L]
gi|332352953|gb|EGJ32512.1| RTX toxins family Ca2+-binding protein [Lyngbya majuscula 3L]
Length = 2105
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 61/182 (33%), Gaps = 24/182 (13%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS--------------------IGGYEKNMTIAQ 264
+GG D + T + DLN + + I G TI
Sbjct: 1701 TGGFDSDNATSGYISRQRTDLNGQQLNDAISFFNIERSQIIGTIQSDNIQGGGGFDTIFA 1760
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G +GND + + +++ +G DV DG G DT Y + E +
Sbjct: 1761 GVGDDLISGGNGNDRIQADDGDDILIGGAGADVLDGGEGQDTASYENARFSGVYVDLEKS 1820
Query: 325 ----IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + ++ D L +E L + Q + L A ++L G D
Sbjct: 1821 FQEFVYLNPFSDAAGDQLISIENLHGSIYDDWLFGNNQANQLYGDAGNDNLTGKGGADTL 1880
Query: 381 ES 382
+
Sbjct: 1881 DG 1882
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 28/224 (12%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVAVQKIYGAPK------G 200
G D ++ + V Y + S + + + D +++++ ++G+
Sbjct: 1799 GQDTASYENARFSGV--YVDLEKSFQEFVYLNPFSDAAGDQLISIENLHGSIYDDWLFGN 1856
Query: 201 SLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-------- 250
+ N +Y T+ G + + I+L T +
Sbjct: 1857 NQANQLYGDAGNDNLTGKGGADTLDGGSGINTASYSN-SLEGVRINLETGNILGGDAEGD 1915
Query: 251 -----SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+I G ++ ++A + ++ G G+D++ GN N+ G+D +G SG D
Sbjct: 1916 TLINIQNITGSSQDDSLAGDSSSNNLRGLEGDDLLQGNGNNDTLLGGDGSDTLEGGSGND 1975
Query: 306 TFFYYAPSYL---YKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ S + + + D+ +
Sbjct: 1976 VLKGTSNSNNVQEVDVLTGGDGADEFYLGNSSSDYYKASDSYAI 2019
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 16/142 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + ++++ G+ G+D + G N+V GND F+G G +T
Sbjct: 1237 IKGGGNDDELFGGSGLDTLEGNDGDDFLSGGKGNDVLKGGKGNDFFEGGEGNNTIDGGKD 1296
Query: 313 SYLY----------------KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
K+ + I + D + +VE+ ++
Sbjct: 1297 DDGKDVDAISYANETEGITGKLAPDADGKIYVKRANGQTDTIINVEQFDLTNKDDVMTGT 1356
Query: 357 KQRSILEYTASYEDLIQVIGQD 378
Q + + D I +G D
Sbjct: 1357 DQNNEVIDGLDGNDKIYGLGGD 1378
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 56/161 (34%), Gaps = 17/161 (10%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G L+ IDL +++ G + I+ IE ++ + D + GN
Sbjct: 1415 GDGTSYLN----SFAGVRIDL-ETGFATGGEATGDQLIS----IEHILATIHPDDLRGNE 1465
Query: 285 ANNVFFESSGNDVFDGSSGLDT--------FFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
N+ S GNDV +G G D FF + + I V +
Sbjct: 1466 KANILNGSEGNDVIEGREGADQLDGGGVRGFFGSSDKDVLSYESSSTGIAVSLKDGKGTG 1525
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ + + FA S K S T S +D ++ G
Sbjct: 1526 GEANGDSIAFAFFEKTSEFSKYSSFENLTGSNQDDNKLEGD 1566
Score = 45.5 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 22/145 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--- 252
G S N++ + + + + D+ GD L+++ I G L +S S+
Sbjct: 1885 GINTASYSNSLEGVRINLETGNILGG--DAEGDTLINIQNITGSSQDDSLAGDSSSNNLR 1942
Query: 253 -------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN------VFFESSGNDVFD 299
+ G N T+ +++ G SGNDV+ G S +N V G D F
Sbjct: 1943 GLEGDDLLQGNGNNDTLLGGDGSDTLEGGSGNDVLKGTSNSNNVQEVDVLTGGDGADEFY 2002
Query: 300 -GSSGLDTFFYYAPSYLYKIYRFEN 323
G+S D YY S Y I N
Sbjct: 2003 LGNSSSD---YYKASDSYAIITDFN 2024
Score = 44.7 bits (104), Expect = 0.049, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 44/153 (28%), Gaps = 15/153 (9%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G++ + G N+ + GND G G D F +++ V A++
Sbjct: 1565 GDLGHNEIRGLEGNDNLYGDGGNDTLIGGVGADKFNGGEGEDWADYSEALSSVGVDLASQ 1624
Query: 333 H--KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ E+ + D I D+ F +
Sbjct: 1625 GFRGEGTGDTFEKQNSQSTTENLKGSPYGDTFFGDIGNND----IDPDISSGETDFVDG- 1679
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
EG D+ L +RN +GS
Sbjct: 1680 -REGDDL-------LIVNYGIRNDWGSGITGGF 1704
>gi|291614062|ref|YP_003524219.1| outer membrane adhesin like proteiin [Sideroxydans lithotrophicus
ES-1]
gi|291584174|gb|ADE11832.1| outer membrane adhesin like proteiin [Sideroxydans lithotrophicus
ES-1]
Length = 3778
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 93/278 (33%), Gaps = 35/278 (12%)
Query: 69 TFEET-SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI-LSHNALH 126
T E + SD+ + S+++ Y T + + I D + + +G G + +
Sbjct: 1363 TLTEVGTSGSDVLYGSNSSSYSDTLIGGAGNDLLIGGRGNDTYVFNLGDGADNIIDTGVS 1422
Query: 127 EIGHALG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
++ H LG L +D ++ D +D G T
Sbjct: 1423 DMAHGLGINVLSFGAGITADMITVQLDGEFG---------------DVTLDLGGGDSVTI 1467
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD------LTLIG 237
D+ G +I +++ + ++ G D++ L
Sbjct: 1468 GQIDLNT--------NDLNGISIEQLKFADGSTITPFELFAQKGLDVIGGDMVDVLQGAA 1519
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
N + S + G N + + + G G+D + G + N+ GNDV
Sbjct: 1520 NWTNRMQGGAGDDS-LSGGSINDILDGGDGNDWLDGGLGSDTLNGGAGNDQLSGGYGNDV 1578
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G +G DT F S Y + + ++ D+N Q
Sbjct: 1579 LTGGAGNDTLFGGEGSDTYIFNQGDGVDLIADSNTAGQ 1616
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + T+ +++ G +GND + G S N++ +GND G G DT+ Y
Sbjct: 1046 SIQGLGGDDTLYGGAGGDTLDGGAGNDTLYGQSGNDILIGGTGNDTLSGGGGNDTYVYNL 1105
Query: 312 PSYLYKIYR 320
I
Sbjct: 1106 GDGADTIID 1114
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 10/137 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-G 254
G G+ GN++ + GDD++ GG+ L + +
Sbjct: 668 GVLVGNDGNDV-----LNGGYYGNNILLGGAGDDVI----TGGMLATNILQGGAGDDVLK 718
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ +++ G GNDV+ G + +++ +GNDV G +G D + +
Sbjct: 719 GGWYNDTLQGGDGNDNLDGGWGNDVLDGGAGDDILNGDTGNDVLTGGTGNDILQGGSGND 778
Query: 315 LYKIYRFENAIIVYDAN 331
Y + + A I+ D +
Sbjct: 779 TYVYNKGDGADIIIDNS 795
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 245 LNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L+ S + I G + N + +++ G +GND + G N+V +GND G G
Sbjct: 1534 LSGGSINDILDGGDGNDWLDGGLGSDTLNGGAGNDQLSGGYGNDVLTGGAGNDTLFGGEG 1593
Query: 304 LDTFFYYAPSYLYKIYRFENAIIV 327
DT+ + + I A +
Sbjct: 1594 SDTYIFNQGDGVDLIADSNTAGQI 1617
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 13/133 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+ I E+ D+ IQT+ + G LD+ + G + L + +I
Sbjct: 989 GDTI---EIGAPDNLAIQTLQFADGS-TLDVNTLVGQQT---LTQVGTEGNDVLTGSDSI 1041
Query: 263 AQHTVI------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I +++ G +G D + G + N+ + SGND+ G +G DT + Y
Sbjct: 1042 MFRDSIQGLGGDDTLYGGAGGDTLDGGAGNDTLYGQSGNDILIGGTGNDTLSGGGGNDTY 1101
Query: 317 KIYRFENAIIVYD 329
+ A + D
Sbjct: 1102 VYNLGDGADTIID 1114
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 6/130 (4%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G +I + E Q + D G + + G + + L + S + G +
Sbjct: 1660 NDLLAGLSIQRFEFVDGTVMTAQQLVDLGIN------VDGTTGDDVLLGSSSTDYMFGDD 1713
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + +++ G GNDV+ G N++ G DV G +G DT+ + +
Sbjct: 1714 GNDVLLAGAGDDALDGGYGNDVLSGEGGNDILQGGIGYDVLYGGTGNDTYVFNYGDGQDR 1773
Query: 318 IYRFENAIIV 327
I + + +
Sbjct: 1774 IIDNQGSNTL 1783
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 20/151 (13%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------YEKNMT 261
+ ++D G D +++ + +L+ ++ G +N
Sbjct: 1152 DPADPTGSTGSIVFDLGNGDTINVGSGIQTSSNYNLSVQTVQFADGSSFTIDQMLRRNKF 1211
Query: 262 IAQHTVI------------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ T ++ G G+D + G N++ +GNDV G G DT+ Y
Sbjct: 1212 YVEGTATAESMTGFNHFYGNNLQGMGGDDTLTGTEGNDILSGGAGNDVLIGMGGSDTYIY 1271
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+I + + + LS
Sbjct: 1272 NFGDGADQIVDYPSGTQTASGWVAGTNTLSF 1302
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 15/171 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQT--------IYDSGGDDLLDL-TLIGGVKNYIDLNTESW 250
NNI ++ T + D G D + + + I L S
Sbjct: 797 YHTANNILQLGAGITADTLFVTYDSVAVTVLLDMGNGDSIHIGSPTDLAIQTIQLADGST 856
Query: 251 SSIGGYEKNMTIAQ----HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + ++ Q I S+ DV+ G + +++ +GNDV +G +G D
Sbjct: 857 LDVDTLLRQRSLVQNGTDGADILQGSDSAYADVLSGGAGDDILNGGAGNDVLNGGTGNDV 916
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
S Y + + + D+ D+ + + R AD + S
Sbjct: 917 LNGGTGSDTYVYNLGDGSDRITDSGRQYYDWQT--RQYRNADTNVLSFGAG 965
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 49/161 (30%), Gaps = 41/161 (25%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYID 244
Y G GN+ Y I D+ G + L G ID
Sbjct: 1751 YDVLYGGTGNDTYVFNYGDGQDR----IIDNQGSNTLQFGAGIFASDVTFSKFGSDLQID 1806
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIES----------------------VVGSSGNDVVIG 282
+S+ + + IE+ +VG+ +D++ G
Sbjct: 1807 -----FSNGTDRIRVVDWFAGNSIETLTFNDGTSLDLRAMEPSFADVPIVGTVADDILTG 1861
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ N+ GND G +G DT+ + + +IY
Sbjct: 1862 SVGNDTLAGGQGNDTLIGGTGNDTYLFNLGDGVDQIYELSG 1902
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 78/215 (36%), Gaps = 25/215 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIY-DSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G S G I V + + I D G D +++ G + + + ++
Sbjct: 1296 GTNTLSFGTGITADMVTPRYDRSVNAIVLDLGNGDSINV----GAADALTIQQLKFADGS 1351
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---NVFFESSGNDVFDGSSGLDTFFYYA 311
N + Q T+ E VG+SG+DV+ G++++ + +GND+ G G DT+ +
Sbjct: 1352 TMNLNDFLGQKTLTE--VGTSGSDVLYGSNSSSYSDTLIGGAGNDLLIGGRGNDTYVFNL 1409
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLR------FADQCIDSVNVKQRSILE 363
I + + + + F + + + + F D +D +I +
Sbjct: 1410 GDGADNIIDTGVSDMAHGLGINVLSFGAGITADMITVQLDGEFGDVTLDLGGGDSVTIGQ 1469
Query: 364 YTASYEDLIQV-------IGQDVFESMKHFYEFGL 391
+ DL + + F + GL
Sbjct: 1470 IDLNTNDLNGISIEQLKFADGSTITPFELFAQKGL 1504
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 29/163 (17%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------DLTLIGGVKNYIDLNTES 249
G LGN+ Y I + D + G++ + + TL ++ + +
Sbjct: 2358 SGGLGNDTYVIS-ESGDYTITDSCGVGSGNNTVEFAWNYADSNFTLSNESGLTLNFDNGA 2416
Query: 250 WSSIGGYEKN----------MTIAQHTVIE---------SVVGSSGNDVVIGNSANNVFF 290
+GG++ N A T + + GS+ ++V+ G + N+
Sbjct: 2417 TVRLGGFDPNDPQASCSIDSFKFADGTALTYDQLLTRGIDMQGSAASEVIEGTAVNDRID 2476
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND G G D Y + + D H
Sbjct: 2477 ALDGNDTIIGGKGNDILRGGEGGDTYAYDLGDGTDTIIDQGWH 2519
Score = 37.8 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 6/124 (4%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + + + VF+G +G D Y + ++ D
Sbjct: 2011 NDTINDPWRASTLDGIGTSAVFNGGAGNDIVIGGDQYDSYTFNLGDGQDVIADLGGWND- 2069
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + +D + + Y D I + + F S+G
Sbjct: 2070 -IRFGAGITASDITWNYDPASATPFVLNVGPYGDSIAIANGEQGI----IQNFVFSDGTA 2124
Query: 397 ITFD 400
ITFD
Sbjct: 2125 ITFD 2128
>gi|113477608|ref|YP_723669.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168656|gb|ABG53196.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 1287
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 67/193 (34%), Gaps = 28/193 (14%)
Query: 200 GSLGNNIYKIEVQQKD------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G+ GN+ + V P TI GG D + +GG +N
Sbjct: 1015 GNTGNDTIRSGVDNDSVTGGEGSDLIDGGPNNDTIISGGGADTV----LGGSENDSIFGE 1070
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ S+ G + N TI + + ++G G+D + G N+ GND G+SG D
Sbjct: 1071 DGDDSMVGDDGNDTIDGGSGQDIILGDIGDDSIQGGDDNDRINGGLGNDTITGNSGSDRL 1130
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ L+ Y+ + D + D + D +V + S
Sbjct: 1131 IGGGGNDLF----------FYEVADQGIDIILDFDSK--GDDKFLFTSVNFGGLNNDDFS 1178
Query: 368 YEDLIQVIGQDVF 380
D VI QD
Sbjct: 1179 NNDFSSVILQDEN 1191
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 60/168 (35%), Gaps = 18/168 (10%)
Query: 199 KGSLGNN-IYKIEVQQ--KDSPFIQTIYDSGGDDLLD--------------LTLIGGVKN 241
G G++ +Y + +++ G+D ++ L GG N
Sbjct: 407 SGDAGDDFVYGDKGDDAVTGGNGNDSVFGGEGNDNVNGDAGEDVLSGGLGVDRLFGGDGN 466
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
E G N +I + + + G+ ND + G N+ SGND G
Sbjct: 467 DTLFGEEDNDQAFGGSGNDSIFGGSGADLLSGNEDNDTINGGDGNDQVQGDSGNDSLGGG 526
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G DT + + I A+ V+DA + DF ++++ +
Sbjct: 527 LGTDTLIGGEGNDTFFISPENGALEVFDA-DVIADFNNNIDLISLGGG 573
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 57/176 (32%), Gaps = 6/176 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+I S G+D + + +L+GG + + SI G + +IA
Sbjct: 956 NDSVFGGSGNDSILGSQGNDSIFGEADNDSLVGGDGDDSIIGGAGDDSILGVDGQDSIAG 1015
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+T +++ ND V G +++ ND G DT + + +++
Sbjct: 1016 NTGNDTIRSGVDNDSVTGGEGSDLIDGGPNNDTIISGGGADTVLGGSENDSIFGEDGDDS 1075
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ D N D S + + + + + G D
Sbjct: 1076 MVGDDGN-DTIDGGSGQDIILGDIGDDSIQGGDDNDRINGGLGNDTITGNSGSDRL 1130
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 9/203 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND 278
I+ +GGDD + G + ++ ++ + I G N T+ + ++V G +D
Sbjct: 314 DVIFGAGGDDSI-----FGEASNDEIRGDADNDFINGGRGNDTVIGNPGNDNVRGGKDDD 368
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+V+G N++ F ND+ +G G DT F + + D +
Sbjct: 369 LVLGEDGNDLLFGDRENDIVNGGDGRDTIFGGKDDDNVS-GDAGDDFVYGDKGDDAVTGG 427
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + + + + +L + L G D + + G D
Sbjct: 428 NGNDSVFGGEGNDNVNGDAGEDVLSGGLGVDRLFGGDGNDTLFGEEDNDQAFGGSGNDSI 487
Query: 399 F--DSYLYLGSYDDLRNVFGSDR 419
F L +D + G D
Sbjct: 488 FGGSGADLLSGNEDNDTINGGDG 510
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 3/149 (2%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
LIG + + SI G N I + + G GND VIGN N+
Sbjct: 307 LIGSSQGDVIFGAGGDDSIFGEASNDEIRGDADNDFINGGRGNDTVIGNPGNDNVRGGKD 366
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D+ G G D F + + + + ++ + + + D+ D+V
Sbjct: 367 DDLVLGEDGNDLLFGDRENDI--VNGGDGRDTIFGGKDDDNVSGDAGDDFVYGDKGDDAV 424
Query: 355 NVKQRS-ILEYTASYEDLIQVIGQDVFES 382
+ + +++ G+DV
Sbjct: 425 TGGNGNDSVFGGEGNDNVNGDAGEDVLSG 453
>gi|261494687|ref|ZP_05991167.1| leukotoxin structural protein [Mannheimia haemolytica serotype A2
str. OVINE]
gi|73621158|sp|Q9EV29|LKA2D_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762040|gb|AAG40298.1|AF314514_1 leukotoxin [Mannheimia haemolytica]
gi|261309652|gb|EEY10875.1| leukotoxin structural protein [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 953
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---ILDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSN 812
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 7/135 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDILDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D + + +
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDLTFEKVKHN 824
Query: 334 KQDFLSDVERLRFAD 348
S E++ D
Sbjct: 825 LVITNSKKEKVTIQD 839
>gi|254471153|ref|ZP_05084555.1| 5'-nucleotidase [Pseudovibrio sp. JE062]
gi|211959299|gb|EEA94497.1| 5'-nucleotidase [Pseudovibrio sp. JE062]
Length = 1553
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 27/161 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + I ++ G+D + Y N I
Sbjct: 21 WDDVINGTDGIDWVWGFNGNDTI----------------------STYAGNDWIRAGKGN 58
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR----FENA 324
+ + GND + ++V +GND +G G DT Y Y + +
Sbjct: 59 DLIFAGDGNDRISAAGGDDVIHGGAGNDSINGGRGFDTAVYEGSIDDYSFQQRGRWWNPK 118
Query: 325 IIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEY 364
V + ++D L +VE + F AD ++ + I
Sbjct: 119 TKVIANDGSEKDTLMNVEAVYFQADDYTYYLDGRNNEIRAG 159
>gi|109108478|ref|XP_001098794.1| PREDICTED: collagenase 3 isoform 2 [Macaca mulatta]
Length = 489
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 64/187 (34%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|302875208|ref|YP_003843841.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578065|gb|ADL52077.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 914
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 5/162 (3%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D V +Q + A + N +K + +I + G + D +L ++
Sbjct: 569 DSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSIVYANGTEEKD-SLYAAGPVTMN-G 626
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ N I I++++ +GND + G N++ + G+D+ +G G DT
Sbjct: 627 YGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDT 686
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ A +Y + + + D ++ LRF D
Sbjct: 687 LYGEAGQDIYVFRKGDGQDTINDTAGENNTI---IDTLRFED 725
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 5/162 (3%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D V +Q + A + N +K + ++ + G + D +L ++
Sbjct: 183 DSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSVVYANGTEEKD-SLYAAGPVTMN-G 240
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ N I I++++ +GND + G N++ + G+D+ +G G DT
Sbjct: 241 YGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDT 300
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ A +Y + + + D ++ LRF D
Sbjct: 301 LYGEAGQDIYVFRKGDGQDTINDTAGENNTI---IDTLRFED 339
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 8/175 (4%)
Query: 184 MVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
MV DI A+ K Y + I + + I G+D L+ +
Sbjct: 1 MVLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKVYG 60
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + I G + T+ +++ GS+G D++ G S ++ G+D+ DG
Sbjct: 61 GNGDDT----IVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEK 116
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G DT A S Y + + I+ D + ++ L+F D V++
Sbjct: 117 GTDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTI---IDTLKFEDIDASEVSLN 168
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 68/186 (36%), Gaps = 8/186 (4%)
Query: 185 VSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
V DI A+ K Y + + + + I G+D L+ +
Sbjct: 388 VLDINAIMKGYVYINGTNSNEQLNGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKVYGG 447
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + I G + T+ +++ GS+G D++ G S ++ G+D+ DG G
Sbjct: 448 NGDDT----IVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKG 503
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT A S Y + + I+ D + ++ L+F D V++
Sbjct: 504 NDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTI---IDTLKFEDIAASEVSLNCTGYDL 560
Query: 364 YTASYE 369
A +
Sbjct: 561 IIAVND 566
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G++ N T+ + V G +G+D ++GN+ ++ +G D GS+G D +
Sbjct: 40 INGFDGNDTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSE 99
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
E + D E D L+ +D + Q I++Y+ +I
Sbjct: 100 DDT---LNGEIGDDILDG-EKGTDTLTGG---AGSDTYVFRKGDGQDIIVDYSGEANTII 152
Query: 373 QVIGQDVFES 382
+ + ++
Sbjct: 153 DTLKFEDIDA 162
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G++ N T+ + V G +G+D ++GN+ ++ +G D GS+G D +
Sbjct: 426 INGFDGNDTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSE 485
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
E + D E D L+ +D + Q I++Y+ +I
Sbjct: 486 DDT---LNGEIGDDILDG-EKGNDTLTGG---AGSDTYVFRKGDGQDIIVDYSGEANTII 538
Query: 373 QVIGQDVFES 382
+ + +
Sbjct: 539 DTLKFEDIAA 548
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G++ N T+ + V G +G+D ++GN+ ++ +G D GS+G D +
Sbjct: 812 INGFDGNDTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSE 871
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
E + D E D L+
Sbjct: 872 DDT---LNGEIGDDILDG-EKGTDTLTG 895
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Query: 185 VSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
V DI A+ K Y + I + + I G+D L+ +
Sbjct: 774 VLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKVYGG 833
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + I G + T+ +++ GS+G D++ G S ++ G+D+ DG G
Sbjct: 834 NGDDT----IVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKG 889
Query: 304 LDTFFYYAPSYLYKI 318
DT A S Y
Sbjct: 890 TDTLTGGAGSDTYVF 904
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 225 SGGDDLLDLTLIGGVKNY----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+G D + + Y I + I ++ A T + + ++G +
Sbjct: 179 NGTTDSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSVVYANGTEEKDSLYAAGPVTM 238
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G ++ + ND G +G+DT A +
Sbjct: 239 NGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDS 273
>gi|262402313|ref|ZP_06078874.1| rTX toxin putative [Vibrio sp. RC586]
gi|262351095|gb|EEZ00228.1| rTX toxin putative [Vibrio sp. RC586]
Length = 2338
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 46/237 (19%)
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H G N Y D+ + + S +S S + M +D++
Sbjct: 2095 HSGDSN----DYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDH--- 2147
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + VQ + P T+ G+D + G
Sbjct: 2148 --------DGVLLQSVQSQIQPITDTVNLGSGNDT----------------------VYG 2177
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ ++++G GND + G + N+ GNDV G SG D S +
Sbjct: 2178 GGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLSGGRGNDVLRGDSGNDVLVGGLGSDI 2237
Query: 316 YKIYRFEN-----AIIVYDANEHKQDFLSDVERL----RFADQCIDSVNVKQRSILE 363
E+ + ++ + DF +++ F+D+ + ++E
Sbjct: 2238 LTGGSGEDLFKWVDGDLDNSKDRITDFTIGQDKIDLSDLFSDETRTLDQLLNSHVIE 2294
>gi|311105413|ref|YP_003978266.1| hemolysin-type calcium-binding repeat family protein 3 [Achromobacter
xylosoxidans A8]
gi|310760102|gb|ADP15551.1| hemolysin-type calcium-binding repeat family protein 3 [Achromobacter
xylosoxidans A8]
Length = 2061
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I +++ G GND++ G + N+ + +GNDV G G DT A
Sbjct: 1883 LHGGNGNDIIYGQGGNDTLYGDDGNDILYGGTGNDTLYGGNGNDVLIGGKGNDTLVGGAG 1942
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
S +K + + A + +DF
Sbjct: 1943 SDTFKWELNDQGTVGAPAVDTIKDF 1967
>gi|300312186|ref|YP_003776278.1| calcium binding secreted hemolysin protein [Herbaspirillum
seropedicae SmR1]
gi|300074971|gb|ADJ64370.1| calcium binding secreted hemolysin protein [Herbaspirillum
seropedicae SmR1]
Length = 1080
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 61/182 (33%), Gaps = 15/182 (8%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + T +S+ G G D + G N+V G D G G DT+ S
Sbjct: 539 GTAGDDQLLGSTGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGDDTYIV--NSS 596
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRF--------ADQCIDSV--NVKQRSILEY 364
++ N ++VE LR A +D++ Q +IL+
Sbjct: 597 DDRVVETINGGHDTVIASCSTILAANVEDLRLVEGGNLNGAGNTLDNLIVGNGQDNILDG 656
Query: 365 TASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ +I +G D + EG D + + ++ N+ D G
Sbjct: 657 GVGADTMIGGLGNDSYFVDDAGDQVTEAADEGVDTVYSRISMRLA-ANVENLTLLDGGTP 715
Query: 423 AR 424
R
Sbjct: 716 LR 717
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 67/217 (30%), Gaps = 34/217 (15%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
D FG+ ++ + +YG G++ Y + D ++TI +GG D +
Sbjct: 560 GKDWLFGFDGNDVLDGGLGADTLYGGD----GDDTYIVN--SSDDRVVETI--NGGHDTV 611
Query: 232 DLTLIG-GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ N DL ++ G +++++ +G D N+
Sbjct: 612 IASCSTILAANVEDLRLVEGGNLNG--------AGNTLDNLIVGNGQD--------NILD 655
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
G D G G D++F E VY ++VE L D
Sbjct: 656 GGVGADTMIGGLGNDSYFVDDAGDQVTEAADEGVDTVYSRIS--MRLAANVENLTLLDGG 713
Query: 351 IDSVNVKQ-------RSILEYTASYEDLIQVIGQDVF 380
+ + Y Y+ V G D
Sbjct: 714 TPLRGTVEGKAALIYGAPKAYDLDYQQGNGVTGYDGT 750
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN +N + G+++ G+ G DT A + Y + + +V D + +
Sbjct: 922 TGNELDNHLVGNRGDNLITGAKGNDTLVGQAGNDTYVFGKGDGRDLVADHDA----TAGN 977
Query: 341 VERLRFADQCIDSVNVKQRS 360
++ ++F+D ++ +Q
Sbjct: 978 IDTIKFSDARQTNLWFRQVG 997
>gi|195056285|ref|XP_001995042.1| GH22855 [Drosophila grimshawi]
gi|193899248|gb|EDV98114.1| GH22855 [Drosophila grimshawi]
Length = 764
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 78/209 (37%), Gaps = 45/209 (21%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
++ +++ DH R + + ++ LT + + ++ + ++R AL W
Sbjct: 169 NFSPDKLRDHGTRQRRYVLQGAKWSKTDLTWSFANLSMPDVGKIRKLISR-ALLVWENHS 227
Query: 67 DLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRY 112
LTF E S +DI+ + + ++D + + +FD + W +
Sbjct: 228 KLTFREVYSSQADIQVMFVRGDHGDGYKFDGPGLVLAHAFYPGVGRGGDAHFDADENWDF 287
Query: 113 GIGK----GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+ GT + ALHE+GH+LGL H N VM P
Sbjct: 288 DVNSSNSEGTNFLNVALHELGHSLGLGHSSDENA-------------------VM---FP 325
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+D + D +Q++YGA
Sbjct: 326 WYQNIDVNGKLP----DDDRNGIQELYGA 350
>gi|76825185|gb|AAI06861.1| Mmp21 protein [Mus musculus]
Length = 415
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 78/211 (36%), Gaps = 48/211 (22%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDI------TELN-PNAQEVARWALGEWSKVVDLTFEE 72
D + + L++ + ++L+ + + R A WS+V L F E
Sbjct: 155 DGQQEDASDTGASRAFSKKTLTWRLVGDAYSSQLSGDEQRYIFRLAFRMWSEVTPLDFRE 214
Query: 73 --TSIHS--DIKFISSNNGYVCTPRYDSRY---------FMEINFDKADVWRY-GIGKGT 118
T+ + DIK ++ PR EI+FD + + G
Sbjct: 215 DRTAPGTMVDIKLGFGRGRHLGCPRVFDGSGQEFAHAWRLGEIHFDDDEHFTPLSSDTGI 274
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HEIGH LGL P +Y G S+M P + +F
Sbjct: 275 SLLKVAVHEIGHVLGL--PHTYRVG-----------------SIM---QPNYIPQEPAFE 312
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+D A+Q++YG+ KGS + ++
Sbjct: 313 ----LDWADRKAIQRLYGSCKGSF-DTVFDW 338
>gi|47228071|emb|CAF97700.1| unnamed protein product [Tetraodon nigroviridis]
Length = 549
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 48/157 (30%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------T 73
W I + T ++ E R A W V L F E
Sbjct: 85 WDKNEITFSIQNYTPKVGEYETYE-------AIRKAFKVWESVTPLRFREIPYSYIRDKV 137
Query: 74 SIHSDIKFISSNN-----------GYVCTPRYDSRYFM--EINFDKADVWR--YGIGKGT 118
+DI S G Y + + +FD A+ W G
Sbjct: 138 EEFADIMIFFSEGFHGDSSPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTVKNRDLLGN 197
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H ++ + + EN
Sbjct: 198 DIFLVAVHELGHALGLEHSNDHSAIMAPFYQWMETEN 234
>gi|297690060|ref|XP_002822445.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-27-like
[Pongo abelii]
Length = 512
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 60/189 (31%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + YK T E + L WSKV L F + S +DI
Sbjct: 105 WRKYNLTYKIINYTPDMAR-------AAVDEAIQEGLEVWSKVTPLKFTKISKGIADIMI 157
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 158 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 216
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D Y + D
Sbjct: 217 FGHALGLSHSND-------------------QTALM---FPNYVSLDPRK-YPLS--QDD 251
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 252 ISGIQSIYG 260
>gi|296480370|gb|DAA22485.1| collagenase 3 precursor [Bos taurus]
Length = 471
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 65/187 (34%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F + +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDLTHSEV-------EKAFRKAFKVWSDVTPLNFTRIHNGTA 161
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D D +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGD--EDPYSKHP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|163746969|ref|ZP_02154326.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Oceanibulbus
indolifex HEL-45]
gi|161380083|gb|EDQ04495.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Oceanibulbus
indolifex HEL-45]
Length = 354
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 5/135 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI--YRFENAII 326
+ + G GND ++G ++ +G+D +G G D + + + I + + +
Sbjct: 69 DHIDGRYGNDTLLGAGGDDNLEGGAGDDFLNGGLGEDAAIFLGNASSFTIRFSKTGDVTV 128
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL---EYTASYEDLIQVIGQDVFESM 383
D L+ +E++ F+D+ D + L E+ E + +
Sbjct: 129 SDRVGAEGVDTLTGIEQIVFSDRTFDLGQFASLAALSEAEFITLTEIYVAYFNRAADAEG 188
Query: 384 KHFYEFGLSEGRDIT 398
+F+ L+EG D++
Sbjct: 189 LYFWADKLAEGMDVS 203
>gi|115927475|ref|XP_788224.2| PREDICTED: similar to matrix metalloproteinase 1
[Strongylocentrotus purpuratus]
Length = 486
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 62/200 (31%), Gaps = 54/200 (27%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSD 78
W+ + Y T D++ L + R A W+ V L+F E+S +D
Sbjct: 53 GGRWTKNNLTYHIKSFTP-----DLSRLQT--RNAIRRAFQLWANVSPLSFNESSNATAD 105
Query: 79 IKFIS------------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
I GY+ Y + +FD+ + + G L
Sbjct: 106 IVIDFVTRYEHNDAYPMELKQFDGPGGYLAHASYPPHGIV--HFDEDETYTVMTLDGVDL 163
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
+ A HE GH LGL H + + VMS P + F
Sbjct: 164 AIVAAHEFGHVLGLGHSSNSHA-------------------VMS---PIYNGFVEDFNLH 201
Query: 181 ATPMVSDIVAVQKIYGAPKG 200
DI +Q +YG
Sbjct: 202 Q----DDIDGIQYLYGKTVS 217
>gi|50950195|ref|NP_001002967.1| stromelysin-1 precursor [Canis lupus familiaris]
gi|62900543|sp|Q6Y4Q5|MMP3_CANFA RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; Flags: Precursor
gi|34391862|gb|AAO63580.1| stromelysin 1 [Canis lupus familiaris]
Length = 478
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 61/200 (30%), Gaps = 52/200 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T AL W +V LTF T +DIK
Sbjct: 109 WRKTHLTYRIMNYTPDLPR-------DAVDSAIEKALNVWKEVTPLTFSRTDEGEADIKI 161
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ G+ P + + +FD + W GT L A H
Sbjct: 162 SFAVRDHGDFNPFDGPGNVLGHAYPP--GPGIYGDAHFDDDEQWTSDT-SGTNLFLVAAH 218
Query: 127 EIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E+GH+LGL H + YPVY V D F
Sbjct: 219 ELGHSLGLFHSADPSALMYPVYNVLADLAR---------------------FHLSQ---- 253
Query: 186 SDIVAVQKIYGAPKGSLGNN 205
D+ +Q +YG P N+
Sbjct: 254 DDVNGIQSLYGGPPSDSSND 273
>gi|261251723|ref|ZP_05944297.1| Ca2+-binding protein [Vibrio orientalis CIP 102891]
gi|260938596|gb|EEX94584.1| Ca2+-binding protein [Vibrio orientalis CIP 102891]
Length = 4215
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 5/122 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-----IG 254
+ G++ ++ + TI D + V N DL S +
Sbjct: 3987 ATEGDHTLQVTAVSHELAQDGTILDQAESSNHIAINLNVVNNIADLVINHASDTEAVRLD 4046
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ + + +VG GND +IG + ++ G+DV G G D
Sbjct: 4047 GSGSNSTLTGGSGNDLLVGGDGNDTLIGGAGDDYLEGGDGDDVLYGGLGSDILVGGTGMD 4106
Query: 315 LY 316
+
Sbjct: 4107 TF 4108
>gi|259415257|ref|ZP_05739179.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
gi|259349167|gb|EEW60921.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
Length = 1043
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 26/212 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
GA +L N+ + + +I + G+D L D G +++D + +
Sbjct: 442 GAGNDTLHNSAGDDSLVGGEGD--DSIVATEGNDTLEGGEGNDTLYAGVDDDHLDGGSGN 499
Query: 250 WSSIG-----------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
S G G N TI +++ G G+D++ G N+
Sbjct: 500 DSMFGEAGHDVMYGRSGADHMEGGSGNDTIDGGADDDTISGGDGDDLIYGGLGNDSLTTG 559
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
SGND G G DT +++I+ D N D S + + +
Sbjct: 560 SGNDTLYGGEGNDTLRNSVGDDSLVGGSGDDSIVATDGN-DTLDGGSGNDIMYGGNDSDL 618
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ +++ A + +
Sbjct: 619 LIGGAGDDVMQGEADADTFRIEDNFGNDKIFG 650
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 13/181 (7%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ G+D L D +L+GG + + TE ++ G E N T+ + +
Sbjct: 435 GNDTLLGGAGNDTLHNSAGDDSLVGGEGDDSIVATEGNDTLEGGEGNDTLYAGVDDDHLD 494
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G SGND + G + ++V + SG D +G SG DT A ++ I N+
Sbjct: 495 GGSGNDSMFGEAGHDVMYGRSGADHMEGGSGNDTIDGGADDDTISGGDGDDLIYGGLGND 554
Query: 333 -----HKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L E LR + V + T + L G D+
Sbjct: 555 SLTTGSGNDTLYGGEGNDTLRNSVGDDSLVGGSGDDSIVATDGNDTLDGGSGNDIMYGGN 614
Query: 385 H 385
Sbjct: 615 D 615
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 73/218 (33%), Gaps = 32/218 (14%)
Query: 199 KGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
+G GN+ + IY G+D L + TL GG N N+
Sbjct: 521 EGGSGNDTIDGGADDDTISGGDGDDLIYGGLGNDSLTTGSGNDTLYGGEGNDTLRNSVGD 580
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+ G + +I +++ G SGND++ G + +++ +G+DV G + DTF
Sbjct: 581 DSLVGGSGDDSIVATDGNDTLDGGSGNDIMYGGNDSDLLIGGAGDDVMQGEADADTFRIE 640
Query: 311 APSYLYKIYRFENA--------------------IIVYDANEHKQDFLSD--VERLRFAD 348
KI+ E D + +E L D
Sbjct: 641 DNFGNDKIFGGEAGKDHDVIDLSYMTGPVTVTYTGYESGTITDGTDTIRFSEIEELILTD 700
Query: 349 Q--CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ +D+ + A + LI G D F
Sbjct: 701 EDDVVDAREDSAGVQINAGAGNDTLIGGSGDDRFTGGA 738
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 10/173 (5%)
Query: 220 QTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I GG+DLLD ++ GG + I L + G TI+ + + G
Sbjct: 365 DVIMGQGGNDLLDGGEGDDSIDGGEGDDILLGGAGADVLMGGIGGDTISGGDGDDLIDGG 424
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + N+ +GND S+G D+ + + E
Sbjct: 425 EGDDSLSTGLGNDTLLGGAGNDTLHNSAGDDSLVGGEGDDSIVATEGND---TLEGGEGN 481
Query: 335 QDFLSDVERLRFADQCIDSVNVKQR--SILEYTASYEDLIQVIGQDVFESMKH 385
+ V+ + + ++ + + + G D +
Sbjct: 482 DTLYAGVDDDHLDGGSGNDSMFGEAGHDVMYGRSGADHMEGGSGNDTIDGGAD 534
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 42/141 (29%), Gaps = 18/141 (12%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + + GS +D + G + + GND DG +G DT
Sbjct: 102 LFKLLFGSDADDRLTGTADADAVMAGRGNDSVDGGAGNDTLMGDDDGE------------ 149
Query: 327 VYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + ++ L ++ + + + + + +
Sbjct: 150 ---SGSKATPLVLNINNLVSQTYSSGSAQAGDAAVYRDVAFLEDGTSVWGRVVLVGASDE 206
Query: 384 KHFYEFGLSEGRDITFDSYLY 404
F + G +IT D Y Y
Sbjct: 207 NMFIDLSGDRGAEITIDGYGY 227
>gi|113477607|ref|YP_723668.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168655|gb|ABG53195.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 982
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 9/128 (7%)
Query: 220 QTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T++ GDD LD +L+G N + L E ++ G + T+ T +S+ G
Sbjct: 678 DTLFGGIGDDTLDGGADNDSLLGQGGNDLLLGAEQQDTLEGGLGDDTLDGGTDNDSLSGG 737
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
ND ++GN N+ SGND +G + D+ F +
Sbjct: 738 DDNDSLLGNLGNDTLRGDSGNDTINGGADSDSILGGIGDDSL----FGGSGSDTLDGNEG 793
Query: 335 QDFLSDVE 342
DFLS E
Sbjct: 794 NDFLSGTE 801
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 18/158 (11%)
Query: 227 GDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
GDD LD +L GG N L ++ G N TI +S++G G+D +
Sbjct: 721 GDDTLDGGTDNDSLSGGDDNDSLLGNLGNDTLRGDSGNDTINGGADSDSILGGIGDDSLF 780
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--------IYRFENAIIVYDANEH 333
G S ++ + GND G+ G D+ + ++
Sbjct: 781 GGSGSDTLDGNEGNDFLSGTEGNDSINGSLGDDILNGGFGSDRLTGNQGADSFFFEVPNE 840
Query: 334 KQDFLSD-----VERLRFADQCIDSVNVKQRSILEYTA 366
D ++D V+ F + ++ + E+ +
Sbjct: 841 GVDVITDFNGDNVDAFLFRSKNFGNLTNPPGTATEFFS 878
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 228 DDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D + D ++ GG N + + G N + +++VG G+D ++G
Sbjct: 108 NDTILGNEGDDSIFGGKDNDSIIGGGEDDLLFGDRGNDVVNGDIGNDTIVGGVGDDRLLG 167
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
N + F +G D+ +G++G D F + + + + + +D L+
Sbjct: 168 NDGGDTLFGETGRDILEGNAGDDVLFGGKDADSLE----GGVGADFLSGDIGKDTLTG 221
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 69/207 (33%), Gaps = 8/207 (3%)
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTL---- 235
TP+ I+ + S + ++ ++ Y +G G+D LD L
Sbjct: 24 TPLSDSIIGSSRSDLIRALSGDDTVFALDENDSLLGGEGQDYMNGNAGNDFLDGGLGNDC 83
Query: 236 -IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
GG I L + G +N TI + +S+ G ND +IG +++ F G
Sbjct: 84 LRGGKGLDIFLGNSGSDILFGDRENDTILGNEGDDSIFGGKDNDSIIGGGEDDLLFGDRG 143
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
NDV +G G DT + + + + + + L
Sbjct: 144 NDVVNGDIGNDTIVGGVGDDRL-LGNDGGDTLFGETGRDILEGNAGDDVLFGGKDADSLE 202
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFE 381
L + L IGQD F
Sbjct: 203 GGVGADFLSGDIGKDTLTGGIGQDTFN 229
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 56/200 (28%), Gaps = 32/200 (16%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ T+ GDD+LD GG I L G N ++ +++ G
Sbjct: 637 GNSGNDTLSGGNGDDILD----GGAGEDILL---------GEAGNDSLFGGEETDTLFGG 683
Query: 275 SGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYYAPSYLYK-------- 317
G+D + G + N+ GN D +G G DT +
Sbjct: 684 IGDDTLDGGADNDSLLGQGGNDLLLGAEQQDTLEGGLGDDTLDGGTDNDSLSGGDDNDSL 743
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ N + D+ + +D + + L+ + L G
Sbjct: 744 LGNLGNDTLRGDSGNDTINGGADSDSILGGIGDDSLFGGSGSDTLDGNEGNDFLSGTEGN 803
Query: 378 DVFESM--KHFYEFGLSEGR 395
D G R
Sbjct: 804 DSINGSLGDDILNGGFGSDR 823
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 1/109 (0%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D +IGNS N+ +G+D+ DG +G D A + E + + D
Sbjct: 632 SDYLIGNSGNDTLSGGNGDDILDGGAGEDILLGEAGNDSL-FGGEETDTLFGGIGDDTLD 690
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+D + L + +Q+ LE + L D
Sbjct: 691 GGADNDSLLGQGGNDLLLGAEQQDTLEGGLGDDTLDGGTDNDSLSGGDD 739
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 11/123 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTVIESVVGSSGND 278
GG+D L G D+ ++ + G + T+ T + + G++G+D
Sbjct: 131 GGGEDDLLFGDRGNDVVNGDIGNDTIVGGVGDDRLLGNDGGDTLFGETGRDILEGNAGDD 190
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G + G D G G DT + + + DF+
Sbjct: 191 VLFGGKDADSLEGGVGADFLSGDIGKDTLTGGIGQDTFNLEPNSES-----PGVSGADFI 245
Query: 339 SDV 341
SD
Sbjct: 246 SDF 248
>gi|170739968|ref|YP_001768623.1| metallophosphoesterase [Methylobacterium sp. 4-46]
gi|168194242|gb|ACA16189.1| metallophosphoesterase [Methylobacterium sp. 4-46]
Length = 2105
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 7/154 (4%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESV 271
+++ G D L D L+GG + + L + G N + + +
Sbjct: 1935 GNDSLFGGAGADWLEGQAGDDALVGGEGDDV-LRGGEGNDWLDGEAGNDVLVGGAGNDGL 1993
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G G D ++G + ++ +G+DV G +G DT Y + + F D
Sbjct: 1994 RGGDGADWLVGEAGSDTLSGGAGDDVLFGGAGSDTIQYASGDGRDVVRDFVTGGAERDVV 2053
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
++ A Q + + V S
Sbjct: 2054 AFGPGLFGSFAAVQAATQQVGADVVITASAGNTL 2087
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 13/163 (7%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ G D +L GG N + + G E N ++ + + G +G+D
Sbjct: 1901 DALVGGEGTD----SLFGGDGNDWLVGEGGDDLLIGGEGNDSLFGGAGADWLEGQAGDDA 1956
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G ++V GND DG +G D A + + + ++ E D LS
Sbjct: 1957 LVGGEGDDVLRGGEGNDWLDGEAGNDVLVGGAGNDGLRGGDGADWLV----GEAGSDTLS 2012
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A + +I + D+++ E
Sbjct: 2013 GG-----AGDDVLFGGAGSDTIQYASGDGRDVVRDFVTGGAER 2050
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 68/197 (34%), Gaps = 16/197 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVG 273
+++ G+D L G L S + G + +A +++VG
Sbjct: 1851 GGDGSDSLFGGAGNDWL-----VGEAGDDALVAGEGSDSLFGGDGADWLAGEAGDDALVG 1905
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE- 332
G D + G N+ G+D+ G G D+ F A + + ++A++ + ++
Sbjct: 1906 GEGTDSLFGGDGNDWLVGEGGDDLLIGGEGNDSLFGGAGADWLEGQAGDDALVGGEGDDV 1965
Query: 333 ----HKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESM 383
D+L + + L L A + L G DV +
Sbjct: 1966 LRGGEGNDWLDGEAGNDVLVGGAGNDGLRGGDGADWLVGEAGSDTLSGGAGDDVLFGGAG 2025
Query: 384 KHFYEFGLSEGRDITFD 400
++ +GRD+ D
Sbjct: 2026 SDTIQYASGDGRDVVRD 2042
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 52/163 (31%), Gaps = 13/163 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+Y G D LD G + + N + W + G + + +S+ G +GND +
Sbjct: 1813 LYGGAGADTLDG---GDGADTLFGNEGADW--MAGQAGDDALVGGDGSDSLFGGAGNDWL 1867
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G + ++ G+D G G D A D+L
Sbjct: 1868 VGEAGDDALVAGEGSDSLFGGDGADWLAGEAGDDALV----GGEGTDSLFGGDGNDWLVG 1923
Query: 341 V---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ L + LE A + L+ G DV
Sbjct: 1924 EGGDDLLIGGEGNDSLFGGAGADWLEGQAGDDALVGGEGDDVL 1966
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 58/223 (26%), Gaps = 38/223 (17%)
Query: 212 QQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQH 265
+ F + GG D G L + + G +I
Sbjct: 1694 DTEKGTFALYNWHGGGGVTYDNVRAVALGTGEAPVGKTLVGGAGDDALTGGAGADSIMGG 1753
Query: 266 TVIESVVGSSGNDVVIGNSANNVFF------------------ESSGNDVFDGSSGLDTF 307
+++ G +GNDV+ G ++ + G D G +G D
Sbjct: 1754 GGNDTLSGLAGNDVLAGEQGDDQLIGGDGDDSLDGGDGADLLCGNDGADGLWGGAGKDQL 1813
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A + + + + + D + L D L A
Sbjct: 1814 YGGAGADTLDGGDGADTLFGNEGADWMAGQAGD-DALVGGDGSDSLFGGAGNDWLVGEAG 1872
Query: 368 YEDLIQVIGQDV-----------FESMKHFYEFGLSEGRDITF 399
+ L+ G D E+ G EG D F
Sbjct: 1873 DDALVAGEGSDSLFGGDGADWLAGEAGDDALVGG--EGTDSLF 1913
>gi|17228286|ref|NP_484834.1| outer membrane secretion protein [Nostoc sp. PCC 7120]
gi|17130136|dbj|BAB72748.1| outer membrane secretion protein [Nostoc sp. PCC 7120]
Length = 993
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 5/170 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D LD + G + + + G N + + + G +GND + G+ N
Sbjct: 793 GND-LDNRITGNNADNVLFGEAGNDILNGGAGNDELFGSDGNDILNGGAGNDELFGSDGN 851
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLR 345
++ +GND G +G D + + N D + DF V+ ++
Sbjct: 852 DILNGGAGNDELFGGAGNDILNGGTGADSFSFGNPGNPFNNSDFGIDTVADFAVGVDDIK 911
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
++ + + + + + + L GR
Sbjct: 912 LDKVSFSALTSVVGNGFSVGGEFASVSNDTLAAISNGL---IVYSLGSGR 958
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + + + I + + + +Y + +D+++ +Y+ + ++
Sbjct: 521 FSSNTLTASITVSPINNPIQGTTGLDKLYGTANEDIING---NEGNDYLFGRAGND-TLD 576
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N + T +++ G G+D++ GN N++ GND DG +G D +
Sbjct: 577 GGEGNDYLFGGTGNDTLDGGEGSDLLYGNEDNDIINGGVGNDNLDGGTGDDILRGGTGND 636
Query: 315 LYKIYRFENAIIVYDANEHKQDFL 338
+Y + + ++ + D +
Sbjct: 637 IYTVDTVGD--VIEENPNEGTDKV 658
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 2/143 (1%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+IY ++ + + TL ++N L G N
Sbjct: 631 GGTGNDIYTVDTVGDVIEENPNEGTDKVNSYISWTLGANLENLTLLGNTIIDGTGNELDN 690
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + V G GND +IG N++ +GND +G +G DT + +Y+I
Sbjct: 691 HIIGNNAVNRLE-GGDGNDWLIGKDGNDILIGGNGNDRLNGETGEDTLEGGLGNDVYEID 749
Query: 320 RFENAIIVYDANEHKQDFLSDVE 342
+ +I+ A+ +S V+
Sbjct: 750 SVGD-VIIEAADAGIDTVISSVD 771
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 15/185 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ G+D+ ++ +G V + + + I ++ +E
Sbjct: 725 NDRLNGETGEDTLEGGLGNDVYEIDSVGDV-----IIEAADAGIDTVISSVDWTLGVNLE 779
Query: 270 S-------VVGSSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ GND+ + GN+A+NV F +GND+ +G +G D F + +
Sbjct: 780 NLTLVGNQATLGIGNDLDNRITGNNADNVLFGEAGNDILNGGAGNDELFGSDGNDILNGG 839
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + D N+ + E A I + S G D
Sbjct: 840 AGNDELFGSDGNDILNGGAGNDELFGGAGNDILNGGTGADSFSFGNPGNPFNNSDFGIDT 899
Query: 380 FESMK 384
Sbjct: 900 VADFA 904
>gi|307592179|ref|YP_003899770.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985824|gb|ADN17704.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 834
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 19/195 (9%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y + + FG DIV+ GN +Y + +
Sbjct: 586 YNSDGEQLWVQQFGTPQADFAYDIVSD-----------GNFVYITGFTEGSTSIANV--- 631
Query: 225 SGGDDLLDLTLIGGVKNYIDLNT--ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G D + ++ N+ + +S+ N I ++++G+ D + G
Sbjct: 632 -GATDTIIAKFDANTGELLNFNSSVAAANSLPSNSFN-EILGTANADNLIGTDNADKITG 689
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ G+D+ +G +G DT + + N+ DF + ++
Sbjct: 690 LDGNDTLKGQDGDDILNGGNGNDTLTGGNGLDQFIFASGKTFKAQEMGNDKITDF-TGID 748
Query: 343 RLRFADQCIDSVNVK 357
++ + Q +++
Sbjct: 749 QIILSKQTFTALSSS 763
>gi|302875209|ref|YP_003843842.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578066|gb|ADL52078.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 143
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ N I I++++ +GND + G N++ + G+D+ +G G DT
Sbjct: 5 GGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDTL 64
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ A +Y + + + D ++ LRF D
Sbjct: 65 YGEAGQDIYVFRKGDGQDTINDTAGENNTI---IDTLRFED 102
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L TE+ + I G TI +S+ G GND++ G +++ GND G +G
Sbjct: 10 LRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDTLYGEAG 69
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
D + + I N D L +
Sbjct: 70 QDIYVFRKGDGQDTINDTAGE------NNTIIDTLRFEDI 103
>gi|300865489|ref|ZP_07110280.1| hypothetical protein OSCI_1900008 [Oscillatoria sp. PCC 6506]
gi|300336509|emb|CBN55430.1| hypothetical protein OSCI_1900008 [Oscillatoria sp. PCC 6506]
Length = 1497
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 54/161 (33%), Gaps = 13/161 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ +I G+D +G + L S+ G N
Sbjct: 315 GGTGNDACD------GGTGSDSIVGGDGNDT----CLGDDGDDTILGGGGDDSLNGGAGN 364
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI- 318
IA S+ G +G+D + G +N GND G +G T A + ++ I
Sbjct: 365 DAIAAGQGNNSLEGGAGDDSLEGGDGDNSLSGGEGNDTLTGGTGNHTCVGGAGNDVFIIK 424
Query: 319 -YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ D ++ FL + F+ I V V
Sbjct: 425 NVTSGGKSTIADYTDNSDKFLLAGD-FSFSSLSIVQVGVNT 464
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 60/194 (30%), Gaps = 18/194 (9%)
Query: 199 KGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESW 250
G GN+ +I G D + GG N +
Sbjct: 197 SGDRGNDTCSGGAGNDSISGGGGNDSIVGEQGSDTCIGGDGNDVADGGDDNDSIVGGGGD 256
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + N + + +S+ G +G+D ++G N+V +G+D G SG DT
Sbjct: 257 DTLMGGDGNDACSGNEGDDSISGDAGDDSLLGGDGNDVCEGGAGDDSLVGDSGKDTLVGG 316
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++I+ D N + D + L A +
Sbjct: 317 TGNDACDGGTGSDSIVGGDGN----------DTCLGDDGDDTILGGGGDDSLNGGAGNDA 366
Query: 371 LIQVIGQDVFESMK 384
+ G + E
Sbjct: 367 IAAGQGNNSLEGGA 380
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N ++ +++ G G+D + G + ++ GND G G D
Sbjct: 1326 FTGNASNNSVLGTAFNDTIFGGEGDDSMSGGNGSDSLSGGIGNDTLIGGFGTDALDGGVG 1385
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ ++ + A + N D L ++ + F+
Sbjct: 1386 NDVFVFNGTDAAGSDFITNYGTADDLIRLDSVGFSG 1421
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 40/117 (34%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + +I ++ +G G+D ++G ++ +GND G ++ A
Sbjct: 323 DGGTGSDSIVGGDGNDTCLGDDGDDTILGGGGDDSLNGGAGNDAIAAGQGNNSLEGGAGD 382
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +N++ + N+ + + A + + A Y D
Sbjct: 383 DSLEGGDGDNSLSGGEGNDTLTGGTGNHTCVGGAGNDVFIIKNVTSGGKSTIADYTD 439
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 1/131 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N T + +S+ G GND ++G ++ GNDV DG D+
Sbjct: 195 TISGDRGNDTCSGGAGNDSISGGGGNDSIVGEQGSDTCIGGDGNDVADGGDDNDSIVGGG 254
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+A + ++ D + L D L + + L
Sbjct: 255 GDDTLMGGDGNDACSGNEGDDSISGDAGD-DSLLGGDGNDVCEGGAGDDSLVGDSGKDTL 313
Query: 372 IQVIGQDVFES 382
+ G D +
Sbjct: 314 VGGTGNDACDG 324
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 55/185 (29%), Gaps = 15/185 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGG-------- 255
+I GGDD L D + I + S +GG
Sbjct: 238 NDVADGGDDNDSIVGGGGDDTLMGGDGNDACSGNEGDDSISGDAGDDSLLGGDGNDVCEG 297
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ ++ + +++VG +GND G + ++ GND G G DT
Sbjct: 298 GAGDDSLVGDSGKDTLVGGTGNDACDGGTGSDSIVGGDGNDTCLGDDGDDTILGGGGDDS 357
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+AI N + D + L D + L +
Sbjct: 358 LNGGAGNDAIAAGQGNNSLEGGAGD-DSLEGGDGDNSLSGGEGNDTLTGGTGNHTCVGGA 416
Query: 376 GQDVF 380
G DVF
Sbjct: 417 GNDVF 421
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 1/123 (0%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + G GND + G+ N+ +GND G G D+ S
Sbjct: 178 LYGGKGNDICDGDDGNDTISGDRGNDTCSGGAGNDSISGGGGNDSIVGEQGSDTCIGGDG 237
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D N+ D + L D + + A + L+ G DV E
Sbjct: 238 NDVADGGDDNDSIVGGGGD-DTLMGGDGNDACSGNEGDDSISGDAGDDSLLGGDGNDVCE 296
Query: 382 SMK 384
Sbjct: 297 GGA 299
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 21/171 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G LG + + T +++LT G +L+ + G
Sbjct: 1049 GTGVTGLGTADFLFNGTVPTPTVVST------TSIVNLTAAGNTYPTGNLDFSNNVGGYG 1102
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + +V G++ D + G + F G D+ G G D F Y P+
Sbjct: 1103 FTGPLLFIGDANANNVTGTAFADFMTGAGGADFFTGGLGGDILTGGEGADIFGYKLPTE- 1161
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ DF++ V++ +F ++ + +
Sbjct: 1162 --------------GGDTITDFIAGVDKFQFVGAAFGNLTTANFDAVSGVS 1198
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + ++ +G GNDV G+ ++V + G+D G G DT F
Sbjct: 87 TLQGGTGGNVLYGGKDNDTCIGGEGNDVASGDDGDDVAMGNGGDDRVTGDLGDDTAFGGK 146
Query: 312 PSYLYKIYRFENAI 325
+ + +
Sbjct: 147 GKDRCEGGDGTDWV 160
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 37/97 (38%), Gaps = 6/97 (6%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND ++G+ A++ + G+D G G D + ++ I + +
Sbjct: 896 NDQILGSEADDSLYGDDGDDTIIGGIGRDWLTGGTGADVFS------YITTKEGGDKIVG 949
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
F S ++ +F ++N ++ T+ D+
Sbjct: 950 FTSGTDKFQFVSAAFGNLNSSNFDLVNITSQTTDITG 986
Score = 42.0 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 4/105 (3%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N + + ++ G + T+ T + G ND IG N+V G+
Sbjct: 62 NGTNDNDLIVGGTGGKTLYGNKGEDTLQGGTGGNVLYGGKDNDTCIGGEGNDVASGDDGD 121
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
DV G+ G D F D++
Sbjct: 122 DVAMGNGGDDRVTGDLGDD----TAFGGKGKDRCEGGDGTDWVHG 162
>gi|185134636|ref|NP_001117671.1| matrix metalloproteinase [Oncorhynchus mykiss]
gi|11761266|dbj|BAB19131.1| matrix metalloproteinase [Oncorhynchus mykiss]
Length = 475
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 63/204 (30%), Gaps = 51/204 (25%)
Query: 12 RIADHLLRDQY-WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
++ D W + Y+ + T + E++ + AL W+KV L F
Sbjct: 98 QLGRFTTFDNLKWPTNQLTYRIENYT---PDMSVAEVDNS----IERALQVWAKVSPLRF 150
Query: 71 EET-SIHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI N + +P D + +FD + + +
Sbjct: 151 TRIYRGTADIMISFGNRNHGDFYPFDGPEGTLAHAFSPGADIGG--DAHFDDDEYFTFSS 208
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
+G L A HE GH+LGL H + V SY P +
Sbjct: 209 TRGYNLFLVAAHEFGHSLGLSHSNDPGA---------------LMFPVYSYTEPSTFSLP 253
Query: 175 ASFGYCATPMVSDIVAVQKIYGAP 198
D+ +Q IYG
Sbjct: 254 R----------DDVTGIQYIYGPN 267
>gi|301773296|ref|XP_002922061.1| PREDICTED: stromelysin-1-like [Ailuropoda melanoleuca]
Length = 476
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 62/217 (28%), Gaps = 50/217 (23%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP + D W + Y+ AL W
Sbjct: 88 KPRCGVPDVGDFTTFPGMPRWRKTHLTYRIMNYMLDLPR-------DAVDSAIEKALSLW 140
Query: 63 SKVVDLTFEETSIH-SDIKFIS-----------SNNGYVCTPRY--DSRYFMEINFDKAD 108
+V LTF + +DIK + G V Y + + +FD +
Sbjct: 141 EEVTPLTFSKADDGEADIKILFAVRDHGDFNPFDGPGKVLAHAYPPGPGIYGDAHFDDDE 200
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W GT L A HE+GH+LGL H YPVY D
Sbjct: 201 PWTRDT-SGTNLFLVAAHELGHSLGLFHSADPRALMYPVYNARTDLARLRLS-------- 251
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
D+ +Q +YG+P S +
Sbjct: 252 -----------------QDDVAGIQSLYGSPSVSPDD 271
>gi|33324363|gb|AAQ07962.1| matrix metalloproteinase 13 [Danio rerio]
Length = 475
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 62/188 (32%), Gaps = 27/188 (14%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
D W + + Y+ T + E++ + AL W+ V L F S +D
Sbjct: 109 DYKWKKHQLTYRIGNYT---PDMSVAEVD----DSISKALKVWADVTPLRFTRIYSGTAD 161
Query: 79 IKFISSNNGY-VCTPRYDSRYF------------MEINFDKADVWRYGIGKGTILSHNAL 125
I + + P F + +FD + + Y + L A
Sbjct: 162 IMISFATGDHRDGYPFDGPNGFLAHAFPPFEGIGGDAHFDDDETFSYRSPQYYNLFLVAA 221
Query: 126 HEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQD--SMMDASFGY 179
HE GH+LGL H YP Y VD + + S + P + D+
Sbjct: 222 HEFGHSLGLEHSQDPGALMYPTYVYRDVDRFVLPRDDVNGIQSLYGPNTDVNTDDSKPTP 281
Query: 180 CATPMVSD 187
TP D
Sbjct: 282 PVTPNTCD 289
>gi|11762050|gb|AAG40303.1|AF314519_1 leukotoxin [Mannheimia glucosida]
Length = 953
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 IEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSN 812
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 53/157 (33%), Gaps = 16/157 (10%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I+ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAIEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFE-----------SSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
+D + G N++ GND+ S G D F + + ++
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSNLKDLTFEKVKHN 824
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+++ ++ + K FA + + K I
Sbjct: 825 LVITNSRKEKVTIQDWFREADFAKEVRNYKATKDEKI 861
>gi|329849795|ref|ZP_08264641.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841706|gb|EGF91276.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1545
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 10/138 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDL--LDLTLIGGVKNYIDLNTESWSSI-----GGYEKNMTI 262
T+ G+D +D T V+N +SS+ G Y + + +
Sbjct: 41 NDVLDGGAGSDTMVGGNGNDTFYVDSTGDNVVENSTGGIDTVFSSVSYNLSGRYIEFLNL 100
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G+S + + GNS NN+ +GND DG +G+DT A + +
Sbjct: 101 TGAAHI-NATGNSFANTLTGNSGNNILNGLAGNDSLDGGAGIDTLIGGAGDDTFTVDNAG 159
Query: 323 NAIIVYDANEHKQDFLSD 340
+ + D +
Sbjct: 160 DTVTELTG--EGTDTVRS 175
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 75/218 (34%), Gaps = 32/218 (14%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y ++ + G D + ++ ++S G +
Sbjct: 217 TGGLGNDTYYVQNTGDSVVEA----ANAGFDTIVSSV-------------TYSLAGKQVE 259
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+T+ T + + G+ +V++GNS N+ G+D DGS G D + Y +
Sbjct: 260 NLTLTGGTAL-NATGNGFANVLVGNSGVNMLDGGGGHDRLDGSIGADIMTGGTGNDTYVV 318
Query: 319 YRFENAIIVYDANEHKQDFL---------SDVERLRFADQCIDSV-NVKQRSILEYTASY 368
+ +A+ D + S+VE L + ++L +
Sbjct: 319 DDAYDFTT--EASSGGSDLVESSVNHALGSNVENLTLTGTAAINGIGNILSNVLIGNSGV 376
Query: 369 EDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
L G D ++ S G D F S Y
Sbjct: 377 NILTGGAGNDTYYIQNASDNVVEASSGGNDTVFSSVSY 414
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 2/117 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++ G GND + G N+V +G+D G +G DTF+ + V+
Sbjct: 24 DTETGGPGNDSLAGLDGNDVLDGGAGSDTMVGGNGNDTFYVDSTGDNVVENSTGGIDTVF 83
Query: 329 DANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + +E L I++ + L + L + G D +
Sbjct: 84 SSVSYNLSGRY-IEFLNLTGAAHINATGNSFANTLTGNSGNNILNGLAGNDSLDGGA 139
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 7/174 (4%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAP 312
G N ++A + + G +G+D ++G + N+ F+ S D + + G+DT F
Sbjct: 28 GGPGNDSLAGLDGNDVLDGGAGSDTMVGGNGNDTFYVDSTGDNVVENSTGGIDTVFSSVS 87
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
L R+ + + A S L + L+ A + LI
Sbjct: 88 YNLS--GRYIEFLNLTGAAHINATGNSFANTLTGNSGNNILNGLAGNDSLDGGAGIDTLI 145
Query: 373 QVIGQDVF--ESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGAAA 423
G D F ++ EG D S Y L + + + G+
Sbjct: 146 GGAGDDTFTVDNAGDTVTELTGEGTDTVRSSLNYILSANLEHLILLGASNANGT 199
>gi|38343928|emb|CAE54592.1| putative hatching enzyme [Sphaerechinus granularis]
Length = 419
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 68/197 (34%), Gaps = 48/197 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
++ W+ R +P + LS D+ + R A W +V LTF E +
Sbjct: 43 YVTSSVTWT----RNEPVTYSFGALSNDLNR--DAIKNEMRRAFQVWDEVSGLTFREEAD 96
Query: 76 HS--DIKFISSNNGYVCTPRYDSRYFM----------EINFDKADVWRYGIGKGTILSHN 123
DI+ + + +D R + + +FD ++ W G GT L
Sbjct: 97 SPSVDIRIKFGSFDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETWTIGTYSGTNLFQV 156
Query: 124 ALHEIGHALGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + Y G + ++ DS
Sbjct: 157 AAHEFGHSLGLYHSDVQSALMYPYYRGYNPNFSLDS------------------------ 192
Query: 182 TPMVSDIVAVQKIYGAP 198
DI ++ +YG
Sbjct: 193 ----DDIAGIRSLYGGN 205
>gi|237801157|ref|ZP_04589618.1| calcium binding hemolysin protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024014|gb|EGI04071.1| calcium binding hemolysin protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 2983
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 13/157 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y+ + +I SGG+D L + G ++ G N T+ +
Sbjct: 2221 YETDDVINAGVGDDSISGSGGNDTL--SGEAGDD-----------TVSGGTGNDTLIGGS 2267
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G G+D++ G N+ + +GNDV DG SG D Y +
Sbjct: 2268 GADTLNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGNDLLNGGNGDDTYLFGKGSGQDR 2327
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
VY ANE + D L V+ + + ++
Sbjct: 2328 VYYANETRADKLDTVKLIDLNAGDVSLSRDGYDLVIR 2364
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N T++ I+++ G GND ++G++ N+ + +G+D+ DG +G D
Sbjct: 2800 IYGADGNDTLSGGDGIDALYGDVGNDHLLGDAGNDTLYGGAGDDLLDGGAGNDALTGSEG 2859
Query: 313 SYLYKIYRFENAIIV 327
S Y V
Sbjct: 2860 SDTYAFGVGGGKDSV 2874
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D +L G + I ++ G N T++ + ++++ G G+D + G + N+
Sbjct: 2033 DQSLTGYAGDDIIDAGAGDDAMSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTLNG 2092
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+G+D+ DG +G D A Y + +Y ANE + L
Sbjct: 2093 GTGDDILDGGAGNDLLNGGAGDDTYLFGKGSGQDSIYYANESRLGKL 2139
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 14/170 (8%)
Query: 219 IQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
Q + S GDD L D+ G + ++ ++ G + + T+ + +
Sbjct: 2588 FQVLQGSDGDDTLSGTSSNDVIDAGLGDDTVN-GGGGDDTLKGNDGSDTLNGGDGNDLLQ 2646
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + GN N+V +GNDV +G +G DT+ + S + +
Sbjct: 2647 GGAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYLFGKGSGQDTVNNGG------EVRI 2700
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
K D L + L AD + N + ++ + D
Sbjct: 2701 GKTDTLKLTD-LNTADVQVTRENNDLLIQVIGSSDSLRVASHFAGDATAG 2749
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ ID+ ++ G N T+ + + G GND++ G + N++ GND+
Sbjct: 1858 STDDIIDVAAGDD-TVSGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIGNDI 1916
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIV---YDANEHKQDFLS 339
DG +G D A Y + + Y+A K D +
Sbjct: 1917 LDGGAGNDRLDGGAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVK 1961
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 5/149 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ ID ++ G + T++ +++ G+ GNDV+ G + ++V + G+D
Sbjct: 2421 TSADDTIDAGAGDD-TVNGMAGSDTLSGGAGADTLNGNDGNDVLQGGADDDVLYGGDGSD 2479
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE---HKQDFLSDVERLRFADQCIDS 353
V DG +G D A +Y + +Y ANE K D + + L +D +
Sbjct: 2480 VLDGGAGNDRLDGGAGDDIYIFGKGAGQDSIYYANETRAGKMDTVKLTD-LNASDVSVTR 2538
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + T +I D
Sbjct: 2539 DGMDLFIRVNGTTDSLRVIYHFLGDATAG 2567
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 10/148 (6%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------S 249
+ G+++Y ++ Q T++D L G I T
Sbjct: 199 SHFNQDGDSVYAVDQLQFAD---STVWDGAKLKTEVLKTTGDNDTIIGYQTADQLFGLAG 255
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + + +++ G G+D ++G + N+ GND+ DG +G D+
Sbjct: 256 NDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSLAG 315
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDF 337
S Y R +Y++ ++ +
Sbjct: 316 GLGSDTYVFRRGSGQDTIYNSVSNEANT 343
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 13/143 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G+N YK++ + T + + N + S SI G N
Sbjct: 17 SNDGDNAYKLDEIRFADG---TTWKPDQVKTM-AAFKSTDGNDVLTGYASDDSISGGVGN 72
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDTFFYY 310
TI +++ G +G+D + G N++ + GND DG G DT
Sbjct: 73 DTIYGRAGNDTLSGEAGSDTLYGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGG 132
Query: 311 APSYLYKIYRFENAIIVYDANEH 333
S Y + + + +
Sbjct: 133 MGSDTYVLRKGSGQDQINNYTSD 155
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 41/200 (20%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+T+ + DD +D G + ++ S ++ G T+ + + + G + +DV
Sbjct: 2416 ETLSGTSADDTID---AGAGDDTVNGMAGSD-TLSGGAGADTLNGNDGNDVLQGGADDDV 2471
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-------------------- 319
+ G ++V +GND DG +G D + + + IY
Sbjct: 2472 LYGGDGSDVLDGGAGNDRLDGGAGDDIYIFGKGAGQDSIYYANETRAGKMDTVKLTDLNA 2531
Query: 320 ----RFENAIIVYDANEHKQDFLS-------------DVERLRFADQCIDSVNVKQRSIL 362
+ + ++ D L ++R++FAD + +L
Sbjct: 2532 SDVSVTRDGMDLFIRVNGTTDSLRVIYHFLGDATAGYQIDRIQFADGSFLDQAAIKFQVL 2591
Query: 363 EYTASYEDLIQVIGQDVFES 382
+ + + L DV ++
Sbjct: 2592 QGSDGDDTLSGTSSNDVIDA 2611
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +A + + G +GND + G + ++V +GND DG +G D + + + I
Sbjct: 1525 LNLAGTGENDVLAGGAGNDTLSGAAGDDVLDGRTGNDRLDGGAGDDIYLFGKGAGQDTIS 1584
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+E + D SD+ +R A+ + +VN S+
Sbjct: 1585 SYEGRVGKLDTVRLTSLNASDISLVRDANDLVINVNGTADSLR 1627
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + +S+ G GNDV+ G + ++ G+D+ DG +G D+ +
Sbjct: 1193 NISGRAGADILDGGAGKDSLYGDEGNDVLRGEADDDTLNGGIGDDLLDGGAGNDSLAGGS 1252
Query: 312 PSYLYKIYRFENAIIVYDA 330
S Y + + ++
Sbjct: 1253 GSDTYVFRKGSGQDTINNS 1271
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 43/139 (30%), Gaps = 24/139 (17%)
Query: 199 KGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ + S + IY + G+D L G
Sbjct: 2775 STDSDDTLRGFATDDVISAGLGDDAIYGADGNDTL----------------------SGG 2812
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + ++G +GND + G + +++ +GND GS G DT+ +
Sbjct: 2813 DGIDALYGDVGNDHLLGDAGNDTLYGGAGDDLLDGGAGNDALTGSEGSDTYAFGVGGGKD 2872
Query: 317 KIYRFENAIIVYDANEHKQ 335
+ ++ +
Sbjct: 2873 SVNNYDASTSNDTVQFDAS 2891
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +++ G G+D ++G N+ GND+ DG G+D+
Sbjct: 623 TLSGRAGNDILDGGEGNDTLYGEDGSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGK 682
Query: 312 PSYLYKIYRFENAIIVYDANEHKQD 336
S Y + + ++ +
Sbjct: 683 GSDTYTFRKGYGQDTINNSAYNDTT 707
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 33/69 (47%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T++ ++++G G D++ G N++ +GND +G G DT+ +
Sbjct: 1369 LKGASGNDTLSGRAGNDALLGGEGKDMLNGEDGNDILDGGAGNDTLNGGYGSDTYVFRRG 1428
Query: 313 SYLYKIYRF 321
+ + +
Sbjct: 1429 AGQDTVNNY 1437
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND + G + N+ GND DG G D+ S +Y ++R + +
Sbjct: 1030 GEDGNDTLFGGAGNDTLNGGYGNDSLDGGLGNDSLSGGVGSDIY-VFRKGAGQDTINNSA 1088
Query: 333 HKQDFLSDVERLRFADQCIDSVNVK 357
+ + ++ +RF + ++++
Sbjct: 1089 YNDTTVGKLDVIRFEGLNAEDISIR 1113
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 3/108 (2%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+K + T+ S+ GY + I ++V G GND ++G + +
Sbjct: 1834 FWNQSVIKARVLQGTDGDQSLTGYSTDDIIDVAAGDDTVSGGGGNDTLLGGAGADRLNGD 1893
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND+ G +G D + I D +L
Sbjct: 1894 DGNDLLQGGTGNDILNGGIGND---ILDGGAGNDRLDGGAGDDAYLFG 1938
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I+ + + G +G D + G+ N+V + +D +G G D A
Sbjct: 1185 LKGLAGNDNISGRAGADILDGGAGKDSLYGDEGNDVLRGEADDDTLNGGIGDDLLDGGAG 1244
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + + QD +++
Sbjct: 1245 NDSLAGGSGSDTYVFRKGS--GQDTINN 1270
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY+ + + +++ G +GND ++G ++ GND+ DG +G DT
Sbjct: 1360 IFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKDMLNGEDGNDILDGGAGNDTLNGGYG 1419
Query: 313 SYLYKIYRFENAIIV 327
S Y R V
Sbjct: 1420 SDTYVFRRGAGQDTV 1434
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 36/155 (23%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF---- 321
++++G +GND++ G + ++V SGND G G DT+ + S I +
Sbjct: 465 DGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGSDTYIFRKGSGQDTILNYAYSD 524
Query: 322 ------------ENAIIVYDANEHKQDFL--------------------SDVERLRFADQ 349
D + +++++F+D
Sbjct: 525 ATQNKLDVVKLEGLTASQVSIRREGDDLIFQISDTGETLRVSSHFSSDAYAIDQVQFSDG 584
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++L TA + + +D +
Sbjct: 585 IFWDKTQITAALLVGTAGDDSITGYATEDKLSGLA 619
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
ND + G + N+ G+D DG SG DT + S +Y + ++ +
Sbjct: 849 ANDTLKGGADNDSLSGGYGDDFLDGGSGNDTLYGGYGSDVYVFGHGSGQDTINNSAYNDT 908
Query: 336 DF 337
Sbjct: 909 TV 910
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + N ++ + + + G+D + G+ N+ +G+D G +G DT +
Sbjct: 2209 LRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIGGSG 2268
Query: 313 SYLYKIYRFEN 323
+ ++
Sbjct: 2269 ADTLNGDDGDD 2279
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 7/136 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+++D+ LT G N T + G N T++ + + G G D +
Sbjct: 404 SVWDTSFIKSALLTGNAGDDNITGYETADM--LKGLRGNDTLSGRAGDDVLDGGDGRDTL 461
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G N+ +GND+ G +G D + + + I + QD + +
Sbjct: 462 NGEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGSDTYIFRKGS--GQDTILN 519
Query: 341 VERLRFADQCIDSVNV 356
++D + ++V
Sbjct: 520 ---YAYSDATQNKLDV 532
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 2/129 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG E + T+ + + + G +GND + G + ++ +G D G G D A
Sbjct: 1167 LGGTEDDDTLVGYDTDDVLKGLAGNDNISGRAGADILDGGAGKDSLYGDEGNDVLRGEAD 1226
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ A S + F + + TA+ D+I
Sbjct: 1227 DDTLN-GGIGDDLLDGGAGNDSLAGGSGSDTYVFRKGSGQDT-INNSVYNDTTANKLDVI 1284
Query: 373 QVIGQDVFE 381
++ G ++ +
Sbjct: 1285 KLDGLNLSD 1293
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 11/87 (12%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T +D G L + ++ GY+ + I + V G +GND +
Sbjct: 1651 TFWDQGTVKSEVLRGTAADQ-----------TLAGYQADDQIDAGAGDDIVSGGAGNDTL 1699
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF 307
G ++ GNDV G +G D
Sbjct: 1700 KGGIGSDTLNGEEGNDVLRGGAGNDIL 1726
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ G+D++ G + +V +SGND G +G D + E+ + D
Sbjct: 1351 LIGTVGDDIIFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKD---MLNGEDGNDILDG 1407
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+D + Q ++ Y
Sbjct: 1408 GAGNDTLNGG----YGSDTYVFRRGAGQDTVNNYA 1438
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 34/189 (17%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D + V + + ++ G + N T+ +++ G GND + G
Sbjct: 1005 GGNDTISGRGGDDVLDG----GDGKDTLSGEDGNDTLFGGAGNDTLNGGYGNDSLDGGLG 1060
Query: 286 NNVFFESSGNDV--FDGSSGLDTFFYYAPSYLY----KIYRFENAIIVYDANEHKQDFLS 339
N+ G+D+ F +G DT A + + RFE + + D L
Sbjct: 1061 NDSLSGGVGSDIYVFRKGAGQDTINNSAYNDTTVGKLDVIRFEGLNAEDISIRRESDDLI 1120
Query: 340 ------------------------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+++L+FAD + + + ++L T + L+
Sbjct: 1121 LQIKETGDTLRVTSHFSASAISGYAIDQLQFADGTLMDNSQIKLALLGGTEDDDTLVGYD 1180
Query: 376 GQDVFESMK 384
DV + +
Sbjct: 1181 TDDVLKGLA 1189
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 31/120 (25%), Gaps = 12/120 (10%)
Query: 228 DDLLDLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + I L S A +I+ +G+D + G + N
Sbjct: 2006 IDRIQFADGSFWDQSIIKLQVLKGSDADQSLTGY--AGDDIID---AGAGDDAMSGGAGN 2060
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENAIIVYDANEHKQDFLSD 340
+ SG D G G D A + I + + +L
Sbjct: 2061 DTLSGGSGLDTISGDEGDDNLNGGAGNDTLNGGTGDDILDGGAGNDLLNGGAGDDTYLFG 2120
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 249 SWSSIGGY-EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S S+I GY + A T++E+ + +++G A++V S +DV G G DT
Sbjct: 751 SASTIYGYAIDQLQFADGTILENAQIRAA--LLLGTDADDVMTGYSTDDVIAGDGGNDTL 808
Query: 308 FYYAPSY 314
+ S
Sbjct: 809 SGGSGSD 815
>gi|311263815|ref|XP_003129856.1| PREDICTED: collagenase 3 [Sus scrofa]
Length = 470
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 65/187 (34%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ + A WS V L F + +
Sbjct: 108 RTLKWSQMNLTYRIVNYTPDLTHSEV-------EKAFKKAFKVWSDVTPLNFTRIHNGTA 160
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 161 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 219
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 220 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 277
Query: 181 ATPMVSD 187
TP D
Sbjct: 278 KTPDKCD 284
>gi|254512564|ref|ZP_05124630.1| hemolysin-type calcium-binding region [Rhodobacteraceae bacterium
KLH11]
gi|221532563|gb|EEE35558.1| hemolysin-type calcium-binding region [Rhodobacteraceae bacterium
KLH11]
Length = 2828
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 85/281 (30%), Gaps = 43/281 (15%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G NG G +D + T ++Y + +++ D + D+ A G+
Sbjct: 1281 GGENGDVLSGGFGDDTIDGGAGTDTLNYNLDSNTVDDGQNEVHFDHVDVDLAA-----GS 1335
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--------- 248
+L + + I+ I+ + G+D + +D N
Sbjct: 1336 ATVTLSDG----DTDTDTLSAIENIFATAGNDTVAGDGFANELRGLDGNDTISGRDGSDR 1391
Query: 249 -----SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G N ++ + +++ G ND+++G N+ +G+D+ G G
Sbjct: 1392 LFGGAGADTLAGDAGNDFVSAGSGDDTLTGGGENDLLLGEDGNDDLSGGTGDDILSGGRG 1451
Query: 304 LDTFFYYAPSYLYKIY--------------------RFENAIIVYDANEHKQDFLSDVER 343
DT S A + + D LS +E
Sbjct: 1452 NDTIKGGTGSDTAHYGLVEEDTENDLAGYSGVNADLSTNTATVTLTDGTTETDTLSGIEN 1511
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L + ++L + + G D +
Sbjct: 1512 LIGTAGDDTLTGDGEANVLTALNGNDTINAGSGNDTIDGSG 1552
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 48/174 (27%), Gaps = 18/174 (10%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G + L+ + + + G I +++G G+D + G
Sbjct: 1695 ASGTATVSLSDDSTETDTLLNIEG----VVGSTGADQIVGDENANTLIGKDGDDTLTGGD 1750
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--------------RFENAIIVYDA 330
N+V G+D G G DT Y +A +
Sbjct: 1751 GNDVLSGGRGSDTLRGGEGFDTVNYSLDIETADEGEPEPVNAESVTLDLATGSATVTLTD 1810
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D LS +E + Q +++ + + G D
Sbjct: 1811 GSTETDTLSGIESVVGTGGADIISGDNQDNVIVGLDGADTISGGAGDDKISGAG 1864
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 13/135 (9%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T+ + V+G G+D + G +V G+D DG +G DT Y S
Sbjct: 1258 NDTLYGDADNDIVLGGEGDDTLYGGENGDVLSGGFGDDTIDGGAGTDTLNYNLDSNTVDD 1317
Query: 319 Y-------------RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+A + + D LS +E + + L
Sbjct: 1318 GQNEVHFDHVDVDLAAGSATVTLSDGDTDTDTLSAIENIFATAGNDTVAGDGFANELRGL 1377
Query: 366 ASYEDLIQVIGQDVF 380
+ + G D
Sbjct: 1378 DGNDTISGRDGSDRL 1392
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 43/218 (19%)
Query: 204 NNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIG--------GVKNYIDLNTE--SWS 251
+ IY + S I T+ G D ++ +L G I+L+
Sbjct: 246 DQIYGRDGADVLSGGIGSDTLDGGSGIDTVNYSLDAEDADGYGDGSGFDINLSEGITRRV 305
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I +++ I+ IE+ VGS ND + GN NV G+D G G D +
Sbjct: 306 DIYSVQEDTLIS----IENAVGSDVNDRLTGNDDANVLIGGGGDDYITGGDGADVLAGGS 361
Query: 312 PSY---------------------------LYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ + I +D L +E
Sbjct: 362 GADRIDGGSGIDTVHYGLDAEDLDGYGDGTGFNINLSTGITHRLGDPGSHEDTLVAIENA 421
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ + ++ ++L + + L+ G D+
Sbjct: 422 IGSNARDNITGTERSNLLLGGDANDTLVGGAGADILGG 459
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 18/149 (12%)
Query: 193 KIYGAPKGSL------GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIG------G 238
+IYG+ ++ ++IY TI G+D ++ ++ G
Sbjct: 129 RIYGSEVSNILVGAAGQDSIYGRGGSDVLAGGSGADTIDGGSGNDTVNYSIDSDDADGYG 188
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVI--ESVVGSSGNDVVIGNSANNVFFESSGND 296
N D+N + + ++++ + T+I E+ +GS ND + G NV GND
Sbjct: 189 DGNGFDINLTA--GVTRKFNDLSVQEDTLISIENAIGSDVNDRLTGTGDANVLVGRGGND 246
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
G G D S + +
Sbjct: 247 QIYGRDGADVLSGGIGSDTLDGGSGIDTV 275
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 75/211 (35%), Gaps = 37/211 (17%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN----YIDLNTE---------- 248
G++I+ I + +GG D+++ ++ G + +IDL +E
Sbjct: 55 GDDIF------AGGDGIDVFHGNGGQDIVNYSVDDGDSDGNGFHIDLASERTYYIYDQNT 108
Query: 249 --------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
S + G ++ I V +VG++G D + G ++V SG D DG
Sbjct: 109 LWLEDYLHSIEGVFGSTRDDRIYGSEVSNILVGAAGQDSIYGRGGSDVLAGGSGADTIDG 168
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIV---------YDANEHKQDFLSDVERLRFADQCI 351
SG DT Y S Y N + ++ ++D L +E +D
Sbjct: 169 GSGNDTVNYSIDSDDADGYGDGNGFDINLTAGVTRKFNDLSVQEDTLISIENAIGSDVND 228
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++L + + G DV
Sbjct: 229 RLTGTGDANVLVGRGGNDQIYGRDGADVLSG 259
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ + TI G D + G + N D S +
Sbjct: 1540 NAGSGNDTIDGSGSGNN-----TIEGGTGTDTVSYQNHGELTNQRDGVALDLESGTVQKG 1594
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + + IE+ GS ND++ G+SA N GND+ G SG DT +
Sbjct: 1595 GYSDSL-SGIENATGSENNDILRGDSAANTLDGYLGNDILAGGSGDDTLSGGDGNDQLS 1652
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 28/205 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ K + + D+ DL GV + NT + + G +
Sbjct: 1447 SGGRGNDTIKGGTGSDTAHYGLVEEDTEN----DLAGYSGVNADLSTNTATVTLTDGTTE 1502
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA------- 311
T+ + IE+++G++G+D + G+ NV +GND + SG DT
Sbjct: 1503 TDTL---SGIENLIGTAGDDTLTGDGEANVLTALNGNDTINAGSGNDTIDGSGSGNNTIE 1559
Query: 312 PSYLYKIYRFENAIIVYDANEHK--------------QDFLSDVERLRFADQCIDSVNVK 357
++N + + + D LS +E ++
Sbjct: 1560 GGTGTDTVSYQNHGELTNQRDGVALDLESGTVQKGGYSDSLSGIENATGSENNDILRGDS 1619
Query: 358 QRSILEYTASYEDLIQVIGQDVFES 382
+ L+ + L G D
Sbjct: 1620 AANTLDGYLGNDILAGGSGDDTLSG 1644
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 43/146 (29%), Gaps = 13/146 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------------SWSSIG 254
+ T+ D + G +DL+ ++ +
Sbjct: 1856 GDDKISGAGAGSNTLDGGADTDTVSYLGQIGGGVQVDLSAGQATKSAENVDTISNFENAE 1915
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + T+ ++G+SG D + G + + +G D G +G DT A
Sbjct: 1916 GTIFDDTLTGDAGNNILLGNSGADTLYGGAGADTLEGGAGFDRLSGGAGNDTLHGDAGLD 1975
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + D + +
Sbjct: 1976 RADYSETDVSQVTVDFDAGTATITRN 2001
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 58/210 (27%), Gaps = 33/210 (15%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTL-IGGVKNYI--------------DLN 246
+ IY I T+ G D + + GG I DLN
Sbjct: 548 DTIYGRGGNDVLIGDQGIDTLDGGEGIDTVRYNVADGGFSGSIEVDLVEGISWYLDSDLN 607
Query: 247 ----TESWSSIGGYEKNMT---IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ S+I + I + G G+D + G N+ G D D
Sbjct: 608 RVRVEDHLSNIENVTGSTASDKIYGDGTQNLLTGDWGDDDIKGRGGNDTLSGGGGQDTLD 667
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIV---------YDANEHKQDFLSDVERLRFADQC 350
G G D Y + Y + D +D L +E + + Q
Sbjct: 668 GGEGFDIVHYSQDADDRDGYGGSTGFDINLELGLTRRADDLSVHEDTLVGIEGVVGSAQD 727
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ++L + L DV
Sbjct: 728 DVITGNDEANLLSGAGGDDTLEGGDNNDVL 757
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 24/145 (16%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD----------------- 232
A KIYG +L + + K T+ GG D LD
Sbjct: 626 ASDKIYGDGTQNLLTGDWG-DDDIKGRGGNDTLSGGGGQDTLDGGEGFDIVHYSQDADDR 684
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFF 290
G I+L + ++++ + T+ IE VVGS+ +DV+ GN N+
Sbjct: 685 DGYGGSTGFDINLELG----LTRRADDLSVHEDTLVGIEGVVGSAQDDVITGNDEANLLS 740
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYL 315
+ G+D +G D + +
Sbjct: 741 GAGGDDTLEGGDNNDVLYGGQGNDT 765
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNY---IDLN-TESWSSIGGYEKNMTI-AQHTV---IESVVG 273
+Y G D + L G + +DL ++ + N I AQ IE+V+G
Sbjct: 466 LYGGEGLDTVAYNLDPGDTDTGVSVDLAFAGTFGVTFWLDSNNVIQAQEDALFSIENVIG 525
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
S +D++ G+ NN+ +GND G G D + +
Sbjct: 526 SDHSDIIKGDDGNNLLGGQAGNDTIYGRGGNDVLIGDQGIDTLDGGEGIDTV 577
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 69/220 (31%), Gaps = 34/220 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL------------IGGVKNYI 243
G + G+ T+ G D ++ +L + +
Sbjct: 1742 GDDTLTGGDG----NDVLSGGRGSDTLRGGEGFDTVNYSLDIETADEGEPEPVNAESVTL 1797
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL T S +++ + + + IESVVG+ G D++ G++ +NV G D G +G
Sbjct: 1798 DLATGS-ATVTLTDGSTETDTLSGIESVVGTGGADIISGDNQDNVIVGLDGADTISGGAG 1856
Query: 304 LD----------TFFYYAPSYLYKIYRFENAIIVYDANEHK-------QDFLSDVERLRF 346
D T A + + D + + D +S+ E
Sbjct: 1857 DDKISGAGAGSNTLDGGADTDTVSYLGQIGGGVQVDLSAGQATKSAENVDTISNFENAEG 1916
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+IL + + L G D E F
Sbjct: 1917 TIFDDTLTGDAGNNILLGNSGADTLYGGAGADTLEGGAGF 1956
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 2/98 (2%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ D + G +N+ ND G +G D +
Sbjct: 416 VAIENAIGSNARDNITGTERSNLLLGGDANDTLVGGAGADIL-GGGNGLDHLYGGEGLDT 474
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ Y+ + D V+ L FA + + ++++
Sbjct: 475 VAYNLDPGDTDTGVSVD-LAFAGTFGVTFWLDSNNVIQ 511
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 30/75 (40%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+++G ND + G+ N+ ++G+D +G +G D + + +
Sbjct: 952 VEALIGGRDNDTLRGDDIGNILRGNAGDDHLEGRAGADILVGGEGNDTLDGGSSLDTVDY 1011
Query: 328 YDANEHKQDFLSDVE 342
+ LS E
Sbjct: 1012 GSSAAGVHVDLSAGE 1026
Score = 44.7 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+ GS+ D ++G N+ ++G+D+ +G D A K ++ ++
Sbjct: 1195 IEAATGSAHADTLLGTDEVNILQGNAGDDLLEGFGDDDRLIGGAGEDTVKGGTGDDVVVG 1254
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D N+ +D + + + + +L + + G D
Sbjct: 1255 GDGNDTLYGD-ADNDIVLGGEGDDTLYGGENGDVLSGGFGDDTIDGGAGTDTLN 1307
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 12/116 (10%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDTFFYYAPSY 314
+ E+ +G G+DV+ GN N++ G+D+F G G+D F
Sbjct: 16 GGSEDETFLGLGGDDVIYGNGGNDILIGGGGDDNLNGAEGDDIFAGGDGIDVFHGNGGQD 75
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
I + D N D S+ + + + + ++ +D
Sbjct: 76 ---IVNYSVDDGDSDGNGFHIDLASERTYYIYDQNTLWLEDYLHSIEGVFGSTRDD 128
Score = 38.6 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 7/106 (6%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG + + T++ G D D + + +D + +
Sbjct: 1941 LYGGAGADTLEGGAGFDRLSGGA-GNDTLHGDAGLDRADYSETDVSQVTVDFDAGT---- 1995
Query: 254 GGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+N T+ IE +GS+G D I + +G D
Sbjct: 1996 ATITRNGATEVDTLNSIEGAIGSAGADTFIAGATGLSLDGGAGADT 2041
>gi|229825052|ref|ZP_04451121.1| hypothetical protein GCWU000182_00402 [Abiotrophia defectiva ATCC
49176]
gi|229790799|gb|EEP26913.1| hypothetical protein GCWU000182_00402 [Abiotrophia defectiva ATCC
49176]
Length = 1152
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 3/112 (2%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + I+ S GY N ++ +++ G G D++ G + ++ +
Sbjct: 946 ISGFNDQDDIINGLAGDDS-TYGYAGNDSLYGGEGNDNLTGDDGEDILEGGTGDDRLYGG 1004
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY--DANEHKQDFLSDVE 342
GND DG SG D + Y R ++ D +D + E
Sbjct: 1005 VGNDYLDGGSGNDYLEGGIGNDTYIFGRNSGNDTIFENDRTPDNRDRVIFGE 1056
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + I+ + S I GY N ++ +S+ GNDV+IG + ++
Sbjct: 346 ISGFNDQDDIINGLAGNDS-IYGYAGNDSLYGGEGDDSLYADVGNDVLIGGAGDDTLVGG 404
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G D+ DG +G D + + Y + D + D +
Sbjct: 405 EGEDILDGGAGNDKLYGGNSNG----YSVGGNDTYIFGRGYGVDTIRDADT 451
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + I+ + S I GY N ++ +S+ GNDV+IG + ++
Sbjct: 546 ISGFNDQDDIINGLAGNDS-IYGYAGNDSLYGGEGDDSLYADVGNDVLIGGAGDDTLVGG 604
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G D+ DG +G D + + Y + D + D +
Sbjct: 605 EGEDILDGGAGNDKLYGGNSNG----YSVGGNDTYIFGRGYGVDTIRDADT 651
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-------SGL 304
S+ G E + ++ + ++G +G+D ++G ++ +GND G G
Sbjct: 173 SLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGNSNGYSVGGN 232
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DT+ + + I + D + K+D
Sbjct: 233 DTYIFGRGYGVDTIRDADTTEGNLDVIKMKEDI 265
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-------SGL 304
S+ G E + ++ + ++G +G+D ++G ++ +GND G G
Sbjct: 773 SLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGNSNGYSVGGN 832
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DT+ + + I + D + K+D
Sbjct: 833 DTYIFGRGYGVDTIRDADTTEGNLDVIKMKEDI 865
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + I+ +I G+ N ++ +S+ GNDV+IG + ++
Sbjct: 146 ISGFNDQDDIINGLAGDD-TICGFAGNDSLNGGEGDDSLYADVGNDVLIGGAGDDTLVGG 204
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G D+ DG +G D + + Y + D + D +
Sbjct: 205 EGEDILDGGAGNDKLYGGNSNG----YSVGGNDTYIFGRGYGVDTIRDADT 251
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + I+ +I G+ N ++ +S+ GNDV+IG + ++
Sbjct: 746 ISGFNDQDDIINGLAGDD-TICGFAGNDSLNGGEGDDSLYADVGNDVLIGGAGDDTLVGG 804
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G D+ DG +G D + + Y + D + D +
Sbjct: 805 EGEDILDGGAGNDKLYGGNSNG----YSVGGNDTYIFGRGYGVDTIRDADT 851
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 29/83 (34%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GND + G + N+ + G+D G D A E+ +
Sbjct: 354 DIINGLAGNDSIYGYAGNDSLYGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGG 413
Query: 329 DANEHKQDFLSDVERLRFADQCI 351
N+ S+ + D I
Sbjct: 414 AGNDKLYGGNSNGYSVGGNDTYI 436
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 29/83 (34%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GND + G + N+ + G+D G D A E+ +
Sbjct: 554 DIINGLAGNDSIYGYAGNDSLYGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGG 613
Query: 329 DANEHKQDFLSDVERLRFADQCI 351
N+ S+ + D I
Sbjct: 614 AGNDKLYGGNSNGYSVGGNDTYI 636
Score = 43.6 bits (101), Expect = 0.100, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D + G + N+ G+D G D A E+ +
Sbjct: 154 DIINGLAGDDTICGFAGNDSLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGG 213
Query: 329 DANEHKQDFLSDVERLRFADQCI 351
N+ S+ + D I
Sbjct: 214 AGNDKLYGGNSNGYSVGGNDTYI 236
Score = 43.6 bits (101), Expect = 0.100, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D + G + N+ G+D G D A E+ +
Sbjct: 754 DIINGLAGDDTICGFAGNDSLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGG 813
Query: 329 DANEHKQDFLSDVERLRFADQCI 351
N+ S+ + D I
Sbjct: 814 AGNDKLYGGNSNGYSVGGNDTYI 836
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG G D++ G + N+ + + ND G G DT+ + + I + D
Sbjct: 2 VGGEGEDILDGGAGNDKLYGGNSNDYSVG--GNDTYIFGRGYGVDTIRDADTTEGNLDVI 59
Query: 332 EHKQDF 337
+ K+D
Sbjct: 60 KMKEDI 65
>gi|11762052|gb|AAG40304.1|AF314520_1 leukotoxin [Mannheimia glucosida]
Length = 953
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSN 812
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 7/135 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D + + +
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSNLKDLTFEKVKHN 824
Query: 334 KQDFLSDVERLRFAD 348
S E++ D
Sbjct: 825 LVITNSKKEKVTIQD 839
>gi|119385192|ref|YP_916248.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119374959|gb|ABL70552.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 561
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 29/189 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQK-----------DSPFIQTIYDSGGDDLL-----DLTLIGGV 239
G + IY E + +Y G+D L + TL GG
Sbjct: 126 GGATAGHADTIYGDEGNDRIWAGGGGDLVYGGDDNDLVYGDAGNDTLHGDAGNDTLAGGA 185
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + I G + + + V G +G+D ++G + ++ +G D D
Sbjct: 186 DHDL---------IYGGTGDDLLLGEAGNDLVDGGAGHDSLLGGAGSDTLLGGAGRDTLD 236
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD----VERLRFADQCIDSVN 355
G +G DT + ++ + I ++A E D S V+ F +Q +
Sbjct: 237 GGAGADTLTGGLDADVFIADGTADTITDFNATEGIGDADSSNNDLVDLSAFYNQTRLAAW 296
Query: 356 VKQRSILEY 364
L++
Sbjct: 297 NAANPGLQF 305
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 61/200 (30%), Gaps = 28/200 (14%)
Query: 204 NNIYKIEVQQKDSP-----FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ +Y + + T+Y GG D + ++ G
Sbjct: 29 DLVYGNDGNDLMNGSDVDMGADTLYGGGGSDTITGSIGGDS--------------IDGGD 74
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL--- 315
I+S GND + G + ++ G+D+ G +G D
Sbjct: 75 GDDYLYGARIDS--TPDGNDTIFGGAGDDYIQGMMGSDLLYGGTGNDRIVGDGGGATAGH 132
Query: 316 -YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQ 373
IY E ++ + D L + D D+++ + L A ++ +
Sbjct: 133 ADTIYGDEGNDRIWAGGGGDLVYGGDDNDLVYGDAGNDTLHGDAGNDTLAGGADHDLIYG 192
Query: 374 VIGQD--VFESMKHFYEFGL 391
G D + E+ + G
Sbjct: 193 GTGDDLLLGEAGNDLVDGGA 212
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 45/149 (30%), Gaps = 14/149 (9%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---GNDVFDGSSGLDTFFY 309
I G N + + +G D+V GN N++ S G D G G DT
Sbjct: 4 IPGTNGNDILNGTPQDDEFHRGNGFDLVYGNDGNDLMNGSDVDMGADTLYGGGGSDTITG 63
Query: 310 YAPSYLYKIYRFEN--AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
++ D+ D + F D + S L Y +
Sbjct: 64 SIGGDSIDGGDGDDYLYGARIDSTPDGNDTI-------FGGAGDDYIQGMMGSDLLYGGT 116
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
D +++G + H EG D
Sbjct: 117 GND--RIVGDGGGATAGHADTIYGDEGND 143
>gi|296213291|ref|XP_002753210.1| PREDICTED: matrix metalloproteinase-17 [Callithrix jacchus]
Length = 614
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 24/133 (18%)
Query: 28 IRYKPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIHS-DI 79
+ P LS+ + +P ++ R +AL WS + L F E + + DI
Sbjct: 133 LTAAPTKWNKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADI 192
Query: 80 KFISS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHN 123
+ S N+GY + + +FD + W + G L
Sbjct: 193 QIDFSKADHNDGYPFDGPGGTVAHAFFPSDHHTAGDTHFDDDEAWTFRSSDAHGMDLFAV 252
Query: 124 ALHEIGHALGLMH 136
A+HE GHA+GL H
Sbjct: 253 AVHEFGHAIGLGH 265
>gi|73621170|sp|Q9ETX2|LKTA_MANGL RecName: Full=Leukotoxin; Short=Lkt
gi|11762046|gb|AAG40301.1|AF314517_1 leukotoxin [Mannheimia glucosida]
gi|11762048|gb|AAG40302.1|AF314518_1 leukotoxin [Mannheimia glucosida]
Length = 953
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSN 812
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 53/157 (33%), Gaps = 16/157 (10%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFE-----------SSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
+D + G N++ GND+ S G D F + + ++
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSNLKDLTFEKVKHN 824
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+++ ++ + K FA + + K I
Sbjct: 825 LVITNSRKEKVTIQDWFREADFAKEVRNYKATKDEKI 861
>gi|291567843|dbj|BAI90115.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 884
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 58/155 (37%), Gaps = 7/155 (4%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
Y I+ + + I + G+D L G + L + +I G + T+
Sbjct: 637 GTSYIIKFETAAPDSVVPIRGTAGNDTL----TGTRDADLLLGLDGHDTIKGLGGDDTLM 692
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G GND ++G + +GND +G +G D + ++ E+
Sbjct: 693 GGFGNDYLDGGPGNDSLVGGGGRDTLIGGAGNDTLNGGAGQDILTGGPGADIFVFGFGES 752
Query: 324 AIIVYDAN---EHKQDFLSDVERLRFADQCIDSVN 355
++ +H DF +++ Q + +N
Sbjct: 753 RVMQAKRRVYPDHITDFDIGTDKIDLLKQDGEEMN 787
>gi|119484280|ref|ZP_01618897.1| probable aggregation factor core protein MAFp3, isoform C [Lyngbya
sp. PCC 8106]
gi|119457754|gb|EAW38877.1| probable aggregation factor core protein MAFp3, isoform C [Lyngbya
sp. PCC 8106]
Length = 1582
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 61/167 (36%), Gaps = 12/167 (7%)
Query: 202 LGNNIYKIEVQQK---DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI 253
GN++ + T+Y GDD L + L G + N I +
Sbjct: 102 SGNDVLGGNQDNDFLLGNKGDDTLYAGKGDDTLTGGQNNDILFGDIGNDIVFGDRGSDEV 161
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + + V G G+D++ G+ N+ G+D G G DTFF A +
Sbjct: 162 LGNSGDDVLYGGKENDLVAGGVGDDILFGDLGNDTLLGDLGSDTITGGDGNDTFFLGAGT 221
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + + + + +QD + + L F + I + S
Sbjct: 222 GGFSLAEAD----IINDFNVEQDEIGLLNLLTFDELNIYQGTDEFVS 264
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 1/131 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G E N I +++ G SGNDV+ GN N+ + G+D G DT
Sbjct: 79 SILGTEGNDMIFSLAGNDTIFGLSGNDVLGGNQDNDFLLGNKGDDTLYAGKGDDTLTGGQ 138
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + N I+ D + S + L + IL + L
Sbjct: 139 NNDIL-FGDIGNDIVFGDRGSDEVLGNSGDDVLYGGKENDLVAGGVGDDILFGDLGNDTL 197
Query: 372 IQVIGQDVFES 382
+ +G D
Sbjct: 198 LGDLGSDTITG 208
>gi|11762056|gb|AAG40306.1|AF314522_1 leukotoxin [Mannheimia glucosida]
Length = 953
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSN 812
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 53/157 (33%), Gaps = 16/157 (10%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFE-----------SSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
+D + G N++ GND+ S G D F + + ++
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSNLKDLTFEKVKHN 824
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+++ ++ + K FA + + K I
Sbjct: 825 LVITNSRKEKVTIQDWFREADFAKEVRNYKATKDEKI 861
>gi|11762054|gb|AAG40305.1|AF314521_1 leukotoxin [Mannheimia glucosida]
Length = 946
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 716 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 775
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 776 DDIFVHRQGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 812
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 704 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 760
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 761 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSN 805
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 53/157 (33%), Gaps = 16/157 (10%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 702 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 757
Query: 277 NDVVIGNSANNVFFE-----------SSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
+D + G N++ GND+ S G D F + + ++
Sbjct: 758 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSNLKDLTFEKVKHN 817
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+++ ++ + K FA + + K I
Sbjct: 818 LVITNSRKEKVTIQDWFREADFAKEVRNYKATKDEKI 854
>gi|38046598|gb|AAR09165.1| leukotoxin structural protein [Mannheimia ruminalis]
Length = 953
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSN 812
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 6/108 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE 322
+D + G N++ G+D+F G D +
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSN 812
>gi|323492605|ref|ZP_08097749.1| hypothetical protein VIBR0546_00005 [Vibrio brasiliensis LMG 20546]
gi|323312980|gb|EGA66100.1| hypothetical protein VIBR0546_00005 [Vibrio brasiliensis LMG 20546]
Length = 2379
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 10/158 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKN 259
NI + FI + D G + L E +S G N
Sbjct: 2171 NIDYDNQNEAVERFINADINGSTTTTADDMTYGNEDYHHKL--EGYSDAGVDIVQSGGGN 2228
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ ++ + G +G+D++ G + N+ SGND G G D + ++
Sbjct: 2229 DTVYGEEGVDLIFGGTGHDILDGGTGNDAVRGGSGNDTIIGGQGNDILVGDDGADIFTWL 2288
Query: 320 RF---ENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ ++ D ++ + D + E D+ +D +
Sbjct: 2289 DGDLDGSTDVIKDFDKAEGDKIDLSELFEGDDRTVDEI 2326
>gi|115758054|ref|XP_792649.2| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
gi|115965029|ref|XP_001193437.1| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
Length = 562
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 62/204 (30%), Gaps = 56/204 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS----- 77
W + I Y T +++L + + A WS V L F E H
Sbjct: 174 WDSSQITYSLVNFPTRGG-IKLSDL----RNTIKRAFEVWSDVTPLVFTELHGHEVNQAM 228
Query: 78 -DIKFI----------------SSNNGYVCTPRYDSR-YFMEINFDKADVWRYGIG-KGT 118
I F+ + + + +P+ +I+FD DV+ G +G
Sbjct: 229 VRIAFMKGRHSHDLEHPIFDGPNGDLAHAFSPKSGWGEVNGDIHFDDDDVFTLGNNDRGY 288
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
A HEIGHALGL H +M + M D
Sbjct: 289 NFFQTAAHEIGHALGLDHSNDPEA-------------------LM--WPHYHFMRDFE-- 325
Query: 179 YCATPMVSDIVAVQKIYGAPKGSL 202
DI VQ +YG
Sbjct: 326 ----LPDDDIRGVQALYGTKTSPR 345
>gi|78188507|ref|YP_378845.1| hypothetical protein Cag_0529 [Chlorobium chlorochromatii CaD3]
gi|78170706|gb|ABB27802.1| hypothetical protein Cag_0529 [Chlorobium chlorochromatii CaD3]
Length = 4697
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/353 (17%), Positives = 102/353 (28%), Gaps = 83/353 (23%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L + + + + S + + + +DL+ + + F H+ +G E
Sbjct: 15 LRGFNSVYYLGVKLAQLQATPSSGWDSSKTIDDLLTTLKAEGFTPETHYMRYGYRENLAP 74
Query: 398 T--FDSYLYLGS-----------YDDLRNVFGSDR----GAAARHYITHGVKEGRNP-DA 439
F++ Y+ + Y + + G +HY+ +G E NP +A
Sbjct: 75 NAFFNAAEYIQAKANQLVTVDHRYASVEAAKAAFLAAWDGDVYQHYLRYGAAENVNPSNA 134
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
F Y A L A A L S DL+ F
Sbjct: 135 FDESAYYA----LKLAALRADPLTSAEWTP--------------------KSVADLQRYF 170
Query: 500 GSDRGAAARHYITHGVKEG---------RNPDAFKALEYIA--SHEDLINAFADAPDLVQ 548
+ A HY +G EG P F EY +++ + D+ D +
Sbjct: 171 KNAGFTALTHYEAYGKAEGIVVTPVLSSLTPSLFNPTEYTQAKANQLFLQHAYDSVDAAK 230
Query: 549 AG---------KDHFSNFGYEE--GRSITFNPDLYLT-------------------SYDD 578
H+ +G E S F+ Y S D
Sbjct: 231 TAFLKAWNQNVYQHYLQYGAAENVNPSNAFDESAYYALKLAALRADPLTTVEWTSKSVAD 290
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
L F + A HY +G EG + + K L + D A
Sbjct: 291 LQRYFKNAGFTALTHYEAYGKAEGIVVTPVPVGEKVADTLFAVTIDGAATPTV 343
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 8/149 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES--VVGSSGNDVVIG 282
GD + T G T + + G + A T + + +GND +I
Sbjct: 4482 GAGDQTITTTSTGNATVNATCTTGTQRIVTGVGNDSVTAHSTTASNNVITTDAGNDTIIA 4541
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS--D 340
N+ G+D G G DTF + A + + I+ D N D L+
Sbjct: 4542 GQGNDSITGGLGSDSMTGGGGTDTFVFGANGSI----VGASMDIITDFNNAGADILTFGG 4597
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYE 369
+ AD + ++ +++
Sbjct: 4598 NTTVLAADASVLVAGTNVQTSDGGLITFD 4626
>gi|27805999|ref|NP_776814.1| collagenase 3 precursor [Bos taurus]
gi|8469207|sp|O77656|MMP13_BOVIN RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|3264824|gb|AAC24596.1| matrix metalloproteinase 13 [Bos taurus]
Length = 471
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 65/187 (34%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F + +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDLTHSEV-------EKAFRKAFKVWSDVTPLNFTRIHNGTA 161
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D D +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGD--EDPYSKHP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|304393739|ref|ZP_07375667.1| bifunctional hemolysin/adenylate cyclase [Ahrensia sp. R2A130]
gi|303294746|gb|EFL89118.1| bifunctional hemolysin/adenylate cyclase [Ahrensia sp. R2A130]
Length = 940
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 8/144 (5%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ +Y K +Y + G D L + L+G + + + G
Sbjct: 57 DVVYGGAGNDTIKGDGGNDALYGNQGKDRLYGDAGNDALLGMEGDDRLYGGSGYDGLDGG 116
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + + ++G +GND + G+S ++ + GND G +G D F + S
Sbjct: 117 SGNDRLYGGNDSDLLIGGTGNDHLYGDSGDDALYGGEGNDRLYGGTGNDWLFAGSGSDQV 176
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
N ++V+ A+E+ D ++
Sbjct: 177 D-GDSGNDVVVHVASENDADGNTN 199
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 7/133 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I + N + +++ G GND + GN + + +GND G G D + +
Sbjct: 50 ISARDGNDVVYGGAGNDTIKGDGGNDALYGNQGKDRLYGDAGNDALLGMEGDDRLYGGSG 109
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + D L + D D++ + + Y + D
Sbjct: 110 YDGLDGGSGNDRLY----GGNDSDLLIGGTGNDHLYGDSGDDALYGGEGNDRLYGGTGND 165
Query: 371 -LIQVIGQDVFES 382
L G D +
Sbjct: 166 WLFAGSGSDQVDG 178
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 33/126 (26%), Gaps = 5/126 (3%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G K I+ + V G +GND + G+ N+ + + G D G +G D
Sbjct: 43 GSTKGDRISARDGNDVVYGGAGNDTIKGDGGNDALYGNQGKDRLYGDAGNDALLGMEGDD 102
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS--VNVKQRSILEYTASYEDLI 372
+ D + + L + L
Sbjct: 103 R---LYGGSGYDGLDGGSGNDRLYGGNDSDLLIGGTGNDHLYGDSGDDALYGGEGNDRLY 159
Query: 373 QVIGQD 378
G D
Sbjct: 160 GGTGND 165
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++V+ ++G+DV+IG++ + GNDV G +G DT + + N
Sbjct: 30 VKNVI-TNGDDVLIGSTKGDRISARDGNDVVYGGAGNDTIKGDGGNDAL----YGNQGKD 84
Query: 328 YDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ D L +E + D ++ + Y + DL
Sbjct: 85 RLYGDAGNDALLGMEGDDRLYGGSGYDGLDGGSGNDRLYGGNDSDL 130
>gi|298369366|ref|ZP_06980684.1| calcium-binding hemolysin protein [Neisseria sp. oral taxon 014
str. F0314]
gi|298283369|gb|EFI24856.1| calcium-binding hemolysin protein [Neisseria sp. oral taxon 014
str. F0314]
Length = 961
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 10/118 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
++ G + + + + + N + + + G GND + G +++ +
Sbjct: 392 NIYGAGNNADNLLVGNAGRNRLYSGRGNDIVDGGAGNDHINGGDGNDRLYGGKGDDIIYG 451
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+GNDV DG +G D + + Y ++D D SD +RF D+
Sbjct: 452 GAGNDVLDGGTGKDRLYGGKGNDTY----------LFDGQTTVIDEASDRNTVRFDDK 499
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 52/153 (33%), Gaps = 10/153 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I +++ G +GND +IG N+ G+D G G DT
Sbjct: 287 INGTDGRDVIDGGVGNDTLNGYAGNDELIGGDGNDTLNGGDGHDKLWGDQGQDTMRGGVG 346
Query: 313 SYLYKIYRFENAII------VYDANEHKQDFL-SDVERL-RFADQCIDSVNVKQRSILEY 364
+ YK+ + +I + N L ++VE L + I ++L
Sbjct: 347 NDTYKVDDIGDTVIENPGEGIDSVNSSISYTLPANVENLELLGEANIYGAGNNADNLLVG 406
Query: 365 TASYEDLIQVIGQDVFESMK--HFYEFGLSEGR 395
A L G D+ + G R
Sbjct: 407 NAGRNRLYSGRGNDIVDGGAGNDHINGGDGNDR 439
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 29/153 (18%)
Query: 191 VQKIYG----APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
Q IYG A GN+ Y + T+Y GG+D
Sbjct: 78 TQNIYGLGNNADNTLTGNDGYN---RLNGGRGNDTVYGMGGED----------------- 117
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+I G E N + +SV G G+D + G + +++ GND+ G G DT
Sbjct: 118 -----NISGGEGNDKLYGGEGKDSVNGDEGDDRLYGGNGDDILNGGKGNDILQGDMGEDT 172
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F + A S I + V + + D +S
Sbjct: 173 FVFNADSGHDTIIDNQGNNTVRFGSGIRADKIS 205
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 66/179 (36%), Gaps = 9/179 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + +++Y + G+D L T +YID ++ ++ G + + I +H+ +
Sbjct: 558 FQKAVSGGHYGKSLYGTSGNDTLRGT---ADDDYIDGGSDGRDTLYGGDGDDLIVEHSAL 614
Query: 269 ------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +GND + +S +++ +GND +G DT+ + I+ F
Sbjct: 615 ILGVPDDKLYGGNGNDRLYADSGDDLLDGGAGNDYLEGGLHKDTYIFGRGYGHDTIFDFM 674
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + L D I + + Y D + D
Sbjct: 675 FDLDDEYTPFIHTNTVKFTGGLTLDDLSISVTRGYGKEGIGYMPHLNDFVTTPRTDGDT 733
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 32/83 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + G G+D++ G + N+V +G D G G DT+ +
Sbjct: 422 VDGGAGNDHINGGDGNDRLYGGKGDDIIYGGAGNDVLDGGTGKDRLYGGKGNDTYLFDGQ 481
Query: 313 SYLYKIYRFENAIIVYDANEHKQ 335
+ + N + D +
Sbjct: 482 TTVIDEASDRNTVRFDDKIDIGT 504
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 25/201 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIGGYE 257
G+ +++Y + + + +GG D + + + V N +L +I G
Sbjct: 31 GTAADDVYYV--TGSTDKINEAV--NGGTDSV-YSNVSYVLPNNVENLTLTGTQNIYGLG 85
Query: 258 KNM--TIAQHTVIESVVGSSGNDVVIG---------NSANNVFFESSGNDVFDGSSGLDT 306
N T+ + + G GND V G N+ + G D +G G D
Sbjct: 86 NNADNTLTGNDGYNRLNGGRGNDTVYGMGGEDNISGGEGNDKLYGGEGKDSVNGDEGDDR 145
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ I + + + F+ + + + N ++ +
Sbjct: 146 LYGGNGDD---ILNGGKGNDILQGDMGEDTFVFNAD----SGHDTIIDNQGNNTVRFGSG 198
Query: 367 SYEDLIQVIGQDVFESMKHFY 387
D I + +
Sbjct: 199 IRADKISIAQTTNVSGNTDWV 219
>gi|330806881|ref|YP_004351343.1| hypothetical protein PSEBR_a206 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327374989|gb|AEA66339.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 4412
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 1/142 (0%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D+ +T V YI + ++ G ++ N T+ + + G GND + G
Sbjct: 4219 NGVDVSKVT-TSNVHQYITEHYTAFDVSGAHDGNDTLLGGAGNDIIFGQGGNDTLDGGKG 4277
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N++ +GND G G DT + + V + + D+ L
Sbjct: 4278 NDILLGGTGNDTLIGGQGNDTLIGGLGGDTFVWKAGDTGTDVIKDFKASEGDRIDLRDLL 4337
Query: 346 FADQCIDSVNVKQRSILEYTAS 367
+ + + S ++ +S
Sbjct: 4338 QGESGSTIDHFLKISTVDGVSS 4359
>gi|300867244|ref|ZP_07111904.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Oscillatoria
sp. PCC 6506]
gi|300334721|emb|CBN57070.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Oscillatoria
sp. PCC 6506]
Length = 445
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
+ S I + G+D L + GG L + G N ++ +
Sbjct: 249 NDRVTGSSVSDVINGNQGNDTL--SGEGGDDY---LRGGKDDDSLSGGVGNDILSGNQAN 303
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G +G+D + G N+V GND+ G G DT + + + E +
Sbjct: 304 DSLDGGAGDDFLRGGRGNDVLTGGDGNDILIGDLGNDTLTGGGGADTFVLILGEGLTLDT 363
Query: 329 DANE 332
+
Sbjct: 364 TTDR 367
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 11/161 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS----------IGGYEKNMTIAQHTVIESVVGSSG 276
G D + LT+ +N + + + I G + N T++ + + G
Sbjct: 225 GTDTVQLTVQDSQQNTSGIQAGAGNDRVTGSSVSDVINGNQGNDTLSGEGGDDYLRGGKD 284
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + G N++ + ND DG +G D + + N I++ D
Sbjct: 285 DDSLSGGVGNDILSGNQANDSLDGGAGDDFLRGGRGNDVLTGGD-GNDILIGDLGNDTLT 343
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ +++ IL++ D I V G
Sbjct: 344 GGGGADTFVLILGEGLTLDTTTDRILDFNPGEGDRIGVTGN 384
>gi|281183314|ref|NP_001162305.1| matrix metalloproteinase-26 [Papio anubis]
gi|160904139|gb|ABX52125.1| matrix metallopeptidase 26 (predicted) [Papio anubis]
Length = 261
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 65/192 (33%), Gaps = 55/192 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKF 81
W+ Y + Y+ + ++ A+ WS V L F++ +DIK
Sbjct: 99 WNKYTLTYRIINYPHDMKPSTV-------KDSIYNAVSIWSNVTPLIFQQVQNEDADIKI 151
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ P +S ++FDK + W G L A HEI
Sbjct: 152 SFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWS-TSNTGYNLFLVATHEI 210
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMV- 185
GH+LGL H G+ +S+M +Y+ + T +
Sbjct: 211 GHSLGLQHSGN-------------------QSSIMYPTYW----------YHDPGTFQLS 241
Query: 186 -SDIVAVQKIYG 196
DI +Q +YG
Sbjct: 242 ADDIQRIQHLYG 253
>gi|77456361|ref|YP_345866.1| von Willebrand factor, type A [Pseudomonas fluorescens Pf0-1]
gi|77380364|gb|ABA71877.1| Large adhesive protein [Pseudomonas fluorescens Pf0-1]
Length = 5218
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 1/141 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+ +T V YI + +++ G ++ N T+ + + GS GND++ G N
Sbjct: 5026 GVDVSKVT-TSNVHQYITEHYQAFDVSGAHDGNDTLLGGAGNDILFGSGGNDLLDGGKGN 5084
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ +GND G G D + + + + V + + D+ L
Sbjct: 5085 DILLGGTGNDTLIGGQGNDILIGGSGADTFVWKAGDTGNDVIKDFKASEGDRIDLRDLLQ 5144
Query: 347 ADQCIDSVNVKQRSILEYTAS 367
+ N + + ++ +S
Sbjct: 5145 GETGSTIDNFLKITTVDGVSS 5165
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D G + TL+GG N I + + G + N + T ++++G GND++IG
Sbjct: 5048 FDVSGAHDGNDTLLGGAGNDILFGSGGNDLLDGGKGNDILLGGTGNDTLIGGQGNDILIG 5107
Query: 283 NSANNVFF---ESSGNDVF 298
S + F +GNDV
Sbjct: 5108 GSGADTFVWKAGDTGNDVI 5126
Score = 38.2 bits (87), Expect = 4.2, Method: Composition-based stats.
Identities = 52/357 (14%), Positives = 99/357 (27%), Gaps = 48/357 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTI------YDSGGD-----------DLLDLTLIGG 238
G+ + ++ + + + +QT+ ++S G L +
Sbjct: 4860 GSSFATYIDSTHYLSISTSGEVVLQTLKNNNWSWNSLGTIHAQGDGTYEISSLAGSGNST 4919
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIA--QHTVIESVVGSSGNDVVIGN----SANNVFFES 292
N D + ++ + G I + + + N N
Sbjct: 4920 SSNTTDNSAAGFALLSGLSNVEAIGLNNGVSLNDLKPYDSDKTPQTNIDPKDLANSIIGH 4979
Query: 293 S-----GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ GND G G D F S+ A+ + A E D
Sbjct: 4980 TEATMPGNDTVSGGDGNDILFGDLVSFNGIAGEGYQAMQAFVAKETGVDVSK---VTTSN 5036
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYL 405
+ + + + + L+ G D+ + G +G DI
Sbjct: 5037 VHQYITEHYQAFDVSGAHDGNDTLLGGAGNDILFGSGGNDLLDGG--KGNDILLGGTG-- 5092
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
D L G+D T K G + ++ AS D I+
Sbjct: 5093 --NDTLIGGQGNDILIGGSGADTFVWKAG-DTGNDVIKDFKASEGDRIDLRDLLQGETGS 5149
Query: 466 GKDHFSNFGCEEGRFV-------TFDSYLYLGSYDDL-RNVFGSDRGAAARHYITHG 514
D+F +G F+S + D+ + G++ +A H + G
Sbjct: 5150 TIDNFLKITTVDGVSSLQVSSGGKFNSGDAAAATPDVTIKLEGNNWSSANIHNLIAG 5206
>gi|163732897|ref|ZP_02140342.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och
149]
gi|161394257|gb|EDQ18581.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och
149]
Length = 570
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G DLLDL+ +DL + + G + I E+V G+ ND + GN
Sbjct: 421 GDGVDLLDLS-DAASAVTVDLAAGTITD--GANTSTAINF----ENVTGTDFNDTITGND 473
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+NV +GNDV G +G DTF ++ I
Sbjct: 474 QDNVIRGGAGNDVMSGGAGADTFVFFEEDAGVDI 507
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 1/127 (0%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I + ++GS GND + GN +++ F GND G G DT F +
Sbjct: 32 FSNGLDIKGSDKSDLIIGSFGNDTIAGNGGDDLMFGLFGNDKMSGGLGDDTIFAGGGHDI 91
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQV 374
+ E+A+ + N+ D + + + N ++ + Y+ +
Sbjct: 92 VEGGEGEDALYGNNGNDVIVGNRGDDKMFGGSGNDKLVWNNGDGSDLMNGGSGYDKVQVN 151
Query: 375 IGQDVFE 381
D+ +
Sbjct: 152 FNTDLVD 158
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 29/195 (14%)
Query: 224 DSGGDDLLDLTLIGGVKNYI------DLNTESWSS--IGGYEKNMTI---AQHTVIE--- 269
D G D DL + + I DL + + + G + TI H ++E
Sbjct: 37 DIKGSDKSDLIIGSFGNDTIAGNGGDDLMFGLFGNDKMSGGLGDDTIFAGGGHDIVEGGE 96
Query: 270 ---SVVGSSGNDVVIGNSANNVFFESSGN-----------DVFDGSSGLDTFFYYAPSYL 315
++ G++GNDV++GN ++ F SGN D+ +G SG D + L
Sbjct: 97 GEDALYGNNGNDVIVGNRGDDKMFGGSGNDKLVWNNGDGSDLMNGGSGYDKVQVNFNTDL 156
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ ++ + F E +++ + +++++ +LE D VI
Sbjct: 157 VDNDLQNKDVAEFETTDTGVQFAR-TEVNDQSERGLFQLDIRETEVLETNFGGGDDTAVI 215
Query: 376 GQDVFESMKHFYEFG 390
DV E + + G
Sbjct: 216 KGDVLEQIALNLDGG 230
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 21/135 (15%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ G D LDL+ + +DL + E+V+G+
Sbjct: 223 IALNLDGGDGVDTLDLSQV-DAGIKVDLAAGKLAHSKAEN----------FENVIGTEYK 271
Query: 278 DVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
D++ G++ +NV G+D G+ G D F L I+ + +
Sbjct: 272 DLLRGDAQDNVISGLGGDDQLGGRGGDDTLIGNKGDDKVFGGDGDDLL-IWNNGDGSDLM 330
Query: 329 DANEHKQDFLSDVER 343
+ +
Sbjct: 331 HGGNGYDRLQVNFDT 345
>gi|196234066|ref|ZP_03132901.1| Hemolysin-type calcium-binding region [Chthoniobacter flavus
Ellin428]
gi|196221915|gb|EDY16450.1| Hemolysin-type calcium-binding region [Chthoniobacter flavus
Ellin428]
Length = 898
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 5/124 (4%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S TI + +D +D + ++L S G + T I++++GS
Sbjct: 164 ASAGADTIVGNSTNDTVDYSN-STAGVTVNLTVNPQVSGGYASGDTL----TGIDNILGS 218
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ ND + G+S N+ GND G G DTF + + + + +
Sbjct: 219 TFNDTLTGSSGANILIGGQGNDTLSGGGGNDTFKWMSGDGGTTATPAVDTVSDFSNVAGN 278
Query: 335 QDFL 338
D +
Sbjct: 279 TDRI 282
>gi|300794469|ref|NP_001178363.1| matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
gi|297485306|ref|XP_002694844.1| PREDICTED: matrix metallopeptidase 15 (membrane-inserted) [Bos
taurus]
gi|296478084|gb|DAA20199.1| matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
Length = 675
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 65/209 (31%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + E R A W + L F+E
Sbjct: 132 YALTGRKWNNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPY 184
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 185 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 244
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + +M+ F
Sbjct: 245 STDLHGNSLFLVAVHELGHALGLEHSSNPSA-------------------IMAPFYQWMD 285
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + D+ +Q++YG P G
Sbjct: 286 IDNFQ------LPEDDLRGIQQLYGTPDG 308
>gi|15146408|gb|AAK84651.1|AF205359_1 RTX toxin [Moraxella bovis]
gi|149774821|gb|ABR28451.1| cytotoxin [Moraxella bovis]
gi|149774823|gb|ABR28452.1| cytotoxin [Moraxella bovis]
gi|149774825|gb|ABR28453.1| cytotoxin [Moraxella bovis Epp63]
gi|149774827|gb|ABR28454.1| cytotoxin [Moraxella bovis]
gi|149774829|gb|ABR28455.1| cytotoxin [Moraxella bovis]
gi|149774831|gb|ABR28456.1| cytotoxin [Moraxella bovis]
gi|149774833|gb|ABR28457.1| cytotoxin [Moraxella bovis]
gi|149774835|gb|ABR28458.1| cytotoxin [Moraxella bovis]
gi|149774837|gb|ABR28459.1| cytotoxin [Moraxella bovis]
Length = 927
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N + + G +G+D + G N+ G+D+ DG SG D A
Sbjct: 700 FKGSKFNDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNGGAG 759
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ +Y + + +YD + ++L FAD I + ++
Sbjct: 760 NDVYIFRKGDGNDTLYDG--------TGNDKLAFADANISDIMIE 796
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 16/131 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ K S F + GDDLLD G + + G + N ++
Sbjct: 695 QFNDVFKGSKFNDIFHSGEGDDLLDG---GAGDDR----------LFGGKGNDRLSGDEG 741
Query: 268 IESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
+ + G SG+DV+ G + N+V F + GND +G D F A I R +
Sbjct: 742 DDLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANISDIMIERTKEG 801
Query: 325 IIVYDANEHKQ 335
IIV +
Sbjct: 802 IIVKRNDHSGS 812
>gi|83311100|ref|YP_421364.1| Type V secretory pathway, adhesin AidA [Magnetospirillum magneticum
AMB-1]
gi|82945941|dbj|BAE50805.1| Type V secretory pathway, adhesin AidA [Magnetospirillum magneticum
AMB-1]
Length = 3730
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 204 NNIYKIEVQQKDS-PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
++ Y I++I G+D++DLT + +I G N +
Sbjct: 1123 DDGYSGSPTGGARIDGIESIVAGEGNDVVDLTSSKYTYGDV--------TIDGGAGNDVL 1174
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G +GNDV+ G S N+ G D DG G DT A + L I +
Sbjct: 1175 MGNAGNDVIDGGTGNDVLYGASGNDTLRGGDGADTLDGGYGADTIDAGAGNDLGIIKGGQ 1234
Query: 323 NAIIVYDANEHKQDFLSD 340
+A YD D
Sbjct: 1235 SAGDNYDGGTGTDTLRID 1252
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 67/197 (34%), Gaps = 16/197 (8%)
Query: 200 GSLGNNI----YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-----NYIDLNTES- 249
G++I Y + T+ + G+D + L + ++I L
Sbjct: 3510 AGTGDSIDIAGYNRHDESYRGSGGDTLIGAAGNDYMSLEGGDHAQKISGIDHIQLGDGDN 3569
Query: 250 ----WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ ++T+A + + + +SG+D+++ + N +GND +G D
Sbjct: 3570 VILDMTTTRYDYGDLTVAGGSGHDVIWSASGDDLLVAGNGGNTIHGGAGNDTIVAGAGSD 3629
Query: 306 TFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILE 363
+ + + + + A + D + + A+ I + + ++
Sbjct: 3630 ELMGQEGNDTFLFDFGSGHDTVNGGAGTNWTDTIDLSTDMHAGANITITTADNHSWTVAS 3689
Query: 364 YTASYEDLIQVIGQDVF 380
+GQD
Sbjct: 3690 DGDHNATGNIELGQDKS 3706
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 59/191 (30%), Gaps = 23/191 (12%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
++ D G + D+ +V +L + V K S + +D G
Sbjct: 748 TYTVSDGHGGTTSGSASFDVTSVNDGPTTSDVTLASGTEDRSVTIKASDLLGNAHDVDG- 806
Query: 229 DLLDLTLIGGVKNYI-DLNTES--------WSSIGGYEKNMTIAQH------------TV 267
D L ++ + I D + + +S ++ Q V
Sbjct: 807 DTLSVSNLSASNGTITDNHDGTYTFTPNHDFSGNVDLSYTVSDGQGGSTAGTAHFGMAAV 866
Query: 268 IESVVGSSGNDVVIGNSA-NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+S V S+ N V + ++GND G SG D + + + +
Sbjct: 867 ADSPVLSASNITVDLGAGQAQTLNGTTGNDTLSGGSGNDVVNGSSGDDVLYGDGTGSVTV 926
Query: 327 VYDANEHKQDF 337
+ ++ D
Sbjct: 927 PLNISDRLSDT 937
>gi|149774839|gb|ABR28460.1| cytotoxin [Moraxella bovis]
gi|149774841|gb|ABR28461.1| cytotoxin [Moraxella bovis]
Length = 927
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N + + G +G+D + G N+ G+D+ DG SG D A
Sbjct: 700 FKGSKFNDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNGGAG 759
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ +Y + + +YD + ++L FAD I + ++
Sbjct: 760 NDVYIFRKGDGNDTLYDG--------TGNDKLAFADANISDIMIE 796
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 16/131 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ K S F + GDDLLD G + + G + N ++
Sbjct: 695 QFNDVFKGSKFNDIFHSGEGDDLLDG---GAGDDR----------LFGGKGNDRLSGDEG 741
Query: 268 IESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
+ + G SG+DV+ G + N+V F + GND +G D F A I R +
Sbjct: 742 DDLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANISDIMIERTKEG 801
Query: 325 IIVYDANEHKQ 335
IIV +
Sbjct: 802 IIVKRNDHSGS 812
>gi|85703935|ref|ZP_01035038.1| hypothetical protein ROS217_13091 [Roseovarius sp. 217]
gi|85671255|gb|EAQ26113.1| hypothetical protein ROS217_13091 [Roseovarius sp. 217]
Length = 1030
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 46/140 (32%), Gaps = 2/140 (1%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + SGG+ ++ G N I IGG TI
Sbjct: 824 DTVMGGNGNDVVAGGAGNDTLSGGEGNDSMSGSFGDDNII--AGGGADDIGGGTGRDTID 881
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ V G GND + G N+ +DV DG +G DT A + +
Sbjct: 882 AGAGNDRVGGGEGNDSIFGGDGNDFLAGGGRDDVIDGGAGNDTINAGAGNDQITGGAGAD 941
Query: 324 AIIVYDANEHKQDFLSDVER 343
+ + D ++D E
Sbjct: 942 QFVFSAFTAGEADVITDFED 961
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 47/145 (32%), Gaps = 1/145 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + N I + + G G D V G + ++ G+D G+ G D +
Sbjct: 735 SLVGGDGNDVIRGLGGNDDISGGLGFDSVFGEAGDDTLSGGDGDDALAGADGNDIVNGGS 794
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ I D ++ + + + + L + +
Sbjct: 795 GNDNIGGGQGDDTIDGDDGDDIIGAGFGN-DTVMGGNGNDVVAGGAGNDTLSGGEGNDSM 853
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRD 396
G D + + G GRD
Sbjct: 854 SGSFGDDNIIAGGGADDIGGGTGRD 878
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 57/219 (26%), Gaps = 44/219 (20%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + +P ++ G+D++ D++ G + ++ G + +
Sbjct: 722 DLGLDLSGTPGADSLVGGDGNDVIRGLGGNDDISGGLGFDSVF--GEAGDDTLSGGDGDD 779
Query: 261 TIAQHTVIESVVGSSGNDVVI-------------------GNSANNVFF--------ESS 293
+A + V G SGND + G + V +
Sbjct: 780 ALAGADGNDIVNGGSGNDNIGGGQGDDTIDGDDGDDIIGAGFGNDTVMGGNGNDVVAGGA 839
Query: 294 GNDVFDGSSGLDTFFYYAPSYL--------YKIYRFENAIIVYDANEHKQDFLSDVERLR 345
GND G G D+ I A + + +
Sbjct: 840 GNDTLSGGEGNDSMSGSFGDDNIIAGGGADDIGGGTGRDTIDAGAGNDRVGGGEGNDSIF 899
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + +++ A + + G D
Sbjct: 900 GGDGNDFLAGGGRDDVIDGGAGNDTINAGAGNDQITGGA 938
>gi|327279309|ref|XP_003224399.1| PREDICTED: matrix metalloproteinase-23-like [Anolis carolinensis]
Length = 612
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 61/203 (30%), Gaps = 60/203 (29%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--S 77
W + + YK + D + +A A WS V L+F + +
Sbjct: 262 GYKWDHVNLTYKIVQFPSTLNKGD------TERAIA-SAFRMWSDVSPLSFRRLAPTQQA 314
Query: 78 DIKFISSNNGYV------CTPRYDSRYF----------MEINFDKADVWRYGIGK----- 116
DI + P +D EI+FD + W +G +
Sbjct: 315 DITIGFYTFNHTDCWFSPLHPCFDGLNGELAHAFLPPRGEIHFDNHEFWIFGRSRFSWKQ 374
Query: 117 ---GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
L A HEIGHALGL H + + Y ++
Sbjct: 375 GVWLNDLVQVAAHEIGHALGLWHSRDVRA---LMHPNATYSR-TWQI------------- 417
Query: 174 DASFGYCATPMVSDIVAVQKIYG 196
DI A+Q++YG
Sbjct: 418 ----------GQDDIWAIQRLYG 430
>gi|327269116|ref|XP_003219341.1| PREDICTED: interstitial collagenase-like [Anolis carolinensis]
Length = 465
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 70/232 (30%), Gaps = 51/232 (21%)
Query: 10 TERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+ D +L D W I Y+ T D+ + A WSK
Sbjct: 92 VPDLGDFVLTDGNPKWKKNNITYRIVNYTPDMHPSDVDK-------AIEKAFEVWSKASP 144
Query: 68 LTFEETSIH-SDIKFIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYG 113
LTF+ +DI N+ + Y + F +++FD+ ++W
Sbjct: 145 LTFKRLYDGIADIMMSFEIRDHGDNSPFDGPNNYLAHAFSPGDNIGGDVHFDEDELWTTK 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+G L A HE+GH+LGL H + S SY P +
Sbjct: 205 GSRGYNLFLVAAHELGHSLGLFHSTDPGA---------------LMYSEYSYTAPNLFQL 249
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTI 222
DI +Q IYG G + T+
Sbjct: 250 PQ----------DDINGIQAIYGKANSKVQPTGPTTPTACDPSTTFDAVTTL 291
>gi|115523034|ref|YP_779945.1| RTX toxins and related Ca2+-binding proteins-like protein
[Rhodopseudomonas palustris BisA53]
gi|115516981|gb|ABJ04965.1| RTX toxins and related Ca2+-binding proteins-like protein
[Rhodopseudomonas palustris BisA53]
Length = 734
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 52/165 (31%), Gaps = 15/165 (9%)
Query: 219 IQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVV 272
TI S GDD +D + GG+ N + S S I N + + V
Sbjct: 317 ADTIDGSAGDDNIDAREGDDVIFGGIGND-TIIAGSGSDIVYAGPGNDIVFAGAGNDIVF 375
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G SGND + G N+ F G+D G +G D + L ++
Sbjct: 376 GGSGNDRLFGEDGNDSLFGEDGDDQLFGGAGNDVLMGGIGNDLLS----GGLGDDVLSDG 431
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
D + E D + + L + L +
Sbjct: 432 EGSDTVRGDE----GDDYVVAAADGAPDDLSGGDGLDTLDYSAAR 472
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 10/128 (7%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +++ GS+G+D + ++V F GND SG D + +
Sbjct: 304 GTVGDDNLLGTHCADTIDGSAGDDNIDAREGDDVIFGGIGNDTIIAGSGSDIVYAGPGND 363
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ IV+ S +RL D L A + L+
Sbjct: 364 I--VFAGAGNDIVFGG--------SGNDRLFGEDGNDSLFGEDGDDQLFGGAGNDVLMGG 413
Query: 375 IGQDVFES 382
IG D+
Sbjct: 414 IGNDLLSG 421
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 35/177 (19%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D LD + I +N ++ G N ++ E+++G SGND +
Sbjct: 456 DLSGGDGLDTLDYSAARLSIHVNFAEGTAEGEEIGNDSVEG---FEAIIGGSGNDKLTAG 512
Query: 284 SANNVFFESSGNDVF-----------------------------DGSSGLDTFFYYAPSY 314
+ +G+D+ G SG DT Y + +
Sbjct: 513 LESVSMHGGAGDDLISDGSGADTVDAGDDDDCVVAAMDGTDDRYSGGSGRDTLDYSSATL 572
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ E + + E +D L++ E + D + +
Sbjct: 573 SITVDLGEGSA---EGIEIGRDLLAEFEEIIGGDGNDHFIGGSNSVAFTGGGGDDTF 626
>gi|110680257|ref|YP_683264.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
gi|109456373|gb|ABG32578.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
Length = 2666
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
GGDD L GG + DL S++ + G + + +T ++++ G +GND++ G
Sbjct: 2459 GGGDDTL----WGGDGD--DLMFGSFNDDVLYGGAGDDVLNGNTQVDALFGEAGNDILRG 2512
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV---YDANEHKQDFLS 339
+ +GND +G +G D + + + + + D+ D +
Sbjct: 2513 GDGFDSLDGGTGNDTLEGGNGKDVLNGGSGQDILRGQAQNDTFVFAEASDSAFGSADLID 2572
Query: 340 DVE 342
E
Sbjct: 2573 GFE 2575
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E + T++ + + + G GND + G + +++ F +G+D DG +G D
Sbjct: 2312 ILGLEGDDTLSGGSGNDRLNGGDGNDAIEGGAGDDILFGKAGDDTLDGGAGDDELIGSDG 2371
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + + N+ + D D+ I + V +
Sbjct: 2372 NDEINGEAGNDILRGGAGNDVIEGGAGDDTVFGGNDEDIINGGVGDDML 2420
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 57/169 (33%), Gaps = 34/169 (20%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG----------VKNYIDL 245
GA + ++ ++ + D ++ G D LDL G + +DL
Sbjct: 1488 GASRATVTGDVDGAGNTRVDWGSF--LWGGAGIDTLDLRFDRGLNFLPTDGPEARAIVDL 1545
Query: 246 NTESWSSIGGYEKNMTIAQHT----------------------VIESVVGSSGNDVVIGN 283
+ ++ + T IE+V+G++ ND++ G+
Sbjct: 1546 DAAPTNTTINTFTGERVVYGTAVFTNPGEDETAPGSYVNATLFGIENVLGTANNDIISGD 1605
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ +N G D DG G DT Y S ++ + V N
Sbjct: 1606 ARDNRIEGGGGADTMDGRGGTDTASYALASEGVELNLVRDGAGVRLDNS 1654
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG + T+ H + + G G D ++G ++ SGND +G G D A
Sbjct: 2285 LGGLGTDDTVIGHDGNDQLFGFGGKDRILGLEGDDTLSGGSGNDRLNGGDGNDAIEGGAG 2344
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ F A D L +D + IL A + +
Sbjct: 2345 DDIL----FGKAGDDTLDGGAGDDELIG------SDGNDEINGEAGNDILRGGAGNDVIE 2394
Query: 373 QVIGQD 378
G D
Sbjct: 2395 GGAGDD 2400
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 66/221 (29%), Gaps = 40/221 (18%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ S G+D ++ G N I L + + I G + T+ + + G G+D++
Sbjct: 2366 LIGSDGNDEIN----GEAGNDI-LRGGAGNDVIEGGAGDDTVFGGNDEDIINGGVGDDML 2420
Query: 281 IGNSANNV---------------------------FFESSGNDVFDGSSGLDTFFYYAPS 313
GN +++ G+D G G D F
Sbjct: 2421 GGNGGSDIINGGSGDDMLIGGLDGDVLDGGDGADELRGGGGDDTLWGGDGDDLMFGSFND 2480
Query: 314 YLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ A + D L + + LR D LE +
Sbjct: 2481 D----VLYGGAGDDVLNGNTQVDALFGEAGNDILRGGDGFDSLDGGTGNDTLEGGNGKDV 2536
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
L GQD+ F +E D F S + ++ +
Sbjct: 2537 LNGGSGQDILRGQAQNDTFVFAEASDSAFGSADLIDGFEGV 2577
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 66/177 (37%), Gaps = 25/177 (14%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK--NMTIAQHT-----------V 267
T+ G D L + + +DL + + N+T T
Sbjct: 1015 TLLGGAGTDTLVASGV------VDLQAGTGPDGVTFSGFENITRVSGTFGTLLGDDGANR 1068
Query: 268 IESVVGSS------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
++ G G D+++G + N+V G DV DG +GLDT Y + I
Sbjct: 1069 LQDSAGDGFLAGRGGADILLGEAGNDVLIGGLGADVLDGGAGLDTASYADSTTSIFIREV 1128
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A ++ E + D L D+ER+ + ++ I+E A + ++ G D
Sbjct: 1129 PGAQMLGFRGEAQGDVLIDIERIEGSAFNDLFRGGERSMIIEGGAGDDRIVAGGGND 1185
Score = 44.3 bits (103), Expect = 0.057, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGSSGNDVVIGNSANN 287
LD I + + + G+ AQ V IE + GS+ ND+ G +
Sbjct: 1111 LDTASYADSTTSIFIREVPGAQMLGFRGE---AQGDVLIDIERIEGSAFNDLFRGGERSM 1167
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +G+D G DT F + L
Sbjct: 1168 IIEGGAGDDRIVAGGGNDTIFGQDGNDL 1195
Score = 44.3 bits (103), Expect = 0.063, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 46/139 (33%), Gaps = 23/139 (16%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----- 323
+ +VG +G+D ++G ++ F G D DG G+DT + + +
Sbjct: 841 DVIVGLAGDDRLLGLEGDDTLFPGEGADTVDGGDGIDTVDFSDLTGAVLTSAHQGLLPAG 900
Query: 324 ----------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A I D +S+VER R D A
Sbjct: 901 ARAGINVLLNDGVETAAEINSDGTLGAVTEVSNVERWRLTDFADVLRLDLASP--GDLAE 958
Query: 368 YEDLIQVIGQDVFESMKHF 386
D+ + G DV E+ F
Sbjct: 959 LRDVSTLGGDDVVEATGLF 977
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 21/58 (36%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G++ DV++G + ++ G+D G DT A++
Sbjct: 834 LRGTAQADVIVGLAGDDRLLGLEGDDTLFPGEGADTVDGGDGIDTVDFSDLTGAVLTS 891
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S SS T T +E ++G+ +D + G++A+ F+ + G+D + ++G D
Sbjct: 1379 GSLSSTDRVLSRDTF---TNVEGIIGTDRDDEMFGSAADEAFYGNGGDDYVEAAAGDDIL 1435
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHK 334
+ L + V
Sbjct: 1436 GFGEGQALKNLTNPPGDTAVPVFGRQG 1462
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N +A VI + S+GN + G + +V +G+D G G DT F +
Sbjct: 814 QANADLAAANVI---LASAGNPELRGTAQADVIVGLAGDDRLLGLEGDDTLFPGEGADTV 870
Query: 317 KIYRFENAIIVYD 329
+ + D
Sbjct: 871 DGGDGIDTVDFSD 883
>gi|155369235|ref|NP_001094401.1| matrix metallopeptidase 13 (collagenase 3) [Xenopus laevis]
gi|1223974|gb|AAC59870.1| collagenase-3 [Xenopus laevis]
Length = 472
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 53/190 (27%), Gaps = 45/190 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKF 81
W + Y+ T + D+ + AL WS V L F + +DI
Sbjct: 114 WPRNNLTYRIVNYTPDLSTSDV-------DRAIKKALKVWSDVTPLNFTRLRTGTADIMV 166
Query: 82 ISS---NNGYVCTPRYDSR---YFMEINFDKADV------WRYGIGKGTILSHNALHEIG 129
+ Y D F D KG L A HE G
Sbjct: 167 AFGKKEHGDYYPFDGPDGLLAHAFPPGEKIGGDTHFDDDEMFSTDNKGYNLFVVAAHEFG 226
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HALGL H S+M P + + S D+
Sbjct: 227 HALGLDHSRDPG-------------------SLM---FPVYTYTETSRFVLP---DDDVQ 261
Query: 190 AVQKIYGAPK 199
+Q +YG+
Sbjct: 262 GIQALYGSGN 271
>gi|6754714|ref|NP_034939.1| stromelysin-1 preproprotein [Mus musculus]
gi|54872|emb|CAA44860.1| transin-1 [Mus musculus]
gi|13879491|gb|AAH06725.1| Matrix metallopeptidase 3 [Mus musculus]
gi|28300433|gb|AAO37583.1| matrix metalloproteinase 3 [Mus musculus]
gi|148692988|gb|EDL24935.1| mCG9886 [Mus musculus]
Length = 479
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 62/197 (31%), Gaps = 54/197 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI-- 79
W I Y+ T + AL W +V LTF S +DI
Sbjct: 111 WRKSHITYRIVNYTPDLPRQSV-------DSAIEKALKVWEEVTPLTFSRISEGEADIMI 163
Query: 80 KFISSNNG---------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
F +G Y P + + +FD + W + GT L A
Sbjct: 164 SFAVGEHGDFVPFDGPGTVLAHAYAPGPGING----DAHFDDDERWTEDV-TGTNLFLVA 218
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H +M Y + + S + F
Sbjct: 219 AHELGHSLGLYHSAKAEA-------------------LM-YPVYKSSTDLSRFHLSQ--- 255
Query: 185 VSDIVAVQKIYGAPKGS 201
D+ +Q +YG P S
Sbjct: 256 -DDVDGIQSLYGTPTAS 271
>gi|317154589|ref|YP_004122637.1| FG-GAP repeat-containing protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944840|gb|ADU63891.1| FG-GAP repeat protein [Desulfovibrio aespoeensis Aspo-2]
Length = 594
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 11/173 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLL-----DLTLIGGVKNYIDLNTESWSS 252
S G+ I + G G+D L L+GG N + L +
Sbjct: 375 SSFGDRITGDARANTILGGNGNDWLDGQDGNDTLVGGSGHDWLLGGNGNDLLLGGDGNDL 434
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + G +GND ++G + ++ F +G+DV G G D
Sbjct: 435 LFGDAGSDQLYGGNGDDILFGGNGNDTLLGGNGGDILFGGNGDDVLCGGLGHDILVGGKG 494
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
S + + + +D L + F + + +V+ L
Sbjct: 495 SDTFHYSSPDEGGDLITGFTQGEDVL----QFAFGSKSLHTVHEPYGGTLAGA 543
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ VGSS D + G++ N +GND DG G DT + + ++ D
Sbjct: 371 NAVGSSFGDRITGDARANTILGGNGNDWLDGQDGNDTLVGGSGHDWLLGGNGNDLLLGGD 430
Query: 330 AN-----EHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N + D L + + + F D++ + + + +D+
Sbjct: 431 GNDLLFGDAGSDQLYGGNGDDILFGGNGNDTLLGGNGGDILFGGNGDDV 479
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 8/154 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D+ +D + V + L+ S ++ G I +++G +GND + G N+
Sbjct: 348 DNTMDHS-ASKVAVKLALSGNSPANAVGSSFGDRITGDARANTILGGNGNDWLDGQDGND 406
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERL 344
SG+D G +G D + L F +A + D L + L
Sbjct: 407 TLVGGSGHDWLLGGNGNDLLLGGDGNDLL----FGDAGSDQLYGGNGDDILFGGNGNDTL 462
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ +L ++ L+ G D
Sbjct: 463 LGGNGGDILFGGNGDDVLCGGLGHDILVGGKGSD 496
>gi|21305108|gb|AAM45569.1| AqxA [Actinobacillus equuli]
Length = 987
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N T + + G++GND + G + N+ GND DG G D+
Sbjct: 742 FKGSKFNDTFFGGDEKDIIYGNAGNDRLFGGNGNDEIDGGDGNDFIDGGKGNDSLTGGYG 801
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ +Y I++ + + + L +RL F D + +
Sbjct: 802 NDIYVIHKEDGQDFITE--------LGGDDRLVFTDTELSRLTF 837
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 18/161 (11%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G ++ I + + + G +GND + G N+ GND G G D + +
Sbjct: 750 TFFGGDEKDIIYGNAGNDRLFGGNGNDEIDGGDGNDFIDGGKGNDSLTGGYGNDIYVIHK 809
Query: 312 PSYLYKIYRFENA--IIVYDANEHKQDFLSD----------------VERLRFADQCIDS 353
I ++ D + F D + F DQ +
Sbjct: 810 EDGQDFITELGGDDRLVFTDTELSRLTFKRDKKVLIIEDSAHNNQVRISDWFFKDQATLN 869
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+S L+ E++I G + G SEG
Sbjct: 870 KEYHAQSALDKDYRIEEIIDKNGTRITADQIDTILNGKSEG 910
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+ D+ G+ N+ FF D+ G++G D F +
Sbjct: 730 VEEIIGTKNQDIFKGSKFNDTFFGGDEKDIIYGNAGNDRLFGGNGNDEID----GGDGND 785
Query: 328 YDANEHKQDFLSD 340
+ D L+
Sbjct: 786 FIDGGKGNDSLTG 798
>gi|301752966|ref|XP_002912340.1| PREDICTED: matrix metalloproteinase-15-like [Ailuropoda
melanoleuca]
Length = 648
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 63/207 (30%), Gaps = 56/207 (27%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + E R A W + L F+E
Sbjct: 120 YALTGRKWTNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPY 172
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 173 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 232
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + + +M D+
Sbjct: 233 STDLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQ----------------WMDTDT 276
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAP 198
D+ +Q++YG P
Sbjct: 277 FQLPE---------DDLRGIQQLYGEP 294
>gi|149633279|ref|XP_001510024.1| PREDICTED: similar to matrilysin [Ornithorhynchus anatinus]
Length = 270
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 65/195 (33%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTH--RLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI 79
W++ + Y+ T+ R D + + A WS+V L F+ +DI
Sbjct: 105 WTSKIVTYRIAAYTSQLRRSRVDF---------IIKRAFNMWSRVTTLFFKRVYWGPADI 155
Query: 80 ------KFISSNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALH 126
++ N + + F + +FD+ + W G G L H
Sbjct: 156 IIGFARRYHGDNYPFDGRGNTLAHAFAPGPDLGGDAHFDEDEKWTEGYKSGINLPFVVTH 215
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + N VM ++ D
Sbjct: 216 ELGHSLGLGHSSNPNA-------------------VMYPTYNENEPWDFQLS------QD 250
Query: 187 DIVAVQKIYGAPKGS 201
DI +QK+YG +
Sbjct: 251 DIRGIQKLYGNYNNN 265
>gi|124267066|ref|YP_001021070.1| hypothetical protein Mpe_A1877 [Methylibium petroleiphilum PM1]
gi|124259841|gb|ABM94835.1| hypothetical protein Mpe_A1877 [Methylibium petroleiphilum PM1]
Length = 1699
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 33/164 (20%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIG---------------------------GVKNYID 244
D + +G DD +DLT Y++
Sbjct: 1432 TLTDGTPGHAVTAAGTDDTIDLTGWNLSNLSVTGAGSALLEFTATNTVADESRSSTQYMN 1491
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + S + G N T+ + ++G+ GND + G N+ +GND +G++G
Sbjct: 1492 IVDGT-SLLAGGAGNDTLNGTANADLLIGNGGNDTLNGGGGNDRLIGGAGNDTLNGAAGH 1550
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-----DFLSDVER 343
D A L + A+ D ++D
Sbjct: 1551 DVLQGGAGDDLLTGGAGSDTFAWSLADRGASGAPARDTIADFNV 1594
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 15/145 (10%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D L+ T DL + G N T+ + ++G +GND + G +
Sbjct: 1502 GAGNDTLNGTANA------DL-------LIGNGGNDTLNGGGGNDRLIGGAGNDTLNGAA 1548
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--EHKQDFLSDVE 342
++V +G+D+ G +G DTF + + I ++ D L +
Sbjct: 1549 GHDVLQGGAGDDLLTGGAGSDTFAWSLADRGASGAPARDTIADFNVAPVSAGGDSLDLRD 1608
Query: 343 RLRFADQCIDSVNVKQRSILEYTAS 367
L A+ + + T+S
Sbjct: 1609 LLVGANHVGTDPGNLESYLDFDTSS 1633
>gi|311263811|ref|XP_003129862.1| PREDICTED: matrix metalloproteinase-27-like [Sus scrofa]
Length = 508
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 61/189 (32%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + + WS V LTF + S +DI
Sbjct: 104 WKKYNLTYRIVNYTPDMARVDV-------DEAIQKGIEVWSNVTPLTFTKISKGIADIMI 156
Query: 82 ISSNNGYVCTPRYDSRYFM--------------EINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 157 AFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKD-GTGLSLFLVAAHE 215
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +M P MD S Y + D
Sbjct: 216 FGHSLGLSHSNDPTA-------------------LM---FPNYVSMDPSK-YPLS--QDD 250
Query: 188 IVAVQKIYG 196
+ +Q IYG
Sbjct: 251 VNGIQSIYG 259
>gi|297268618|ref|XP_001112141.2| PREDICTED: olfactory receptor 51L1 [Macaca mulatta]
Length = 504
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 64/191 (33%), Gaps = 55/191 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKF 81
W+ Y + Y+ + ++ A+ WS V L F++ +DIK
Sbjct: 29 WNKYTLTYRIINYPHDMKPSTV-------KDSIYNAVSIWSNVTPLIFQQVQNEDADIKI 81
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ P +S ++FDK + W G L A HEI
Sbjct: 82 SFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWS-TSNTGYNLFLVATHEI 140
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMV- 185
GH+LGL H G+ +S+M +Y+ + T +
Sbjct: 141 GHSLGLQHSGN-------------------QSSIMYPTYW----------YHDPGTFQLS 171
Query: 186 -SDIVAVQKIY 195
DI +Q +Y
Sbjct: 172 ADDIQRIQHLY 182
>gi|209528317|ref|ZP_03276775.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491250|gb|EDZ91647.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 848
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 19/174 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +P TIY G+D L + G +Y+D G N ++ +
Sbjct: 613 NDLLRGTPGHDTIYGLAGNDTL---IGGKGNDYLD----------GGPGNDSLLGGAGHD 659
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFEN 323
+++G GND + G N+ G D G +G DT + I+ F+
Sbjct: 660 TLIGGKGNDYLDGGPGNDSLLGGPGRDTLIGGAGNDTLNGGPGQDILTGGPGADIFVFQF 719
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
A +H D +++ ++ + + ++ +L ++ Q
Sbjct: 720 GESRVAAPDHITDLEIGTDKIDLLNRRGRDIGAPENFTRARNSNAPNLRTLVNQ 773
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + +++ G +GND +IG N+ GND G +G DT
Sbjct: 607 IRGTRGNDLLRGTPGHDTIYGLAGNDTLIGGKGNDYLDGGPGNDSLLGGAGHDTLIGGKG 666
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ ++++ +D L
Sbjct: 667 NDYLDGGPGNDSLL----GGPGRDTLIG 690
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 38/127 (29%), Gaps = 12/127 (9%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ GND++ G ++ + +GND G G D + A
Sbjct: 607 IRGTRGNDLLRGTPGHDTIYGLAGNDTLIGGKGNDYLDGGPGNDSL----LGGAGHDTLI 662
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHFYE 388
D+L + R L A + L GQD+ +
Sbjct: 663 GGKGNDYLDG------GPGNDSLLGGPGRDTLIGGAGNDTLNGGPGQDILTGGPGADIFV 716
Query: 389 FGLSEGR 395
F E R
Sbjct: 717 FQFGESR 723
>gi|119587438|gb|EAW67034.1| matrix metallopeptidase 13 (collagenase 3), isoform CRA_a [Homo
sapiens]
Length = 489
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|119487849|ref|ZP_01621346.1| hypothetical protein L8106_28336 [Lyngbya sp. PCC 8106]
gi|119455425|gb|EAW36563.1| hypothetical protein L8106_28336 [Lyngbya sp. PCC 8106]
Length = 724
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNT--ESWSSIGGYEKNMTIAQHTVIES 270
+ +Y G+D L D L GG + I L S G + ++ +
Sbjct: 551 ISEKLYGRAGNDTLAGGLGDDQLFGGDGDDI-LRGDRNHRSPGGSVGGDDILSGGFGNDR 609
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GND + G+ ++ + G+D+ G G DT + + + + ++ D
Sbjct: 610 LGGKGGNDTLYGDEGDDQLWGDHGDDLLWGGLGNDTVTGGQGNDTFVVGVGQGTDLIADF 669
Query: 331 NEHKQ 335
N K
Sbjct: 670 NIGKD 674
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 1/125 (0%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG E+N+ E V G+ ++ + G + N+ G+D G G D
Sbjct: 530 GGQEQNILFGSRDADELV-GTEISEKLYGRAGNDTLAGGLGDDQLFGGDGDDILRGDRNH 588
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ I+ + + L + +L + +
Sbjct: 589 RSPGGSVGGDDILSGGFGNDRLGGKGGNDTLYGDEGDDQLWGDHGDDLLWGGLGNDTVTG 648
Query: 374 VIGQD 378
G D
Sbjct: 649 GQGND 653
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 73/264 (27%), Gaps = 40/264 (15%)
Query: 139 SYNGGYPVYGVDNDY------ENDSFLTSV-----MSYFMPQ-DSMMDASFGYCATPMVS 186
Y G+ + +D+F SV S F P + + + +
Sbjct: 429 EYVSGHSTFSASAATILELVTGSDNFGASVTFEPGQSRFEPNLTPQQEVTLAWDTFSEAA 488
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D + +++G G+ + + +++ + GG + I
Sbjct: 489 DEAGLSRLFGGIHFEDGD----LNGRTLGQDVATEVFEQA-----QFYIEGGQEQNILFG 539
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES----------SGND 296
+ + G E + + +++ G G+D + G +++ G+D
Sbjct: 540 SRDADELVGTEISEKLYGRAGNDTLAGGLGDDQLFGGDGDDILRGDRNHRSPGGSVGGDD 599
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G G D + + + +H D L +
Sbjct: 600 ILSGGFGNDRLGGKGGNDTL----YGDEGDDQLWGDHGDDLLWGG-----LGNDTVTGGQ 650
Query: 357 KQRSILEYTASYEDLIQVIGQDVF 380
+ + DLI
Sbjct: 651 GNDTFVVGVGQGTDLIADFNIGKD 674
>gi|332208026|ref|XP_003253097.1| PREDICTED: interstitial collagenase isoform 2 [Nomascus leucogenys]
Length = 403
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 57/194 (29%), Gaps = 49/194 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 42 RWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFKLWSNVTPLTFTKVSEGQADIM 94
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A HE
Sbjct: 95 ISFVRGDHQDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLYRVAAHE 153
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M +F D
Sbjct: 154 LGHSLGLSHSTDIGA-------------------LM--------YPSYTFSGDVQLAQDD 186
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG +
Sbjct: 187 IDGIQAIYGRSQNP 200
>gi|254424933|ref|ZP_05038651.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196192422|gb|EDX87386.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 1327
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 7/129 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIA 263
T+ G+D LD +L GG N L + S +GG + N T+
Sbjct: 1114 SDTLDGGKGNDTLDGGKGNDTLDGGRGDDSLFGGDGND-SLIGGADSDTLGGGKGNDTLD 1172
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S+ G G D + GN N++ + ND DG G DT + +
Sbjct: 1173 GGKGNDSLDGGRGLDALFGNDGNDILSGGADNDTLDGGRGNDTLDGGRGNDFLTGGSGRD 1232
Query: 324 AIIVYDANE 332
++ D N+
Sbjct: 1233 VLLGGDGND 1241
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 47/137 (34%), Gaps = 5/137 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G+D LD L G N I ++ G N T+
Sbjct: 1159 SDTLGGGKGNDTLDGGKGNDSLDGGRGLDALFGNDGNDILSGGADNDTLDGGRGNDTLDG 1218
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G SG DV++G N+ ND G +G DTF I F++
Sbjct: 1219 GRGNDFLTGGSGRDVLLGGDGNDTLIGGGNNDTLTGGNGRDTFVLSTGDGADTITDFDSK 1278
Query: 325 IIVYDANEHKQDFLSDV 341
+V A LS V
Sbjct: 1279 DLVGLAGGLGIGDLSFV 1295
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 50/162 (30%), Gaps = 5/162 (3%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T + + GDD L IGG I + G + ++ + + G +G+D++
Sbjct: 1053 TRFGTSGDDTL----IGGKNKDILFGLGGNDFLDGGNGDDSLDGGRGRDILFGGNGDDIL 1108
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + ++ GND DG G DT N ++ A+
Sbjct: 1109 FGGADSDTLDGGKGNDTLDGGKGNDTLDGGRGDDSL-FGGDGNDSLIGGADSDTLGGGKG 1167
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L + L + L D +
Sbjct: 1168 NDTLDGGKGNDSLDGGRGLDALFGNDGNDILSGGADNDTLDG 1209
>gi|119494032|ref|ZP_01624588.1| L-sorbosone dehydrogenase [Lyngbya sp. PCC 8106]
gi|119452225|gb|EAW33425.1| L-sorbosone dehydrogenase [Lyngbya sp. PCC 8106]
Length = 617
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N TIA + +++ G +DV+ G + F + G+D G+SG DT +
Sbjct: 51 INGNQNNDTIAGNQGNDTLFGGKDSDVLSGEEGEDQLFGNLGDDQLLGNSGNDTLWGGKQ 110
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + + + + QD LS E + Q + N+ +E D
Sbjct: 111 NDILTGDEGNDWL----SGDFGQDTLSGGEGEDIFVLGQDLSRTNITTSDFIEDFEIGLD 166
Query: 371 LIQVIGQDVFESMKH 385
I + E+++
Sbjct: 167 QIALTDSLTVENLRL 181
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 21/185 (11%)
Query: 171 SMMDASFGYCAT--PMVSDIVA--VQKIYGAPKGSLGNN-IYKIEVQQ--KDSPFIQTIY 223
+ ++ Y T P + I A + + G +G G++ I EV + + TI
Sbjct: 2 TGINPDGFYDLTSNPDIFQIQADLLTNLPGGLRGKRGDDRIIGSEVAEIINGNQNNDTIA 61
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G+D L GG + + E + G + + ++ +++ G ND++ G+
Sbjct: 62 GNQGNDTL----FGGKDSDVLSGEEGEDQLFGNLGDDQLLGNSGNDTLWGGKQNDILTGD 117
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N+ G D G G D F I ++ +DF +++
Sbjct: 118 EGNDWLSGDFGQDTLSGGEGEDIFVLGQDLSRTNITT----------SDFIEDFEIGLDQ 167
Query: 344 LRFAD 348
+ D
Sbjct: 168 IALTD 172
>gi|83646618|ref|YP_435053.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis
KCTC 2396]
gi|83634661|gb|ABC30628.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis
KCTC 2396]
Length = 2095
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 79/247 (31%), Gaps = 33/247 (13%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
+Y + +F TP D +G + G + Q IY
Sbjct: 638 TYDATSITSNGNTFVVPTTPQGLDEA----FHGDDEVHAG----GGDDQILAGAGNDRIY 689
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D++ NY+D G + I I+ +VG +G D + GN
Sbjct: 690 GDAGEDVI---YGIAGNNYLD----------GGDDKDFIYGGVDIDHIVGGAGADTLYGN 736
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE- 342
++ G D G G DT + ++ IV + + D E
Sbjct: 737 KGDDWLQGGLGGDFLYGDEGNDTLDGGGEGDVLAGGEGDDTYIVKRG--YGVTHIKDEEG 794
Query: 343 --RLRFADQ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++FAD I+ + + + + Y A + ++ I + G +
Sbjct: 795 ISTIKFADTYASSTINVIQGEDKVTIRYGAEGDAVVMSIQTFKNAKLVLADTRGPA---T 851
Query: 397 ITFDSYL 403
+D+
Sbjct: 852 PEYDAAG 858
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 10/132 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVI 268
+ I +GG+D + + G L+ S I G N I I
Sbjct: 28 DDAISSKEGTNYISSNGGNDTVTGSNSGDY-----LSGGRGSDIIFGNNGNDCILGGEGI 82
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D ++G + ++ + +DV G SG D + + + +
Sbjct: 83 DHLYGGNGDDTIVGGNEDDTIEGGADSDVLHGQSGADILEGGSGRD----FLYGGSGKDT 138
Query: 329 DANEHKQDFLSD 340
D++
Sbjct: 139 LNGGIGNDYIEG 150
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
E + +I + + G +G+D + G ++ GND +G G DT+
Sbjct: 873 DFSDKESDSSIYAGEGNDILYGGTGDDKLYGEGGDDTLDGGLGNDRLNGGLGADTY---- 928
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
KI N II ++ ++ V+ L
Sbjct: 929 ---NVKIVGGFNDIIDETGSDKNHLNITGVDSL 958
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 1/131 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + I+ + + GND V G+++ + G+D+ G++G D
Sbjct: 24 GGESDDAISSKEGTNYISSNGGNDTVTGSNSGDYLSGGRGSDIIFGNNGNDCILGGEGID 83
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + IV + + +D + L R L + + L
Sbjct: 84 -HLYGGNGDDTIVGGNEDDTIEGGADSDVLHGQSGADILEGGSGRDFLYGGSGKDTLNGG 142
Query: 375 IGQDVFESMKH 385
IG D E
Sbjct: 143 IGNDYIEGGAD 153
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Query: 218 FIQTIYDSGGDDLL------DLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D L D+ G ++I D E S+ ++ + E
Sbjct: 442 GNDTLLGGKGNDYLSGGAGADIIFGGENDDHIHGDSRNEYRSNASSGSAQISN-DDLLTE 500
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G S +DV+ G + + +G+DV DG G D +
Sbjct: 501 VEEGVSYDDVLSGGKGADRIWGEAGSDVIDGGEGDDILWGDRS 543
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N+ + + G SG D + G ++V + ND G +G D + Y +
Sbjct: 1043 GGDDNVHSYGGN--DYLYGGSGQDYLNGGDDDDVIYGGRDNDELQGGNGDDVYVYQSGDC 1100
Query: 315 LYKIYRFENAIIVYDA 330
+ I ++ + D
Sbjct: 1101 VDTIILNKSGLGDKDI 1116
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Query: 249 SWSSI--GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+S I G N+ A+ ++V GND + G S + +DV G D
Sbjct: 1025 SFSQIIRGNESANVITAEG-GDDNVHSYGGNDYLYGGSGQDYLNGGDDDDVIYGGRDNDE 1083
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+Y + + D
Sbjct: 1084 LQGGNGDDVYVYQSGDCVDTIILNKSGLGD 1113
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 55/207 (26%), Gaps = 43/207 (20%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLD--------LTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ I+ G D++D V DL+ N
Sbjct: 506 SYDDVLSGGKGADRIWGEAGSDVIDGGEGDDILWGDRSQVTGLPDLDPL-------LHGN 558
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------------------------S 292
TI+ + + G G+DV+ G + + +
Sbjct: 559 DTISGGAGSDQIYGHGGDDVIDGGADKDYIWGDHDKLAGEFHGNDHIDAGDGEGQIIIGG 618
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G+DV SG D + + I N +V D + A D
Sbjct: 619 GGSDVILSGSGRDMIWADSTYDATSITSNGNTFVVPTT-PQGLDEAFHGDDEVHAGGGDD 677
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + Y + ED+I I +
Sbjct: 678 QILAGAGNDRIYGDAGEDVIYGIAGNN 704
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 15/99 (15%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ G + + + P ++ +D++D + + ES SSI E N
Sbjct: 846 TRGPATPEYDAAGSEGPVSGSL----NNDVIDFS-----------DKESDSSIYAGEGND 890
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ T + + G G+D + G N+ G D ++
Sbjct: 891 ILYGGTGDDKLYGEGGDDTLDGGLGNDRLNGGLGADTYN 929
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 35/132 (26%), Gaps = 42/132 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS---------------------------- 284
+ G + + + + ++G +GND + GN
Sbjct: 371 MDGAAGSDLLVGGSGSDRILGGTGNDWIWGNDSQRLYDDTGAPTPNYAKESASSEDYLDG 430
Query: 285 -----------ANNVFFESSGNDVFDGSSGLDTFFYYAPSY---LYKIYRFENAIIVYDA 330
N+ GND G +G D F + + A
Sbjct: 431 GDGDDWISGDEGNDTLLGGKGNDYLSGGAGADIIFGGENDDHIHGDSRNEYRSNASSGSA 490
Query: 331 NEHKQDFLSDVE 342
D L++VE
Sbjct: 491 QISNDDLLTEVE 502
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 40/148 (27%), Gaps = 24/148 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKIYRF 321
++G +D + N + GND G G D F +
Sbjct: 22 IIGGESDDAISSKEGTNYISSNGGNDTVTGSNSGDYLSGGRGSDIIFGNNGNDC----IL 77
Query: 322 ENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
I + + D + + + ILE + + L G+D
Sbjct: 78 GGEGIDHLYGGNGDDTIVGGNEDDTIEGGADSDVLHGQSGADILEGGSGRDFLYGGSGKD 137
Query: 379 VFES--MKHFYEFGLSEGRDITFDSYLY 404
+ E G D+Y+Y
Sbjct: 138 TLNGGIGNDYIEGGADN------DTYVY 159
>gi|311263813|ref|XP_003129864.1| PREDICTED: neutrophil collagenase-like [Sus scrofa]
Length = 468
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/222 (21%), Positives = 63/222 (28%), Gaps = 54/222 (24%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP D +L W + Y+ T D+ + + AL W
Sbjct: 91 KPRCGVPDSGDFMLTPGNPKWKQTTLTYRIIKYTQQLPKTDV-------ESIIAKALQLW 143
Query: 63 SKVVDLTFEETSIH-SDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKAD 108
S+ L F TS +DIK +N P +++FD +
Sbjct: 144 SQASPLKFISTSEEEADIKIAFVQRDHGDNSPFDGPNGILAHAFQPGPGIGGDVHFDAEE 203
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W K L A HE GH+LGL H YP Y F
Sbjct: 204 TWT-KTSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA-----------------FS 245
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNI 206
+ DI +Q IYG P G
Sbjct: 246 EPSTYSLPQ---------DDINGIQAIYGPSSNPVQPTGPTT 278
>gi|146343785|ref|YP_001208833.1| putative glycosyl transferase [Bradyrhizobium sp. ORS278]
gi|146196591|emb|CAL80618.1| putative Glycosyl transferase, group 2 [Bradyrhizobium sp. ORS278]
Length = 811
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 10/86 (11%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
FD YL S D+ +H+ HG +E R+P F +L Y ++
Sbjct: 19 FDRGFYLRSNPDVAEA----AVDPLQHFCEHGWREFRDPAPFFSLRYYSASASRRETIEG 74
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFD 484
P + H+ G EG +
Sbjct: 75 NPFV------HYIRKGLHEGARTRPE 94
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 10/80 (12%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD YL S D+ +H+ HG +E R+P F +L Y ++
Sbjct: 19 FDRGFYLRSNPDVAEAAVD----PLQHFCEHGWREFRDPAPFFSLRYYSASASRRETIEG 74
Query: 543 APDLVQAGKDHFSNFGYEEG 562
P + H+ G EG
Sbjct: 75 NPFV------HYIRKGLHEG 88
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
Y S D+ + + ++HF E G E RD + L Y + + G
Sbjct: 23 FYLRSNPDVAEAA----VDPLQHFCEHGWREFRDP--APFFSLRYYSASASRRETIEGNP 76
Query: 423 ARHYITHGVKEG 434
HYI G+ EG
Sbjct: 77 FVHYIRKGLHEG 88
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 29/85 (34%), Gaps = 13/85 (15%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
F Y+ S+ D+ A D HF G+ E R F+ Y S
Sbjct: 15 ESGLFDRGFYLRSNPDVAEAAVDP-------LQHFCEHGWREFRDPAPFFSLRYYSASAS 67
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEG 602
+ G+ HYI G+ EG
Sbjct: 68 RRETIEGN----PFVHYIRKGLHEG 88
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 27/85 (31%), Gaps = 13/85 (15%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYD 493
F Y+ S+ D+ A D HF G E R F Y S
Sbjct: 15 ESGLFDRGFYLRSNPDVAEAAVDP-------LQHFCEHGWREFRDPAPFFSLRYYSASAS 67
Query: 494 DLRNVFGSDRGAAARHYITHGVKEG 518
+ G+ HYI G+ EG
Sbjct: 68 RRETIEGN----PFVHYIRKGLHEG 88
Score = 40.5 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 7/68 (10%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
F+ YL S D+ QH+ HG +E R F + SR +
Sbjct: 19 FDRGFYLRSNPDVAEA----AVDPLQHFCEHGWREFRD---PAPFFSLRYYSASASRRET 71
Query: 627 DLSLSFDH 634
F H
Sbjct: 72 IEGNPFVH 79
>gi|254415379|ref|ZP_05029140.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196177854|gb|EDX72857.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 877
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + GN+ + ++ GG+D LD GG N L + ++ G
Sbjct: 699 GQDTLTGGNSRDTFTGGDGND----SLDGGGGEDALD----GGEGNDTLLGGQGQDTLTG 750
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N ++ + + G +GND +IG + + G+D+ G G D
Sbjct: 751 GLGNDSLDGGEGDDRLYGDAGNDTLIGGNGQDQLVGGDGDDLLSGGFGNDQLTGGLGMDT 810
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + EN ++ D + + D L + F D
Sbjct: 811 FVLTAGENQDMIQDFSLGEGDKLGLTNGVTFND 843
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 56/180 (31%), Gaps = 14/180 (7%)
Query: 213 QKDSPFIQTIYDSGG-DDLLDLTLIGGVK-NYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
F TI DS G D +T+ G DLN I G N I ++
Sbjct: 548 TGTGSFDYTITDSQGVTDTATVTIEVGDNFQGTDLNDT----IDGTPGNDRINGGNGSDT 603
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYRFENA 324
+ G +GND + G + +N F G+D G SG DT + S I N
Sbjct: 604 LNGGNGNDSIDGGNGDNQLFGGGGSDTLTGGSGRDTLNGGSGSDFLDGGDGDNILDGGNG 663
Query: 325 IIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + L D + L S + G D +
Sbjct: 664 RDTLIGGNSRDTLIGGNGNDFLDGGDGENTLDGGDGQDTLTGGNSRDTFTGGDGNDSLDG 723
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 41/149 (27%), Gaps = 4/149 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G D L D N S+ G + +
Sbjct: 682 NDFLDGGDGENTLDGGDGQDTLTGGNSRDTFTGGDGND----SLDGGGGEDALDGGEGND 737
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G G D + G N+ G+D G +G DT ++ +
Sbjct: 738 TLLGGQGQDTLTGGLGNDSLDGGEGDDRLYGDAGNDTLIGGNGQDQLVGGDGDDLLSGGF 797
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
N+ L + A + D +
Sbjct: 798 GNDQLTGGLGMDTFVLTAGENQDMIQDFS 826
>gi|89901489|ref|YP_523960.1| VCBS [Rhodoferax ferrireducens T118]
gi|89346226|gb|ABD70429.1| VCBS [Rhodoferax ferrireducens T118]
Length = 3026
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 6/133 (4%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y T+ GG+D L +GG+ I + + G +
Sbjct: 904 YDYADYLDGGAGADTLIAGGGNDTL----LGGIGADILQGEQGDDFLDGGGDKDMLYGGA 959
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G +G+DV++ S ++ F +GND SG D Y I + +
Sbjct: 960 GNDQMEGGAGDDVLMAGSGDDSLFGGAGNDTLYADSGKDLMDGGEDDDTYVIASGQGVKV 1019
Query: 327 VYDANEHKQDFLS 339
V D+ D L
Sbjct: 1020 VRDS--GGVDTLR 1030
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 8/122 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G++ +D + G++ N+ +GND DG +G D A Y I + + ++
Sbjct: 1104 DVLLGTALDDTLYGSAGNDTVDGRAGNDWIDGGTGADQMTGGAGDDNYVIDQAGDQVVEL 1163
Query: 329 DANEHKQDFLSD--------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +S VE L A I + + L L+ + G D
Sbjct: 1164 EGGGRDTVTVSFDYTLNVAHVESLVLAGAAITGIGNNLDNGLYGNELANTLMGLAGDDTL 1223
Query: 381 ES 382
Sbjct: 1224 AG 1225
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 12/146 (8%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + + + GDD + + + I+ E + ++
Sbjct: 2126 TTGAGDQVLTGNAGRNRLDGGTGADRMLGGSGDDTYVVDDV--LDQVIENPDEGFDTVRT 2183
Query: 256 YEKNMTIAQ---HTVIE----SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ T++ V+E + G+S N+V+IGN+ NN+ +GND G G D
Sbjct: 2184 ALNDFTLSAELEGLVLEGAALNGFGNSANNVLIGNAQNNILEGFAGNDTLAGWRGNDELR 2243
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHK 334
A + Y R + V D+
Sbjct: 2244 GGAGNDTYAFSRGDGVDAVIDSEGSG 2269
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 68/199 (34%), Gaps = 20/199 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDS--GGDDLLDLTLIGGV--KNYIDLNTESWSSIGGYEK 258
G+ V ++ I D GG D ++ TL G + DL + ++IGG
Sbjct: 1577 GDGYDTYVVDSVGDTVVEEIADEWVGGRDAVETTLDGYRLGAHVEDLYLKGDANIGGIGN 1636
Query: 259 NMT--IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + ++ + G G+D + GN ++ SGND +G G D Y
Sbjct: 1637 ELANDLYGNSGANVLEGLEGDDELYGNGGDDRLIAGSGNDQLNGGIGSDFMSGGQGDDRY 1696
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + D H D+ V+ + +E Y+ + V
Sbjct: 1697 IVDDAGDVVSELDGEGH--------------DRVYSEVSYTLGAGVEDLRLYDSSVTVGL 1742
Query: 377 QDVFESMKHFYEFGLSEGR 395
+ + G S R
Sbjct: 1743 YGRGNQLANTIYGGYSANR 1761
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 25/195 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSI-GGYE 257
+L + +Y + GG +T G NY ID + + GG
Sbjct: 1109 TALDDTLYGSAGNDTVDGRAGNDWIDGGTGADQMTGGAGDDNYVIDQAGDQVVELEGGGR 1168
Query: 258 KNMTIAQHTVIE-----------SVVGSSGND------------VVIGNSANNVFFESSG 294
+T++ + + + GN+ ++G + ++ G
Sbjct: 1169 DTVTVSFDYTLNVAHVESLVLAGAAITGIGNNLDNGLYGNELANTLMGLAGDDTLAGGDG 1228
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D+ +G G DT + +++ + + A +S + ++
Sbjct: 1229 DDLLNGGEGADTMSGGLGNDTFRVDNAGDRVEDVAATRQAGVLVSGGQDHVYSTVSYTLG 1288
Query: 355 NVKQRSILEYTASYE 369
+ + L+ S +
Sbjct: 1289 SGIESLTLDGEGSID 1303
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 46/150 (30%), Gaps = 19/150 (12%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV- 288
LD+ + + + +SI Y+ + ++++ GND ++G ++
Sbjct: 878 TLDVAQTTADDWLLGIEPPADASILYYDYADYLDGGAGADTLIAGGGNDTLLGGIGADIL 937
Query: 289 -----------------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ +GND +G +G D + N + D+
Sbjct: 938 QGEQGDDFLDGGGDKDMLYGGAGNDQMEGGAGDDVLMAGSGDDSL-FGGAGNDTLYADSG 996
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ D D + A V +
Sbjct: 997 KDLMDGGEDDDTYVIASGQGVKVVRDSGGV 1026
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 9/145 (6%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIES-----VVGSSGNDVVIGNSANNVFFESSGNDVFD 299
L+ +S+S G + +I + + G G D +IG + ++ +G+D+
Sbjct: 1516 LSGDSYSYGYGRHGVGNSLSNVIIGNSQSNHLEGLGGADTLIGKAGHDRLDGGTGDDLMQ 1575
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV----ERLRFADQCIDSVN 355
G G DT+ + + + DA E D + D I +
Sbjct: 1576 GGDGYDTYVVDSVGDTVVEEIADEWVGGRDAVETTLDGYRLGAHVEDLYLKGDANIGGIG 1635
Query: 356 VKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + L + G D
Sbjct: 1636 NELANDLYGNSGANVLEGLEGDDEL 1660
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 73/203 (35%), Gaps = 10/203 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + + +D+ ++ L ++ + + + ++ G N
Sbjct: 2706 STSTDTGALASADYQAIGGYEDGWDT-VISTINYVLPAHMQALLLDGSGAINATGNALDN 2764
Query: 260 MTIA-QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYA 311
+ + + + SG D++ G ++ + +G+++ DG +G+D + +
Sbjct: 2765 WLVGNSGSNVLNAGSGSGTDILQGGQGSDQLTDGAGSNLLDGGAGVDVLTDGEGASWLFG 2824
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I +++ ++ D ++ + A+ + + + L DL
Sbjct: 2825 GKGNDTINLGQDSDLLGFNRGDGADVVNPGQE-ALANDVVSLGKGIRYADLRLAKKGNDL 2883
Query: 372 IQVIGQDVFESMKHFYEFGLSEG 394
+ +G + +Y +++G
Sbjct: 2884 VLDVGAGDSITFSKWYVGSVNKG 2906
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
V G GND +IG+++ N+ +G+D+ G GL+T + +
Sbjct: 639 VYGLDGNDALIGDASQNLIDGGAGDDLIAGGLGLNTLIGGEGNDI 683
Score = 45.5 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 8/83 (9%)
Query: 250 WSSIGGYEKNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+SS + A + + ++G G+D + G+ + GND+ G
Sbjct: 1364 YSSFEQDSGSAAPAYGVLQIDISSPQGDELLGGEGDDQLWGDINGDSLVGGGGNDLLVGY 1423
Query: 302 SGLDTFFYYAPSYLYKIYRFENA 324
G DT Y +
Sbjct: 1424 WGGDTLQGGTGDDTYVVDSSTQW 1446
Score = 41.3 bits (95), Expect = 0.63, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 13/147 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA----QHTVIES 270
+ T GG+D++D V + D + + +A
Sbjct: 1854 GNDGHDTALGHGGNDVMDGRAGNDVMDGGDDDDVMYGGADAIYAYFEVAEQYYGGVSRHV 1913
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ + +D + G S N+ SGND G G D A + + + +
Sbjct: 1914 ELLAQNSDELHGGSGNDQMDGGSGNDQLFGDQGDDVLHGGADGLVARSEAYIQYDVEVTP 1973
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVK 357
E+ D +D
Sbjct: 1974 AS---------EQFHTNDDTLDGGGGN 1991
Score = 40.5 bits (93), Expect = 0.86, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 8/87 (9%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--------FDGSSGL 304
+ G + N + + G +G+D++ G N GND+ G G
Sbjct: 639 VYGLDGNDALIGDASQNLIDGGAGDDLIAGGLGLNTLIGGEGNDIILTHFTPGIAGRRGP 698
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDAN 331
D + + + + DA
Sbjct: 699 DDSWAAPTEARALLAQGATWGVYKDAQ 725
Score = 38.2 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 34/188 (18%)
Query: 231 LDLTLIGGVKNYIDLNTESW-SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+D L + N ++ +SW + N + + + G+DV GN ++
Sbjct: 754 VDYFLYPVLTNPLNAIEQSWVTETDAGAGNDIVLGGIATDIIDLGDGDDVAFGNLGHDDI 813
Query: 290 FESSGN-----------------------DVFDGSSGLDTFFYYAPSYLYKIYR-----F 321
+G D+ DG +G D + + F
Sbjct: 814 RGGAGADRLYGDVGKAGISASLAYYPIGDDLLDGGAGQDILVGGLGADILYGGSEDDLLF 873
Query: 322 ENAIIVYDANEHKQDFLSDVE-----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + A D+L +E + + D L + L+ IG
Sbjct: 874 GDYVTLDVAQTTADDWLLGIEPPADASILYYDYADYLDGGAGADTLIAGGGNDTLLGGIG 933
Query: 377 QDVFESMK 384
D+ + +
Sbjct: 934 ADILQGEQ 941
Score = 37.0 bits (84), Expect = 9.2, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--- 298
ID+++ + G E + + +S+VG GND+++G + +G+D +
Sbjct: 1382 QIDISSPQGDELLGGEGDDQLWGDINGDSLVGGGGNDLLVGYWGGDTLQGGTGDDTYVVD 1441
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ D + + +++ Y+ + + + + D + +
Sbjct: 1442 SSTQWWDQWAWNGRFWIHFEYQNGDTDEILEETDEGIDTVLSLNDF 1487
Score = 37.0 bits (84), Expect = 9.2, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 25/65 (38%)
Query: 277 NDVVIGNSANNVFFESSG-------------------------NDVFDGSSGLDTFFYYA 311
+D + G N+V SG NDV DG +G+DT
Sbjct: 1982 DDTLDGGGGNDVLDGGSGNDLLLGGDGDDYLYGGDDGPLNTSNNDVLDGGAGIDTMRGGT 2041
Query: 312 PSYLY 316
++
Sbjct: 2042 GDDIF 2046
>gi|32306839|gb|AAP78940.1| collagenase-3 deletion variant COL3-DEL [Homo sapiens]
Length = 383
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|62896761|dbj|BAD96321.1| matrix metalloproteinase 10 preproprotein variant [Homo sapiens]
Length = 476
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 57/195 (29%), Gaps = 48/195 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNYTPDLPR-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D + G+ Y + +I+FD + W GT L A HE
Sbjct: 161 SFAVKEHGDF-YSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHE 218
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + +M Y + A F D
Sbjct: 219 LGHSLGLFHSANTEA-------------------LM-YPLYNSFTELAQFRLSQ----DD 254
Query: 188 IVAVQKIYGAPKGSL 202
+ +Q +YG P S
Sbjct: 255 VNGIQSLYGPPPAST 269
>gi|144898504|emb|CAM75368.1| RTX toxins and related Ca2+-binding proteins [Magnetospirillum
gryphiswaldense MSR-1]
Length = 897
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 12/192 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ + S I D+ D + + +D++ +S+I
Sbjct: 534 STGAGNDTISFDDVNFPSIGIVVDGDASAVDSDKVIIYQTQAGTLDVSASVFSNIE---- 589
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ V +S + V+IGNS NN +G+D G +G DT A S ++
Sbjct: 590 --------TVALVAATSSDVVLIGNSLNNSLVGGAGSDKLTGGTGADTLTGGAGSDVFVY 641
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + DF S + + + S+ Y L + +
Sbjct: 642 TTPTESANALANRDTITDFTSGTDHIHISVSGAHVDVSGFESVGSYNLGQASLTGGVART 701
Query: 379 VFESMKHFYEFG 390
FY G
Sbjct: 702 GGVIGDCFYAGG 713
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 56/155 (36%), Gaps = 23/155 (14%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE------SVVGSSGNDVV 280
G + D GGV + + + SS + IA T I ++ G++G D +
Sbjct: 702 GGVIGDCFYAGGVDQALYVWVGNSSSNINTDGGYVIASPTAIAAADLDFNISGTAGTDTL 761
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G + N+ S G D G++G D+F ++ ++N DF
Sbjct: 762 VGGAGNDTLIASLGGDSLTGNAGTDSF-----------------VLADNSNTTITDFTVG 804
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + ++ + ++ +Y +
Sbjct: 805 TDTVTLSNTEFALGSSGTLAVSDYAEGATAMSGTA 839
>gi|114640117|ref|XP_001154241.1| PREDICTED: matrix metalloproteinase 13 isoform 1 [Pan troglodytes]
Length = 383
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|114640121|ref|XP_508725.2| PREDICTED: matrix metalloproteinase 13 isoform 3 [Pan troglodytes]
Length = 489
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|32306837|gb|AAP78939.1| collagenase-3 splice variant COL3-9B-2 [Homo sapiens]
Length = 489
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|296480356|gb|DAA22471.1| matrix metalloproteinase-20 precursor [Bos taurus]
Length = 481
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 63/190 (33%), Gaps = 42/190 (22%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNG 87
++K + LT + + AL WS V L F + +DI
Sbjct: 114 KWKKNTLTYRISKYTPSMTPAEVDRAMEMALRAWSSAVPLNFVRINAGEADIMISFETGD 173
Query: 88 YVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + +D + +FD A+ W G G L A HE GHALGL
Sbjct: 174 HGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN-GFNLFTVAAHEFGHALGL 232
Query: 135 MHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H + YP Y N Y + +P+D D+ +Q
Sbjct: 233 AHSTDPSALMYPTYKYQNPYG----------FRLPKD----------------DVKGIQA 266
Query: 194 IYGAPKGSLG 203
+YG + G
Sbjct: 267 LYGPRRAFSG 276
>gi|262276072|ref|ZP_06053881.1| hemolysin-type calcium-binding region [Grimontia hollisae CIP
101886]
gi|262219880|gb|EEY71196.1| hemolysin-type calcium-binding region [Grimontia hollisae CIP
101886]
Length = 691
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 49/115 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E + T+ +++ G +GNDV++GN +++ + G+D+ G SG D + A
Sbjct: 426 IEGNEGDDTLRGGAGNDTIYGGAGNDVLLGNEGDDILYGGDGDDILRGGSGSDALYGGAG 485
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + ++ I+ + + L F + VN + + Y
Sbjct: 486 NDYLQAGYDDDYILDGGSGLDLYRGSEGNDILLFDQEDFSDVNFLKENGNIYLGD 540
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
L G Y L S ++ + TI +++ G GND + G N+
Sbjct: 145 TLRFEGKGASDGYGALIDNVSLTNAKAGSLDDTINGFEGEDNIDGGQGNDTLFGGEGNDT 204
Query: 289 FFESSGNDVFDGSSG 303
GND G+ G
Sbjct: 205 LKGGEGNDTIYGNKG 219
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 248 ESWSSIGGYEKNMTIA---QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ G N+++ ++ +++ G G D + G N+ F GND G G
Sbjct: 152 GASDGYGALIDNVSLTNAKAGSLDDTINGFEGEDNIDGGQGNDTLFGGEGNDTLKGGEGN 211
Query: 305 DTFFYYAPSY 314
DT + +
Sbjct: 212 DTIYGNKGTG 221
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 7/136 (5%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + + + T+ G+D + GG N + L E + G + +
Sbjct: 414 DDTIYGEQGDDYIEGNEGDDTLRGGAGNDTI----YGGAGNDVLLGNEGDDILYGGDGDD 469
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANN-VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +++ G +GND + ++ + SG D++ GS G D + + +
Sbjct: 470 ILRGGSGSDALYGGAGNDYLQAGYDDDYILDGGSGLDLYRGSEGNDILLFDQEDFSDVNF 529
Query: 320 RFENAIIVYDANEHKQ 335
EN I Q
Sbjct: 530 LKENGNIYLGDRGFDQ 545
Score = 38.6 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
K + +I++V ++ S ++ G D DG G DT F + K
Sbjct: 151 KGASDGYGALIDNVSLTNA----KAGSLDDTINGFEGEDNIDGGQGNDTLFGGEGNDTLK 206
Query: 318 IYRFENAIIVYDANEHKQDFLS 339
+ I L
Sbjct: 207 GGEGNDTIYGNKGTGPGARELM 228
>gi|115345580|ref|YP_771762.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
gi|115292901|gb|ABI93354.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
Length = 2517
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 29/174 (16%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDL 245
++YG + GN +Y +E + T+ G+D L D L GG I L
Sbjct: 1486 RLYG---NAAGNQLYGLEGDDVLEGRGGTDTLVGGSGNDTLRGGSEDDYLFGGKGADI-L 1541
Query: 246 NTES-----------WSSIGGYEKNMTIAQHT-------VIESVVGSSGNDVVIGNSANN 287
+ S SSI ++ ++ + IE + GS+ +D + GN+ N
Sbjct: 1542 DGGSGANDFAQYSAAISSIVASLRDASVNRGEATGDTFFGIEHLAGSAHDDELYGNNKTN 1601
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
V GND+ DG +G D + + + N ++YD N + D +S
Sbjct: 1602 VLNGGDGNDILDGGAGQDHYTGGLGADTFVHDGGRNQDVIYDFNPSQGDRISFF 1655
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 6/153 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D LD G + + L ++ G E I + V G GND + G N
Sbjct: 1916 GNDTLD----GNTGDDLLLGAGGEDTLNGGEGRDQIFGGIGNDLVNGGLGNDTLNGGEGN 1971
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ F GND+ G G DT + + + + N+ + ++ L
Sbjct: 1972 DTIFGDEGNDIIFGGDGDDTINSGSGNDNVDAGDGADIVEGGLGNDLLNGG-TGIDTLL- 2029
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D+++ + + Y + L G D+
Sbjct: 2030 GGAGNDTLDAEDGTDGVYLLQAQILRGGTGDDI 2062
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 68/205 (33%), Gaps = 15/205 (7%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGG 255
G+ G+++ E I+ G+DL++ L LN + I G
Sbjct: 1922 GNTGDDLLLGAGGEDTLNGGEGRDQIFGGIGNDLVNGGLGNDT-----LNGGEGNDTIFG 1976
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I +++ SGND V ++ GND+ +G +G+DT A +
Sbjct: 1977 DEGNDIIFGGDGDDTINSGSGNDNVDAGDGADIVEGGLGNDLLNGGTGIDTLLGGAGNDT 2036
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFA------DQCIDSVNVKQRSILEYTASYE 369
+ + + A + D+ R+ D ++ + Y +
Sbjct: 2037 LDAEDGTDGVYLLQAQILRGGTGDDIYRISANAGDVVIDAAGEAEVGGTDRVEFYDLALS 2096
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEG 394
D+ I ++G
Sbjct: 2097 DITVSIWDSGNAVDGVMLTLSWNKG 2121
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L GG + + E I G T+ +++ G GND +G ++ F
Sbjct: 2210 DDILKGGADDDVLFGEEGDDGIQGGNGEDTLNGGLGNDTLNGGEGNDTFMGGEGDDTVFG 2269
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND+ DG +G D A + A D ++
Sbjct: 2270 QDGNDIIDGGAGNDVLRGNFGDD----TINGGAGDDFLAGSGGSDLITG 2314
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 9/127 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGSSGND 278
+ G D D Y + + + +N A+ V +E V S+ +D
Sbjct: 1426 LVGGSGADSFDGGAGTDQALYNNAASSITLDLENAHRNRGEAEGDVFTNVELFVASNHDD 1485
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN------AIIVYDANE 332
+ GN+A N + G+DV +G G DT + + + ++ + D
Sbjct: 1486 RLYGNAAGNQLYGLEGDDVLEGRGGTDTLVGGSGNDTLRGGSEDDYLFGGKGADILDGGS 1545
Query: 333 HKQDFLS 339
DF
Sbjct: 1546 GANDFAQ 1552
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 3/117 (2%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + ++ G G+D ++G + ++ + G D DG +G+DT Y + I
Sbjct: 1293 IDGNPGANTLAGDGGDDTLLGRAGDDRLIGNGGADRLDGGAGIDTVDYLSSWAGVNIDLA 1352
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
DA D L +E + + L + + LI G D
Sbjct: 1353 LGTGSGGDAEG---DVLVSIEHAVGSHYDDVIAGNSADNRLNGLSGSDTLIGNDGSD 1406
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N T+ + + + G GND + G N+ F +GND+ G G D A
Sbjct: 2384 LSGEDGNDTMFGGSNDDVLHGGEGNDRIEGQQQNDDLFGQNGNDILRGGDGSDLLDGGAG 2443
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + I++ + + F + ++
Sbjct: 2444 NDVLA-GGNGGDILIGGLGADILRGNAGFDTFVFNNTADSTLTAT 2487
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 17/133 (12%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRF 321
++++GS+G D + G S +++ G DV DG +G D + ++
Sbjct: 2166 DNLIGSAGADTLEGGSGDDLLKGFGGADVLDGGNGYDQLSGGQGDDILKGGADDDVLFGE 2225
Query: 322 ENAIIVYDANEH-------KQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDL 371
E + N D L+ E + I++ A + L
Sbjct: 2226 EGDDGIQGGNGEDTLNGGLGNDTLNGGEGNDTFMGGEGDDTVFGQDGNDIIDGGAGNDVL 2285
Query: 372 IQVIGQDVFESMK 384
G D
Sbjct: 2286 RGNFGDDTINGGA 2298
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 18/158 (11%)
Query: 230 LLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+DL G + D + S + ++ G E N I + G +GND++ G ++V
Sbjct: 994 TIDLAAGTGSGGHADGDVFSGFENVQGSEHNDIIRGDAGTNLLNGENGNDILEGRDGDDV 1053
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-----------------AN 331
F ++G+D G +G D + ++ + A
Sbjct: 1054 LFGATGDDTLRGGNGDDILSALQGREHFDGGAGQDLVSYKHGFLSTGVHVDLSQGRGFAG 1113
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
E D + VE + + + + + +
Sbjct: 1114 EAHDDTYTGVENVTGSRHNDILIGDGSANYIRDGGGHA 1151
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 35/195 (17%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------------GYEKNMT 261
+ + G D +D L IDL + S G +
Sbjct: 1322 GNGGADRLDGGAGIDTVDY-LSSWAGVNIDLALGTGSGGDAEGDVLVSIEHAVGSHYDDV 1380
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFF------------------ESSGNDVFDGSSG 303
IA ++ + G SG+D +IGN ++ SG D FDG +G
Sbjct: 1381 IAGNSADNRLNGLSGSDTLIGNDGSDTLIGGDGDDDLRGGNGDDLLVGGSGADSFDGGAG 1440
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D Y + + + E + D ++VE ++ + L
Sbjct: 1441 TDQALYNNAASSITLDLENAH---RNRGEAEGDVFTNVELFVASNHDDRLYGNAAGNQLY 1497
Query: 364 YTASYEDLIQVIGQD 378
+ L G D
Sbjct: 1498 GLEGDDVLEGRGGTD 1512
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 48/109 (44%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ +Y+ + +++++ G T + ++GS+ D+++G ++
Sbjct: 1688 FQINNANASYLTSTSVTFTALAGLNFTDTFEGSDGADHLIGSAYGDILLGFDGTDILEGK 1747
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+G+D+ +G +G+DT A + +++ + A + + D+
Sbjct: 1748 AGDDILEGGAGVDTLEGGAGNDTLDAGEGVDSVGLSQAQQLRGGTGDDI 1796
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 13/172 (7%)
Query: 222 IYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I G+D L+ TL GG N + E ++ G + N I + + G+ G
Sbjct: 2231 IQGGNGEDTLNGGLGNDTLNGGEGNDTFMGGEGDDTVFGQDGNDIIDGGAGNDVLRGNFG 2290
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE---- 332
+D + G + ++ S G+D+ G +G DT + + + E++ D N+
Sbjct: 2291 DDTINGGAGDDFLAGSGGSDLITGGAGNDTGYGGDGDDILQGGTGEDSFSGNDGNDVIEG 2350
Query: 333 -HKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L + L IL + + DV
Sbjct: 2351 GDSDDTLFGNNGADTLLGGQGDDFMGGGGGNDILSGEDGNDTMFGGSNDDVL 2402
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 27/145 (18%)
Query: 265 HTVIESVVGSS----------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ VG S GND + GN+ +++ + G D +G G D F +
Sbjct: 1895 GASSDDTVGGSAGDDVLNGEAGNDTLDGNTGDDLLLGAGGEDTLNGGEGRDQIFGGIGND 1954
Query: 315 -----------------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
N II + + S + + D
Sbjct: 1955 LVNGGLGNDTLNGGEGNDTIFGDEGNDIIFGGDGDDTINSGSGNDNVDAGDGADIVEGGL 2014
Query: 358 QRSILEYTASYEDLIQVIGQDVFES 382
+L + L+ G D ++
Sbjct: 2015 GNDLLNGGTGIDTLLGGAGNDTLDA 2039
Score = 44.3 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG-----------NSANNVFFESSGNDVF 298
S G+ +T +E+V GS ND++IG AN+V G D
Sbjct: 1105 LSQGRGFAGEAHDDTYTGVENVTGSRHNDILIGDGSANYIRDGGGHANDVLRGGGGVDWL 1164
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G D + ++I R + +
Sbjct: 1165 ITTGGFDRLWGDGGGDRFRIQREDGDGVAPGPRA 1198
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 67/223 (30%), Gaps = 34/223 (15%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIG 254
G+ G++ SGG DL+ T GG + I S
Sbjct: 2287 GNFGDDTINGGAGDDFLAG------SGGSDLITGGAGNDTGYGGDGDDILQGGTGEDSFS 2340
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVI------------------GNSANNVFFESSGND 296
G + N I +++ G++G D ++ G N+ F S +D
Sbjct: 2341 GNDGNDVIEGGDSDDTLFGNNGADTLLGGQGDDFMGGGGGNDILSGEDGNDTMFGGSNDD 2400
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
V G G D + + N I+ D + + L + +
Sbjct: 2401 VLHGGEGNDRIEGQQQNDDL-FGQNGNDILRGGDGSDLLDGGAGNDVLAGGNGGDILIGG 2459
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEF----GLSEGR 395
IL A ++ + D + + GLS GR
Sbjct: 2460 LGADILRGNAGFDTFVFNNTADSTLTATDEIDGIERIGLSRGR 2502
>gi|332705378|ref|ZP_08425456.1| hypothetical protein LYNGBM3L_07500 [Lyngbya majuscula 3L]
gi|332355738|gb|EGJ35200.1| hypothetical protein LYNGBM3L_07500 [Lyngbya majuscula 3L]
Length = 943
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 12/144 (8%)
Query: 226 GGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
GG+D + D+ G + + + S S G + I + + + G GND
Sbjct: 775 GGNDTIAGALGNDILFGGNGDDILRGDNNSRSPDGKAGGDDIIYGGSGSDRIGGKFGNDS 834
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFY-----YAPSYLYKIYRFENAIIVYDANEHK 334
+ G ++ + +G+D+ G G DT + S + + E + D E
Sbjct: 835 LYGGFGDDQLWGDAGDDLLSGGLGNDTLTGDNFSNGSGSDTFVLEIGEGTDTITD-FELG 893
Query: 335 QDFLSDVERLRFADQCIDSVNVKQ 358
DF+ L F + I S +
Sbjct: 894 TDFIGLGNGLSFGEVSITSDSNNS 917
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 2/132 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G+ D++ G N+ + GND+ G +G D S + II
Sbjct: 760 DQLIGTIDADLINGFGGNDTIAGALGNDILFGGNGDDILRGDNNSRSPDGKAGGDDIIYG 819
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + + L +L + L + S E
Sbjct: 820 GSGSDRIGGKFGNDSLYGGFGDDQLWGDAGDDLLSGGLGNDTLTGDNFSNGSGSDTFVLE 879
Query: 389 FGLSEGRDITFD 400
G EG D D
Sbjct: 880 IG--EGTDTITD 889
>gi|329849046|ref|ZP_08264074.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844109|gb|EGF93678.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1034
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 52/332 (15%), Positives = 97/332 (29%), Gaps = 23/332 (6%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW---RYGIGKGTILSHNALHEIGH 130
+ + + S N +K VW + G+ G
Sbjct: 436 TTGASGMLFDMSQAGTAAGTTLSNGVSVRNVEKVLVWGASQNDTFVGSSGGDTF---FGG 492
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A + G G ND+ N TS + + G +D
Sbjct: 493 AGNDSYTGGAGTNSFSGGEGNDWGNAGTGTSAQMGGGGGNDTLTGGAGADTVAGGNDNDL 552
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ GA G+ + + + G+D + ++ +Y D
Sbjct: 553 LSGADGADTLQGGDGTDTVTGGAGNDVVWGDSGNDLLVGGVGNDTIVGSVGNDTASYADA 612
Query: 246 NTESWSSIGGYEKNMTIAQH----TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + ++ T+ + +E+++GS D + G+ N GND G
Sbjct: 613 ASGVSVDLSLFDTQNTLGAGEDRLSSVENLIGSFTTDALTGDDGANQLNGEGGNDYLVGR 672
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDA-----NEHKQDFLS---DVERLRFADQCIDS 353
G DT + A + ++ + D + +D LS D +RL
Sbjct: 673 DGRDTLYGGAGGDDLRAGAGDDMVFGDDGEDLIFGQDGEDVLSGGADADRLLGGAGNDLL 732
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ IL + + L+ G D E
Sbjct: 733 NGNEGGDILTGGSGNDTLVTSDGDDTLEGGDD 764
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 70/225 (31%), Gaps = 21/225 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNY-IDLNTESWSSIGGYEKNMTIA 263
S T + G+D + GG N + T + + +GG N T+
Sbjct: 477 NDTFVGSSGGDTFFGGAGNDSYTGGAGTNSFSGGEGNDWGNAGTGTSAQMGGGGGNDTLT 536
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++V G + ND++ G + G D G +G D + + + L +
Sbjct: 537 GGAGADTVAGGNDNDLLSGADGADTLQGGDGTDTVTGGAGNDVVWGDSGNDLLVGGVGND 596
Query: 324 AIIVY---------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I+ DA LS + D ++ + I +T
Sbjct: 597 TIVGSVGNDTASYADAASGVSVDLSLFDTQNTLGAGEDRLSSVENLIGSFTTDALTGDDG 656
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
Q E + +GRD + DDLR G D
Sbjct: 657 ANQLNGEGGNDYLVG--RDGRDTLYGG----AGGDDLRAGAGDDM 695
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 9/170 (5%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI G DL L + G + +++ ++ G N ++ V G+S N
Sbjct: 418 GADTIDGGDGVDLFYLDMTTGASGMLFDMSQAGTAAGTTLSNGVSVRNVEKVLVWGASQN 477
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENAIIVYDAN 331
D +G+S + FF +GND + G +G ++F +
Sbjct: 478 DTFVGSSGGDTFFGGAGNDSYTGGAGTNSFSGGEGNDWGNAGTGTSAQMGGGGGNDTLTG 537
Query: 332 EHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D ++ D + L AD + A + + G D
Sbjct: 538 GAGADTVAGGNDNDLLSGADGADTLQGGDGTDTVTGGAGNDVVWGDSGND 587
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 15/170 (8%)
Query: 226 GGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
GG+D L TL GG DL + + + + + G G DV+
Sbjct: 664 GGNDYLVGRDGRDTLYGGAGGD-DLRAGA--------GDDMVFGDDGEDLIFGQDGEDVL 714
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + + +GND+ +G+ G D + + ++ + D N+ D +
Sbjct: 715 SGGADADRLLGGAGNDLLNGNEGGDILTGGSGNDTLVTSDGDDTLEGGDDNDLLTDTIGR 774
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ V +L + L G D + G
Sbjct: 775 G-YMSGETGNDTLVAGDANDVLSGGFGNDSLDAGGGNDTLYGGDQINDDG 823
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 17/172 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + G+D L D TL GG N + +T + G N T+
Sbjct: 729 NDLLNGNEGGDILTGGSGNDTLVTSDGDDTLEGGDDNDLLTDTIGRGYMSGETGNDTLVA 788
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFES-----SGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G GND + N+ + G D G +G D + +
Sbjct: 789 GDANDVLSGGFGNDSLDAGGGNDTLYGGDQINDDGVDTVLGGAGNDEIHTHGGDAIDGGE 848
Query: 320 RFE-------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ + N ++ +E + F + +
Sbjct: 849 GSDILYVHGFESTAAISINAGAGGNVAGIEAISFQGGGFADTLIGSEGGDTF 900
Score = 45.5 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 43/148 (29%), Gaps = 6/148 (4%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+DL + +S G + +++ G GND + G ++ GND G
Sbjct: 322 VVDLASRLTTSQSGTAGDDAQFGTAGQDTIQGLGGNDTLNGLGNSDSLDGGDGNDSLSGG 381
Query: 302 SGLDTFFYYAPSYLYKIYR----FENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVN 355
DT A A + D + + L + D +
Sbjct: 382 EIGDTLNGGAGDDTISGGWNSLLNGGAGDDRLESTLGADTIDGGDGVDLFYLDMTTGASG 441
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESM 383
+ TA+ L + E +
Sbjct: 442 MLFDMSQAGTAAGTTLSNGVSVRNVEKV 469
Score = 45.1 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 71/236 (30%), Gaps = 35/236 (14%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDS--MMDASFGYCATPMVSDIVA---VQKIYGAPKGSL 202
G DND D+ MS D+ DA+ + A +YG + +
Sbjct: 762 GDDNDLLTDTIGRGYMSGETGNDTLVAGDANDVLSGGFGNDSLDAGGGNDTLYGGDQIND 821
Query: 203 G--NNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + D G G D+L + I +N + ++ G E
Sbjct: 822 DGVDTVLGGAGNDEIHTHGGDAIDGGEGSDILYVHGFESTAA-ISINAGAGGNVAGIEA- 879
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF------------------DGS 301
++ ++++GS G D +G + +G D+ G
Sbjct: 880 ISFQGGGFADTLIGSEGGDTFVGGDRADTALGGAGADILHGEAGDDGMDGGGDNDILSGG 939
Query: 302 SGLDTFFYYAPSYLYKIYRFEN-------AIIVYDANEHKQDFLSDVERLRFADQC 350
G D A ++ +V +A D ++ L AD
Sbjct: 940 DGKDNLSGGAGDDTLAGGAGDDIYWVDAIGDVVIEAAGQGDDIVNTTVSLILADGV 995
>gi|300722020|ref|YP_003711300.1| putative proprotein convertase 2 [Xenorhabdus nematophila ATCC 19061]
gi|297628517|emb|CBJ89084.1| putative Proprotein convertase 2 [Xenorhabdus nematophila ATCC 19061]
Length = 1751
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 33/218 (15%)
Query: 157 SFLTSVMSY--FMPQDSM------MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+F S MS F + + D+S G T + ++YG+ ++ Y
Sbjct: 930 TFKYSFMSTHDFGERSAGNWTLQVTDSSSGLPVTLNAWSL----RLYGSKSTP--DDTYF 983
Query: 209 IEVQQKDSPFIQT---IYD------SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ S Q + D +GG + L+ + ++L T S G
Sbjct: 984 YTDEYIQSVVGQANRAVLDDAVNGVAGGRNTLNAAAVS-RDTAVNLLTGVASIGGAA--- 1039
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I + I++++ GND ++ +A+ + GN+ G +G D F + +
Sbjct: 1040 LAIKDPSGIQNIITGDGNDTLVAGNADALLDGGRGNNTLTGGTGKDFFVIHRREAGSDVI 1099
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
A D + + + FAD +
Sbjct: 1100 NN-----FEAARREIIDLVGFIGK-TFADLQLTQQGAD 1131
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 10/147 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA--QHTVIESVVGSSGNDVVIGNS 284
G+D+L + G N I + G + ++ A ++I G+D + G
Sbjct: 246 GNDVL---VGGCGHNTIIGGSGKSVIYAGPQGDIIYASEGGSII---HAGGGDDKIFGGF 299
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVE 342
++V GN DG G++ + Y+I R ++ +V D L +++
Sbjct: 300 GDDVIEVGHGNATIDGDGGVNIVSLHGNHDDYRITRTDDGYVVADKVVGRDGTVTLKNIQ 359
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYE 369
+L FAD + +E +++
Sbjct: 360 KLNFADISAVDLQTPNAMPVEDVLTHD 386
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 5/111 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G SGND +I + +G++ + G +G D F A I+
Sbjct: 136 NLYGGSGNDTLIAAKTGSWLVGGAGSNTYVGGTGDDVFVISASDDTKNIHGNGGHDTAII 195
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + A + I A+ + G V
Sbjct: 196 VGKKGVEL-----NMAQAGLTMAQGGSGSDVIRSGGANGVFIKGGSGDSVL 241
Score = 38.2 bits (87), Expect = 4.2, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+D + +++ G N T+ +VG +G++ +G + ++VF S
Sbjct: 117 YASQSETGETLDADQLGVNNLYGGSGNDTLIAAKTGSWLVGGAGSNTYVGGTGDDVFVIS 176
Query: 293 SGNDV--FDGSSGLDTFFY 309
+ +D G+ G DT
Sbjct: 177 ASDDTKNIHGNGGHDTAII 195
>gi|4835862|gb|AAD30274.1| MMP-1 protein [Bos taurus]
Length = 174
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 52/195 (26%), Gaps = 51/195 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W N + Y+ + T D+ + A WS V LTF + S +DI
Sbjct: 13 WENTNLTYRIENYTPDLSRADV-------DQAIEKAFQLWSNVTPLTFTKVSEGQADIMI 65
Query: 82 IS------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
G + D W + L A HE G
Sbjct: 66 SFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQDYNLYRVAAHEFG 125
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVSD 187
H+LGL H +M SY D + D
Sbjct: 126 HSLGLAHSTDIGA-------------------LMYPSYTFSGDVQLSQ----------DD 156
Query: 188 IVAVQKIYGAPKGSL 202
I +Q IYG +
Sbjct: 157 IDGIQAIYGPSQNPT 171
>gi|4505205|ref|NP_002416.1| stromelysin-2 preproprotein [Homo sapiens]
gi|116869|sp|P09238|MMP10_HUMAN RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
metalloproteinase-10; Short=MMP-10; AltName:
Full=Transin-2; Flags: Precursor
gi|36629|emb|CAA30679.1| unnamed protein product [Homo sapiens]
gi|12803527|gb|AAH02591.1| Matrix metallopeptidase 10 (stromelysin 2) [Homo sapiens]
gi|30583723|gb|AAP36110.1| matrix metalloproteinase 10 (stromelysin 2) [Homo sapiens]
gi|51988876|gb|AAU21039.1| matrix metalloproteinase 10 (stromelysin 2) [Homo sapiens]
gi|60655137|gb|AAX32132.1| matrix metalloproteinase 10 [synthetic construct]
gi|119587433|gb|EAW67029.1| matrix metallopeptidase 10 (stromelysin 2) [Homo sapiens]
gi|123982056|gb|ABM82857.1| matrix metallopeptidase 10 (stromelysin 2) [synthetic construct]
gi|123996885|gb|ABM86044.1| matrix metallopeptidase 10 (stromelysin 2) [synthetic construct]
gi|189054156|dbj|BAG36676.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 57/195 (29%), Gaps = 48/195 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNYTPDLPR-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D + G+ Y + +I+FD + W GT L A HE
Sbjct: 161 SFAVKEHGDF-YSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHE 218
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + +M Y + A F D
Sbjct: 219 LGHSLGLFHSANTEA-------------------LM-YPLYNSFTELAQFRLSQ----DD 254
Query: 188 IVAVQKIYGAPKGSL 202
+ +Q +YG P S
Sbjct: 255 VNGIQSLYGPPPAST 269
>gi|312384573|gb|EFR29270.1| hypothetical protein AND_01925 [Anopheles darlingi]
Length = 1055
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 71/217 (32%), Gaps = 61/217 (28%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-S 74
+++ + W I Y ++ + + +A+ A GEWSK L F
Sbjct: 73 YVIGSESWRKRRITYFIANWSSKVGEESVAKF------MAK-AFGEWSKYSKLRFVRVYD 125
Query: 75 IHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG---IGK 116
+DI + + P + Y +I+FD+ + W+ +G+
Sbjct: 126 PSADIIVGFGSGHHGDNYPFDGPGNILAHAFYPYEMNAYGGDIHFDEDENWKENSTHLGE 185
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
G A+HE+GH+LGL H Y +S+M
Sbjct: 186 GVDFYSVAIHELGHSLGLAHSPVY-------------------SSLM--------FPYYK 218
Query: 177 FGYCATPMVSDIVAVQKIYGA--------PKGSLGNN 205
T DI+A+ ++Y GN
Sbjct: 219 GITQGTLDYDDILAMYQLYSKWVGRDFLGNAFLTGNT 255
>gi|6573123|gb|AAF17559.1|AF201729_1 matrix metalloproteinase-13 [Canis lupus familiaris]
Length = 452
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 63/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 101 RTLKWSKTNLTYRIVNYTPDLTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGTA 153
Query: 78 DIKFISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGKGTILSHNA 124
DI + +D Y + +FD + W KG L A
Sbjct: 154 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 212
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D D + +
Sbjct: 213 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGD--EDPNPRHP 270
Query: 181 ATPMVSD 187
TP D
Sbjct: 271 KTPDKCD 277
>gi|26991602|ref|NP_747027.1| serine protease [Pseudomonas putida KT2440]
gi|24986692|gb|AAN70491.1|AE016690_7 serine protease, subtilase family [Pseudomonas putida KT2440]
Length = 1805
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 12/162 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGND 278
+ GG+D+L +GG + S I K I A ++I G D
Sbjct: 666 LIGGGGNDVL----VGGTGRNDIIGGTGKSVIYAGPKGDRIQASAGGSII---YAGGGAD 718
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQD 336
+ G +A++V G+ DG +G + + Y I R E+ ++ D A +
Sbjct: 719 RITGGAADDVIEAGRGDATIDGGAGTNLVSLHGAHDEYLITRTESGHLITDTVAGRDGRL 778
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
LS++++L FAD + + S E L D
Sbjct: 779 SLSNIQKLSFADIAAIDLLGGGAMPIGDRLSPEQLATFATTD 820
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 82/233 (35%), Gaps = 36/233 (15%)
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD----SPFIQTIYDS-----GG 227
P+ D ++ + G+P + +++Y + +P + D+ GG
Sbjct: 1376 NAVAGLPLTLDRWTLR-LVGSPGTT--DDVYYFTDDYANLVAENPGRAKLDDAISGTAGG 1432
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ L+ + + +DL + S S G +TIA +V ++++ G+D +I A
Sbjct: 1433 RNTLNAAAVSRSIS-VDLASGSASIAGAA---LTIAPGSV-QNLISGDGDDTLIAGPAGA 1487
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR------------------FENAIIVYD 329
+ G ++ G G D F + + + + F + + D
Sbjct: 1488 LLDGGRGYNLLKGGEGTDRFVIHRRAGGNDVLKQFETSREVIDLVGFGGSGFADLQMQQD 1547
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N D L ++L AD I + L+ + + ++
Sbjct: 1548 GNSTVLD-LGSGQKLTLADTTIAELRSANFRFLDAFTAAPGYFEGSPEEQTTP 1599
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 9/112 (8%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG L + + YI + + A ++++ GS+G+DV+
Sbjct: 526 GGTLLTSSSGPTSRRAYIS---------QSAQGSTLDAAALGVQTLYGSAGDDVLTAAPE 576
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G++ + G +G D F A + EH
Sbjct: 577 GSWLVGGGGSNTYHGGAGDDVFVISASDDWANMQGNGGRDTALIVGEHGVGL 628
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 44/205 (21%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL--------------TLIGGVKNYIDLNTES--WSSI 253
+ +QT+Y S GDD+L T GG + + + + S W+++
Sbjct: 550 STLDAAALGVQTLYGSAGDDVLTAAPEGSWLVGGGGSNTYHGGAGDDVFVISASDDWANM 609
Query: 254 GGYEK-------------------NMTIAQHTVIESVVGSSGND--VVIGNSANNVFFES 292
G +TIAQ + ++ S G + G S +++
Sbjct: 610 QGNGGRDTALIVGEHGVGLNMAKAGLTIAQGGRGKDIIASGGQRGVFIKGGSGDSLLIGG 669
Query: 293 SGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
GNDV G +G + A +I I+Y + + +
Sbjct: 670 GGNDVLVGGTGRNDIIGGTGKSVIYAGPKGDRIQASAGGSIIYAGGGADRITGGAADDVI 729
Query: 346 FADQCIDSVNVKQRSILEYTASYED 370
A + +++ + L D
Sbjct: 730 EAGRGDATIDGGAGTNLVSLHGAHD 754
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
AQ + +++ + G + G++ ++V + G G +T+ A ++ I +
Sbjct: 547 AQGSTLDAA--ALGVQTLYGSAGDDVLTAAPEGSWLVGGGGSNTYHGGAGDDVFVISASD 604
Query: 323 NAIIVYDANEHKQDFLSD 340
+ + +
Sbjct: 605 DWANMQGNGGRDTALIVG 622
>gi|297269064|ref|XP_001098000.2| PREDICTED: neutrophil collagenase [Macaca mulatta]
Length = 467
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 58/214 (27%), Gaps = 51/214 (23%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP D +L W + Y T D+ + + A W
Sbjct: 88 KPRCGVPDSGDFMLTPGNPKWERTNLTYSILNYTPQLSETDV-------EGAIKKAFEVW 140
Query: 63 SKVVDLTFEETSIH-SDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKAD 108
SK LTF S +DI +N P + +FD +
Sbjct: 141 SKASPLTFTRISQGQADINIAFFQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEE 200
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W L A HE GH+LGL H YP Y ++ S+
Sbjct: 201 TWT-KTSTNYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAF-----RETSNYSLP---- 250
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG
Sbjct: 251 -----------------QDDINGIQAIYGPSSNP 267
>gi|117647501|gb|ABK51704.1| matrix metalloproteinase 20 [Caiman crocodilus apaporiensis]
Length = 437
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 63/189 (33%), Gaps = 42/189 (22%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNG 87
++K + LT + + + + L WS L F + +DI
Sbjct: 67 KWKKNTLTYRVSKYTSSLSHAEVDKAVEMGLKAWSNAAPLNFVRANTGEADIMISFETGD 126
Query: 88 YVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + +D + +FD A+ W G G L A HE GHALGL
Sbjct: 127 HGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDSAEKWTMGTN-GFNLFTVAAHEFGHALGL 185
Query: 135 MHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H + YP Y + + + +P+D DI +QK
Sbjct: 186 GHSTDPSALMYPTYKYQSPFG----------FRLPKD----------------DIKGIQK 219
Query: 194 IYGAPKGSL 202
+YG K
Sbjct: 220 LYGPRKSGA 228
>gi|327242231|gb|AEA40854.1| matrix metalloproteinase-7 [Canis lupus familiaris]
Length = 230
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 67/190 (35%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W++ I Y+ T F + +L VA+ AL WSK + L+F +DI
Sbjct: 71 WTSEVITYRIASYTPDLPRFRVNQL------VAK-ALAMWSKEIPLSFRRVPRGTADIMI 123
Query: 82 ISSNNGYVCTPRYDSRY-------------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD+ + W G G A HE+
Sbjct: 124 GFARGAHGDYYPFDGPGNILAHAFAPGPDLGGDAHFDEDERWTDGSRIGINFLIAATHEL 183
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + VM P S+ D+ + DI
Sbjct: 184 GHSLGLGHSSDPDA-------------------VM---YPTYSIRDSKSFKLSQ---DDI 218
Query: 189 VAVQKIYGAP 198
+QK+YG
Sbjct: 219 EGIQKLYGGN 228
>gi|32476807|ref|NP_869801.1| matrix metalloproteinase 1 [Rhodopirellula baltica SH 1]
gi|32447353|emb|CAD77179.1| matrix metalloproteinase 1 [Rhodopirellula baltica SH 1]
Length = 635
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 46/132 (34%), Gaps = 19/132 (14%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW-ALGEWSKVVDLTFEETSIHS---- 77
W + T ++ + L + A A W+ V D+ F E
Sbjct: 42 WDGPGLGGAALTYT---ITGSPSTLTQEETDAAIETAFNAWASVADIDFTEVDQVGLNDS 98
Query: 78 -DIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH---NALH 126
DI F + + Y +R +I FD ++ W G G A+H
Sbjct: 99 IDISFENLDGRAGTLAQAYFPDDVNPARLAGDIQFDLSETWEVGNSLGNAAFDLVWVAVH 158
Query: 127 EIGHALGLMHPG 138
EIGH+LGL H
Sbjct: 159 EIGHSLGLDHTD 170
>gi|461769|sp|P28862|MMP3_MOUSE RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=EMS-2;
AltName: Full=Matrix metalloproteinase-3; Short=MMP-3;
AltName: Full=Transin-1; Flags: Precursor
gi|296168|emb|CAA47029.1| stromelysin-i [Mus musculus]
Length = 477
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 62/197 (31%), Gaps = 54/197 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI-- 79
W I Y+ T + AL W +V LTF S +DI
Sbjct: 109 WRKSHITYRIVNYTPDLPRQSV-------DSAIEKALKVWEEVTPLTFSRISEGEADIMI 161
Query: 80 KFISSNNG---------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
F +G Y P + + +FD + W + GT L A
Sbjct: 162 SFAVGEHGDFVPFDGPGTVLAHAYAPGPGING----DAHFDDDERWTEDV-TGTNLFLVA 216
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H +M Y + + S + F
Sbjct: 217 AHELGHSLGLYHSAKAEA-------------------LM-YPVYKSSTDLSRFHLSQ--- 253
Query: 185 VSDIVAVQKIYGAPKGS 201
D+ +Q +YG P S
Sbjct: 254 -DDVDGIQSLYGTPTAS 269
>gi|291390212|ref|XP_002711594.1| PREDICTED: matrix metalloproteinase 15 [Oryctolagus cuniculus]
Length = 668
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 64/209 (30%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + WSN + + T + ++ E R A W + L F+E
Sbjct: 125 YALTGRKWSNNHLTFSIQNYTEKLGWY-------HSMEAVRRAFRVWEQATPLVFQEVPY 177
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W
Sbjct: 178 EDIRLRRQREADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTSS 237
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + +M+ F
Sbjct: 238 STDLHGNSLFLVAVHELGHALGLEHSSNPSA-------------------IMAPFYQWMD 278
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D+ +Q++YG P G
Sbjct: 279 TDNFQ------LPEDDLRGIQQLYGTPDG 301
>gi|170739969|ref|YP_001768624.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
gi|168194243|gb|ACA16190.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
Length = 1795
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 7/150 (4%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESV 271
+++ G D L D L+GG + + L + G N + + +
Sbjct: 1625 GNDSLFGGAGADWLEGQAGDDALVGGEGDDV-LRGGEGNDWLDGEAGNDVLVGGAGNDGL 1683
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G G D ++G + ++ +G+DV G +G DT Y + + F D
Sbjct: 1684 RGGDGADWLVGEAGSDTLSGGAGDDVLFGGAGSDTVQYASGDGRDVVRDFVTGGAERDVI 1743
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
++ A Q + + V +
Sbjct: 1744 AFGPGLFGSFAAVQAATQQVGADAVITAGV 1773
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 23/182 (12%)
Query: 215 DSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+++ G+D L +L GGV N + G E N
Sbjct: 1568 GGDGSDSLFGGDGNDWLVGEAGDDALVGGQGSDSLFGGVGNDWLAGEGGDDLLIGGEGND 1627
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ + + G +G+D ++G ++V GND DG +G D A + +
Sbjct: 1628 SLFGGAGADWLEGQAGDDALVGGEGDDVLRGGEGNDWLDGEAGNDVLVGGAGNDGLRGGD 1687
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ++ E D LS A + ++ + D+++
Sbjct: 1688 GADWLV----GEAGSDTLSGG-----AGDDVLFGGAGSDTVQYASGDGRDVVRDFVTGGA 1738
Query: 381 ES 382
E
Sbjct: 1739 ER 1740
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 8/142 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N + + +SV G +G+D+V G+ ++V ND G +G D F A
Sbjct: 1349 TILGGAGNDFASGRSGNDSVSGEAGDDLVFGDEGDDVVDGGEDNDRVSGGAGADRVFGSA 1408
Query: 312 PSYLY-----KIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQ-RSILE 363
S L + + D +S + F D+ D ++ + R L
Sbjct: 1409 GSDLVFGEQGDDVVGAGEGNDFASGGAGNDSVSGEAGDDYVFGDEGDDQLSGGEGRDSLY 1468
Query: 364 YTASYEDLIQVIGQDVFESMKH 385
+ L G DV +
Sbjct: 1469 GGLGNDVLTGDAGHDVLLGEQD 1490
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 226 GGDDLLDLTLIGGVKNYI-----DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGND 278
GG+D ++ G DL +G E N + +SV G +G+D
Sbjct: 1388 GGEDNDRVSGGAGADRVFGSAGSDLVFGEQGDDVVGAGEGNDFASGGAGNDSVSGEAGDD 1447
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
V G+ ++ G D G G D A +
Sbjct: 1448 YVFGDEGDDQLSGGEGRDSLYGGLGNDVLTGDAGHDV 1484
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 42/129 (32%), Gaps = 14/129 (10%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G D + G + + + +G D DG G DT F + ++A++ D +
Sbjct: 1514 GNDGADGLWGGAGKDQLYGGAGADTLDGGDGADTLFGNEGADWMAGQAGDDALVGGDGS- 1572
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
+ L D V L + L +G D E G
Sbjct: 1573 ---------DSLFGGDGNDWLVGEAGDDALVGGQGSDSLFGGVGNDWLAGEGGDDLLIGG 1623
Query: 391 LSEGRDITF 399
EG D F
Sbjct: 1624 --EGNDSLF 1630
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 10/157 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + I V + G++ D + G + + +GND G SG D+
Sbjct: 1314 SDHDPLLARLAIP--VVGRLLTGTAAGDTLTGGAGEDTILGGAGNDFASGRSGNDSVSGE 1371
Query: 311 APSYL------YKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSIL- 362
A L + S L F +Q D V + +
Sbjct: 1372 AGDDLVFGDEGDDVVDGGEDNDRVSGGAGADRVFGSAGSDLVFGEQGDDVVGAGEGNDFA 1431
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
A + + G D + + EGRD +
Sbjct: 1432 SGGAGNDSVSGEAGDDYVFGDEGDDQLSGGEGRDSLY 1468
>gi|55637151|ref|XP_522163.1| PREDICTED: matrix metalloproteinase-27 [Pan troglodytes]
Length = 513
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 60/189 (31%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T E + L WSKV L F + S +DI
Sbjct: 106 WRKYNLTYRIINYTPDMAR-------AAVDEAIQEGLEVWSKVTPLKFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D Y + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPRK-YPLS--QDD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 ISGIQSIYG 261
>gi|157831037|pdb|1FBL|A Chain A, Structure Of Full-Length Porcine Synovial Collagenase
(Mmp1) Reveals A C-Terminal Domain Containing A Calcium-
Linked, Four-Bladed Beta-Propeller
Length = 370
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 62/183 (33%), Gaps = 28/183 (15%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W N + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 9 RWENTHLTYRIENYTPDLSREDV-------DRAIEKAFQLWSNVSPLTFTKVSEGQADIM 61
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A HE
Sbjct: 62 ISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNF-RDYNLYRVAAHE 120
Query: 128 IGHALGLMHPGSYNG---GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+GH+LGL H +Y D D + + + P ++ + S TP
Sbjct: 121 LGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDID-GIQAIYGPSENPVQPSG--PQTPQ 177
Query: 185 VSD 187
V D
Sbjct: 178 VCD 180
>gi|302878662|ref|YP_003847226.1| outer membrane adhesin like proteiin [Gallionella capsiferriformans
ES-2]
gi|302581451|gb|ADL55462.1| outer membrane adhesin like proteiin [Gallionella capsiferriformans
ES-2]
Length = 2854
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 65/189 (34%), Gaps = 19/189 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEK 258
G+ GN I IE D + I G+D++D GG + + L + + G
Sbjct: 1607 GNNGNTI--IEAMAGDDVVMSDI----GNDMID----GGAGSDL-LYAGDGNDLVIGGTG 1655
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + V+G G+D ++G N+V F +GND+ G G + A
Sbjct: 1656 DDVVFAGLGDDVVLGGDGHDALLGEGGNDVMFGGAGNDMLSGGDGNNVLSGDAGDDQ--- 1712
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCID---SVNVKQRSILEYTASYEDLIQVI 375
+ D LS +E D Q L A + LI
Sbjct: 1713 -VYGGTANDALFGGTGTDELSGMEGYDRLDGGAGNDLLDGGAQDDALFGGAGDDTLIGGA 1771
Query: 376 GQDVFESMK 384
G D +
Sbjct: 1772 GNDTLDGGA 1780
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 65/207 (31%), Gaps = 13/207 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D + GG N + G E + + + G + +D + G + ++
Sbjct: 1707 DAGDDQVYGGTANDALFGGTGTDELSGMEGYDRLDGGAGNDLLDGGAQDDALFGGAGDDT 1766
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+GND DG +G DT+ + + E V + ++E L D
Sbjct: 1767 LIGGAGNDTLDGGAGNDTYRVDSQGDVVTENINEGVDTVQSVINYTLGD--NIENLTLTD 1824
Query: 349 ---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDI 397
I+ +I+ + L G D Y F L +G D
Sbjct: 1825 PSSGSGQALADINGTGNALDNIITGNSGNNLLNGGRGADTLNGGAGNDTYLFNLGDGADT 1884
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAAR 424
DS + V G+ AA
Sbjct: 1885 IIDSAMSAAGAGINTLVLGAGITAAMS 1911
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S GY + +++ S GN+++IG + + S+GN++F G +G DT
Sbjct: 2601 SFAFGYAGYDILQGGNGNDALTDSGGNNLLIGGAGADTLTGSTGNELFAGGAGNDTITTG 2660
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + + R + +V + + +S + +AD + V+
Sbjct: 2661 SGADVIAFNRGDGMDVV-NGGVGTDNVVSLGRGINYADLALSKVSNN 2706
Score = 43.6 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 36/134 (26%), Gaps = 44/134 (32%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+LG+NI + + S Q + D G
Sbjct: 1810 NYTLGDNIENLTLTDPSSGSGQALADINGT------------------------------ 1839
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+++++ NS NN+ G D +G +G DT+ + I
Sbjct: 1840 ------GNALDNIITG--------NSGNNLLNGGRGADTLNGGAGNDTYLFNLGDGADTI 1885
Query: 319 YRFENAIIVYDANE 332
+ N
Sbjct: 1886 IDSAMSAAGAGINT 1899
Score = 40.9 bits (94), Expect = 0.78, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 54/194 (27%), Gaps = 37/194 (19%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
ID T + G +A G + ++ +SGND GS
Sbjct: 2225 IDPATGRLNGTAGMGDLGALAIRLTATDT-GGLSATTDFNMTVASMITGTSGNDTLFGSY 2283
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------------EHKQD 336
G D + + A S IY F + A D
Sbjct: 2284 GDDVYLFSAGSGQDTIYDFGGIDTIRLAGLNPSQVSYARELGNNGWPTYDLVIKVNGTSD 2343
Query: 337 FLS----------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
L +E+ F D + S+ AS D + G + + +
Sbjct: 2344 SLRIVNYYINPVFQIEKFVFDDGTVLGTAEMNVSVFNLRASSNDSVVRGGNNGNSNDTYL 2403
Query: 387 YEFGLSEGRDITFD 400
+ G + + + FD
Sbjct: 2404 FGIGSGQDKILDFD 2417
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 15/178 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D L + N + + ++ G N A +++ SG DV+ N
Sbjct: 2615 GNGNDALTDSG----GNNLLIGGAGADTLTGSTGNELFAGGAGNDTITTGSGADVIAFNR 2670
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFY---YAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ G DV +G G D + + N +I+ N + F +
Sbjct: 2671 GD-------GMDVVNGGVGTDNVVSLGRGINYADLALSKVSNNLILEVGNGEQITFANWY 2723
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ ++ + + V ++ + A+ D + F F + G TF
Sbjct: 2724 DT-TANNKSVLDLQVMADAMAGFNATSTDPLLNQAVQNFNFTAVANAFDQARGTSATF 2780
>gi|118085143|ref|XP_425644.2| PREDICTED: similar to Stromelysin-1 precursor (Matrix
metalloproteinase-3) (MMP-3) (Transin-1) (SL-1) [Gallus
gallus]
Length = 447
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 61/198 (30%), Gaps = 51/198 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W+ + Y+ T D+ + A WS V L F + +DI
Sbjct: 143 WAKQVLTYRILNYTPDLRPADVN-------AAIKKAFSIWSSVTPLKFIKRDRGDADIMI 195
Query: 82 ISSNNGY-------------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ G+ + + +FD+ + W +G L + A HE
Sbjct: 196 SFATGGHNDFIPFDGPGGSVAHAYAPGKDFGGDAHFDEDETWTKST-EGANLFYVAAHEF 254
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM-VS 186
GH+LGL H N YP+Y F P+
Sbjct: 255 GHSLGLFHSKEPNALMYPIYR---------------------------KFDPSVFPLHQD 287
Query: 187 DIVAVQKIYGAPKGSLGN 204
DI +Q +YG + +
Sbjct: 288 DINGIQSLYGPSPNTSND 305
>gi|293597556|ref|NP_598207.2| stromelysin-1 preproprotein [Rattus norvegicus]
gi|149020729|gb|EDL78534.1| rCG31785, isoform CRA_a [Rattus norvegicus]
gi|149020730|gb|EDL78535.1| rCG31785, isoform CRA_a [Rattus norvegicus]
Length = 475
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 61/191 (31%), Gaps = 46/191 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W I Y+ T + AL W +V LTF S +DI
Sbjct: 107 WRKNHISYRIVNYTLDLPRESV-------DSAIERALKVWEEVTPLTFSRISEGEADIMI 159
Query: 82 ISSNN-----------GYVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHEI 128
+ G V Y + + +FD + W + GT L A HE+
Sbjct: 160 SFAVEEHGDFIPFDGPGMVLAHAYAPGPGINGDAHFDDDERWTDDV-TGTNLFLVAAHEL 218
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +M Y + + S A F D+
Sbjct: 219 GHSLGLFHSANAEA-------------------LM-YPVYKSSTDLARFHLSQ----DDV 254
Query: 189 VAVQKIYGAPK 199
+Q +YG P
Sbjct: 255 DGIQSLYGPPT 265
>gi|256829656|ref|YP_003158384.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256578832|gb|ACU89968.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 4800
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 65/176 (36%), Gaps = 9/176 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVG 273
+I GG D +D + +IDL+ + + + A + I++V+G
Sbjct: 3579 GGADSIDGGGGIDTVDYS-ASTAGVHIDLSRQDGLTAQSGGADGNHADGDILRNIQNVIG 3637
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-----Y 328
SS ND + G+ NNV G D +G ++T Y A + I +
Sbjct: 3638 SSYNDTLTGDIGNNVLSGLGGADSINGGGAINTVDYSASTAGVHIDLSRQDGLTAQSGGA 3697
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D N D L +++ + + + ++L + ++ G D +
Sbjct: 3698 DGNHADGDILQNIQNVIGSSYNDTLIGDGNANVLSGLGGADSIVGGDGIDTVDYRA 3753
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 64/187 (34%), Gaps = 23/187 (12%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-------------- 262
+ G D D +L +DL+ + + GG TI
Sbjct: 4347 AGADILDGGDGIDTADYSL-SEANVRVDLSQATAQTGGGSVMTETILDRNGDEWKIIYTG 4405
Query: 263 --AQHTV---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
A V IE+V+GSS +D +IG+ NV G D DG G+DT Y A
Sbjct: 4406 NHAAGDVLIGIENVIGSSYDDTLIGDGNANVLSGLGGADSIDGGGGIDTADYSASGAAVT 4465
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + Y + + D L+ +E + ++ + L + L G
Sbjct: 4466 M---DLRYGTYKGGDAEGDSLTGIENVIGSNFNDTITGSNGSNYLYGMDGNDALAAAYGA 4522
Query: 378 DVFESMK 384
D +
Sbjct: 4523 DTLDGGA 4529
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 12/176 (6%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGG---VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ G+D D + G V I + S G ++ I IE+V+G
Sbjct: 3504 AGNDTLDGGTGNDTADYSTSGSGVHVVLTIQDGVTAQSGTGDAAGDVLIG----IENVIG 3559
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-----Y 328
SS +D +IG+S NV G D DG G+DT Y A + I +
Sbjct: 3560 SSYDDTLIGDSNANVLSGLGGADSIDGGGGIDTVDYSASTAGVHIDLSRQDGLTAQSGGA 3619
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D N D L +++ + + ++L + + + +
Sbjct: 3620 DGNHADGDILRNIQNVIGSSYNDTLTGDIGNNVLSGLGGADSINGGGAINTVDYSA 3675
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 5/146 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSIGGYEKNMT 261
+++Y GG D+ +++++ T + + +GG E N
Sbjct: 1837 DDSLYGFAGNDLLHGGAGADLLDGGTGT-DMADYHDSATWVNVDLTLATAQVGGGEGNHA 1895
Query: 262 IAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ V IE+V GS +D + GN +NV G D G G DT A + +Y
Sbjct: 1896 LGDTLVSIENVTGSQYDDSITGNGWHNVLDGGDGADTLYGGGGYDTLNGGAGND--SLYG 1953
Query: 321 FENAIIVYDANEHKQDFLSDVERLRF 346
+ A D L F
Sbjct: 1954 GDGAFYDNMNGGAGDDTLDGGAGHDF 1979
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 5/127 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK----NMTIAQH 265
T+ G D +D IDLN +GG + +
Sbjct: 1455 NDWLHGWTGADTLNGGDGIDTVDYA-DAYTWVKIDLNLTGAQGLGGRDGEGHNDALDDVL 1513
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+V GS D ++GN+ +N +GND DG SG DT ++I
Sbjct: 1514 VSIENVRGSRYGDSLVGNAEDNKLEGLAGNDTLDGRSGNDTLDGATGHDTLDGGVGNDSI 1573
Query: 326 IVYDANE 332
I + N+
Sbjct: 1574 IGGEGND 1580
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVG 273
+I G + +D + +IDL+ + + + A + I++V+G
Sbjct: 3657 GGADSINGGGAINTVDYS-ASTAGVHIDLSRQDGLTAQSGGADGNHADGDILQNIQNVIG 3715
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SS ND +IG+ NV G D G G+DT Y A + + DA
Sbjct: 3716 SSYNDTLIGDGNANVLSGLGGADSIVGGDGIDTVDYRASNEAVTMDLRYGTCKGGDAEG- 3774
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L+ +E + ++ + L + L G D +
Sbjct: 3775 --DSLTGIENVFGSNFNDTITGSNGSNYLFGMDGNDSLAAAYGDDTLDGGA 3823
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 59/201 (29%), Gaps = 37/201 (18%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + I+ ++ S +D + + + G + N ++A
Sbjct: 3769 GGDAEGDSLTGIENVFGSNFNDTITGSNGSNY-------------LFGMDGNDSLAAAYG 3815
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G +GND + G N+ GND G DT S L +++I
Sbjct: 3816 DDTLDGGAGNDTLRGARDKNLLLGGDGNDSLYGQGNNDTLDGEDGSDLLDGGTGADSLIG 3875
Query: 328 YDANEHKQ------------------------DFLSDVERLRFADQCIDSVNVKQRSILE 363
D + D L+ +E + ++ + L
Sbjct: 3876 GDGIDTVDYRASNEAVTMDLRYGTCKGGDAEGDSLTGIENVFGSNFNDTITGSNGSNYLF 3935
Query: 364 YTASYEDLIQVIGQDVFESMK 384
+ L G D +
Sbjct: 3936 GMDGNDSLAAAYGDDTLDGGA 3956
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-T 266
+ + T+ G D +D N +DLN + + +GG + N + T
Sbjct: 2506 GGDDTLRGGVHADTLDGGAGVDTVDYHASATWVN-VDLNLAT-AQVGGGDGNHALGDVLT 2563
Query: 267 VIESVVGSSG---NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE++ G++ DV+ GN+ NN+ GND + G DT A + L +
Sbjct: 2564 GIENLTGTNDTLHGDVLTGNTGNNLLSGLDGNDTINAGLGNDTLVGGAGADLLDGGAGTD 2623
Query: 324 AIIVYDANEHKQDFLS 339
+D+ LS
Sbjct: 2624 MADYHDSTTWVNVDLS 2639
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 21/186 (11%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVK-NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T+ G+D D + +DL + + GG + T IE+++G++
Sbjct: 3001 AGADTLDGGDGNDTADYSASTSTSWVNVDLTLATAQTDGGAGNHALGDVLTGIENLIGTN 3060
Query: 276 G---NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN- 331
DV+ GN N+ G D G G DT A + + Y A+
Sbjct: 3061 DLAHGDVLTGNDRANILSGLDGADTLIGGKGNDTLIGGAGADSLAGGLGILDMADYSAST 3120
Query: 332 ----------------EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + D + V + + + +D+ +
Sbjct: 3121 AWVNVDLRIQDGATAQSGGGTDSAGQDNHALGDTLLGIEGVTGSNYNDVLSGNKDINLIY 3180
Query: 376 GQDVFE 381
G D +
Sbjct: 3181 GLDGDD 3186
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 65/196 (33%), Gaps = 15/196 (7%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-------LNTESWSSI 253
+ G + I T+ G+D L GG + L+ + +
Sbjct: 1365 TTGGGT-SSDAWGDTLTGITTLIGGIGNDTLIGFDFGGPAAMLLGGDGDDVLHANAVTYY 1423
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N T+ +++ G+ G D +IG + N+ +G D +G G+DT Y
Sbjct: 1424 YIGASN-TLDGGAGNDTLGGAGGRDSLIGGTGNDWLHGWTGADTLNGGDGIDTVDYADAY 1482
Query: 314 YLYKIYRFENAIIVYDANEHK------QDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
KI + + D L +E +R + V + + LE A
Sbjct: 1483 TWVKIDLNLTGAQGLGGRDGEGHNDALDDVLVSIENVRGSRYGDSLVGNAEDNKLEGLAG 1542
Query: 368 YEDLIQVIGQDVFESM 383
+ L G D +
Sbjct: 1543 NDTLDGRSGNDTLDGA 1558
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 54/171 (31%), Gaps = 23/171 (13%)
Query: 204 NNIYKIEVQQKD-SPFIQTIYD----SGGDDLLDLTLIGGVKNYIDLNTESWSSIG---- 254
+ +Y + + P T +D GDD+LD D N + +
Sbjct: 856 DTLYGGDASNIEWIPGYYTDWDLLDGGAGDDVLDGGRGADTLYGGDGNDSLYGGVSTPYQ 915
Query: 255 --------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
G N T+ ++++G ND ++G N+V +G+D G
Sbjct: 916 PYKTWLRADNDLLDGGAGNDTLDGGVGNDTLMGGEDNDSMMGGDGNDVLMGDAGDDTLVG 975
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G DT A+ + + + S E AD I
Sbjct: 976 GVGKDTLNGGEDVNTVDYSASTKAVRIDLNQQDGKAAQSGGEAENHADGDI 1026
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Query: 252 SIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S+ G + N ++ +++ G +GND + G + +GNDV G +G D
Sbjct: 2205 SLLGGDGNDSLYGGNEAWNDTLDGGAGNDTLDGGEGKDSLDGGAGNDVLIGGAGADFIDG 2264
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+ A+ + + + S E AD I
Sbjct: 2265 GSGVNTVDYSASTKAVRIDLNQQDGKAAQSGGEAENHADGDI 2306
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 44/148 (29%), Gaps = 32/148 (21%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------------------------ 252
+I GG D D + G +DL ++
Sbjct: 4441 GGADSIDGGGGIDTADYS-ASGAAVTMDLRYGTYKGGDAEGDSLTGIENVIGSNFNDTIT 4499
Query: 253 -------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + N +A +++ G +GND + G N+ G+D G D
Sbjct: 4500 GSNGSNYLYGMDGNDALAAAYGADTLDGGAGNDTLRGARDKNLLLGGDGDDRLYGQGNND 4559
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEH 333
T A + L +A ++
Sbjct: 4560 TLAGGAGADLLDGGTGVDAADFSASSAW 4587
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 63/196 (32%), Gaps = 36/196 (18%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + I+ ++ S +D + + + G + N ++A
Sbjct: 3902 GGDAEGDSLTGIENVFGSNFNDTITGSNGSNY-------------LFGMDGNDSLAAAYG 3948
Query: 268 IESVVGSSGNDV------------------VIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+++ G +GND + G N+ +G D+ DG +G+DT Y
Sbjct: 3949 DDTLDGGAGNDTLWGAKDKNLLLGGDGDDRLYGQGNNDTLAGGAGADLLDGGTGVDTADY 4008
Query: 310 YAPSYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEY 364
A S I D N D L +E++ + + +++
Sbjct: 4009 SANSAWVNIDMSLATAQTGGGDGNHALGDTLVSIEQIIGTNDTTHGDVLIGDGGDNLISG 4068
Query: 365 TASYEDLIQVIGQDVF 380
A + + G D
Sbjct: 4069 GAGDDTIHGGAGFDSI 4084
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 6/137 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I N + ++++ GND + G N+ + +D G G DT +
Sbjct: 803 GIYDGGNNGVMDGGAGNDTLLSDGGNDTLYGRDGNDFLDGGTNSDHLIGGDGNDTLYGGD 862
Query: 312 PSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY----T 365
S + I + + D A + D + L D Y
Sbjct: 863 ASNIEWIPGYYTDWDLLDGGAGDDVLDGGRGADTLYGGDGNDSLYGGVSTPYQPYKTWLR 922
Query: 366 ASYEDLIQVIGQDVFES 382
A + L G D +
Sbjct: 923 ADNDLLDGGAGNDTLDG 939
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 12/151 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGSSGND 278
I G + +D + IDLN + + + A + I +V+G++G D
Sbjct: 2262 IDGGSGVNTVDYS-ASTKAVRIDLNQQDGKAAQSGGEAENHADGDILQNIRNVIGTAGAD 2320
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+IG+S NV GND+ +G DT A + ++ D Q +
Sbjct: 2321 TLIGDSQANVLDGRDGNDIITAGAG-DTVVGGAGND-----VLHSSDTALDIAHSTQ--I 2372
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ VERL + A
Sbjct: 2373 TGVERLDLTGSASSLTVNGDAILNNGVADPA 2403
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 29/194 (14%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-T 266
+ + T+ G D +D +DLN + + +GG + N + T
Sbjct: 1226 GGDDTLRGGVHADTLDGGLGTDAVDY-HASATWVKVDLNLAT-AQVGGGDGNHALGDVLT 1283
Query: 267 VIESVVGS---------------------SGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
IE++ GS +GND + G + N+ +G D+ DG +G +
Sbjct: 1284 GIENLTGSNDTTHGDVLSGNALNNELHGLAGNDTLRGGAGNDTLMGGAGADLLDGGAGSN 1343
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ---DFLSDVERLR--FADQCIDSVNVKQRS 360
T Y + + + +N D L+ + L + + + +
Sbjct: 1344 TADYSSSTTGVYVNLDQNGAQTTGGGTSSDAWGDTLTGITTLIGGIGNDTLIGFDFGGPA 1403
Query: 361 ILEYTASYEDLIQV 374
+ +D++
Sbjct: 1404 AMLLGGDGDDVLHA 1417
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIE 269
+ F GD D++ G Y+DLN + + + A T I
Sbjct: 2806 NGTNTFANYQLTGHGD--FDVSYQGV---YLDLNIQDGVTAQTGKSGGDDATGDILTGIV 2860
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
GS+G+D +IGN N + GND+ G G D + + +
Sbjct: 2861 HAAGSNGSDTLIGNHQANAMAGNDGNDLMIGGDGDDILYGHGGNNT 2906
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 55/150 (36%), Gaps = 14/150 (9%)
Query: 225 SGGDD--LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGSSGNDV 279
+GG+D +D + IDLN + + + A + I +V+G++G D
Sbjct: 983 NGGEDVNTVDYS-ASTKAVRIDLNQQDGKAAQSGGEAENHADGDILQNIRNVIGTAGADT 1041
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+IG+S NV GND+ +G DT A + ++ D Q ++
Sbjct: 1042 LIGDSQANVLDGRDGNDIITAGAG-DTVVGGAGND-----VLHSSDTALDIAHSTQ--IT 1093
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYE 369
VERL + A
Sbjct: 1094 GVERLDLTGSASSLTVNGDAILNNGVADPA 1123
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 60/200 (30%), Gaps = 24/200 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + T+ G D +D N +DLN + GG + T
Sbjct: 1748 GGDDTLRGGVHADTLDGGLGTDAVDYHASATWVN-VDLNLATAQIDGGTNNHAAGDVLTG 1806
Query: 268 IESVVGSSG---NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE + G++ DV+ GN NN G+D G +G D A + L +
Sbjct: 1807 IEILTGTNDTTHGDVLSGNGLNNELHGLLGDDSLYGFAGNDLLHGGAGADLLDGGTGTDM 1866
Query: 325 IIVYDA--------------------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+D+ N D L +E + + ++L+
Sbjct: 1867 ADYHDSATWVNVDLTLATAQVGGGEGNHALGDTLVSIENVTGSQYDDSITGNGWHNVLDG 1926
Query: 365 TASYEDLIQVIGQDVFESMK 384
+ L G D
Sbjct: 1927 GDGADTLYGGGGYDTLNGGA 1946
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
T I + +GS G+D +IGN N + + GN++ G G D+
Sbjct: 3357 TGIVNALGSYGHDTLIGNDQGNDMYGNGGNNLLIGGDGNDSLRGDINDDTLD 3408
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T I + VGS G+D +IGN N GND+ G G D+ + + + E+
Sbjct: 4200 TGIVNAVGSYGHDTLIGNDQGNDMNGLDGNDLMIGGVGNDSLWGVNNNDTLEGGLGED 4257
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 4/110 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ G D D + N ID++ + + GG +
Sbjct: 3983 GNNDTLAGGAGADLLDGGTGVDTADYSANSAWVN-IDMSLATAQTGGGDGNHALGDTLVS 4041
Query: 268 IESVVGSSG---NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
IE ++G++ DV+IG+ +N+ +G+D G +G D+
Sbjct: 4042 IEQIIGTNDTTHGDVLIGDGGDNLISGGAGDDTIHGGAGFDSILGGDGDD 4091
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 14/140 (10%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDL--------TLIGGVKNYIDLNTESWSS-IGGYEKNMTI 262
T+Y G+D L + + + G L + G + N ++
Sbjct: 478 TLHGGQGNNTLYGGAGNDSLSVNLSYINYRSFLDGGDGDDTLIGGFGRDTLYGGDGNDSM 537
Query: 263 AQHTVIESVV-----GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ E G +GND ++ + N+ + GND DG + D +
Sbjct: 538 IAGGMYEGGHHEVMDGGAGNDTLLSDGGNDTLYGRDGNDFLDGGTNSDHLIGGDGNDTLY 597
Query: 318 IYRFENAIIVYDANEHKQDF 337
N + + + D+
Sbjct: 598 GGDASNIEWILFSPGYYTDW 617
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 22/143 (15%)
Query: 203 GNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ IY K D + TIY GDDL+ + + I G + N
Sbjct: 3185 DDTIYGDPDNTKPKDDVAHVDTIYGGAGDDLIYGSAFEDM-------------IYGGDGN 3231
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANN------VFFESSGNDVFDGSSGLDTFFYYAPS 313
TI+ +S++G GND +IG +++ + +G+D DGS DT
Sbjct: 3232 DTISGGGDYDSILGGEGNDRLIGYYSSDKDEHQDLLIGGAGDDTLDGSRNSDTSMGILNG 3291
Query: 314 YLYKIYRFENAIIVYDANEHKQD 336
+ + + N + + E D
Sbjct: 3292 GMGADHIYGNGVNTMVSYERTGD 3314
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 16/158 (10%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY--------IDLNT 247
G+ GNN+ T+ G DLLD + +Y +DL+
Sbjct: 2581 TGNTGNNLLSGLDGNDTINAGLGNDTLVGGAGADLLDGGAGTDMADYHDSTTWVNVDLSL 2640
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSG---NDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + GG + T IE+++G++ DV+ GN +N +GND G +
Sbjct: 2641 ATAQTGGGDGNHAQDDVLTGIENLIGTNDLAHGDVLTGNGVSNFMNGGAGNDTIYGGNAR 2700
Query: 305 DTFF--YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
DT + ++ D +
Sbjct: 2701 DTIYGGDGDDWIDGGVHDDSIYDDDSIYGGAGNDTIYG 2738
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 2/110 (1%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH--K 334
++++ G +++ +GND DG +G DT Y + + +
Sbjct: 3488 HNLLQGRGGDDILSGLAGNDTLDGGTGNDTADYSTSGSGVHVVLTIQDGVTAQSGTGDAA 3547
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L +E + + + ++L + + G D +
Sbjct: 3548 GDVLIGIENVIGSSYDDTLIGDSNANVLSGLGGADSIDGGGGIDTVDYSA 3597
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 18/124 (14%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L G N + + + + G + T+ +S++G GND ++G+ N+ +G
Sbjct: 398 LTGSNFNDVLIGDGQANILNGLVGDDTLYGGAGNDSMMGGDGNDSMMGDGGNDTLISEAG 457
Query: 295 ND------------------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D G G +T + A + + + D
Sbjct: 458 HDILYGGGGDDSLDGGDGNDTLHGGQGNNTLYGGAGNDSLSVNLSYINYRSFLDGGDGDD 517
Query: 337 FLSD 340
L
Sbjct: 518 TLIG 521
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 55/186 (29%), Gaps = 26/186 (13%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y G GN+ + D F + GDD LD GG + L + S+
Sbjct: 1939 YDTLNGGAGND----SLYGGDGAFYDNMNGGAGDDTLD----GGAGHDFLLGGDGNDSLY 1990
Query: 255 GYEKNMTIAQHTVI-----------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
G E+N +S++G GND + G + GND G G
Sbjct: 1991 GGERNFADTLDGGDGDDTLDGGEDRDSLLGGDGNDSLDGGYDRDTMDGGDGNDSLYGGDG 2050
Query: 304 L--DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
D A A + D L ER FAD
Sbjct: 2051 AFYDNMNGGAGDDTLD----GGAGEDFLLGGDGNDSLYGGER-NFADTLDGGDGDDTLDG 2105
Query: 362 LEYTAS 367
EY S
Sbjct: 2106 GEYRDS 2111
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 6/148 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G +LG+ + IE + + + G+ ++L + I + ++
Sbjct: 3145 GQDNHALGDTLLGIEGVTGSN-YNDVL---SGNKDINLIYGLDGDDTIYGDPDNTKPKDD 3200
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--FYYAPS 313
TI + + GS+ D++ G N+ D G G D +Y +
Sbjct: 3201 VAHVDTIYGGAGDDLIYGSAFEDMIYGGDGNDTISGGGDYDSILGGEGNDRLIGYYSSDK 3260
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDV 341
++ A D +
Sbjct: 3261 DEHQDLLIGGAGDDTLDGSRNSDTSMGI 3288
Score = 44.3 bits (103), Expect = 0.068, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 50/190 (26%), Gaps = 53/190 (27%)
Query: 204 NNIYKIEVQQKD----SPFIQTIYD----SGGDDLLDLTLIGGVKNYIDLNTESWSS--- 252
+ +Y + + SP T +D GDD+LD D N +
Sbjct: 594 DTLYGGDASNIEWILFSPGYYTDWDLLDGGAGDDVLDGGRGADTLYGGDGNDSLYGGDST 653
Query: 253 ---------------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND- 296
+ G N T+ ++++G ND ++G N+ GND
Sbjct: 654 PYQPYKTWLRADNDLLDGGAGNDTLDGGAGKDTLMGGEDNDSMMGGDGNDSMMGDGGNDT 713
Query: 297 --------------------------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G G +T + A + + +
Sbjct: 714 LISEAGHDILYGGDGDDSLDGGDGNDTLHGGQGNNTLYGGAGNDSLSVNLSYINYRSFLD 773
Query: 331 NEHKQDFLSD 340
D L
Sbjct: 774 GGDGDDTLIG 783
Score = 44.0 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 4/181 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S + IG ++ N +A + + ++G G+D++ G+ NN D G G D
Sbjct: 2866 NGSDTLIGNHQAN-AMAGNDGNDLMIGGDGDDILYGHGGNNTLEGGLAADALLGDLGEDI 2924
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y + + E D L ++ L ++ D++ + +
Sbjct: 2925 ASYEHAASGVNVSLEIQGRRQVGTGEENGDELYHMDGLYGSNHN-DTLTGCNTQYSDSGS 2983
Query: 367 SYEDLIQVIGQDVFESM--KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + G D+ + + G S DL G A
Sbjct: 2984 VHNRIQGRGGDDILAGLAGADTLDGGDGNDTADYSASTSTSWVNVDLTLATAQTDGGAGN 3043
Query: 425 H 425
H
Sbjct: 3044 H 3044
Score = 44.0 bits (102), Expect = 0.083, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 12/158 (7%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE--------SVVGSSGNDVVIGNSANNVF 289
D+ T +++G Y + I + ++G GND + G+ ++
Sbjct: 3348 ATDATGDILTGIVNALGSYGHDTLIGNDQGNDMYGNGGNNLLIGGDGNDSLRGDINDDTL 3407
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKI---YRFENAIIVYDANEHKQDFLSDVERLRF 346
G D+ G G D Y + + + N + E D L ++ L +
Sbjct: 3408 DGGLGADLIWGWKGDDIASYENAASGVNVDLRIQNVNGLTQQGNGEEDGDELWYMDGL-Y 3466
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D++ + +Y + + L G D+ +
Sbjct: 3467 GSAFNDTLTGRDTDDPDYMSIHNLLQGRGGDDILSGLA 3504
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 36/117 (30%), Gaps = 7/117 (5%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDANEHKQDFLS 339
G ++ D DG G D Y+A + K+ V D N D L+
Sbjct: 1224 GLGGDDTLRGGVHADTLDGGLGTDAVDYHASATWVKVDLNLATAQVGGGDGNHALGDVLT 1283
Query: 340 DVERLRFADQCI---DSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGL 391
+E L ++ + L A + L G D + + + G
Sbjct: 1284 GIENLTGSNDTTHGDVLSGNALNNELHGLAGNDTLRGGAGNDTLMGGAGADLLDGGA 1340
Score = 42.0 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 9/151 (5%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDANEHKQDFLS 339
G ++ D DG +G+DT Y+A + + V D N D L+
Sbjct: 2504 GLGGDDTLRGGVHADTLDGGAGVDTVDYHASATWVNVDLNLATAQVGGGDGNHALGDVLT 2563
Query: 340 DVERLRFADQCI---DSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
+E L + + ++L + + +G D V + + G
Sbjct: 2564 GIENLTGTNDTLHGDVLTGNTGNNLLSGLDGNDTINAGLGNDTLVGGAGADLLDGGAGTD 2623
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
DS ++ DL G H
Sbjct: 2624 MADYHDSTTWV--NVDLSLATAQTGGGDGNH 2652
>gi|241204477|ref|YP_002975573.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858367|gb|ACS56034.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 759
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 19/185 (10%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I G D GGV ++L T + S IE++ G
Sbjct: 548 SGGAGGDVINGGTGQDTAGYAGSGGVN--VNLATGAASGGHATGDKF-----VSIENLTG 600
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----- 328
SS NDV+ GNS +NV +G D +G +G D A + + +
Sbjct: 601 SSYNDVLTGNSGSNVLDGGAGADKLNGGAGTDVIIGGAGKDIMTGGVSADTFVFKAPTEI 660
Query: 329 ---DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ DF V+++ F+ ID+ Q + + + ED H
Sbjct: 661 GSGSNRDVITDFQHGVDKMDFS--AIDANGSAQGNGTFHFLAQED--ASFDHKAGALAWH 716
Query: 386 FYEFG 390
+ +
Sbjct: 717 YEDKA 721
>gi|300865386|ref|ZP_07110195.1| hypothetical protein OSCI_1680008 [Oscillatoria sp. PCC 6506]
gi|300336621|emb|CBN55345.1| hypothetical protein OSCI_1680008 [Oscillatoria sp. PCC 6506]
Length = 2055
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 22/191 (11%)
Query: 196 GAPKGSLGNNIY----KIEVQQKDSPFIQTIYDSGGDDLLDLT----LIGGVKNYIDLNT 247
G P+ +L ++Y I+ S TI+ G D L + G + +L
Sbjct: 1839 GLPENTLLGDVYLLTDGIDTSIPSSVLDLTIFALSGSDSLTGSELPNTYFGNQGEDNLVG 1898
Query: 248 ESWSS----------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + G N ++ + + ++G GND + G ++V +GND+
Sbjct: 1899 KGGDDQLFGGKGSDSLDGGIDNDFVSGNNGNDLLLGGDGNDTLRGGKQDDVLSGGAGNDL 1958
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G +G D + + + N D + DF SD ++++ + +
Sbjct: 1959 LNGDAGFDVLTGGEGNDTFVLEYLPN---NPDRADAIADFTSD-DKIQLIGVTFSELTFE 2014
Query: 358 QRSILEYTASY 368
+++ A+
Sbjct: 2015 SVNVVLDGANA 2025
>gi|332706925|ref|ZP_08426985.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332354190|gb|EGJ33670.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 457
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 16/140 (11%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
GG I L + G E N + + + V G SGND V G+S N++ SG
Sbjct: 101 GRGGNDIIIALGGNDL--VFGEEGNDIVIAGSGNDFVSGGSGNDFVFGSSGNDILDGGSG 158
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--------------VYDANEHKQDFLSD 340
ND G +G + F + + + +++ + + + QD L
Sbjct: 159 NDSLFGGTGKNHFIGSSGNDVLDGEEGNDSVDYTGLGRAITLLPTGIVNKSGLGQDTLIR 218
Query: 341 VERLRFADQCIDSVNVKQRS 360
VE + ++++
Sbjct: 219 VETIIGDAGQANTIDASSAG 238
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 60/311 (19%), Positives = 102/311 (32%), Gaps = 56/311 (18%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
DL F E +DI S N +V + F D+ G G ++
Sbjct: 115 DLVFGE--EGNDIVIAGSGNDFVSGGSGNDFVFGS---SGNDILDGGSGNDSLFGGT--- 166
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G H + G +D + NDS + G T + +
Sbjct: 167 ------GKNH---FIGSSGNDVLDGEEGNDSVDYT--------------GLGRAITLLPT 203
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-GVKNYIDL 245
IV K LG + I D+G + +D + G G ++L
Sbjct: 204 GIV--------NKSGLGQDT--------LIRVETIIGDAGQANTIDASSAGTGASVNVNL 247
Query: 246 --NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
N+ + + G N T+ +V G+ ND +IG++ +N +G+D G G
Sbjct: 248 QQNSLQINVVNGPVLNRTVQNFV---NVKGAGRNDTIIGDNNSNQLTGGAGSDNITGGGG 304
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT P+ N I + F+ + + + + ++L+
Sbjct: 305 NDTIVGVDPNSK---QPGINEIDILTGGAGADKFVMGDSKNPYYVGGGGFLGLNDYALLK 361
Query: 364 YTASYEDLIQV 374
S D IQ+
Sbjct: 362 DFQSGTDKIQL 372
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG++ ND+++G N++ GND+ G G D + + + N +
Sbjct: 88 DFLVGTNKNDLILGRGGNDIIIALGGNDLVFGEEGNDIVIAGSGND-FVSGGSGNDFVFG 146
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ D S + L + +L+ + +
Sbjct: 147 SSGNDILDGGSGNDSLFGGTGKNHFIGSSGNDVLDGEEGNDSV 189
>gi|60207645|gb|AAX14806.1| collagenase [Notophthalmus viridescens]
Length = 469
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 67/221 (30%), Gaps = 52/221 (23%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A + + W + I Y+ T D+ + AL W
Sbjct: 88 KPRCGVSDVARYSITPGNPVWKHTEITYRILNYTPDMAKADV-------DAAIQRALNVW 140
Query: 63 SKVVDLTFE---ETSIHSDIKFISSN----------NGYVCTPRYDSRYFM-EINFDKAD 108
+ V LTF E + I F + + +G + R + +FD+ +
Sbjct: 141 ADVTPLTFTRLYEGTADIQISFAAGDHRDNSPFDGPDGLLAHAFEPGRGIGGDAHFDEDE 200
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W G + L A HE GH+LGL H + S P
Sbjct: 201 RWTKGSERYN-LFLMAAHEFGHSLGLSHSNDPGA---------------LMYPTYSSTDP 244
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKG---SLGNNI 206
+ + DI +Q +YG K G
Sbjct: 245 DEFRLPQ----------DDINGIQSLYGESKNPVQPTGPTT 275
>gi|317483712|ref|ZP_07942659.1| hemolysin-type calcium-binding protein [Bilophila wadsworthia 3_1_6]
gi|316925028|gb|EFV46167.1| hemolysin-type calcium-binding protein [Bilophila wadsworthia 3_1_6]
Length = 1111
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 44/111 (39%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L GG N + + G + + + + + G SGND++ G S ++
Sbjct: 909 DDWLFGGEGNDVLFGLGGNDHLYGGSGDDVLFGGSGNDHLYGGSGNDILFGGSGDDYLDG 968
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
G D+ G SG D Y + +L + +I + + D L + +
Sbjct: 969 GEGRDILFGGSGNDIIKYDSTDFLVDGGDGIDFLITDNKDLTLDDLLRNTD 1019
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + + + + G GND + G S ++V F SGND G SG D F +
Sbjct: 904 NSSDGDDWLFGGEGNDVLFGLGGNDHLYGGSGDDVLFGGSGNDHLYGGSGNDILFGGSGD 963
Query: 314 YLYK--------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
N II YD+ + D ++ L ++ + +
Sbjct: 964 DYLDGGEGRDILFGGSGNDIIKYDSTDFLVDGGDGIDFLITDNKDLTLDD 1013
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 59/187 (31%), Gaps = 28/187 (14%)
Query: 218 FIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMT-------------- 261
+Y GG+DLL D + G + + + ++ G +T
Sbjct: 828 GNDVMYGQGGNDLLIGDGSNTSGADDTLHRLAQELGTLTGGSHGVTPASLSDAILNLGHD 887
Query: 262 ------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+A + S G+D + G N+V F GND G SG D F + +
Sbjct: 888 SAKLHELADWSEKHLENSSDGDDWLFGGEGNDVLFGLGGNDHLYGGSGDDVLFGGSGND- 946
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + D+L E + F D + L D +
Sbjct: 947 ---HLYGGSGNDILFGGSGDDYLDGGEGRDILFGGSGNDIIKYDSTDFLVDGGDGIDFLI 1003
Query: 374 VIGQDVF 380
+D+
Sbjct: 1004 TDNKDLT 1010
>gi|232261|sp|Q00951|HLYA_ACTSU RecName: Full=Hemolysin; AltName: Full=APPA; AltName: Full=CLY-IIA;
AltName: Full=CYTC; AltName: Full=Cytolysin II; AltName:
Full=HLY-IIA
gi|141828|gb|AAA21918.1| cytolysin [Actinobacillus suis]
Length = 956
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D ++L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-GGQDKLAFSDVNLKDLTF 821
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 53/179 (29%), Gaps = 27/179 (15%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ K S F + G D +D G + + +
Sbjct: 721 QFNDIFKGSQFDDVFHGGNGVDTID----------------------GNDGDDHLFGGAG 758
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NA 324
+ + G +GN+ ++G + N++ ND++ G D+
Sbjct: 759 DDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDKLAFSDVNLKD 818
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + E++R + ++ Y A+ + I+ I E +
Sbjct: 819 LTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATNDRKIEEIIGKGGERI 875
>gi|300866983|ref|ZP_07111654.1| hypothetical protein OSCI_3190010 [Oscillatoria sp. PCC 6506]
gi|300335018|emb|CBN56820.1| hypothetical protein OSCI_3190010 [Oscillatoria sp. PCC 6506]
Length = 296
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 7/179 (3%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+N+Y + + I S G+D + +GG N I L E SI G +
Sbjct: 53 DNLYGGNSKDILNGNEGSDFIDGSKGNDFI----LGGKNNDILLGGEGQDSILGNRGQDS 108
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G+ G+D + G N+ F NDV GS G D+ +
Sbjct: 109 INGGEKNDLINGNQGDDFIDGGKGNDSLFGGKNNDVLIGSRGEDSLWGNLGDDTL-CGSQ 167
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N + + N D + + + IL + LI G DVF
Sbjct: 168 ANDYLSGNGNNDIIDGCGGNDTIYGGKGNDTLLGCGGDDILYGDLGNDTLIGDSGNDVF 226
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTES----WSSIG-----GYEKNMTIAQHTVIESVV 272
I G+D +L GG N + + + W ++G G + N ++ + + +
Sbjct: 127 IDGGKGND----SLFGGKNNDVLIGSRGEDSLWGNLGDDTLCGSQANDYLSGNGNNDIID 182
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND + G N+ G+D+ G G DT + + ++ + + I+ D
Sbjct: 183 GCGGNDTIYGGKGNDTLLGCGGDDILYGDLGNDTLIGDSGNDVFVLGVGQGLDIIAD-FT 241
Query: 333 HKQDFL 338
+D L
Sbjct: 242 KGEDLL 247
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 13/121 (10%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S +++ + GDD L + + G N I +++ G
Sbjct: 147 GSRGEDSLWGNLGDDTLCGSQANDY-------------LSGNGNNDIIDGCGGNDTIYGG 193
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND ++G +++ + GND G SG D F L I F + +
Sbjct: 194 KGNDTLLGCGGDDILYGDLGNDTLIGDSGNDVFVLGVGQGLDIIADFTKGEDLLGLSGGL 253
Query: 335 Q 335
Sbjct: 254 T 254
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 7/153 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D L GG I LN S I G + N I + ++G G D ++GN
Sbjct: 51 GNDNL----YGGNSKDI-LNGNEGSDFIDGSKGNDFILGGKNNDILLGGEGQDSILGNRG 105
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ ND+ +G+ G D + + + +I + L D + L
Sbjct: 106 QDSINGGEKNDLINGNQGDDFIDGGKGNDSLFGGKNNDVLIGSRGEDSLWGNLGD-DTLC 164
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ I++ + + G D
Sbjct: 165 GSQANDYLSGNGNNDIIDGCGGNDTIYGGKGND 197
>gi|163796172|ref|ZP_02190134.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[alpha proteobacterium BAL199]
gi|159178631|gb|EDP63171.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[alpha proteobacterium BAL199]
Length = 274
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 1/149 (0%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L G N + ++ G + N T++ + V+G+ GND V GN+ ++ F +G
Sbjct: 125 LYGNASNDLMAAEGGNDTLFGGQGNDTVSGGDGNDLVLGNKGNDHVFGNAGDDTLFGGTG 184
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G SG D I IV D F+ + AD ++
Sbjct: 185 NDTVFGGSGDDFMVTDDGFDYIVIEANGGHDIVADFEVGADRFIL-ADGFTTADVTVEIS 243
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + L+ + DV +
Sbjct: 244 SEGDALLRLSVDHSIRLVGIPPSDVNDGF 272
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 63/183 (34%), Gaps = 9/183 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
V D + I S G D L GG L + G N +A +
Sbjct: 86 TVTVVDLTGAEMIGGSDGSDTLS----GGAGGDTILGGGGDDILYGNASNDLMAAEGGND 141
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND V G N++ + GND G++G DT F + F + +
Sbjct: 142 TLFGGQGNDTVSGGDGNDLVLGNKGNDHVFGNAGDDTLFGGTGND----TVFGGSGDDFM 197
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D++ +E D D R IL + D+ I + ++ +
Sbjct: 198 VTDDGFDYIV-IEANGGHDIVADFEVGADRFILADGFTTADVTVEISSEGDALLRLSVDH 256
Query: 390 GLS 392
+
Sbjct: 257 SIR 259
>gi|126655037|ref|ZP_01726476.1| hypothetical protein CY0110_15537 [Cyanothece sp. CCY0110]
gi|126622516|gb|EAZ93221.1| hypothetical protein CY0110_15537 [Cyanothece sp. CCY0110]
Length = 8087
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 57/183 (31%), Gaps = 28/183 (15%)
Query: 182 TPMVSDIVAVQKIYGAPKGSL----------GNNIYKIE-------------VQQKDSPF 218
T D +AV +YG + G N Y E Q +
Sbjct: 328 TLKSDDSIAV--VYGTNSLTFKNIDNLKGGQGKNTYTFENGAVLAGILTGGATNQNNDIV 385
Query: 219 IQTIYDSGGDDLLDLTL--IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ IY D + T G I+ + + I ++ VG
Sbjct: 386 NEIIYQGSADRTITFTGDKTGNANGLINSGFTKIGKVTTGKGEDNITGFGGNDNFVGGED 445
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-RFENAIIVYDANEHKQ 335
ND ++GN+ N+ G D G +G DT S Y+ + +V NE
Sbjct: 446 NDNLVGNTGNDSLTGEVGKDSLSGGTGNDTLVGGDDSDTYQFEDDWGEDTVVELDNEGTA 505
Query: 336 DFL 338
D L
Sbjct: 506 DTL 508
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 18/148 (12%)
Query: 199 KGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ G++ + Q + TI+ GDD ++ GG +N S+ G
Sbjct: 730 SGNRGDDYLEGSNQDDVLSGDAGLDTIFGHQGDDDIE----GGNQND---------SLDG 776
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TIA + ++V+ + ND V G + + G+D G DT +
Sbjct: 777 GAGNDTIAGGSGDDTVIAGADNDSVDGGAGEDSLEGGEGDDTIKGGDDDDTIIGGTGNDE 836
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVER 343
K + I D D + ++
Sbjct: 837 LKGETGSDTYIFED--NWGHDVVKAIQS 862
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 2/117 (1%)
Query: 226 GGDDLLDLTLIGG-VKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GG+D +L LIGG L S I G E + I + + GND V G
Sbjct: 3756 GGNDDDNLMLIGGDNDRTRILRGGEGSDFILGSEGDDEIYGDAGEDLINAGEGNDTVSGG 3815
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ ++ G+D G +G D A + + + ++ +++ Q +
Sbjct: 3816 TGDDQILGGEGDDQIQGDAGEDVILGEAGNDTIQGGTDNDYLVGGLDSDNVQGEAGN 3872
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 7/122 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGD+ L GG + L +E I G I ++V G +G+D ++G
Sbjct: 3767 GGDNDRTRILRGGEGSDFILGSEGDDEIYGDAGEDLINAGEGNDTVSGGTGDDQILGGEG 3826
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFL 338
++ +G DV G +G DT + + + D L
Sbjct: 3827 DDQIQGDAGEDVILGEAGNDTIQGGTDNDYLVGGLDSDNVQGEAGNDTIEWSIGDGVDSL 3886
Query: 339 SD 340
D
Sbjct: 3887 VD 3888
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 73/216 (33%), Gaps = 24/216 (11%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
++ + ++ + T +D+ + ++ + ++ + I + +GG D
Sbjct: 646 ENPVGSTNSFDYTAYKADVA-------VNLKNATVSLDSTNIFKQSATGIFFPFGNGGAD 698
Query: 230 LL-----DLTLIGGVKNYIDLNTESWSSI--GGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ ++ I G L +S +++ G + + + + G +G D + G
Sbjct: 699 GIPQNNGKISEIKGGSFNDHLLADSDNNVTLSGNRGDDYLEGSNQDDVLSGDAGLDTIFG 758
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ ++ + ND DG +G DT + ++ A+ D + +
Sbjct: 759 HQGDDDIEGGNQNDSLDGGAGNDTIAGGSGDD----------TVIAGADNDSVDGGAGED 808
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
L + + ++L G D
Sbjct: 809 SLEGGEGDDTIKGGDDDDTIIGGTGNDELKGETGSD 844
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+N + + G + I + + G +G DV++G + N+ + ND G
Sbjct: 3803 INAGEGNDTVSGGTGDDQILGGEGDDQIQGDAGEDVILGEAGNDTIQGGTDNDYLVGGLD 3862
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
D A + + + + D E ++ + DQ
Sbjct: 3863 SDNVQGEAGNDTIEWSIGDGVDSLVDGGEDADT--ANFQGYTRDDQG 3907
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 64/214 (29%), Gaps = 52/214 (24%)
Query: 219 IQTIYDSGGD--DLLDLTLIGGVKNYIDLNTESWSS---IGGYEKNMTIAQHTVIESVV- 272
+ TI +G D +++ + G I+L T S I + ++T+ + + +
Sbjct: 3661 VNTIQATGTSQADTYEISGLTGTN--INLATGGGSDLVFISESQGDVTVMGGSGNDMIFL 3718
Query: 273 ----------GSSGNDVVI-------------------GNSANN------------VFFE 291
G GND + GN +N +
Sbjct: 3719 TDVNGDVLVQGEEGNDSIEVNYETVTYSNGKGNITVEGGNDDDNLMLIGGDNDRTRILRG 3778
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+D GS G D + A L I E V Q + + D
Sbjct: 3779 GEGSDFILGSEGDDEIYGDAGEDL--INAGEGNDTVSGGTGDDQILGGEGDDQIQGDAGE 3836
Query: 352 DSVNVKQRS-ILEYTASYEDLIQVIGQDVFESMK 384
D + + + ++ + L+ + D +
Sbjct: 3837 DVILGEAGNDTIQGGTDNDYLVGGLDSDNVQGEA 3870
Score = 37.8 bits (86), Expect = 6.6, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+SGND ++G+ + +G D + G+D F + S + + I D +
Sbjct: 4141 GNSGNDEILGSDHDETIIGGTGADTITANEGVDGFIHEEHSEVDD-GSIDTLIETSDLSF 4199
Query: 333 HKQDF 337
D
Sbjct: 4200 FVSDT 4204
>gi|330950562|gb|EGH50822.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae Cit 7]
Length = 225
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 15/194 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYE 257
G LGN+ Y I+ + + G D L +T I+LN + ++
Sbjct: 19 GGLGNDTYVIDQAGELDLVQEK--ADQGVDTLKITYDNTSPIAQVINLNAGTLANFENVH 76
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +V+G+ N+ + GN A+NV F +GND G G D + + +
Sbjct: 77 -----LKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFV 131
Query: 318 IYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N+ ++ D N + D LS ++ D S A
Sbjct: 132 FNDLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFSFIGSGEFTGAGQLRF 191
Query: 372 IQVIGQDVFESMKH 385
+ + H
Sbjct: 192 ADHVLSGNVNADLH 205
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 22/123 (17%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------YRFENAIIVYD 329
GN +NV G D G G DT+ L + ++N +
Sbjct: 1 GNDLDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTLKITYDNTSPIAQ 60
Query: 330 ANEHKQDFLSDVERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
L++ E + D+ ++L A + L+ G D+
Sbjct: 61 VINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQGADI 120
Query: 380 FES 382
Sbjct: 121 MTG 123
>gi|330942422|gb|EGH45029.1| putative hemolysin-type calcium-binding region [Pseudomonas syringae
pv. pisi str. 1704B]
Length = 1095
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 58/176 (32%), Gaps = 7/176 (3%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
N + + D GG+D + L + LNT + + GG
Sbjct: 875 NSSGAANATGNALDNLIYAGAGDNVMDGRGGNDTVSY-LFATAGVTVALNTSAQQATGG- 932
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + T E+++GS D + GN N +GND G +G D + +
Sbjct: 933 -SGLDTLKGT--ENLIGSQFADTLTGNKNANTLSGGAGNDTLSGGAGDDVLIGGSGADTL 989
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + ++ L D+ F D ++ T S++ +
Sbjct: 990 IGGTGADHYVFNGISDTGLGGLRDI-INGFKTAEGDKLDFSGFDARPLTDSHDAFV 1044
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 256 YEKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N+T T E+ G+ GND ++G ++ +G D+ +G +G D + A
Sbjct: 270 NVGNVTPGILTGTENAEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRDALYGGAD 329
Query: 313 SYLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ ++ YDA D + D
Sbjct: 330 GDTFVYSALTDSYRDYDAGGLTATDTIYDF 359
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 19 VEGTAGGDTLTGTDGNDVLNGNAGTDRIDGGAGADTITGGADADTLTGGAGADLFIYNSR 78
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y+ Y ++ DF +R+ + + + + + Y + D
Sbjct: 79 LDSYRNYTASG----TKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 131
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 72/196 (36%), Gaps = 13/196 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ ++ Q D G D D+ ++ + + + +S S +
Sbjct: 711 GHIFGTSDDDTLVGSSGNDTLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDT 770
Query: 256 YEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ +E+ + +GN +V+IGN++NN+ ++G D+ G G D
Sbjct: 771 VVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSD 830
Query: 306 TFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+++ + + + ++ +++E + + L
Sbjct: 831 SYYVDDAADRVVETNADAKVGGVDTVYSSLASYTLGANLENIVINSSGAANATGNALDNL 890
Query: 363 EYTASYEDLIQVIGQD 378
Y + ++++ G +
Sbjct: 891 IYAGAGDNVMDGRGGN 906
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+ G D G G D + + +
Sbjct: 712 HIFGTSDDDTLVGSSGNDTLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 771
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFES 382
+ +++E L + +++ AS L G D+
Sbjct: 772 VSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTG 825
>gi|300864082|ref|ZP_07108981.1| hypothetical protein OSCI_590002 [Oscillatoria sp. PCC 6506]
gi|300337898|emb|CBN54127.1| hypothetical protein OSCI_590002 [Oscillatoria sp. PCC 6506]
Length = 1252
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 77/256 (30%), Gaps = 46/256 (17%)
Query: 199 KGSLGNNIYKIE--VQQKDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNY 242
N + + + +GGDD L + +L GG
Sbjct: 938 NYPTDNATFGTSIGDTLAGNDGNDILIGAGGDDSLLGYQGDDILDATSGNDSLFGGKDRD 997
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
L + G E + +++ G + ND + GNS N+ + + G+D+ G+
Sbjct: 998 TLLAGGDRDLVWGGEGADILDGGVDGDTLFGGTENDTLYGNSGNDSVYGNEGDDLIYGND 1057
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEH--------------KQDFLSDV---ERLR 345
G D+ + + E+++ N+ D+LS + L
Sbjct: 1058 GNDSLYGNQGGDTISGWEGEDSVFAGKDNDFVFAGEGNDFVCGDLGDDYLSGEAGDDELC 1117
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-ITFDSYLY 404
+ L + + LI G D + EGRD F
Sbjct: 1118 GREGDDTIYGGLGADTLNGDSGNDTLIGGAGNDQLQG---------GEGRDVFIFSD--- 1165
Query: 405 LGSYDDLRNVFGSDRG 420
L D F + G
Sbjct: 1166 LSDNGDTILDFAAGDG 1181
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 22/187 (11%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESW----SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
++ +++ N I L ++ S I Y + ++ +++ G+ GND++IG
Sbjct: 908 NNTPNVSNNTRPDNPI-LTPLTFDGGSSFIFNYPTDNATFGTSIGDTLAGNDGNDILIGA 966
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------KIYRFENAIIVYDANEHKQDF 337
++ G+D+ D +SG D+ F + + D
Sbjct: 967 GGDDSLLGYQGDDILDATSGNDSLFGGKDRDTLLAGGDRDLVWGGEGADILDGGVDGDTL 1026
Query: 338 LSDVERLRFADQCIDSV--NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
E + + ++ + L G D EG
Sbjct: 1027 FGGTENDTLYGNSGNDSVYGNEGDDLIYGNDGNDSLYGNQGGDTISGW---------EGE 1077
Query: 396 DITFDSY 402
D F
Sbjct: 1078 DSVFAGK 1084
>gi|33862645|ref|NP_894205.1| hemolysin-type calcium-binding protein [Prochlorococcus marinus
str. MIT 9313]
gi|33634561|emb|CAE20547.1| Hemolysin-type calcium-binding protein [Prochlorococcus marinus
str. MIT 9313]
Length = 195
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG----------YEKNMTIAQHTVIESVVG 273
D+GG L +T GG N I+L T+S+S + + + ++A + E + G
Sbjct: 28 DNGGTLYLFITDKGGDGNDIELYTKSFSGVLPESLRDPRMIVSDADDSLAGASADEVIFG 87
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+DV++G + ++ +G+D G G DT + Y + R + IIV+ E+
Sbjct: 88 GRGDDVLLGGAGDDQVAGGNGDDWLYGGFGDDTLKGDRGADTYWLSRGVDVIIVFSFAEN 147
Query: 334 KQDFLSD 340
+ + D
Sbjct: 148 DRISVGD 154
>gi|224043574|ref|XP_002198027.1| PREDICTED: similar to Stromelysin-1 [Taeniopygia guttata]
Length = 480
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 63/197 (31%), Gaps = 49/197 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W+ + + Y+ T D+ AL WS+V L F + +DI
Sbjct: 110 WTKHVLTYRIVNYTPDLRPADVN-------TAIEKALHVWSRVTPLRFIKKDRGDADIMI 162
Query: 82 ISSNNGY-------------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ G+ + + +FD+ + W +GT L + A HE
Sbjct: 163 SFAARGHDDFIPFDGPGGSLAHAYAPGKDFGGDAHFDEDETWTKST-EGTNLFYVAAHEF 221
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H N YPVY + D
Sbjct: 222 GHSLGLSHSKDPNALMYPVYRKFDPSVLLLHQ--------------------------DD 255
Query: 188 IVAVQKIYGAPKGSLGN 204
I +Q +YG+ + +
Sbjct: 256 ITGIQYLYGSSPNTNND 272
>gi|127511248|ref|YP_001092445.1| putative outer membrane adhesin like proteiin [Shewanella loihica
PV-4]
gi|126636543|gb|ABO22186.1| putative outer membrane adhesin like proteiin [Shewanella loihica
PV-4]
Length = 1553
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D +D + G + L + I G E N +I + ++G SG+D++ G S
Sbjct: 1350 GTDNVDNLIFGTTEGD-SLTGANLDDEIYGREGNDSIFGLEGDDQLIGGSGDDLIEGGSG 1408
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV---YDANEHKQDFLSDVE 342
N++ GND DG G D A S + ++++ D + + +
Sbjct: 1409 NDIILGGLGNDTIDGGIGADILIGGAGSDTIDAGIDSDIDTFVWDVGSDDNSIDTVLNFD 1468
Query: 343 R 343
Sbjct: 1469 I 1469
>gi|11066090|gb|AAG28453.1|AF195192_1 matrix metalloprotease MMP-27 [Homo sapiens]
gi|119587430|gb|EAW67026.1| matrix metallopeptidase 27 [Homo sapiens]
Length = 513
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 60/189 (31%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T E + L WSKV L F + S +DI
Sbjct: 106 WRKYNLTYRIINYTPDMAR-------AAVDEAIQEGLEVWSKVTPLKFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D Y + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPRK-YPLS--QDD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 INGIQSIYG 261
>gi|13937107|gb|AAK50052.1|AF363362_2 RTX toxin IIA [Actinobacillus pleuropneumoniae]
Length = 956
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D ++L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-GGQDKLAFSDVNLKDLTF 821
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ +Y + + D+ QD L+ +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSDV 814
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 33/85 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G TI + + + G +G+DV+ G + NN +GND+ G D + +
Sbjct: 735 FHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
I + ++ + +D
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDL 819
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R N ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLKNDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|323135542|ref|ZP_08070625.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242]
gi|322398633|gb|EFY01152.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242]
Length = 393
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 13/96 (13%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGR----------NPDAFKAL 443
D TFD YL + D+ R + H+ G EGR + F
Sbjct: 15 TDDTFDEACYLAANPDVAEAVKLGRVRSGWAHFKKFGRVEGRRQKVSDEERATAENFDEK 74
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
Y+A++ D A + G+ HF N G +GR
Sbjct: 75 RYLAANRDARRALEEGK--FASGRAHFENLGRLQGR 108
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 13/100 (13%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGR----------NPDAFKALEYI 530
TFD YL + D+ R + H+ G EGR + F Y+
Sbjct: 18 TFDEACYLAANPDVAEAVKLGRVRSGWAHFKKFGRVEGRRQKVSDEERATAENFDEKRYL 77
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
A++ D A + +G+ HF N G +GR D
Sbjct: 78 AANRDARRALEEGK--FASGRAHFENLGRLQGRRQKRESD 115
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 14/100 (14%)
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI---------- 565
+E D F Y+A++ D+ A V++G HF FG EGR
Sbjct: 11 QESPTDDTFDEACYLAANPDVAEAVKLG--RVRSGWAHFKKFGRVEGRRQKVSDEERATA 68
Query: 566 -TFNPDLYLTSYDDLWNVFGSDRSAAAQ-HYITHGMKEGR 603
F+ YL + D + A+ + H+ G +GR
Sbjct: 69 ENFDEKRYLAANRDARRALEEGKFASGRAHFENLGRLQGR 108
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 13/94 (13%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGR-----------DITFDSY 402
Y A+ D+ + + HF +FG EGR FD
Sbjct: 15 TDDTFDEACYLAANPDVAEAVKLGRVRSGWAHFKKFGRVEGRRQKVSDEERATAENFDEK 74
Query: 403 LYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGR 435
YL + D R + A+ R H+ G +GR
Sbjct: 75 RYLAANRDARRALEEGKFASGRAHFENLGRLQGR 108
Score = 44.0 bits (102), Expect = 0.083, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
TF+ YL + D+ R + H+ G EGR +S + + N EK
Sbjct: 18 TFDEACYLAANPDVAEAVKLGRVRSGWAHFKKFGRVEGRRQKVSDEERATAENFDEK 74
>gi|318604797|emb|CBY26295.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica Y11]
Length = 483
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G + +IGG N I + S + G N I H +S+ G GND++IG
Sbjct: 139 DFIGHKYIRNKVIGGDGNNI-IQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIG 197
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N+ +GND+ DG G D A
Sbjct: 198 GEGNDGLTGGAGNDILDGGDGNDQLHGDAD 227
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I +++ G +GND++ G+++ + F GND+ G G D A +
Sbjct: 152 GGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGND 211
Query: 315 LYKIYRFEN 323
+ +
Sbjct: 212 ILDGGDGND 220
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 24/142 (16%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGD +L GG N I S+ S+ G + N + + + G +GND++ G
Sbjct: 161 GGDKSDNLA--GGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGNDILDGGDG 218
Query: 286 NNVF----------------------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
N+ F GND +G D + Y ++
Sbjct: 219 NDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGNDSYIFSAYDG 278
Query: 324 AIIVYDANEHKQDFLSDVERLR 345
++ + + + +
Sbjct: 279 INMIVEYSNEENTISINDHFFH 300
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 20/164 (12%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
D + + I G GNNI + I+ D +L G N
Sbjct: 138 DDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFD----SLFGQDGND 193
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGS-------------SGNDVVIGNSANNVF 289
I + E + G N + + + G GND++ G N+
Sbjct: 194 ILIGGEGNDGLTGGAGNDILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRI 253
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
ND G +G D++ + A + I + N N+H
Sbjct: 254 EGEKNNDYLAGGTGNDSYIFSAYDGINMIVEYSNEENTISINDH 297
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 9/148 (6%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + I + V+G GN+++ G ++ +GND+ G + D+ F + +
Sbjct: 136 DNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDIL 195
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I N + A D ++L D + + S + + G
Sbjct: 196 -IGGEGNDGLTGGAGNDILDGGDGNDQL-HGDADGLASFASESSW----RGNDIIFGGKG 249
Query: 377 QDVFESM--KHFYEFGLSEGRDITFDSY 402
D E + G F +Y
Sbjct: 250 NDRIEGEKNNDYLAGGTGND-SYIFSAY 276
>gi|187939502|gb|ACD38651.1| putative calcium-binding hemolysin protein [Pseudomonas aeruginosa]
Length = 2301
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY T++ +S+ G +GND++ G+ N+ + +GND G G D + A
Sbjct: 1127 LFGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGNDTLVGGLGNDYLYGEAG 1186
Query: 313 SYLYKIYR--FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y+ R ++ +I D+N K D + +R D + + +L+ ++
Sbjct: 1187 NDVYRFDRGWGQDTLINSDSNIDKTDTIEFGTGIRAEDIILSRNSDDLILLLKGSSDRIT 1246
Query: 371 LIQVIGQDVFES 382
+ QD S
Sbjct: 1247 VSSYFNQDAAGS 1258
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY + T++ +S+ G +GND++ G+ N+ + +G+D G G D A
Sbjct: 1784 LYGYAGSDTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAG 1843
Query: 313 SYLYKIYR--FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y+ R ++ + YD++ + D + +R D + + +L+ +
Sbjct: 1844 NDVYRFDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRIT 1903
Query: 371 LIQVIGQDVFES 382
+ QD S
Sbjct: 1904 ISSYFNQDAAGS 1915
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N ++ + + + G +GND + G N+ +GND G +G D + +
Sbjct: 644 LFGLAGNDSLYGNQGNDLLSGGTGNDTLFGGLGNDTLIGGAGNDYLHGDTGNDIYRFDRG 703
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+Y ++++ DA E +R D + + +L+ ++ + +
Sbjct: 704 WGQDTVYNYDSSANRVDAIEFGTG-------IRAEDIILSRNSDDLILLLKGSSDHITVS 756
Query: 373 QVIGQDVFES 382
QD S
Sbjct: 757 SYFNQDAAGS 766
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ + + + G GND + G + ++ GND G +G D + +
Sbjct: 807 TLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYRFDR 866
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
+Y ++++ DA E
Sbjct: 867 GWGQDTVYNYDSSTSRVDAIEFGT 890
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ + + + G GND + G + ++ GND G +G D + +
Sbjct: 1299 TLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYRFDR 1358
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
+Y ++++ DA E
Sbjct: 1359 GWGQDTVYNYDSSTSRVDAIEFGT 1382
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ + + + G GND + G + ++ GND G +G D + +
Sbjct: 1792 TLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYRFDR 1851
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
+Y ++++ DA E
Sbjct: 1852 GWGQDTVYNYDSSTSRVDAIEFGT 1875
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ + + + G GND + G + ++ GND G +G D + +
Sbjct: 1627 TLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDR 1686
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
I +++ DA E
Sbjct: 1687 GWGQDTIQNNDSSTNKVDAIEFGT 1710
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ + + + G GND + G + ++ GND G +G D + +
Sbjct: 2120 TLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDR 2179
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
I +++ DA E
Sbjct: 2180 GWGQDTIQNNDSSTNKVDAIEFGT 2203
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY T++ +S+ G +GND++ G+ N+ + +G+D G G D A
Sbjct: 799 LYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAG 858
Query: 313 SYLYKIYR--FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y+ R ++ + YD++ + D + +R D + + +L+ +
Sbjct: 859 NDVYRFDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRIT 918
Query: 371 LIQVIGQDVFES 382
+ QD S
Sbjct: 919 ISSYFNQDAAGS 930
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY T++ +S+ G +GND++ G+ N+ + +G+D G G D A
Sbjct: 1291 LYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAG 1350
Query: 313 SYLYKIYR--FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y+ R ++ + YD++ + D + +R D + + +L+ +
Sbjct: 1351 NDVYRFDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRIT 1410
Query: 371 LIQVIGQDVFES 382
+ QD S
Sbjct: 1411 ISSYFNQDAAGS 1422
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY T++ +S+ G +GND++ G+ N+ + +G+D G G D + A
Sbjct: 1619 LYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAG 1678
Query: 313 SYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y+ R + D++ +K D + +R D + + +L+ +
Sbjct: 1679 NDVYRFDRGWGQDTIQNNDSSTNKVDAIEFGTGIRAEDIILSRNSDDLILLLKGSTDRIT 1738
Query: 371 LIQVIGQDVF 380
+ QD
Sbjct: 1739 VSSYFSQDAT 1748
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY T++ +S+ G +GND++ G+ N+ + +G+D G G D + A
Sbjct: 2112 LYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAG 2171
Query: 313 SYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y+ R + D++ +K D + +R D + + +L+ +
Sbjct: 2172 NDVYRFDRGWGQDTIQNNDSSTNKVDAIEFGTGIRAEDIILSRNSDDLILLLKGSTDRIT 2231
Query: 371 LIQVIGQDVF 380
+ QD
Sbjct: 2232 VSSYFSQDAT 2241
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIYR 320
+ + G + D + G N+ + +GND+ G G DT + A Y
Sbjct: 797 DRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGE 856
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
N + +D QD + + + I+ + + + + +DLI
Sbjct: 857 AGNDVYRFDRGW-GQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLI 907
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 7/100 (7%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G++ +D + G + + GND G +G D + + A
Sbjct: 791 KGTTESDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTL----YGGAGDDTLVG 846
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D+L D Q ++ Y +S +
Sbjct: 847 GLGNDYLQGE---AGNDVYRFDRGWGQDTVYNYDSSTSRV 883
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D + ++ + E + G N I Q ++ G++GND + G +
Sbjct: 2224 KGSTDRITVSSYFSQDATGNSRLEEVRFVNGTTWN--IEQIKILVQQQGTAGNDRLYGYA 2281
Query: 285 ANNVFFESSGNDVFDG 300
++ GND G
Sbjct: 2282 GSDTLSGGLGNDSLYG 2297
Score = 37.8 bits (86), Expect = 6.9, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + N+ + +G+D G G D+ + YA
Sbjct: 2270 GTAGNDRLYGYAGSDTLSGGLGNDSLYGYA 2299
>gi|77457690|ref|YP_347195.1| VCBS [Pseudomonas fluorescens Pf0-1]
gi|77381693|gb|ABA73206.1| putative secreted protein, hemolysin [Pseudomonas fluorescens Pf0-1]
Length = 2887
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 16/191 (8%)
Query: 195 YGAPKGSLGNNI---------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
Y ++ N Y++ + + D G + G + +
Sbjct: 2552 YQIHITNITNTTGSNANAAENYQLTMTLNYAGAHDITPDYHGTYTANDNHGGSDTANVTI 2611
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + ++ G + + T + GNDV+ S NN +GND+ G D
Sbjct: 2612 SYQDGHTLTGTSGDDVLVAGTGDNIINAGDGNDVLTAGSGNNELHGGAGNDLLYSGPGND 2671
Query: 306 TFFYYAPSYLYKIYRFENAIIV-------YDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ + V + D L+ +E L ++
Sbjct: 2672 LLDGGSGIDTASYAHATAGVTVNLGLLGAQNTIGAGTDTLTGIENLVGSNFNDTLTGDNN 2731
Query: 359 RSILEYTASYE 369
+++ +
Sbjct: 2732 NNVINGGLGND 2742
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 87/275 (31%), Gaps = 40/275 (14%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
++++G + N + A+ ++ + +H+
Sbjct: 2543 TLTATSDGVYQIHITNITNTTGSNANAAENYQLTMTLNYAGAHDIT------------PD 2590
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y+G Y DN +D+ ++ SY + +I+
Sbjct: 2591 YHGTYT--ANDNHGGSDTANVTI-SYQDGHTLTGTSGDDVLVAGTGDNII---------N 2638
Query: 200 GSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GN++ +Y G+DLLD +Y ++G
Sbjct: 2639 AGDGNDVLTAGSGNNELHGGAGNDLLYSGPGNDLLDGGSGIDTASYAHATAGVTVNLGLL 2698
Query: 257 EKNMTIAQHT----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---------G 303
TI T IE++VGS+ ND + G++ NNV GND+ +G G
Sbjct: 2699 GAQNTIGAGTDTLTGIENLVGSNFNDTLTGDNNNNVINGGLGNDILNGGGGDDLLIGGMG 2758
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+T + ++ + + + D L
Sbjct: 2759 NNTLTGGPGADTFQWLKGNSGHDLVTDFTPGTDKL 2793
>gi|329849533|ref|ZP_08264379.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841444|gb|EGF91014.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 454
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 5/136 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + N I + + G +G+D ++G ++V +GND+ DG +G+DT Y
Sbjct: 30 TLNGGDGNDYIDGGNNNDVLAGGNGHDTLLGGGGSDVLNAGAGNDLVDGGAGVDTVSYAG 89
Query: 312 PSYLYKIYRFENAIIVYDANEH-----KQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
I + A + + + D L ++E + +D ++++
Sbjct: 90 AVNGMWIELNQGATAGFSRDGNLSGAMGTDSLRNLENVVGSDFSDIIKGNSGNNLIQGGN 149
Query: 367 SYEDLIQVIGQDVFES 382
Y+ L G D +
Sbjct: 150 GYDTLYASRGIDTLDG 165
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 214 KDSPFIQTIYDSGGDDLLD---------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+Y S G D LD + I G+ ++L T ++S G +
Sbjct: 146 QGGNGYDTLYASRGIDTLDGGVGGGSANFSDISGLAATVNLTTGAYSLNAGNYGTLI--- 202
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
I+ G++ ND GNS NV ++GND G G D + A +
Sbjct: 203 --SIDDATGTALNDSFTGNSGRNVLDGAAGNDTIAGGGGHDDVWGGAGAD 250
Score = 44.3 bits (103), Expect = 0.073, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIYRFENA 324
G+ +++ G A++V + ++GND +G G D + + +
Sbjct: 6 GNGQSNLYNGGVADDVLYGNNGNDTLNGGDGNDYIDGGNNNDVLAGGNGHDTLLGGGGSD 65
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ A D + V+ + +A + + +L +G D +++
Sbjct: 66 VLNAGAGNDLVDGGAGVDTVSYAGAVNGMWIELNQGATAGFSRDGNLSGAMGTDSLRNLE 125
>gi|37182623|gb|AAQ89112.1| MMP27 [Homo sapiens]
Length = 513
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 60/189 (31%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T E + L WSKV L F + S +DI
Sbjct: 106 WRKYNLTYRIINYTPDMAR-------AAVDEAIQEGLEVWSKVTPLKFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D Y + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPRK-YPLS--QDD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 INGIQSIYG 261
>gi|332160892|ref|YP_004297469.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325665122|gb|ADZ41766.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 483
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G + +IGG N I + S + G N I H +S+ G GND++IG
Sbjct: 139 DFIGHKYIRNKVIGGDGNNI-IQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIG 197
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N+ +GND+ DG G D A
Sbjct: 198 GEGNDGLTGGAGNDILDGGDGNDQLHGDAD 227
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I +++ G +GND++ G+++ + F GND+ G G D A +
Sbjct: 152 GGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGND 211
Query: 315 LYKIYRFEN 323
+ +
Sbjct: 212 ILDGGDGND 220
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 24/142 (16%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGD +L GG N I S+ S+ G + N + + + G +GND++ G
Sbjct: 161 GGDKSDNLA--GGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGNDILDGGDG 218
Query: 286 NNVF----------------------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
N+ F GND +G D + Y ++
Sbjct: 219 NDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGNDSYIFSAYDG 278
Query: 324 AIIVYDANEHKQDFLSDVERLR 345
++ + + + +
Sbjct: 279 INMIVEYSNEENTISINDHFFH 300
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 20/164 (12%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
D + + I G GNNI + I+ D +L G N
Sbjct: 138 DDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFD----SLFGQDGND 193
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGS-------------SGNDVVIGNSANNVF 289
I + E + G N + + + G GND++ G N+
Sbjct: 194 ILIGGEGNDGLTGGAGNDILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRI 253
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
ND G +G D++ + A + I + N N+H
Sbjct: 254 EGEKNNDYLAGGTGNDSYIFSAYDGINMIVEYSNEENTISINDH 297
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 9/148 (6%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + I + V+G GN+++ G ++ +GND+ G + D+ F + +
Sbjct: 136 DNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDIL 195
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I N + A D ++L D + + S + + G
Sbjct: 196 -IGGEGNDGLTGGAGNDILDGGDGNDQL-HGDADGLASFASESSW----RGNDIIFGGKG 249
Query: 377 QDVFESM--KHFYEFGLSEGRDITFDSY 402
D E + G F +Y
Sbjct: 250 NDRIEGEKNNDYLAGGTGND-SYIFSAY 276
>gi|307150799|ref|YP_003886183.1| C-type lectin domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981027|gb|ADN12908.1| C-type lectin domain protein [Cyanothece sp. PCC 7822]
Length = 4069
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 82/265 (30%), Gaps = 32/265 (12%)
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD----IVA 190
H G + + D +F + M + S G V D +A
Sbjct: 1796 DHAGPWEEFQIITQDDGKIALQTFNNTYMRANSAWNVDQAGSIGDWEKFRVIDRGSGQIA 1855
Query: 191 VQKIYGAPKGSLGNNIY------KIEVQQKDSPFIQTI---YDSGGDDLLDLTLIGGVKN 241
++ + + N Y + Q + +T + + D LD +
Sbjct: 1856 LEAHWPPDFWNGYRNTYIQATNTGLITQTNNLDSWETFTPEFRNNDIDTLDFSATTTKTI 1915
Query: 242 YIDL--------NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
++L N + ++ Y + IE+ VG S ND + GN+ NN +
Sbjct: 1916 SLNLGYYGQQQINENLFLTLNTYFGSNAYIN---IENAVGGSLNDTIRGNNLNNFLRGNG 1972
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDV---ERLR 345
GND G G D+ + + ++ N+ D+L + L
Sbjct: 1973 GNDSLYGGDGNDSLDGEDGNDFLDGGNGNDTLLGSLGNDTLLSASGDDYLYGGNGNDTLD 2032
Query: 346 FADQCIDSVNVKQRSILEYTASYED 370
+D + + +Y D
Sbjct: 2033 GSDGGEGNDTLDGGDGNDYLDGGRD 2057
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 11/188 (5%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWS 251
GNN I T+ GDDL DL + + +
Sbjct: 2434 NNTITGNN---ANNILDGGAGIDTLIGGLGDDLYIVDTIADLITENAAEGTDTVQSSVSI 2490
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ +N+T+ I + G+ N+ + GN+ANN+ S G+D G G D +
Sbjct: 2491 TLAANIENLTLTGTNTI-NATGNELNNTITGNNANNILDGSDGDDTLIGGLGDDLYIVDT 2549
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYED 370
+ + + + + L ++E L I+ +++ ++
Sbjct: 2550 TTDIITENAAQGTDTIQSSVTFSLANLPNIENLTLTGINTINGTGNVLNNLITGNSANNI 2609
Query: 371 LIQVIGQD 378
L G D
Sbjct: 2610 LNGGAGND 2617
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 89/266 (33%), Gaps = 22/266 (8%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
+ + + AT + + +Q ++ + + + +IE + +GG
Sbjct: 2173 NYAGSHTEFQATILSDGSIQIQDMFTSNGNEGTDILREIEKIYFATGGGYYGVLTGGTGN 2232
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LT + I G + +++ G +GND++ G + N++
Sbjct: 2233 DSLTANNNWSSLI---------FGDAGNDTLNGAGLGDDTLSGGTGNDLLNGQNGNDLLD 2283
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D G +G D + + + + + + L ++E L
Sbjct: 2284 GGAGVDTLIGGNGNDLYIVDTTTDIITENAAQGTDTIQSSVTFSLADLPNIENLTLTGTN 2343
Query: 351 IDS----------VNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDIT 398
+ +IL+ A + LI +G D + +++ ++G D
Sbjct: 2344 TINGTGNTLNNTITGNNANNILDGGAGIDTLIGGLGDDLYIVDTIAEIITENAAQGTDTV 2403
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L + + + G++ A
Sbjct: 2404 QSSVSITLAANIENLTLTGTNTINAT 2429
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 6/143 (4%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N++ + Q ++ + D++ +LTL G I+ S ++ I
Sbjct: 3837 NDVITENLNQGTDIVNSSVSFTLADNVENLTLTGTSN--INGTGNSLNNTLTGNNGANIL 3894
Query: 264 QH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ +S+ G SG+D + G N+ GNDV +G D A S +
Sbjct: 3895 SGQSGNDSLNGGSGDDTLQGQQGNDTLTGGVGNDVLEGGESDDRLAGGAGSD---LLTGG 3951
Query: 323 NAIIVYDANEHKQDFLSDVERLR 345
N I + N L++ +R+
Sbjct: 3952 NGINTFVINPLTDSLLANFDRIS 3974
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 86/274 (31%), Gaps = 29/274 (10%)
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+ + T ++D+ ++ + ++ + + +
Sbjct: 2310 TENAAQGTDTIQSSVTFSLADLPNIENLTLTGTNTINGTGNTLNNTITGNNANNILDGGA 2369
Query: 227 GDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ--------HTVIESVV 272
G D L DL ++ + I N + ++T+A T +
Sbjct: 2370 GIDTLIGGLGDDLYIVDTIAEIITENAAQGTDTVQSSVSITLAANIENLTLTGTNTINAT 2429
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ N+ + GN+ANN+ +G D G G D + + L I +
Sbjct: 2430 GNELNNTITGNNANNILDGGAGIDTLIGGLGDDLYIVDTIADL--ITENAAEGTDTVQSS 2487
Query: 333 HKQDFLSDVERLRFADQCIDS----------VNVKQRSILEYTASYEDLIQVIGQD--VF 380
+++E L + +IL+ + + LI +G D +
Sbjct: 2488 VSITLAANIENLTLTGTNTINATGNELNNTITGNNANNILDGSDGDDTLIGGLGDDLYIV 2547
Query: 381 ESMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRN 413
++ ++G D I L + ++ N
Sbjct: 2548 DTTTDIITENAAQGTDTIQSSVTFSLANLPNIEN 2581
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 12/162 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNM-TIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D G +NY+ +N+ SS G + N+ ++E GND +IG S N+ +
Sbjct: 3492 DNNFYGTPENYVLMNS---SSPGKWSDNIPDFNYRGIVELTQVLGGNDSLIGGSGNDTLY 3548
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-------NAIIVYDANEHKQDFLSDVER 343
+GND +G + D+ + + +Y + N + +++ER
Sbjct: 3549 GGAGNDTLNGGTDDDSLVGGSGNDVYIVDSINDVITENLNDGVDQVNASVSYTLSANLER 3608
Query: 344 LRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L I+ + + A L G D +
Sbjct: 3609 LSLTGTSDINGTGNSFNNSIIGNAGNNTLTGAGGNDTVDGGA 3650
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN +Y V + I + G D ++ + + + +L T + + G +
Sbjct: 3083 GGTGNEVY--NVDSSTDVINENIDE--GTDTVNASATYVLSD--NLETLTLTGTGNIDG- 3135
Query: 260 MTIAQHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++ G+SGN+++ G+ N+ +GND DG G D+ + + +Y I
Sbjct: 3136 ----TGNRLNNILTGNSGNNLLTGDIGNDTLNGGTGNDTLDGGVGGDSMAGGSGNDVYAI 3191
Query: 319 YRFENAII 326
+ II
Sbjct: 3192 DDINDVII 3199
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
GG N T+ + + G GND++ G ++ GND+ +G SG + F
Sbjct: 1684 FGGNNDNNTLWGTDSSDLINGYGGNDILHGKGGDDNLNGGDGNDILNGGSGKNIFNGGTG 1743
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
++ I + D +
Sbjct: 1744 DDTLIGRTDDDTYIFDTDDPQGSDTI 1769
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 25/133 (18%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI------------DLNTE-- 248
T+Y G+D L D +L+GG N + +LN
Sbjct: 3533 GGNDSLIGGSGNDTLYGGAGNDTLNGGTDDDSLVGGSGNDVYIVDSINDVITENLNDGVD 3592
Query: 249 --SWSSIGGYEKNM---TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ S N+ ++ + I + G+S N+ +IGN+ NN + GND DG +G
Sbjct: 3593 QVNASVSYTLSANLERLSLTGTSDI-NGTGNSFNNSIIGNAGNNTLTGAGGNDTVDGGAG 3651
Query: 304 LDTFFYYAPSYLY 316
D +Y Y
Sbjct: 3652 NDLIVEDTGAYYY 3664
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 21/171 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
G + N ++ + + S GDD L DL ++ + I N
Sbjct: 2503 GTNTINATGN--ELNNTITGNNANNILDGSDGDDTLIGGLGDDLYIVDTTTDIITENAAQ 2560
Query: 250 WSSIGGYEKNMTIAQHTVIESV-------VGSSGN---DVVIGNSANNVFFESSGNDVFD 299
+ ++A IE++ + +GN +++ GNSANN+ +GND
Sbjct: 2561 GTDTIQSSVTFSLANLPNIENLTLTGINTINGTGNVLNNLITGNSANNILNGGAGNDTLI 2620
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSDVERLRFA 347
G G DT Y ++ + + Q++ L +E+ +
Sbjct: 2621 GGDGFDTATYTNLQSNIQLTDNGSNNFTAQFAINGQNYTHQLQSIEKFEGS 2671
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYD---------SGGDDLLDLT-LIGGVKNYIDL 245
G +L + + + I D + G D+++ + N +L
Sbjct: 3165 GTGNDTLDGGVGGDSMAGGSGNDVYAIDDINDVIIENLNAGIDVVNTSITYTLGNNLENL 3224
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N + + N+ + + + + G+S N+V+ GN A+N+ +GND G G D
Sbjct: 3225 NLSGYYNTNQTGNNIDLLYNKI--NGTGNSLNNVITGNYADNILSGEAGNDSLTGFGGND 3282
Query: 306 TFFYYAPSYLYK 317
T + A +
Sbjct: 3283 TLYGGAGNDTLD 3294
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 64/180 (35%), Gaps = 35/180 (19%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDS--GGDDLLDLTLIGGVKNYI-------DLNT 247
NN + K+SPF TI + DL D N I ++ T
Sbjct: 2838 TNDAPTLNNAIAPQTAIKNSPFTFTIPSNTFSDVDLGDSLSYSLAPNTILPSGVTFNVAT 2897
Query: 248 ESWSSIGGYEK----NMTI-----AQHTV-------IESVVGSSGNDVVIGNS------- 284
++S N+TI A TV I +++G+SGND +IG
Sbjct: 2898 RTFSGTPTSTSVGIYNITIIATDTAGATVSNTFTLTIANLIGTSGNDTLIGTPNSEKLEG 2957
Query: 285 --ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ + GND DG +G D+ LY I + + + NE S V
Sbjct: 2958 LGGNDSLAGAEGNDTLDGGTGNDSMSGGTGDDLY-IVNTTSDRTLENPNEGIDTVQSSVN 3016
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 26/196 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI-DLNTESWSSIGGY 256
G G+++Y + +T+ + G D + ++ + Y+ +L S++ G
Sbjct: 2983 SGGTGDDLYIVNTTSD-----RTLENPNEGIDTVQSSVNWTLGTYLENLILTGSSNLSG- 3036
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N T SG D N+ SGND +G +G DT + +Y
Sbjct: 3037 TGNTLNNSITGNGGNNNLSGLD------GNDFLIGGSGNDTLNGGAGNDTLVGGTGNEVY 3090
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD----------QCIDSVNVKQRSILEYTA 366
+ + ++ + + D ++ +D ID + +IL +
Sbjct: 3091 NVDSSTD--VINENIDEGTDTVNASATYVLSDNLETLTLTGTGNIDGTGNRLNNILTGNS 3148
Query: 367 SYEDLIQVIGQDVFES 382
L IG D
Sbjct: 3149 GNNLLTGDIGNDTLNG 3164
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 29/133 (21%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLT---------LIGGVKNYI------------DLNTE 248
T+Y G+D LD + L+GG +N + + N
Sbjct: 3272 NDSLTGFGGNDTLYGGAGNDTLDGSDSFRYYSMVLVGGTENDVYIIDSVNAVIVENSNEG 3331
Query: 249 SW-------SSIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ ++ N+T+A+ + + G++ N+++ GN+ +N + GND DG
Sbjct: 3332 TDLVITTTNYTLPANVDNLTLAEADFGQYNGTGNNLNNILTGNTNDNSLTGAGGNDTLDG 3391
Query: 301 SSGLDTFFYYAPS 313
+G D +
Sbjct: 3392 GAGNDILIGDLTN 3404
>gi|307261439|ref|ZP_07543110.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306868834|gb|EFN00640.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 956
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D ++L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-GGQDKLAFSDVNLKDLTF 821
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|255068245|ref|ZP_05320100.1| putative outer membrane secretion protein [Neisseria sicca ATCC
29256]
gi|255047515|gb|EET42979.1| putative outer membrane secretion protein [Neisseria sicca ATCC
29256]
Length = 427
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 57/194 (29%), Gaps = 15/194 (7%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q YG + GN I+ + +T+ G D D G + I
Sbjct: 116 QNTYGHDDKNPGNIIHVDGSTKDKDGLTKTV----GTDKKDTIYGTGGDDVI-------- 163
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + I +++ G + D + G + GND +G + D
Sbjct: 164 --YGGDGADVIYGGDGNDTLQGDNNGDSLYGQGGKDYLQGGDGNDYLNGGADADIMRGGD 221
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-EYTASYED 370
+ +Y + + +I Y D + V D +I A D
Sbjct: 222 GNDVYFVDHKGDQVIEYGNANGGIDTVRSVIDYTLTDNVEHLFLQGSGNINGTGNALNND 281
Query: 371 LIQVIGQDVFESMK 384
+ G + +
Sbjct: 282 INGNSGNNHLYGLA 295
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 51/147 (34%), Gaps = 12/147 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN++Y V K I+ +GG D + + N L N+
Sbjct: 222 GNDVY--FVDHKGDQVIEYGNANGGIDTVRSVIDYTLTDNVEHL-------FLQGSGNIN 272
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G+SGN+ + G + ++ GND DG G D Y +
Sbjct: 273 GTGNALNNDINGNSGNNHLYGLAGDDCLVGKDGNDYLDGGIGNDVLIGGTGDDTYFFDKG 332
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFAD 348
+ D E D L + + +D
Sbjct: 333 YGRDTIQD--ESGNDTLQFGKGISASD 357
>gi|165976376|ref|YP_001651969.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|165876477|gb|ABY69525.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 956
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D ++L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-GGQDKLAFSDVNLKDLTF 821
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|72382575|ref|YP_291930.1| hypothetical protein PMN2A_0736 [Prochlorococcus marinus str. NATL2A]
gi|72002425|gb|AAZ58227.1| hypothetical protein PMN2A_0736 [Prochlorococcus marinus str. NATL2A]
Length = 1543
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-- 331
G+D + G ++ F G+D DG G D FY YK R ++ + + D
Sbjct: 1275 DDGDDRLEGGETSDKIFGGLGSDFIDGGEGEDVAFYAGNFADYKFDRTKDTVAIQDQREG 1334
Query: 332 -EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D L +VE ++FADQ +D + + YT +D
Sbjct: 1335 LNDGNDTLKNVEYIQFADQKVDVSKLDV--VKTYTGDSKDF 1373
>gi|158338171|ref|YP_001519348.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158308412|gb|ABW30029.1| hemolysin-type calcium-binding region [Acaryochloris marina
MBIC11017]
Length = 1539
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 60/190 (31%), Gaps = 33/190 (17%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV------IESVVGSS 275
I +GG D LD ++I++ +S+ + + TV E++ GS+
Sbjct: 997 IAGAGGTDTLDGGEGNDTNSFINIGAPVVASLASGSASYEVGSGTVFENFSNFENLDGSA 1056
Query: 276 GNDVVIGNSANNVF---------------------------FESSGNDVFDGSSGLDTFF 308
ND + G+ +N GND+ DG G+DT
Sbjct: 1057 QNDQLFGDGNDNTLAGNDGDDLLSGGGGDDTLLGGLGDDTLQGGGGNDLTDGGDGIDTAD 1116
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ QD LS++E L + ++L A
Sbjct: 1117 FQNIGADVTADLSTGQAQYIANGNPIQDQLSNIENLTGSTNNDALTGDDGDNVLAGNAGN 1176
Query: 369 EDLIQVIGQD 378
+ L G D
Sbjct: 1177 DTLQGGAGND 1186
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 51/146 (34%), Gaps = 8/146 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D D IG DL+T I N Q + IE++ GS+ ND + G+
Sbjct: 1109 GDGIDTADFQNIG-ADVTADLSTGQAQYIA--NGNPIQDQLSNIENLTGSTNNDALTGDD 1165
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+NV ++GND G +G D I + V + FL+ +
Sbjct: 1166 GDNVLAGNAGNDTLQGGAGNDLLRGDEIGSGTAI-----RVTVTNTLGEGGTFLTPIWFG 1220
Query: 345 RFADQCIDSVNVKQRSILEYTASYED 370
D + + L ED
Sbjct: 1221 FHDGANFDLFTAGEAASLGLERLAED 1246
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 4/118 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY---YAPSYLYKIYRFENAI 325
+++ G GND + G + ++ GND DG G D + A + +
Sbjct: 891 DALQGGGGNDTLEGGAGDDTLQGGGGNDSLDGGEGTDIASFADIGADVNVTLNADGTGSA 950
Query: 326 IVYDANEHKQDFLSDVE-RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + +E + A+ N +I+E A + + G D +
Sbjct: 951 EYEVNGRTVTDTFTSIEGVIGSANNDTIIANGAAGNIIEGGAGDDFIAGAGGTDTLDG 1008
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ +G+D++ G N+ GND G +G D F + A S + F+ A V D
Sbjct: 1431 AIADAGDDLLEGGEGNDTLEGGGGNDTLTGGAGNDVFVFEADSGANIVTDFDIADDVLDV 1490
Query: 331 NEHKQDF 337
+ D
Sbjct: 1491 SAIFSDL 1497
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 10/138 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT---------ESWSSIGGYEK 258
+ T+ GG+D LD + ++ D+ + S+
Sbjct: 897 GGNDTLEGGAGDDTLQGGGGNDSLDGGEGTDIASFADIGADVNVTLNADGTGSAEYEVNG 956
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSAN-NVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
T IE V+GS+ ND +I N A N+ +G+D G+ G DT +
Sbjct: 957 RTVTDTFTSIEGVIGSANNDTIIANGAAGNIIEGGAGDDFIAGAGGTDTLDGGEGNDTNS 1016
Query: 318 IYRFENAIIVYDANEHKQ 335
++ A+
Sbjct: 1017 FINIGAPVVASLASGSAS 1034
>gi|114640119|ref|XP_001154361.1| PREDICTED: collagenase 3 isoform 2 [Pan troglodytes]
Length = 471
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|16264320|ref|NP_437112.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
1021]
gi|15140457|emb|CAC48972.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
1021]
Length = 559
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/251 (18%), Positives = 73/251 (29%), Gaps = 59/251 (23%)
Query: 186 SDIVAVQKIYGAPKGSLG---NNIYK----------------------IEVQQKDSPFIQ 220
DI++ Q YG+P + G N + S +
Sbjct: 196 HDILSFQDAYGSPLATNGVSLNTATGTVVDQFGFSETFQNFEEYRGTQFADKMIGSSANE 255
Query: 221 TIYDSGGDDLLDLTLI-------------GGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T GG D D G + +DL + G E + T
Sbjct: 256 TFMGLGGRDTFDGWTGTDLVRYDRDAQFGGTLGVKVDLAAGTAKDGFGREDTL-----TS 310
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE V G+ +D ++GN A N +G D +G +G DT + Y + R + +
Sbjct: 311 IEDVRGTDFDDSIVGNWAANFLRGFAGKDWINGGTGSDTMRGGKGNDTYTVDRPGDIVDE 370
Query: 328 YDANEHKQDFLS---------------DVERLRFADQ-CIDSVNVKQRSILEYTASYEDL 371
+ D + VE L ++ + L + L
Sbjct: 371 NADSGAGIDTIRSNISFNLGNTAAVKGSVENLVLTGTWNVNGAGNGLNNSLSGNSGNNSL 430
Query: 372 IQVIGQDVFES 382
G DV
Sbjct: 431 NGGAGDDVLNG 441
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 64/179 (35%), Gaps = 16/179 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ Y ++ + + DSG G D + ++ I N + +++ G +N+
Sbjct: 355 GNDTYTVD---RPGDIVDENADSGAGIDTI--------RSNISFNLGNTAAVKGSVENLV 403
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T + G+ N+ + GNS NN +G+DV +G G D ++
Sbjct: 404 L-TGTWNVNGAGNGLNNSLSGNSGNNSLNGGAGDDVLNGDLGNDILTGSVGLDTFRFNTA 462
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D DF+ + ++ +++ + ++
Sbjct: 463 LDEATNVDT---VTDFIVADDTIQLQGSIFSAISGTGTLTDIQFVANATGAAETAENRI 518
>gi|146278458|ref|YP_001168617.1| glycoside hydrolase family protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556699|gb|ABP71312.1| glycoside hydrolase, family 16 [Rhodobacter sphaeroides ATCC 17025]
Length = 467
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 7/159 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G ++ G I + + + G N + + + +G+D +IG + N
Sbjct: 311 GSAAINGIGNGQANLMI--GNGAANRLVGGGGNDRLEGRNGHDRLEAGAGHDTLIGGAGN 368
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLR 345
+ +G D G +G DT A + R ++ D +D L +
Sbjct: 369 DRLLGGTGADRLHGGAGNDTLTGGAGHDTFVFARGHGRDVITDFVPRGGEDRLE----IH 424
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D+ + V +++ + S L+Q + +
Sbjct: 425 GYDRAAEVRQVGADTLIVLSDSDSILLQNVRVAQLGPVD 463
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 1/129 (0%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI + V G+ D++ G N+ G D G +G D + +
Sbjct: 221 LPSDSTIFGNRSANLVQGTGAADLLYGFGGNDTLAGGGGADRMYGGAGHDIYLVDNAADR 280
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I R ++ Q + I+ + Q +++ + L+
Sbjct: 281 V-IERAGEGTDTVRSSVSYQLEAHVERLVLTGSAAINGIGNGQANLMIGNGAANRLVGGG 339
Query: 376 GQDVFESMK 384
G D E
Sbjct: 340 GNDRLEGRN 348
>gi|319072680|ref|NP_001187264.1| matrix metalloproteinase 13 [Ictalurus punctatus]
gi|291195939|gb|ADD84683.1| matrix metalloproteinase 13 [Ictalurus punctatus]
Length = 471
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 63/190 (33%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W+ + Y+ + T + E++ + Q AL W++V L F+
Sbjct: 110 WTTNSLTYRIENYT---PDMSVAEVDDSIQR----ALQVWARVTPLKFKRIYSGIADIMI 162
Query: 73 ---TSIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D NG++ + + +FD + + + +G L A HE
Sbjct: 163 SFVVGDHRDGSPFDGPNGFLAHAFFPGVGIGGDAHFDDDETFSFRSTRGYNLFLVAAHEF 222
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + SY P ++ D+
Sbjct: 223 GHSLGLEHSNVPGA---------------LMYPTYSYTNPDTFVLPR----------DDV 257
Query: 189 VAVQKIYGAP 198
+Q +YG+
Sbjct: 258 KRIQALYGSN 267
>gi|85705845|ref|ZP_01036941.1| hypothetical protein ROS217_08610 [Roseovarius sp. 217]
gi|85669433|gb|EAQ24298.1| hypothetical protein ROS217_08610 [Roseovarius sp. 217]
Length = 983
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 51/153 (33%), Gaps = 8/153 (5%)
Query: 199 KGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G G++I + + G+D L D ++ G N +
Sbjct: 762 NGGDGDDIMGAGFGDDSVVGAAGNDVVAGGAGNDTLSGGSGDDSMSGSFGNDLINAGGGA 821
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
IGG TI + V G G+DV+ G N+ ND+ DG SG DT
Sbjct: 822 DDIGGGAGQDTINAGAGNDQVGGGEGDDVISGGDDNDFLAGGGRNDIIDGGSGDDTINGG 881
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
A + + + + D + D E
Sbjct: 882 AGNDQMTGGTGADQFVFSAFVAGESDVIGDFED 914
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 43/140 (30%), Gaps = 10/140 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSS 302
SI + + + +++ G GND + G +++ +GNDV G +
Sbjct: 733 SIPASDGDDVVNGGAGNDNIGGGFGNDTINGGDGDDIMGAGFGDDSVVGAAGNDVVAGGA 792
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + F N +I + + + + ++
Sbjct: 793 GNDTLSGGSGDDSMS-GSFGNDLINAGGGADDIGGGAGQDTINAGAGNDQVGGGEGDDVI 851
Query: 363 EYTASYEDLIQVIGQDVFES 382
+ L D+ +
Sbjct: 852 SGGDDNDFLAGGGRNDIIDG 871
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 14/155 (9%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D L T G I G + I+ ++++G +G+D + GN +
Sbjct: 170 GNDTL--TGFGSNDA-----------IDGLGGDDEISGSGGADTLLGGTGDDRLFGNDGS 216
Query: 287 NVFFESSGNDVFDGSSGLDTFFY-YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++ G D DG GLD A + I + + + L
Sbjct: 217 DLLIGGPGADTVDGGLGLDILQGTSAELNGDTLVIGHGDEIRITGLTPSSNVIIGEDGLS 276
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + +E + S L+Q I
Sbjct: 277 VSIDADGNGLTESSFAVETSESGATLVQSIVNGAT 311
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 10/113 (8%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE------SVVGSSGNDVVIGNSANN 287
++ G +DL +S G + + I+ + GS G D ++G + ++
Sbjct: 153 SVPGVTTAEVDL----FSPTEGNDTLTGFGSNDAIDGLGGDDEISGSGGADTLLGGTGDD 208
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
F + G+D+ G G DT + + E + ++
Sbjct: 209 RLFGNDGSDLLIGGPGADTVDGGLGLDILQGTSAELNGDTLVIGHGDEIRITG 261
>gi|32035699|ref|ZP_00135587.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|190150277|ref|YP_001968802.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|303253548|ref|ZP_07339686.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307245862|ref|ZP_07527947.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307247948|ref|ZP_07529981.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307250204|ref|ZP_07532160.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307254835|ref|ZP_07536661.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259277|ref|ZP_07541006.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307263619|ref|ZP_07545231.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|123196|sp|P15377|RTX2A_ACTPL RecName: Full=RTX-II toxin determinant A; AltName: Full=APX-IIA;
AltName: Full=Cytolysin IIA; Short=CLY-IIA; AltName:
Full=Hemolysin IIA; Short=HLY-IIA
gi|38941|emb|CAA43423.1| ClyII-A protein (cytolysin II) [Actinobacillus pleuropneumoniae]
gi|141825|gb|AAA87232.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 5]
gi|189915408|gb|ACE61660.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|302647468|gb|EFL77686.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306853222|gb|EFM85442.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306855552|gb|EFM87722.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306857733|gb|EFM89833.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306862206|gb|EFM94174.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866644|gb|EFM98503.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306871042|gb|EFN02774.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 956
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D ++L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-GGQDKLAFSDVNLKDLTF 821
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|126735233|ref|ZP_01750979.1| calcium binding hemolysin protein, putative [Roseobacter sp. CCS2]
gi|126715788|gb|EBA12653.1| calcium binding hemolysin protein, putative [Roseobacter sp. CCS2]
Length = 3576
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTE--SWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+D G G D +D + N IDL++ W S GG+E + +E+++GSSG +
Sbjct: 3378 FDGGEGVDTVDFS-YSSEDNVIDLSSGRIDWPSTGGFELIVN------VENIIGSSGANT 3430
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++G++ +N G D G SG D F + + + I A + D S
Sbjct: 3431 IVGSADDNRLEGRGGVDAIFGGSGEDNLFGGSGDDVLSGGSDRDH-IWGGAGSDRIDSGS 3489
Query: 340 DVERLRFADQCIDS 353
+ +R D+
Sbjct: 3490 GNDTMRGDSGSNDA 3503
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWS--SIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I+ + DD++ G + +L S S +I G + TI + + G G+D
Sbjct: 3276 IWTT--DDIIQNAKTTGDASANNL-YGSISHDNIYGLGGDDTIEGRAGNDHLYGGDGDDT 3332
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENAIIVYDANEH 333
+ G ++ F G+DV +G +G D F A L + + D +
Sbjct: 3333 LKGGDGDDSLFGGDGDDVLEGGNGDDLLFGGAGDDLLTGSGYADSFDGGEGVDTVDFSYS 3392
Query: 334 KQDFLSD 340
+D + D
Sbjct: 3393 SEDNVID 3399
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G++ +D + G + N+ S+G+D G G DT + + Y +++ I+ +
Sbjct: 2980 VDGTAYDDNIYGLTGNDTINGSAGDDTLVGGDGNDTLKGGSGNDTYVWSVGDDSDIILEN 3039
Query: 331 NEHKQDFLSDVER 343
+ D L +
Sbjct: 3040 KSDETDVLLFQDV 3052
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ N+ + G + ++ +G+D G +G DT A Y + I+ + +
Sbjct: 2379 NGANNNHIYGLAGDDTIDAKAGDDTLVGGTGNDTLKGGAGDDTYVWSIGDGNDIINELSN 2438
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D SDV+ L + I ++ +S +DLI +
Sbjct: 2439 DGPDRDSDVDTLIL--KGISLNDINLQSWHYKNEVKDDLIIWTDDWSDDKF 2487
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 52/181 (28%), Gaps = 13/181 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ +D G LD I G DLN Y+ N I T
Sbjct: 2939 RYSDSNNGRGIEIIEFDDGVVWTLD--EIRGATVVEDLNESGLVDGTAYDDN--IYGLTG 2994
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK----IYRFEN 323
+++ GS+G+D ++G N+ SGND + S G D+ +
Sbjct: 2995 NDTINGSAGDDTLVGGDGNDTLKGGSGNDTYVWSVGDDSDIILENKSDETDVLLFQDVGS 3054
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I H D E + + + EY + + +
Sbjct: 3055 DSITLKRMSHGDDLFVIRET-----GQQNEQSTFGSFLYEYYDGNPGSARSVADANADGS 3109
Query: 384 K 384
Sbjct: 3110 G 3110
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
++ IDL S+ G E + TI ++ G GND++ G ++V SGND
Sbjct: 2512 NRQDIIDLT-----SMAGTESSDTITGLGSDNTLRGYDGNDILKGGYGDDVLIGDSGNDH 2566
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+G SG DT+ + I + D S
Sbjct: 2567 LEGGSGSDTYIWSRGHGNDTIDEEGQSDRTQTDRLILTDVNS 2608
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 62/167 (37%), Gaps = 20/167 (11%)
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
A+ T ++SDI + GA + +++ ++ ++ +D G
Sbjct: 2744 TSATDAETDTLLLSDIAST----GADLSKVSDDLIVTITATNETITVRDRFDVG------ 2793
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI----------ESVVGSSGNDVVIG 282
T G ++ + + + G I T ++++G GND + G
Sbjct: 2794 QTGDGDGVEFVRFSDGVFVEVLGGALAEVITTGTEAANTLHGWGLEDTLIGLGGNDTLEG 2853
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ +++ SG D+ G +G DT+ + A I E+ D
Sbjct: 2854 HGGDDLLIGGSGGDIMRGGAGNDTYEWLAGDGNDSIRDNESNTSEID 2900
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 3/111 (2%)
Query: 254 GGYEKNMTIA---QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + + IA V +++ G GNDV+ S ++ + ND G SG DT+ Y
Sbjct: 2674 GTNDNDTGIAEINGSRVRDNLYGLLGNDVLDAGSGDDWLYGGKDNDTLYGDSGNDTYIYE 2733
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
I D + + + +D I ++ +I
Sbjct: 2734 EGDGNDLIIDTSATDAETDTLLLSDIASTGADLSKVSDDLIVTITATNETI 2784
Score = 37.8 bits (86), Expect = 6.9, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 19/126 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDT--- 306
++ G N + + + + G ND + G+S N+ + E GND+ +S D
Sbjct: 2693 NLYGLLGNDVLDAGSGDDWLYGGKDNDTLYGDSGNDTYIYEEGDGNDLIIDTSATDAETD 2752
Query: 307 --FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------------VERLRFADQCID 352
S + + + +IV ++ + D VE +RF+D
Sbjct: 2753 TLLLSDIASTGADLSKVSDDLIVTITATNETITVRDRFDVGQTGDGDGVEFVRFSDGVFV 2812
Query: 353 SVNVKQ 358
V
Sbjct: 2813 EVLGGA 2818
>gi|113954144|ref|YP_730341.1| type I secretion target GGXGXDXXX repeat-containing protein
[Synechococcus sp. CC9311]
gi|113881495|gb|ABI46453.1| type I secretion target GGXGXDXXX repeat protein [Synechococcus sp.
CC9311]
Length = 405
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 16/178 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + I G+D+L G N L I G E N +
Sbjct: 184 DTVYGWFGDDQ-------IQGGNGNDML----YGQQGNDGILGDNGNDYIDGGEGNDYLD 232
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T + + G+SG+D + G ++ + G D+ G +G D + + +
Sbjct: 233 GGTGNDLMFGASGDDRMWGGDGHDSMYAGEGRDILSGGNGNDVLDGGQGNDVLTGGSGAD 292
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D + D D+ + S+ EY + + + +
Sbjct: 293 TFVF----SGGMDVVKDFNWFE-GDRINLAGFQGTVSVKEYVDASGTVHTAVSKSADN 345
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 41/127 (32%), Gaps = 2/127 (1%)
Query: 257 EKNMTIAQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E I T V++ V G G+D V G ++ +GND+ G G D +
Sbjct: 162 EGGDDIVHGTRVMDQVSGGDGHDTVYGWFGDDQIQGGNGNDMLYGQQGNDGILGDNGND- 220
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
Y N + S +R+ D + R IL + L
Sbjct: 221 YIDGGEGNDYLDGGTGNDLMFGASGDDRMWGGDGHDSMYAGEGRDILSGGNGNDVLDGGQ 280
Query: 376 GQDVFES 382
G DV
Sbjct: 281 GNDVLTG 287
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 16/164 (9%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + T+ + + G +GND++ G N+ +GND DG G D
Sbjct: 177 VSGGDGHDTVYGWFGDDQIQGGNGNDMLYGQQGNDGILGDNGNDYIDGGEGNDYLDGGTG 236
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYE 369
+ L F + D + E L + + +L + +
Sbjct: 237 NDL----MFGASGDDRMWGGDGHDSMYAGEGRDILSGGNGNDVLDGGQGNDVLTGGSGAD 292
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT---FDSYLYLGSYDD 410
+ G DV + +F EG I F + + Y D
Sbjct: 293 TFVFSGGMDVVK------DFNWFEGDRINLAGFQGTVSVKEYVD 330
>gi|222147144|ref|YP_002548101.1| Hemolysin-type calcium-binding protein [Agrobacterium vitis S4]
gi|221734134|gb|ACM35097.1| Hemolysin-type calcium-binding protein [Agrobacterium vitis S4]
Length = 833
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 5/182 (2%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+Y + D+ + YD+ L D T+ GG N + +I G + + +I
Sbjct: 2 VYILGGSGNDTITGTSDYDNLSGGLGDDTINGGAGNDVLSGNGGNDAISGEDGSDSIRGG 61
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-- 323
+ +S+ G G D + G + N+ +GNDV +G +G D + +
Sbjct: 62 SGNDSLSGGDGVDTLYGEAGNDSLSGDAGNDVLNGGAGADILNGGDGTDTVNYTSSDAIN 121
Query: 324 ---AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A V + + D +E + + Q V +I + + + G D
Sbjct: 122 INLATGVASGGDAQGDTFVSIEVISASSQDDVLVGDDNDNIFKGGDGSDTIHGGDGDDTL 181
Query: 381 ES 382
Sbjct: 182 AG 183
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 5/143 (3%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+L + Y + D + T G D+LD NY D ++ +
Sbjct: 530 NLEGSTYADSLTGDDQANVLT--GRTGADILDGGAGSDTANYSDSTEGVIINLVTGQTAG 587
Query: 261 TIAQHTV---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
A+ V IE+V GS D + GN +NV G+D G G D + + +
Sbjct: 588 GSAEGDVLVSIENVTGSGEADYLTGNDGSNVLSGGEGDDHLIGGGGDDLLNAGSGANILD 647
Query: 318 IYRFENAIIVYDANEHKQDFLSD 340
+ D++ LS
Sbjct: 648 GGDGSDTASYADSSVGISASLSG 670
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 9/158 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G D L ++L T + S GGY TI IE++ GS+ D + G+
Sbjct: 491 AAGSDTASY-LDSTSAVTVNLQTRTLS--GGYANGDTIIS---IENLEGSTYADSLTGDD 544
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
NV +G D+ DG +G DT Y + I + D L +E +
Sbjct: 545 QANVLTGRTGADILDGGAGSDTANYSDSTEGVIINLVTGQTA---GGSAEGDVLVSIENV 601
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + ++L + LI G D+ +
Sbjct: 602 TGSGEADYLTGNDGSNVLSGGEGDDHLIGGGGDDLLNA 639
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ I+ + + +GG+ + + + ++L T S G + ++ I
Sbjct: 170 DTIHGGDGDDTLAGGFDADVINGGNGSDTASFVDNMAVVVNLKTGEMS--GDAQGDVLID 227
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+++GS +D + G+ NNV G D+ DG G DT A +Y + N
Sbjct: 228 ----IENLMGSYYDDTLTGDDGNNVIDGYYGWDLLDGGLGADTLKGGA-DGGAAVYTYSN 282
Query: 324 AIIVYDANEHK 334
+ + +
Sbjct: 283 EAVQINIDTGI 293
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 20/189 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ G D ++ T I+L T S G + + ++ IE
Sbjct: 91 NDVLNGGAGADILNGGDGTDTVNYT--SSDAININLATGVASG-GDAQGDTFVS----IE 143
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ SS +DV++G+ +N+F G+D G G DT + + + D
Sbjct: 144 VISASSQDDVLVGDDNDNIFKGGDGSDTIHGGDGDDTLAGGFDADVINGGNGSDTASFVD 203
Query: 330 -------------ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + D L D+E L + ++++ ++ L +G
Sbjct: 204 NMAVVVNLKTGEMSGDAQGDVLIDIENLMGSYYDDTLTGDDGNNVIDGYYGWDLLDGGLG 263
Query: 377 QDVFESMKH 385
D +
Sbjct: 264 ADTLKGGAD 272
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G G+DV+ ++ ++ G+D G G D F Y + I+ F+++
Sbjct: 723 DSLHGDGGDDVLYADAGDDTLAGGEGDDALYGGEGSDVFVYSSNYGNDVIFDFDSSADTI 782
Query: 329 DANEHKQDFLSD 340
D + +SD
Sbjct: 783 DLTDMGFATVSD 794
Score = 45.1 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 53/170 (31%), Gaps = 6/170 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESV 271
+ T+ G D L +Y D + ++ AQ IES+
Sbjct: 402 GNNGNDTLIGGAGADKLSGGGGNDTSSYRDSTSAVTVNLATGLAQGGFAQGDTFISIESL 461
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
GS+ ND + GN +N G DV DG++G DT Y
Sbjct: 462 EGSAYNDTLTGNRESNTLRGGDGGDVLDGAAGSDTASY---LDSTSAVTVNLQTRTLSGG 518
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D + +E L + Q ++L + L G D
Sbjct: 519 YANGDTIISIENLEGSTYADSLTGDDQANVLTGRTGADILDGGAGSDTAN 568
>gi|254467758|ref|ZP_05081165.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
gi|206684195|gb|EDZ44681.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
Length = 303
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 8/170 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ T + G+D L G + L + G + + +
Sbjct: 121 GGNDILRLGAGNDTAWGGAGNDTL----TGAGGDDRLLGGGGRDLLQGGDGSDELIGGGG 176
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G S ND ++GN N+ F +GND G SG DT L + A +
Sbjct: 177 RDKLAGGSENDTLLGNKGNDKLFGGAGNDTLRGGSGQDTLKGGQSDDL--LTGGAGADVF 234
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ D ++D E D+ + +++ ED+ G
Sbjct: 235 VFSRNDHTDVITDFEI--GIDKIHVKSGASGMNGVDFDQQGEDVFVYFGN 282
>gi|56697211|ref|YP_167575.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56678948|gb|AAV95614.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 464
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 2/152 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D DL + N+I+ T ++ G + +I + +S G +GNDV+ G +
Sbjct: 45 GTDGHDLLQGNDLANWINGGTGDD-TLSGAGGDDSIFAGSGNDSADGGTGNDVLRGKDGD 103
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ +G+D+ GS+GLD A + + F + ++ + D + + +
Sbjct: 104 DTLTGGAGDDLLHGSTGLDVLSGGAGTDTLQ-GGFGGDRLFGNSGDDSLDGGAGSDLIFG 162
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + +L + L G D
Sbjct: 163 GDGNDSADGGTGDDVLRGQGGDDTLSGGDGAD 194
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 5/165 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
S + + G D L G + + N+ S + G + I +S G
Sbjct: 116 HGSTGLDVLSGGAGTDTL---QGGFGGDRLFGNSGDDS-LDGGAGSDLIFGGDGNDSADG 171
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+DV+ G ++ G D+ GS+GLD + A S + + + A +
Sbjct: 172 GTGDDVLRGQGGDDTLSGGDGADLLHGSTGLDHLYGDAGSDTL-LGGYGGDHLSGGAGDD 230
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + + + ++ L + L G D
Sbjct: 231 SLDGGVGPDVINAGEGNDTALGGTGDDRLSGQDGDDSLSGGDGAD 275
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 38/120 (31%), Gaps = 4/120 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
S + +Y G D L +GG S+ G I ++ +G
Sbjct: 197 HGSTGLDHLYGDAGSDTL----LGGYGGDHLSGGAGDDSLDGGVGPDVINAGEGNDTALG 252
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+D + G ++ G D+ G G D + +++ N+
Sbjct: 253 GTGDDRLSGQDGDDSLSGGDGADLLRGGLGRDVLLGGNQNDTLLGGYGPDSLYGEAGNDS 312
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 8/142 (5%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S G + + + + + + G +G+D + G ++ F SGND DG +G D
Sbjct: 37 PTSDREFSGTDGHDLLQGNDLANWINGGTGDDTLSGAGGDDSIFAGSGNDSADGGTGNDV 96
Query: 307 FFYYAPSYLYKIYRF-----ENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQ 358
+ + + D L +RL
Sbjct: 97 LRGKDGDDTLTGGAGDDLLHGSTGLDVLSGGAGTDTLQGGFGGDRLFGNSGDDSLDGGAG 156
Query: 359 RSILEYTASYEDLIQVIGQDVF 380
++ + G DV
Sbjct: 157 SDLIFGGDGNDSADGGTGDDVL 178
>gi|218248619|ref|YP_002373990.1| RTX cytolytic toxin protein A [Cyanothece sp. PCC 8801]
gi|218169097|gb|ACK67834.1| RTX cytolytic toxin protein A [Cyanothece sp. PCC 8801]
Length = 1394
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA + + + G+SGND++ GNS N+ ++G+DV G +G D + +
Sbjct: 1268 IAGTSADDLINGTSGNDILTGNSGNDTLIGNAGDDVLTGGTGNDLLSGGSGGDTFNYQLG 1327
Query: 322 ENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRS 360
+ + + D L+ + ++F Q D+ +
Sbjct: 1328 DGSDRIQDFQSGDTINLTGINASSVQFIGQGSDTFVTTGNN 1368
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDGS 301
I G N + ++ ++++G++G+DV+ G + N++ SG D
Sbjct: 1277 INGTSGNDILTGNSGNDTLIGNAGDDVLTGGTGNDLLSGGSGGDTFNYQLGDGSDRIQDF 1336
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
DT + + + + ++ L +
Sbjct: 1337 QSGDTINLTGINASSVQFIGQGSDTFVTTGNNQGILLEGI 1376
>gi|163735885|ref|ZP_02143313.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
gi|161390821|gb|EDQ15162.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
Length = 978
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 64/221 (28%), Gaps = 23/221 (10%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
++ G+D L+ GG N + I G E N I +++VG GND+
Sbjct: 674 DILFGEDGNDTLE----GGNGNDRLFGGKGNDEISGGEGNDVIVGKAGNDNLVGDGGNDI 729
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYRFENAIIVYD-- 329
++GN N+ +G+D +G D Y + + ++V
Sbjct: 730 ILGNFGNDFLTGGAGDDALYAGAGNDNLDGSEGNDQLYGGDGDDFVFGGTGDDLLVGSEG 789
Query: 330 ----ANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L + + + ++ + L G DV
Sbjct: 790 ADTLVGSDGNDTLRGGNGDDFVTGLNDDDVLFGGDGDDLILGGDGNDRLWGGTGDDVLTG 849
Query: 383 MK--HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
G + D+ D+ F A
Sbjct: 850 GARRDILHGGAGNDTFVFDDTSDSQQLSVDVIKDFEGAGSA 890
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 55/185 (29%), Gaps = 12/185 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE----------SWSSIGGYE 257
+ S I G D +D + IDL + ++
Sbjct: 577 GDDTVIISSGLPSYIRGGEGVDTIDAS-ASDFDFTIDLYDGYLESNLFIFDGFENLFTGS 635
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++ V + G +G+D + G ++ F G+D+ G G DT +
Sbjct: 636 GDDVLSGTDVDNRIGGGAGDDQIFGRGGDDSLFGEDGDDILFGEDGNDTLEGGNGNDRLF 695
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + I + N+ + + L + L A + L G
Sbjct: 696 GGKGNDEISGGEGNDVIVGKAGN-DNLVGDGGNDIILGNFGNDFLTGGAGDDALYAGAGN 754
Query: 378 DVFES 382
D +
Sbjct: 755 DNLDG 759
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 4/117 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + + I + + +GND ++ N+ F +G D +G SG DT
Sbjct: 509 TITGTDGDNLIVSGAGSDVIYAGAGNDTILAEWGNDTVFAGAGADHVNGGSGNDTIITSG 568
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
E+ + ++ E + D + Y S
Sbjct: 569 N----DFAAGESGDDTVIISSGLPSYIRGGEGVDTIDASASDFDFTIDLYDGYLESN 621
Score = 38.6 bits (88), Expect = 4.0, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 53/181 (29%), Gaps = 56/181 (30%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S T+ S G+D L G LN + + G + + I + + G
Sbjct: 786 GSEGADTLVGSDGNDTLR--GGNGDDFVTGLNDDDV--LFGGDGDDLILGGDGNDRLWGG 841
Query: 275 SGNDVVIGNSANNVFFESSGNDV--------------------------------FDG-- 300
+G+DV+ G + ++ +GND G
Sbjct: 842 TGDDVLTGGARRDILHGGAGNDTFVFDDTSDSQQLSVDVIKDFEGAGSAVGDVIDLSGID 901
Query: 301 ------SSGL------------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+G D F + A + + + + D ++ DF+ +E
Sbjct: 902 ADITVAGNGDQSFTFLGVATREDGFAFGAGALWVSFFGGQTRVFALDDDDKTIDFVVWIE 961
Query: 343 R 343
Sbjct: 962 D 962
>gi|297690077|ref|XP_002822453.1| PREDICTED: collagenase 3-like isoform 2 [Pongo abelii]
Length = 489
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHNGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|255959000|gb|ACU43588.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae]
Length = 956
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D ++L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-GGQDKLAFSDVNLKDLTF 821
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|126208432|ref|YP_001053657.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae L20]
gi|126097224|gb|ABN74052.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 956
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D + L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-GGQDTLAFSDVNLKDLTF 821
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDTLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDTLAFSDVN 815
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDTLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|73621155|sp|Q9EV30|LKA2A_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762036|gb|AAG40296.1|AF314512_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FRGSKFNDAFQGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGRG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRKGDGNDIISDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 35/107 (32%), Gaps = 8/107 (7%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T IE ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 709 TTIEEIIGTSHNDIFRGSKFNDAFQGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGD 765
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D D L D I+ + + L
Sbjct: 766 DFIDGG-KGNDLLHGGR----GDDIFVHRKGDGNDIISDSDGNDKLS 807
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 6/108 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I+ I + +D+ + D +I G + N + + + G +G
Sbjct: 709 TTIEEIIGTSHNDIFRGSKFNDAFQGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE 322
+D + G N++ G+D+F G D +
Sbjct: 765 DDFIDGGKGNDLLHGGRGDDIFVHRKGDGNDIISDSDGNDKLSFSDSN 812
>gi|254409670|ref|ZP_05023451.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196183667|gb|EDX78650.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 496
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 20/202 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD----LLDLTLIGGVKNYIDLNTESWSSIG 254
KG LG++ Y ++ K I++ GG D + TL +N + + + S + G
Sbjct: 55 KGGLGDDTYIVDSDDKPDNLIES--SGGGFDKVISTVSWTLGRNFENLLLVGSGSINGTG 112
Query: 255 GYEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N + +E+++ GND + G N++ +GND +G G D
Sbjct: 113 NNLNNRIL--GNAVENILDGREGNDSLNGYQGNDILIGGAGNDKLNGGEGNDDMTGGVGD 170
Query: 314 YLY-----------KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y + + V + + ++VE L + + + +
Sbjct: 171 DSYFVDSLLDQVNENFGEGNDVVFVVNTAANNYTLPANVEALFLREGVRNGNGNDLNNYI 230
Query: 363 EYTASYEDLIQVIGQDVFESMK 384
+ + L G D ++
Sbjct: 231 QGNSLDNILTGGAGNDFLNALG 252
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 33/106 (31%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
I + + + + G + T+ + + ++G + ND ++G ++ SG
Sbjct: 312 GTANDNGTILIGNDESNILTGGVGSDTLEGNAGNDELLGGASNDELVGGVGDDELTGGSG 371
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+D +G G D S + +
Sbjct: 372 SDRLEGGEGNDRLIGDLGSDDGVDAWIGGSGSDLFVLGFGNTTFYN 417
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 2/102 (1%)
Query: 261 TIAQHTVIES--VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+AQ +E ++G G+D +IG N+ G+D+ G G DT+ + +
Sbjct: 15 ALAQGFGLEDNLIIGGLGDDTLIGGRRNDRLVGGIGSDIMKGGLGDDTYIVDSDDKPDNL 74
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + E L + +
Sbjct: 75 IESSGGGFDKVISTVSWTLGRNFENLLLVGSGSINGTGNNLN 116
>gi|170738486|ref|YP_001767141.1| hemolysin-type calcium-binding region [Methylobacterium sp. 4-46]
gi|168192760|gb|ACA14707.1| Hemolysin-type calcium-binding region [Methylobacterium sp. 4-46]
Length = 534
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 11/132 (8%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I ++ IQ ++ GG+D+L L G +L G N +
Sbjct: 90 ITGGTATVANTGLIQ-VFGQGGNDVLTLNEANGALPRANL--------FGGAGNDVMTGG 140
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G +GND ++G ++ F +GNDV G G D F A ++
Sbjct: 141 SGNDMLFGQAGNDTLLGKGGADLLFGGAGNDVLTGGDGDDQVFGEAGDD--RMIWNPGDD 198
Query: 326 IVYDANEHKQDF 337
D
Sbjct: 199 TDLFEGGDGTDT 210
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 59/199 (29%), Gaps = 34/199 (17%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T++ D+ + L+ I +N + +T + V G
Sbjct: 56 GNGTATVFGDSLDNTVTLSRN--AAGQILVNGGAVP----ITGGTATVANTGLIQVFGQG 109
Query: 276 GNDVV--------------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
GNDV+ G + N+V SGND+ G +G DT + L F
Sbjct: 110 GNDVLTLNEANGALPRANLFGGAGNDVMTGGSGNDMLFGQAGNDTLLGKGGADLL----F 165
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A D + D + + E D +V G + E
Sbjct: 166 GGAGNDVLTGGDGDDQVFG----EAGDDRMIWNPGDDTDLFEGGDG-TDTAEVNGGNGAE 220
Query: 382 SMKHFYEFGLSEGRDITFD 400
+ + G + FD
Sbjct: 221 TFAL-----TANGTRVRFD 234
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ G +GNDV+IG + G+DV G GLD S +
Sbjct: 486 TADGGAGNDVLIGGPGPDTLLGGEGDDVLIGGPGLDVLDGGLGSNV 531
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ G+++ ++ + D G D D LI G+ D+ S + G
Sbjct: 425 NGTAGDDVIQLIAGSDGIRVLGLAAEIDIVGFDPSDRLLINGLGGD-DVIEASGLTATGM 483
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+T + ++G G D ++G ++V G DV DG G +
Sbjct: 484 L--LTADGGAGNDVLIGGPGPDTLLGGEGDDVLIGGPGLDVLDGGLGSNVVI 533
Score = 40.9 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 11/142 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTESWSSIGGY 256
G+ EV + + +G D +L G I +N
Sbjct: 205 GDGTDTAEVNGGNGAETFALTANGTRVRFDRLDPAPFSLDIGTTERIVVNMNGGDDRFSA 264
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N+ ++ G SGND ++G++ ++ GNDV DG G D A +
Sbjct: 265 TGNLAALIGVTVD---GGSGNDTILGSNGGDLLLGGDGNDVVDGQQGSDVAMLGAGDDTF 321
Query: 317 KIYRFENAIIVYDANEHKQDFL 338
+ + + +V + D L
Sbjct: 322 QWDPGDGSDVVE--GQAGSDTL 341
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 14/45 (31%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G + N+V G D G G D + N +I
Sbjct: 489 GGAGNDVLIGGPGPDTLLGGEGDDVLIGGPGLDVLDGGLGSNVVI 533
>gi|123968968|ref|YP_001009826.1| hypothetical protein A9601_14361 [Prochlorococcus marinus str.
AS9601]
gi|123199078|gb|ABM70719.1| Hypothetical protein A9601_14361 [Prochlorococcus marinus str.
AS9601]
Length = 4723
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 3/131 (2%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
N + ++ T+ D + +T GG N + + + + ++ G + N
Sbjct: 281 TDNEGHSEQITTVSKDIFFTVAD---NTTEGITASGGSGNDLLIGSRNNDTLKGLDGNDE 337
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I +++ G G+D + G N+ + + G D G G D + +
Sbjct: 338 IYGGDGDDNIEGGYGDDTIYGGGGNDTLYGNEGTDAIYGGDGNDQIYAGSSGGAETSNTN 397
Query: 322 ENAIIVYDANE 332
E I ++
Sbjct: 398 EQLIDAGSGDD 408
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 4/188 (2%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---GVKNYIDLNTESWSSIG 254
G++ + ++ + + Y + D G + + +++
Sbjct: 474 NNSGTGSSTWGYAIKNVEKITFRDSYYANLGDQAAGDGEGIEVDASTRENSSDGTFTVGS 533
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+E ++T ++ V G+DV+ S +++ + G++ DG G D
Sbjct: 534 TFEGDITFKGSAGVDIVTLGKGDDVLTLGSGDDIVYSGLGSNTIDGGEGTDIVTITGNEA 593
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y I + + + +VE ++F D S+ V L A ++
Sbjct: 594 QYTETTSGLYTIFTKNDSLEITKIINVETVKFQDNSTKSIPVP-DQTLNGDADNNEISGA 652
Query: 375 IGQDVFES 382
G D
Sbjct: 653 GGDDSING 660
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 4/188 (2%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---GVKNYIDLNTESWSSIG 254
G++ + ++ + + Y + D G + + +++
Sbjct: 812 NNSGTGSSTWGYAIKNVEKITFRDSYYANLGDQAAGDGEGIEVDASTRENSSDGTFTVGS 871
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+E ++T ++ V G+DV+ S +++ + G++ DG G D
Sbjct: 872 TFEGDITFKGSAGVDIVTLGKGDDVLTLGSGDDIVYSGLGSNTIDGGEGTDIVTITGNEA 931
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y I + + + +VE ++F D S+ V L A ++
Sbjct: 932 QYTETTSGLYTIFTKNDSLEITKIINVETVKFQDNSTKSIPVP-DQTLNGDADNNEISGA 990
Query: 375 IGQDVFES 382
G D
Sbjct: 991 GGDDSING 998
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 48/150 (32%), Gaps = 1/150 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G N SI GY N T+ + + G G+D + G ++ +
Sbjct: 637 DQTLNGDADNNEISGAGGDDSINGYGGNDTLKGLDGNDEIYGGDGDDNIEGGYGDDTIYG 696
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND G+ G D + + A + NE D S +R+
Sbjct: 697 GGGNDTLYGNEGTDAIYGGDGNDQIYAGSSGGA-ETSNTNEQLIDAGSGDDRMYIRSGSK 755
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + L G D E
Sbjct: 756 NVKILAGDGDDHIDGDFRYLDAGSGDDFIE 785
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 48/150 (32%), Gaps = 1/150 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G N SI GY N T+ + + G G+D + G ++ +
Sbjct: 975 DQTLNGDADNNEISGAGGDDSINGYGGNDTLKGLDGNDEIYGGDGDDNIEGGYGDDTIYG 1034
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND G+ G D + + A + NE D S +R+
Sbjct: 1035 GGGNDTLYGNEGTDAIYGGDGNDQIYAGSSGGA-ETSNTNEQLIDAGSGDDRMYIRSGSK 1093
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + L G D E
Sbjct: 1094 NVKILAGDGDDHIDGDFRYLDAGSGDDFIE 1123
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 62/165 (37%), Gaps = 5/165 (3%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---GVKNYIDLNTESWSSIG 254
G++ + ++ + + Y + D G + + +++
Sbjct: 1150 NNSGTGSSTWGYAIKNVEKITFRDSYYANLGDQAAGDGEGIEVDASTRENSSDGTFTVGS 1209
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+E ++T ++ V G+DV+ S +++ + G++ DG G DT Y
Sbjct: 1210 TFEGDITFKGSAGVDIVTLGKGDDVLTLGSGDDIVYSGLGSNTIDGGEGEDTVIYSGTKD 1269
Query: 315 LYKIYRFENAI--IVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
Y I + + + + + +D L+ ++ + F+D +
Sbjct: 1270 SYTIQYEVSNLFETISVSKDSNKDLLTSIKTISFSDADVQLEVTG 1314
>gi|73808268|ref|NP_071405.2| matrix metalloproteinase-27 precursor [Homo sapiens]
gi|296437372|sp|Q9H306|MMP27_HUMAN RecName: Full=Matrix metalloproteinase-27; Short=MMP-27; Flags:
Precursor
gi|147897941|gb|AAI40434.1| Matrix metallopeptidase 27 [synthetic construct]
gi|261857924|dbj|BAI45484.1| matrix metallopeptidase 27 [synthetic construct]
Length = 513
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 60/189 (31%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T E + L WSKV L F + S +DI
Sbjct: 106 WRKYNLTYRIINYTPDMAR-------AAVDEAIQEGLEVWSKVTPLKFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D Y + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPRK-YPLS--QDD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 INGIQSIYG 261
>gi|158337554|ref|YP_001518729.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158307795|gb|ABW29412.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 909
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 6/182 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ S Q + GG+D L + +L GG N + G + N +
Sbjct: 401 DANNWMRGSDRNQYMEGRGGNDTLRGAGGNDSLYGGTGNDHLHGEVGNDDLYGGDGNDLL 460
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T + G + ND ++G N+ +G DV G G DT A +
Sbjct: 461 DGGTGDDKFNGGNDNDTLVGQDGNDNLNGGAGLDVLYGGDGDDTLNGGAGNDSLWGSSGN 520
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + ++ L D + L + + L + L+ G D
Sbjct: 521 DRLYGLEGDDRLDGALGD-DNLNGGEGNDTLAGGEGNDTLYGDIGQDRLLGADGNDTLNG 579
Query: 383 MK 384
Sbjct: 580 AA 581
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 5/178 (2%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTI 262
+++Y + +GG+D + TL+G N +LN + + G + + T+
Sbjct: 449 DDLYGGDGNDLLDGGTGDDKFNGGND--NDTLVGQDGND-NLNGGAGLDVLYGGDGDDTL 505
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+S+ GSSGND + G ++ + G+D +G G DT + +
Sbjct: 506 NGGAGNDSLWGSSGNDRLYGLEGDDRLDGALGDDNLNGGEGNDTLAGGEGNDTLYGDIGQ 565
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ++ D N+ D E LR L + + L D
Sbjct: 566 DRLLGADGNDTLNGAAGDDE-LRGDGGDDSLYGDVGNDSLYGGSGSDTLSGGNDADSL 622
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 8/126 (6%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ GDD L L D N + W N I +S+ G +G
Sbjct: 707 AGNDALWGGSGDDYLAGGLGNDSHWGEDGNDQIW----AAAGNDLIYGGKGQDSLGGGAG 762
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + G N++ GND G +G DT + R +++ H D
Sbjct: 763 NDSLHGGDGNDLLSSQDGNDWLMGDAGNDTLRGEGGNDTLTGGRGNDSVE----GGHGND 818
Query: 337 FLSDVE 342
L V+
Sbjct: 819 LLMGVD 824
>gi|52630374|gb|AAU84700.1| ApxIIA [Actinobacillus pleuropneumoniae]
Length = 956
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D ++L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-GGQDKLAFSDVNLKDLTF 821
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|327285686|ref|XP_003227564.1| PREDICTED: matrix metalloproteinase-14-like, partial [Anolis
carolinensis]
Length = 542
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 61/203 (30%), Gaps = 56/203 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
WS+Y + + T + + R A W V L F E S
Sbjct: 83 WSHYDLTFCIQNYTPKVG--EHATFSA-----IRRAFNVWQSVTPLRFREVSYSLVREGH 135
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + + +FD A+ W R G
Sbjct: 136 EPQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPHIGGDTHFDAAEPWTSRNDDLNGN 195
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
+ A+HE+GHALGL H + +M+ F +
Sbjct: 196 DIFLVAVHELGHALGLEHSNDPSA-------------------IMAPFYQWMDTENFE-- 234
Query: 179 YCATPMVSDIVAVQKIYGAPKGS 201
D +Q++YG+ G
Sbjct: 235 ----LPEDDRRGIQQLYGSEMGH 253
>gi|221101333|ref|XP_002164979.1| PREDICTED: similar to matrix metalloproteinase, partial [Hydra
magnipapillata]
Length = 449
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 78/215 (36%), Gaps = 48/215 (22%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLT 69
+ H R + ++ ++K LT L+ + L+ + ++ + A W V +L
Sbjct: 51 DNSRLHDTRIRRYTPQGSKWKKSDLTWKLLNDNNDNLSRSQVEDTLQQAFARWEAVTNLR 110
Query: 70 FE--ETSIH--SDI------KF--------ISSNNGYV----CTPRYDSRYFMEINFDKA 107
F E + + +DI +F + G V P + +++F
Sbjct: 111 FHKLEKNSNEYADIDVSFLYRFQQQQRDPSLFYGAGIVLAHGYYPNTNKGISGDLHFYDE 170
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ G KG L A+HEIGH +GL H N S+M +
Sbjct: 171 THFTLGTTKGINLLWVAVHEIGHCIGLEHSSVEN-------------------SIM--YP 209
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
M SF T DI+ +Q IYG K +
Sbjct: 210 RYKGYMGESF----TLSKDDILGIQSIYGFKKQTT 240
>gi|114640104|ref|XP_001153704.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
Length = 464
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 57/195 (29%), Gaps = 48/195 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNHTPDLPR-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D + G+ Y + +I+FD + W GT L A HE
Sbjct: 161 SFAVKEHGDF-YSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHE 218
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + +M Y + A F D
Sbjct: 219 LGHSLGLFHSANTEA-------------------LM-YPLYNSFTELAQFRLSQ----DD 254
Query: 188 IVAVQKIYGAPKGSL 202
+ +Q +YG P S
Sbjct: 255 VNGIQSLYGPPPAST 269
>gi|291242299|ref|XP_002741045.1| PREDICTED: matrix metalloproteinase, putative-like [Saccoglossus
kowalevskii]
Length = 509
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 64/197 (32%), Gaps = 55/197 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIK 80
W + Y T + E+A+ A WS V LTF +DIK
Sbjct: 124 WDKTDLTYDIIQYTPDLPQSKVDS------EIAK-AFKLWSDVTALTFSRVHGDDTADIK 176
Query: 81 ------FISSNNGY--------------VCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
FI +GY P + +FD + W +GT L
Sbjct: 177 ISFPAPFIPHEDGYWKTTFDGPGKVLAHAFFPSNYGDIKGDAHFDDGENWTADTYEGTNL 236
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
A HE GH+LGL H G +Y + Y+ + LTS
Sbjct: 237 WLVAAHEFGHSLGLAHSDVI--GSLMYPYYSGYKPNFQLTS------------------- 275
Query: 181 ATPMVSDIVAVQKIYGA 197
DI +Q +YGA
Sbjct: 276 -----DDIAGMQSLYGA 287
>gi|237808030|ref|YP_002892470.1| Hemolysin-type calcium-binding region [Tolumonas auensis DSM 9187]
gi|237500291|gb|ACQ92884.1| Hemolysin-type calcium-binding region [Tolumonas auensis DSM 9187]
Length = 1368
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 45/145 (31%), Gaps = 5/145 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYE---KNMTIAQHTVIESVVGSSGNDVVIGN 283
G D L+ + L S + N + + + G +GND + G
Sbjct: 1173 GHDQEWLSPDTDGGEFTSLTPTPGSGVTDLHYGGGNDAVYGTVYNDGIFGDAGNDFIDGR 1232
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ ++ SG DV G G DT + + + A+ D ++D
Sbjct: 1233 AGDDTLHGGSGEDVLLGGYGTDTLIGDLGNDILTGGDGADIFTWTSADIGSSDTITDFSI 1292
Query: 344 LRFA--DQCIDSVNVKQRSILEYTA 366
+ D N + Y +
Sbjct: 1293 AQHDMLDLTDVLTNEPANDLTNYLS 1317
>gi|260836059|ref|XP_002613024.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
gi|229298407|gb|EEN69033.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
Length = 494
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 63/195 (32%), Gaps = 50/195 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L + W + Y+ L D E+ ++ A W +V L F TS S
Sbjct: 96 LTGRKWDKTHLTYR---LINTSPQLDRAEV----EDAIYRAFRIWEQVTPLRFSRTSGTS 148
Query: 78 DIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI+ + P + +FD+++ W +GT L
Sbjct: 149 DIEISFVQFSHGDGNPFDGRGGTLAHAYFPGTGIGG--DAHFDESEQWTVRTARGTNLFI 206
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH+LGL H +M Y Q + D Y
Sbjct: 207 VAAHEFGHSLGLEHSQVLGA-------------------LM-YPFYQGYVEDFQLDY--- 243
Query: 183 PMVSDIVAVQKIYGA 197
DI+ +Q IYG
Sbjct: 244 ---DDILGIQTIYGT 255
>gi|27806003|ref|NP_776816.1| matrix metalloproteinase-20 precursor [Bos taurus]
gi|12585267|sp|O18767|MMP20_BOVIN RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|2326212|gb|AAB66599.1| enamel metalloproteinase precursor [Bos taurus]
Length = 481
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 63/190 (33%), Gaps = 42/190 (22%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNG 87
++K + LT + + AL WS V L F + +DI
Sbjct: 114 KWKKNTLTYRISKYTPSMTPAEVDRAMEMALRAWSSAVPLNFVRINAGEADIMISFETGD 173
Query: 88 YVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + +D + +FD A+ W G G L A HE GHALGL
Sbjct: 174 HGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN-GFNLFTVAAHEFGHALGL 232
Query: 135 MHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H + +P Y N Y + +P+D D+ +Q
Sbjct: 233 AHSTDPSALMFPTYKYQNPYG----------FRLPKD----------------DVKGIQA 266
Query: 194 IYGAPKGSLG 203
+YG + G
Sbjct: 267 LYGPRRAFSG 276
>gi|296216045|ref|XP_002754391.1| PREDICTED: neutrophil collagenase [Callithrix jacchus]
Length = 465
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 55/196 (28%), Gaps = 51/196 (26%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SD 78
D W + Y+ T + + + A WS LTF S +D
Sbjct: 105 DPKWEQTDLTYRIINYTPQLSE------TEVERAIGK-AFKVWSDASPLTFTRISQGEAD 157
Query: 79 IKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
I +N P + +FD + W K L A
Sbjct: 158 INIAFFQRDHGDNSPFDGPNGILAHAFQPGRGIGGDAHFDAEETWT-NTSKNYNLFLVAA 216
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H +M + +F +T +
Sbjct: 217 HEFGHSLGLSHSSDPGA-------------------LM--------YPNYAFRDPSTYSL 249
Query: 186 --SDIVAVQKIYGAPK 199
DI +Q IYG
Sbjct: 250 PQDDINGIQAIYGPSS 265
>gi|257061684|ref|YP_003139572.1| PKD domain containing protein [Cyanothece sp. PCC 8802]
gi|256591850|gb|ACV02737.1| PKD domain containing protein [Cyanothece sp. PCC 8802]
Length = 1502
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMT----IAQHTVIESVVGSSGNDVVIGNSANNV 288
N L+ ++ +++ + ++T +A + + + G+SGND++ GNS N+
Sbjct: 1343 FIGASTSTNTAALSPQTTTTVPTSDNSLTQMTTLAGTSADDLMNGTSGNDILTGNSGNDT 1402
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++GNDV GS+G D F + + + + + D + L++++
Sbjct: 1403 LIGNAGNDVITGSTGNDLLFGGSGADTFNYQLGDGQDTIDDFETGDKLRLTNID 1456
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 11/100 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDGS 301
+ G N + ++ ++++G++GNDV+ G++ N++ F SG D D
Sbjct: 1385 MNGTSGNDILTGNSGNDTLIGNAGNDVITGSTGNDLLFGGSGADTFNYQLGDGQDTIDDF 1444
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
D + D ++ L D+
Sbjct: 1445 ETGDKLRLTNIDPTSVQLMGQGTGTFIDLGNNQGIVLRDI 1484
>gi|149200754|ref|ZP_01877729.1| hypothetical protein RTM1035_14052 [Roseovarius sp. TM1035]
gi|149145087|gb|EDM33113.1| hypothetical protein RTM1035_14052 [Roseovarius sp. TM1035]
Length = 783
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 9/204 (4%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLL-----DLTLIGGVK 240
+ Q+ + A + G+++ + + ++ GDD + D L
Sbjct: 487 ASAQERWSALFSNGGSSLTTLSDAGELALAGAGNDSVAGGAGDDTIEGGSGDDVLAASAG 546
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N + L IGG + TI + + GND+V G N++ +G+D +G
Sbjct: 547 NDVVLGEAGNDRIGGGLGDDTIDGGAGDDVIGAGQGNDIVEGGDGNDLISGGAGDDTLNG 606
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ D+ S + +I A + + + + + D
Sbjct: 607 GADNDSISGSFGSDSIDAGA-GDDVIGGGAGRDTIEGGAGDDVIGGGEGDDDLFGSDGND 665
Query: 361 ILEYTASYEDLIQVIGQDVFESMK 384
+ + ++ G D
Sbjct: 666 FIAGGGRNDFILGGAGDDTINGGA 689
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 57/192 (29%), Gaps = 11/192 (5%)
Query: 200 GSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSS 252
G G+++ + I GDD L D I G ++ +
Sbjct: 570 GGAGDDVIGAGQGNDIVEGGDGNDLISGGAGDDTLNGGADNDSISGSFGSDSIDAGAGDD 629
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IGG TI + + G G+D + G+ N+ ND G +G DT A
Sbjct: 630 VIGGGAGRDTIEGGAGDDVIGGGEGDDDLFGSDGNDFIAGGGRNDFILGGAGDDTINGGA 689
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ I V+ NE ++ + + Y D
Sbjct: 690 GND---IMSGGEGADVFVFNEFVAGSFENITDFEAGVDTVFIRVDGLDNGGNGLQGYLDA 746
Query: 372 IQVIGQDVFESM 383
+ ++ D
Sbjct: 747 LGIVDTDQGAQF 758
>gi|62897055|dbj|BAD96468.1| matrix metalloproteinase 13 preproprotein variant [Homo sapiens]
Length = 471
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGPLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|4505209|ref|NP_002418.1| collagenase 3 preproprotein [Homo sapiens]
gi|1168998|sp|P45452|MMP13_HUMAN RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|516386|emb|CAA53056.1| collagenase 3 [Homo sapiens]
gi|1495425|emb|CAA57108.1| collagenase-3 [Homo sapiens]
gi|45768659|gb|AAH67522.1| Matrix metalloproteinase 13, preproprotein [Homo sapiens]
gi|49902384|gb|AAH74807.1| Matrix metalloproteinase 13, preproprotein [Homo sapiens]
gi|49904782|gb|AAH74808.1| Matrix metallopeptidase 13 (collagenase 3) [Homo sapiens]
gi|51895762|gb|AAU13907.1| matrix metalloproteinase 13 (collagenase 3) [Homo sapiens]
gi|119587439|gb|EAW67035.1| matrix metallopeptidase 13 (collagenase 3), isoform CRA_b [Homo
sapiens]
gi|313882556|gb|ADR82764.1| matrix metallopeptidase 13 (collagenase 3) (MMP13) [synthetic
construct]
Length = 471
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|7305275|ref|NP_038931.1| matrix metalloproteinase-20 precursor [Mus musculus]
gi|12585270|sp|P57748|MMP20_MOUSE RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|6815255|gb|AAF28470.1|AF155933_1 matrix metalloproteinase-20 [Mus musculus]
gi|6815269|gb|AAF28472.1| matrix metalloproteinase-20 [Mus musculus]
gi|148692992|gb|EDL24939.1| matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|156229730|gb|AAI52336.1| Matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|156229732|gb|AAI52337.1| Matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|182888447|gb|AAI60269.1| Matrix metallopeptidase 20 (enamelysin) [synthetic construct]
Length = 482
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 69/217 (31%), Gaps = 53/217 (24%)
Query: 5 KPVYTTERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW-ALGE 61
KP +A++ L + W + Y+ T ++P + A AL
Sbjct: 96 KPRCGVPDVANYRLFPGEPKWKKNILTYRISKYTPS--------MSPTEVDKAIQMALHA 147
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKA 107
WS V L F S +DI + + +D + +FD A
Sbjct: 148 WSTAVPLNFVRINSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNA 207
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYF 166
+ W G G L A HE GHALGL H + YP Y N Y
Sbjct: 208 EKWTMGTN-GFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYR------------ 254
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
F D+ +Q +YG K G
Sbjct: 255 ----------FHLP----KDDVKGIQALYGPRKIFPG 277
>gi|291571463|dbj|BAI93735.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 260
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N TI+ + +++ G G+D + G N++ F + G+D+ +G G DT +
Sbjct: 62 VNGNQGNDTISGGSNNDTLFGGQGDDFLYGGPGNDLLFGNLGDDLLEGGPGNDTIYGGQG 121
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + N + DFL
Sbjct: 122 NDTIR----GNDGDNLLFGDLGNDFLYG 145
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 54/181 (29%), Gaps = 21/181 (11%)
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ TI +D L D L GG N + + G + +
Sbjct: 63 NGNQGNDTISGGSNNDTLFGGQGDDFLYGGPGNDL---------LFGNLGDDLLEGGPGN 113
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND + GN +N+ F GND G +G +T +Y + + +
Sbjct: 114 DTIYGGQGNDTIRGNDGDNLLFGDLGNDFLYGGAGRNTLMGGEGDDIYFLDPIHRSSQLR 173
Query: 329 DANEHKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D D + + F I + L DL +
Sbjct: 174 DV-----DEIRGFNVVNNPFFGDKIAVPVGTRIDELSLERDRPDLRPSQNDVNGNGLNDI 228
Query: 387 Y 387
Sbjct: 229 I 229
>gi|158257854|dbj|BAF84900.1| unnamed protein product [Homo sapiens]
Length = 471
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|119384532|ref|YP_915588.1| Allergen V5/Tpx-1 family protein [Paracoccus denitrificans PD1222]
gi|119374299|gb|ABL69892.1| Allergen V5/Tpx-1 family protein [Paracoccus denitrificans PD1222]
Length = 421
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 15/202 (7%)
Query: 196 GAPKGSLGNNIYKIEV-QQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSS 252
G + + N+ Y++ S + G G D L+ G I + S
Sbjct: 190 GPAQNTPRNDDYRLTARHDVASGGNGNDWMEGRAGRDTLN--GNAGHDRLI--GGAGFDS 245
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ +++VG++G D + G + N+ + +G D G G D A
Sbjct: 246 LNGGYGNDTLQGGDGNDTLVGAAGRDQLRGGAGNDTLWGGAGYDTLLGGPGADKLDGGAG 305
Query: 313 SYLYKIYRFENAIIVYDANEH-----KQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + + N+ D L+ AD I +I Y
Sbjct: 306 NDWLRGESGNDTLTGRAGNDTLHGGYGNDVLNGG---YGADAFIFRSGHGADTIYGYQQG 362
Query: 368 YEDLIQVIGQDVFESMKHFYEF 389
+ L+ G +
Sbjct: 363 LDRLLIGNGLLDANPAAFIRDH 384
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 15/153 (9%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI 243
++ G N Y + T+ + G D L + TL GG
Sbjct: 232 AGHDRLIGGAGFDSLNGGYG-NDTLQGGDGNDTLVGAAGRDQLRGGAGNDTLWGGAGYDT 290
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L + G N + + +++ G +GND + GNDV +G G
Sbjct: 291 LLGGPGADKLDGGAGNDWLRGESGNDTLTGRAGNDTLH---------GGYGNDVLNGGYG 341
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D F + + IY ++ + D
Sbjct: 342 ADAFIFRSGHGADTIYGYQQGLDRLLIGNGLLD 374
>gi|190895183|ref|YP_001985476.1| putative hemolysin-type calcium-binding protein [Rhizobium etli CIAT
652]
gi|190700844|gb|ACE94926.1| putative hemolysin-type calcium-binding protein [Rhizobium etli CIAT
652]
Length = 1253
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 10/155 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I + S + GG LDL+ +G + + + + I + TI
Sbjct: 898 DTITTFDDPAHASSLVDIRISGGGS--LDLSDELGLRSAVVTADATAGNGITTGVGDDTI 955
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYL 315
+++ G SGND ++G ++ F S G+DV G G D + +
Sbjct: 956 TGGAGNDTLDGGSGNDTLVGAGGSDSLFGSGGSDVLIGGEGNDILYDESGDDILDGGNGD 1015
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ F A+ + D
Sbjct: 1016 DTMSDFGGAVASLSGGAGSDGMWTGANMTGTVDGG 1050
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 9/175 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---GVKNYIDLNTESWSSIGG 255
GS G++ + + + T+ G D ++LT +N I L+ S
Sbjct: 677 SGSSGSDT--VTLTGAEMNGFTTVNLGSGGDTVNLTSTSTGLNGRNDIQLSGLEAISAAA 734
Query: 256 YEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ I + E ++ GS+G D + G N+ SGND G+ G D+ F S
Sbjct: 735 ALAGVVINLSSQSEGFTITGSAGADTITGGGGNDTLDGGSGNDTLVGAGGNDSLFGSGGS 794
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLR-FADQCIDSVNVKQRSILEYTAS 367
+ I N I+ ++ + D + + + F + A+
Sbjct: 795 DVL-IGGEGNDILYDESGDDILDGGNGDDTMSDFGGAVASLSGGAGNDAMWTGAN 848
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 226 GGDDLLD-LTLIGGVKNYIDLNTES-----WSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G D + + +D+ S G + A T + GND
Sbjct: 1089 DGFDTITTFDDPAHASSLVDIRISGGGSLDLSDELGLRSAVVTADATAGNGITTGVGNDT 1148
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP-SYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + N+ SGND G G DTF + A S I F V D
Sbjct: 1149 ITGGAGNDTLDGGSGNDTISGGLGNDTFVFAANLSGNSVIGDFNGGPGVGDLISIANSAF 1208
Query: 339 SDVERLRFADQCIDS 353
+ A + +
Sbjct: 1209 QSFADILAAGEDTGT 1223
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 9/160 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIA-- 263
I F + + G LDL G + I N ++S+ + N + A
Sbjct: 378 SISGNGTAVTFNANQFGASGLSSSLDLRGSTGNQTVIIQNASNFSAAAWTFGGNGSSAWG 437
Query: 264 -QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS----YLYKI 318
I ++ G+SG D + G+S+ ++ SG D G G DTF
Sbjct: 438 NSGNDIIAINGTSGADTITGSSSADIITGGSGVDTLAGGGGDDTFVVNNGDFTGAESIDG 497
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
N + V N L+++ L +
Sbjct: 498 GAGANMLFVAGTNNFTTGTLTNLRTLNGSSGSETVTLTGT 537
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 6/161 (3%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
S TI GG+D LD GG N + S+ G + + +
Sbjct: 750 FTITGSAGADTITGGGGNDTLD----GGSGNDTLVGAGGNDSLFGSGGSDVLIGGEGNDI 805
Query: 271 VVGSSGNDVVIGNSANNVFFESSGND-VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ SG+D++ G + ++ + G G +G D + A + ++
Sbjct: 806 LYDESGDDILDGGNGDDTMSDFGGAVASLSGGAGNDAMWTGANMTGSVDGGSDRDVLFVT 865
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+S+VE + V Q + +++D
Sbjct: 866 GGNLTGLAISNVEIYTTS-AEFVLGTVAQLDGFDTITTFDD 905
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 52/152 (34%), Gaps = 9/152 (5%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG----NDV 297
Y+DL + ++ V+ + ++G D +G + + F +G +D+
Sbjct: 286 YLDLQFGHAAPRPPLTRSGLATYRAVLANFSATAGQDNQVGGAGADTFKIGAGTVQPSDI 345
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDS--- 353
FDG G+DT A + + ++ + + + + + +
Sbjct: 346 FDGRGGIDTLNVTAAADFSVLPASSLLSMEILSISGNGTAVTFNANQFGASGLSSSLDLR 405
Query: 354 -VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
Q I++ +++ G + +
Sbjct: 406 GSTGNQTVIIQNASNFSAAAWTFGGNGSSAWG 437
>gi|209528104|ref|ZP_03276580.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491463|gb|EDZ91842.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 260
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N TI+ + +++ G G+D + G N++ F + G+D+ +G G DT +
Sbjct: 62 VNGNQGNDTISGGSNNDTLFGGQGDDFLYGGPGNDLLFGNLGDDLLEGGPGNDTIYGGQG 121
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + N + DFL
Sbjct: 122 NDTIR----GNDGDNLLFGDLGNDFLYG 145
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 53/181 (29%), Gaps = 21/181 (11%)
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ TI +D L D L GG N + + G + +
Sbjct: 63 NGNQGNDTISGGSNNDTLFGGQGDDFLYGGPGNDL---------LFGNLGDDLLEGGPGN 113
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND + GN +N+ F GND G +G +T Y + + +
Sbjct: 114 DTIYGGQGNDTIRGNDGDNLLFGDLGNDFLYGGAGRNTLIGGEGDDTYFLDPIHRSSQLR 173
Query: 329 DANEHKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D D + + F I + L DL +
Sbjct: 174 DV-----DEIRGFNVVNNPFFGDKIAVPVGTRIDELSLERDRPDLRPSQNDVNGNGLNDI 228
Query: 387 Y 387
Sbjct: 229 I 229
>gi|121609533|ref|YP_997340.1| hemolysin-type calcium-binding region [Verminephrobacter eiseniae
EF01-2]
gi|121554173|gb|ABM58322.1| Hemolysin-type calcium-binding region [Verminephrobacter eiseniae
EF01-2]
Length = 1383
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + + + G G D + G + ++ +G+DV +G +G D +
Sbjct: 1201 DLSGNAGDDLLKGGEGNDHLRGGQGRDQLHGEAGDDRLEGGAGDDVLEGGAGTDHLDGGS 1260
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
Y+ R A + D
Sbjct: 1261 GDDRYQFGRGAGADTITDTAGSAD 1284
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D + G + ++GND DG +G DT + Y++ I
Sbjct: 705 DHLYGGAGDDRLSGFDGADHLEGNAGNDTLDGGAGSDTLVGGTGNDTYRLQTGTVGIDTL 764
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 61/184 (33%), Gaps = 14/184 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG-- 282
S GD L V + N + ++ G + N +A T +++ G +G+DV+ G
Sbjct: 1082 SNGDYTLTAAARLIVSQRLASNGGAD-NMNGGQGNDWMAGQTGNDTMRGGAGDDVMYGDD 1140
Query: 283 NSANNVF-FESSGNDVFDGSSGLDTFFYYAPSYLYKIY------RFENAIIVYDANEHKQ 335
N+A +G D+ G G D + A E +
Sbjct: 1141 NAATTAMAEADAGQDLMYGDDGDDQMYGGAKDDDMDGGAGDDQLSGEAGSDILHGGSGND 1200
Query: 336 DFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGL 391
D + + L+ + + R L A + L G DV E + G
Sbjct: 1201 DLSGNAGDDLLKGGEGNDHLRGGQGRDQLHGEAGDDRLEGGAGDDVLEGGAGTDHLDGGS 1260
Query: 392 SEGR 395
+ R
Sbjct: 1261 GDDR 1264
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 15/152 (9%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA--------NNVFFESSGNDVFDGSSGLD 305
GG ++ A + V+G +G D + + N++ F +DV G +G D
Sbjct: 901 GGLSNYVSTAGGD--DRVIGGAGRDFIRTGATGTSPTATDNDIAFGGDESDVLMGGAGDD 958
Query: 306 TFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVER--LRFADQCIDSVNVKQ-RS 360
+ + ++ D + E D L R + F D+++
Sbjct: 959 QVWGGRDNEAENATTAADSDSRGDWVSGEAGADSLHGSRRSDVLFGGAGADTIDGGAGAD 1018
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
++ A Y L IG + + F +
Sbjct: 1019 LILGDAQYTPLSHAIGLPSSTTTQSFVWSSSA 1050
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 6/152 (3%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+W+ G A+ V + + + G D + G N+ +GND G +G D +
Sbjct: 1078 TWARSNGDYTLTAAARLIVSQRLASNGGADNMNGGQGNDWMAGQTGNDTMRGGAGDDVMY 1137
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--NVKQRSILEYTA 366
+ + + + ++ + D IL +
Sbjct: 1138 GDDNAATTAMAEADAGQDLMYGDDGDDQMYGGAKDDDMDGGAGDDQLSGEAGSDILHGGS 1197
Query: 367 SYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
+DL G D G GRD
Sbjct: 1198 GNDDLSGNAGDDLLKGGEGNDHLRGGQ--GRD 1227
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 10/82 (12%)
Query: 271 VVGSSGNDVVIG--NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--------IYR 320
V G+ +DV+ G NS + + +G+D G G D A + +
Sbjct: 687 VFGNDADDVMQGTSNSLGDHLYGGAGDDRLSGFDGADHLEGNAGNDTLDGGAGSDTLVGG 746
Query: 321 FENAIIVYDANEHKQDFLSDVE 342
N D L D +
Sbjct: 747 TGNDTYRLQTGTVGIDTLVDTQ 768
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 30/138 (21%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID------LNTESWSSIGGYEKNMT 261
+ + D+GG ++ GG I + T + + N
Sbjct: 882 GSRSNSFEGSAYADVIDTGGGLSNYVSTAGGDDRVIGGAGRDFIRTGATGTSPTATDNDI 941
Query: 262 IAQHTVIESVVGSSGNDVVIGN------------------------SANNVFFESSGNDV 297
+ ++G +G+D V G + + S +DV
Sbjct: 942 AFGGDESDVLMGGAGDDQVWGGRDNEAENATTAADSDSRGDWVSGEAGADSLHGSRRSDV 1001
Query: 298 FDGSSGLDTFFYYAPSYL 315
G +G DT A + L
Sbjct: 1002 LFGGAGADTIDGGAGADL 1019
>gi|33595034|ref|NP_882677.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
parapertussis 12822]
gi|33565110|emb|CAE40062.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
parapertussis]
Length = 1740
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G+D +D + G L+ +
Sbjct: 1488 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRG-----LDAGAKGV 1534
Query: 250 WSSIGGYEKNMTIAQHT-----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS +DV+IG++ NV +GNDV G +G
Sbjct: 1535 FLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGD 1594
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + +N
Sbjct: 1595 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAG 1650
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1651 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1680
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 1044 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 1103
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 1104 DLGVWSNQLDGGAGVDTVKY 1123
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 32/166 (19%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-- 304
+++ G + T+ + + G GND++ G++ N+ + G+D +G +G
Sbjct: 1306 DAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDW 1365
Query: 305 ---------DTFFYYAPSYLYKIYRFENAIIVYD---------------------ANEHK 334
D A + V A
Sbjct: 1366 FGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSA 1425
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D +S +E + + Q ++L + L G DV
Sbjct: 1426 YDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVL 1471
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 20/152 (13%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D + + + DL+
Sbjct: 1213 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEG 1272
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D G G D F
Sbjct: 1273 -WVRKAARRGMGYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLF 1331
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + +A D L
Sbjct: 1332 GGDGNDML----YGDAGNDTLYGGLGDDTLEG 1359
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1169 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1228
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD V R + Y S
Sbjct: 1229 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYYDSV 1288
Query: 369 EDLIQVIGQDVFESM 383
+ VIG + + +
Sbjct: 1289 RSVENVIGTSMKDVL 1303
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 1338 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 1391
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 1392 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 1449
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 1450 ANVLRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 1508
Query: 328 YDANEHKQDF 337
D +
Sbjct: 1509 LDGGDGNDTV 1518
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 14/144 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 1097 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 1156
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 1157 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLG--LD 1213
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
+Y + I +E D +
Sbjct: 1214 TLYGEDGNDIFLQDDETVSDDIDG 1237
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 1055 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 1114
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 1115 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 1174
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 1175 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 1206
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 1049 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 1108
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 1109 SNQLDGGAGVDTV 1121
>gi|301630426|ref|XP_002944322.1| PREDICTED: matrix metalloproteinase-18-like, partial [Xenopus
(Silurana) tropicalis]
Length = 237
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 63/192 (32%), Gaps = 49/192 (25%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
+ W + Y+ T D+ A WS VV LTF SD
Sbjct: 65 NAVWKKKDLTYRILNYTPDMTRNDV-------DRAIEKAFKVWSDVVPLTFTRIYDRVSD 117
Query: 79 IKFISSNNGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTILSHNAL 125
I+ + + + + +D + +++FD+ + W G GT L A
Sbjct: 118 IEMLFAYRDHKDSLPFDGPSGILAHAFAPGDNIGGDVHFDEDEKWTSGSA-GTNLFLVAA 176
Query: 126 HEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE+GH+LGL H N YP Y Y P +
Sbjct: 177 HELGHSLGLDHSNDPNALMYPTYH----------------YINPNTFQLPQ--------- 211
Query: 185 VSDIVAVQKIYG 196
DI + +YG
Sbjct: 212 -DDINGIHSLYG 222
>gi|60819972|gb|AAX36519.1| matrix metalloproteinase 13 [synthetic construct]
Length = 471
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|332208038|ref|XP_003253103.1| PREDICTED: collagenase 3 [Nomascus leucogenys]
Length = 471
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 64/187 (34%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|291568562|dbj|BAI90834.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 271
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 8/148 (5%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSS 252
+ + ++ TIY GDD +D GG N I E +
Sbjct: 63 TNDDDELFGTNGNDVILGRGGNDTIYGFMGDDFIDGQGGDDRIYGGQGNDILSGAEGRDT 122
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + + G+ GND + G+ N+ + G+D G SG D F
Sbjct: 123 IFGDIGDDIIYGGADDDLLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQG 182
Query: 313 SYL-YKIYRFENAIIVYDANEHKQDFLS 339
+ I R + + ++D +
Sbjct: 183 NDTLVGISRAGRGYTLIGDFDPEKDTVM 210
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 44/129 (34%), Gaps = 16/129 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---- 308
+ G N I +++ G G+D + G ++ + GND+ G+ G DT F
Sbjct: 69 LFGTNGNDVILGRGGNDTIYGFMGDDFIDGQGGDDRIYGGQGNDILSGAEGRDTIFGDIG 128
Query: 309 ----YYAPSYLYKIYRFENAIIVYDANEH------KQDFLSD--VERLRFADQCIDSVNV 356
Y N I D D+L L F DQ D++
Sbjct: 129 DDIIYGGADDDLLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQGNDTLVG 188
Query: 357 KQRSILEYT 365
R+ YT
Sbjct: 189 ISRAGRGYT 197
>gi|156399875|ref|XP_001638726.1| predicted protein [Nematostella vectensis]
gi|156225849|gb|EDO46663.1| predicted protein [Nematostella vectensis]
Length = 210
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 69/211 (32%), Gaps = 47/211 (22%)
Query: 5 KPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
KP + D LR + ++ K + D++ ++ R AL W+
Sbjct: 26 KPRCGMPDVDDSGLRVRRYNARDPWSKKSLTYYIEYGADLSA--SEQDDIFRLALKFWAD 83
Query: 65 VVDLTFEETSIH--SDIKFISSNNGYVCTPRYDS--------------RYFME---INFD 105
L+F + +DIK + ++ T YF +FD
Sbjct: 84 ESGLSFRQVKSGTAADIKISFGSGAHMGTHVESQCPFDFDGPGKVLAHAYFPSDGRAHFD 143
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
+ + + +G G L A HE GH+LGL H G +Y Y+ D L
Sbjct: 144 EDETFTHGTSSGINLMWVAAHEFGHSLGLGHSNVQ--GALMYPYYTGYKPDMKLH----- 196
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
DI +Q +YG
Sbjct: 197 -------------------ADDIAGIQHLYG 208
>gi|329849048|ref|ZP_08264076.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844111|gb|EGF93680.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 2662
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 15/169 (8%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++S +G +N+T+ + + G+ ++++ GN+ NN+ GND G G DT+
Sbjct: 1326 AYSLVGRQVENLTLTGSDNV-NATGNDSDNILTGNAGNNLLDGGLGNDTMIGGLGDDTYV 1384
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR--------- 359
A + L E + V + S++E L +
Sbjct: 1385 VNATTDLVTEAVGEGSDTVQSSATF--TLSSNIETLTLTGAGNINGVGNAGNNLITGNSG 1442
Query: 360 -SILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYL 405
++L+ A + L +G D + ++ SEG D + S YL
Sbjct: 1443 NNLLDGGAGNDSLTGGLGDDSYIVDAAGDAVTENNSEGTDTVYASVTYL 1491
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 92/283 (32%), Gaps = 36/283 (12%)
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
++ Y + SV Y ++++ Y + +D+ + A GN +
Sbjct: 1542 NDTYVVATVNDSVTEYASEGTDTVESTITYT---LGADVENLILTGSANINGTGNT---L 1595
Query: 210 EVQQKDSPFIQTIYDSGGDDLL----------------DLTLIGGVKNYIDLNTESWSSI 253
+ + G+D + ++ + G + ++T ++S
Sbjct: 1596 NNTLTGNAGNNVLDGGAGNDTMTGGAGNDTYYVQAGADNVVELSGEGTDLVISTVTYSLS 1655
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G +N+T+ I + G+ +V+ GN+ NN+ +GND G G DTF A
Sbjct: 1656 GRQAENLTLTGAAAI-NATGNGVGNVLTGNTGNNLLDGGTGNDTMVGGLGDDTFVVSATG 1714
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ V A +VE L ++ ++L S L
Sbjct: 1715 DVVTEATSAGTDTVQTAVTL--TLAVNVENLVLLSTALNGTGNGLGNVLTGNVSNNLLDG 1772
Query: 374 VIGQDV-----------FESMKHFYEFGLSEGRDITFDSYLYL 405
G D ++ SEG D S Y+
Sbjct: 1773 GAGDDSLSGGLGDDSYVVDAAGDVVTEAASEGTDTVSSSVAYV 1815
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 7/186 (3%)
Query: 202 LGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
LGNN+ + + + ++ G+D + ++ D + +
Sbjct: 1514 LGNNLIGNTGNNRLDGAAGVNALFGGLGNDTYVVATVNDSVTEYASEGTDTVESTITYTL 1573
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I + + G++ N+ + GN+ NNV +GND G +G DT++ A +
Sbjct: 1574 GADVENLILTGSANINGTGNTLNNTLTGNAGNNVLDGGAGNDTMTGGAGNDTYYVQAGAD 1633
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
E +V + I++ ++L L
Sbjct: 1634 NVVELSGEGTDLVISTVTYSLSGRQAENLTLTGAAAINATGNGVGNVLTGNTGNNLLDGG 1693
Query: 375 IGQDVF 380
G D
Sbjct: 1694 TGNDTM 1699
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 15/168 (8%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++S G +N+T+ + G+ + + GN N SG+D +G G D+
Sbjct: 2372 TYSLAGKQVENLTL-TGVASLNATGNGLANGLTGNDGANTLDGGSGHDRLNGGLGADSLI 2430
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLRFADQCIDSVNVK-Q 358
+ Y I + I+ +A D + ++ E L +
Sbjct: 2431 GGTGNDTYVIESAGD--IITEAAGAGTDTVESSITYILATNTENLTLTGTAALNGTGNEF 2488
Query: 359 RSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
+IL + L +G D ++ +G D+ F + Y
Sbjct: 2489 SNILTGNSGNNILTGGLGNDTYYVQNTGDNVAELGGQGTDVIFSTVTY 2536
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 14/188 (7%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L+ ++I D + S G + + + +G++ +V+ GN+ NN+
Sbjct: 1873 TLNDSVIEAPAQGTDTVESTISYTLGADVENLVLTGAANINGIGNTLGNVLTGNTGNNLL 1932
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D G G DTF + + E +V A ++VE L
Sbjct: 1933 DGGAGDDTAIGGLGDDTFVVGSVGDVVTEAAAEGTDLVQSAVTWTLG--ANVENLTLTGS 1990
Query: 350 CIDSVNVKQR----------SILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDI 397
S ++L+ A + L +G D + + + EG D
Sbjct: 1991 ANASGTGNGSNNVIIANSGNNMLDGLAGNDSLSGGLGDDSYMVDVEGDVVTEAVGEGTDQ 2050
Query: 398 TFDSYLYL 405
+ Y+
Sbjct: 2051 VVAALSYV 2058
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 70/223 (31%), Gaps = 24/223 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL--LDLTLIGGVKNYIDLNTESWSSI--- 253
G+ GNN+ G+D + V+ D +S++
Sbjct: 2158 TGTAGNNVLTGNSGNNVLSGGL------GNDTYFIQNAGDNVVEANGDGTDTIYSTVTYA 2211
Query: 254 --GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G Y +++ + I + G+S + + GN N +G+D DG G+DT A
Sbjct: 2212 LSGRYIESLVLTGAAAI-NATGNSLANSLTGNDGANSLTGLAGHDDLDGGLGVDTLIGGA 2270
Query: 312 PSYLYKIYRFE-------NAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILE 363
Y + N + ++VE L ++ ++L
Sbjct: 2271 GDDSYGVDNAGDVVTELVNEGTDTVRSSISYTLATNVENLILLGASNVNGTGNDLNNVLT 2330
Query: 364 YTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
A L +G D ++ G D F S Y
Sbjct: 2331 GNAGTNLLTGGLGDDSYYIQNAADNVSEAAGAGIDTIFSSVTY 2373
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 54/193 (27%), Gaps = 11/193 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTE-----S 249
G+ + G+ I I D D G GDD +D Y+ + +
Sbjct: 1035 GSNDVTTGSEIDYINGGTGDEQL-----DGGLGDDFIDGGAGTNTVAYLSATSGVTVSLA 1089
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ ++++ GSS ND + G+ NN+ SG D G G DT++
Sbjct: 1090 TPGTAQDTGGAGVDTLYNLQNLTGSSYNDSLTGSDGNNLLDGRSGADSLAGGLGDDTYYV 1149
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ V ++ +IL +
Sbjct: 1150 ENAGDVVNEATSAGTDTVLSTVTFTLAGKQVEHLTLTGSASVNGTGNGFNNILNGNSGNN 1209
Query: 370 DLIQVIGQDVFES 382
L D
Sbjct: 1210 RLDGGANNDTMSG 1222
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 71/226 (31%), Gaps = 29/226 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-----LNTESWSSIG 254
+ N + D G D +G +D + +
Sbjct: 1747 STALNGTGNGLGNVLTGNVSNNLLDGGAGDDSLSGGLGDDSYVVDAAGDVVTEAASEGTD 1806
Query: 255 GYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
++ +E+++ S N GN+ NN ++GN+ DG +G+++
Sbjct: 1807 TVSSSVAYVLGASVENLILTGSANINGTGNALNNSLTGNAGNNRLDGGAGVNSLAGGLGD 1866
Query: 314 YLYKIYRFENAIIVYDANEHKQDFL---------SDVERLRFADQ----------CIDSV 354
Y + +++I +A D + +DVE L
Sbjct: 1867 DTYVVATLNDSVI--EAPAQGTDTVESTISYTLGADVENLVLTGAANINGIGNTLGNVLT 1924
Query: 355 NVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDIT 398
++L+ A + I +G D V S+ +EG D+
Sbjct: 1925 GNTGNNLLDGGAGDDTAIGGLGDDTFVVGSVGDVVTEAAAEGTDLV 1970
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 8/123 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + G+D ++ +GG + +T ++S G Y + +
Sbjct: 2488 FSNILTGNSGNNILTGGLGNDTYYVQNTGDNVAELGGQGTDVIFSTVTYSLSGRYAETIN 2547
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ I + G+S + +IGN N G DV G G D F + + S I F
Sbjct: 2548 LTGSADI-NATGNSLANTLIGNDGINTLNGKGGVDVLTGGLGADIFLFESASGKDSITDF 2606
Query: 322 ENA 324
A
Sbjct: 2607 SAA 2609
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 23/153 (15%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
S N GN+ N ++GN+ DG++G++ F + Y + +++ Y
Sbjct: 1502 TGSANINGTGNALGNNLIGNTGNNRLDGAAGVNALFGGLGNDTYVVATVNDSVTEY--AS 1559
Query: 333 HKQDFL---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + +DVE L I+ + L A L G D
Sbjct: 1560 EGTDTVESTITYTLGADVENLILTGSANINGTGNTLNNTLTGNAGNNVLDGGAGNDTMTG 1619
Query: 383 MK----HFYEFGL-------SEGRDITFDSYLY 404
++ + G EG D+ + Y
Sbjct: 1620 GAGNDTYYVQAGADNVVELSGEGTDLVISTVTY 1652
>gi|301773286|ref|XP_002922068.1| PREDICTED: matrix metalloproteinase-27-like [Ailuropoda
melanoleuca]
Length = 513
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 64/189 (33%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + L WS+V LTF +TS +DI
Sbjct: 106 WGRYNLTYRIVNYTPDMTRADV-------DEAIQNGLEVWSRVTPLTFAKTSKGIADIMI 158
Query: 82 ISSNNGYVCTPRYDSRYFM--------------EINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D + + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPNKYPLSQ---DD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 ISGIQSIYG 261
>gi|260574702|ref|ZP_05842705.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259023119|gb|EEW26412.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 1542
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 5/154 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+++Y Q I Y G D D T+ G + S+ G + N ++
Sbjct: 569 DDDVYGGNDQDVIHTGIGNDYAQG--DTGDDTVYGDAGDDFLRGDAGSDSVYGGDGNDSV 626
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ V G GND + G ++ + +GND GS D + +
Sbjct: 627 YGGLGTDQVFGGDGNDYIYGGYGDDTVYGGAGNDTITGSGENDLVYG---DDGDDFMQGS 683
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
N L + + F D V+
Sbjct: 684 NGADTLIGGLGADTMLGEEDADSFYGGAGDYVDG 717
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 5/150 (3%)
Query: 221 TIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ + G+DL+D +G ID N S +G + + ++V+ G+D
Sbjct: 779 TVSGTAGNDLIDTAYLGDPDGDRIDNNDASL--VGHAPNDDLVVAGDGFDTVMAGLGDDT 836
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
V G + +V + G+D G D F A + +++ + D D +
Sbjct: 837 VYGGAGQDVLYGGEGDDSLLGGDNADLLFTDAGNDSLLGEGGDDSFQITDG--FGTDVVV 894
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYE 369
E ++ ++ +L+ +A
Sbjct: 895 GGETGETFGDVLNVSSMTGDVVLDLSAGNP 924
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 76/250 (30%), Gaps = 34/250 (13%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKI-EVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKN-YI 243
DI A Y G LGN V +P I D GDD++D +G I
Sbjct: 311 DIGANSFTYTVEDG-LGNTDIGFITVNTTTAPAADGIVDGTSGDDMIDTAYLGDPDGDRI 369
Query: 244 DLNTESWSS-------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
D + + + N T+ + V G +G D + G + F S+G D
Sbjct: 370 DAGDALLAGQVGEDDIVVAGDGNDTVVAGLGDDVVYGGAGQDSLYGEDGADTLFGSTGAD 429
Query: 297 VFDGSSGLDTFFYY------------------APSYLYKIYRFENAIIVYDANEHKQDFL 338
+ +G G D + + I +D + +
Sbjct: 430 MLEGGLGADVLVGGDDADLIRGASGDVVDGGEGGTDQDTLTASGVLTIAFDPGNPENGTI 489
Query: 339 SDVER--LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM---KHFYEFGLSE 393
+ ++ L F++ +N + Y + DLI DV + G
Sbjct: 490 TFIDNSTLTFSNIEHLILNGGNPDGIVYGTAAADLIGAGYVDVNGDVIDNGDAIFAGAGP 549
Query: 394 GRDITFDSYL 403
D F
Sbjct: 550 DDDEVFAGDG 559
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 53/161 (32%), Gaps = 9/161 (5%)
Query: 227 GDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
G D +D + +Y+ L +I N ++ + + G +G D ++
Sbjct: 1111 GGDRIDASDALLPGAAPEDDYV-LAGAGDDTIESGLGNDSVLGGDGADGIFGGAGADTLL 1169
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + + G D DG + D + + + + + + +
Sbjct: 1170 GEAGADYIEGGDGADTLDGGADNDELYGGLGDD---LVQGGSGADWLEGDLGIYSSIGGN 1226
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L+ D + + +L A + L+ G D +
Sbjct: 1227 DTLQGGDGSDTILGNRGNDLLTGDAGDDSLLGEAGADTLDG 1267
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 10/171 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVV 280
++ G+D + + G Y + I N T ++V G +G+D +
Sbjct: 554 VFAGDGNDTV-FSGAGDDDVY----GGNDQDVIHTGIGNDYAQGDTGDDTVYGDAGDDFL 608
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G++ ++ + GND G G D F + IY VY + S
Sbjct: 609 RGDAGSDSVYGGDGNDSVYGGLGTDQVFGGDGND--YIYGGYGDDTVYGGAGNDTITGSG 666
Query: 341 VERLRFADQC--IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
L + D + +++ + L + + + +
Sbjct: 667 ENDLVYGDDGDDFMQGSNGADTLIGGLGADTMLGEEDADSFYGGAGDYVDG 717
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+SSIGG N T+ ++++G+ GND++ G++ ++ +G D DG G DT
Sbjct: 1218 GIYSSIGG---NDTLQGGDGSDTILGNRGNDLLTGDAGDDSLLGEAGADTLDGGLGADTL 1274
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ + + +++
Sbjct: 1275 LGGDDRDTFLVGAGDVVDGGNGGDDYDT 1302
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 3/159 (1%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+Y + DL+ + + ID ++ G + + ++V +G+D V
Sbjct: 516 VYGTAAADLIGAGYVDVNGDVIDNGDAIFAGAGP--DDDEVFAGDGNDTVFSGAGDDDVY 573
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + +V GND G +G DT + A + +++ D N+ L
Sbjct: 574 GGNDQDVIHTGIGNDYAQGDTGDDTVYGDAGDDFLRGDAGSDSVYGGDGNDSVYGGL-GT 632
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+++ D + A + + D+
Sbjct: 633 DQVFGGDGNDYIYGGYGDDTVYGGAGNDTITGSGENDLV 671
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 12/146 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + ++ G D + GG L I G + T+ +
Sbjct: 1138 DDTIESGLGNDSVLGGDGADGI----FGGAGADTLLGEAGADYIEGGDGADTLDGGADND 1193
Query: 270 SVVGSSGNDVVIGNSANNVFFE-------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G+D+V G S + GND G G DT + L
Sbjct: 1194 ELYGGLGDDLVQGGSGADWLEGDLGIYSSIGGNDTLQGGDGSDTILGNRGNDLLT-GDAG 1252
Query: 323 NAIIVYDANEHKQDFLSDVERLRFAD 348
+ ++ +A D + L D
Sbjct: 1253 DDSLLGEAGADTLDGGLGADTLLGGD 1278
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSI--GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D+L+++ + G +DL+ + +S G + IE++V GNDVVIG+S +
Sbjct: 904 DVLNVSSMTG-DVVLDLSAGNPASDEDGTLTSGTDSLSFSQIEAIVLGGGNDVVIGSSGD 962
Query: 287 NVFFESSGNDVFDGSSGLDTF--FYYAPSYLYKIYRFENAIIVYD---ANEHKQDFLSDV 341
+ G D DG +G DTF + + + + A + ++ S V
Sbjct: 963 DFVAVGWGADSIDGGAGNDTFEMEFDGDADVINFADGDGADTLLGFDAPIDNGDGTYSGV 1022
Query: 342 ERLRFADQCIDSVN 355
+ L + N
Sbjct: 1023 DTLDVSGMTDALGN 1036
>gi|209524652|ref|ZP_03273199.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209494796|gb|EDZ95104.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 271
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 8/148 (5%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSS 252
+ + ++ TIY GDD +D GG N I E +
Sbjct: 63 TNNDDELFGTNGNDVILGRGGNDTIYGFMGDDFIDGQGGDDLIYGGQGNDILSGAEGRDT 122
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + + G+ GND + G+ N+ + G+D G SG D F
Sbjct: 123 IFGDIGDDIIYGGADDDLLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQG 182
Query: 313 SYL-YKIYRFENAIIVYDANEHKQDFLS 339
+ I R + + ++D +
Sbjct: 183 NDTLVGISRAGRGYTLIGDFDPEKDTVM 210
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 45/129 (34%), Gaps = 16/129 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---- 308
+ G N I +++ G G+D + G +++ + GND+ G+ G DT F
Sbjct: 69 LFGTNGNDVILGRGGNDTIYGFMGDDFIDGQGGDDLIYGGQGNDILSGAEGRDTIFGDIG 128
Query: 309 ----YYAPSYLYKIYRFENAIIVYDANEH------KQDFLSD--VERLRFADQCIDSVNV 356
Y N I D D+L L F DQ D++
Sbjct: 129 DDIIYGGADDDLLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQGNDTLVG 188
Query: 357 KQRSILEYT 365
R+ YT
Sbjct: 189 ISRAGRGYT 197
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 8/154 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D +D TL GG N + L + + T + + G++GNDV++G N+
Sbjct: 27 TDEID-TLFGGPGNNVFLLQNHFDQLPPLSPATTQIGTNNDDELFGTNGNDVILGRGGND 85
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLR 345
+ G+D DG G D Y I D D + + L
Sbjct: 86 TIYGFMGDDFIDGQGGDD-LIYGGQGNDILSGAEGRDTIFGDI---GDDIIYGGADDDLL 141
Query: 346 FADQCIDSVNVKQRSILEYTASYED-LIQVIGQD 378
F +Q D++ + Y +D L+ G D
Sbjct: 142 FGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGND 175
>gi|332208032|ref|XP_003253100.1| PREDICTED: matrix metalloproteinase-27 [Nomascus leucogenys]
Length = 513
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 60/189 (31%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T E + L WSKV L F + S +DI
Sbjct: 106 WRKYNLTYRIINYTPDMAR-------AAVDEAIQEGLEVWSKVTPLKFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D Y + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPRK-YPLS--QDD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 INGIQSIYG 261
>gi|300869290|ref|ZP_07113881.1| hypothetical protein OSCI_4020005 [Oscillatoria sp. PCC 6506]
gi|300332667|emb|CBN59079.1| hypothetical protein OSCI_4020005 [Oscillatoria sp. PCC 6506]
Length = 991
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 58/175 (33%), Gaps = 19/175 (10%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNT 247
+ Y + S T++ G+D L + TL G N L
Sbjct: 214 DTTYGDQGNDIVFGSEGNDTLFGGKGNDCLRGGGEDDLVSGDRGNDTLFGDTGNDTVLGG 273
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G E I ++ G G+D++ G N+ SG+DV G G DTF
Sbjct: 274 GGSDLLLGQEGGDRINGGAGNDTASGGEGDDIIYGGEGNDELAGDSGDDVLSGDRGSDTF 333
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDF--LSDVERLR-FADQCIDSVNVKQR 359
+ I RF + L+D + +R F D ++ R
Sbjct: 334 TGGEGRDTFVIGRFSTQPASLSSGSATTGGVNLTDADLIRDFTDDDAIALTGDLR 388
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 47/145 (32%), Gaps = 9/145 (6%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
I+++ +LG + T S G T V + L
Sbjct: 744 IISLSTTKAGSTVNLGGTGVQFTPAGAAGTVAFTYTISDGFGTSPGTAAATVNVQVFLAD 803
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
TI + ++ G +G+D + G AN+ NDV G +G+D+
Sbjct: 804 ---------SGANTIVGGSFPDNFNGLAGSDTIDGAGANDTINGGLDNDVLIGGAGVDSM 854
Query: 308 FYYAPSYLYKIYRFENAIIVYDANE 332
+ ++ + V++A
Sbjct: 855 SGGGGNNTFRYTSPTDGGAVFEAAS 879
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 26/201 (12%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG--GDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
+ ++ + Y +G G D + D ++ GG + + + + G
Sbjct: 159 DDTVFGGDGPDLLRGEENNDYLNGNAGRDTVEGGAGDDSVRGGKDDDLVSGDQGSDTTYG 218
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N + +++ G GND + G +++ GND G +G DT S L
Sbjct: 219 DQGNDIVFGSEGNDTLFGGKGNDCLRGGGEDDLVSGDRGNDTLFGDTGNDTVLGGGGSDL 278
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ I D S E I+ ++L
Sbjct: 279 LLGQEGGDRI----NGGAGNDTASGGE---------------GDDIIYGGEGNDELAGDS 319
Query: 376 GQDVFESMKHFYEFGLSEGRD 396
G DV + F EGRD
Sbjct: 320 GDDVLSGDRGSDTFTGGEGRD 340
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 1/142 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G +N TI+ ++V G G D++ G N+ ++G D +G +G D+
Sbjct: 146 GGPRNDTISARPGDDTVFGGDGPDLLRGEENNDYLNGNAGRDTVEGGAGDDSVRGGKDDD 205
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
L + D + L + ++ + L
Sbjct: 206 LVS-GDQGSDTTYGDQGNDIVFGSEGNDTLFGGKGNDCLRGGGEDDLVSGDRGNDTLFGD 264
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
G D EG D
Sbjct: 265 TGNDTVLGGGGSDLLLGQEGGD 286
Score = 44.3 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 7/111 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G++ +D +IG N+ G+D G G D + Y NA
Sbjct: 135 VQGTNLDDYLIGGPRNDTISARPGDDTVFGGDGPDLLRGEENND----YLNGNAGRDTVE 190
Query: 331 NEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQD 378
D + + L DQ D+ Q + + + + + L G D
Sbjct: 191 GGAGDDSVRGGKDDDLVSGDQGSDTTYGDQGNDIVFGSEGNDTLFGGKGND 241
>gi|291567822|dbj|BAI90094.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1503
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 8/149 (5%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
+ +Y ++ + ++ + G+D L D TL GG N + + G
Sbjct: 75 DDTVYGLDGDDIIGGNEGNDFLHGNQGNDTLYGGQGDDTLRGGKGNDVLFGDRGDDLLFG 134
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T+ + +++ G GND++ G +++ F GND G G DT +
Sbjct: 135 DRDHDTLFGNQGNDTLYGGQGNDLLYGGKGDDLLFGDRGNDTLIGDEGSDTLTGGEGNNW 194
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ I N DF + + +
Sbjct: 195 FYIGLNTGGFTPARTN-FIMDFDINKDSI 222
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 7/140 (5%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G + + I + + + G+ GND + G ++ GNDV G G D
Sbjct: 73 GGDDTVYGLDGDDIIGGNEGNDFLHGNQGNDTLYGGQGDDTLRGGKGNDVLFGDRGDDLL 132
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDS-VNVKQRSILEY 364
F F N D L + L F D+ D+ + + L
Sbjct: 133 FGDRDHDTL----FGNQGNDTLYGGQGNDLLYGGKGDDLLFGDRGNDTLIGDEGSDTLTG 188
Query: 365 TASYEDLIQVIGQDVFESMK 384
+ F +
Sbjct: 189 GEGNNWFYIGLNTGGFTPAR 208
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+D V G +++ + GND G+ G DT + +
Sbjct: 67 DIIFALGGDDTVYGLDGDDIIGGNEGNDFLHGNQGNDTLYGGQGDDTLR----GGKGNDV 122
Query: 329 DANEHKQDFLSDVERL--RFADQCIDSVNVKQRSILEYTASYEDL 371
+ D L F +Q D++ Q + L Y +DL
Sbjct: 123 LFGDRGDDLLFGDRDHDTLFGNQGNDTLYGGQGNDLLYGGKGDDL 167
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G+ +D++ ++ + G+D+ G+ G D + +
Sbjct: 58 DFILGTEFDDIIFALGGDDTVYGLDGDDIIGGNEGNDFLHGNQGNDTL----YGGQGDDT 113
Query: 329 DANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D L + L F D+ D++ Q + Y DL
Sbjct: 114 LRGGKGNDVLFGDRGDDLLFGDRDHDTLFGNQGNDTLYGGQGNDL 158
>gi|318606491|emb|CBY27989.1| putative calcium binding hemolysin [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 497
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 14/155 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+Y GDD++ + + G + I G N I + G GND +
Sbjct: 289 LYAKHGDDVI--SDLSGRGHKI----------YGDVGNDIIYAKGGNNMLSGGDGNDELF 336
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + N++ + G+D+ + G++ F Y I++D +
Sbjct: 337 GGNGNDLLYGGQGDDILNSGDGINVFAGEEGDDSYVFEPGHGDNIIFDNKGRNSIIFKGI 396
Query: 342 ER--LRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ L+F Q + S T + ++
Sbjct: 397 DYRVLQFKKQDSNLTININNSNKAVTIANYFVVGA 431
>gi|293604651|ref|ZP_06687053.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553]
gi|292816982|gb|EFF76061.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553]
Length = 3744
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D + GG + I I G + + + + G +GND++ G +
Sbjct: 3556 GGNDTI----HGGTGDDI---------IYGQGGDDALYGDDGNDILYGGAGNDLLHGGAG 3602
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+ SGND G G DT + A S +K + + A + +DF
Sbjct: 3603 NDTLDGGSGNDTLIGGKGDDTLYGGAGSDTFKWELNDQGSVGAPAVDTIKDF 3654
>gi|109108476|ref|XP_001098996.1| PREDICTED: collagenase 3 isoform 4 [Macaca mulatta]
Length = 471
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 64/187 (34%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|33599313|ref|NP_886873.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
bronchiseptica RB50]
gi|33575359|emb|CAE30822.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
bronchiseptica RB50]
Length = 1740
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G+D +D + G L+ +
Sbjct: 1488 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRG-----LDAGAKGV 1534
Query: 250 WSSIGGYEKNMTIAQHT-----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS +DV+IG++ NV +GNDV G +G
Sbjct: 1535 FLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGD 1594
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + +N
Sbjct: 1595 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAG 1650
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1651 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1680
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 1044 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 1103
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 1104 DLGVWSNQLDGGAGVDTVKY 1123
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S G D D V++ ++ S IG + N + Q
Sbjct: 1261 YGFGIEADLSEGWVRKAARRGMDYYD-----SVRSVENVIGTSMKDVLIGDAQANTLMGQ 1315
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 1316 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWF 1366
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 15/194 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 1097 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 1156
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 1157 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLG--LD 1213
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D K + EY E DL +
Sbjct: 1214 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGW 1273
Query: 376 GQDVFESMKHFYEF 389
+ +Y+
Sbjct: 1274 VRKAARRGMDYYDS 1287
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1169 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1228
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD V R ++Y S
Sbjct: 1229 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 1288
Query: 369 EDLIQVIGQDVFESM 383
+ VIG + + +
Sbjct: 1289 RSVENVIGTSMKDVL 1303
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 1338 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 1391
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 1392 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 1449
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 1450 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 1508
Query: 328 YDANEHKQDF 337
D +
Sbjct: 1509 LDGGDGNDTV 1518
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 1055 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 1114
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 1115 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 1174
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 1175 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 1206
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 1049 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 1108
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 1109 SNQLDGGAGVDTV 1121
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 58/207 (28%), Gaps = 33/207 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D + + + DL+
Sbjct: 1213 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEG 1272
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D T
Sbjct: 1273 -WVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVR 1322
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
L F + D L D ++ +
Sbjct: 1323 GGDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREH 1374
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ L G D + + G++ GR
Sbjct: 1375 DVLRGGAGVDTVDYSQAGAHAGVATGR 1401
>gi|226947109|ref|YP_002802182.1| secreted bifunctional mannuronan C-5 epimerase/alginate lyase
[Azotobacter vinelandii DJ]
gi|34395511|sp|Q9ZFG9|ALGE7_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 7; AltName:
Full=Mannuronan epimerase 7
gi|3873281|gb|AAD04921.1| mannuronan C-5-epimerase AlgE7 [Azotobacter vinelandii]
gi|226722036|gb|ACO81207.1| Secreted bifunctional mannuronan C-5 epimerase/alginate lyase
[Azotobacter vinelandii DJ]
Length = 856
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 16/184 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTE-S 249
G N+ Y I+ + T Y S G++ + T G G + + +
Sbjct: 327 GNTIVGSANSTYGIQERADG-----TDYTSIGNNSVSGTQRGIVQLSGTNSTFSGRSGDA 381
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ I G N + + + +VG SGND + G++ N+V +G+D G G D F +
Sbjct: 382 YQFIDGSTGNDLLTGTPIADLIVGGSGNDTLSGDAGNDVLEGGAGSDRLTGGEGADIFRF 441
Query: 310 YAPSYLYKIYRFE--NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV--KQRSILEYT 365
A S Y + I+ +DA+ + D L+ + D ++ V Y
Sbjct: 442 TAVSDSYYTASSSVADQILDFDASNDRID-LTGLGFTGLGDGYGGTLAVLANSDGSRTYL 500
Query: 366 ASYE 369
SYE
Sbjct: 501 RSYE 504
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G E + ++ + + E + G SGND + G N+V +G+D+ +G G D
Sbjct: 535 TIAGTEGDDSLTGNAMAEILDGGSGNDSLAGGLGNDVLRGGAGDDILNGGLGRDQLSGGE 594
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ +++ ++ ++ ++ D + D +
Sbjct: 595 GADIFRFTSVADSY--QNSGDNFSDLILDFD 623
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E ++G +G D++ G + +++ S D G SG D F + A ++ Y + +
Sbjct: 711 EELLGGAGRDILNGGAGDDILDGGSERDTLTGGSGADVFRFNATLDSFRNYDNGTSRVDD 770
Query: 329 DANEHKQDFLSDVERLRFAD 348
+ + L D+ L ++
Sbjct: 771 ITDFTVGEDLIDLSALGYSG 790
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ N+ ++G + ++ +G+D+ DG S DT + + +++ ++ YD
Sbjct: 706 GTELNEELLGGAGRDILNGGAGDDILDGGSERDTLTGGSGADVFRFNATLDSFRNYDNGT 765
Query: 333 HKQDFLSDV 341
+ D ++D
Sbjct: 766 SRVDDITDF 774
>gi|294677476|ref|YP_003578091.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294476296|gb|ADE85684.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 188
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 51/159 (32%), Gaps = 5/159 (3%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D L G + L S+ G + N T+ T + ++G +G D + G + N+
Sbjct: 24 DNSDNRLSAGADSDFVLGLGGADSLAGNDGNDTLLGGTGNDLLLGGAGTDRIDGGAGNDE 83
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ D G SG DT + + + D ++D FA
Sbjct: 84 IYGGKDADRLFGGSGSDTLSGDFGADTLSGGTGRDTFVFVARTADATDVITD-----FAF 138
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ T + D+ I V ++
Sbjct: 139 GETIQLKGFSGHASYETVNGNDVAVSIDGHVIALLEDAA 177
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ + G+D L +GG N + L I G N I + + G SG
Sbjct: 43 GGADSLAGNDGNDTL----LGGTGNDLLLGGAGTDRIDGGAGNDEIYGGKDADRLFGGSG 98
Query: 277 NDVVIGNSANNVFFESSGNDVF 298
+D + G+ + +G D F
Sbjct: 99 SDTLSGDFGADTLSGGTGRDTF 120
>gi|163737275|ref|ZP_02144693.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161389879|gb|EDQ14230.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 937
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 68/216 (31%), Gaps = 31/216 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Q T+ G+D L D +L+GGV N + T+ + ++ G + + T+
Sbjct: 324 DDQLSTGIGNDTLLGGEGNDTLNNSAGDDSLVGGVGNDSIVATDGFDTLEGGDGDDTMYG 383
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--- 321
+ ++G + ND++ G + N+ GNDV DG G DT +
Sbjct: 384 GNDDDLLLGGADNDLMYGETGNDSLDGGDGNDVMDGGVGNDTLMGGLGADTIAGGDGDDY 443
Query: 322 --------------------ENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQ 358
A N D L + + D
Sbjct: 444 IDGGDGDDSLTTGLGNDTLIGGAGNDTLRNSAGDDSLVGGTGDDSIVATDGNDTLEGGDG 503
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + L+ G D F +S+G
Sbjct: 504 ADTMYGGNDDDLLVGGAGDDKMYGEADADTFQMSDG 539
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 62/193 (32%), Gaps = 5/193 (2%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+Q G +L ++ V T+ G+D++ G N L E
Sbjct: 223 TLQTRAGLAGFTLSGDVLDDPVTTIIEQGDDTVMGGEGNDVV----YGQGGNDSLLGEEG 278
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S+ G + + I ++++G SG D + G ++ G+D G DT
Sbjct: 279 DDSLDGGDGDDVIEGGVGADTLMGGSGGDTLSGGDGDDYIEGGEGDDQLSTGIGNDTLLG 338
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ +++++ N+ + L D +L A +
Sbjct: 339 GEGNDTLNNSAGDDSLVGGVGNDSIVAT-DGFDTLEGGDGDDTMYGGNDDDLLLGGADND 397
Query: 370 DLIQVIGQDVFES 382
+ G D +
Sbjct: 398 LMYGETGNDSLDG 410
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 6/169 (3%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ GDD + D L G+ N L E ++ + ++ +
Sbjct: 302 GGSGGDTLSGGDGDDYIEGGEGDDQLSTGIGNDTLLGGEGNDTLNNSAGDDSLVGGVGND 361
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+V + G D + G ++ + + +D+ G + D + + + +
Sbjct: 362 SIVATDGFDTLEGGDGDDTMYGGNDDDLLLGGADNDLMYGETGNDSLDGGDGNDVMDGGV 421
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N+ L + + D L + LI G D
Sbjct: 422 GNDTLMGGL-GADTIAGGDGDDYIDGGDGDDSLTTGLGNDTLIGGAGND 469
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 30/141 (21%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK----NMTIAQHTV----IE------ 269
D G+D + G ++ID++ + S Y +T T+ IE
Sbjct: 538 DGFGNDTISGGEAGNDSDHIDMSNVTSSVSVTYSGFEAGQITDGADTISFSEIEQLTLTD 597
Query: 270 --------------SVVGSSGNDVVIGNSANNVFFESSGND--VFDGSSGLDTFFYYAPS 313
++ +G+D + ++ +G+D + G+DT + +
Sbjct: 598 QADVVDASADNAGVNIDAGAGDDTITFGEGDDSITGGAGDDDLLLTEGGGVDTVSDFDLN 657
Query: 314 YLYKIYRFENAIIVYDANEHK 334
+ + + V D
Sbjct: 658 DDDGNGFYNDQLDVSDLAGGS 678
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 17/50 (34%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
G+ G+D + ++ G+D+ G D + + +
Sbjct: 3 GTKGDDTMDAGEGDDTVAGEEGDDIISAGDGDDIVYGDMGDGFDQGVQAS 52
>gi|158336324|ref|YP_001517498.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158306565|gb|ABW28182.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
Length = 1842
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 74/225 (32%), Gaps = 6/225 (2%)
Query: 168 PQDSMMDASFGYCATPMVSDIVA--VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ D ++ + + DI A ++ +Y + +V+ T+
Sbjct: 1459 EGGTGTDTAYYQSTSDLNMDIDAAGIETLYANSGNDEITSTNGAKVKLYGQGGNDTLSSG 1518
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D LD GG + + T +++ G N T++ +++ G S +D++ +
Sbjct: 1519 SGSDRLD----GGAGDDVLTTTGGNNTLKGGSGNDTLSSGDGKDTLDGGSNDDILNAGAG 1574
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++ SGND +G SG D + + ++++ N+ + E
Sbjct: 1575 ADILKGGSGNDFLEGGSGNDQLYGGSGVDTLLGGEGDDSLYADSDNDLLDGGAGNDELFG 1634
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
++ S ++ FG
Sbjct: 1635 STGDNQLLGGDGNDALYGVNGSNNLQGGAGLDSLYGGSGDDQLFG 1679
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 65/177 (36%), Gaps = 4/177 (2%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + Y I Q + P + G ++L G + + I G + +I
Sbjct: 1167 GGDGYDIARAQGNQPVTLDL----GTSQIELAYGSGGDDVFTNSGTENVEIHGEAGDDSI 1222
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T E++ G GND ++ + N++ +G+D+ +G G D A +
Sbjct: 1223 TGGTGHENLDGGDGNDTILAGAGNDILSGGAGDDLLEGQEGNDVLSGNAGADTLMGGAGN 1282
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + +DV +L+ +D +++ + A + G ++
Sbjct: 1283 DTLNFDGDDTFDGGDGTDVAKLQSSDGLTLNIDDVSIEEIHGNAGNDQFTSSNGTNI 1339
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 14/183 (7%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIA 263
K T+ G D LD GG + I LN + + I G N +
Sbjct: 1534 TTTGGNNTLKGGSGNDTLSSGDGKDTLD----GGSNDDI-LNAGAGADILKGGSGNDFLE 1588
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G SG D ++G ++ + S ND+ DG +G D F +
Sbjct: 1589 GGSGNDQLYGGSGVDTLLGGEGDDSLYADSDNDLLDGGAGNDELFGSTGDNQLLGGDGND 1648
Query: 324 AIIVYDANEH-----KQDFLSD--VERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVI 375
A+ + + + D L + F D D + + +L+ A+ + LI
Sbjct: 1649 ALYGVNGSNNLQGGAGLDSLYGGSGDDQLFGDAGNDGLYAGAGNDVLDGGANNDTLIGQE 1708
Query: 376 GQD 378
G D
Sbjct: 1709 GND 1711
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 7/182 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + GDD+L + GG N ++ G N T++
Sbjct: 1347 DDTLTSGSGSDRLDGGSGDDVLSSSGGNNALFGGDGNDSLTTAGGKDTLDGGSGNDTLSS 1406
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+S++G SG+D++ G S N+ +G D G +G D ++ A + + +
Sbjct: 1407 GNGNDSLLGGSGDDLLDGGSGNDTLKGDAGADQLIGGAGNDKLYFDADDTVVEGGTGTDT 1466
Query: 325 IIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQDVFES 382
++ D + +E L + + + Y + L G D +
Sbjct: 1467 AYYQSTSDLNMDIDAAGIETLYANSGNDEITSTNGAKVKLYGQGGNDTLSSGSGSDRLDG 1526
Query: 383 MK 384
Sbjct: 1527 GA 1528
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 6/172 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVI 268
+ + T+Y G+D L GG + L E+ S I G N T+
Sbjct: 855 NDVLQGDAGLDTLYGGAGNDTL-----GGGDDADLLKGEAGSDILEGGAGNDTLFGGEEK 909
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G +G+DV+ G++ N+ G D G G D A + + + +
Sbjct: 910 DVLMGDAGDDVLSGDAGNDYLSGGEGADQLSGGEGQDVIEGGAGADVISGNTGNDEWLSG 969
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+A D S + L + + ++ A+ ++ G DV
Sbjct: 970 NAGNDIVDGGSGNDFLSGGEGADTLLGGDGNDVVFIDAADTQILGGEGYDVA 1021
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 53/156 (33%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GD+ +D G + ID + + G E I + + G G D ++GN+ N
Sbjct: 379 GDEGMDAIEGGQGNDTIDGGAGNDGWLSGGEGADLIDGGAGEDVLSGGRGTDTLLGNTGN 438
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V +GNDV DG G D + N ++ A E + +
Sbjct: 439 DVMMGDAGNDVLDGGEGDDYWVDGGDGNDLVEGGLGNDVVAGGAGEDTVSGGEGQDIVLG 498
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I++ + + + G D +
Sbjct: 499 NSGNDLMSGNAGNDIMDGGSGDDTIYGGTGNDFIDG 534
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 8/184 (4%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----GYEKNMT 261
Y ++Q + + + G D +GG + + ++ + SS+ G E N T
Sbjct: 657 TYTYKLQGGNGDTTALEFRAVGTDD----SLGGYLDSVSVHASTASSVNDVLMGGEGNDT 712
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I ++ + + G G+D++ G ++ F +G D DG +G D S +
Sbjct: 713 ILGNSGNDYLSGDQGDDILEGGLGDDTLFGGAGKDTLDGGTGHDELSGGLESDIISGGTG 772
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + N+ + ++ + + G D+
Sbjct: 773 NDTLAGDEGNDVLTGGAGNDILNAGTGDDYWVDGGTGNDVISGGTGNDIVSGGRGNDIVS 832
Query: 382 SMKH 385
+
Sbjct: 833 GGED 836
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 61/167 (36%), Gaps = 12/167 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + ++S+ G SG+D + G++ N+ + +GNDV DG + DT
Sbjct: 1650 LYGVNGSNNLQGGAGLDSLYGGSGDDQLFGDAGNDGLYAGAGNDVLDGGANNDTLIGQEG 1709
Query: 313 SYLYKIYRFENAIIVYDA----NEHKQDFLSDVE----RLRFADQCIDSVNVKQRSILEY 364
+ ++ ++ ++ D+++ E + D + + + L
Sbjct: 1710 NDTLLGGSGDDVLVGANSDTLKGSGSIDYMTGDEGADYFVLGGDVAYYNDGDETSAGLTD 1769
Query: 365 TASYEDLIQVIGQ-DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
A D + S + + G + +YL S D
Sbjct: 1770 FAVITDFNGSEDTIQLSGSASDYVLGASAPGMS---GTGIYLDSNGD 1813
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 65/178 (36%), Gaps = 16/178 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVV 272
S ++ G+D L T GG L+ S + + N ++ + + +
Sbjct: 1369 SSSGGNNALFGGDGNDSL--TTAGGKDT---LDGGSGNDTLSSGNGNDSLLGGSGDDLLD 1423
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYLY-KIYRFE 322
G SGND + G++ + +GND G +G DT +Y + S L I
Sbjct: 1424 GGSGNDTLKGDAGADQLIGGAGNDKLYFDADDTVVEGGTGTDTAYYQSTSDLNMDIDAAG 1483
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ++ + + + + D+++ S + +D++ G +
Sbjct: 1484 IETLYANSGNDEITSTNGAKVKLYGQGGNDTLSSGSGSDRLDGGAGDDVLTTTGGNNT 1541
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 13/177 (7%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
TI + G+D L D L GG+ + ++ G + ++ + +
Sbjct: 709 GNDTILGNSGNDYLSGDQGDDILEGGLGDDTLFGGAGKDTLDGGTGHDELSGGLESDIIS 768
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G+ N+V +GND+ + +G D ++ + I IV
Sbjct: 769 GGTGNDTLAGDEGNDVLTGGAGNDILNAGTGDD-YWVDGGTGNDVISGGTGNDIVSGGR- 826
Query: 333 HKQDFLSDVER----LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D +S E L ADQ + + + +L+ A + L G D
Sbjct: 827 -GNDIVSGGEDDDTVLGGADQDLLTGDAGN-DVLQGDAGLDTLYGGAGNDTLGGGDD 881
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 20/193 (10%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y G+ + I S SGG+D D T++GG + +
Sbjct: 802 YWVDGGTGNDVISGGTGNDIVSGGRGNDIVSGGED--DDTVLGGADQDL---------LT 850
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + ++++ G +GND + G ++ +G+D+ +G +G DT F
Sbjct: 851 GDAGNDVLQGDAGLDTLYGGAGNDTLGGGDDADLLKGEAGSDILEGGAGNDTLFGGEEKD 910
Query: 315 LY-----KIYRFENAIIVYDANEHKQDFLSDVE----RLRFADQCIDSVNVKQRSILEYT 365
+ +A Y + D LS E A + S N L
Sbjct: 911 VLMGDAGDDVLSGDAGNDYLSGGEGADQLSGGEGQDVIEGGAGADVISGNTGNDEWLSGN 970
Query: 366 ASYEDLIQVIGQD 378
A + + G D
Sbjct: 971 AGNDIVDGGSGND 983
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 11/188 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + GG D D T++GG + E + G T+
Sbjct: 267 DTLYGEQGHDIMDGGEGNDILYGGAD--DDTMMGGAGDDALFGGEHIDHMDGGTGTDTLY 324
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------K 317
+++ G GND++ G +V + +G D G +G D + L
Sbjct: 325 GGHGDDNIHGGEGNDLISGEGDQDVLYGDAGQDTISGGAGHDFIDGGVGNDLLSGDEGMD 384
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEYTASYEDLIQV 374
D +LS E D + L + ++
Sbjct: 385 AIEGGQGNDTIDGGAGNDGWLSGGEGADLIDGGAGEDVLSGGRGTDTLLGNTGNDVMMGD 444
Query: 375 IGQDVFES 382
G DV +
Sbjct: 445 AGNDVLDG 452
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 17/179 (9%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T++ G D LD G + +L+ S I I+ T +++ G GNDV
Sbjct: 738 DTLFGGAGKDTLD-----GGTGHDELSGGLESDI--------ISGGTGNDTLAGDEGNDV 784
Query: 280 VIGNSANNVFFESSGNDV-FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + N++ +G+D DG +G D + + R N I+ ++
Sbjct: 785 LTGGAGNDILNAGTGDDYWVDGGTGNDVISGGTGNDIVSGGR-GNDIVSGGEDDDTVLGG 843
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGR 395
+D + L L A + L D+ + E G
Sbjct: 844 ADQDLLTGDAGNDVLQGDAGLDTLYGGAGNDTLGGGDDADLLKGEAGSDILEGGAGNDT 902
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 13/121 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYE 257
G+ GN++ + + D G D D + GG N DL + + G
Sbjct: 434 GNTGNDVMMGDAGND-------VLDGGEGD--DYWVDGGDGN--DLVEGGLGNDVVAGGA 482
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
T++ + V+G+SGND++ GN+ N++ SG+D G +G D L +
Sbjct: 483 GEDTVSGGEGQDIVLGNSGNDLMSGNAGNDIMDGGSGDDTIYGGTGNDFIDGGQEDSLGQ 542
Query: 318 I 318
I
Sbjct: 543 I 543
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 53/159 (33%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GD D+ + G +Y ++ G + ++ + V G GND ++GN
Sbjct: 134 GDQGADMIIGGQGDDYWLAGEAGDDTLHGDAGDDILSGGEGNDFVTGGVGNDNLLGNEGQ 193
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ SG D DG +G D + K ++ I+ N+ + E +
Sbjct: 194 DSLLAGSGADYVDGGTGDDLVDGGEGADTLKGGLGDDKILGQSGNDILMGEAGNDELIGG 253
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + L ++ + G D+
Sbjct: 254 AGDDYWMSGGEGSDTLYGEQGHDIMDGGEGNDILYGGAD 292
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 42/132 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E N + ++++G+ G D ++ S + +G+D+ DG G DT
Sbjct: 169 LSGGEGNDFVTGGVGNDNLLGNEGQDSLLAGSGADYVDGGTGDDLVDGGEGADTLKGGLG 228
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ N+ D + + + I++ + L
Sbjct: 229 DDKILGQSGNDILMGEAGNDELIGGAGDDYWMSGGEGSDTLYGEQGHDIMDGGEGNDILY 288
Query: 373 QVIGQDVFESMK 384
D
Sbjct: 289 GGADDDTMMGGA 300
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 61/214 (28%), Gaps = 14/214 (6%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y+M D +G ++ +YG G+ + + +
Sbjct: 258 YWMSGGEGSDTLYGEQGHDIMDGGEGNDILYG---GADDDTMMGGAGDDALFGGEHIDHM 314
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG L G N I G E N I+ + + G +G D + G +
Sbjct: 315 DGGTGTDTLYGGHGDDN-----------IHGGEGNDLISGEGDQDVLYGDAGQDTISGGA 363
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ GND+ G G+D + + + D + + L
Sbjct: 364 GHDFIDGGVGNDLLSGDEGMDAIEGGQGNDTIDGGAGNDGWLSGGEGADLIDGGAGEDVL 423
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ A + L G D
Sbjct: 424 SGGRGTDTLLGNTGNDVMMGDAGNDVLDGGEGDD 457
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 44/147 (29%), Gaps = 3/147 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGND-VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G I + ++G G+D + G + ++ +G+D+ G G D F
Sbjct: 125 GGLGKDAIMGDQGADMIIGGQGDDYWLAGEAGDDTLHGDAGDDILSGGEGND-FVTGGVG 183
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ ++ + D + + + + + + + L+
Sbjct: 184 NDNLLGNEGQDSLLAGSGADYVDGGTGDDLVDGGEGADTLKGGLGDDKILGQSGNDILMG 243
Query: 374 VIGQDV-FESMKHFYEFGLSEGRDITF 399
G D Y EG D +
Sbjct: 244 EAGNDELIGGAGDDYWMSGGEGSDTLY 270
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 9/129 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDV-VIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G E + + ++++G G+DV + GN ++V +GND G G D
Sbjct: 12 LFGSEADDVVVGKEGDDTIIGGEGDDVWLSGNEGDDVVKGGTGNDTLSGGQGNDWMHGDE 71
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ FAD S + +L + L
Sbjct: 72 GGTQNWQQDASGNYTYTGPIDESGA--------GFADPNAISSGTQNDDLLLGGIGNDVL 123
Query: 372 IQVIGQDVF 380
I +G+D
Sbjct: 124 IGGLGKDAI 132
Score = 45.5 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 47/158 (29%), Gaps = 6/158 (3%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ G+ + + D N S G + + + + ++G G D ++G+
Sbjct: 80 DASGNYTYTGPIDESGAGFADPNAIS----SGTQNDDLLLGGIGNDVLIGGLGKDAIMGD 135
Query: 284 SANNVFFESSGNDV-FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++ G+D G +G DT A + N + +
Sbjct: 136 QGADMIIGGQGDDYWLAGEAGDDTLHGDAGDDILS-GGEGNDFVTGGVGNDNLLGNEGQD 194
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L +++ + L +G D
Sbjct: 195 SLLAGSGADYVDGGTGDDLVDGGEGADTLKGGLGDDKI 232
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 63/211 (29%), Gaps = 26/211 (12%)
Query: 200 GSLGNNIYK-IEVQQKDSPFIQTIYDSGGDD--------------LLDLTLIGGVKNYID 244
G+ G++++ + ++ +GG+D D TL GG
Sbjct: 1043 GNSGDDVFTHTNGAGTPASTTVALFGNGGNDQLSGGSANDYLEGGTGDDTLAGGAGEDTA 1102
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF------ 298
+ E I G + + +++ G + ND+++G + + G+D
Sbjct: 1103 IAGEGNDLISGEAGHDYMDGGAGDDTLEGGTENDMLVGGDGADALYGGEGSDTLLFDADD 1162
Query: 299 ---DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
DG G D + + Y + S E + + D
Sbjct: 1163 TVVDGGDGYDIARAQGNQPVTLDLGTSQIELAYGSGGDDVFTNSGTENVEIHGEAGDDSI 1222
Query: 356 VKQRS--ILEYTASYEDLIQVIGQDVFESMK 384
L+ + ++ G D+
Sbjct: 1223 TGGTGHENLDGGDGNDTILAGAGNDILSGGA 1253
>gi|169146013|emb|CAQ13516.1| matrix metalloproteinase 14 (membrane-inserted) beta [Danio rerio]
Length = 621
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 54/189 (28%), Gaps = 35/189 (18%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W I + T ++ E R A W V L F E S
Sbjct: 112 WDKNEITFCIQNYTPKVGEYETFE-------AIRKAFKVWESVTPLRFREISYSDIRDKV 164
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIG--KGT 118
H D G++ + + +FD A+ W G G
Sbjct: 165 VDFADIMLFFADGFHGDASPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTIGNKDLLGN 224
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVY----GVDNDYENDSFLTSVMSYFMPQDSMMD 174
+ A+HE+GHALG+ H + + D+ D + + P
Sbjct: 225 DVFLVAVHELGHALGMEHSNDPSAIMAPFYQWMETDHFVLPDDDRKGIQKLYGPGSGGHP 284
Query: 175 ASFGYCATP 183
+ TP
Sbjct: 285 RTPVTPETP 293
>gi|307321266|ref|ZP_07600667.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306893076|gb|EFN23861.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 412
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + T+ + ++ SGND +IGN+ +++ F GND G +G D A
Sbjct: 292 TIVGNSSSQTMMGGIGADKIMAGSGNDTLIGNAGDDLLFGELGNDTILGGAGKDRLDGGA 351
Query: 312 PSYLYKIYRFENAIIVY------DANEHKQDFLSDVERL 344
+ + + N+ D ++
Sbjct: 352 GNDTASYESATAGVKASLAAKSTNTNDAAGDSYYGIDNH 390
>gi|163744437|ref|ZP_02151797.1| Hemolysin-type calcium-binding protein [Oceanibulbus indolifex
HEL-45]
gi|161381255|gb|EDQ05664.1| Hemolysin-type calcium-binding protein [Oceanibulbus indolifex
HEL-45]
Length = 950
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 65/207 (31%), Gaps = 18/207 (8%)
Query: 204 NNIYKIEVQQKDSPFIQ--TIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS-IGGY 256
+ IY T+Y G D++D G L + + G
Sbjct: 474 DLIYGGAGDDTLQGGADGDTLYGGDGADVIDGGTGNDLIYGDAGDDSLEGGAGDDTVYGG 533
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N TI + + G +GND++ G + ++ G+D+ G +G D A +
Sbjct: 534 IGNDTIDGGAENDLLDGGAGNDLLYGGAGDDQLEGGGGDDIVHGGAGADVISGGAGNDKL 593
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR---SILEYTASYEDLIQ 373
F +A + D++ + D + L A + L
Sbjct: 594 ----FGDAGSDRISGGEGNDYVDG----GYGDDYLSGDGRGAGGGHDTLVGGAGNDTLDG 645
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFD 400
G D F +SEG D D
Sbjct: 646 GAGNDQLIGGDGNDLFRVSEGHDTVSD 672
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 1/133 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ ++ ++V+G SG+D ++G N+ GND G G DT A
Sbjct: 394 DGSANSGDLGVSAGDGDDTVLGGSGDDYLLGEGGNDQLAGGEGNDTIYGGLGDDTIDGGA 453
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ L ++I D + D + L+ +++ + +
Sbjct: 454 GNDLLDGEEGHDSISGGDGADLIYGGAGD-DTLQGGADGDTLYGGDGADVIDGGTGNDLI 512
Query: 372 IQVIGQDVFESMK 384
G D E
Sbjct: 513 YGDAGDDSLEGGA 525
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 8/159 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D T++GG + L + G E N TI +++ G +GND++ G ++
Sbjct: 410 DDTVLGGSGDDYLLGEGGNDQLAGGEGNDTIYGGLGDDTIDGGAGNDLLDGEEGHDSISG 469
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--------ENAIIVYDANEHKQDFLSDVER 343
G D+ G +G DT A N +I DA + + + +
Sbjct: 470 GDGADLIYGGAGDDTLQGGADGDTLYGGDGADVIDGGTGNDLIYGDAGDDSLEGGAGDDT 529
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + +L+ A + L G D E
Sbjct: 530 VYGGIGNDTIDGGAENDLLDGGAGNDLLYGGAGDDQLEG 568
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 5/158 (3%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + +Y G D +D G N E I G
Sbjct: 183 AHYTDADGDSIDDGRGGGAEGNDDVVYGGDGTDKID----AGAGNDTVFGEEGRDYIRGG 238
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ ++ +++VG G D + G + N+V +GNDV DG SG D + A Y
Sbjct: 239 AGDDSLQGGGGSDTLVGGDGADTLEGGACNDVLNGGAGNDVLDGGSGDDHLWDGAG-DDY 297
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ I A + + +D
Sbjct: 298 ADGGAGDDIFYMGAGSDTLHGGTGRDSFVASDGFGSDT 335
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 63/213 (29%), Gaps = 32/213 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQT--IYDSGGDDLL-----DLTLIGGVKNYI-------DLNTE 248
+ +Y + + G+DLL D L GG + I D+ +
Sbjct: 527 DDTVYGGIGNDTIDGGAENDLLDGGAGNDLLYGGAGDDQLEGGGGDDIVHGGAGADVISG 586
Query: 249 SWSS--IGGYEKNMTIAQHTVIESVVGSSGND--------------VVIGNSANNVFFES 292
+ + G + I+ + V G G+D ++G + N+
Sbjct: 587 GAGNDKLFGDAGSDRISGGEGNDYVDGGYGDDYLSGDGRGAGGGHDTLVGGAGNDTLDGG 646
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND G G D F + F N D + D L D+
Sbjct: 647 AGNDQLIGGDGNDLFRVSEGHDTVSDFGFGNTGRTGDGDSSNNDVLDLGAYYDSLDELRA 706
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
IL + +++D + +
Sbjct: 707 DQADD--GILNQSNTHDDEGNAVDYTDNTRFQD 737
>gi|78099010|sp|Q9EPL6|MMP1B_MOUSE RecName: Full=Interstitial collagenase B; AltName: Full=Matrix
metalloproteinase-1b; Short=MMP-1b; AltName:
Full=Mcol-B; Flags: Precursor
gi|11877302|emb|CAC18879.1| putative matrix metalloproteinase [Mus musculus]
Length = 463
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 65/210 (30%), Gaps = 52/210 (24%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A + + W+ + Y T + + +AR A W
Sbjct: 86 KPRCGVPDVAPYAITHNNPRWTKTHLTYSILNYTPYLSKAVV------EDAIAR-AFRVW 138
Query: 63 SKVVDLTFEET-------------SIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKAD 108
S V LTF+ H D+ F S + +++D
Sbjct: 139 SDVTPLTFQRVFEEEGDIVLSFHRGDHGDLYTFDGSKYHFAHAFLPGLGLGGNVHYDLDQ 198
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY-FM 167
W + L + HE+GH+LGL H ND SY +
Sbjct: 199 KWTDN-NEDFNLFYVTAHELGHSLGLSHS-----------------NDEEALMFPSYTWS 240
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+D +++ DI +Q +YG
Sbjct: 241 NKDFVLNQ----------DDINRIQALYGP 260
>gi|126352506|ref|NP_001075273.1| collagenase 3 precursor [Equus caballus]
gi|5921828|sp|O18927|MMP13_HORSE RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|2641648|gb|AAB86893.1| matrix metalloproteinase 13 [Equus caballus]
Length = 472
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 59/193 (30%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R W + Y+ T ++ ++ + A WS V L F + +
Sbjct: 110 RTLKWPKMNLTYRIVNYTPDLTHSEV-------EKAFKKAFKVWSDVTPLNFTRLYNGTA 162
Query: 78 DI--KFISSNNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI F + +G P Y + +FD + W KG L A
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 221
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GH+LGL H + + +Y ++
Sbjct: 222 AHEFGHSLGLDHSKDPGA---------------LMFPIYTYTGKSHFVLP---------- 256
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 257 DDDVQGIQYLYGP 269
>gi|330890709|gb|EGH23370.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 1526
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSS 252
+ ++ Y ++ Q + + + L+ D TL G + + + +
Sbjct: 153 NHFINDSTYGYQINQIQFADGDVLSLAAINALVPQSSNADETLTGFASDDVIDGSGGDDT 212
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N +++ T +++ G GND++ G S N+V S+GNDV DG +G D A
Sbjct: 213 LNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGSGNDVLNGSAGNDVLDGGAGNDRLDGGAG 272
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+Y + ++Y ANE + + ++ + I +L
Sbjct: 273 DDIYLFGKGSGQDVIYYANEARTGKVDTIQLVGLNAGDISISRAGYDLVLR 323
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 13/157 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + T+Y + G+D L G + + + + G N
Sbjct: 380 YGTDDLIEAGAGDDTVYGAAGNDKL----FGNSGDDVVNGDDGDDLVQGGSGN------- 428
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G +GNDV+ G + N++ +GND+ DG +G D A Y +
Sbjct: 429 --DTLNGGAGNDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDTYLFGKGSGQDT 486
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+Y ANE + + ++ + I ++
Sbjct: 487 IYYANETRTGKVDTIQLVGLGAADISVSRDGSDLVIR 523
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D + ID +I G N T+ + +++ G GND++ G + N
Sbjct: 752 GNDADQYLAGYATDDLID-AGGGDDTINGAAGNDTLIGGSGADTLSGEEGNDLLQGGAGN 810
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
++ +GNDV DG +G D A Y + +Y ANE
Sbjct: 811 DILNGGAGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANE 856
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 2/128 (1%)
Query: 232 DLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D DL I G N +A +++ G GND++ G S N+
Sbjct: 572 DADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLAGGAGADTLSGDEGNDLLQGGSGNDTL 631
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+DV DG +G D A Y + +Y NE + + ++ +
Sbjct: 632 TGGAGDDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTLYYVNEARAGKVDTIQLVGLGVS 691
Query: 350 CIDSVNVK 357
+
Sbjct: 692 DVSVSRDG 699
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N T++ + +++ G GNDV+ G + + +GND DG +G D
Sbjct: 1140 SVNGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKDSLYGGNGNDQLDGGAGNDMLDGGN 1199
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + +Y A E + D L V+ + + ++ + + L
Sbjct: 1200 GDDTYLFGKGSGQDSIYYAYEGRADKLDTVKLIDLNAADVSVRRDGNDLLIRVLGTTDSL 1259
Query: 372 IQVIGQDVFE 381
V
Sbjct: 1260 RVVAHFTNDA 1269
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + G V N DLN + S++ +TI E++ G +G+D + GN +
Sbjct: 18 GIDQIQFA-DGVVWNKDDLNA-NLSTVVPVSS-LTITGTEANETLTGGAGHDTLYGNGGD 74
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++ +GND DG G DT+ + S + ++ D
Sbjct: 75 DILEGGAGNDRLDGGYGNDTYVFGKGSGQDTVLAYDPVSTRVDV 118
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D + + + G L + I + TI ++++G SG D + G
Sbjct: 741 GQDTIKIQALLGNDADQYLAGYATDDLIDAGGGDDTINGAAGNDTLIGGSGADTLSGEEG 800
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
N++ +GND+ +G +G D A + ++ + + + ++
Sbjct: 801 NDLLQGGAGNDILNGGAGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYAN 855
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 2/130 (1%)
Query: 244 DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
DL + G + +S+ G G+D + G + N+ SGNDV DG
Sbjct: 948 DLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSGNDVLDGG 1007
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G D A Y + +Y ANE + + V+ + + +
Sbjct: 1008 AGNDRLDGGAGDDTYLFGKGSGQDTIYYANESRAGKVDQVKLVDLNAADVSVARDGYDLV 1067
Query: 362 LEYTASYEDL 371
+ + + L
Sbjct: 1068 IRILGTTDTL 1077
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
TE+ ++ G + I +SV G SGND + G S + GNDV +G G D+
Sbjct: 1117 TEADETLSGTGSDDVIYAAAGDDSVNGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKDS 1176
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + D +L
Sbjct: 1177 LYGGNGNDQLD---GGAGNDMLDGGNGDDTYLFG 1207
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + + + ID ++ G + T++ +++ G +G+D+++G N
Sbjct: 1298 GTDADETLAGTAISDSIDAGAGDD-TVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMGN 1356
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ GND+ DG +G D Y R VY A E + L
Sbjct: 1357 DTLNGGLGNDILDGGAGNDRLDGGDGDDTYLFARGAGQDTVYYAYESRIGKL 1408
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 37/102 (36%), Gaps = 1/102 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +A + + + G +G+D ++G + N+ +G D G G D +
Sbjct: 568 LQGSDADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLAGGAGADTLSGDEGNDLLQGGSG 627
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + ++ A + D + + F
Sbjct: 628 NDTLT-GGAGDDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDT 668
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G+ + I +++ G +G D ++G + G+D +G +G D+ +
Sbjct: 941 LTGFASDDLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSG 1000
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + D +L
Sbjct: 1001 ND---VLDGGAGNDRLDGGAGDDTYLFG 1025
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + +D++ ++ ++GND G SG DT + L + N I+ A
Sbjct: 761 GYATDDLIDAGGGDDTINGAAGNDTLIGGSGADTLSGEEGNDLLQ-GGAGNDILNGGAGN 819
Query: 333 HKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D + +RL D + + Y + E + Q +
Sbjct: 820 DVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYY--ANETRAGKVDQVKLVGLNAADVSV 877
Query: 391 LSEGRDIT 398
+ EG D+
Sbjct: 878 VREGYDLV 885
Score = 44.7 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ G + I S+ + + E++ G+ GNDV+ + ++V
Sbjct: 1449 NDATYGYQIDRIQFADGSFWDQSAIKNQVLQGSDAD-ETLSGTGGNDVIDAGAGDDVING 1507
Query: 292 SSGNDVFDGSSGLDTFFYY 310
+ GND G +G DT
Sbjct: 1508 AVGNDTLTGKAGADTLNGG 1526
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 8/148 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ + + G +++ +G+D G++G D F + + ++ + N+
Sbjct: 370 GTDADQYLEGYGTDDLIEAGAGDDTVYGAAGNDKLFGNSGDDVVNGDDGDDLVQGGSGND 429
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ + L +L+ A + L G D Y FG
Sbjct: 430 TLNGGAGN-DVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDT-------YLFGKG 481
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRG 420
G+D + + D + G
Sbjct: 482 SGQDTIYYANETRTGKVDTIQLVGLGAA 509
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 10/100 (10%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G+ A+ + +D+ DG +G DT A + A + + D L
Sbjct: 567 VLQGSDADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLA----GGAGADTLSGDEGNDLL 622
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+L+ A + L G D
Sbjct: 623 QG------GSGNDTLTGGAGDDVLDGGAGNDRLDGGAGDD 656
>gi|170724846|ref|YP_001758872.1| outer membrane adhesin-like protein [Shewanella woodyi ATCC 51908]
gi|169810193|gb|ACA84777.1| outer membrane adhesin like proteiin [Shewanella woodyi ATCC 51908]
Length = 3229
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/225 (20%), Positives = 74/225 (32%), Gaps = 21/225 (9%)
Query: 165 YFMPQDSMMDASFGYCATPMVSD--IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT- 221
++ + +M A F Y SD I + I G +I+ I D Q
Sbjct: 2946 FYDVETGLMRAEFDYSIIVQESDPSITLIDYINSNNYTPAGGDIWTITYLDNDGGSYQAR 3005
Query: 222 ------IYDSGGDDLLDLTLIGGVKNYI-------DLNTESWSS-IGGYEKNMTIAQHTV 267
++DS GD L +T GV N + L + I E + +
Sbjct: 3006 FVQANFVFDSQGDPSLTITGTAGVDNLLFGGTSHDTLTGAELNDRIFAREGDDLLDGADG 3065
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ +VG SGND + G + N+ + NDV DG +G D S +
Sbjct: 3066 DDELVGGSGNDTITGGAGNDYLNGGADNDVLDGGTGSDILIGGMGSDTLDAGLDSDNDTF 3125
Query: 328 ---YDANEHKQDFLSDVE-RLRFADQCIDSVNVKQRSILEYTASY 368
+ D + + D ++ + S+ Y
Sbjct: 3126 IWQTGDADASSDIVQNFNLSHDILDLSEVLLDEENNSLESYFTFN 3170
>gi|47205892|emb|CAF91519.1| unnamed protein product [Tetraodon nigroviridis]
Length = 461
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 29/162 (17%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--- 72
++ Q W I Y + T ++ + E + R AL W +V LTF+E
Sbjct: 114 YVTTAQRWDKDHITYS---ILTQQIPSSLGERRTL--DTIRKALDMWQRVTPLTFKELPA 168
Query: 73 -----------------TSIHSDIKFISSNNGYVCTPRYDSRY-FMEINFDKADVWRYGI 114
+ H D+ G + Y + +FD + W
Sbjct: 169 VPSSNQSALADIMLLFASGFHGDMSLFDGPGGSLAHAFYPGPGMGGDTHFDADEHWTLDS 228
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
G L A+HE+GHALGL H + + P+Y + +
Sbjct: 229 QSEEGIDLFLVAVHELGHALGLEHSENPSAVMAPLYRWRHTH 270
>gi|281341734|gb|EFB17318.1| hypothetical protein PANDA_011006 [Ailuropoda melanoleuca]
Length = 442
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 62/217 (28%), Gaps = 50/217 (23%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP + D W + Y+ AL W
Sbjct: 54 KPRCGVPDVGDFTTFPGMPRWRKTHLTYRIMNYMLDLPR-------DAVDSAIEKALSLW 106
Query: 63 SKVVDLTFEETSIH-SDIKFIS-----------SNNGYVCTPRY--DSRYFMEINFDKAD 108
+V LTF + +DIK + G V Y + + +FD +
Sbjct: 107 EEVTPLTFSKADDGEADIKILFAVRDHGDFNPFDGPGKVLAHAYPPGPGIYGDAHFDDDE 166
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W GT L A HE+GH+LGL H YPVY D
Sbjct: 167 PWTRDT-SGTNLFLVAAHELGHSLGLFHSADPRALMYPVYNARTDLARLRLS-------- 217
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
D+ +Q +YG+P S +
Sbjct: 218 -----------------QDDVAGIQSLYGSPSVSPDD 237
>gi|163740316|ref|ZP_02147710.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
2.10]
gi|161386174|gb|EDQ10549.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
2.10]
Length = 937
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 68/216 (31%), Gaps = 31/216 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Q T+ G+D L D +L+GGV N + T+ + ++ G + + T+
Sbjct: 324 DDQLSTGIGNDTLLGGEGNDTLNNSAGDDSLVGGVGNDSIVATDGFDTLEGGDGDDTMYG 383
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--- 321
+ ++G + ND++ G + N+ GNDV DG G DT +
Sbjct: 384 GNDDDLLLGGADNDLMYGETGNDSLDGGDGNDVMDGGVGNDTLMGGLGADTIAGGDGDDY 443
Query: 322 --------------------ENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQ 358
A N D L + + D
Sbjct: 444 IDGGDGDDSLTTGLGNDTLIGGAGNDTLRNSAGDDSLVGGTGDDSIVATDGNDTLEGGDG 503
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + L+ G D F +S+G
Sbjct: 504 ADTMYGGNDDDLLVGGAGDDKMYGEADADTFQMSDG 539
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 62/193 (32%), Gaps = 5/193 (2%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+Q G +L ++ V T+ G+D++ G N L E
Sbjct: 223 TLQTRAGLAGFTLSGDVLDDPVTTIIEQGDDTVMGGDGNDVV----YGQGGNDSLLGEEG 278
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S+ G + + I ++++G SG D + G ++ G+D G DT
Sbjct: 279 DDSLDGGDGDDVIEGGVGADTLMGGSGGDTLSGGDGDDYIEGGEGDDQLSTGIGNDTLLG 338
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ +++++ N+ + L D +L A +
Sbjct: 339 GEGNDTLNNSAGDDSLVGGVGNDSIVAT-DGFDTLEGGDGDDTMYGGNDDDLLLGGADND 397
Query: 370 DLIQVIGQDVFES 382
+ G D +
Sbjct: 398 LMYGETGNDSLDG 410
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 6/169 (3%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ GDD + D L G+ N L E ++ + ++ +
Sbjct: 302 GGSGGDTLSGGDGDDYIEGGEGDDQLSTGIGNDTLLGGEGNDTLNNSAGDDSLVGGVGND 361
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+V + G D + G ++ + + +D+ G + D + + + +
Sbjct: 362 SIVATDGFDTLEGGDGDDTMYGGNDDDLLLGGADNDLMYGETGNDSLDGGDGNDVMDGGV 421
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N+ L + + D L + LI G D
Sbjct: 422 GNDTLMGGL-GADTIAGGDGDDYIDGGDGDDSLTTGLGNDTLIGGAGND 469
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 30/141 (21%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY----EKNMTIAQHTV----IE------ 269
D G+D + G ++ID++ + S Y +T T+ IE
Sbjct: 538 DGFGNDTISGGEAGNDSDHIDMSNVTSSVSVTYSGFETGQITDGADTISFSEIEQLTLTD 597
Query: 270 --------------SVVGSSGNDVVIGNSANNVFFESSGND--VFDGSSGLDTFFYYAPS 313
++ +G+D + ++ +G+D + G+DT + +
Sbjct: 598 QADVVDASADNAGVNIDAGAGDDTITFGEGDDSITGGAGDDDLLLTEGGGVDTVSDFDLN 657
Query: 314 YLYKIYRFENAIIVYDANEHK 334
+ + + V D
Sbjct: 658 DDDGNGFYNDQLDVSDLAGGS 678
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 7/45 (15%), Positives = 16/45 (35%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
G+ G+D + ++ G+D+ G D + +
Sbjct: 3 GTKGDDTMDAGEGDDTVAGEEGDDIISAGDGDDIVYGDMGDGFDQ 47
>gi|149916055|ref|ZP_01904578.1| RTX toxins and related Ca2+-binding proteins-like protein
[Roseobacter sp. AzwK-3b]
gi|149810129|gb|EDM69977.1| RTX toxins and related Ca2+-binding proteins-like protein
[Roseobacter sp. AzwK-3b]
Length = 664
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 57/175 (32%), Gaps = 22/175 (12%)
Query: 201 SLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYE 257
S +++ + T+ GDDLL IG + I L S + + G +
Sbjct: 383 STDDDLSGTDADDLIHAGDGADTVLGGAGDDLL----IGAAGDDI-LTGGSGNDRLAGEQ 437
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-----------GSSGLDT 306
N T+ + + G +G+D++ + ++ F +GND G +G D
Sbjct: 438 GNDTLDGGVGDDILTGGAGDDILWDGTGADLLFGDAGNDTIYLADDLEADQVHGGTGDDI 497
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
A + + + D+ D +E D +
Sbjct: 498 LVLTAGARTAHVDMAAGKVTRSDSP---TDTFDGIEIFTAGDGTEVFDLSGFFTP 549
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + I ++V+G +G+D++IG + +++ SGND G G DT
Sbjct: 387 DLSGTDADDLIHAGDGADTVLGGAGDDLLIGAAGDDILTGGSGNDRLAGEQGNDTLDGGV 446
Query: 312 PSYLYKIYRF-----ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + D + + L + +
Sbjct: 447 GDDILTGGAGDDILWDGTGADLLFGDAGNDTIYLADDLEADQVHGGTGDDILVLTAGART 506
Query: 367 SYEDLIQ 373
++ D+
Sbjct: 507 AHVDMAA 513
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 3/122 (2%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ T D G D DL G + + L + G + + + + + G GN
Sbjct: 381 GLSTDDDLSGTDADDLIHAGDGADTV-LGGAGDDLLIGAAGDDILTGGSGNDRLAGEQGN 439
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G +++ +G+D+ +G D F A + IY ++ D
Sbjct: 440 DTLDGGVGDDILTGGAGDDILWDGTGADLLFGDAGND--TIYLADDLEADQVHGGTGDDI 497
Query: 338 LS 339
L
Sbjct: 498 LV 499
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 6/109 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + ++ + + G D V+G + +++ ++G+D+ G SG D
Sbjct: 379 TFGLSTDDDLSGTDADDLIHAGDGADTVLGGAGDDLLIGAAGDDILTGGSGNDRLAGEQG 438
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQR 359
+ ++ + D L D L F D D++ +
Sbjct: 439 NDTLDGGVGDDILT----GGAGDDILWDGTGADLLFGDAGNDTIYLADD 483
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 39/126 (30%), Gaps = 10/126 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G S +D + G A+++ G D G +G D A + + +
Sbjct: 377 DITFGLSTDDDLSGTDADDLIHAGDGADTVLGGAGDDLLIGAAGDDILTGGSGNDRLAGE 436
Query: 329 DANEH-----KQDFLSD--VERLRFADQCIDSVNVKQRSILEYTAS---YEDLIQVIGQD 378
N+ D L+ + + + D + + Y A + + G D
Sbjct: 437 QGNDTLDGGVGDDILTGGAGDDILWDGTGADLLFGDAGNDTIYLADDLEADQVHGGTGDD 496
Query: 379 VFESMK 384
+
Sbjct: 497 ILVLTA 502
Score = 37.8 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 30/112 (26%), Gaps = 1/112 (0%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ D+ G S ++ + +D+ G DT A L I + I+ + +
Sbjct: 374 AARDITFGLSTDDDLSGTDADDLIHAGDGADTVLGGAGDDLL-IGAAGDDILTGGSGNDR 432
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ L IL + L G D
Sbjct: 433 LAGEQGNDTLDGGVGDDILTGGAGDDILWDGTGADLLFGDAGNDTIYLADDL 484
>gi|66968578|ref|YP_245455.1| HlyJ haemolysin-like protein [Pseudomonas aeruginosa]
gi|66862660|emb|CAI46960.1| HlyJ haemolysin-like protein [Pseudomonas aeruginosa]
Length = 3064
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 4/150 (2%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GS N + + ++TI +++GG + +I G
Sbjct: 2668 NGSTANQVTLKDFFLGGDNLVETIAFETGGQLTAEQIFGAFGLAVPTPAAAFDDTIQGST 2727
Query: 258 KNMTIAQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ T + + G +G DV+ G++ N+ +G+D DG +G DT Y
Sbjct: 2728 GDDAALDGTAGNDLLQGGNGGDVLFGDAGNDRLEGGNGDDTLDGGTGNDTLVGGRGDDTY 2787
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRF 346
I+ V D + D L E + F
Sbjct: 2788 -IFAAGGGQDVIDNSGGGADTLH-FEGISF 2815
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 56/183 (30%), Gaps = 15/183 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
Q + T+ G D LD GG N + L + G E + + +
Sbjct: 1311 NDQLYGNAGNDTLLGGDGHDTLD----GGTGNDVLLGDTGNDVLRGGEGDDYLDGGDGND 1366
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFE 322
++ G SG+D +IG + N+ +G D G G DT A ++
Sbjct: 1367 TLDGGSGDDTLIGGAGNDYLSGGAGRDTLQGGDGNDTLLGGAGDDFLAGGKGNDRLDGGT 1426
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A QD + D + ++ L + + L +
Sbjct: 1427 GTNSYLFARGDGQDVIVD----AYEGVVTIYLSDLPLDTLVFRRNGTSLEVAFPDSPDDK 1482
Query: 383 MKH 385
+
Sbjct: 1483 LSL 1485
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 33/89 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N I T + + G+DV+ G S N+ +G DV DG +G D +
Sbjct: 1565 LYAGSGNDLIDGGTGDDLIDAGEGDDVLHGGSGNDTLLGGAGADVLDGGTGDDRLEGGSG 1624
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
LY+ + D+ + V
Sbjct: 1625 DDLYRFAVGWGNDFIIDSTGSDSVQFTGV 1653
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 43/119 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N +I + + SGND++ G + +++ G+DV G SG DT A
Sbjct: 1547 VHAGAGNDSIYGGDGSDRLYAGSGNDLIDGGTGDDLIDAGEGDDVLHGGSGNDTLLGGAG 1606
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ + ++ + + DSV + + + +
Sbjct: 1607 ADVLDGGTGDDRLEGGSGDDLYRFAVGWGNDFIIDSTGSDSVQFTGVAPTDLLLRRDGV 1665
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/247 (19%), Positives = 80/247 (32%), Gaps = 24/247 (9%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G GND + G + N+ F SGND DG +G D Y IY
Sbjct: 2220 GRAGNDLIHGEGGNDYLEGEAGNDTLFGGSGNDQLDGGAGDDLLVGGTGDDKY-IYAPGG 2278
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
V D + D + N + L + +DL+ ++ D +S+
Sbjct: 2279 GADVIDNSGGGYD-------------GVFFTNGIGQDRLTFGRDGDDLLILVDGDTAQSV 2325
Query: 384 KHFYEFGLSEGRDITF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ F L + I+F S YL + + + ++ + A + G G +
Sbjct: 2326 RVLDHF-LGGDKAISFVQPSGGYLLTAERIGHIVAAQGVAGDFEALIEGTAAGEQLAGYD 2384
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
DL+ A L +G D G + D L G+
Sbjct: 2385 GR-------DLLRGLAGNDTLFGMGGDDRIEGGDGNDYLSGGNGQHNGSGNDLLIGGAGN 2437
Query: 502 DRGAAAR 508
D A
Sbjct: 2438 DILAGED 2444
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 53/168 (31%), Gaps = 24/168 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ E N I + + + G GND + GN+ N+ G+D DG +G D
Sbjct: 1287 LQAGEGNDVIQGYASDDLLSGLEGNDQLYGNAGNDTLLGGDGHDTLDGGTGNDVLLGDTG 1346
Query: 313 SYLYKIYRF--------------ENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVN 355
+ + + + D+LS + L+ D +
Sbjct: 1347 NDVLRGGEGDDYLDGGDGNDTLDGGSGDDTLIGGAGNDYLSGGAGRDTLQGGDGNDTLLG 1406
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L + L G + Y F +G+D+ D+Y
Sbjct: 1407 GAGDDFLAGGKGNDRLDGGTGTNS-------YLFARGDGQDVIVDAYE 1447
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 34/89 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G TI +S+ G +G+D + G + ++V GND G G D+
Sbjct: 1132 VFGTIAGDTIDALAGNDSIHGLAGDDQLSGGAGDDVLMGDDGNDTLIGGIGNDSLIGGRG 1191
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
S Y ++ +A + L V
Sbjct: 1192 SDTYLFEIGHGNDVIDNAAQSAGTKLDRV 1220
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 9/117 (7%)
Query: 271 VVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------- 322
V+ +GND + G N +N+ + GND DG G D A +Y +
Sbjct: 306 VIAGNGNDTLYGTNYSNDELYGGKGNDYLDGREGADRMLGGAGDDIYVVDDEGDVVIEQA 365
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQD 378
+ + +VE LR + + + + + + G+D
Sbjct: 366 GEGVDLVRSSVTHTLGENVENLRLTGEGNIDGSGNSLDNEITGNSGNNFIRGGGGED 422
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G G+D+++G + N++ +GND +G++G DT + Y VY A
Sbjct: 2578 VAGVGGDDLLVGTAGNDILLGGAGNDTLNGAAGNDTLIGGSGDDTY----------VYTA 2627
Query: 331 NEHKQDFLSDVERLRFADQ 349
+ + + + L FA
Sbjct: 2628 GQDVIEEIGGADTLVFAGG 2646
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG++GND+++G + N+ ++GND G SG DT+ Y A + + + ++
Sbjct: 2585 DLLVGTAGNDILLGGAGNDTLNGAAGNDTLIGGSGDDTYVYTAGQDVIEEIGGADTLVFA 2644
Query: 329 DANEHKQ 335
Q
Sbjct: 2645 GGITFNQ 2651
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 3/141 (2%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
K M + + + G + +D++ G N+ + ++GND G G DT + +
Sbjct: 1282 IKGMVLQAGEGNDVIQGYASDDLLSGLEGNDQLYGNAGNDTLLGGDGHDTLDGGTGNDVL 1341
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ N ++ + D + L + L A + L G
Sbjct: 1342 -LGDTGNDVLRGGEGDDYLDGGDGNDTLDGGSGDDTLIGGAGNDYLSGGAGRDTLQGGDG 1400
Query: 377 QD--VFESMKHFYEFGLSEGR 395
D + + F G R
Sbjct: 1401 NDTLLGGAGDDFLAGGKGNDR 1421
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 8/148 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+Y G+D L + + DL S +GG + + Q +++ G
Sbjct: 1997 GGGGFDELYGGAGNDTLQGHGLLDGGDGDDLLEGSGELLGGVGNDTLLGQG--FDTLRGG 2054
Query: 275 SGNDVVIGNS-----ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+G+DV+ S +N+ +GND GS G DT+ + + + Y
Sbjct: 2055 AGDDVLETYSNAWDQGSNILEGGTGNDTLYGSFGDDTYIFNLG-DGHDLLIERRPGEAYS 2113
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVK 357
E D LS + D
Sbjct: 2114 NIEPSTDTLSFGAGIAAGDLGFVRRGND 2141
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 13/146 (8%)
Query: 236 IGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGS------SGNDVVIGNSANNV 288
+ G L + + + G + I + + G SGND++IG + N++
Sbjct: 2380 LAGYDGRDLLRGLAGNDTLFGMGGDDRIEGGDGNDYLSGGNGQHNGSGNDLLIGGAGNDI 2439
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---AIIVYDANEHKQDFLSDVERLR 345
G+D G +G D ++Y A + + + D + F D + L
Sbjct: 2440 LAGEDGDDTLIGGAGDDAYYYRANGGVDIVDNSGGGFDGVFFLDVPRSRLSFHRDGDDLV 2499
Query: 346 F---ADQCIDSVNVKQRSILEYTASY 368
+D +Y Y
Sbjct: 2500 ILVDSDLGQQVRVTNHFLGSDYAIDY 2525
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A TV+ G +G+ +++G+S +++ +GND G++G D A S Y +
Sbjct: 2894 AFGTVL---TGRAGDQIILGSSDDDLIDGGAGNDTLRGNAGNDYLIGGAGSDTYVFAVGD 2950
Query: 323 NAIIV---YDANEHKQDFLS 339
++ + + D LS
Sbjct: 2951 GQDVINNLSNTPDTDTDVLS 2970
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ V +GND + G ++ + SGND+ DG +G D + N ++
Sbjct: 1545 DVVHAGAGNDSIYGGDGSDRLYAGSGNDLIDGGTGDDLIDAGEGDDVLH-GGSGNDTLLG 1603
Query: 329 DANEHKQDFLSDVERL 344
A D + +RL
Sbjct: 1604 GAGADVLDGGTGDDRL 1619
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 33/123 (26%), Gaps = 10/123 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFE 322
+ + S +D++ ++V +GND G G D + + + L +
Sbjct: 1527 DLIHAYSSDDLIEALGGDDVVHAGAGNDSIYGGDGSDRLYAGSGNDLIDGGTGDDLIDAG 1586
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS----YEDLIQVIGQD 378
V L D Y + + +I G D
Sbjct: 1587 EGDDVLHGGSGNDTLLGGAGADVLDGGTGDDRLEGGSGDDLYRFAVGWGNDFIIDSTGSD 1646
Query: 379 VFE 381
+
Sbjct: 1647 SVQ 1649
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL---------NT 247
G G++ Y Q ++ T+ +GG + G +K+ DL N
Sbjct: 2616 GGSGDDTYVYTAGQDVIEEIGGADTLVFAGGI-TFNQVASGLMKSGNDLILRVNGSTANQ 2674
Query: 248 ESWSSIGGYEKNM--TIAQHT----VIESVVGSSG----------NDVVIGNSANNV-FF 290
+ N+ TIA T E + G+ G +D + G++ ++
Sbjct: 2675 VTLKDFFLGGDNLVETIAFETGGQLTAEQIFGAFGLAVPTPAAAFDDTIQGSTGDDAALD 2734
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
++GND+ G +G D F A + + ++ + N+ D + A
Sbjct: 2735 GTAGNDLLQGGNGGDVLFGDAGNDRLEGGNGDDTLDGGTGNDTLVGGRGDDTYIFAAGGG 2794
Query: 351 IDSVNVKQRSI 361
D ++
Sbjct: 2795 QDVIDNSGGGA 2805
Score = 44.0 bits (102), Expect = 0.086, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 28/166 (16%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS---------------------------A 285
I G+ + + + V G GND + G
Sbjct: 1923 IYGHADDDLVTAQAGNDLVYGQDGNDEIHGGDGADTLYGGDGDDLLDGGTGDDQLDGGWG 1982
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ G+D+ G G D + A + + + + D E + L V
Sbjct: 1983 NDTLQGGEGHDLLIGGGGFDELYGGAGNDTLQGHGLLDGGDGDDLLEGSGELLGGVGNDT 2042
Query: 346 FADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
Q D++ +LE ++ D I + + + FG
Sbjct: 2043 LLGQGFDTLRGGAGDDVLETYSNAWDQGSNILEGGTGNDTLYGSFG 2088
Score = 43.6 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + +++ G++GND +IG S ++ + ++G DV + G DT +
Sbjct: 2589 GTAGNDILLGGAGNDTLNGAAGNDTLIGGSGDDTYVYTAGQDVIEEIGGADTLVFAGGIT 2648
Query: 315 LYKIYRF---ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
++ ++ N + ++ + D ++++ + L
Sbjct: 2649 FNQVASGLMKSGNDLILRVNGSTANQVTLKDFFLGGDNLVETIAFETGGQLT 2700
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 18/74 (24%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF------------- 298
+I G+ + T+ + V G GND + G + + +GND+
Sbjct: 1725 TIYGHADDDTVNAGAGNDLVYGQDGNDEIHGGEGADTLYGGNGNDLLVGGTEDDLLDGGL 1784
Query: 299 -----DGSSGLDTF 307
G +G DT
Sbjct: 1785 GDDSLHGGAGNDTL 1798
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 74/230 (32%), Gaps = 22/230 (9%)
Query: 200 GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS 252
+ + IY + +Y G+D + TL GG N + +
Sbjct: 1720 TTQHDTIYGHADDDTVNAGAGNDLVYGQDGNDEIHGGEGADTLYGGNGNDLLVGGTEDDL 1779
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ G +GND + ++V +GND +G +G D + + A
Sbjct: 1780 LDGGLGDDSL---------HGGAGNDTLQAGGGDDVLDGGTGNDRLEGGAGNDQYHFTAG 1830
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNV-KQRSILEYTASY 368
I + V D L V+ + D + + Q S L A
Sbjct: 1831 WGSDLIIDSAGSDSVQFTGVAPADLLLRRDGVDLVVLNQTTGDQLRIQGQFSSLAGVAGA 1890
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + Q + + EG D +Y + DDL +
Sbjct: 1891 KAIEQFVFDGGTTWDYEAIKLKALEGTGQ--DDIIYGHADDDLVTAQAGN 1938
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 9/118 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYE 257
+LG N+ + + + + D G+ L + N+I I G
Sbjct: 377 THTLGENVENLRLTGEGN------IDGSGNSLDNEITGNSGNNFI--RGGGGEDTIYGGG 428
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI ++ G SGND + G ++ GND G G D
Sbjct: 429 GDDTILGGVEKVNLYGESGNDDLYGGDGDDYLSGGIGNDYISGGDGHDIMDGGEGRDT 486
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G++ D + G + +VF+ G+D G +G D++ + I V
Sbjct: 993 IGTTVGDTLSGINTGSVFYGLGGDDRLYGQAGNDSYHFARGHGNDTILDRGGLDQVVFGE 1052
Query: 332 EHKQDFLSD 340
Q L+
Sbjct: 1053 GIGQGDLTF 1061
>gi|253998953|ref|YP_003051016.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
gi|253985632|gb|ACT50489.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
Length = 1800
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 24/195 (12%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---------IDLNTESWSSI 253
GN+ Y ++ + T + G D + + + +Y I N+ ++S I
Sbjct: 336 GNDTYVVDNAGD----VVTESEDEGTDTIRIAIATKGGSYSLGDHIENGILANSVAFSLI 391
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N ++ + ++ G GND ++G + N+ +G+D DG G DT S
Sbjct: 392 GNDLNN-SLTGNAAANTLDGGIGNDSLLGGAGNDRLLGGTGDDTLDGGVGNDTMDGGEGS 450
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS---------DVERLRFADQC-IDSVNVKQRSILE 363
+Y + + I D + D+E L + + + Q +++
Sbjct: 451 DVYVVNAAGDVIADSGTGVSDIDVVQSTVSYILNEDIENLILSGKGKLSGTGNAQNNLIT 510
Query: 364 YTASYEDLIQVIGQD 378
L G D
Sbjct: 511 GNTGANRLDGGAGDD 525
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 3/151 (1%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEK--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ ++L S+I G I ++ ++ G +GND + GN N+
Sbjct: 869 TYSLSPSQLNLTLTGSSNINGTGNAFGNVINGNSGTNALSGGAGNDTLYGNEGNDSLDGG 928
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+G D G +G DT+ S + + V + Q ++E L +
Sbjct: 929 AGADSLLGGAGDDTYIIDNLSDTIVEFSDQGIDTVKSSLVSYQ-LAYNLENLTLLNTAYS 987
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + T+ + L G D + +
Sbjct: 988 GSGNAANNYITGTSGFNVLSGNDGDDTLDGV 1018
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 18/202 (8%)
Query: 199 KGSLGNNIYKIE--VQQKDSPFIQTIYDS--------GGDDLLDLTLIGGVKNYIDLNTE 248
KG G++ Y++ S + + DS GGDD L L +
Sbjct: 627 KGGKGDDTYQVNLISSGTGSKMVAKLEDSVSEAAAVSGGDDTLTLQGTVSGLSK----AT 682
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G E ++ G++ N+ + GN ANN+ +GND G +G DT +
Sbjct: 683 VLTLATGLEHLDASGTGDTWLNLTGNAANNALTGNDANNILRGLAGNDSLSGGAGADTLY 742
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + D + D E + ++ +
Sbjct: 743 GGLGNDALSGGDGADVFVFDSKLSAANVDTIDDFEV---GVDRLQLDEAIFGKLVAKGLT 799
Query: 368 YEDLIQVIGQDVFESMKHFYEF 389
++L+ V G + + F
Sbjct: 800 SDNLLVVNGNPQAQDANDYLIF 821
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ M+ A + VI VG GND + G + N+ +G+D DG G D+ A
Sbjct: 198 DLQSLFDAMSKAGNDVI---VGGGGNDSIAGGAGNDTLRGGAGDDTLDGGVGADSLAGGA 254
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL 338
LY + ++ ++ + + QD +
Sbjct: 255 GGDLYIVDSIKDKVV--EGKDAGQDTI 279
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 18/133 (13%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-------IESVV 272
T+ G+D +D G ++ + + G ++ + Q TV IE+++
Sbjct: 433 DTLDGGVGNDTMDG-GEGSDVYVVNAAGDVIADSGTGVSDIDVVQSTVSYILNEDIENLI 491
Query: 273 ----------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
G++ N+++ GN+ N +G+D G G DT + +
Sbjct: 492 LSGKGKLSGTGNAQNNLITGNTGANRLDGGAGDDTLYGGLGADTLIGGLGADQLEGGAGN 551
Query: 323 NAIIVYDANEHKQ 335
+ V D +
Sbjct: 552 DTYEVDDIGDTIT 564
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 6/183 (3%)
Query: 203 GNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+++Y + DS + D + L ++N I S G + N
Sbjct: 449 GSDVYVVNAAGDVIADSGTGVSDIDV-VQSTVSYILNEDIENLILSGKGKLSGTGNAQNN 507
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I +T + G +G+D + G + G D +G +G DT+
Sbjct: 508 L-ITGNTGANRLDGGAGDDTLYGGLGADTLIGGLGADQLEGGAGNDTYEVDDIGDTITEL 566
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
E +V + ++ + L D I++ + L L+ G DV
Sbjct: 567 ANEGTDLVKSSIDYTLGDYLENLILTGTDH-INATGNSLSNTLIGNDGNNVLMGGAGVDV 625
Query: 380 FES 382
+
Sbjct: 626 LKG 628
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG +N+ +A I + G+ ++ + GN+ N+ GND DG +G DT A
Sbjct: 1071 GGNVENLILAGSADI-NGTGNELDNQITGNTGKNLLSGGLGNDTLDGVAGADTLKGGAGD 1129
Query: 314 YLYKIYRFENAIIVYDANEHKQ 335
+Y + ++ II + Q
Sbjct: 1130 DVYFVDNIDDVIIEESTSYSSQ 1151
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 10/147 (6%)
Query: 203 GNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----DLNTESWSSIGG 255
+ +Y + G+D ++ IG + DL S G
Sbjct: 524 DDTLYGGLGADTLIGGLGADQLEGGAGNDTYEVDDIGDTITELANEGTDLVKSSIDYTLG 583
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---FYYAP 312
I T + G+S ++ +IGN NNV +G DV G G DT+ +
Sbjct: 584 DYLENLILTGTDHINATGNSLSNTLIGNDGNNVLMGGAGVDVLKGGKGDDTYQVNLISSG 643
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS 339
+ + + E+++ A D L+
Sbjct: 644 TGSKMVAKLEDSVSEAAAVSGGDDTLT 670
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 10/165 (6%)
Query: 202 LGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N++Y + I ++ G+D L N +G N
Sbjct: 1596 AANSLYGNAGDDSVVGGGGIDQLFGGAGNDTLIGAGSLYG------NDGDDHLVGAGINN 1649
Query: 260 MTIAQHTVIESVVGSSGN-DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + G G + ++GN N+ S+G D G + D F A + +
Sbjct: 1650 DLLMGGQGNDYLNGDGGVINTLMGNEGNDTLVGSNGADFMWGGTDADVFLIGAITGGADV 1709
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ D +D ++ + + D + +
Sbjct: 1710 I-GDFNTAELDRIGLSKDAMNGLGNMGTLDTSVFESGDGLVAANT 1753
Score = 41.3 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 54/181 (29%), Gaps = 33/181 (18%)
Query: 226 GGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG D ++ ++ + +I +LN ++ I + G+ N+ ++GN+
Sbjct: 1552 GGTDTVNSSVSYTLGAHIENLN---------LIGSLAI-------NGSGNELNNTLVGNA 1595
Query: 285 ANNVFFESSGN---------DVFDGSSGLDTFFYYA---PSYLYKIYRFENAIIVYDANE 332
A N + ++G+ D G +G DT +
Sbjct: 1596 AANSLYGNAGDDSVVGGGGIDQLFGGAGNDTLIGAGSLYGNDGDDHLVGAGINNDLLMGG 1655
Query: 333 HKQDFLSD----VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D+L+ + L + V + + + + + F
Sbjct: 1656 QGNDYLNGDGGVINTLMGNEGNDTLVGSNGADFMWGGTDADVFLIGAITGGADVIGDFNT 1715
Query: 389 F 389
Sbjct: 1716 A 1716
>gi|85704988|ref|ZP_01036088.1| type I secretion target repeat protein [Roseovarius sp. 217]
gi|85670310|gb|EAQ25171.1| type I secretion target repeat protein [Roseovarius sp. 217]
Length = 1427
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 22/207 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIY-DSGGDDLLDLTLIGG-----VKNYIDLNTES 249
G + G +++ + + D + + G+DL++ +G + + +L +
Sbjct: 152 GTAAPANGTDVFGMTADRYDLTLSDYMVEGTAGNDLINAAYLGDPEGDRIDDTDNLAGTN 211
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ N T+ ++V G GND++ G + N++ +GND G +G DT
Sbjct: 212 DDLVFAGAGNDTVRAGAGNDTVYGEDGNDLLDGGAGNDLLQGGNGNDTLIGGAGADTMIG 271
Query: 310 YAPSYLYKIYRFENAIIVY-------------DANEHKQDFLSDV---ERLRFADQCIDS 353
+ A+ V D D + + L +D S
Sbjct: 272 GVGLDIVDYSTSGAAVTVDLAAGTATGGDATGDVINQGIDGIIGSAYDDTLIGSDASSTS 331
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ++ A + + G D
Sbjct: 332 GTDIYTTYIDGGAGNDFIDGRNGGDSL 358
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 225 SGGDDLLDLTLIGG--VKNYIDLNTESWSS---IGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ G DL+D + G +L+ S+ + N TI ++V+G SG DV
Sbjct: 510 TAGADLIDASYAGDPEGDKIDNLDHSDGSNADSVLAGAGNDTIVAGAGNDTVLGESGADV 569
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ G ++ F + ND G +G D F + + A + +
Sbjct: 570 IFGGEGDDSLFGGAENDTIAGDAGNDHLFGEGGDDRFTLQNGFGADTITGGETDET 625
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D ++ + I L + G ++ + + IE +G D VIG+
Sbjct: 865 DRINFSAISDGL----LINFTAPGTGTITDGTSVTEFSEIERFQMGTGADTVIGSDGVEE 920
Query: 289 FFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFL--- 338
+ G+D G DT F + I A V + Q L
Sbjct: 921 IIGNYGDDSILAGGGNDTIFSGFDNDYVDGGAGDDSILSSSGADTVSGGAGNDQIDLGPG 980
Query: 339 -SDVERLRFADQCIDSVNVKQRSILE 363
+ + L F+D V ++
Sbjct: 981 DGETDLLIFSDGDGADVVSSFEIPID 1006
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 29/89 (32%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
S +DV+ + ++ GND+ + +G D F I E V +
Sbjct: 805 AANGSQDDVIFAGAGSDSIDSGLGNDLINAGAGDDEIFLDGSLQNDTIIGGETEETVSEG 864
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ +SD + F ++
Sbjct: 865 DRINFSAISDGLLINFTAPGTGTITDGTS 893
Score = 40.1 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 59/187 (31%), Gaps = 39/187 (20%)
Query: 199 KGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ + + + ++ + +I GG+D + G +Y+D
Sbjct: 905 MGTGADTVIGSDGVEEIIGNYGDDSILAGGGNDTI---FSGFDNDYVD------------ 949
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---GSSGLDTFFYYAPS 313
G +G+D ++ +S + +GND D G D +
Sbjct: 950 ----------------GGAGDDSILSSSGADTVSGGAGNDQIDLGPGDGETDLLIFSDGD 993
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ FE I D +D L + D + VNV ++ + L
Sbjct: 994 GADVVSSFEIPIDNGDGTFTGRDQL---DVSNLTDAAGNPVNVADVTVGSDGSGNAVLSF 1050
Query: 374 VIGQDVF 380
G+ +
Sbjct: 1051 PNGESIT 1057
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 22/118 (18%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG- 282
D G+ +L G + ++ S SS M I Q I V G++G+DV+
Sbjct: 1041 DGSGNAVLSFPN-GESITLVGVDPASVSSHDALAA-MGIFQPDYI--VQGTAGDDVIDAS 1096
Query: 283 -----------------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
N +V +GNDV G DT F A + + + ++
Sbjct: 1097 YSGDPQGDQIDNADSRNNDNADVIDAGAGNDVIMAGLGADTIFGGAGNDTVSVGQGDS 1154
>gi|254513629|ref|ZP_05125693.1| iron-regulated protein FrpC [Rhodobacteraceae bacterium KLH11]
gi|221532138|gb|EEE35135.1| iron-regulated protein FrpC [Rhodobacteraceae bacterium KLH11]
Length = 2924
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 65/200 (32%), Gaps = 16/200 (8%)
Query: 193 KIYGAPKGSL------GNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+YG + IY K TIY GDD ++ GG N
Sbjct: 2307 YLYGGSGADRIKGGKGNDRIYGEAGSDKLYGESGADTIYGHSGDD----SIYGGSANDKL 2362
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + I G N TI + + ++G SG+D + G + N+ S ND G SG
Sbjct: 2363 YGGDGYDYIEGGSNNDTIKGGSGGDRLIGGSGHDWIEGEAGNDTISGGSNNDRLFGGSGA 2422
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D Y + A E D L + + + + + L
Sbjct: 2423 DILSGYNGNDSLD----GGADDDILRGEAGADTLIGGDGRDYLEGGTGADILDGGVGLLD 2478
Query: 365 TASYEDLIQVIGQDVFESMK 384
A Y + + ++ +
Sbjct: 2479 AAVYLNSAAGVTVNLSTGLH 2498
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 78/264 (29%), Gaps = 39/264 (14%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL----- 202
G D Y ND + S D G + K+YG
Sbjct: 2295 GSDKIYGNDDRDY------LYGGSGADRIKGGKGNDRIYGEAGSDKLYGESGADTIYGHS 2348
Query: 203 -GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
++IY K Y GG + + G I + W I G N T
Sbjct: 2349 GDDSIYGGSANDKLYGGDGYDYIEGGSNNDTIKGGSGGDRLIGGSGHDW--IEGEAGNDT 2406
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDTFFYYAP 312
I+ + + + G SG D++ G + N+ + G D G G D
Sbjct: 2407 ISGGSNNDRLFGGSGADILSGYNGNDSLDGGADDDILRGEAGADTLIGGDGRDYLEGGTG 2466
Query: 313 SY---------LYKIYRFENAIIV-------YDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ +Y A + + + D L+++E + ++ +
Sbjct: 2467 ADILDGGVGLLDAAVYLNSAAGVTVNLSTGLHSGGDATGDVLTNIENIIGSNHGDNLTGD 2526
Query: 357 KQRSILEYTASYEDLIQVIGQDVF 380
++L A + L G D
Sbjct: 2527 DFDNLLGGGAGDDTLAGGNGHDRL 2550
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 3/145 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + +++ G +G+D + GN + + SG D G G D + A
Sbjct: 2272 IEGNSGSDVIRGYDGNDNLKGGNGSDKIYGNDDRDYLYGGSGADRIKGGKGNDRIYGEAG 2331
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S + I + ++ ++ ++L D ++ + + LI
Sbjct: 2332 SDKLYGESGADTIYGHSGDDSIYGGSAN-DKLYGGDGYDYIEGGSNNDTIKGGSGGDRLI 2390
Query: 373 QVIGQDVFESMK--HFYEFGLSEGR 395
G D E G + R
Sbjct: 2391 GGSGHDWIEGEAGNDTISGGSNNDR 2415
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 11/137 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQH 265
+ + + T D G+D + + G LN I G IA
Sbjct: 1956 GDDDISAGTRLVDTFIDGAAGNDTI--SGGSGADQ---LNGGRGDDQISGGSGTDYIAGG 2010
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + + G G+D+V GN ++ F +G+D G +G DT + A
Sbjct: 2011 TGDDQLFGQDGDDIVQGNDGDDALFGGNGDDWLLGDNGNDTLSGEGGDD----FIQGGAG 2066
Query: 326 IVYDANEHKQDFLSDVE 342
+ D L E
Sbjct: 2067 DDVLKGGYGDDQLLGGE 2083
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 55/183 (30%), Gaps = 10/183 (5%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ +Y E + + ++ G D + L + +T S+ G + N
Sbjct: 2548 DRLYGDEGNDQIDAGEGVDRVWGGAGQDTVQLGAGDDVFHGDDNGDTLGHDSVSGGDGND 2607
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +++ G +GND + G N+ G+D G G D+ + +
Sbjct: 2608 VIYGDLGNDTITGDAGNDYIHGQIGNDSLSGGIGDDAIFGGEGQDSLSGDDGADIL---- 2663
Query: 321 FENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ I + D L + L L + L GQ
Sbjct: 2664 YGGDDIDFLWGGKDHDELHGGTGDDTLNGDLGNDKLFGGFGNDSLVGGEGNDTLNGGAGQ 2723
Query: 378 DVF 380
D
Sbjct: 2724 DSI 2726
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI--ESVVGSSGNDVVIGNS 284
G D L + I+L T + + + I+ T + + G++GND + G S
Sbjct: 1927 GIDTLKF--VDDAAATINLETLNVEVVHSGAGDDDISAGTRLVDTFIDGAAGNDTISGGS 1984
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ G+D G SG D + + +++ + IV + F + +
Sbjct: 1985 GADQLNGGRGDDQISGGSGTD--YIAGGTGDDQLFGQDGDDIVQGNDGDDALFGGNGDDW 2042
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQ 373
D D+++ + + +D+++
Sbjct: 2043 LLGDNGNDTLSGEGGDDFIQGGAGDDVLK 2071
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 12/183 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI--GGVKNYIDLNTESWSSIGGYEKNMT 261
+ + + + GG LLD + ++L+T S G ++
Sbjct: 2450 DTLIGGDGRDYLEGGTGADILDGGVGLLDAAVYLNSAAGVTVNLSTGLHSG-GDATGDVL 2508
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
T IE+++GS+ D + G+ +N+ +G+D G +G D + + I
Sbjct: 2509 ----TNIENIIGSNHGDNLTGDDFDNLLGGGAGDDTLAGGNGHDRLYGDEGNDQ--IDAG 2562
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E V+ L + + D D++ + + + +G D
Sbjct: 2563 EGVDRVWGGAGQDTVQLGAGDDVFHGDDNGDTLGHDS---VSGGDGNDVIYGDLGNDTIT 2619
Query: 382 SMK 384
Sbjct: 2620 GDA 2622
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 29/155 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ + + G GND ++G N+ +G D G SG D Y A
Sbjct: 2681 LHGGTGDDTLNGDLGNDKLFGGFGNDSLVGGEGNDTLNGGAGQDSIYGGSGDDFIIYSAG 2740
Query: 313 SYLYK-----------------------------IYRFENAIIVYDANEHKQDFLSDVER 343
I + I + ++ + S++E
Sbjct: 2741 DDYISAGWDYADTLDLSKYSSNQVKFRADTFDVFIQTPDGEIQLSYQLQYDTGYRSNIEN 2800
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ F+D +D +++ R+I + +D I Q+
Sbjct: 2801 IIFSDTVLDDASIRIRAIDDQATGGDDTIIGTPQN 2835
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 2/133 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ S T Y +GG D L G + I + ++ G + +
Sbjct: 1991 GGRGDDQISGGSGTDYIAGG--TGDDQLFGQDGDDIVQGNDGDDALFGGNGDDWLLGDNG 2048
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G G+D + G + ++V G+D G G D +++ ++ +
Sbjct: 2049 NDTLSGEGGDDFIQGGAGDDVLKGGYGDDQLLGGEGDDALYFWHGDDQLIGGDGDDTFHL 2108
Query: 328 YDANEHKQDFLSD 340
+N+H L
Sbjct: 2109 ARSNDHGTSSLQG 2121
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 8/157 (5%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV--GSSGNDVVIGNSANNVFFE 291
+ G IDL+ + G ++ + V G +GND + G S ++
Sbjct: 1835 SFDGTGSADIDLDDQVLDGAFGDDRANVLQASDHSRKVQISGGAGNDTIWGGSNDDFLAG 1894
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----SDVERLR-- 345
+G D G G D F A + I + + +VE +
Sbjct: 1895 DAGADEIRGFGGNDVLFVDAEDLAAGNVSGDEGIDTLKFVDDAAATINLETLNVEVVHSG 1954
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D I + + ++ A + + G D
Sbjct: 1955 AGDDDISAGTRLVDTFIDGAAGNDTISGGSGADQLNG 1991
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 37/152 (24%)
Query: 204 NNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-------- 250
++IY + +I +D D LDL+ N + +++
Sbjct: 2724 DSIYGGSGDDFIIYSAGDDYISAGWDYA--DTLDLSKYSS--NQVKFRADTFDVFIQTPD 2779
Query: 251 ---------SSIGGYEKNM--TIAQHTVIESV---------VGSSGNDVVIGNSANNVFF 290
GY N+ I TV++ + G+D +IG N+
Sbjct: 2780 GEIQLSYQLQYDTGYRSNIENIIFSDTVLDDASIRIRAIDDQATGGDDTIIGTPQNDAIN 2839
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
GNDV G++G D F + +I ++
Sbjct: 2840 GGQGNDVLIGNNGADQFLFEVGDGSDQITDYD 2871
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 36/175 (20%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ GDD++ D L GG + L ++ G + I + + G G
Sbjct: 2016 LFGQDGDDIVQGNDGDDALFGGNGDDWLLGDNGNDTLSGEGGDDFIQGGAGDDVLKGGYG 2075
Query: 277 NDVVIGNSANNVFF---------ESSGNDV-------------------FDGSSGLDTFF 308
+D ++G ++ + G+D G G DT
Sbjct: 2076 DDQLLGGEGDDALYFWHGDDQLIGGDGDDTFHLARSNDHGTSSLQGWSIIQGGKGFDTLV 2135
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRS 360
A + Y N ++ ++ D+ER+R++D +++ R+
Sbjct: 2136 LNAGGFSNPKYIGNNQWQIFRNKSDGTQYIIDVQDIERIRYSDGSTKTLSTNTRA 2190
>gi|119484709|ref|ZP_01619191.1| Polymorphic membrane protein [Lyngbya sp. PCC 8106]
gi|119457527|gb|EAW38651.1| Polymorphic membrane protein [Lyngbya sp. PCC 8106]
Length = 2103
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 79/216 (36%), Gaps = 39/216 (18%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE---- 248
IYG + +Y E + ++ G+D ++ +YI N+
Sbjct: 1869 YIYGENG---EDRLYGGEGNDR-------LFADDGNDWVNG---NSEADYISGNSGNDTL 1915
Query: 249 ----------SWSSIGGYEKNMT---IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ E N+ I + + + G++G+D + GN +++ F GN
Sbjct: 1916 YGGKGQDTLQGGTDHDSIEGNLAEDWIEGNAGNDHLWGNAGDDTLSGNRDHDILFGGDGN 1975
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDVERLRFADQC 350
D DG++G D F + ++ D ++ +D LS E D+
Sbjct: 1976 DWLDGNAGEDEIFGNFGDDTLDGGEGNDRLLGGDGDDWLVGEEGEDTLSGGE---GNDRF 2032
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
S +L++ ED+I + G +E + F
Sbjct: 2033 FVSEGRGLDVLLDF-EKGEDMIVLDGGLQWEELGIF 2067
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 56/191 (29%), Gaps = 16/191 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
A + + + + F+ T++ G+D++ I N E ++
Sbjct: 1789 AISTNASDRVIGTSADNQMFGFLGEDTLFAGEGNDIV----IANNNNDFLSGDEGNDTLH 1844
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N T+ + + G G D + G + + + GND G D + S
Sbjct: 1845 GGQGNDTLQMGSGQDQGFGDQGEDYIYGENGEDRLYGGEGNDRLFADDGND--WVNGNSE 1902
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I +Y QD L +E A + L
Sbjct: 1903 ADYISGNSGNDTLYGG--KGQDTLQGGTDHD------SIEGNLAEDWIEGNAGNDHLWGN 1954
Query: 375 IGQDVFESMKH 385
G D +
Sbjct: 1955 AGDDTLSGNRD 1965
>gi|170095523|ref|XP_001878982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646286|gb|EDR10532.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1725
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 77/221 (34%), Gaps = 41/221 (18%)
Query: 21 QYWSNYFIRYKPDV-LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE--ETSIHS 77
W N++ P + L +++ + + Q L +WS+ ++ FE E+ +
Sbjct: 343 HRWENFWDNGSPFLKLPFQTITYAFMKGSLIQQRKVVAVLDQWSRYANIKFEHRESLNEA 402
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADV---WRYGIGKGTIL-SHNALHEIGHALG 133
I+ + Y R I D+A + W T + LHEIGH LG
Sbjct: 403 TIRISFEE--RFGSFSYIGRTIESIPRDRATMNLGWLEDTLLFTDVERAVLLHEIGHTLG 460
Query: 134 LMHPG-----------------SYNGG-------YPVYGVDNDYEN-------DSFLTSV 162
L H +YN V G N Y N ++ S+
Sbjct: 461 LSHEHASPALGGQGTLKQEAYENYNNYVIGGADEALVAGAFNAYANFELSNYLETDAGSI 520
Query: 163 MSYFMPQD-SMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
M YFMPQ+ + F D+ + IY P GS
Sbjct: 521 MKYFMPQEMNEESVQFLPNYGLSDMDLAFIMIIYPFPAGST 561
>gi|126738170|ref|ZP_01753891.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126720667|gb|EBA17372.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 1012
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 77/253 (30%), Gaps = 10/253 (3%)
Query: 141 NGGYPVYGVDNDYE--NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV--AVQKIYG 196
+ YGV +D + SV++ + D + A + +Q G
Sbjct: 349 GNSFTSYGVSDDTSITTSTDGNSVVATGSEMNDYTDQDGWFSAQFEDRSSIEFTLQTRDG 408
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
+L ++ V T+ GDD++ D +L+G +
Sbjct: 409 YSGFTLSGSLIDDPVTTPLEQGHDTVMAGDGDDIVYGQGGDDSLMGDEGDDSLDGGGGDD 468
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + T+ +++ G G+D + G ++ GND G G DT
Sbjct: 469 VLEGGTGSDTLIGGAGGDTLSGGDGDDYIEGGLGDDSLTTGLGNDTLIGGEGNDTLRNSE 528
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+++II N+ + + + L D ++ A +
Sbjct: 529 GDDSLVGGAGDDSIIASGGNDTLEG-NAGFDTLIGGDDNDILRGGADADLMYGDADSDTF 587
Query: 372 IQVIGQDVFESMK 384
G
Sbjct: 588 EMTDGFGNDTLEG 600
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 5/136 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ GDD + D +L G+ N + E ++ E + ++
Sbjct: 476 SDTLIGGAGGDTLSGGDGDDYIEGGLGDDSLTTGLGNDTLIGGEGNDTLRNSEGDDSLVG 535
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+S++ S GND + GN+ + ND+ G + D + A S +++
Sbjct: 536 GAGDDSIIASGGNDTLEGNAGFDTLIGGDDNDILRGGADADLMYGDADSDTFEMTDGFGN 595
Query: 325 IIVYDANEHKQDFLSD 340
+ L D
Sbjct: 596 DTLEGGEAGVDVDLVD 611
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 11/133 (8%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
T+ G D L G +YI+ S G N T+ +++ S G
Sbjct: 474 TGSDTLIGGAGGDTLSG---GDGDDYIEGGLGDDSLTTGL-GNDTLIGGEGNDTLRNSEG 529
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYD 329
+D ++G + ++ S GND +G++G DT + +Y ++
Sbjct: 530 DDSLVGGAGDDSIIASGGNDTLEGNAGFDTLIGGDDNDILRGGADADLMYGDADSDTFEM 589
Query: 330 ANEHKQDFLSDVE 342
+ D L E
Sbjct: 590 TDGFGNDTLEGGE 602
Score = 41.3 bits (95), Expect = 0.58, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 23/143 (16%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG--SSGLDTFFYYA 311
G + + + T + + G+D V G +++ GNDV G G D +
Sbjct: 172 YGSDDDDQMGGSTSDDYIDAGGGSDTVAGQEGHDIIDAGEGNDVIYGDMGDGFDQGVDAS 231
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
P L L +++ + + N S + A +
Sbjct: 232 PLSL---------------------ELGNLQSVSHDGDLGSAGNFAVFSNVATLADGTQI 270
Query: 372 IQVIGQDVFESMKHFYEFGLSEG 394
+ + + EFG +EG
Sbjct: 271 SGRLVLVEKSNPDMWVEFGYTEG 293
Score = 37.4 bits (85), Expect = 8.3, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 19/129 (14%)
Query: 276 GNDVVIGNSANNVFFESSGNDVF------------------DGSSGLDTFFYYAPSYLYK 317
G+D V+ +++ + G+D +G +G DT A
Sbjct: 430 GHDTVMAGDGDDIVYGQGGDDSLMGDEGDDSLDGGGGDDVLEGGTGSDTLIGGAGGDTLS 489
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ I ++ L + + L + N + L A + +I G
Sbjct: 490 GGDGDDYIEGGLGDDSLTTGLGN-DTLIGGEGNDTLRNSEGDDSLVGGAGDDSIIASGGN 548
Query: 378 DVFESMKHF 386
D E F
Sbjct: 549 DTLEGNAGF 557
>gi|254425455|ref|ZP_05039172.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196187878|gb|EDX82843.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 738
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 63/201 (31%), Gaps = 12/201 (5%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D + V Y P GS Y + T + + G+D L IGG I
Sbjct: 474 FDDLIVGAPYADPNGSGSGESYVVFGAADIDSNTSTRFGTNGNDTL----IGGKNKDILF 529
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + T+ +++ G +GND +IG + N+ GND DG G D
Sbjct: 530 GLAGNDFLDGSNGDDTLDGGRGRDTLFGGNGNDTLIGRADNDTLDGGKGNDTLDGGKGND 589
Query: 306 TFFYYAPSY--------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
T I R +N + D + L +
Sbjct: 590 TLDGGRGRDVLFGGNGNDTLIGRADNDTLDGGKGNDLLDGGRGNDLLTGGSGRDFLLGND 649
Query: 358 QRSILEYTASYEDLIQVIGQD 378
+ + + L G+D
Sbjct: 650 GDDTIVGGGNNDTLTGGNGRD 670
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 6/164 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G+D LD L GG N + ++ G + N +
Sbjct: 570 NDTLDGGKGNDTLDGGKGNDTLDGGRGRDVLFGGNGNDTLIGRADNDTLDGGKGNDLLDG 629
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G SG D ++GN ++ ND G +G DTF + + I F+
Sbjct: 630 GRGNDLLTGGSGRDFLLGNDGDDTIVGGGNNDTLTGGNGRDTFVLSLGNGIDTITDFDTK 689
Query: 325 IIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTAS 367
++ LS + + +D + +S
Sbjct: 690 DLIGLTGGLSLGALSFIGSDILISDTSEVLATLTGIDTTSLNSS 733
>gi|332705377|ref|ZP_08425455.1| hypothetical protein LYNGBM3L_07490 [Lyngbya majuscula 3L]
gi|332355737|gb|EGJ35199.1| hypothetical protein LYNGBM3L_07490 [Lyngbya majuscula 3L]
Length = 1104
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 12/150 (8%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNT--ESWSSIGGYEKNMTIAQHTVIESVV 272
+TI G+D + + T+ GG + + L S SS + I + +
Sbjct: 924 ETIIARAGNDTVAGALGNDTIFGGNGDDV-LRGDFNSRSSDNTLGGDDVIYGGAGSDRIG 982
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK----IYRFENAIIVY 328
G +GND + G ++ + +G+D+ G G DT F S I
Sbjct: 983 GKAGNDSLFGQKGDDQIWGDAGDDLLRGGLGNDTLFGDNGSGGDGSDTFILAAGEGTDTI 1042
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ +DF+ + L F + +
Sbjct: 1043 GDFQVSEDFIGLADGLTFGQLSVTQESNNA 1072
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 2/128 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG+ ++ +I + N+ + GND G +G D S + +I
Sbjct: 915 DELVGTEADETIIARAGNDTVAGALGNDTIFGGNGDDVLRGDFNSRSSDNTLGGDDVIYG 974
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
A + + + L +L + L G S
Sbjct: 975 GAGSDRIGGKAGNDSLFGQKGDDQIWGDAGDDLLRGGLGNDTLFGDNGSGGDGSDTFILA 1034
Query: 389 FGLSEGRD 396
G EG D
Sbjct: 1035 AG--EGTD 1040
>gi|332208020|ref|XP_003253093.1| PREDICTED: matrilysin-like [Nomascus leucogenys]
Length = 270
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 69/214 (32%), Gaps = 48/214 (22%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W++ + Y+ T S + L AL W
Sbjct: 87 KPRCGVPDVAEYSLFPNRPKWTSKVVTYRIVSYTRDLPSITVDRL-------VSKALNMW 139
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F +DI + + + +D + +FD+ +
Sbjct: 140 GKEIPLHFRRVVRGTADIMIGFARGAHGDSYPFDGPGNILAHAFAPGTGLGGDAHFDEDE 199
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W G G + A HE+GH+LG+ H N VM Y P
Sbjct: 200 RWTDGNSLGINFLYAATHELGHSLGMGHSSDPNA-------------------VM-Y--P 237
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
D + DI +QK+YG S
Sbjct: 238 TYGNGDPQHFKLSQ---DDIKGIQKLYGKRSNSR 268
>gi|320104771|ref|YP_004180362.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
gi|319752053|gb|ADV63813.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
Length = 1881
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 11/182 (6%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
++ G+D + +GG N L S+ G + I +++ G +GND
Sbjct: 307 DSLVGGAGNDTI----LGGAGNDTILGGAGNDSLFGGDGEDLIEGGDGHDNIEGGAGNDT 362
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
V G++ ++ F +G+D+ G +G D+ + + + V +
Sbjct: 363 VFGDAGDDTIFGDAGDDLIYGGAGTDSIEGGSGND---VLDAGQPGTVRENTNDTLIGGD 419
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGRDI 397
+ L +D + ++ + + G D E F G EG D
Sbjct: 420 GNDTLFGSDGANSLLGGDGNDLIFGFGGDDLVDGGRGNDSIEGGDGADFLRGG--EGDDT 477
Query: 398 TF 399
F
Sbjct: 478 VF 479
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 9/169 (5%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSS 275
T+ G+D + GG+ N DL + G N TI + + G
Sbjct: 599 GNNTLLGGEGNDTI----FGGLGN--DLIDGGSGDDFLDGVAGNNTIFGGDGNDLIFGGV 652
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G + ++ +G+D +G SG D+ + N ++ + N+
Sbjct: 653 GNDSIDGGAGDDTIDGGAGDDSIEGGSGDDSIDGGSGDDQIDDLEGNNTLLGGEGNDTIF 712
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L + + + V + + + + +G D +
Sbjct: 713 GGLGN-DLIDGGSGDDFLDGVAGNNTIFGGDGNDLIFGGVGNDSIDGGA 760
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 58/178 (32%), Gaps = 15/178 (8%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T++ G D L D + G DL +S + I G + N T+ +
Sbjct: 1244 GGNGNDTLWGGLGSDTLFGRGGDDLIFGFQPG--DLGDDSPNLIHGDDGNDTLVGSDGRD 1301
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +GND + G ++ ++G+D+ +G +G D R
Sbjct: 1302 TIRGGAGNDTIEGLGGDDSLEGNAGDDLIEGGAGNDLIEGGDGDD-----RLYGHTTTSA 1356
Query: 330 ANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L + L +D L + ++ G D
Sbjct: 1357 GDPDQSDTLIGSDGNDLLAGSDGPDLLDGGAGDDALFGNGGNDTIVGGNGNDSISGGA 1414
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 60/190 (31%), Gaps = 16/190 (8%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDL------------TLIGGVKNYIDLNTE 248
+ I+ +I G+D+LD TLIGG N ++
Sbjct: 369 DDTIFGDAGDDLIYGGAGTDSIEGGSGNDVLDAGQPGTVRENTNDTLIGGDGNDTLFGSD 428
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+S+ G + N I + V G GND + G + G+D G +G DT F
Sbjct: 429 GANSLLGGDGNDLIFGFGGDDLVDGGRGNDSIEGGDGADFLRGGEGDDTVFGGAGNDTIF 488
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + + D + L D ++E A
Sbjct: 489 GGLGNDSLEGGAGNDVLDAVDEFSDGTPDEMN--TLIGGDGNDSLFGSLGDDLMEGGAGE 546
Query: 369 EDLIQVIGQD 378
+ L G D
Sbjct: 547 DFLDAYEGDD 556
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 8/119 (6%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSS 275
T+ G+D + GG+ N DL + G N TI + + G
Sbjct: 698 GNNTLLGGEGNDTI----FGGLGN--DLIDGGSGDDFLDGVAGNNTIFGGDGNDLIFGGV 751
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND + G + ++ +G+DV G G D+ L ++ + N +
Sbjct: 752 GNDSIDGGAGDDTIDGGAGDDVLFGGPGNDSILGGEGDDLIHTSSPDDPGSPEEVNTAR 810
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
GG N L + I G + ++ ++++G +GND ++G + N+ F G
Sbjct: 282 FTGGRGNDTILGGSGGNFIDGGSGDDSLVGGAGNDTILGGAGNDTILGGAGNDSLFGGDG 341
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
D+ +G G D A + + I DA +
Sbjct: 342 EDLIEGGDGHDNIEGGAGNDTV-FGDAGDDTIFGDAGDD 379
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 227 GDDLLDLTLIGG--VKNYIDLNTESWSS----------IGGYEKNMTIAQHTVIESVVGS 274
G DL+D++ + G + L+ + I G + I ++++G
Sbjct: 119 GRDLIDVSRVTGLSSNAVVVLDGGQDADTILGGLAAERILGGSGDDVILGGDGDDTILGG 178
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D + G ++ +GND G +G DT + S ++ + DAN+
Sbjct: 179 SGDDSIEGGDGHDYIEGGTGNDTILGGAGNDTIYGGDDSDTILGGSGDDFLDGGDANDSI 238
Query: 335 QDFLSDVERLRFADQCIDSVNVKQ 358
D + A +
Sbjct: 239 DGDAGDDTIVAIAGNNTIEGGLGN 262
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N TI + + G SG+D ++G + N+ +GND G +G D+ F
Sbjct: 282 FTGGRGNDTILGGSGGNFIDGGSGDDSLVGGAGNDTILGGAGNDTILGGAGNDSLFGGDG 341
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
L I + + + F + F D D + + S D++
Sbjct: 342 EDL--IEGGDGHDNIEGGAGNDTVFGDAGDDTIFGDAGDDLIYGGAGTDSIEGGSGNDVL 399
Query: 373 QV 374
Sbjct: 400 DA 401
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 1/145 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + +S+ G SG+D + NN GND G G D +
Sbjct: 569 GGAGNDSIEGGSGDDSIDGGSGDDQIDDLEGNNTLLGGEGNDTIFGGLGNDLIDGGSGDD 628
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N I D N+ + + + + +E + + +
Sbjct: 629 FLDGVAGNNTIFGGDGNDLIFGGVGN-DSIDGGAGDDTIDGGAGDDSIEGGSGDDSIDGG 687
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF 399
G D + ++ EG D F
Sbjct: 688 SGDDQIDDLEGNNTLLGGEGNDTIF 712
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 61/168 (36%), Gaps = 15/168 (8%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T++ G+D + GG+ N L + + + + + +++G GND
Sbjct: 476 DTVFGGAGNDTI----FGGLGND-SLEGGAGNDVLDAVDEFSDGTPDEMNTLIGGDGNDS 530
Query: 280 VIGNSANNVFFESS---------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ +++ + G+D G G DT A + + +++ I +
Sbjct: 531 LFGSLGDDLMEGGAGEDFLDAYEGDDTLIGGEGNDTLLGGAGNDSIEGGSGDDS-IDGGS 589
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D L L + +++ + + L V G +
Sbjct: 590 GDDQIDDLEGNNTLLGGEGNDTIFGGLGNDLIDGGSGDDFLDGVAGNN 637
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 54/176 (30%), Gaps = 13/176 (7%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ TI G+D + D + + + ++ G N T+ E
Sbjct: 1394 GNGGNDTIVGGNGNDSISGGAGDDLIYTVAPDDPGI-PGEINAARGDAGNDTLIGGASDE 1452
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFE 322
+ G +G+D + G + ++V F GND G G D +P
Sbjct: 1453 LLDGGAGDDTIDGGAGDDVLFGGPGNDSILGGEGDDLIHTSSPDDPGSPEEVNTARGGEG 1512
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N IV D + L D +++ + L +G D
Sbjct: 1513 NDTIVGSVGRDFLDGGLGQDSLIGGDGDDTIFAGDGDDLVDGGRGNDLLEGGLGND 1568
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 60/191 (31%), Gaps = 12/191 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW 250
G + N I+ + TI S G DL+D +LIGG + +
Sbjct: 917 GPALANESNTIFGGDGDD-------TIIGSNGPDLIDGGLGQDSLIGGDGDDTIFAGDGD 969
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N + + + G G+D V+GN ++ F GND +G G D
Sbjct: 970 DLVDGGRGNDLLEGGLGNDFLRGGEGDDTVLGNFGDDTLFGGLGNDSIEGGPGNDLIRAV 1029
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
E+ I + + + + + L A
Sbjct: 1030 DEFSDGPALANESNTIFGGDGDDTIIGSNGPDLIDGGLGQDSLIGGDGDDTLIGGAGNNT 1089
Query: 371 LIQVIGQDVFE 381
L+ G D E
Sbjct: 1090 LLGGAGNDSIE 1100
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 4/183 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G P L + + + TI+ GDD + + + ID S IGG
Sbjct: 901 GGPGNDLIRAVDEFSDGPALANESNTIFGGDGDDTIIGSN---GPDLIDGGLGQDSLIGG 957
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + TI + V G GND++ G N+ G+D G+ G DT F +
Sbjct: 958 -DGDDTIFAGDGDDLVDGGRGNDLLEGGLGNDFLRGGEGDDTVLGNFGDDTLFGGLGNDS 1016
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + I D ++ + D + +++ + LI
Sbjct: 1017 IEGGPGNDLIRAVDEFSDGPALANESNTIFGGDGDDTIIGSNGPDLIDGGLGQDSLIGGD 1076
Query: 376 GQD 378
G D
Sbjct: 1077 GDD 1079
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 4/140 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G P L + + + TI+ GDD + + + ID S IGG
Sbjct: 1599 GGPGNDLIRAVDEFSDGPALANESNTIFGGDGDDTIIGSN---GPDLIDGGLGQDSLIGG 1655
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + TI + V G GND + G + G+D G +G DT + +
Sbjct: 1656 -DGDDTIFAGDGDDLVDGGRGNDSIEGGEGADFLRGGEGDDTVLGGAGNDTIYGGLGNDS 1714
Query: 316 YKIYRFENAIIVYDANEHKQ 335
+ + + D
Sbjct: 1715 LEGGAGNDVLDAVDEFSDGT 1734
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 59/182 (32%), Gaps = 18/182 (9%)
Query: 220 QTIYDSGGDDLLDLTL----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI GDD LD L + G L +++ G N TI G S
Sbjct: 1178 DTILGGMGDDTLDGGLGEDFLDGGDGEDRLVDPDQATLLGGAGNDTITGAGAPIFADGGS 1237
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D+++G + N+ + G+D G G D F + P L + +
Sbjct: 1238 GDDLIVGGNGNDTLWGGLGSDTLFGRGGDDLIFGFQPGDL------GDDSPNLIHGDDGN 1291
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSE 393
D L +D +E + L G D+ E E G +
Sbjct: 1292 DTLVG------SDGRDTIRGGAGNDTIEGLGGDDSLEGNAGDDLIEGGAGNDLIEGGDGD 1345
Query: 394 GR 395
R
Sbjct: 1346 DR 1347
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 45/127 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + + TI + V G GND++ G N+ G+D G+ G DT F
Sbjct: 835 SLIGGDGDDTIFAGDGDDLVDGGRGNDLLEGGLGNDFLRGGEGDDTVLGNFGDDTLFGGL 894
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + I D ++ + D + +++ + L
Sbjct: 895 GNDSIEGGPGNDLIRAVDEFSDGPALANESNTIFGGDGDDTIIGSNGPDLIDGGLGQDSL 954
Query: 372 IQVIGQD 378
I G D
Sbjct: 955 IGGDGDD 961
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 45/127 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + + TI + V G GND++ G N+ G+D G+ G DT F
Sbjct: 1533 SLIGGDGDDTIFAGDGDDLVDGGRGNDLLEGGLGNDFLRGGEGDDTVLGNFGDDTLFGGL 1592
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + I D ++ + D + +++ + L
Sbjct: 1593 GNDSIEGGPGNDLIRAVDEFSDGPALANESNTIFGGDGDDTIIGSNGPDLIDGGLGQDSL 1652
Query: 372 IQVIGQD 378
I G D
Sbjct: 1653 IGGDGDD 1659
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 11/116 (9%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ IY ++ G+D+LD + + + E S+ G +
Sbjct: 1704 DTIYG-------GLGNDSLEGGAGNDVLDAVDEFSDGTPDEMNTLIGGEGNDSLFGSQGG 1756
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + G+D +IG N+ +G+D DG GLD A +
Sbjct: 1757 DLMEGGAGEDFLDAYEGDDTLIGGDGNDTLLGGNGDDALDGGPGLDEVNGNAGDDI 1812
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 61/220 (27%), Gaps = 52/220 (23%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G P L + + + TI+ GDD + G
Sbjct: 1019 GGPGNDLIRAVDEFSDGPALANESNTIFGGDGDDTI----------------------IG 1056
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV------------------ 297
I +S++G G+D +IG + NN +GND
Sbjct: 1057 SNGPDLIDGGLGQDSLIGGDGDDTLIGGAGNNTLLGGAGNDSIEGGDGDDSIDGGSGDDF 1116
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
DG +G +T F I + D +R+ D
Sbjct: 1117 LDGVAGNNTIFGGDGDD----------TIFGGDGDDSIDGGMGNDRVEGGDGDDLIDGGD 1166
Query: 358 QRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGR 395
+ + ++ +G D + + F + G E R
Sbjct: 1167 GNDTIFGGMGRDTILGGMGDDTLDGGLGEDFLDGGDGEDR 1206
>gi|260221989|emb|CBA31104.1| hypothetical protein Csp_C26880 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 499
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 10/155 (6%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + L T S + G N T+ + ++G +GND + G A + +GN
Sbjct: 176 YDGTTSTWQLRTGSI--LDGGTGNDTLTGGAGRDYLMGGNGNDTLNGGDAADTLEGGAGN 233
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFEN--------AIIVYDANEHKQDFLSDVERLRFA 347
DV +G +G D A + ++ IV A D +
Sbjct: 234 DVLNGGTGNDLLIGGAGTDTLTGGVGDDFYRLSDTLDTIVEAAGSGTDTVQLDSTYVSTN 293
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ +++ Y +L + E
Sbjct: 294 LSTTYVLATNLENLVAYDGGAINLTGNASANRLEG 328
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G +G++ Y++ G D + L N + ++ E
Sbjct: 255 TGGVGDDFYRLSDTLDTIVEA----AGSGTDTVQLDSTYVSTNL----STTYVLATNLEN 306
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + ++ G++ + + GNSA N GND G G D S +
Sbjct: 307 LVAYDGGAI--NLTGNASANRLEGNSAANTISGLDGNDFIVGGKGNDILTGGTGSDTFAW 364
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ A +H DF
Sbjct: 365 RLNDGGTAGSPAVDHVTDFNYG 386
>gi|297690079|ref|XP_002822454.1| PREDICTED: collagenase 3-like isoform 3 [Pongo abelii]
Length = 489
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHNGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|194207129|ref|XP_001495153.2| PREDICTED: matrix metalloproteinase 14 [Equus caballus]
Length = 756
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 316 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 375
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 376 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 435
Query: 149 VDNDYEN 155
D EN
Sbjct: 436 QWMDTEN 442
>gi|149913478|ref|ZP_01902011.1| type I secretion target repeat protein [Roseobacter sp. AzwK-3b]
gi|149812598|gb|EDM72427.1| type I secretion target repeat protein [Roseobacter sp. AzwK-3b]
Length = 2341
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 82/292 (28%), Gaps = 38/292 (13%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + T + D +D G G T+ +I A+G
Sbjct: 1766 GGAGNDTLDGGADNDAVTGGAGDDSL--LGGDGSDTLAGGEGNDTLDGGAGDDDI--AVG 1821
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G V+ +D N + ++ D + G DI+ +
Sbjct: 1822 GGDSAVGGAGDDVFRLDPTDTNPNTQITI----DGGTDGTDGAPGGPENGDAGDILDLSD 1877
Query: 194 IYGA--------PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG------- 238
G P+ + N + I+ + G+D LD + G
Sbjct: 1878 ATGPLDVVFGTNPETGIVNGVDGDVFPDVSFSEIEQVVTGAGNDTLDASTSNGPINVATG 1937
Query: 239 ----------VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ ID + S + G + TI ++V G D V+G + +V
Sbjct: 1938 AGDDEVLGGAGNDVIDAGDGADS-VDGGAGDDTIGAGLGNDTVNAGDGADDVLGGAGEDV 1996
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+GND DG D+ A A A D L
Sbjct: 1997 LDGGAGNDTLDGGDDNDSLTGGAGDDSL----LGGAGEDTLAGGEGADVLDG 2044
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 63/189 (33%), Gaps = 15/189 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I T++ G+DLL GG N + L + G + + ++ + + G
Sbjct: 934 GGAGIDTLFGGDGNDLL----AGGFDNDVLLGDAGNDDLRGEDGDDFLSGGIGDDFLEGG 989
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND + G+ N+ +G+D G G DT + E++ ++ +
Sbjct: 990 NGNDTLNGDEGNDDLRGEAGDDQLFGGDGNDTLAGGTGADSLVGGAGEDSFVLGADDTAG 1049
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L D + + E + D + + G +
Sbjct: 1050 GGDGDD---LFLVDPTLPTGGDATIVGGETGETNGDTLDLRGVGPVTLVYDT-------- 1098
Query: 395 RDITFDSYL 403
D TFD
Sbjct: 1099 TDPTFDPAT 1107
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 72/240 (30%), Gaps = 17/240 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGD----DLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ G + + D G D +G D+ TE+ +I G
Sbjct: 740 ATRGTVTFGDGSTLTFEGIETILRDPDGVVDGADTSQAMPVGFTDAQGDVITENADTIFG 799
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI+ + V G GNDV+ G N+ GND G +G D F +
Sbjct: 800 NGGDDTISSGGGDDFVAGGIGNDVIDGGLGNDNLNGDDGNDSLSGDAGNDQLFGGSGFDA 859
Query: 316 YKIYRFENAII-----VYDANEHKQDFLSDVERLRFADQCIDS---VNVKQRSILEYTAS 367
++ + + D L + F I +
Sbjct: 860 LSGGDGDDLLAGGLDNDTLFGDAGNDDLRGEDGDDFLSGGIGDDFLEGGTGNDNVNGDDG 919
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT---FDSYLYL--GSYDDLRNVFGSDRGAA 422
+DL G D +G D+ FD+ + L DDLR G D +
Sbjct: 920 NDDLRGEAGDDQLFGGAGIDTLFGGDGNDLLAGGFDNDVLLGDAGNDDLRGEDGDDFLSG 979
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 63/204 (30%), Gaps = 13/204 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ ++ GDD + D + GG N + + G
Sbjct: 1495 DGADGDNDVIDAGAGNDSVAAGLGDDTVTAGTGDDVVDGGAGNDVISGDAGNDDLAGAAG 1554
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I+ T + +VG G+D + G+ N++ F GND +G G D+ A + +
Sbjct: 1555 NDQISGGTGDDFIVGELGDDSLFGDEGNDILFGGDGNDSLEGGDGADSLAGNAGAD--TL 1612
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ + + F ++ ++ + D G
Sbjct: 1613 LGGDGDDVIAVGGRDVATGGAGDDVFIFD---TTDPEPNVQATIDGGSDATD--GAPGGP 1667
Query: 379 VFESMKHFYEFGLSEG-RDITFDS 401
+ G D+ FD
Sbjct: 1668 ENGDAGDILDLSAVTGPLDVVFDP 1691
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 56/188 (29%), Gaps = 13/188 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQ 264
Q + GDDLL D + G DL E + G + +
Sbjct: 848 NDQLFGGSGFDALSGGDGDDLLAGGLDNDTLFGDAGNDDLRGEDGDDFLSGGIGDDFLEG 907
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T ++V G GND + G + ++ F +G D G G D + + +
Sbjct: 908 GTGNDNVNGDDGNDDLRGEAGDDQLFGGAGIDTLFGGDGNDLLAGGFDNDVLLGDAGNDD 967
Query: 325 IIVYDANEH-----KQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ D ++ DFL + L + D L + L G
Sbjct: 968 LRGEDGDDFLSGGIGDDFLEGGNGNDTLNGDEGNDDLRGEAGDDQLFGGDGNDTLAGGTG 1027
Query: 377 QDVFESMK 384
D
Sbjct: 1028 ADSLVGGA 1035
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 75/225 (33%), Gaps = 30/225 (13%)
Query: 219 IQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWS--------SIGGYEKNMTIAQ 264
TI+ +GGDD + D G + ID + + S+ G N +
Sbjct: 794 ADTIFGNGGDDTISSGGGDDFVAGGIGNDVIDGGLGNDNLNGDDGNDSLSGDAGNDQLFG 853
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +++ G G+D++ G N+ F +GND G G D + +
Sbjct: 854 GSGFDALSGGDGDDLLAGGLDNDTLFGDAGNDDLRGEDGDDFLSGGIGDDFLEGGTGNDN 913
Query: 325 IIVYDANEH-----KQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ D N+ D L + ++ L D +L A +DL G
Sbjct: 914 VNGDDGNDDLRGEAGDDQLFGGAGIDTLFGGDGNDLLAGGFDNDVLLGDAGNDDLRGEDG 973
Query: 377 QDVFES--MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
D F E G D+ DDLR G D+
Sbjct: 974 DDFLSGGIGDDFLEGGNGN------DTLNGDEGNDDLRGEAGDDQ 1012
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 74/263 (28%), Gaps = 41/263 (15%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM---VSDIVAVQKIYGA 197
G V+ D + ++ D DA+ G P DI+ + + G
Sbjct: 1632 GAGDDVFIFDTTDPEPNVQATI-------DGGSDATDGAPGGPENGDAGDILDLSAVTGP 1684
Query: 198 --------PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG------VKNYI 243
P+ + + I+ + G+D LD + G
Sbjct: 1685 LDVVFDPNPESGAVDGLDGDVFPDLAFSEIEQVITGAGNDTLDASTSTGPVDIEAGAGDD 1744
Query: 244 DLNTESWSS----------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ + + + G N T+ ++V G +G+D ++G ++
Sbjct: 1745 SVTAGAGNDSVLGDAGNDVLDGGAGNDTLDGGADNDAVTGGAGDDSLLGGDGSDTLAGGE 1804
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND DG +G D + + + D + + ++ +
Sbjct: 1805 GNDTLDGGAGDDDIAVGGGDS--AVGGAGDDVFRLDPTDTNPNT-----QITIDGGTDGT 1857
Query: 354 VNVKQRSILEYTASYEDLIQVIG 376
DL G
Sbjct: 1858 DGAPGGPENGDAGDILDLSDATG 1880
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 51/156 (32%), Gaps = 4/156 (2%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D +G D T+ +I N TIA +SV +G+D V +
Sbjct: 1144 DGTPSGDNIPVGFTDAQGDQVTDGADTILAGAGNDTIAAGGGDDSVDAGTGDDFVDAGAG 1203
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ GND G + DT A ++ I D N D L E
Sbjct: 1204 ADSVDGGDGNDDLRGGTDNDTILGGAGDDFIDGDAGDDQIFAGDGN----DDLRGSEGED 1259
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
F D + N+ + +D+ + G +
Sbjct: 1260 FIDGGAGNDNILGEEDNDDLRGGDDVDMLFGGTGDD 1295
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 10/180 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ + GDD L + + ID I N ++A ++V +G+DVV
Sbjct: 1473 VDGTAGDDALPIGFTDAQGDQIDGADGDNDVIDAGAGNDSVAAGLGDDTVTAGTGDDVVD 1532
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + N+V +GND G++G D + + + + D
Sbjct: 1533 GGAGNDVISGDAGNDDLAGAAGNDQISGGTG-DDFIVGELGDDSLFGD---------EGN 1582
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ L D L A + L+ G DV G + FD+
Sbjct: 1583 DILFGGDGNDSLEGGDGADSLAGNAGADTLLGGDGDDVIAVGGRDVATGGAGDDVFIFDT 1642
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 19/195 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ G+D L + +++ID + +I G E N + ++ + G +G+D +
Sbjct: 1243 IFAGDGNDDLRGSE---GEDFIDGGAGND-NILGEEDNDDLRGGDDVDMLFGGTGDDFLD 1298
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G++ +++ F GND GS G D A + + + + + L D
Sbjct: 1299 GDAGDDMVFGGDGNDDMRGSEGNDLLDGGAGNDTLLGEEGSDTLTGGEGADSLDGGLGDD 1358
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL---------- 391
+ A + ++ + D I V+G + E + G
Sbjct: 1359 NLVVGAGDIATGGDGDDVFTVDPMLTGSDPITVVGGETGEDLTDPTNGGAGDVLDLTGLD 1418
Query: 392 -----SEGRDITFDS 401
+ D TFD
Sbjct: 1419 VVSVTYDNTDPTFDP 1433
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N TI T + V G++G+D++ G N+ ND +G +G D
Sbjct: 612 LTANAGNDTITSGTGDDLVYGNAGDDLIYGGDGNDTLRGREDNDTLNGDAGNDNILGEDG 671
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS 339
L + + + + D +
Sbjct: 672 DDLIS----GGTGVDFLSGDAGNDTIV 694
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 58/202 (28%), Gaps = 26/202 (12%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--------------TLIGGVKNYIDLNTE 248
G+ + TI GGDD +D ++ GG N DL
Sbjct: 1161 GDQVTDGADTILAGAGNDTIAAGGGDDSVDAGTGDDFVDAGAGADSVDGGDGND-DLRGG 1219
Query: 249 SWSS----------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ + I G + I + + GS G D + G + N+ ND
Sbjct: 1220 TDNDTILGGAGDDFIDGDAGDDQIFAGDGNDDLRGSEGEDFIDGGAGNDNILGEEDNDDL 1279
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G +D F ++ + D N+ + + L + +
Sbjct: 1280 RGGDDVDMLFGGTGDDFLDGDAGDDMVFGGDGNDDMRGS-EGNDLLDGGAGNDTLLGEEG 1338
Query: 359 RSILEYTASYEDLIQVIGQDVF 380
L + L +G D
Sbjct: 1339 SDTLTGGEGADSLDGGLGDDNL 1360
Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQH--TVIESVVGSSGNDVV 280
+G D+L ++ I +D + + G IA T +S V ++GND +
Sbjct: 96 NGLTDVLVISDINQSLEEVDFIYGVYPDQVVDGTNDGDLIAVGQFTDSDSDVVTAGNDTI 155
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+GN ++ F S GND+ +G +G D +
Sbjct: 156 LGNGGDDQIFASDGNDLAEGGTGQDFVAGEGGNDT 190
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
I++ + ++ ND + G + ++ G D G G DT F +++ FE
Sbjct: 380 IDAALEATSNDGLDGGAGEDLLVGGVGGDNIVGGDGNDTIFGDNGDSGTRVFGFET 435
>gi|302187584|ref|ZP_07264257.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. syringae 642]
Length = 1588
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 47/134 (35%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 305 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 364
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G S +++ +G D G +G DTF + +
Sbjct: 365 TEGNDVITGGAAHELIFGLTGKDTLNGGSGDDILVGGAGADKLTGGAGADTFRFDQLTDS 424
Query: 316 YKIYRFENAIIVYD 329
Y+ +V D
Sbjct: 425 YRTATTSATDLVTD 438
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D + L + LNT + + GG + + T E+++GS D + GN
Sbjct: 1397 DGNDTVSYQLAT-AGVTVALNTSAQQATGG--SGLDTLKGT--ENLIGSQFADTLTGNKN 1451
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
N +GND G +G D + + + + ++ L D+
Sbjct: 1452 ANTLSGGAGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISDTGMGELRDI 1507
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N+ T E+ G+ GND ++G ++ +G D+ +G +G D + A +
Sbjct: 764 VGNVAPGILTGTENAEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRDALYGGADA 823
Query: 314 YLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ ++ YDA D + D
Sbjct: 824 DTFVYSALTDSYRDYDAGGLTATDTIYDF 852
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 63/187 (33%), Gaps = 27/187 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDS--GGDDLLDLTLIGGVKNYIDLNTESWSSI 253
GA + G+ V ++T D+ GG D + +L +
Sbjct: 1312 GADMLTGGDGSDSYYVDDAADRVVETNADAQVGGVDTVYSSLASYT-------------L 1358
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G +N+ I SSG IGN+ +NV + + ++V DG G DT Y +
Sbjct: 1359 GANLENIVI----------NSSGAANAIGNALDNVIYAGASDNVMDGRDGNDTVSYQLAT 1408
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ +A + D L E L + K + L A + L
Sbjct: 1409 AGVTVALNTSAQQATGGS--GLDTLKGTENLIGSQFADTLTGNKNANTLSGGAGNDTLSG 1466
Query: 374 VIGQDVF 380
G DV
Sbjct: 1467 GAGDDVL 1473
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 11/143 (7%)
Query: 195 YGAPKGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLTLIGGVK-NYIDLNTESW 250
Y S + + ++ Q S T SG L+++ + YI
Sbjct: 425 YRTATTSATDLVTDFDISQDRIDLSNLGFTGLGSGKAGTLNISYNATLDRTYIKSLDADA 484
Query: 251 SS------IGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S + G K+ A H + VV G++G D + G N+V ++G D DG +G
Sbjct: 485 SGNRFELGLSGNLKDTLNASHFTFQRVVEGTAGGDTLTGTDGNDVLNGNAGTDRIDGGAG 544
Query: 304 LDTFFYYAPSYLYKIYRFENAII 326
DT A + + I
Sbjct: 545 ADTITGGADADTLTGGAGADLFI 567
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 1205 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 1264
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFES 382
+ +++E L + +++ AS L G D+
Sbjct: 1265 VSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTG 1318
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 71/196 (36%), Gaps = 13/196 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ ++ Q D G D D+ ++ + + + +S S +
Sbjct: 1204 GHIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDT 1263
Query: 256 YEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ +E+ + +GN +V+IGN++NN+ ++G D+ G G D
Sbjct: 1264 VVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSD 1323
Query: 306 TFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+++ + + + ++ +++E + + +
Sbjct: 1324 SYYVDDAADRVVETNADAQVGGVDTVYSSLASYTLGANLENIVINSSGAANAIGNALDNV 1383
Query: 363 EYTASYEDLIQVIGQD 378
Y + ++++ +
Sbjct: 1384 IYAGASDNVMDGRDGN 1399
>gi|114706023|ref|ZP_01438926.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Fulvimarina pelagi HTCC2506]
gi|114538869|gb|EAU41990.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Fulvimarina pelagi HTCC2506]
Length = 2650
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 73/216 (33%), Gaps = 32/216 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-------------DLTLIGGVKNY 242
G G+ + ++ ++ + T D G DLT G +
Sbjct: 1657 GVTFTPDGDPVIGLDGERVRAAITYT--DGAGRRTTVVTEPSEPLDPATDLTDANGDLLF 1714
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + S ++++VG+ G+DV++G S + +G+D+ G
Sbjct: 1715 VGSHAIDMSDPVNAGFVTAFVGSDGMDNIVGTPGDDVIVGLSGEDTLDGGAGDDLLAGQG 1774
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIV-----------------YDANEHKQDFLSDVERLR 345
G DT + +++ + +V A +D D+ER+R
Sbjct: 1775 GDDTLIGGGGNNVFEGGDGVDTAVVDYNAADAEFFLTPTGSLETAIGAIEDEFIDIERIR 1834
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
F D ++ + I ++ ++ G +
Sbjct: 1835 FDDGEELTIRQAENRIADFQRGNGQDNELDGTAADD 1870
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 24/174 (13%)
Query: 221 TIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSS-------------------IGGY 256
I+ GDD ++ GG N I L+ + G
Sbjct: 1120 AIWGDAGDDYIESGFGVDLVNGGYGNDIILDAGDEGDFLKGDEGDDVMATANGLDVLMGG 1179
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E I V G G+D ++G + + G+D + G DT +
Sbjct: 1180 EGKDAIFLGADASEVFGGEGDDFIVGGEGADFLLGNEGDDWIEAGKGFDTTAGDNSELFF 1239
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++ ++EH D S + + + + + + + + + D
Sbjct: 1240 NSRILGHDVMFAGSDEHDFDAESGDDIMVQGESVMRNEGMFGFDWVSFQGNVRD 1293
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D G N +D T + +I G TI + ++G G D++ GN ++
Sbjct: 1852 DFQRGNGQDNELD-GTAADDTIRGLGGADTIRGGGGRDLLLGDGGADLLNGNGDDDTLAG 1910
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND +G +G DT F++ + + +
Sbjct: 1911 GRGNDTVNGGAGDDTVFWFTGDGRDVVNGGGGTDALSVNGDEA 1953
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 265 HTVIESVVGSSGNDVV---IGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+IE+ D + I + N GND G+ G D
Sbjct: 1379 GDLIENAPTGMTADDLEQAISWDSGNFIMGGRGNDRIQGNGGDDVIDGD 1427
>gi|327269197|ref|XP_003219381.1| PREDICTED: stromelysin-1-like [Anolis carolinensis]
Length = 461
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 64/190 (33%), Gaps = 51/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T D+ +++ R A WS+V LTF +DI
Sbjct: 104 WGKKDLTYRILNYTPDMEIQDV------DKDIER-AFKVWSRVSPLTFTRVLQGDADILI 156
Query: 82 ISSNN-----------GYVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHEI 128
+ G Y + + +FD+ + W +G+ +G+ L A HE
Sbjct: 157 SFGSRDHGDFNPFDGPGGTVAHAYAPSSGIGGDAHFDEDENWSHGL-EGSNLFFVAAHEF 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVS 186
GH+LGL H N VM Y P+ +
Sbjct: 216 GHSLGLYHSNDPNA-------------------VMFPVYRQPELGQQILA--------QD 248
Query: 187 DIVAVQKIYG 196
DI +Q +YG
Sbjct: 249 DIQGIQHLYG 258
>gi|329115520|ref|ZP_08244261.1| Hypothetical protein APO_2592 [Acetobacter pomorum DM001]
gi|326695157|gb|EGE46857.1| Hypothetical protein APO_2592 [Acetobacter pomorum DM001]
Length = 110
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL D+ G D H++ G E RNP+ F Y+ + I +F
Sbjct: 35 FDGEWYLLVNPDVAEA-GID---PLVHFMNFGAHEKRNPNPDFDTETYLRLNP-YIASFP 89
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFV 481
P L H+ +G EGR
Sbjct: 90 LGPFL------HYVFYGYHEGRKF 107
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 13/95 (13%)
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYL 573
+E P F Y+ + D+ A D HF NFG E R+ F+ + YL
Sbjct: 27 QENTFPIYFDGEWYLLVNPDVAEAGIDP-------LVHFMNFGAHEKRNPNPDFDTETYL 79
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
+ + HY+ +G EGR
Sbjct: 80 RLNPYIASF----PLGPFLHYVFYGYHEGRKFQAP 110
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y D+ + + + HF FG E R+ FD+ YL + +
Sbjct: 40 YLLVNPDVAEA----GIDPLVHFMNFGAHEKRNPNPDFDTETYLRLNPYIASF----PLG 91
Query: 422 AARHYITHGVKEGRNPDA 439
HY+ +G EGR A
Sbjct: 92 PFLHYVFYGYHEGRKFQA 109
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 33/90 (36%), Gaps = 13/90 (14%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
+E P F Y+ + D+ A D HF NFG E R FD+ YL
Sbjct: 27 QENTFPIYFDGEWYLLVNPDVAEAGIDP-------LVHFMNFGAHEKRNPNPDFDTETYL 79
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ + HY+ +G EGR
Sbjct: 80 RLNPYIASF----PLGPFLHYVFYGYHEGR 105
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL D+ G D H++ G E RNP+ F Y+ + I +F
Sbjct: 35 FDGEWYLLVNPDVAEA-GID---PLVHFMNFGAHEKRNPNPDFDTETYLRLNP-YIASFP 89
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI 565
P L H+ +GY EGR
Sbjct: 90 LGPFL------HYVFYGYHEGRKF 107
>gi|326319474|ref|YP_004237146.1| Ig family protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323376310|gb|ADX48579.1| Ig family protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 3020
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 12/179 (6%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S++ G + + ++ ++++G +G+D + G ++V +GND G SG DT
Sbjct: 1234 ADSAVDGGKGDDSLTGDDWKDTLLGGAGDDTLQGKGGDDVLDGGAGNDKIMGGSGRDTVL 1293
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSIL---EY 364
+ Y A D K+ LSD+ LR D + + ++ +
Sbjct: 1294 FGRGDGRDDYYAGAAAQGSGDVLRLKEGVALSDLVLLRAQDDLVVRIAGGTDQLIAHSAF 1353
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLS---EGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ D ++ V G S EG D+ YL + D N G +
Sbjct: 1354 STQALDRLEFADGSVVALADLKLASGQSQATEGNDVI-----YLPAGGDTVNALGGNDT 1407
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 7/137 (5%)
Query: 193 KIYGAPKGS---LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+IYG G GNNI I Q I + G + + DL
Sbjct: 1006 QIYGDNDGPFVATGNNITWIPGQYHGDDTIDGGDGNDGILGGGGSDVLLGGAGNDLIHGD 1065
Query: 250 WSSI----GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S + Y + I + + G G D VIG + ++ GND+ G +G D
Sbjct: 1066 QSDVILLDAQYHGDDRIDGGEGNDILYGDGGADTVIGGAGDDYLNGGEGNDILWGGAGQD 1125
Query: 306 TFFYYAPSYLYKIYRFE 322
+ +Y+ + +
Sbjct: 1126 RLYGGLGDDVYRFEKGD 1142
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 27/181 (14%)
Query: 186 SDIV-AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIG 237
DI VQ +GA + + S T+ + G+D +D ++ +
Sbjct: 2746 YDIAIKVQDYWGASVSQRFSITVQAGAITGTSR-NDTLTGTSGNDTIDGLAGADTMSGLA 2804
Query: 238 GVKNYIDLNTE------SWSSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVI 281
G YI NT + + ++T + +E+ + +GN + +
Sbjct: 2805 GDDTYIVDNTGDKVVESANAGTDTVMSSVTYTLPSNVENLVLTGSSAINGTGNALDNRLT 2864
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY--DANEHKQDFLS 339
GN+ NV +G D DG +G DT + Y + R V D D
Sbjct: 2865 GNAGANVLTGGAGADYLDGGAGADTLAGGLGNDTYWLARGHGTDTVQENDTTSGNLDTAK 2924
Query: 340 D 340
Sbjct: 2925 F 2925
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 76/270 (28%), Gaps = 29/270 (10%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ G G D D +SV Y + +D D V ++K GAP
Sbjct: 1437 DFRGDNTFDGGDGDDRITGTGSSV--YAGAGNDTVDVPDATLMLGTGDDTVVLRKASGAP 1494
Query: 199 K----------GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-LNT 247
G+ + S + + G L +T G + L+
Sbjct: 1495 NRYARLIDGDLGATAQRTIRFASGIAPSDVAFSSVSTQGRKDLRVTWPGATADRPQALHV 1554
Query: 248 ESWSSIGGYEK-----------NMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGN 295
E + + + + V + G+D + G A++ +GN
Sbjct: 1555 EGFMDFSQAARAGFRFVFEDAPDTVWSFDDVFRRANSGTPGDDALRGTDADDTLSGLAGN 1614
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D DG +G D A + + + + D L + D + +
Sbjct: 1615 DTIDGLAGNDVLDGGAGFDTLRGGTGNDVLRAGEGGPGGTDVLYGDD----GDDTLYAAV 1670
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + A + G M+
Sbjct: 1671 GGASTEMRGGAGADTFHVGAGGGTHTIMRD 1700
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNM 260
G++ Y ++ +++ + G D + ++ + + + +L S+I G
Sbjct: 2804 AGDDTYIVD--NTGDKVVES--ANAGTDTVMSSVTYTLPSNVENLVLTGSSAINGT---- 2855
Query: 261 TIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++ + G++G +V+ G + + +G D G G DT++ +
Sbjct: 2856 ----GNALDNRLTGNAGANVLTGGAGADYLDGGAGADTLAGGLGNDTYWLARGHGTDTVQ 2911
Query: 320 RFENAIIVYDANEHKQDFLS 339
+ D + D S
Sbjct: 2912 ENDTTSGNLDTAKFAGDVSS 2931
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 39/133 (29%), Gaps = 8/133 (6%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND 278
T++ D + G L + G N TI + + G +G D
Sbjct: 1577 DTVWSF---DDVFRRANSGTPGDDALRGTDADDTLSGLAGNDTIDGLAGNDVLDGGAGFD 1633
Query: 279 VVIGNSANNVFFES----SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ G + N+V G DV G G DT + ++ A +
Sbjct: 1634 TLRGGTGNDVLRAGEGGPGGTDVLYGDDGDDTLYAAVGGASTEMRGGAGADTFHVGAGGG 1693
Query: 335 QDFLSDVERLRFA 347
+ + +
Sbjct: 1694 THTIMRDDAVAQD 1706
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 14/176 (7%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D D ++ G D+ S S ++ +N+T+ I + GN V++GN+ NN
Sbjct: 1938 DHPDDSVAEGANQGQDIIRSSVSYTLPDNVENLTLTGTLDIAGIGNGVGN-VIVGNAGNN 1996
Query: 288 VFFESSGNDVFDGSSGLDTFFY-----YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
V G D +G +G D + Y + + + + +VE
Sbjct: 1997 VLNGMGGIDRLEGGAGDDVYVDLNYNPYNSDQDQIVEQAGGGYDTLLLDAQSRRLPDNVE 2056
Query: 343 RLRFADQCIDSVNVKQRSILEYTASY-------EDLIQVIGQDVFESMKHFYEFGL 391
+L D + SY +D +G + +++ G
Sbjct: 2057 KLVLVDWSNSVRRFSTNPFFGFQHSYRAYDAQSDDTRVWLGGNSQDNVIDATNEGR 2112
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 23/64 (35%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G + + + G + + +G+D+ DG G D + +Y+ +V D
Sbjct: 596 FGDAAGNTLTGRRMADRLYGGAGDDILDGGEGSDYLEGGSGRDVYRFNGKFGHDVVRDEG 655
Query: 332 EHKQ 335
Sbjct: 656 GAGV 659
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 12/130 (9%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN---------MTIAQHTVIES 270
I GDD L + + G + ++ + + S G +N + +
Sbjct: 856 DVIEGGDGDDRL-YSAMIGYYSQVNADGSAVSRHGAVVQNHDPDDAGSSDWVDGGAGNDE 914
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G G DV++G + ++ G+D+ G G D + + I Y
Sbjct: 915 IRGGMGGDVLLGGTGDDGIAGMEGDDLIIGGEGNDGLYGDGVYDPQATEFIDGKIGAY-- 972
Query: 331 NEHKQDFLSD 340
N D +
Sbjct: 973 NHRGNDTIYG 982
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + ++ Y A +T+ G D + G + +++ G+D +G SG
Sbjct: 582 IRQGAVTNATRYITFGDAAGNTL----TGRRMADRLYGGAGDDILDGGEGSDYLEGGSGR 637
Query: 305 DTFFYYAPSYLYKIYRFENAIIV 327
D + + + A ++
Sbjct: 638 DVYRFNGKFGHDVVRDEGGAGVL 660
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 33/112 (29%), Gaps = 25/112 (22%)
Query: 224 DSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS---- 274
D+G D +D GG+ + L I G E + I + + G
Sbjct: 899 DAGSSDWVDGGAGNDEIRGGMGGDVLLGGTGDDGIAGMEGDDLIIGGEGNDGLYGDGVYD 958
Query: 275 ----------------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
GND + G + + G+D G G D +
Sbjct: 959 PQATEFIDGKIGAYNHRGNDTIYGGAGKDYIVGGVGSDQLFGGEGDDQIYGD 1010
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 55/172 (31%), Gaps = 15/172 (8%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-FDG-SSGLDTFFYYAPSYLYKIY 319
I + T E +D++ G + N+V GNDV G D + + +
Sbjct: 1782 IGEKTADELAGFDFADDLLTGGAGNDVLAGQGGNDVYLYRPGDGRDVITETSGNDTLRFG 1841
Query: 320 RFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTAS---------Y 368
+A V D+ + + D + ++ + + + +
Sbjct: 1842 AGISAADVRLVRTSSTPADWRGESTYYKATDTLVVALPDGGQVWIPGFFTEAGALETFEF 1901
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
D + QD+ + ++ + D Y + D G+++G
Sbjct: 1902 ADGTRWNAQDIQARITDVRGTANAQQGSTSDDI--YTVDHPDDSVAEGANQG 1951
Score = 42.0 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 16/128 (12%)
Query: 271 VVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++G D + G + A+++ +GNDV G G D + Y I
Sbjct: 1781 LIGEKTADELAGFDFADDLLTGGAGNDVLAGQGGNDVYLYRPGDGRDVIT---------- 1830
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL----EYTASYEDLIQVIGQDVFESMKH 385
D L + AD + + Y A+ ++ +
Sbjct: 1831 -ETSGNDTLRFGAGISAADVRLVRTSSTPADWRGESTYYKATDTLVVALPDGGQVWIPGF 1889
Query: 386 FYEFGLSE 393
F E G E
Sbjct: 1890 FTEAGALE 1897
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
D + G + N+ +G D DG +G D +Y R + +
Sbjct: 2340 DELKGGAGNDRLVSYAGLDTMDGGAGDDVLVGG---DIYLFGRGDGNDTIES 2388
Score = 38.2 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 26/178 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-SSGNDVFDGSSGL------D 305
+ G N + + ++++ G +G+DV++G F GND + +G
Sbjct: 2342 LKGGAGNDRLVSYAGLDTMDGGAGDDVLVGGDIY--LFGRGDGNDTIESWTGSVNGGRTQ 2399
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL------------SDVERLRFADQCIDS 353
T + + + + + + QD + + V R+ FAD
Sbjct: 2400 TLRFKSGVGAQDVLLQRDGDALKVSLRGSQDSITVRSFYSQNASATGVRRIEFADGTAWG 2459
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR----DITFDSYLYLGS 407
+ R ++ ++ DV + ++ + G D D+ Y S
Sbjct: 2460 YDTLVRRADPTVVNHAPVLASPLPDVRAAAGTAFQMSVPAGTFTDPDAN-DALGYRAS 2516
Score = 37.4 bits (85), Expect = 7.9, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 46/161 (28%), Gaps = 49/161 (30%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVF------------------------------ 298
+ V+ +GND+V+ ++V G+D
Sbjct: 838 DHVIAGAGNDLVLTGYGSDVIEGGDGDDRLYSAMIGYYSQVNADGSAVSRHGAVVQNHDP 897
Query: 299 ---------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----------DFLS 339
DG +G D + ++ I + ++ D +
Sbjct: 898 DDAGSSDWVDGGAGNDEIRGGMGGDVLLGGTGDDGIAGMEGDDLIIGGEGNDGLYGDGVY 957
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + F D I + N + + A + ++ +G D
Sbjct: 958 DPQATEFIDGKIGAYNHRGNDTIYGGAGKDYIVGGVGSDQL 998
>gi|253995849|ref|YP_003047913.1| Hemolysin-type calcium-binding domain-containing protein
[Methylotenera mobilis JLW8]
gi|253982528|gb|ACT47386.1| Hemolysin-type calcium binding domain protein [Methylotenera mobilis
JLW8]
Length = 2787
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 8/171 (4%)
Query: 221 TIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T++D D L +T G L++ + +++ G + N T+ + + ++++G +G+D
Sbjct: 2498 TVWDKAKLTTDGLVVTGTSGNDTLNGLSSYN-NTLVGGDGNDTLYGNNLADTLIGGAGSD 2556
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ + NN+F GND+ SG D + I ++ QD
Sbjct: 2557 SLNDTAGNNLFDGGLGNDIITAGSGNDLLIGGFGND--TITTGTGYDVIVFNKGDGQDI- 2613
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ AD I S L +T S DLI +G ++K +Y
Sbjct: 2614 --INASTGADNTISLGGNFAYSDLSFTKSTNDLILKVGTADQITLKDWYVG 2662
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 25/176 (14%)
Query: 221 TIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T++D D L +T G L++ + +++ G E N ++ + + G +GND
Sbjct: 1950 TVWDKAKLTTDGLVVTGTSGNDTLNGLSSYN-NTLLGMEGNDVLSGGGGNDILDGGAGND 2008
Query: 279 VVIGNSANNVFFESSGNDVFDG------------------SSGLDTFFYYAPSYLYKIYR 320
V+ G + + +G+DV +G +G DT A S Y+ +
Sbjct: 2009 VLNGGALADTLIGGAGDDVLNGNSSASYSYYDTTGNLYEGGTGNDTLNGTAGSDTYRYNK 2068
Query: 321 FENAIIV----YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ A + ++N D + + +D + N L++ + + +
Sbjct: 2069 GDGADTINEGYQNSNTTSVDKIVLGADIAVSDVTVGRPNGTSNLTLKFANAGDSIT 2124
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
D + + YG G + ++ I + K + + + G+D L+ G+ +
Sbjct: 865 AGDSITINNWYGDATGRIEQVVFADGTIWDKTKLTADGLVVIGTTGNDTLN-----GLSS 919
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN--------SANNVFFESS 293
Y + ++ G + N T+ + ++++G +G+D++ GN +A N++ +
Sbjct: 920 YNN-------TLLGMDGNDTLNGSGLTDTLIGGAGDDILNGNLAGYSYYDTAGNIYEGGT 972
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKI---YRFENAIIVYDANEHKQDFLSDV 341
GND +G++G DT+ Y I Y+ N V +SDV
Sbjct: 973 GNDTLNGTAGSDTYRYNKGDGADTINEGYQNNNTTSVDKIVLGADIAVSDV 1023
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 52/211 (24%)
Query: 221 TIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T++D D L +T G L++ + +++ G + N T+ T+ ++++G +G+D
Sbjct: 1419 TVWDKAKLTTDGLVVTGTSGNDTLNGLSSYN-NTLLGMDGNDTLQGSTLADTLIGGAGDD 1477
Query: 279 VVIGNSAN---------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----------- 318
V+ GNS+ N++ GND +G++G DT+ Y I
Sbjct: 1478 VLNGNSSASYSYYDTTGNLYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTS 1537
Query: 319 ---------------------------YRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+F N N D +E++ FAD +
Sbjct: 1538 VDKIVLGADIAVSDVTLMRANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTV 1597
Query: 352 DSVN--VKQRSILEYTASYEDLIQVIGQDVF 380
++ T+ + L + +
Sbjct: 1598 WDKAKLTTDGLVVTGTSGNDTLNGLSSYNNT 1628
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 14/154 (9%)
Query: 221 TIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI+D L ++G N +D +++ G + + + + ++G +GND
Sbjct: 2145 TIWDKTKLTTDGLVVVGSASNDTLDGLNNYNNTLKGMDGDDVLIGREREDILIGGAGNDT 2204
Query: 280 VIGN--------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ G +A N++ +GND +G++G DT+ Y I + N
Sbjct: 2205 LHGYVAGYSSSETAGNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGSQ-----NGN 2259
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D + + +D + N IL++
Sbjct: 2260 TTSVDKIVLGADIAVSDVTLMRANNSNNLILKFA 2293
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 52/211 (24%)
Query: 221 TIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T++D D L +T G L++ + +++ G + N T+ T+ ++++G +G+D
Sbjct: 1596 TVWDKAKLTTDGLVVTGTSGNDTLNGLSSYN-NTLLGMDGNDTLQGSTLADTLIGGAGDD 1654
Query: 279 VVIGNSAN---------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----------- 318
V+ GNS+ N++ GND +G++G DT+ Y I
Sbjct: 1655 VLNGNSSASYSYYDTTGNLYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTS 1714
Query: 319 ---------------------------YRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+F N+ + D +E++ FAD +
Sbjct: 1715 VDKIVLGADIAVSDVAVVRPTDSSNLILKFANSGDSITISNWYSDATGRIEQVVFADGTV 1774
Query: 352 DSVN--VKQRSILEYTASYEDLIQVIGQDVF 380
++ T+ + L + +
Sbjct: 1775 WDKAKLTTDGLVVTGTSGNDTLNGLSSYNNT 1805
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 253 IGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFD------------ 299
+ G N T+ + + ++G +GND ++G + +G+D+ +
Sbjct: 1257 VTGTTGNDTLNGLSGYNNTLIGGAGNDTLVGVYLADTLIGGAGDDILNGSIAGYSYYDTA 1316
Query: 300 -----GSSGLDTFFYYAPSYLYKIYRFENAIIV----YDANEHKQDFLSDVERLRFADQC 350
G +G DT A S Y+ + + A I+ + N D + + +D
Sbjct: 1317 GNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAVSDVT 1376
Query: 351 IDSVNVKQRSILEYT 365
+ N IL++
Sbjct: 1377 LMRANNSNNLILKFA 1391
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 75/239 (31%), Gaps = 69/239 (28%)
Query: 199 KGSLGNNIYKIEVQQKDSPF---IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ +++ TI+ SGGDD L + G
Sbjct: 704 SGTSDDDVILGNTSANTISGGLGNDTIFGSGGDDTLSGGGGNDLL-------------DG 750
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSAN--------NVFFESSGNDVFDGSSGLDTF 307
+ N T++ + ++++G +GND++ GN A N++ +GND+ +G++G DT+
Sbjct: 751 GDGNDTLSGSNLADTLIGGAGNDILNGNIAGYSYSDTVGNIYEGGAGNDILNGTAGSDTY 810
Query: 308 FYYAPSYLYKI--------------------------------------YRFENAIIVYD 329
Y I +F NA
Sbjct: 811 RYNKGDGADIINEGYQNGNTTSVDKILLGANIAVSDVTLSRPNGTTNLVLKFANAGDSIT 870
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
N D +E++ FAD I L +I G D + +
Sbjct: 871 INNWYGDATGRIEQVVFADGTIWDKTKLTADGLV-------VIGTTGNDTLNGLSSYNN 922
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 51/210 (24%)
Query: 221 TIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
TI+D D L +T G L + +++ G N T+ + ++++G +G+D
Sbjct: 1243 TIWDKTKLTADGLVVTGTTGNDTLNGL-SGYNNTLIGGAGNDTLVGVYLADTLIGGAGDD 1301
Query: 279 VVIG--------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI------------ 318
++ G ++A N++ +GND +G++G DT+ Y I
Sbjct: 1302 ILNGSIAGYSYYDTAGNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSV 1361
Query: 319 --------------------------YRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+F N N D +E++ FAD +
Sbjct: 1362 DKIVLGADIAVSDVTLMRANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVW 1421
Query: 353 SVN--VKQRSILEYTASYEDLIQVIGQDVF 380
++ T+ + L + +
Sbjct: 1422 DKAKLTTDGLVVTGTSGNDTLNGLSSYNNT 1451
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 52/211 (24%)
Query: 221 TIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T++D D L +T G L++ + +++ G E + T+ T+ + +VG +G+D
Sbjct: 2321 TVWDKAKLTTDGLVVTGTSGNDTLNGLSSYN-NTLLGMEGSDTLYGGTLADILVGGAGDD 2379
Query: 279 VVIG---------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----------- 318
V+ G ++ N++ GND +G++G DT+ Y I
Sbjct: 2380 VLNGIYNGGTSYWDTTGNIYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGSQNGNTTS 2439
Query: 319 ---------------------------YRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+F N N D +E++ FAD +
Sbjct: 2440 VDKIVLGADIAVSDVTLMRANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTV 2499
Query: 352 DSVN--VKQRSILEYTASYEDLIQVIGQDVF 380
++ T+ + L + +
Sbjct: 2500 WDKAKLTTDGLVVTGTSGNDTLNGLSSYNNT 2530
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 18/114 (15%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS-- 302
L T+ G + + +++G GND + G++ + +G+DV +G+S
Sbjct: 1780 LTTDGLVVTGTSGNDTLNGLSSYNNTLLGMDGNDTLQGSTLADTLIGGAGDDVLNGNSSA 1839
Query: 303 ----------------GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G DT A S Y+ + + A I+ + ++ D
Sbjct: 1840 SYSYYDTTGNLYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVD 1893
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 50/147 (34%), Gaps = 38/147 (25%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV------------------GS 274
T G + + L S ++I G N TI +++ GS
Sbjct: 701 FTGSGTSDDDVILGNTSANTISGGLGNDTIFGSGGDDTLSGGGGNDLLDGGDGNDTLSGS 760
Query: 275 SGNDVVIGNSANNVFF-----------------ESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ D +IG + N++ +GND+ +G++G DT+ Y
Sbjct: 761 NLADTLIGGAGNDILNGNIAGYSYSDTVGNIYEGGAGNDILNGTAGSDTYRYNKGDGADI 820
Query: 318 I---YRFENAIIVYDANEHKQDFLSDV 341
I Y+ N V +SDV
Sbjct: 821 INEGYQNGNTTSVDKILLGANIAVSDV 847
Score = 37.8 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 255 GYEKNMTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ ++ I T +++ G SS N+ ++G N+ S D G +G D +
Sbjct: 1075 TTDGSVVIGT-TGNDTLNGLSSYNNTLLGMDGNDTLNGSGLTDTLIGGAGDDILNGHIAG 1133
Query: 314 YLY-----KIYRFENAIIVYDANEHKQDFLSD 340
Y Y IY + + +
Sbjct: 1134 YSYYDTAGNIYEGGTGNDTLNGTAGSDTYRYN 1165
>gi|86139953|ref|ZP_01058518.1| hypothetical protein MED193_02960 [Roseobacter sp. MED193]
gi|85823371|gb|EAQ43581.1| hypothetical protein MED193_02960 [Roseobacter sp. MED193]
Length = 557
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 50/183 (27%), Gaps = 23/183 (12%)
Query: 198 PKGSLGNNIYKIEVQQKDSPF--IQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
P G+ +Y + +Y G D+L D + + ID
Sbjct: 264 PVTPRGDVVYGFDTPDHIGGSEDNDLVYGGDGSDVLLGYGGDDFLIGAAGDDTIDGGEGD 323
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------- 299
I G +A + + G + +DV+ + F +GND
Sbjct: 324 D-RISGGHGEDLLAGGAGDDILSGGADDDVLRDGHGADRLFGDAGNDTIYLADDLEADQV 382
Query: 300 -GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G +G D A ++ + D+ D +E D
Sbjct: 383 YGGAGDDILDLTAGDRAARVDVAAGTVTRADSP---TDTFDGIEIFTAGDGAEVFDLSGF 439
Query: 359 RSI 361
+
Sbjct: 440 FTP 442
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 9/132 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
IGG E N + + ++G G+D +IG + ++ G+D G G D A
Sbjct: 281 IGGSEDNDLVYGGDGSDVLLGYGGDDFLIGAAGDDTIDGGEGDDRISGGHGEDLLAGGAG 340
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I V D A + + Y + +D++
Sbjct: 341 DD---ILSGGADDDVLRDGHGADRLFGD------AGNDTIYLADDLEADQVYGGAGDDIL 391
Query: 373 QVIGQDVFESMK 384
+ D +
Sbjct: 392 DLTAGDRAARVD 403
>gi|260432574|ref|ZP_05786545.1| type I secretion target repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416402|gb|EEX09661.1| type I secretion target repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 759
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 4/134 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SGGDD G + +D + + + G + + + + + G +G+D++ G
Sbjct: 603 SGGDD---FLFGGLGDDRLDGGSGDDTLLAG-DGDDFLFGGVGQDVLSGGAGDDLIKGGD 658
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ ND+ +G G DT + + ++ E + D E D +
Sbjct: 659 GNDFIDGGDNNDILEGGRGNDTLVGGSGADVFVFRPGEGVDTILDFEEGLDLIRIDQPGV 718
Query: 345 RFADQCIDSVNVKQ 358
F D I S +
Sbjct: 719 SFEDLTITSRDGST 732
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 36/105 (34%), Gaps = 10/105 (9%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND +G+ ++ F G+D DG SG DT + F +
Sbjct: 596 GNDSALGSGGDDFLFGGLGDDRLDGGSGDDTLLAGDGDD----FLFGGVGQDVLSGGAGD 651
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + + F D ILE + L+ G DVF
Sbjct: 652 DLIKGGDGNDFIDGG------DNNDILEGGRGNDTLVGGSGADVF 690
>gi|29470157|gb|AAO74635.1| ApxIIA [Actinobacillus pleuropneumoniae]
Length = 956
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + V G +G D + GN ++ F +G+DV DG +G + + + +
Sbjct: 725 IFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGK 784
Query: 321 FENAII--VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D N+ D ++L F+D + +
Sbjct: 785 DNDIYVHKTGDGNDSITDS-DGQDKLAFSDVNLKDLTF 821
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--DGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG+ G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSDGQDKLAFSDVN 815
>gi|119383048|ref|YP_914104.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119372815|gb|ABL68408.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 589
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTI 262
+ + T+ G+D ++ G + L + I G N TI
Sbjct: 49 DGADGVNDWINAGAGNDTVNGGAGNDTIE-----GGEGDDLLRGNAGHDIIRGDAGNDTI 103
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G G+D++ G++ ++V GND F+G G DT
Sbjct: 104 NGDAGNDTIEGGEGDDLLRGDAGDDVLRGGEGNDTFNGGIGNDTIEGE 151
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 58/161 (36%), Gaps = 4/161 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D L+ GG+ N + + G + N + +++ G +G+D + G +
Sbjct: 171 GSDTLN----GGLGNDTLDGGDDDDLLRGDDGNDLLLGGAGNDTLNGGNGDDTLEGGEGD 226
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ +G+D+ G G DT + + + ++++I + + +
Sbjct: 227 DLLRGDAGHDLLQGGDGNDTLEGGQGNDVLEGGDGDDSLIGGPGADTMTGGAGNDRFVVS 286
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I + + D + + ++ +
Sbjct: 287 GGGDLITDFDAVTGIGDGQSDNNDFVDLNAFYNGTTLAAWN 327
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 8/118 (6%)
Query: 233 LTLIGGVKNYIDLNTE---SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ +D ++ ++ V + + +GND V G + N+
Sbjct: 17 FSSSAQPDGIVDGTDGDDYMVPGYVDHQGDVVDGADGVNDWINAGAGNDTVNGGAGNDTI 76
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHKQDFLSDVE 342
G+D+ G++G D A + + D L E
Sbjct: 77 EGGEGDDLLRGNAGHDIIRGDAGNDTINGDAGNDTIEGGEGDDLLRGDAGDDVLRGGE 134
>gi|186684782|ref|YP_001867978.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
gi|186467234|gb|ACC83035.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
Length = 1597
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 11/167 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLN---TESWSSIG 254
G +GN+IY ++ I+ + + G DL++ ++ N +L T + G
Sbjct: 1057 NGGVGNDIYTVD--NIGDIIIEGL--NAGTDLVNSSVSFVLADNVENLTLTGTGAIDGTG 1112
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N+ I +T + G GND + G+S N+ +GND DG G D+ A +
Sbjct: 1113 NILNNILIG-NTGANKLSGGDGNDSLFGSSGNDTLLGGAGNDTLDGGLGADSLNGGAGND 1171
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+Y + + I+ + + D + D + +I
Sbjct: 1172 IYTVDNVSD--IIVEGLDAGIDLVKSSVSFVLTDNVENLTLTGTGAI 1216
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 14/173 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLN---TESWSSIG 254
G +GN+IY ++ ++++ + G DL++ ++ N+ +L T + ++ G
Sbjct: 1381 NGGVGNDIYTVD--SVSDIIVESL--NAGTDLVNSSVSWTLADNFENLTLIGTGAITATG 1436
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N+ I +T ++ G GND + GNS N+ GND G G DT A
Sbjct: 1437 NGLNNILIG-NTGANTLSGGDGNDNLFGNSGNDSLLGGVGNDSLFGGIGKDTLTGGAGQD 1495
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + DF + + + + ++
Sbjct: 1496 SLYLTDTRTGGY-----DTITDFTVGDDTIFISKAEFGLGQAQDTTLDSGLFR 1543
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 9/162 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL---IGGVKNYIDLNTESWSSIGGYEKN 259
GN+ Y ++ +++ S G DL+ ++ +G + L + G N
Sbjct: 953 GNDTYTVDTIG--DTIVES--ASAGTDLVKSSVSWVLGNNLENLTLTGTDAINGTGNSLN 1008
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +T + G GND ++G + N+ +GND DG G D+ + +Y +
Sbjct: 1009 NILTGNTGANILSGEGGNDTLLGGAGNDTLLGGAGNDTLDGGLGADSLNGGVGNDIYTVD 1068
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ I+ + D ++ AD + +I
Sbjct: 1069 NIGD--IIIEGLNAGTDLVNSSVSFVLADNVENLTLTGTGAI 1108
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 14/143 (9%)
Query: 201 SLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ N Y Q F TI D G G ++L ++ I G
Sbjct: 848 NNNNGTYTYTPVQNYYGSDSFTYTISDGQG---------GSSNATVNLTINQFNLINGTS 898
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
T+ ++ ++G GND + G N+ GND DG +G D+ + Y
Sbjct: 899 GAETLNGTVNMDIILGLLGNDTLNGLGDNDTLDGGDGNDFLDGGTGNDSLIGGKGNDTYT 958
Query: 318 IYRFENAIIVYDANEHKQDFLSD 340
+ + I+ ++ D +
Sbjct: 959 VDTIGDTIV--ESASAGTDLVKS 979
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN---TESWSSIGG 255
G GN+IY ++ S I D+G D + N +L T + G
Sbjct: 1165 NGGAGNDIYTVD---NVSDIIVEGLDAGIDLVKSSVSFVLTDNVENLTLTGTGAIDGTGN 1221
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ I +T + G GND + G+S N+ +G+D DG G+DT A + +
Sbjct: 1222 ILNNILIG-NTGANKLSGGDGNDSLFGSSGNDSLLGGAGDDTLDGGVGIDTLNGGAGNDI 1280
Query: 316 YKIYRFENAII 326
Y + + I
Sbjct: 1281 YTVDSLSDMIT 1291
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 11/167 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLN---TESWSSIG 254
G GN+IY ++ + G DL+ + +N+ +L + + ++ G
Sbjct: 1273 NGGAGNDIYTVDSLSDMITEGL----NAGIDLVKSAVSWTLGENFENLTLTGSGAITATG 1328
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N+ I T ++ G GND + G+S N+ G+D DG G D +
Sbjct: 1329 NSLDNILIGS-TGANTLTGGDGNDSLFGSSGNDSLLGGVGDDTLDGGLGADNLNGGVGND 1387
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+Y + + I+ ++ D ++ AD + + +I
Sbjct: 1388 IYTVDSVSD--IIVESLNAGTDLVNSSVSWTLADNFENLTLIGTGAI 1432
Score = 37.4 bits (85), Expect = 8.7, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 52/168 (30%), Gaps = 8/168 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G + L+ L G I ++ G N T+ +++ G G D + G
Sbjct: 1001 NGTGNSLNNILTGNTGANILSGEGGNDTLLGGAGNDTLLGGAGNDTLDGGLGADSLNGGV 1060
Query: 285 ANNVFFE-SSGNDVFDG-SSGLD------TFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
N+++ + G+ + +G ++G D +F + + +
Sbjct: 1061 GNDIYTVDNIGDIIIEGLNAGTDLVNSSVSFVLADNVENLTLTGTGAIDGTGNILNNILI 1120
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ +L D L A + L +G D
Sbjct: 1121 GNTGANKLSGGDGNDSLFGSSGNDTLLGGAGNDTLDGGLGADSLNGGA 1168
>gi|257095236|ref|YP_003168877.1| Hemolysin-type calcium-binding domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047760|gb|ACV36948.1| Hemolysin-type calcium binding domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 3662
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ +S++G GND + G + + G D DG + DT A
Sbjct: 2748 TLDGMAGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAAGPGLDTVDGGADADTLVVLA 2807
Query: 312 PSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVN------VKQRSILEY 364
Y I R +D L +E + FAD +
Sbjct: 2808 NFADYSITRVNETDTRLVNAGTGEDIVLRSIEFIAFADGGKTRSQYWNNVIDNLSNDWTG 2867
Query: 365 TASYEDLIQVIGQDVFESMK 384
TA +++ ++G D +
Sbjct: 2868 TAGNDNINGLVGNDTLAGLA 2887
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 4/134 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ +S++G GND + G + + +G D DG + DT
Sbjct: 650 TLDGMAGNDTLDGGLGNDSLLGGLGNDNLFGAAGADTLAAGTGLDTVDGGADADTLVVLG 709
Query: 312 PSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y R +D +VE + F D +V + +A+ +
Sbjct: 710 NFADYTRTRPNATDTRLVNAGTGEDVTFRNVESVVFLDGTRTLADV---HLNIVSANNDS 766
Query: 371 LIQVIGQDVFESMK 384
L+ G D + +
Sbjct: 767 LVGTPGNDTLDGLA 780
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 60/188 (31%), Gaps = 13/188 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ + Q + TI +GG DL+ N +DL + S G
Sbjct: 1149 TLTGSDDLVLTEQFEGRAGADTIDGAGGLDLVRYDNAAAGVN-VDLAGGTASDGYGTTDT 1207
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNV----FFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ IE GS D + G +A N F GND DG G D Y +
Sbjct: 1208 LSN-----IEGARGSKFADTLSGGNAANDALEFFMGLEGNDTIDGGRGYDRAEYTLSTAG 1262
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLI 372
+ D L +E +R F D S E +++
Sbjct: 1263 VNVTLGGAGSGTASDGYGTTDTLISIEGVRGSAFNDTLTGSNAADIFESFEGREGNDNIN 1322
Query: 373 QVIGQDVF 380
+ G D
Sbjct: 1323 GMGGTDRV 1330
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 60/188 (31%), Gaps = 13/188 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ + Q + TI +GG DL+ N +DL + S G
Sbjct: 2198 TLTGSDDLVLTEQFEGRAGADTIDGAGGLDLVRYDNAAAGVN-VDLAGGTASDGYGTTDT 2256
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNV----FFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ IE GS D + G +A N F GND DG G D Y +
Sbjct: 2257 LSN-----IEGARGSKFADTLSGGNAANDALEFFMGLEGNDTIDGGRGYDRAEYTLSTAG 2311
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLI 372
+ D L +E +R F D S E +++
Sbjct: 2312 VNVTLGGAGSGTASDGYGTTDTLISIEGVRGSAFNDTLTGSNAADIFESFEGREGNDNIN 2371
Query: 373 QVIGQDVF 380
+ G D
Sbjct: 2372 GMGGTDRV 2379
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 9/192 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQ-TIYDS-GGDDLLD-LTLIGGVKNYIDLNTESWSS--I 253
G +Y T D GG D L+ + + G +++ D T S + +
Sbjct: 1324 MGGTDRVVYTASKAGVTVNLATGTASDGYGGTDSLNNIEDVLGSRDFNDSLTGSAADNKL 1383
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N T+ +S++G GND + G + + G D DG + DT
Sbjct: 1384 EGQGGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAAGPGLDTVDGGADADTLVVLGNF 1443
Query: 314 YLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y R +D +VE + F D +V + +A+ + ++
Sbjct: 1444 ADYTRTRPNATDTRLVFAGTGEDITFRNVESVVFLDGTRTLADV---HLNIVSANNDVIV 1500
Query: 373 QVIGQDVFESMK 384
G D + +
Sbjct: 1501 GTPGNDTLDGLA 1512
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 9/192 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQ-TIYDS-GGDDLLD-LTLIGGVKNYIDLNTESWSS--I 253
G +Y T D GG D L+ + + G +++ D T S + +
Sbjct: 2373 MGGTDRVVYTASKAGVTVNLATGTASDGYGGTDSLNNIEDVLGSRDFNDSLTGSAADNKL 2432
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N T+ +S++G GND + G + + G D DG + DT
Sbjct: 2433 EGQGGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAAGPGLDTVDGGADADTLVVLGNF 2492
Query: 314 YLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y R +D +VE + F D +V + +A+ + ++
Sbjct: 2493 ADYTRTRPNATDTRLVFAGTGEDITFRNVESVVFLDGTRTLADV---HLNIVSANNDVIV 2549
Query: 373 QVIGQDVFESMK 384
G D + +
Sbjct: 2550 GTPGNDTLDGLA 2561
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 25/200 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------------DLTLIGGVKNYIDLNTESWSSIGGYE 257
T+ GDD D G + + ++
Sbjct: 1822 NDTLDGLAGADTLVGLDGDDTYFVDVAGDVVTEGDGAGSGSDRVNVVFTAGGTYTLAANV 1881
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N TIA T +V G++ ++V++GN+ N+ GND DG G+DT + Y
Sbjct: 1882 ENATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGNDTLDGGLGIDTLVGGLGNDFYA 1941
Query: 318 IYR-----------FENAIIVYDANEHKQDFLSDVERLRFADQC--IDSVNVKQRSILEY 364
I + + V A ++VE + ++ + L+
Sbjct: 1942 IDTLADVVTENPGEGNDGVAVLLAAGATYTLAANVENAGIGNATPGVNLTGNALDNTLQG 2001
Query: 365 TASYEDLIQVIGQDVFESMK 384
+ L G D
Sbjct: 2002 NSQANVLNGSTGNDALYGNA 2021
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 25/200 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------------DLTLIGGVKNYIDLNTESWSSIGGYE 257
T+ GDD D G + + ++
Sbjct: 773 NDTLDGLAGTDTLVGLDGDDTYFVDVAGDVVTEGDGAGSGSDRVNVVFTAGGTYTLAANV 832
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N TIA T +V G++ ++V++GN+ N+ GND DG G+DT + Y
Sbjct: 833 ENATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGNDTLDGGLGIDTLVGGLGNDFYA 892
Query: 318 IYR-----------FENAIIVYDANEHKQDFLSDVERLRFADQC--IDSVNVKQRSILEY 364
I + + V A ++VE + ++ + L+
Sbjct: 893 IDTLADVVTENPGEGNDGVAVLLAAGATYTLAANVENAGIGNATPGVNLTGNALDNTLQG 952
Query: 365 TASYEDLIQVIGQDVFESMK 384
+ L G D
Sbjct: 953 NSQANVLNGSTGNDALYGNA 972
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ +S++G GND + G + + G D DG + DT
Sbjct: 1699 TLDGTAGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAAGPGLDTVDGGADADTLVVLG 1758
Query: 312 PSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y R +D +VE + F D +V + +A+ +
Sbjct: 1759 NFADYTRTRPNATDTRLVFAGTGEDVTFRNVESVVFLDGTRTLADV---HLNIVSANNDV 1815
Query: 371 LIQVIGQDVFESMK 384
++ G D + +
Sbjct: 1816 IVGTPGNDTLDGLA 1829
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 45/178 (25%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-----------LIGGVKNYIDLNT 247
G LGN+IY+ + + I D+GG D ++L G ID N
Sbjct: 25 NGGLGNDIYRYSLGSGND----VISDTGGADTIELADPLHLYSGWNFYRSGDDLVIDFNG 80
Query: 248 E-----------------------------SWSSI-GGYEKNMTIAQHTVIESVVGSSGN 277
+ S+S++ G N + + E + G G+
Sbjct: 81 QGQLTVTNQFLGAPIIETLAFADGSALYSFSFSNLLTGTVGNDVLIGTSSGEVINGGGGD 140
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D++ GN ++ F G+D G G+D + A + + + ++ + +
Sbjct: 141 DLIFGNEGDDTLFGGEGDDELSGGPGIDALYGDAGNDELHVLKGDSVVDGGAGQDEAT 198
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 8/169 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL--NTESWSSI 253
G P + + + + D GD + + G + +++ ++
Sbjct: 1501 GTPGNDTLDGLAGADTLVGLDGDDTYVVDVAGDVVTEGDGAGSGSDRVNVVFTAGGTYTL 1560
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ TIA T +V G++ ++V++GN+ N+ GND DG++G+DT +
Sbjct: 1561 AANVEKATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGNDTLDGNAGIDTLVGGLGN 1620
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y + A ++ + D + + FA + +
Sbjct: 1621 DSYTVDV--PADVITELLGEGTDQV----NVLFASAGTYILAANVENAQ 1663
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 8/169 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL--NTESWSSI 253
G P + + + + D GD + + G + +++ ++
Sbjct: 2550 GTPGNDTLDGLAGADTLVGLDGDDTYVVDVAGDVVTEGDGAGSGSDRVNVVFTAGGTYTL 2609
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ TIA T +V G++ ++V++GN+ N+ GND DG++G+DT +
Sbjct: 2610 AANVEKATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGNDTLDGNAGIDTLVGGLGN 2669
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y + A ++ + D + + FA + +
Sbjct: 2670 DSYTVDV--PADVITELLGEGTDQV----NVLFASAGTYILAANVENAQ 2712
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G N T+ ++++G GND + G++ + +GND G G DT
Sbjct: 3344 SINGSGGNDTLGGAAGNDTLIGGLGNDSLSGDAGADALDGGAGNDRVVGGDGNDTLTGSG 3403
Query: 312 PSYLYKIYRFENAIIV 327
+ +
Sbjct: 3404 GNDTLSGEAGSDTYAF 3419
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 29/141 (20%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV----------------- 267
+ G+D + Y + + + I G N++ + TV
Sbjct: 357 ADGNDTIVGGAFADTAAYDNDSDGTDGGIYGAIVNLSASSITVNGVTGYGSGVTVGSLMA 416
Query: 268 ------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
IE++ GS+ +D V+G+S N + GND DG +G D+
Sbjct: 417 RDSFGDTDSLNSIENIFGSARSDFVLGSSGANWLAGNEGNDTLDGGAGNDSLLGGDGDDT 476
Query: 316 YKIYRFENAIIVYDANEHKQD 336
Y + + + D D
Sbjct: 477 YVVDVAGDVVTEGDGAGSGSD 497
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 18/165 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------------DLTLIGGVKNYIDLNTESWSSIGGYE 257
++ GDD D G + + ++
Sbjct: 456 NDTLDGGAGNDSLLGGDGDDTYVVDVAGDVVTEGDGAGSGSDRVNVVFTAGGTYTLAANV 515
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ TIA T +V G++ ++V++GN+ N+ GND DG++G+DT + Y
Sbjct: 516 EKATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGNDTLDGNAGIDTLVGGLGNDSYT 575
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ A ++ + D + + FA + +
Sbjct: 576 VDV--PADVITELLGEGTDQV----NVLFASAGTYILAANVENAQ 614
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 13/114 (11%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ +I SGG+D L G I G N +++ +++ G +
Sbjct: 3339 ANTNDSINGSGGNDTL--GGAAGNDTLI-----------GGLGNDSLSGDAGADALDGGA 3385
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
GND V+G N+ S GND G +G DT+ + I V
Sbjct: 3386 GNDRVVGGDGNDTLTGSGGNDTLSGEAGSDTYAFGLGFGQEVIEDLGAVGEVDT 3439
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 7/137 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + +++ G GND + G + N+ G D G +G D A S
Sbjct: 3160 GSPGNDVLNGTGGDDTLAGGLGNDSLSGGAGNDDLQGGEGIDTLAGGAGNDLLDGGAGSD 3219
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+Y+ I+ + ++ + A I + + ++ SY+DL+
Sbjct: 3220 VYQFAIGGGDDIIEQNDP----LAGSLDTVVLAS-PIGGLGSGETTLTRGWHSYDDLVIT 3274
Query: 375 I--GQDVFESMKHFYEF 389
+ G E + H
Sbjct: 3275 VNSGTPGAEVVDHLVVH 3291
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 69/219 (31%), Gaps = 22/219 (10%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
AS GY T +S+I GA + + F + G+D +
Sbjct: 1195 GGTASDGYGTTDTLSNIE------GARGSKFADTLSGGNAANDALEFFMGL---EGNDTI 1245
Query: 232 DL------TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
D +++ S + T IE V GS+ ND + G++A
Sbjct: 1246 DGGRGYDRAEYTLSTAGVNVTLGGAGSGTASDGYGTTDTLISIEGVRGSAFNDTLTGSNA 1305
Query: 286 NNVFF---ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++F GND +G G D Y A + D L+++E
Sbjct: 1306 ADIFESFEGREGNDNINGMGGTDRVVYTASKAGVTVNLATG---TASDGYGGTDSLNNIE 1362
Query: 343 RLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D + LE + L +G D
Sbjct: 1363 DVLGSRDFNDSLTGSAADNKLEGQGGNDTLDGGLGNDSL 1401
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 69/219 (31%), Gaps = 22/219 (10%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
AS GY T +S+I GA + + F + G+D +
Sbjct: 2244 GGTASDGYGTTDTLSNIE------GARGSKFADTLSGGNAANDALEFFMGL---EGNDTI 2294
Query: 232 DL------TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
D +++ S + T IE V GS+ ND + G++A
Sbjct: 2295 DGGRGYDRAEYTLSTAGVNVTLGGAGSGTASDGYGTTDTLISIEGVRGSAFNDTLTGSNA 2354
Query: 286 NNVFF---ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++F GND +G G D Y A + D L+++E
Sbjct: 2355 ADIFESFEGREGNDNINGMGGTDRVVYTASKAGVTVNLATG---TASDGYGGTDSLNNIE 2411
Query: 343 RLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D + LE + L +G D
Sbjct: 2412 DVLGSRDFNDSLTGSAADNKLEGQGGNDTLDGGLGNDSL 2450
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 19/181 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++IY +++ + ++ G D +++ S++ E
Sbjct: 2906 GDDIYDVDIAAD----VIIEQNTEGTDQVNIAFTA---------PGSYTLAAQLEHATVT 2952
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A V +V G+ N+ + G++A N+ +GND G +G DT + Y+I
Sbjct: 2953 AGAGVAVNVTGNELNNRLTGSAAANLLSGLAGNDTLIGGAGSDTLIGGSGDDEYQIDIAS 3012
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ +V +A D + + F ++ + +A + V G + +
Sbjct: 3013 D--VVTEAVGEGLDLVK----IAFTSTAGYTLTANVEEAIVTSAGDTFAVNVTGNTLANA 3066
Query: 383 M 383
+
Sbjct: 3067 L 3067
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL----------TLIGGVKNYIDLNTESWSSIGGYE 257
I T+ G+D + G + L + ++
Sbjct: 868 GGNDTLDGGLGIDTLVGGLGNDFYAIDTLADVVTENPGEGNDGVAVLLAAGATYTLAANV 927
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N I T ++ G++ ++ + GNS NV S+GND G++G DT A S +
Sbjct: 928 ENAGIGNATPGVNLTGNALDNTLQGNSQANVLNGSTGNDALYGNAGNDTLLGGAGSDFLR 987
Query: 318 IYRFENAI 325
++I
Sbjct: 988 GDAGNDSI 995
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL----------TLIGGVKNYIDLNTESWSSIGGYE 257
I T+ G+D + G + L + ++
Sbjct: 1917 GGNDTLDGGLGIDTLVGGLGNDFYAIDTLADVVTENPGEGNDGVAVLLAAGATYTLAANV 1976
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N I T ++ G++ ++ + GNS NV S+GND G++G DT A S +
Sbjct: 1977 ENAGIGNATPGVNLTGNALDNTLQGNSQANVLNGSTGNDALYGNAGNDTLLGGAGSDFLR 2036
Query: 318 IYRFENAI 325
++I
Sbjct: 2037 GDAGNDSI 2044
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+S+ GS GND + G + N+ GND G +G D A +
Sbjct: 3337 GYANTNDSINGSGGNDTLGGAAGNDTLIGGLGNDSLSGDAGADALDGGAGNDRVVGGDGN 3396
Query: 323 NAIIVYDANEHKQDFLSD 340
+ + D LS
Sbjct: 3397 DTLT----GSGGNDTLSG 3410
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 6/105 (5%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV----VGSSGNDVVIGNSANNVFFE 291
G I L + + + K + + VI+++ G++GND + G N+
Sbjct: 2826 NAGTGEDIVLRSIEFIAFADGGKTRSQYWNNVIDNLSNDWTGTAGNDNINGLVGNDTLAG 2885
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+G+D G G D +Y + A ++ + N D
Sbjct: 2886 LAGDDTLIGGPGNDVLIGGPGDDIYDVDIA--ADVIIEQNTEGTD 2928
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 39/127 (30%), Gaps = 10/127 (7%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-- 331
++G+D + G + +GND G +G DT S + + A+
Sbjct: 3515 TAGDDEITGYLGSESLAGLAGNDTIAGGAGNDTLSGGDGSDRLTGGSGADRFVFDTADAL 3574
Query: 332 ---EHKQDFLSDVERLR-----FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ DF+S V+R+ F V L Y + L
Sbjct: 3575 VHADLITDFVSGVDRIALKASVFTGLGSVGDVVGLSDHLSYDSDTGTLAYDADGAGGADG 3634
Query: 384 KHFYEFG 390
F G
Sbjct: 3635 VTFATLG 3641
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 5/136 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N ++ G + T+ ++ + GS+GND + GN+ N+ +G+D G +G D
Sbjct: 934 NATPGVNLTGNALDNTLQGNSQANVLNGSTGNDALYGNAGNDTLLGGAGSDFLRGDAGND 993
Query: 306 TFFYYAPSY-----LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + + N+ + N +D + +
Sbjct: 994 SIDGGVIADRINYTDGNTVSYANSTGAVNVNLSGITGTGSTGTGTASDGLGGTDTLANIF 1053
Query: 361 ILEYTASYEDLIQVIG 376
++ ++ + L+
Sbjct: 1054 YVQGSSQDDTLVGSAA 1069
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 5/136 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N ++ G + T+ ++ + GS+GND + GN+ N+ +G+D G +G D
Sbjct: 1983 NATPGVNLTGNALDNTLQGNSQANVLNGSTGNDALYGNAGNDTLLGGAGSDFLRGDAGND 2042
Query: 306 TFFYYAPSY-----LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + + N+ + N +D + +
Sbjct: 2043 SIDGGVIADRINYTDGNTVSYANSTGAVNVNLSGITGTGSTGTGTASDGLGGTDTLANIF 2102
Query: 361 ILEYTASYEDLIQVIG 376
++ ++ + L+
Sbjct: 2103 YVQGSSQDDTLVGSAA 2118
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 74/221 (33%), Gaps = 38/221 (17%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + +Y + + G G+D +D +I NY D NT S+++ G
Sbjct: 960 NGSTGNDALYGNAGNDTLLGGAGSDFLRGDAGNDSIDGGVIADRINYTDGNTVSYANSTG 1019
Query: 256 YEK-----------------NMTIAQHTVIESVV---GSSGNDVVIGNSANN--VFFESS 293
+ + + ++ GSS +D ++G++A VF +
Sbjct: 1020 AVNVNLSGITGTGSTGTGTASDGLGGTDTLANIFYVQGSSQDDTLVGSAALTLEVFEGRA 1079
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYK-----------IYRFENAIIVYDANEHKQDFLSDVE 342
GND +G + DT + + + A D L ++
Sbjct: 1080 GNDTINGGAITDTLNGENSNRVSYQNAAVAVNVNLATGTATSAADTGAGSDGNDTLININ 1139
Query: 343 RLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++R AD S ++ E A + + G D+
Sbjct: 1140 QVRGSSHADTLTGSDDLVLTEQFEGRAGADTIDGAGGLDLV 1180
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 74/221 (33%), Gaps = 38/221 (17%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + +Y + + G G+D +D +I NY D NT S+++ G
Sbjct: 2009 NGSTGNDALYGNAGNDTLLGGAGSDFLRGDAGNDSIDGGVIADRINYTDGNTVSYANSTG 2068
Query: 256 YEK-----------------NMTIAQHTVIESVV---GSSGNDVVIGNSANN--VFFESS 293
+ + + ++ GSS +D ++G++A VF +
Sbjct: 2069 AVNVNLSGITGTGSTGTGTASDGLGGTDTLANIFYVQGSSQDDTLVGSAALTLEVFEGRA 2128
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYK-----------IYRFENAIIVYDANEHKQDFLSDVE 342
GND +G + DT + + + A D L ++
Sbjct: 2129 GNDTINGGAITDTLNGENSNRVSYQNAAVAVNVNLATGTATSAADTGAGSDGNDTLININ 2188
Query: 343 RLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++R AD S ++ E A + + G D+
Sbjct: 2189 QVRGSSHADTLTGSDDLVLTEQFEGRAGADTIDGAGGLDLV 2229
Score = 41.3 bits (95), Expect = 0.61, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 61/208 (29%), Gaps = 41/208 (19%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT-IAQHTV-------- 267
T+ G D L + G + ID+ ++ + G ++ IA +
Sbjct: 2983 AGNDTLIGGAGSDTL-IGGSGDDEYQIDIASDVVTEAVGEGLDLVKIAFTSTAGYTLTAN 3041
Query: 268 IESVVGSSGNDVV----IGNSANNVFFESSGND------------------VFDGSSGLD 305
+E + +S D GN+ N +G + DG G D
Sbjct: 3042 VEEAIVTSAGDTFAVNVTGNTLANALTGHAGANLLVGLDGDDTLDGGGGNDTLDGGIGSD 3101
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQC--------IDSVNV 356
T Y I R + +S+VE +RFA I +
Sbjct: 3102 TAILQGVLIDYAISRPSTTQTRFTHLPSGNTVVISNVEVIRFAGGGSPQPLADLIARIGS 3161
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMK 384
+L T + L +G D
Sbjct: 3162 PGNDVLNGTGGDDTLAGGLGNDSLSGGA 3189
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 22/56 (39%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
I ++ N+V + GND DG +G DT Y + + + D D
Sbjct: 1491 IVSANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYVVDVAGDVVTEGDGAGSGSD 1546
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 22/56 (39%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
I ++ N+V + GND DG +G DT Y + + + D D
Sbjct: 2540 IVSANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYVVDVAGDVVTEGDGAGSGSD 2595
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I ++ N+V + GND DG +G DT Y + + + D D ++
Sbjct: 1808 IVSANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYFVDVAGDVVTEGDGAGSGSDRVNV 1867
Query: 341 VERLRFADQCIDSVNVKQRSILEYTAS 367
V + NV+ +I TA
Sbjct: 1868 V--FTAGGTYTLAANVENATIANGTAG 1892
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I ++ N+ + GND DG +G DT Y + + + D D ++
Sbjct: 759 IVSANNDSLVGTPGNDTLDGLAGTDTLVGLDGDDTYFVDVAGDVVTEGDGAGSGSDRVNV 818
Query: 341 VERLRFADQCIDSVNVKQRSILEYTAS 367
V + NV+ +I TA
Sbjct: 819 V--FTAGGTYTLAANVENATIANGTAG 843
Score = 38.6 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 63/214 (29%), Gaps = 34/214 (15%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------------DLTLIGGVKNYIDLNT 247
G G+++Y+ + D Q +G D + + TL G +Y DL
Sbjct: 3214 GGAGSDVYQFAIGGGDDIIEQNDPLAGSLDTVVLASPIGGLGSGETTLTRGWHSYDDLVI 3273
Query: 248 ESWSSIGGYE-----------KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN- 295
S G E N I T+ + SGN + + +SG+
Sbjct: 3274 TVNSGTPGAEVVDHLVVHDFLTNDLINLGTIDQIRWLGSGNTLTQTQILAELLKGTSGDD 3333
Query: 296 ---------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
D +GS G DT A I N + DA D + +R+
Sbjct: 3334 WLRGYANTNDSINGSGGNDTL-GGAAGNDTLIGGLGNDSLSGDAGADALDGGAGNDRVVG 3392
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L A + +G
Sbjct: 3393 GDGNDTLTGSGGNDTLSGEAGSDTYAFGLGFGQE 3426
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 59/194 (30%), Gaps = 26/194 (13%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
S +D+ +++L+ N + L +++ G+ + + +
Sbjct: 277 GADPASWVWAQYWDTPQGIIVNLSNGSITANGVTLASKTARDGFGFTDSFVLGAGQLA-- 334
Query: 271 VVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ GS +D + G + + + GND G + DT Y S + + +
Sbjct: 335 IEGSEKDDYIRGRDDRSGWLDGADGNDTIVGGAFADTAAYDNDSDGTDGGIYGAIVNLSA 394
Query: 330 A-----------------------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + D L+ +E + + + + + L
Sbjct: 395 SSITVNGVTGYGSGVTVGSLMARDSFGDTDSLNSIENIFGSARSDFVLGSSGANWLAGNE 454
Query: 367 SYEDLIQVIGQDVF 380
+ L G D
Sbjct: 455 GNDTLDGGAGNDSL 468
Score = 37.4 bits (85), Expect = 8.0, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 25/150 (16%)
Query: 273 GSSGNDVVIGNSA--NNVFFES-----------SGNDVFDGSSGLDTFFYYAPSYLYKIY 319
G+ GND ++G++ ++ SGNDV + G DT P +LY +
Sbjct: 6 GTDGNDTLVGSAGSVDDALNGGLGNDIYRYSLGSGNDVISDTGGADTIELADPLHLYSGW 65
Query: 320 RF--ENAIIVYDANEHKQDFLSD-------VERLRFADQCIDSVNVKQRSILEYTASYED 370
F +V D N Q +++ +E L FAD + ++L T +
Sbjct: 66 NFYRSGDDLVIDFNGQGQLTVTNQFLGAPIIETLAFADGS-ALYSFSFSNLLTGTVGNDV 124
Query: 371 LIQ-VIGQDVFESMKHFYEFGLSEGRDITF 399
LI G+ + FG +EG D F
Sbjct: 125 LIGTSSGEVINGGGGDDLIFG-NEGDDTLF 153
>gi|220920327|ref|YP_002495628.1| hypothetical protein Mnod_0281 [Methylobacterium nodulans ORS 2060]
gi|219944933|gb|ACL55325.1| protein of unknown function DUF839 [Methylobacterium nodulans ORS
2060]
Length = 686
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 5/177 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T++ GDD +D + G N + ++ G + + I
Sbjct: 508 NDSIDGGAGNDTLFGDAGDDRVDGGEGDDVVRGWYGNDTLFGSGGNDAVFGEDGHDFIGA 567
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + V G +GND + G + N++ F ++GND G +G DTF + I F
Sbjct: 568 GSGNDYVSGGAGNDALYGEAGNDLLFGNAGNDELVGGTGSDTFGFGRGDGQDLIRDFTVG 627
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D + ++ A Q + + V + + + D F
Sbjct: 628 GAERDVIAFNGGAFASFAAVQAATQQVGADAVISYGAGDTIRLQNTQLASLTADNFT 684
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 19/194 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ GN+ S I+ + GDD + + G
Sbjct: 467 NGTAGND------SLVGSQIADLIWGNDGDDTIRG-------------AAGDDYLSGLAG 507
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N +I +++ G +G+D V G ++V GND GS G D F
Sbjct: 508 NDSIDGGAGNDTLFGDAGDDRVDGGEGDDVVRGWYGNDTLFGSGGNDAVFGEDGHDFIGA 567
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + N+ + A + +DLI+
Sbjct: 568 GSGNDYVSGGAGNDALYGEAGNDLLFGNAGNDELVGGTGSDTFGFGRGDGQDLIRDFTVG 627
Query: 379 VFESMKHFYEFGLS 392
E + G
Sbjct: 628 GAERDVIAFNGGAF 641
>gi|159029525|emb|CAO87674.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1037
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 58/164 (35%), Gaps = 34/164 (20%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ N+I+K++ + D G G DL+D + +DL +
Sbjct: 638 GTAYNDIFKVDEKTIK-------VDGGEGIDLVDFSN-SSKPITVDL----------VKS 679
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I Q+ IE+ GSS NDV + A N +GND+ G +G DT +
Sbjct: 680 GTGIPQYIKIENFKGSSFNDVFTLDKAANKVEGGNGNDIMIGGAGNDTLDGGLGNDTVDY 739
Query: 319 YRFENAIIVYDANE---------------HKQDFLSDVERLRFA 347
I + D LS +E L+F
Sbjct: 740 SLETTPITLTLVKNPDPKLTGFNGTVKVGSDTDTLSSIETLKFT 783
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 67/190 (35%), Gaps = 36/190 (18%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ N+I+K++ + D G G DL+D + +DL +
Sbjct: 430 GTAYNDIFKVDEKTIK-------VDGGEGIDLVDFSN-SSKPITVDL----------VKS 471
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I Q+ IE+ GSS NDV + A N +GND+ G +G DT +
Sbjct: 472 GTGIPQYIKIENFKGSSFNDVFTLDKAANKVEAGNGNDIMIGGAGNDTLDGGLGNDTVDY 531
Query: 319 YRFENAIIVYDANE---------------HKQDFLSDVERLRFA--DQCIDSVNVKQRSI 361
I + D LS +E L+F D + ++ Q
Sbjct: 532 SLETTPITLTLVKNPDPKLTGFNGTVKVGSDTDTLSSIETLKFTPKDDIVKIQSIPQGVT 591
Query: 362 LEYTASYEDL 371
L+ + L
Sbjct: 592 LDGGEGKDTL 601
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES----VVGSSGND 278
Y + GDD L N IGG ++ ++ E+ ++G GND
Sbjct: 224 YGTDGDDALFANNWTDKTLLFKYNKNGGILIGGRGNDILWGAISLKENNDDLLIGGIGND 283
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE------ 332
+ G N+ GND +G G DT + I +
Sbjct: 284 QLRGFYGNDTLLGGEGNDTLNGGLGHDTLTGGLGIDVADYSSETTPITLTLTKNPDPKLT 343
Query: 333 ---------HKQDFLSDVERLRFA 347
D LS +E L+F
Sbjct: 344 GFNGTVKVGSDTDTLSSIETLKFT 367
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 14/139 (10%)
Query: 208 KIEVQQKDSPF---IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+D F TI GG D+ G K I +N KN+ IA
Sbjct: 843 TFIGTNRDDTFKVDGNTIQVDGGAGKKDILDFAGSKQGIVIND------STRPKNI-IA- 894
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T IE +GS+ ND + G +A+ +F + +G+DV G G D F+ + +Y +
Sbjct: 895 -TNIEEYIGSAYNDRIKGTAADEIFRDGAGDDVIFGGGGNDIFYNGLGNDVYASGESGDQ 953
Query: 325 IIVYD--ANEHKQDFLSDV 341
I + D V
Sbjct: 954 FIFSGNFGKDGIADTKKGV 972
>gi|119485245|ref|ZP_01619630.1| hypothetical protein L8106_07344 [Lyngbya sp. PCC 8106]
gi|119457473|gb|EAW38598.1| hypothetical protein L8106_07344 [Lyngbya sp. PCC 8106]
Length = 632
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 15/138 (10%)
Query: 226 GGDDLL----DLTLIGGVKNYIDLNTESWSS----------IGGYEKNMTIAQHTVIESV 271
GG+D + D LI G + L+ S + G N + + + +
Sbjct: 39 GGNDTVIGATDSELISGNQGADQLSGGVGSDTLVGGTENDLLDGQADNDFLLGDSGADLL 98
Query: 272 VGSSGNDVVIGNSANN-VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G G+D + G + NN + F +GND+ DG G+D ++ + R + +
Sbjct: 99 RGGRGDDQLFGGADNNDILFGDAGNDLLDGGLGIDVVTGGEGIDIFVLARRGADVDFFTD 158
Query: 331 NEHKQDFLSDVERLRFAD 348
E D + + F D
Sbjct: 159 FEDGIDLMQLPTGITFND 176
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 45/116 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I+ + + + G G+D ++G + N++ + ND G SG D
Sbjct: 46 GATDSELISGNQGADQLSGGVGSDTLVGGTENDLLDGQADNDFLLGDSGADLLRGGRGDD 105
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
N I+ DA D ++ + + V ++ + +++ +ED
Sbjct: 106 QLFGGADNNDILFGDAGNDLLDGGLGIDVVTGGEGIDIFVLARRGADVDFFTDFED 161
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ G+ NDV++G+S NN GNDV G G D F Y P I +A
Sbjct: 489 NATGTDFNDVLVGSSTNNTIEGRRGNDVVTGGGGADLFSYATPDAGVDIISDFDAT 544
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 39/114 (34%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+ GND VIG + + + + G D G G DT + L + ++
Sbjct: 35 VIALGGNDTVIGATDSELISGNQGADQLSGGVGSDTLVGGTENDLLDGQADNDFLLGDSG 94
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D + AD +L+ + + G D+F +
Sbjct: 95 ADLLRGGRGDDQLFGGADNNDILFGDAGNDLLDGGLGIDVVTGGEGIDIFVLAR 148
>gi|114570054|ref|YP_756734.1| cadherin [Maricaulis maris MCS10]
gi|114340516|gb|ABI65796.1| Cadherin [Maricaulis maris MCS10]
Length = 1421
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 17/144 (11%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQT-------------IYDSGGDDLLDLTLIGGVKN 241
Y AP + G+N Y I + D + I + G D LD T +
Sbjct: 398 YEAPADADGDNTYDITILASDGTQTSSHVVTITVTNENDVITGTAGADTLDGTNGSDTIH 457
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+D + + G N T+ +++ G SG+D++ G S ++ G+D +G
Sbjct: 458 GLDGDDT----LNGLGGNDTLNGDGGNDTLDGGSGSDILNGGSGDDRLDGGLGSDTLNGG 513
Query: 302 SGLDTFFYYAPSYLYKIYRFENAI 325
+G DTF Y S +
Sbjct: 514 NGHDTFVYSGASGDGADAMHGGSG 537
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
NN QTI + G D LD T + + E ++ G
Sbjct: 716 STFTTNNFDGYNPDGSPIAG-QTITGTAGADTLDGTNGSDTIHGL----EGDDTLNGLGG 770
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T+ +++ G SG+D++ G S ++ G+D +G +G DTF Y S
Sbjct: 771 NDTLNGDGGNDTLDGGSGSDILNGGSGDDRLDGGLGSDTLNGGNGHDTFVYSGASGDGAD 830
Query: 319 YRFENAI 325
+
Sbjct: 831 AMHGGSG 837
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
NN QTI + G D LD T + + E ++ G
Sbjct: 1016 STFTTNNFDGYNPDGSPIAG-QTITGTAGADTLDGTNGSDTIHGL----EGDDTLNGLGG 1070
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T+ +++ G SG+D++ G S ++ G+D +G +G DTF Y S
Sbjct: 1071 NDTLNGDGGNDTLDGGSGSDILNGGSGDDRLDGGLGSDTLNGGNGHDTFVYSGASGDGAD 1130
Query: 319 YRFENAI 325
+
Sbjct: 1131 AMHGGSG 1137
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G DN + +F + S F + G +A Q I G +
Sbjct: 700 GGDNWSDLITFQNTTASTFTTNNFDGYNPDGSP--------IAGQTITGTAGADTLDGT- 750
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHT 266
T+ GG+D L+ L+ S S I G + +
Sbjct: 751 NGSDTIHGLEGDDTLNGLGGNDTLNGDGGNDT-----LDGGSGSDILNGGSGDDRLDGGL 805
Query: 267 VIESVVGSSGNDVVI----GNSANNVFFESSGNDVFD----------------GSSGLDT 306
+++ G +G+D + + SG+D F G +G D
Sbjct: 806 GSDTLNGGNGHDTFVYSGASGDGADAMHGGSGDDTFSIINPDAPGGAAFLTITGGTGNDH 865
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
A + + + + ++
Sbjct: 866 LEVLATHLNGVSFDAGDGDDHAEIRAGRAQTIT 898
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 59/213 (27%), Gaps = 35/213 (16%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G DN + +F + S F + G +A Q I G +
Sbjct: 1000 GGDNWSDLITFQNTTASTFTTNNFDGYNPDGSP--------IAGQTITGTAGADTLDGT- 1050
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHT 266
T+ GG+D L+ L+ S S I G + +
Sbjct: 1051 NGSDTIHGLEGDDTLNGLGGNDTLNGDGGNDT-----LDGGSGSDILNGGSGDDRLDGGL 1105
Query: 267 VIESVVGSSGNDVVI----GNSANNVFFESSGNDVFD----------------GSSGLDT 306
+++ G +G+D + + SG+D F G +G D
Sbjct: 1106 GSDTLNGGNGHDTFVYSGASGDGADAMHGGSGDDTFSIINPDAPGGAAFLTITGGTGNDH 1165
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
A + + + + ++
Sbjct: 1166 LEVLATHLNGVSFDAGDGDDHAEIRAGRAQTIT 1198
>gi|330808169|ref|YP_004352631.1| hypothetical protein PSEBR_a1432 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376277|gb|AEA67627.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 2855
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 56/181 (30%), Gaps = 9/181 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + N Y++ + + + D G G +D++ ++ ++ G
Sbjct: 2532 GGNSNAAEN--YQLTMTVNYAGAQDSTPDYHGSYTASDNHGGSDSAAVDISYQAGHTLTG 2589
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + GND++ S NN +GND+ +G D +
Sbjct: 2590 TVGDDVLLAGNGDNILNAGDGNDILSAGSGNNTLHGGAGNDLLYSGAGNDLLDGGTGNDT 2649
Query: 316 YKIYRFENAIIV-------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ V + D L+ +E L ++ + + +
Sbjct: 2650 ASYAHASAGVTVNLGLLAAQNTVGAGTDTLTGIENLVGSNFNDTLTGDGASNRINGGLGH 2709
Query: 369 E 369
+
Sbjct: 2710 D 2710
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 80/240 (33%), Gaps = 40/240 (16%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT--PMVSDIVAVQKIY 195
N P G N EN +V +Y QDS D Y A+ SD AV Y
Sbjct: 2523 HVTNIPNPGGGNSNAAENYQLTMTV-NYAGAQDSTPDYHGSYTASDNHGGSDSAAVDISY 2581
Query: 196 GAP---KGSLGNNIY---------------------KIEVQQKDSPFIQTIYDSGGDDLL 231
A G++G+++ +Y G+DLL
Sbjct: 2582 QAGHTLTGTVGDDVLLAGNGDNILNAGDGNDILSAGSGNNTLHGGAGNDLLYSGAGNDLL 2641
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT----VIESVVGSSGNDVVIGNSANN 287
D +Y + ++G T+ T IE++VGS+ ND + G+ A+N
Sbjct: 2642 DGGTGNDTASYAHASAGVTVNLGLLAAQNTVGAGTDTLTGIENLVGSNFNDTLTGDGASN 2701
Query: 288 VFFESSGNDVFDGSS---------GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
G+DV +G G +T + + ++ + V D L
Sbjct: 2702 RINGGLGHDVLNGGGGDDLLIGGPGNNTLTGGSGADTFQWQAGNSGHDVITDFAPGVDKL 2761
>gi|114640098|ref|XP_001153881.1| PREDICTED: stromelysin-2 isoform 4 [Pan troglodytes]
Length = 476
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 57/195 (29%), Gaps = 48/195 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNHTPDLPR-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D + G+ Y + +I+FD + W GT L A HE
Sbjct: 161 SFAVKEHGDF-YSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHE 218
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + +M Y + A F D
Sbjct: 219 LGHSLGLFHSANTEA-------------------LM-YPLYNSFTELAQFRLSQ----DD 254
Query: 188 IVAVQKIYGAPKGSL 202
+ +Q +YG P S
Sbjct: 255 VNGIQSLYGPPPAST 269
>gi|254437418|ref|ZP_05050912.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198252864|gb|EDY77178.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 588
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 54/179 (30%), Gaps = 12/179 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI- 268
+ T+Y G D + +DL + S A VI
Sbjct: 241 NDILRGGAGADTLYGGEGVDWVQYIG-SPEGVTVDLTVDG-SGFQSASGGD--ATGDVIS 296
Query: 269 --ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
E VVGS D + GN N +GND G +G D F + + +
Sbjct: 297 GFERVVGSDHADTLTGNDEGNYLIGGAGNDTLIGGAGADALFGGSGIDIASYATSATGLT 356
Query: 327 VYDANEHKQ-----DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V D +E L + V ++LE + LI G DV
Sbjct: 357 VRLDGTGSTGNALGDTFDGIENLIGSGGDDLLVGDAGANVLEGGNGDDTLIGGSGADVM 415
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 12/174 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ G +D+ + + + S G + IE
Sbjct: 325 NDTLIGGAGADALFGGSG---IDIASYATSATGLTVRLDGTGSTGNALGDTF----DGIE 377
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++GS G+D+++G++ NV +G+D G SG D + +
Sbjct: 378 NLIGSGGDDLLVGDAGANVLEGGNGDDTLIGGSGADVMHGQSGDDTVTYADSATGVGARR 437
Query: 330 A-----NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + VE L + V ++++ + + G D
Sbjct: 438 DGLVGWGGAAGDEIFTVENLIGSAHKDTLVGSNGANVIDSGGGGGTIFALGGDD 491
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-----------LYKI 318
++ G+SGN+ +IG S +V +GND+ G +G DT + +
Sbjct: 216 TLTGTSGNNTLIGTSELDVLSGLNGNDILRGGAGADTLYGGEGVDWVQYIGSPEGVTVDL 275
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D +S ER+ +D + + L A + LI G D
Sbjct: 276 TVDGSGFQSASGGDATGDVISGFERVVGSDHADTLTGNDEGNYLIGGAGNDTLIGGAGAD 335
Query: 379 VF 380
Sbjct: 336 AL 337
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IESVVGSSGN 277
T+ G D++ Y D T + G A + +E+++GS+
Sbjct: 404 DTLIGGSGADVMHGQSGDDTVTYADSATGVGARRDGLVGWGGAAGDEIFTVENLIGSAHK 463
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D ++G++ NV G G DT + + + + I D+ D
Sbjct: 464 DTLVGSNGANVIDSGGGGGTIFALGGDDTLIGGSGADVMHGQSGNDTFIFSDS--FGADQ 521
Query: 338 LSDVE 342
++D E
Sbjct: 522 ITDFE 526
>gi|327269122|ref|XP_003219344.1| PREDICTED: matrix metalloproteinase-20-like [Anolis carolinensis]
Length = 484
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 16/141 (11%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNNG 87
++K + LT + + + + L WS L F +T+ +DI N
Sbjct: 114 KWKKNTLTYRVKKYTPSLSHAEVDKAVEMGLKAWSAAAPLNFVKTTSGEADIMISFENGD 173
Query: 88 YVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + +D + +FD A+ W G+ G L A HE GHALGL
Sbjct: 174 HGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN-GFNLFTVAAHEFGHALGL 232
Query: 135 MHPGSYNG-GYPVYGVDNDYE 154
H + YP Y + +
Sbjct: 233 AHSADPSALMYPTYKYQHPFG 253
>gi|316970759|gb|EFV54635.1| acyl-protein thioesterase 1 [Trichinella spiralis]
Length = 488
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 27/135 (20%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+D+ F + H D + G + + RY +++FD + W G L A
Sbjct: 39 IDIAFLQ-QNHGDGE-PFDGQGGILAHAFFPRYGGDVHFDDDEYWTPEPNSGVDLYAVAA 96
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HEIGH+LGL H + N + Y +S +
Sbjct: 97 HEIGHSLGLKHSKNRNALMAPF-----------------YQTYSNSGIHLHN-------- 131
Query: 186 SDIVAVQKIYGAPKG 200
DI A+Q +YG +
Sbjct: 132 DDIQALQYLYGTEEA 146
>gi|291195937|gb|ADD84682.1| matrix metalloproteinase 13 [Ictalurus punctatus]
Length = 471
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 63/190 (33%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W+ + Y+ + T + E++ + Q AL W++V L F+
Sbjct: 110 WTTNSLTYRIENYT---PDMSVAEVDHSIQR----ALQVWARVTPLKFKRIYSGIADIMI 162
Query: 73 ---TSIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D NG++ + + +FD + + + +G L A HE
Sbjct: 163 SFVVGDHRDGSPFDGPNGFLAHAFFPGVGIGGDAHFDDDETFSFRSTRGYNLFLVAAHEF 222
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + SY P ++ D+
Sbjct: 223 GHSLGLEHSNVPGA---------------LMYPTYSYTNPDTFVLPR----------DDV 257
Query: 189 VAVQKIYGAP 198
+Q +YG+
Sbjct: 258 KRIQALYGSN 267
>gi|307151488|ref|YP_003886872.1| peptidase S8 and S53 subtilisin kexin sedolisin [Cyanothece sp. PCC
7822]
gi|306981716|gb|ADN13597.1| peptidase S8 and S53 subtilisin kexin sedolisin [Cyanothece sp. PCC
7822]
Length = 1265
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 19/195 (9%)
Query: 202 LGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYI-------DLNT 247
+ +Y + +Y S G+D L TL G N + DL
Sbjct: 1064 SNDQLYGDQGNDILNGDAGNDALYGSTGNDTLSGGVGRDTLYGNENNDLLNGDDDHDLLY 1123
Query: 248 ESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + + G N T+ + + + G + ND + GN N+ + GND G G D
Sbjct: 1124 GNQDNDTLNGGNGNDTLYGNEGSDILNGGNNNDSLYGNEGNDTLNGAEGNDTLRGGEGND 1183
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
++ + + + D QD L L FA + + + +++ T
Sbjct: 1184 LLTGGLDKDVFVLAANFGSDTITD-FMDGQDKLGLSAGLSFA--QLTLTSNQSNTLIYLT 1240
Query: 366 ASYEDLIQVIGQDVF 380
+S E L + G ++
Sbjct: 1241 SSNELLATLSGINLS 1255
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 69/178 (38%), Gaps = 18/178 (10%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+N+Y E + GG+D L + ++ N + G + N ++
Sbjct: 940 DNLYGKEDNDVLNG-------GGGNDNL---YGNEGNDELNGNEGKD-YLEGNQGNDSLN 988
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++++G+ GND + G + N+ + + GND+ +G G D + K +
Sbjct: 989 GGSESDNLLGNEGNDTLKGGTHNDTLWGNQGNDILNGDEGNDLLYGNEGQDTLKGGSNND 1048
Query: 324 AIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQD 378
+ D LS E + DQ D +N + Y + + L +G+D
Sbjct: 1049 TLY----GNEDNDLLSGDESNDQLYGDQGNDILNGDAGNDALYGSTGNDTLSGGVGRD 1102
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 11/178 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
K T++ + G+D+L+ G N + E ++ G N T+ + +
Sbjct: 1002 NDTLKGGTHNDTLWGNQGNDILN----GDEGNDLLYGNEGQDTLKGGSNNDTLYGNEDND 1057
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G ND + G+ N++ +GND GS+G DT + N
Sbjct: 1058 LLSGDESNDQLYGDQGNDILNGDAGNDALYGSTGNDTLSGGVGRDTL----YGNENNDLL 1113
Query: 330 ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D L D + L + + IL + + L G D +
Sbjct: 1114 NGDDDHDLLYGNQDNDTLNGGNGNDTLYGNEGSDILNGGNNNDSLYGNEGNDTLNGAE 1171
>gi|281341730|gb|EFB17314.1| hypothetical protein PANDA_011001 [Ailuropoda melanoleuca]
Length = 479
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 64/189 (33%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + L WS+V LTF +TS +DI
Sbjct: 73 WGRYNLTYRIVNYTPDMTRADV-------DEAIQNGLEVWSRVTPLTFAKTSKGIADIMI 125
Query: 82 ISSNNGYVCTPRYDSRYFM--------------EINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 126 AFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 184
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D + + D
Sbjct: 185 FGHALGLSHSND-------------------QTALM---FPNYVSLDPNKYPLSQ---DD 219
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 220 ISGIQSIYG 228
>gi|23308683|ref|NP_694423.1| matrix metalloproteinase-21 precursor [Mus musculus]
gi|50401063|sp|Q8K3F2|MMP21_MOUSE RecName: Full=Matrix metalloproteinase-21; Short=MMP-21; Flags:
Precursor
gi|22252944|gb|AAM94032.1| matrix metalloproteinase-21 [Mus musculus]
gi|22854900|gb|AAN09805.1| matrix metalloproteinase 21 [Mus musculus]
gi|76827853|gb|AAI06862.1| Matrix metallopeptidase 21 [Mus musculus]
gi|148685821|gb|EDL17768.1| matrix metallopeptidase 21 [Mus musculus]
Length = 568
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 78/211 (36%), Gaps = 48/211 (22%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDI------TELN-PNAQEVARWALGEWSKVVDLTFEE 72
D + + L++ + ++L+ + + R A WS+V L F E
Sbjct: 155 DGQQEDASDTGASRAFSKKTLTWRLVGDAYSSQLSGDEQRYIFRLAFRMWSEVTPLDFRE 214
Query: 73 --TSIHS--DIKFISSNNGYVCTPRYDSRY---------FMEINFDKADVWRY-GIGKGT 118
T+ + DIK ++ PR EI+FD + + G
Sbjct: 215 DRTAPGTMVDIKLGFGRGRHLGCPRVFDGSGQEFAHAWRLGEIHFDDDEHFTPLSSDTGI 274
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HEIGH LGL P +Y G S+M P + +F
Sbjct: 275 SLLKVAVHEIGHVLGL--PHTYRVG-----------------SIM---QPNYIPQEPAFE 312
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+D A+Q++YG+ KGS + ++
Sbjct: 313 ----LDWADRKAIQRLYGSCKGSF-DTVFDW 338
>gi|1708215|sp|P55118|LKA11_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|397992|gb|AAB36689.1| LktA [Mannheimia haemolytica]
Length = 953
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGKDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 819
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGKDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDIITDSDGNDKLSFSDSN 812
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 96/301 (31%), Gaps = 23/301 (7%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T + F +N D+ + + V + G G + + EI
Sbjct: 572 TDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIVAKLGAGDDNVFVGSGTTEIDGGE 631
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G Y +D E + +V + ++ + + + A + + ++
Sbjct: 632 GYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEGTSTHTA-LVGNREEKIE 690
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + G Y + K ++ I + +D+ + N D +
Sbjct: 691 YRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFNDAFNGGD----GVDT 740
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-----------SSGNDVFDGS 301
I G + N + + + G +G+D + G N++ GND+ S
Sbjct: 741 IDGKDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDIITDS 800
Query: 302 SGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D F + + ++ +++ ++ + K FA + + K
Sbjct: 801 DGNDKLSFSDSNLKDLTFEKVKHNLVITNSRKEKVTIQDWFREADFAKEVRNYKATKDEK 860
Query: 361 I 361
I
Sbjct: 861 I 861
>gi|225706878|gb|ACO09285.1| Collagenase 3 precursor [Osmerus mordax]
Length = 470
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 60/194 (30%), Gaps = 51/194 (26%)
Query: 23 WSNYFIRYKPDVLTT--HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
W + Y+ T D + AL W+KV LTF S ++DI
Sbjct: 106 WQTNQLTYRIVNYTPDMSASEVDFS---------IEKALQVWAKVSPLTFTRIYSGNADI 156
Query: 80 -------------KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
F + + +FD+ + + +G +G L A H
Sbjct: 157 MVSFGGREHGDFYPFDGPDGTLAHAFAPSPGIGGDAHFDEDETFTFGSSRGYNLFMVAAH 216
Query: 127 EIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E GH++GL H YP+Y Y P ++
Sbjct: 217 EFGHSMGLSHSNDVGALMYPIY---------------QGYNDPNTYVLPR---------- 251
Query: 186 SDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 252 DDVNGIQSLYGPNS 265
>gi|148653163|ref|YP_001280256.1| hypothetical protein PsycPRwf_1361 [Psychrobacter sp. PRwf-1]
gi|148572247|gb|ABQ94306.1| hypothetical protein PsycPRwf_1361 [Psychrobacter sp. PRwf-1]
Length = 2329
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 85/271 (31%), Gaps = 41/271 (15%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK--GTILSHNA 124
DLTF + ++ +S G + + D ++ I G
Sbjct: 1972 DLTFTAVADPVEMTAQNS-AGQAYEWVELNTNIKMTDDDGSETLTLTIAPAAGKPFQDTM 2030
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
L IG + G + + + D S +
Sbjct: 2031 LFRIG-----------DDGTVMGLNNASADADGVAIS--------FDGTNYRLTGIPADK 2071
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
V+DI + Y G Y + D + + G L+L+ N
Sbjct: 2072 VNDIQILSHDY------SGEVTYTTQSVETSNDDASAEVV----GTANLNLS------NS 2115
Query: 243 IDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+++NT + + I G N I + + G +GND + G ++ + GND+ +G
Sbjct: 2116 VEINTGAQNDTITGGNGNDVINAGAGDDVIYGKAGNDTINGGEDDDDLKGAEGNDILNGG 2175
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+G DT + E+ + N+
Sbjct: 2176 AGDDTLRGGSGDDYLDGGAGEDGLYGDTDND 2206
>gi|330971035|gb|EGH71101.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 1610
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 327 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G S +++ +G D G +G DTF + +
Sbjct: 387 TEGNDVITGGAAHEQIFGLAGKDTLSGGSGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 47/145 (32%), Gaps = 6/145 (4%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
N + + D G+D + L + LNT + + GG
Sbjct: 1390 NSSGAANATGNALDNLIYAGAGDNVMDGRDGNDTVSY-LFATAGVTVALNTSAQQATGG- 1447
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + T E+++GS D + GN N GND G +G D + +
Sbjct: 1448 -SGLDTLKGT--ENLIGSQFADTLTGNKNANTLSGGDGNDTLSGGAGDDVLIGGSGADTL 1504
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV 341
+ + ++ L D+
Sbjct: 1505 IGGTGADHYVFNGISDTGLGGLRDI 1529
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 256 YEKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N+T T E+ G+ GND ++G ++ +G D+ +G +G D + A
Sbjct: 785 NVGNVTPGILTGTENAEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRDALYGGAD 844
Query: 313 SYLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ + ++ YDA D + D
Sbjct: 845 ADTFVYSALTDSYRDYDAGGLTATDTIYDF 874
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G K+ A H + + VV G++G D + G N+V ++G D DG +G DT
Sbjct: 514 GLSGNLKDTLNASHFIFQHVVEGTAGGDTLTGTDGNDVLNGNAGTDRIDGGAGADTITGG 573
Query: 311 APSYLYKIYRFENAII 326
A + + I
Sbjct: 574 ADADTLTGGAGADLFI 589
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 1227 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + +++ A+ L G D+
Sbjct: 1287 VSSVSWTLGANVENLVLTGVSAINGTGNAVKNVIIGNANNNILDGAAGADMLTG 1340
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 70/196 (35%), Gaps = 13/196 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ ++ Q D G D D+ ++ + + + +S S +
Sbjct: 1226 GHIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDT 1285
Query: 256 YEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ +E+ + +GN +V+IGN+ NN+ ++G D+ G G D
Sbjct: 1286 VVSSVSWTLGANVENLVLTGVSAINGTGNAVKNVIIGNANNNILDGAAGADMLTGGDGSD 1345
Query: 306 TFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+++ + + + ++ +++E L + L
Sbjct: 1346 SYYVDDAADRVVETNTDAQVGGVDTVYSSLASYTLGANLENLVINSSGAANATGNALDNL 1405
Query: 363 EYTASYEDLIQVIGQD 378
Y + ++++ +
Sbjct: 1406 IYAGAGDNVMDGRDGN 1421
>gi|163794873|ref|ZP_02188842.1| calcium binding hemolysin protein, putative [alpha proteobacterium
BAL199]
gi|159179692|gb|EDP64219.1| calcium binding hemolysin protein, putative [alpha proteobacterium
BAL199]
Length = 690
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GGDDL+ + G ID + + +G ++ I T +S+VG+ G+D + G++
Sbjct: 329 TGGDDLIGWSAAGL---RIDAGAGADTILGSEYRDYIIG-GTGADSLVGNGGDDTLQGDA 384
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
N+V + +G+DV DG +G DT + + L+ I
Sbjct: 385 GNDVLYGGAGDDVLDGGAGADTLYGGEGNDLFVIRVENGTA 425
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 30/148 (20%)
Query: 200 GSLGNNIYKI------------EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKN 241
G+ G++ + F T+ G+D + D+ G +
Sbjct: 80 GTAGDDTFSFGETAVGMKAADGNDVITTGGFADTLSGGDGNDTISSGDGADIVSGGNGND 139
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN-----------SANNVFF 290
I+ S ++ G + TI + + G +GNDV++G+ +A++
Sbjct: 140 RINAGQGSD-TVHGGAGDDTIDGGAGADLLSGGAGNDVLLGSGGQKNTGVNESAADDTLV 198
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+GND G G D + + I
Sbjct: 199 GGAGNDTLYGGGGNDLYRFSRGDGSDFI 226
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 7/124 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYID----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSG 276
I + GDD D + T ++ + G + N TI+ + V G +G
Sbjct: 78 IDGTAGDDTFSFGETAVGMKAADGNDVITTGGFADTLSGGDGNDTISSGDGADIVSGGNG 137
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + ++ +G+D DG +G D A + + + D
Sbjct: 138 NDRINAGQGSDTVHGGAGDDTIDGGAGADLLSGGAGNDV--LLGSGGQKNTGVNESAADD 195
Query: 337 FLSD 340
L
Sbjct: 196 TLVG 199
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 65/204 (31%), Gaps = 28/204 (13%)
Query: 197 APKGSLGNNIYKIEVQQKD------SPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDL 245
+ G Y +D +P+ T+ + GDD +D + GG+ N + +
Sbjct: 492 PTVTTAGGVTYTDIAFSEDGDGSGPTPYNDTLTGTPGDDTIDALAGDDVVFGGLGNDVLI 551
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
G E N ++ +++VG +G+D + G+ ++ GND+ G SG D
Sbjct: 552 ---------GGEGNDALSGSYGNDTLVGGTGDDTLFGSLDDDQISGGDGNDLLIGGSGND 602
Query: 306 TFFYYAPSYL-----YKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVK 357
T A D L + L A
Sbjct: 603 TLSGGAGDDTLLADDGDDVADGGDGNDLALGAAGDDLLIGGNGDDTLDGAGGNDTLSGGA 662
Query: 358 QRSILEYTASYEDLIQVIGQDVFE 381
IL + ++ G D+
Sbjct: 663 GDDILGGVDGDDSVLGGAGNDLLA 686
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 9/134 (6%)
Query: 190 AVQKIYGAPK---GSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
A+ YG G+ + ++ + Q + G+D L GG +
Sbjct: 558 ALSGSYGNDTLVGGTGDDTLFGSLDDDQISGGDGNDLLIGGSGNDTLS----GGAGDDTL 613
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + G + N + ++G +G+D + G N+ +G+D+ G G
Sbjct: 614 LADDGDDVADGGDGNDLALGAAGDDLLIGGNGDDTLDGAGGNDTLSGGAGDDILGGVDGD 673
Query: 305 DTFFYYAPSYLYKI 318
D+ A + L
Sbjct: 674 DSVLGGAGNDLLAT 687
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 6/141 (4%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTES----WSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ G + ++ G + I T + ++ I E +++ G+ G+D
Sbjct: 472 NGDGIPDVSFSIDGAYHSVIPTVTTAGGVTYTDIAFSEDGDGSGPTPYNDTLTGTPGDDT 531
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ + ++V F GNDV G G D + + ++ + + Q
Sbjct: 532 IDALAGDDVVFGGLGNDVLIGGEGNDALSGSYGND--TLVGGTGDDTLFGSLDDDQISGG 589
Query: 340 DVERLRFADQCIDSVNVKQRS 360
D L D+++
Sbjct: 590 DGNDLLIGGSGNDTLSGGAGD 610
>gi|329849044|ref|ZP_08264072.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844107|gb|EGF93676.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1276
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 75/192 (39%), Gaps = 12/192 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +Y GG+D L L G N + L+ W ++ G N T+
Sbjct: 488 DDMVTGGAGASFLYGDGGNDSLTGGTGQNILWAGDGNDLLLSVGGWGTMLGEAGNDTLTG 547
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
V+++++G GND++ G + +++ +GND+ +G +G D Y
Sbjct: 548 SDVVDTMIGGQGNDLLSGGAGDDILNGDAGNDITNGGAGNDLIHAYEGVDTVDGGD-GLD 606
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS----YEDLIQVIGQDVF 380
+ A + L DV ++ A S + R++ S + LI +G D F
Sbjct: 607 TVNMGAPDGANGVLVDVTQISTAAGVTFSNGMVLRNVEVLLLSASGGNDTLIGGVGNDTF 666
Query: 381 ESMK--HFYEFG 390
+ + E G
Sbjct: 667 NAGGGNDWVEGG 678
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 65/182 (35%), Gaps = 17/182 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
SGG+D L IGGV N N + G + N ++ SSGND + GN
Sbjct: 651 SGGNDTL----IGGVGND-TFNAGGGNDWVEGGDGNDSLTGGDYFSEW--SSGNDTMAGN 703
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-------NEHKQD 336
S +++ G+D+ G G DT A + A+ V A D
Sbjct: 704 SGDDILNGFDGDDLIQGGIGADTLQGGAGEDTVSYADIDVAVTVDLAVEVAQAMGGAGND 763
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
LS +E + + L+ + L+ G D ++ LSEG
Sbjct: 764 SLSQIEHVVGTSAGDWLGGTTGDNRLDGGLGNDTLMGRAGNDTYFVQAAGDRVSENLSEG 823
Query: 395 RD 396
D
Sbjct: 824 TD 825
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 35/94 (37%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++ I G + N ++ V + + G+ GND + G +++ +G+D G G D+
Sbjct: 18 PDEFNMISGEDGNDSLTGGAVGDYIWGNEGNDTLTGAGGDDLLMGIAGDDRLTGGLGNDS 77
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + +D +
Sbjct: 78 LWDGGADDAGNDTLEGGEGGDSLVSYGGRDVIDG 111
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 16/170 (9%)
Query: 221 TIYDSGGDDLLDLTLI------GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ GG+D + GG + + + I G N T+A + G
Sbjct: 426 AVFSGGGNDTYTGGGLNDEFWGGGGADLATSGADGYDVIYGEAGNDTVAGGGGRNELHGG 485
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D+V G + + + GND G +G + + A + + E
Sbjct: 486 EGDDMVTGGAGASFLYGDGGNDSLTGGTGQNILW--AGDGNDLLLSVGGWGTML--GEAG 541
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L+ +D + + +L A + L G D+
Sbjct: 542 NDTLTG------SDVVDTMIGGQGNDLLSGGAGDDILNGDAGNDITNGGA 585
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 13/129 (10%)
Query: 265 HTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T +E+ + SG+ GN A N + GN++ DG G DT + Y + +
Sbjct: 916 GTNVENLALAGSGHFTATGNVAANRMSGNGGNNLLDGLGGNDTLIGGLGNDSYVVDSSGD 975
Query: 324 AIIVYDANEHKQDFL---------SDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQ 373
+V + D + +++E L F+ + ++L + L
Sbjct: 976 --VVTENASEGTDSIVASLNWNLSANIENLTFSGAANLVGHGNGLGNVLNGNSGNNWLEG 1033
Query: 374 VIGQDVFES 382
G D
Sbjct: 1034 AAGNDTLSG 1042
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 66/190 (34%), Gaps = 12/190 (6%)
Query: 199 KGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN+I + T+ G D +++ G + ++ S+ G
Sbjct: 573 NGDAGNDITNGGAGNDLIHAYEGVDTVDGGDGLDTVNMGAPDGANGVL-VDVTQISTAAG 631
Query: 256 YE-KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + ++ + + S GND +IG N+ F GND +G G D+
Sbjct: 632 VTFSNGMVLRNVEVLLLSASGGNDTLIGGVGNDTFNAGGGNDWVEGGDGNDSLTGG---D 688
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + N + A D L+ + Q + Q E T SY D+
Sbjct: 689 YFSEWSSGNDTM---AGNSGDDILNGFDGDDLI-QGGIGADTLQGGAGEDTVSYADIDVA 744
Query: 375 IGQDVFESMK 384
+ D+ +
Sbjct: 745 VTVDLAVEVA 754
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG + G + L + + G + N T+ +++ G +GND +IG+S
Sbjct: 168 TGGVSGDNFRGGSGADSLSGL--LGYDRLEGGDGNDTVDGGEGYDNIFGGAGNDSLIGDS 225
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
++ G+D G +G D A L + + + D N+
Sbjct: 226 GHDELQGDDGHDRLKGDAGDDRLNAGAGDDLVEGGTGLDVLTGGDGND 273
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 67/197 (34%), Gaps = 22/197 (11%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT------IAQHTVIESV 271
T+ G+D G + +L+ + S + N++ T
Sbjct: 794 GNDTLMGRAGNDTY-FVQAAGDRVSENLSEGTDSVVASLNWNLSANVENLTFTGTGNFVG 852
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+ +V+IGN NN ++GND G G DTF A + ++ ++ +
Sbjct: 853 NGNGMGNVLIGNIGNNWLEGAAGNDTLSGGLGNDTFVIDAEDVVTELEGQGADWVLALRS 912
Query: 332 EHKQDFLSDVERLRFADQCIDSV----------NVKQRSILEYTASYEDLIQVIGQDV-- 379
++VE L A + ++L+ + LI +G D
Sbjct: 913 YVLG---TNVENLALAGSGHFTATGNVAANRMSGNGGNNLLDGLGGNDTLIGGLGNDSYV 969
Query: 380 FESMKHFYEFGLSEGRD 396
+S SEG D
Sbjct: 970 VDSSGDVVTENASEGTD 986
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 31/90 (34%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + T + G GND + G + + + + GND G+ G D A
Sbjct: 6 YNGTPGDDTYVGPDEFNMISGEDGNDSLTGGAVGDYIWGNEGNDTLTGAGGDDLLMGIAG 65
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+++ A++ D L E
Sbjct: 66 DDRLTGGLGNDSLWDGGADDAGNDTLEGGE 95
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 58/215 (26%), Gaps = 52/215 (24%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVK-----------------------------------NY 242
+++D G DD + TL GG +
Sbjct: 74 GNDSLWDGGADDAGNDTLEGGEGGDSLVSYGGRDVIDGGSDSDNLHLDRSTSTFSFHLSM 133
Query: 243 IDLNTES---------------WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DL +S+ GY N T+ ++ G SG D + G +
Sbjct: 134 ADLTAAGDHVLADGTLVRNIEYFSAALGY-GNDTLTGGVSGDNFRGGSGADSLSGLLGYD 192
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
GND DG G D F A + I + + D + + +RL
Sbjct: 193 RLEGGDGNDTVDGGEGYDNIFGGAGNDSL-IGDSGHDELQGDDGHDRLKGDAGDDRLNAG 251
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+L + L G DV
Sbjct: 252 AGDDLVEGGTGLDVLTGGDGNDTLNGGAGNDVMSG 286
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 62/216 (28%), Gaps = 24/216 (11%)
Query: 199 KGSLGNNIY------------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
G+ G++ Y I+ + G+D L T GG + +
Sbjct: 7 NGTPGDDTYVGPDEFNMISGEDGNDSLTGGAVGDYIWGNEGNDTL--TGAGGDDLLMGI- 63
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G N ++ +GND + G + G DV DG S D
Sbjct: 64 -AGDDRLTGGLGNDSLWDG-----GADDAGNDTLEGGEGGDSLVSYGGRDVIDGGSDSDN 117
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEY- 364
+ + + + + L ++E A + S +
Sbjct: 118 LHLDRSTSTFSFHLSMADLTAAGDHVLADGTLVRNIEYFSAALGYGNDTLTGGVSGDNFR 177
Query: 365 -TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + L ++G D E EG D F
Sbjct: 178 GGSGADSLSGLLGYDRLEGGDGNDTVDGGEGYDNIF 213
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 71/251 (28%), Gaps = 47/251 (18%)
Query: 167 MPQDSMMDASFGYCATPMVSDIVA--VQKIYGAPKGSLG---NNIYKIEVQQ-------K 214
++ + G M + VA +Q YG + G + +Y + +
Sbjct: 302 QWGNTGITFDGGAGNDTMTASAVAETLQGGYGNDVINAGGGNDFLYGDQGEADAGIDVMN 361
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-----NTESWSS--IGGYEKNMTIAQHTV 267
+Y GG D +D G +Y+ L N + + +A TV
Sbjct: 362 GDGGNDVVYSYGGADTIDG---GADNDYVTLFRRGANQGLTVDAVLAATAGGVVLADGTV 418
Query: 268 IESV-----VGSSGNDVVIGNSANNVFFES-------------------SGNDVFDGSSG 303
+++V GND G N+ F+ +GND G G
Sbjct: 419 LQNVENLAVFSGGGNDTYTGGGLNDEFWGGGGADLATSGADGYDVIYGEAGNDTVAGGGG 478
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + + + D + L D ++V +
Sbjct: 479 RNELHGGEGDDMVT-GGAGASFLYGDGGNDSLTGGTGQNILWAGDGNDLLLSVGGWGTML 537
Query: 364 YTASYEDLIQV 374
A + L
Sbjct: 538 GEAGNDTLTGS 548
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 13/139 (9%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT--ESWSSIGGYEKNMTIAQHTVIESV 271
+ + + G+D L+ V + D N E N I
Sbjct: 258 EGGTGLDVLTGGDGNDTLNGGAGNDVMSGGDGNDLLEDLEGEDAQWGNTGITFD------ 311
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----YRFENAIIV 327
G +GND + ++ GNDV + G D + I N ++
Sbjct: 312 -GGAGNDTMTASAVAETLQGGYGNDVINAGGGNDFLYGDQGEADAGIDVMNGDGGNDVVY 370
Query: 328 YDANEHKQDFLSDVERLRF 346
D +D + +
Sbjct: 371 SYGGADTIDGGADNDYVTL 389
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 5/132 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ +N+T + + GN V+ GNS NN ++GND G G DTF A
Sbjct: 995 NLSANIENLTFSGAANLVGHGNGLGN-VLNGNSGNNWLEGAAGNDTLSGGLGNDTFVIDA 1053
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYED 370
+ ++ ++ + ++VE L F +I+ +
Sbjct: 1054 EDVVTELEGQGADWVLASRSYVLG---ANVENLAFGGAGNFTGNGNAANNIISGNSGNNW 1110
Query: 371 LIQVIGQDVFES 382
L +G D
Sbjct: 1111 LDGGVGNDTLTG 1122
Score = 40.9 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++ N+++ GNS NN GND G G D + + N ++ +
Sbjct: 1092 TGNGNAANNIISGNSGNNWLDGGVGNDTLTGGLGNDVLVVDGDDVVVEAANGGNDWVLAN 1151
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + +E L F+ + N +
Sbjct: 1152 RSFNLGGH---IEHLAFSGTGNFTGNGNAGN 1179
>gi|85704270|ref|ZP_01035373.1| extracellular nuclease [Roseovarius sp. 217]
gi|85671590|gb|EAQ26448.1| extracellular nuclease [Roseovarius sp. 217]
Length = 1682
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 8/121 (6%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L G K I L + G N + + + + G +G D + G+ N+ +G
Sbjct: 18 LNGTDKRDILLGFGGDDILSGGGGNDLLLAGSGNDILDGGTGQDALHGDRGNDSLAGGAG 77
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAI--------IVYDANEHKQDFLSDVERLRF 346
+D G G DT Y Y+I + + D L+ VE L F
Sbjct: 78 DDFLSGGRGFDTAVYQGGIDDYQISVRGGWFGRTATVSSVTATVADAGHDRLTGVEALYF 137
Query: 347 A 347
A
Sbjct: 138 A 138
Score = 40.5 bits (93), Expect = 0.97, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 5/82 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+ ++V+ G ++ G+D+ G G D + + + ++A+
Sbjct: 9 AFGTQKSNVLNGTDKRDILLGFGGDDILSGGGGNDLLLAGSGNDILDGGTGQDALHGDRG 68
Query: 331 NEH-----KQDFLSDVERLRFA 347
N+ DFLS A
Sbjct: 69 NDSLAGGAGDDFLSGGRGFDTA 90
>gi|89053858|ref|YP_509309.1| hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
gi|88863407|gb|ABD54284.1| Hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
Length = 757
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 50/123 (40%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
D+ + T+ D+ L D +L GG N + + G + + + ++
Sbjct: 577 DDGDDTAYAGTMDDTVNGGLGDDSLFGGTGNDVLHGDSGRDVLNGQDGDDALYGDMDNDA 636
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GND + G + N+ +G+D DG +G DT F A + ++ + D
Sbjct: 637 LNGGLGNDTLSGGTGNDALDGGAGSDFLDGGAGDDTLFGNADADVFGFDAGHGHDTIGDF 696
Query: 331 NEH 333
+
Sbjct: 697 DAQ 699
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 65/208 (31%), Gaps = 33/208 (15%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI-------DLNTES 249
+ +Y + + GG+D L TL GG + + DL
Sbjct: 518 DTVYGTDGADWIDGGNGNDLLAGEGGNDTLIGGGSADTLNGGAGDDMLHGNWGRDLINGD 577
Query: 250 WSSIGGYEK--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG---------NDVF 298
Y + T+ +S+ G +GNDV+ G+S +V G ND
Sbjct: 578 DGDDTAYAGTMDDTVNGGLGDDSLFGGTGNDVLHGDSGRDVLNGQDGDDALYGDMDNDAL 637
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+G G DT + A + D L AD
Sbjct: 638 NGGLGNDTLSGGTGNDALD----GGAGSDFLDGGAGDDTLFGNAD---ADVFGFDAGHGH 690
Query: 359 RSILEYTASYE-DLIQVIGQDVFESMKH 385
+I ++ A + ++I + G F S
Sbjct: 691 DTIGDFDAQNDLEVIDLSGVGRFNSFDD 718
>gi|37726917|gb|AAO63002.1| collagenase 3 [Necturus maculosus]
Length = 216
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 61/193 (31%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHS 77
R+ W Y + Y+ + T ++ + A WS+V L F S +
Sbjct: 15 RNLKWPTYNVTYRIENYTPDMTHAEV-------DRAIKKAFRVWSEVTPLNFTRLRSGTA 67
Query: 78 DIKFISS---NNGYVCTPRYDS----------RYFMEINFDKADVWRYGIGKGTILSHNA 124
DI + + D + +FD + + G KG L A
Sbjct: 68 DIMISFGRREHGDFYPFDGPDGLLAHAFPPGKGIGGDTHFDDDETFTSG-SKGYNLFIVA 126
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GHALGL H S + V SY P ++
Sbjct: 127 AHEFGHALGLDHSRDPG---------------SLMFPVYSYTEPSKFLLP---------- 161
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 162 DDDVQGIQSLYGP 174
>gi|7160624|emb|CAB76450.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
parapertussis]
Length = 1706
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G+D +D + G L+ +
Sbjct: 1454 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRG-----LDAGAKGV 1500
Query: 250 WSSIGGYEKNMTIAQHT-----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS +DV+IG++ NV +GNDV G +G
Sbjct: 1501 FLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGD 1560
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + +N
Sbjct: 1561 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAG 1616
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1617 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1646
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 1010 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 1069
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 1070 DLGVWSNQLDGGAGVDTVKY 1089
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 32/166 (19%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-- 304
+++ G + T+ + + G GND++ G++ N+ + G+D +G +G
Sbjct: 1272 DAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDW 1331
Query: 305 ---------DTFFYYAPSYLYKIYRFENAIIVYD---------------------ANEHK 334
D A + V A
Sbjct: 1332 FGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSA 1391
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D +S +E + + Q ++L + L G DV
Sbjct: 1392 YDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVL 1437
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 20/152 (13%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D + + + DL+
Sbjct: 1179 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEG 1238
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D G G D F
Sbjct: 1239 -WVRKAARRGMGYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLF 1297
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + +A D L
Sbjct: 1298 GGDGNDML----YGDAGNDTLYGGLGDDTLEG 1325
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1135 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1194
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD V R + Y S
Sbjct: 1195 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYYDSV 1254
Query: 369 EDLIQVIGQDVFESM 383
+ VIG + + +
Sbjct: 1255 RSVENVIGTSMKDVL 1269
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 1304 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 1357
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 1358 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 1415
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 1416 ANVLRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 1474
Query: 328 YDANEHKQDF 337
D +
Sbjct: 1475 LDGGDGNDTV 1484
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 14/144 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 1063 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 1122
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 1123 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLG--LD 1179
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
+Y + I +E D +
Sbjct: 1180 TLYGEDGNDIFLQDDETVSDDIDG 1203
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 1021 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 1080
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 1081 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 1140
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 1141 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 1172
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 1015 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 1074
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 1075 SNQLDGGAGVDTV 1087
>gi|89053557|ref|YP_509008.1| hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
gi|88863106|gb|ABD53983.1| Hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
Length = 950
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 1/130 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY+ N TI+ +++ G G+D + G S N+ GND G G DT +
Sbjct: 139 IYGYDGNDTISGGAGNDTIDGEDGDDSIDGGSGNDSLSGGGGNDTIQGGDGRDTIDGGSG 198
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ I + D + +++ D ++ A + +
Sbjct: 199 NDSID-GGGDSDTISGGSGADTIDGGAGDDQISGGDGADVITGGTGDDTIDGGAGADVIH 257
Query: 373 QVIGQDVFES 382
G D +
Sbjct: 258 GNDGDDSLDG 267
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 54/184 (29%), Gaps = 13/184 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y TI GDD +D +L GG N + +I G N +
Sbjct: 142 YDGNDTISGGAGNDTIDGEDGDDSIDGGSGNDSLSGGGGNDTIQGGDGRDTIDGGSGNDS 201
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I +++ G SG D + G + ++ G DV G +G DT A +
Sbjct: 202 IDGGGDSDTISGGSGADTIDGGAGDDQISGGDGADVITGGTGDDTIDGGAGAD----VIH 257
Query: 322 ENAIIVYDANEHKQDFLSDVE----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
N D + + L D V L+ T + G
Sbjct: 258 GNDGDDSLDGGTGDDTIHGGDGSDTILLGDDGNSGRTKVNAGDNLQGTTGQDAYEWAGGA 317
Query: 378 DVFE 381
Sbjct: 318 GNSA 321
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 48/162 (29%), Gaps = 35/162 (21%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLI------GGVKNYIDLNTESWSSIGGYEKNMT 261
+ TI G+D +D G + ID I G +
Sbjct: 179 GGNDTIQGGDGRDTIDGGSGNDSIDGGGDSDTISGGSGADTIDGGAGDDQ-ISGGDGADV 237
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-------------------- 301
I T +++ G +G DV+ GN ++ +G+D G
Sbjct: 238 ITGGTGDDTIDGGAGADVIHGNDGDDSLDGGTGDDTIHGGDGSDTILLGDDGNSGRTKVN 297
Query: 302 --------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+G D + + + + RF + D++
Sbjct: 298 AGDNLQGTTGQDAYEWAGGAGNSAVIRFNLSATAGDSDGLAD 339
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 45/144 (31%), Gaps = 31/144 (21%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS------- 274
I + G+D ++ SI G + N IA + V S
Sbjct: 548 IMANDGNDTIEGGAGDDDIEG----GGGADSIDGGDGNDFIAGYDVAGLAANSERVNTDD 603
Query: 275 SGNDVVIGNSA------------------NNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
ND + G + N+ +GND G G DTF Y L
Sbjct: 604 GANDTLSGGAGEDTLLGGAGDDDLDGGADNDTLKGGTGNDSLTGGDGDDTFVYNVGDGLD 663
Query: 317 KIYRF--ENAIIVYDANEHKQDFL 338
I F N+ + D + DF+
Sbjct: 664 TITDFNAGNSGDLGDGDPTNNDFI 687
>gi|11602643|emb|CAA85481.2| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 1705
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G+D +D + G L+ +
Sbjct: 1453 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRG-----LDAGAKGV 1499
Query: 250 WSSIGGYEKNMTIAQHT-----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS +DV+IG++ NV +GNDV G +G
Sbjct: 1500 FLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGD 1559
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + +N
Sbjct: 1560 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAG 1615
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1616 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1645
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 1009 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 1068
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 1069 DLGVWSNQLDGGAGVDTVKY 1088
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S G D D V++ ++ S IG + N + Q
Sbjct: 1226 YGFGIEADLSEGWVRKAARRGMDYYD-----SVRSVENVIGTSMKDVLIGDAQANTLMGQ 1280
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 1281 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWF 1331
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 15/194 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 1062 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 1121
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 1122 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLG--LD 1178
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D K + EY E DL +
Sbjct: 1179 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGW 1238
Query: 376 GQDVFESMKHFYEF 389
+ +Y+
Sbjct: 1239 VRKAARRGMDYYDS 1252
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1134 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1193
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD V R ++Y S
Sbjct: 1194 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 1253
Query: 369 EDLIQVIGQDVFESM 383
+ VIG + + +
Sbjct: 1254 RSVENVIGTSMKDVL 1268
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 1303 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 1356
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 1357 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 1414
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 1415 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 1473
Query: 328 YDANEHKQDF 337
D +
Sbjct: 1474 LDGGDGNDTV 1483
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 1020 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 1079
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 1080 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 1139
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 1140 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 1171
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 1014 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 1073
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 1074 SNQLDGGAGVDTV 1086
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 58/207 (28%), Gaps = 33/207 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D + + + DL+
Sbjct: 1178 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEG 1237
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D T
Sbjct: 1238 -WVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVR 1287
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
L F + D L D ++ +
Sbjct: 1288 GGDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREH 1339
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ L G D + + G++ GR
Sbjct: 1340 DVLRGGAGVDTVDYSQAGAHAGVATGR 1366
>gi|330878914|gb|EGH13063.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 620
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 6/147 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D + L + LNT + + GG + + T E++ GS D + GN
Sbjct: 429 DGNDTVSY-LFASAGVTVALNTSAQQATGG--SGLDTLKGT--ENLTGSQFADSLTGNKN 483
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NV GND G +G D + + + + +E +D L D+
Sbjct: 484 ANVLHGGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNSIDEVGRDGLRDI-ING 542
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLI 372
F D ++ T S++
Sbjct: 543 FKVGEGDKLDFTGFDARPLTDSHDAFT 569
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 29/89 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N++ G D G G D + + +
Sbjct: 237 NIFGTSDDDTLVGSAGNDILDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 296
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ ++VE L
Sbjct: 297 VSSVSWTLGANVENLLLTGVSAIDGTGNA 325
>gi|71733215|ref|YP_273694.1| poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71553768|gb|AAZ32979.1| Poly(beta-D-mannuronate) C5 epimerase 3 (Mannuronanepimerase 3)
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 1610
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 9/171 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G +G D + +
Sbjct: 1452 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGGSGADTLIGGTG 1509
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + ++NE L D+ F D ++ T +++ +
Sbjct: 1510 ADRYVFNNSNETGLGGLRDI-INGFKAAEGDKLDFTGFDARPLTDAHDAFV 1559
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMIFGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ +V D
Sbjct: 447 YRTATTSATDLVTD 460
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G G+D + G++ ++ +G D G G DTF Y A + Y+ Y
Sbjct: 810 DTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSALTDSYRDYDAGG----L 865
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A + DF +++ + + + L
Sbjct: 866 TATDTIYDFTPGQDKIDVSALGFLGLGNGEDHTLY 900
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N+T T E+ G+ G+D ++G ++ +G D+ +G +G D + +
Sbjct: 786 VGNVTPGVLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGA 845
Query: 314 YLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ ++ YDA D + D
Sbjct: 846 DTFVYSALTDSYRDYDAGGLTATDTIYDF 874
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + ++++ AS L G D+
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTG 1340
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 1223 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTE 1275
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + +GN +V+ GN++NNV ++G
Sbjct: 1276 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGA 1335
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 1336 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 1395
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 1396 NATGNTLDNLIYAGAGDNVMDGRDGN 1421
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GNDV+ GN+ + +G D+ +G + D A + L+ ++ Y
Sbjct: 541 DTLTGTDGNDVMNGNAGTDRVNGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY 600
Query: 329 DANEHKQ-DFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYED 370
A+ KQ D ++D +R+ + + + + + Y + D
Sbjct: 601 TASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
>gi|67924501|ref|ZP_00517922.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
gi|67853648|gb|EAM48986.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
Length = 287
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 11/151 (7%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
PF I + GDD L T + +D + I N + + + G G
Sbjct: 22 PFYHPISGTPGDDFLIGTSKNDFISGLDGDD----DIFALGGNDLVRGGDGNDYISGGDG 77
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI------IVYDA 330
ND++ G+ ++ +GND F GS G D F A +I I+
Sbjct: 78 NDLLYGDGGDDTISGGNGNDTFYGSEGDDIFEGEAGKDTVNYSSLGQSITLLPTGIIQKG 137
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
D L +VER+ AD + + +
Sbjct: 138 GGFGTDTLVEVERI-IADASASNNTIDTSTA 167
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI--ESVVGSSGNDVVIGNSA 285
++ +D + G +++N ++ + + TVI + +G++ +D + G+S
Sbjct: 159 NNTIDTS-TAGAPVSVNVNLQNQALTVNNIPFVGTLTRTVINFDDFIGTNQSDTITGDSQ 217
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-----DANEHKQDFLSD 340
+N + GND F G+ G D + + +I + + D L
Sbjct: 218 DNQLIANGGNDTFFGTGGNDLVDGGSGNDTVNYGSLGQSITLLPTGTVEKGSLGTDQLVL 277
Query: 341 VERLRFA 347
VE +
Sbjct: 278 VETIIAD 284
>gi|326914450|ref|XP_003203538.1| PREDICTED: stromelysin-1-like [Meleagris gallopavo]
Length = 483
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 61/190 (32%), Gaps = 51/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W+ + Y+ T D+ + A WS V L F + +DI
Sbjct: 106 WAKQVLTYRILNYTPDLRPADVN-------AAIKKAFSIWSSVTPLKFIKKDRGDADIMI 158
Query: 82 ISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ G+ +D + +FD+ + W +GT L + A HE
Sbjct: 159 SFATGGHNDFIPFDGPGGSVAHAYAPGKDIGGDTHFDEDETWTKST-EGTNLFYVAAHEF 217
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM-VS 186
GH+LGL H N YPVY F P+
Sbjct: 218 GHSLGLFHSKDPNALMYPVYR---------------------------KFDPSVFPLHQD 250
Query: 187 DIVAVQKIYG 196
DI +Q +YG
Sbjct: 251 DINGIQSLYG 260
>gi|326388165|ref|ZP_08209768.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Novosphingobium nitrogenifigens DSM 19370]
gi|326207331|gb|EGD58145.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Novosphingobium nitrogenifigens DSM 19370]
Length = 527
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 8/139 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G+ N TI + + G +GND++ G + + SGND+ G +G D +
Sbjct: 360 IHGWGGNDTIYGDGGADKLNGDNGNDILFGGAGTDELRGGSGNDILVGGTGKDVLYGGKG 419
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER--LRFADQCIDSVNVKQRSILEYTASYED 370
+ + + A D ++D D NV + + + +
Sbjct: 420 ADSFYFVAGDTGKTRVTA-----DVIADFNHAEHDIIDLSAIDTNVSRGGLQPFKFIGDA 474
Query: 371 LIQVIGQDVFESMKHFYEF 389
GQ + + H+
Sbjct: 475 AFSASGQQIAGEL-HYVHA 492
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 11/117 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G++ +DV+ G ++ GND G G D + + F A
Sbjct: 340 DKLNGTAQDDVIAGLKGADIIHGWGGNDTIYGDGGADKLNGDNGNDIL----FGGAGTDE 395
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D L D + + + Y + + + DV H
Sbjct: 396 LRGGSGNDILVG-------GTGKDVLYGGKGADSFYFVAGDTGKTRVTADVIADFNH 445
>gi|170023074|ref|YP_001719579.1| virulence determinant [Yersinia pseudotuberculosis YPIII]
gi|169749608|gb|ACA67126.1| virulence determinant [Yersinia pseudotuberculosis YPIII]
Length = 3110
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAAASKSHILSGGEGNDTVALGEVLGNEIDSIIDISKGYYSQV 2232
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYL 315
Sbjct: 2291 GLAQ 2294
Score = 44.7 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2594 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2650
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2651 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2699
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2700 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2754
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2755 VEDSQITFDELFSLRPYSD 2773
>gi|33866939|ref|NP_898498.1| putative hemolysin-type calcium-binding protein; HlyA
[Synechococcus sp. WH 8102]
gi|33639540|emb|CAE08924.1| putative hemolysin-type calcium-binding protein; similar to HlyA
[Synechococcus sp. WH 8102]
Length = 281
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 30/177 (16%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ I +I+ G D L S +N I +
Sbjct: 134 TPGNKEIVSIWGGKGKDT--------------LKGGFGSDYLNGGQNDDI--------IK 171
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G D + G S ++ G+D G +G DT S ++ I IV D +
Sbjct: 172 GNEGRDTLFGGSGSDKLTGGIGDDYVKGGAGNDTLIGGKGSDIFDI---GEGDIVKDFSP 228
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ DF+ E D+ ++ S +S DL +I ++ + F
Sbjct: 229 RENDFIYIDE-----DKYGTNIKASDTSEGVILSSGTDLEALIAGASAFVVRMYLNF 280
>gi|330889632|gb|EGH22293.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
mori str. 301020]
Length = 1610
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 9/171 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G +G D + +
Sbjct: 1452 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGGSGADTLIGGTG 1509
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + ++NE L D+ F D ++ T +++ +
Sbjct: 1510 ADRYVFNNSNETGLGGLRDI-INGFKAAEGDKLDFTGFDARPLTDAHDAFV 1559
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ +V D
Sbjct: 447 YRTATTSATDLVTD 460
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G G+D + G++ ++ +G D G G DTF Y A + Y+ Y
Sbjct: 810 DTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSALTDSYRDYDAGG----L 865
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A + DF +++ + + + L
Sbjct: 866 TATDTIYDFTPGQDKIDVSALGFLGLGNGEDHTLY 900
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N+T T E+ G+ G+D ++G ++ +G D+ +G +G D + +
Sbjct: 786 VGNVTPGVLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGA 845
Query: 314 YLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ ++ YDA D + D
Sbjct: 846 DTFVYSALTDSYRDYDAGGLTATDTIYDF 874
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADNMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + ++++ AS L G D+
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTG 1340
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 5/118 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G T+ + + GS+G D + G + ++ + D+ G +G D F Y +
Sbjct: 534 IEGTAGGDTLTGTDGNDVMNGSAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSR 593
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y+ Y ++ DF +R+ + + + + + Y + D
Sbjct: 594 LDSYRNYNASG----TKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 1223 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADNMTGGDGNDIYVVDNALDTVTE 1275
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + +GN +V+ GN++NNV ++G
Sbjct: 1276 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGA 1335
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 1336 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 1395
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 1396 NATGNTLDNLIYAGAGDNVMDGRDGN 1421
>gi|254669521|emb|CBA03460.1| putative calcium binding hemolysin protein [Neisseria meningitidis
alpha153]
Length = 1056
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 380 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 437
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 438 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 475
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 476 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 533
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 534 GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 581
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 75/228 (32%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+++ + + G++ Y+
Sbjct: 180 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQS 237
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 238 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 275
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND +G G DT A + + + +
Sbjct: 276 TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 333
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 334 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 381
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 77/228 (33%), Gaps = 37/228 (16%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 580 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 637
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 638 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 675
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V + GND +G G DT A + + + +
Sbjct: 676 TLNGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 733
Query: 330 ANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYED 370
QD + + + +RF D + R +D
Sbjct: 734 GEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKD 781
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 780 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 837
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 838 GNTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 875
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 876 TLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 933
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 934 GKGFGQDTVYN 944
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 840 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGE 899
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 900 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 959
Query: 390 GLS 392
+
Sbjct: 960 KAA 962
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++V G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 87 ADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYD 146
Query: 323 NAIIVYDANEHKQDFLSD 340
A D +D
Sbjct: 147 YATGRKDIIRFTDGITAD 164
>gi|13937105|gb|AAK50051.1|AF363361_1 RTX toxin IA [Actinobacillus pleuropneumoniae]
Length = 1022
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 85/257 (33%), Gaps = 33/257 (12%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + I+ G+D L +GG N + + + + G + +
Sbjct: 743 DDEIYGNDGHDILYGDDGNDVIHGGDGNDHL----VGGNGNDRLIGGKGNNFLNGGDGDD 798
Query: 261 TI-AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ ++G +GND++ G+ N+F GND G G D + Y + I
Sbjct: 799 ELQVFECQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEYGRHIII 858
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ DV +R D + + + L Y Y
Sbjct: 859 EKGGDDDTLLLSDLS---FKDVGFIRIGDDLLVNKRIGGT--LYYHEDY--------NGN 905
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
++K +++ G EG + + + D Y+T GR +
Sbjct: 906 ALTIKDWFKEG-KEG------------QNNKVEKIVDKDGAYVLSQYLTELTAPGRGINY 952
Query: 440 FKALEYIASHEDLINAF 456
F LE + + NA
Sbjct: 953 FNGLEEKLYYGEGYNAL 969
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D + GN +++ + GNDV G G D + + N +
Sbjct: 735 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 794
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D ++ Q F L ++ + + + +G+D+
Sbjct: 795 DGDDELQVFECQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDI 845
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GNDV+ G N+ +GND G G +
Sbjct: 737 FHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGDG 796
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+++ + +++ A + I Y+ Y
Sbjct: 797 DDELQVFECQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEY 852
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ ++F + G+D G+ G D + + + + ++
Sbjct: 716 VEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVG 775
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFES 382
+ N+ L D + + Q ++L A + L G ++F+
Sbjct: 776 GNGNDRLIGG-KGNNFLNGGDGDDELQVFECQYNVLLGGAGNDILYGSDGTNLFDG 830
>gi|47212184|emb|CAF95132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 710
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 21/132 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + ++ S + + + +AL WS + L F E + +DI+
Sbjct: 195 WKKRHLSWRVRSFPKDSPSLGRDTV----RALMHYALKVWSDIAPLDFHEVAGSDADIQI 250
Query: 82 IS------------SNNGYVCTPRYDSRYF--MEINFDKADVWRYGI--GKGTILSHNAL 125
G V + F + +FD + W + G L A+
Sbjct: 251 DFTKADHRDGYPFDGPGGTVAHAFFPGEKFTAGDTHFDDDEAWTFRSPEADGMDLFAVAV 310
Query: 126 HEIGHALGLMHP 137
HE GHA+GL+H
Sbjct: 311 HEFGHAIGLVHA 322
>gi|99078019|ref|YP_611277.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
gi|99035157|gb|ABF62015.1| Hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
Length = 1043
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
IY G+D +L G N E ++ + +++ T +S+V + GND +
Sbjct: 546 IYGGAGND----SLTTGAGNDTLFGGEGDDTLRNSVGDDSLSGGTGNDSIVATDGNDTLD 601
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQDFL 338
G S N+ + + ND+ G +G D + A + ++I F N IV + QD +
Sbjct: 602 GGSGNDTMYGGNDNDLLIGGTGADLMYGEADADTFRIEDNFGNDTIVGGEAGNDQDVV 659
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 64/203 (31%), Gaps = 31/203 (15%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ G+D L D +L+GGV + + TE ++ G + N T+ +S+
Sbjct: 434 GNDTLLGGEGNDTLHNSAGDDSLVGGVGDDSIVATEGNDTLEGGDGNDTLYAGVDNDSLD 493
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT------------------FFYYAPSY 314
G GND + G + +++ F G D +G G DT + A +
Sbjct: 494 GGLGNDSMFGEAGSDIMFGGGGMDYMEGGIGNDTIDGGDDDDTILGGDGDDLIYGGAGND 553
Query: 315 LYKIYR-----FENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTA 366
F N D LS + + D +
Sbjct: 554 SLTTGAGNDTLFGGEGDDTLRNSVGDDSLSGGTGNDSIVATDGNDTLDGGSGNDTMYGGN 613
Query: 367 SYEDLIQVIGQDVFESMKHFYEF 389
+ LI G D+ F
Sbjct: 614 DNDLLIGGTGADLMYGEADADTF 636
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 6/180 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+Y +D LD ++ G + I + G N TI
Sbjct: 471 NDTLEGGDGNDTLYAGVDNDSLDGGLGNDSMFGEAGSDIMFGGGGMDYMEGGIGNDTIDG 530
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++++G G+D++ G + N+ +GND G G DT ++
Sbjct: 531 GDDDDTILGGDGDDLIYGGAGNDSLTTGAGNDTLFGGEGDDTLRNSVGDDSLSGGTGNDS 590
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
I+ D N D S + + + + ++ A + +
Sbjct: 591 IVATDGN-DTLDGGSGNDTMYGGNDNDLLIGGTGADLMYGEADADTFRIEDNFGNDTIVG 649
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 13/156 (8%)
Query: 194 IYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN----T 247
+YG L G + + D+ + I D+ G+D + G ++ +DL+
Sbjct: 609 MYGGNDNDLLIGGTGADLMYGEADADTFR-IEDNFGNDTIVGGEAGNDQDVVDLSYMTGP 667
Query: 248 ESWSSIGGYEKNMTIAQHTV----IESVVGSSGNDVVIG--NSANNVFFESSGNDVFDGS 301
+ + G +T T+ IE ++ + +DVV ++A SGND G
Sbjct: 668 VTVTYTGPEAGTITDGTDTIQFSEIEELILTDQDDVVDARNDTAGVQINAGSGNDSLTGG 727
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
SG D F A L + + D + + D
Sbjct: 728 SGDDVFTGGAGDDLISLTASGGVDQITDFDINDTDV 763
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
V+G G+D + G+ ++V G+D +G G DT
Sbjct: 104 VLGGDGDDSLTGSRDDDVVMGGRGHDSVEGGEGNDTLMGD 143
>gi|109127347|ref|XP_001091146.1| PREDICTED: matrix metalloproteinase-25 [Macaca mulatta]
Length = 562
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 68/210 (32%), Gaps = 50/210 (23%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETS 74
+ L W + ++ ++L+ + + +AL W DLTF E
Sbjct: 108 YALSGSVWKKRTLTWRVRSFPQS------SQLSQETVRVLMNYALMAWGMESDLTFHEVD 161
Query: 75 IHS----DI------KFISSNNGYVCTPRYDSRYF--------MEINFDKADVWRYGI-- 114
DI F + + + F + +FD + W +G
Sbjct: 162 SSQGQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHFDDEETWTFGSTD 221
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G+GT L A+HE GHALGL H + N S+M F
Sbjct: 222 GEGTDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQGPVGNP 262
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D +Q++YG + +
Sbjct: 263 DKYRLSP----DDRDGLQQLYGKAPQTPYD 288
>gi|113475637|ref|YP_721698.1| peptidase-like protein [Trichodesmium erythraeum IMS101]
gi|110166685|gb|ABG51225.1| peptidase-like [Trichodesmium erythraeum IMS101]
Length = 1594
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G+N++ +D+ T+ GGDD L N I + + G +
Sbjct: 10 SGTPGDNVW---PLSEDNSCNDTLNGRGGDDKL----YASQGNDILYGGDGDDKLYGQQG 62
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + + + G+ G D + GN + G D +G +G DT A
Sbjct: 63 NDKLYGEQGNDRLYGNGGRDRLYGNGGCDRLHGGRGKDTLNGGAGNDTLNGGAGKD 118
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 1/99 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GD++ L+ + ++ + + N + + + G GND + G N
Sbjct: 14 GDNVWPLSEDNSCNDTLNGRGGDDK-LYASQGNDILYGGDGDDKLYGQQGNDKLYGEQGN 72
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G D G+ G D + +
Sbjct: 73 DRLYGNGGRDRLYGNGGCDRLHGGRGKDTLNGGAGNDTL 111
>gi|109082872|ref|XP_001100232.1| PREDICTED: matrix metalloproteinase-14-like [Macaca mulatta]
Length = 582
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 45/157 (28%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W I + T + E R A W L F E
Sbjct: 119 WQYNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIG--KGT 118
H D G++ + + +FD A+ W G G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVGNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|72382573|ref|YP_291928.1| hypothetical protein PMN2A_0734 [Prochlorococcus marinus str. NATL2A]
gi|72002423|gb|AAZ58225.1| hypothetical protein PMN2A_0734 [Prochlorococcus marinus str. NATL2A]
Length = 1821
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-- 331
G+D + G ++ F G+D DG G D FY YK R ++ + + D
Sbjct: 1553 DDGDDRLEGGETSDKIFGGLGSDFIDGGEGEDVAFYAGNFADYKFDRTKDTVAIQDQREG 1612
Query: 332 -EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D L +VE ++FADQ +D + + YT +D
Sbjct: 1613 LNDGNDTLKNVEYIQFADQKVDVSKLDV--VKTYTGDSKDF 1651
>gi|66047050|ref|YP_236891.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. syringae B728a]
gi|63257757|gb|AAY38853.1| Hemolysin-type calcium-binding region:Putative Ig [Pseudomonas
syringae pv. syringae B728a]
Length = 1610
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 327 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G S +++ +G D G +G DTF + +
Sbjct: 387 TEGNDVITGGAAHEQIFGLAGKDTLNGGSGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 47/145 (32%), Gaps = 6/145 (4%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
N + + D G+D + L + LNT + + GG
Sbjct: 1390 NSSGAANATGNALDNLIYAGAGDNVMDGRDGNDTVSY-LFATAGVTVALNTSAQQATGG- 1447
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + T E+++GS D + GN N GND G +G D + +
Sbjct: 1448 -SGLDTLKGT--ENLIGSQFADTLTGNKNANTLSGGDGNDTLSGGAGDDVLIGGSGADTL 1504
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV 341
+ + ++ L D+
Sbjct: 1505 IGGTGADHYVFNGISDTGLGGLRDI 1529
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 256 YEKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N+T T E+ G+ GND ++G ++ +G D+ +G +G D + A
Sbjct: 785 NVGNVTPGILTGTENAEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRDALYGGAD 844
Query: 313 SYLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ + ++ YDA D + D
Sbjct: 845 ADTFVYSALTDSYRDYDAGGLTATDTIYDF 874
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G K+ A H + + VV G++G D + G N+V ++G D DG +G DT
Sbjct: 514 GLSGNLKDTLNASHFIFQHVVEGTAGGDTLTGTDGNDVLNGNAGTDRIDGGAGADTITGG 573
Query: 311 APSYLYKIYRFENAII 326
A + + I
Sbjct: 574 ADADTLTGGAGADLFI 589
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 1227 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + +++ AS L G D+
Sbjct: 1287 VSSVSWTLGANVENLVLTGVSAINGIGNAVKNVIIGNASNNILDGAAGADMLTG 1340
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 70/196 (35%), Gaps = 13/196 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ ++ Q D G D D+ ++ + + + +S S +
Sbjct: 1226 GHIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDT 1285
Query: 256 YEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ +E+ + GN +V+IGN++NN+ ++G D+ G G D
Sbjct: 1286 VVSSVSWTLGANVENLVLTGVSAINGIGNAVKNVIIGNASNNILDGAAGADMLTGGDGSD 1345
Query: 306 TFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+++ + + + ++ +++E L + L
Sbjct: 1346 SYYVDDAADRVVETNTDAQVGGVDTVYSSLASYTLGANLENLVINSSGAANATGNALDNL 1405
Query: 363 EYTASYEDLIQVIGQD 378
Y + ++++ +
Sbjct: 1406 IYAGAGDNVMDGRDGN 1421
>gi|304394379|ref|ZP_07376302.1| rhizobiocin RzcA [Ahrensia sp. R2A130]
gi|303293819|gb|EFL88196.1| rhizobiocin RzcA [Ahrensia sp. R2A130]
Length = 7333
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 74/224 (33%), Gaps = 21/224 (9%)
Query: 230 LLDLTLIGGVKNYIDLNTES--WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DLTL+G DL + +I G + + +++ G SGND + ++
Sbjct: 4627 TYDLTLVGSDVT--DLIEGTSDAETITGLAGDDLLVALGGNDTIDGGSGNDTIRAGDGDD 4684
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL--- 344
V G D DG G DT + + + + + D ++VE L
Sbjct: 4685 VIIGGDGADTIDGGDGYDTVDF---ADSNTGVNADLESRIGRGGHAQGDVYTNVEALLGT 4741
Query: 345 RFADQCIDSVNV------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++AD S L+ + +DL G DV +G
Sbjct: 4742 QYADTLGGSTGDERLVGNDGDDTLDGRSGNDDLSGGKGDDVLTGGDGADVIAGGDGN--- 4798
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRNPDAFK 441
D+ Y S + + + A + H T E AF
Sbjct: 4799 -DTASYELSAEAVSVSLQNGTAAGSDAHGDTLTSIENLTGSAFN 4841
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 67/218 (30%), Gaps = 36/218 (16%)
Query: 200 GSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIG-------------GVKNYI 243
G GN+ + TI G D +D G
Sbjct: 4670 GGSGNDTIRAGDGDDVIIGGDGADTIDGGDGYDTVDFADSNTGVNADLESRIGRGGHAQG 4729
Query: 244 D--------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
D L T+ ++GG + + + +++ G SGND + G ++V G
Sbjct: 4730 DVYTNVEALLGTQYADTLGGSTGDERLVGNDGDDTLDGRSGNDDLSGGKGDDVLTGGDGA 4789
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-------- 347
DV G G DT Y + + DA+ D L+ +E L +
Sbjct: 4790 DVIAGGDGNDTASYELSAEAVSVSLQNGTAAGSDAHG---DTLTSIENLTGSAFNDDLQG 4846
Query: 348 -DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + + +L A + LI G D
Sbjct: 4847 GDGTNILIGGRGDDVLRGMAGDDLLIGGRGADTLSGGA 4884
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 10/181 (5%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
I +Q Y G+ + + + GG D D + +DL
Sbjct: 4918 DGIEVIQGSY-HNDILRGD---GTDNMLRGGLGEDVLDGRGGFDTADYS-RSETPVTLDL 4972
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T + G + I+ IE V GSS +D + G++A + F GND G +G D
Sbjct: 4973 GTG-VGTAGEAAGDTLIS----IEKVTGSSYDDALSGSTAADTFDGGMGNDTMSGKAGSD 5027
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T+ + S + +A V DV +R D + + + +++
Sbjct: 5028 TYVFGTESGTDLVIENGDAADVDRIALTADLEPKDVSIIREGDDLLVEIEREGGLLIDTL 5087
Query: 366 A 366
Sbjct: 5088 R 5088
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 42/119 (35%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + +++ G G D++ G + +G DV G G+DTF +
Sbjct: 7197 LNGGSGNDLLFGGRGGDTINGDEGRDIIFGGRGRDTITGGAGADVLFGGRGVDTFVFGEG 7256
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S IY F+ + ++ + Q + + +L ++L
Sbjct: 7257 SGRDTIYDFKTTRSTNSSLIAGDQIAISIDGIDSFAQLLSYGSQSGGGVLFDFGGGDEL 7315
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 21/151 (13%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ------- 264
+ T+ D G + D + G I+LN ++W + ++
Sbjct: 1761 DGASDDLLITLLDKDGVETSDTIKVVGQLGGIELNLQAWEQVSPGLGVTYVSPALIERFI 1820
Query: 265 -------------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
V+E+ G+D + G +NV +GND G G DT+ +
Sbjct: 1821 FGDGTSLEFTEIADRVLENARTD-GDDAIYGMVNDNVLDGGAGNDYLTGFFGSDTYVFER 1879
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
I + A ++ +F ++
Sbjct: 1880 GYGHDVIEDNDTASKLFGNTPDTLEFRGGID 1910
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 55/174 (31%), Gaps = 13/174 (7%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++T+ V + + G+S + + G + +++ GND DG SG DT
Sbjct: 4618 GFATGYAATTYDLTLVGSDVTDLIEGTSDAETITGLAGDDLLVALGGNDTIDGGSGNDTI 4677
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A I + A + + + + FAD + I +
Sbjct: 4678 R--AGDGDDVIIGGDGADTIDGGD--------GYDTVDFADSNTGVNADLESRIGRGGHA 4727
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGR---DITFDSYLYLGSYDDLRNVFGSD 418
D+ + + + R + D+ DDL G D
Sbjct: 4728 QGDVYTNVEALLGTQYADTLGGSTGDERLVGNDGDDTLDGRSGNDDLSGGKGDD 4781
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T+I +G+ +D++IG + ++ GND G G DT+FY L I
Sbjct: 3530 FATLIGRNIGTGNDDLLIGTTGDDDLTGLGGNDSLLGGEGDDTYFYSRGDGLDSIEDASG 3589
Query: 324 AI 325
+
Sbjct: 3590 ST 3591
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+D + G +++V GND +G G DT+ + S IY +
Sbjct: 1980 TDGDDSIYGFRSDDVIEGGLGNDTLEGHGGNDTYLFSRGSGHDTIYEDTYDKGPLSTEKA 2039
Query: 334 KQDFLSDVERLRFADQCIDSVNVK 357
+D L + + +D ++
Sbjct: 2040 GEDTLV-FDGISASDVDFTRTDLD 2062
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 49/189 (25%), Gaps = 33/189 (17%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---------GVKNYIDLNTESWSSI 253
GN+ Y I D GG D L L + + + S S
Sbjct: 3303 GNDTYVWS----RGDGHDEISDIGGVDRLRLAGVTEGDLFFEQASRGLIVTIAATSAGSD 3358
Query: 254 GGYEKNMTIAQHTVIESV--------------------VGSSGNDVVIGNSANNVFFESS 293
GG + T IES+ S +D + G + +
Sbjct: 3359 GGTVILLGDPLGTAIESIELEDGTIIDSDAISARLIAQQASVFDDRITGFATGDTLAGGL 3418
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D G G DT+ Y I V D R+ F D
Sbjct: 3419 GDDTLLGGDGADTYTYARGDSSDIISDVSTDGAVDTLKLVGIDPSDVSLRIGFDDGRSTG 3478
Query: 354 VNVKQRSIL 362
I+
Sbjct: 3479 GGADLNVII 3487
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDAN 331
S ND ++G++ ++V G+DV G+ G DT+ Y A +I N ++ +
Sbjct: 3666 ASDSNDTILGSTGDDVLRGGVGDDVLQGNDGTDTYIYRAGDGDDRIIDIAPNRSSLHSSL 3725
Query: 332 EHKQDFLSDVERLRF 346
D +V+ + +
Sbjct: 3726 IELPD--HNVDDIAY 3738
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 24/65 (36%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G D + G + ++ G+D+ G G DT+ + +I + A
Sbjct: 3273 ATQGADTITGTAGDDEISGDGGSDLLFGGEGNDTYVWSRGDGHDEISDIGGVDRLRLAGV 3332
Query: 333 HKQDF 337
+ D
Sbjct: 3333 TEGDL 3337
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 31/140 (22%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR------------- 320
+ G+D+V G+ + SG+D G +G DT+ + +
Sbjct: 2628 TDGSDLVFGSVGADTLEGGSGDDDIRGGAGDDTYIFRRGDGRDVLTDDRREEVGGTDRLE 2687
Query: 321 -----------------FENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSIL 362
E ++ +D + +E + F D ++ ++
Sbjct: 2688 IRGYLAEEMQVSRVGGSNEEIVLTFDGTNDEIVLRGRIETVAFGDGTEFAIDDLISTAVG 2747
Query: 363 EYTASYEDLIQVIGQDVFES 382
+ TA +L +G DVFE
Sbjct: 2748 QGTAYANELTGTLGNDVFEG 2767
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 8/105 (7%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+SG+D + G + ++ F ++G+D G G D + + S IY
Sbjct: 3797 STSGDDKIYGFAGDDTFLSTTGDDTMWGRDGDDLYQFARGSGQDTIYD--------TVEA 3848
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
D + ++ + + + S D + V G
Sbjct: 3849 GGSDRVEFLDFVSSEVSVDRLYQGSDALVFTFATSPRDSLTVFGG 3893
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 7/142 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ + D I T+ D+G + + + + +S N +
Sbjct: 2053 DVDFTRTDLDLIITVRDTGESITIRDQYVRAEQQTHAVERFEFSDATLLFSNFN--PEDI 2110
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+VG++ ++ + G++ + V +GND G G D + + I +
Sbjct: 2111 --DLVGTAADETITGSNFSEVLDGRAGNDTLIGRDGGDIYRFDVGYGEDLIIDVQERSGW 2168
Query: 328 YDANEHKQDFLSDVERLRFADQ 349
D D +D + ++F D+
Sbjct: 2169 EDRR--GTDVPTD-DVVQFGDE 2187
Score = 44.7 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D +G+ + +V F GND G +G D + + + N + E D
Sbjct: 1686 DDAYVGSGSGDVLFGGKGNDALTGGAGGDYYIFTRGDGQDVVNDRGNFS--FGPVEAGID 1743
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
F+ V + +D + ++
Sbjct: 1744 FIQFVGDISSSDLKLVRDGASDDLLITLLDK 1774
Score = 44.7 bits (104), Expect = 0.050, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 24/163 (14%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGYEKNMTI 262
+ Y + + +G D + I ++ IG +TI
Sbjct: 2284 DTYAFGIGSDFDTIEERADAAGVIDRIVFGQSVNADGLILRRNDNDLLIDIGNGTDVLTI 2343
Query: 263 AQH---TVIESVVGSSG---------NDVVIGNSA----------NNVFFESSGNDVFDG 300
T +E + G +D++IG+ ++ +G+D +G
Sbjct: 2344 VDGLGATTVEHFEFADGSVLTLDQIRDDLLIGDETSQRIVGFDGRDDRIEGGAGSDSLEG 2403
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G DT+ + I + +D +S E
Sbjct: 2404 GLGDDTYTFGFGQGNAVIRETGGIDRIEFGTGVTRDQISFREV 2446
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 63/215 (29%), Gaps = 33/215 (15%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDS----GGDDLLD----------LTLIGGVKNYIDL 245
G G++ Y D GG D L+ ++ +GG I L
Sbjct: 2654 GGAGDDTYIFRRGDGRDVLTD---DRREEVGGTDRLEIRGYLAEEMQVSRVGGSNEEIVL 2710
Query: 246 NTESWSSIGGYEKNM-TIAQHTVIESVV----------GSSGNDVVIGNSANNVFFESSG 294
+ + + T+A E + G++ + + G N+VF G
Sbjct: 2711 TFDGTNDEIVLRGRIETVAFGDGTEFAIDDLISTAVGQGTAYANELTGTLGNDVFEGGRG 2770
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYR----FENAIIVYDANEHKQDFLSDVERLRFADQC 350
+DV G G D + + I IV + + + VE D
Sbjct: 2771 DDVLRGLDGSDIYIFRRGDGADIITDPRSATNGDKIVLADHFVSELKVRGVEG-SANDLL 2829
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ N Q ++ + I + H
Sbjct: 2830 MLLGNGDQIILVNGLNRFSRSIDRFEFNGGTVWTH 2864
Score = 40.9 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ ++G+D G G D F + Y R + + D + V+R
Sbjct: 3275 QGADTITGTAGDDEISGDGGSDLLFGGEGNDTYVWSRGDGHDEISD--------IGGVDR 3326
Query: 344 LRFADQCIDSVNVKQRS 360
LR A + +Q S
Sbjct: 3327 LRLAGVTEGDLFFEQAS 3343
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G++G+D + G+ +++ F GND + G D ++ +
Sbjct: 3278 DTITGTAGDDEISGDGGSDLLFGGEGNDTYVWSRGDGHDEISDIGGVDRLRLAGVTEGDL 3337
Query: 327 VYDANEHK 334
++
Sbjct: 3338 FFEQASRG 3345
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFF---YYAPSYLYKIYRFEN 323
+ + G +G+D + + ++ + G+D+ F SG DT + S + F +
Sbjct: 3802 DKIYGFAGDDTFLSTTGDDTMWGRDGDDLYQFARGSGQDTIYDTVEAGGSDRVEFLDFVS 3861
Query: 324 AIIVYDANEHKQDFLSD 340
+ + D D L
Sbjct: 3862 SEVSVDRLYQGSDALVF 3878
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 267 VIESVVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ G+ G++++ G + N F G+D+ G DT+ + S I +A
Sbjct: 2245 LLQIEAGNRGDNIITGLENQPNSFDGGQGDDLLIGGLAADTYAFGIGSDFDTIEERADAA 2304
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
V D Q +D LR D + +L
Sbjct: 2305 GVIDRIVFGQSVNADGLILRRNDNDLLIDIGNGTDVLT 2342
>gi|153949079|ref|YP_001399808.1| phage minor structural protein [Yersinia pseudotuberculosis IP 31758]
gi|152960574|gb|ABS48035.1| putative phage minor structural protein [Yersinia pseudotuberculosis
IP 31758]
Length = 3104
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2167 GFKQYQGGENADTFILTSATASKSHILSGGEGNDTVALGEVLGNEIDSIIDISKGYYSQV 2226
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2227 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2284
Query: 312 PSYL 315
Sbjct: 2285 GLAQ 2288
Score = 44.3 bits (103), Expect = 0.069, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2588 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2644
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2645 LPGNYIDTGDGNDAIIYIRGQEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2693
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2694 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2748
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2749 VEDSQITFDELFSLRPYSD 2767
>gi|84686516|ref|ZP_01014409.1| hypothetical protein 1099457000254_RB2654_07486 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665429|gb|EAQ11906.1| hypothetical protein RB2654_07486 [Rhodobacterales bacterium
HTCC2654]
Length = 2260
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 38/118 (32%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ I + + GS D++ GN ++ GND +G SG DT +
Sbjct: 58 DKSDASRGQVIVGRQGDDDLTGSDIRDIINGNRGDDRIEGGGGNDFMNGGSGTDTAVFSG 117
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
Y I ++ D L E L F D + ++ AS
Sbjct: 118 SILDYTISSNWWCNVITVRGPDGCDTLVGFEILEFDDYTFEIGGENPPLVVFDDASAP 175
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 9/118 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS---------IGGYEKNMTIAQHTVIESVVGSS 275
SG +LL + +DL+ + +G +++ A + + + GS
Sbjct: 2084 SGIAELLGRSNTFTTSVTVDLDPTTTGDEIVLTTIKTLGVKAESVNQAGTSEADLIFGSD 2143
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
D + G + +++ G+D+ G G D + + D
Sbjct: 2144 EGDTLGGAAGDDILMGFDGDDIIFGGVGNDIATGGLGADQFVFDAELGTETDVDTIRD 2201
Score = 44.7 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA----PSYLYK 317
I +++ G++G+D+++G +++ F GND+ G G D F + A + +
Sbjct: 2139 IFGSDEGDTLGGAAGDDILMGFDGDDIIFGGVGNDIATGGLGADQFVFDAELGTETDVDT 2198
Query: 318 IYRFENAI 325
I FE +
Sbjct: 2199 IRDFELGV 2206
>gi|229837642|ref|ZP_04457804.1| putative virulence determinant [Yersinia pestis Pestoides A]
gi|229704330|gb|EEO91341.1| putative virulence determinant [Yersinia pestis Pestoides A]
Length = 3083
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYL 315
Sbjct: 2291 GLAQ 2294
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2594 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2650
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2651 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2699
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2700 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2754
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2755 VEDSQITFDELFSLRPYSD 2773
>gi|224043576|ref|XP_002198031.1| PREDICTED: similar to Stromelysin-1 [Taeniopygia guttata]
Length = 505
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 63/197 (31%), Gaps = 49/197 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W+ + + Y+ T D+ AL WS+V L F + +DI
Sbjct: 135 WTKHVLTYRIVNYTPDLRPADVN-------TAIEKALHVWSRVTPLRFIKKDRGDADIMI 187
Query: 82 ISSNNGY-------------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ G+ + + +FD+ + W +GT L + A HE
Sbjct: 188 SFAARGHDDFIPFDGPGGSLAHAYAPGKDFGGDAHFDEDETWTKST-EGTNLFYVAAHEF 246
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H N YPVY + D
Sbjct: 247 GHSLGLSHSKDPNALMYPVYRKFDPSVLLLHQ--------------------------DD 280
Query: 188 IVAVQKIYGAPKGSLGN 204
I +Q +YG+ + +
Sbjct: 281 ITGIQYLYGSSPNTNND 297
>gi|254411878|ref|ZP_05025654.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196181600|gb|EDX76588.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 424
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 74/232 (31%), Gaps = 26/232 (11%)
Query: 197 APKGSLGNNIYKIEVQQ-----------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ + IY K T+ G D L GG +N +
Sbjct: 19 PAATNSNDVIYGRRGDDLVLAADGDDFIKGDQGNDTLVGGNGSDKL----YGGSENDLLF 74
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ I G + N T+ + + G S ND++ + +++ SG+D+ +G +G D
Sbjct: 75 GEDGDDFIRGDQGNDTLLGGFGNDKLFGGSENDLLFAHDGDDLLDGGSGDDILNGGAGND 134
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFL---SDVERLRFADQCIDSVNVK 357
+ N + N+ D L S + L+ D ++
Sbjct: 135 RLLGGIGQGNGTLTYDYNGTTLTGINDILNGESGDDTLLGGSGNDVLKGGDDDDTALASF 194
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+L + +DL GQD E E D+ F L S
Sbjct: 195 GDDLLLGESGDDDLQGGAGQDTLEGGAGADNLLGGEQDDLLFAG---LSSNP 243
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 57/186 (30%), Gaps = 11/186 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEK 258
G G++I + + + I G D LN ES + G
Sbjct: 120 GGSGDDI--LNGGAGNDRLLGGIGQGNGTLTYDYNGTTLTGINDILNGESGDDTLLGGSG 177
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + ++ + S G+D+++G S ++ +G D +G +G D L
Sbjct: 178 NDVLKGGDDDDTALASFGDDLLLGESGDDDLQGGAGQDTLEGGAGADNLLGGEQDDLLFA 237
Query: 319 YRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
N D D LS +RL V IL + L
Sbjct: 238 GLSSNPFSTTD-----NDTLSGGNGDDRLIGDAGNDILVGGIGDDILTGLIGNDVLNGTG 292
Query: 376 GQDVFE 381
G E
Sbjct: 293 GTGAGE 298
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T +++ G +G+D +IG++ N++ G+D+ G G D + ++
Sbjct: 247 TDNDTLSGGNGDDRLIGDAGNDILVGGIGDDILTGLIGNDVLNGTGGTGAGEVDSLRGDA 306
Query: 326 IVYDANEHKQDF--LSDVERLRFA 347
I + QD L D + + +A
Sbjct: 307 IGLPSQFFGQDTFVLGDADNVFYA 330
Score = 44.3 bits (103), Expect = 0.064, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 36/135 (26%), Gaps = 17/135 (12%)
Query: 270 SVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGSSGLDTFFYYA------PSY 314
+ ++ NDV+ G ++ GND G +G D + +
Sbjct: 18 NPAATNSNDVIYGRRGDDLVLAADGDDFIKGDQGNDTLVGGNGSDKLYGGSENDLLFGED 77
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER-LRFA-DQCIDSVNVKQRSILEYTASYEDLI 372
R + E L FA D IL A + L+
Sbjct: 78 GDDFIRGDQGNDTLLGGFGNDKLFGGSENDLLFAHDGDDLLDGGSGDDILNGGAGNDRLL 137
Query: 373 QVIGQDVFESMKHFY 387
IGQ +
Sbjct: 138 GGIGQGNGTLTYDYN 152
>gi|165924836|ref|ZP_02220668.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937307|ref|ZP_02225871.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010385|ref|ZP_02231283.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|167399774|ref|ZP_02305292.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421932|ref|ZP_02313685.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|165914781|gb|EDR33394.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923036|gb|EDR40187.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990871|gb|EDR43172.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166960069|gb|EDR56090.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050482|gb|EDR61890.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|262360925|gb|ACY57646.1| virulence determinant [Yersinia pestis D106004]
Length = 3104
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2167 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2226
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2227 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2284
Query: 312 PSYL 315
Sbjct: 2285 GLAQ 2288
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2588 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2644
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2645 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2693
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2694 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2748
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2749 VEDSQITFDELFSLRPYSD 2767
>gi|145597875|ref|YP_001161951.1| virulence determinant [Yersinia pestis Pestoides F]
gi|145209571|gb|ABP38978.1| virulence determinant [Yersinia pestis Pestoides F]
Length = 3110
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYL 315
Sbjct: 2291 GLAQ 2294
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2594 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2650
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2651 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2699
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2700 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2754
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2755 VEDSQITFDELFSLRPYSD 2773
>gi|320013971|gb|ADV97542.1| putative virulence determinant [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 3110
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYL 315
Sbjct: 2291 GLAQ 2294
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2594 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2650
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2651 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2699
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2700 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2754
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2755 VEDSQITFDELFSLRPYSD 2773
>gi|255263347|ref|ZP_05342689.1| rhizobiocin RzcA [Thalassiobium sp. R2A62]
gi|255105682|gb|EET48356.1| rhizobiocin RzcA [Thalassiobium sp. R2A62]
Length = 276
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 5/157 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI G D++ GG N I G N TI T +
Sbjct: 78 NDILNGGAGNDTIEGGDGADIIS----GGADNDFIFGGGGQDDIDGGSGNDTIGGGTGAD 133
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G G+DV+ G + +GND G G DT + + ++ + N + D
Sbjct: 134 VIRGKRGDDVIDGGDQGDNISGGTGNDTIIGGKGNDTLYGNNGNDVFVFTQGGNVDTIKD 193
Query: 330 ANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYT 365
++D + +D +I+ +
Sbjct: 194 FELGVDKLDVTDFGTISISDALAALELAGSDTIINFG 230
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 9/138 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---------SG 303
+ G E N ++ + + G +GND + G ++ + ND G SG
Sbjct: 63 MNGGEGNDSLQGDIGNDILNGGAGNDTIEGGDGADIISGGADNDFIFGGGGQDDIDGGSG 122
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + + R ++ I D ++ + + N +
Sbjct: 123 NDTIGGGTGADVIRGKRGDDVIDGGDQGDNISGGTGNDTIIGGKGNDTLYGNNGNDVFVF 182
Query: 364 YTASYEDLIQVIGQDVFE 381
D I+ V +
Sbjct: 183 TQGGNVDTIKDFELGVDK 200
>gi|162418635|ref|YP_001604775.1| putative phage minor structural protein [Yersinia pestis Angola]
gi|162351450|gb|ABX85398.1| putative phage minor structural protein [Yersinia pestis Angola]
Length = 3104
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2167 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2226
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2227 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2284
Query: 312 PSYL 315
Sbjct: 2285 GLAQ 2288
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2588 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2644
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2645 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2693
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2694 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2748
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2749 VEDSQITFDELFSLRPYSD 2767
>gi|161520258|ref|YP_001583685.1| hemolysin-type calcium-binding region [Burkholderia multivorans ATCC
17616]
gi|189353565|ref|YP_001949192.1| cable pili-associated 22 kDa adhesin protein [Burkholderia
multivorans ATCC 17616]
gi|160344308|gb|ABX17393.1| Hemolysin-type calcium-binding region [Burkholderia multivorans ATCC
17616]
gi|189337587|dbj|BAG46656.1| cable pili-associated 22 kDa adhesin protein [Burkholderia
multivorans ATCC 17616]
Length = 2704
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 10/152 (6%)
Query: 228 DDLLDLTLIGGVKNYIDLN----TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D L+ ++ N ++S S I G + T+ + + + G +G+DV+ G
Sbjct: 2483 TDKTGLSASATAGQLLNANLLGSSQSTSIIEGTQNGDTVNGTSGNDRLYGYNGDDVLNGG 2542
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENAIIVYDANEHKQDF 337
N++ +GND +G +G D A ++ +E + + D
Sbjct: 2543 DGNDLLRGGAGNDTLNGGNGNDILIGGAGDDTLTGGAGTDVFLWEVVTPADNTGGNGHDV 2602
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++D + + ++ YTA +
Sbjct: 2603 ITDFQLATGPTDTGGDKIDLSKLLVGYTADAD 2634
>gi|22127209|ref|NP_670632.1| hypothetical protein y3333 [Yersinia pestis KIM 10]
gi|108806315|ref|YP_650231.1| putative virulence determinant [Yersinia pestis Antiqua]
gi|108813304|ref|YP_649071.1| virulence determinant [Yersinia pestis Nepal516]
gi|149367044|ref|ZP_01889077.1| putative virulence determinant [Yersinia pestis CA88-4125]
gi|166212770|ref|ZP_02238805.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|218928119|ref|YP_002345994.1| putative virulence determinant [Yersinia pestis CO92]
gi|229840866|ref|ZP_04461025.1| putative virulence determinant [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842573|ref|ZP_04462728.1| putative virulence determinant [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903767|ref|ZP_04518880.1| putative virulence determinant [Yersinia pestis Nepal516]
gi|294502890|ref|YP_003566952.1| putative virulence determinant [Yersinia pestis Z176003]
gi|21960276|gb|AAM86883.1|AE013934_6 hypothetical [Yersinia pestis KIM 10]
gi|108776952|gb|ABG19471.1| virulence determinant [Yersinia pestis Nepal516]
gi|108778228|gb|ABG12286.1| putative virulence determinant [Yersinia pestis Antiqua]
gi|115346730|emb|CAL19613.1| putative virulence determinant [Yersinia pestis CO92]
gi|149290658|gb|EDM40734.1| putative virulence determinant [Yersinia pestis CA88-4125]
gi|166206062|gb|EDR50542.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|229679537|gb|EEO75640.1| putative virulence determinant [Yersinia pestis Nepal516]
gi|229690883|gb|EEO82937.1| putative virulence determinant [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697232|gb|EEO87279.1| putative virulence determinant [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|262364866|gb|ACY61423.1| putative virulence determinant [Yersinia pestis D182038]
gi|294353349|gb|ADE63690.1| putative virulence determinant [Yersinia pestis Z176003]
Length = 3110
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYL 315
Sbjct: 2291 GLAQ 2294
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2594 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2650
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2651 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2699
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2700 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2754
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2755 VEDSQITFDELFSLRPYSD 2773
>gi|260784612|ref|XP_002587359.1| hypothetical protein BRAFLDRAFT_231413 [Branchiostoma floridae]
gi|229272504|gb|EEN43370.1| hypothetical protein BRAFLDRAFT_231413 [Branchiostoma floridae]
Length = 181
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 64/205 (31%), Gaps = 56/205 (27%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
D W + Y+ T ++ A W V L F T H DI
Sbjct: 11 DVRWHKTDLSYRISYYTADLTREEV-------DTAIADAFSVWESVSSLRFIRTFGHPDI 63
Query: 80 --------KFIS-------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
F N + P +S +++FD A+ W +G
Sbjct: 64 DLSFVYGEHFGDAEPFDGPSSGTGGGNLAHAFPPDIESELRGDVHFDDAEKWTMDKTEGI 123
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASF 177
L A+HEIGH+LGL H +N SVM Y++
Sbjct: 124 NLFQLAVHEIGHSLGLSHSRQHN-------------------SVMYPYYLGLRRHFRLHR 164
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSL 202
DI +Q++YG P+
Sbjct: 165 --------DDIRDIQQLYGPPRTDT 181
>gi|119488095|ref|ZP_01621539.1| glycerophosphoryl diester phosphodiesterase [Lyngbya sp. PCC 8106]
gi|119455384|gb|EAW36523.1| glycerophosphoryl diester phosphodiesterase [Lyngbya sp. PCC 8106]
Length = 1121
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 9/125 (7%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ T+ GDDL+D G + + + S S+ G N I + + G +GND
Sbjct: 947 MDTVAGGLGDDLIDG---GEGDDVLRGDANSRSTGGTVGGNDEIYGGPGNDRLGGKAGND 1003
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G ++ F GND+ DG G DT A D +
Sbjct: 1004 FLFGEVGDDEIFGDDGNDLLDGGLGHDTLTGD------DFSGGTGRDTFVLAVGEGTDLI 1057
Query: 339 SDVER 343
D E
Sbjct: 1058 VDFEV 1062
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 2/129 (1%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG ++++ G++ + G+D+ DG G D A S N I
Sbjct: 933 VGGDASEILTGSAEMDTVAGGLGDDLIDGGEGDDVLRGDANSRSTGGTVGGNDEIYGGPG 992
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + + L + +L+ ++ L G
Sbjct: 993 NDRLGGKAGNDFLFGEVGDDEIFGDDGNDLLDGGLGHDTLTGDDFSGGTGRDTFVLAVG- 1051
Query: 392 SEGRDITFD 400
EG D+ D
Sbjct: 1052 -EGTDLIVD 1059
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 42/149 (28%), Gaps = 14/149 (9%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT---IAQHTVIESVVGSSGNDVVIGN 283
G + G + + E+ S G + + +++V G G+D++ G
Sbjct: 903 GTVYYEGQYARGGQLILSFPAETISGSGEFVGGDASEILTGSAEMDTVAGGLGDDLIDGG 962
Query: 284 SANNVFFESS----------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
++V + GND G G D + + I D
Sbjct: 963 EGDDVLRGDANSRSTGGTVGGNDEIYGGPGNDRL-GGKAGNDFLFGEVGDDEIFGDDGND 1021
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D + L D + +
Sbjct: 1022 LLDGGLGHDTLTGDDFSGGTGRDTFVLAV 1050
>gi|34978374|sp|Q57506|CYAA_BORBR RecName: Full=Bifunctional hemolysin/adenylate cyclase; AltName:
Full=AC-HLY; AltName: Full=ACT; AltName: Full=Cyclolysin;
Contains: RecName: Full=Calmodulin-sensitive adenylate
cyclase; AltName: Full=ATP pyrophosphate-lyase; AltName:
Full=Adenylyl cyclase; Contains: RecName: Full=Hemolysin;
Flags: Precursor
Length = 1706
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G+D +D + G L+ +
Sbjct: 1454 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRG-----LDAGAKGV 1500
Query: 250 WSSIGGYEKNMTIAQHT-----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS +DV+IG++ NV +GNDV G +G
Sbjct: 1501 FLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGD 1560
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + +N
Sbjct: 1561 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAG 1616
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1617 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1646
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 1010 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 1069
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 1070 DLGVWSNQLDGGAGVDTVKY 1089
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 8/131 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S G D D V++ ++ S IG + N + Q
Sbjct: 1227 YGFGIEADLSEGWVRKAARRGMDYYD-----SVRSVENVIGTSMKDVLIGDAQANTLMGQ 1281
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 1282 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREH 1340
Query: 325 IIVYDANEHKQ 335
++
Sbjct: 1341 DVLRGGAGVDT 1351
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 15/194 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 1063 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 1122
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 1123 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLG--LD 1179
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D K + EY E DL +
Sbjct: 1180 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGW 1239
Query: 376 GQDVFESMKHFYEF 389
+ +Y+
Sbjct: 1240 VRKAARRGMDYYDS 1253
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1135 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1194
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD V R ++Y S
Sbjct: 1195 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 1254
Query: 369 EDLIQVIGQDVFESM 383
+ VIG + + +
Sbjct: 1255 RSVENVIGTSMKDVL 1269
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 1304 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 1357
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 1358 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 1415
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 1416 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 1474
Query: 328 YDANEHKQDF 337
D +
Sbjct: 1475 LDGGDGNDTV 1484
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 1021 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 1080
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 1081 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 1140
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 1141 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 1172
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 1015 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 1074
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 1075 SNQLDGGAGVDTV 1087
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 58/207 (28%), Gaps = 33/207 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D + + + DL+
Sbjct: 1179 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEG 1238
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D T
Sbjct: 1239 -WVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVR 1288
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
L F + D L D ++ +
Sbjct: 1289 GGDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREH 1340
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ L G D + + G++ GR
Sbjct: 1341 DVLRGGAGVDTVDYSQAGAHAGVATGR 1367
>gi|289676889|ref|ZP_06497779.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. syringae FF5]
Length = 560
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 327 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G S +++ +G D G +G DTF + +
Sbjct: 387 TEGNDVINGGAAHEQIFGLAGKDTLNGGSGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 37.4 bits (85), Expect = 7.7, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 39/137 (28%), Gaps = 35/137 (25%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G + ++ + T +T ++ IDL ++ +G +
Sbjct: 430 TGGAGADTFRFDQLTDSYRTATT------SSTDLVTDFDISQDRIDLTNLGFTGLGSGKG 483
Query: 259 NM------------------TIAQHTVIESVVGSSGNDVV-----------IGNSANNVF 289
A E + + D + G + +
Sbjct: 484 GTLNISYNATLDRTYVKSLDADASGNRFELGLSGNLKDTLNASHFIFQHVVEGTAGGDTL 543
Query: 290 FESSGNDVFDGSSGLDT 306
+ GNDV +G++G D
Sbjct: 544 TGTDGNDVLNGNAGTDR 560
>gi|46241610|gb|AAS82995.1| putative calcium-binding protein-like protein [Azospirillum
brasilense]
Length = 953
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 6/132 (4%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ +++ G +GND++IGN N+ G+D DG +G D F +
Sbjct: 169 DGNDTLTSDDAADNINGGAGNDILIGNGGNDTLIGGVGHDTMDGGAGADVFDGGDGFDVV 228
Query: 317 KIYRFENAIIVYDAN------EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +++ N + D + +ER ++ V A +
Sbjct: 229 TYENATSGMVIDIGNPANSTGDAAGDSFTGIERWIGSNYADTMVAGNDPVWFWGHAGDDV 288
Query: 371 LIQVIGQDVFES 382
I G D ES
Sbjct: 289 EIGGAGNDTMES 300
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 6/158 (3%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G DD + GG I + + N TI + G + +D++ G +
Sbjct: 460 GNDDGVWFWGHGGNDVEI---GGAGNDTMESGIGNDTIYGGGGDDRAFGRADDDMLYGEA 516
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N++ GND+ DG +G DT + + + Y ++
Sbjct: 517 GNDLLAGGGGNDMLDGGTGNDTLIGDWGVD--TMIGGDGDDVFYSGAHDPLPEADIIQGG 574
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D I + ++ D +++ +V +
Sbjct: 575 AGNDTFIIAAQSDAGTVSYDGGEGTDTLRISSDNVADP 612
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 44/149 (29%), Gaps = 31/149 (20%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+Y GDD + N + + G N I +
Sbjct: 295 NDTMESGDGNDTVYGGDGDDQI----YSRADNDV---------LYGEAGNDLIYGGWGND 341
Query: 270 SVVGSSGNDVVIGNS------------------ANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G +GND + G N++ +GND G G DT A
Sbjct: 342 MLDGGAGNDTLFGEGDADTINGGDGDDSLDGGQGNDLMNGGAGNDTLIGGLGHDTMEGGA 401
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ ++ + + +A L +
Sbjct: 402 GADVFDGGDGFDEVTYANATAGVVLDLRN 430
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 67/241 (27%), Gaps = 36/241 (14%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN+I T+ G D+ D V Y + + IG
Sbjct: 184 NGGAGNDILIGNGGNDTLIGGVGHDTMDGGAGADVFDGGDGFDVVTYENATSGMVIDIGN 243
Query: 256 YEKNMTIAQH---TVIESVVGSSGNDV---------VIGNSANNVFFESSGNDVFDGSSG 303
+ A T IE +GS+ D G++ ++V +GND + G
Sbjct: 244 PANSTGDAAGDSFTGIERWIGSNYADTMVAGNDPVWFWGHAGDDVEIGGAGNDTMESGDG 303
Query: 304 LDTFFYYAPSYLYKI--------------YRFENAIIVYDANEHKQDFL---SDVERLRF 346
DT + + D L D + +
Sbjct: 304 NDTVYGGDGDDQIYSRADNDVLYGEAGNDLIYGGWGNDMLDGGAGNDTLFGEGDADTING 363
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
D + ++ A + LI +G D E F +G FD Y
Sbjct: 364 GDGDDSLDGGQGNDLMNGGAGNDTLIGGLGHDTMEGGAGADVFDGGDG----FDEVTYAN 419
Query: 407 S 407
+
Sbjct: 420 A 420
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 59/181 (32%), Gaps = 28/181 (15%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ TIY GGDD D L G N + + G N T+
Sbjct: 482 NDTMESGIGNDTIYGGGGDDRAFGRADDDMLYGEAGNDLLAGGGGNDMLDGGTGNDTLIG 541
Query: 265 HTVIESVVGSSGNDVVIGNSAN-----NVFFESSGNDVF-------------DGSSGLDT 306
+++++G G+DV + + ++ +GND F DG G DT
Sbjct: 542 DWGVDTMIGGDGDDVFYSGAHDPLPEADIIQGGAGNDTFIIAAQSDAGTVSYDGGEGTDT 601
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + + EN I L+ VERL +V + +
Sbjct: 602 LRISSDN----VADPENKITTATPQIDISGMALTSVERLELVGSVRHTVTMTAAQANGFA 657
Query: 366 A 366
+
Sbjct: 658 S 658
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 40/132 (30%), Gaps = 11/132 (8%)
Query: 263 AQHTVIESVVGSS---GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL---- 315
A+ E V + GND + + A + +GND+ G+ G DT
Sbjct: 154 ARGWAHELAVTGTPTDGNDTLTSDDAADNINGGAGNDILIGNGGNDTLIGGVGHDTMDGG 213
Query: 316 --YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ + V + D+ A+ D+ I + S
Sbjct: 214 AGADVFDGGDGFDVVTYENATSGMVIDIGNP--ANSTGDAAGDSFTGIERWIGSNYADTM 271
Query: 374 VIGQDVFESMKH 385
V G D H
Sbjct: 272 VAGNDPVWFWGH 283
>gi|291571947|dbj|BAI94219.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 922
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 12/154 (7%)
Query: 196 GAPKGSLGNN-----IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+ + G++ + T+ G+D L ++ N++D +
Sbjct: 668 GSDTVTDGSDSIIIGTDDNDRLVGTGKGNDTLLGGLGNDTL---IVRRGNNFLDGGPGND 724
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+GG + I + ++G GND + G N+ GND +G G D
Sbjct: 725 RLVGGVGHDTLIG-GAGRDILIGGKGNDFLDGGPGNDRLNGGPGNDTLNGGPGRDILTGG 783
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ ++ F A + DF +++
Sbjct: 784 PGAD---VFVFGFGESRVAAPDRITDFEIGTDKI 814
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 64/210 (30%), Gaps = 27/210 (12%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I + GDD L T I + S + + N T+ ++++G G+D
Sbjct: 398 NIITGTDGDDTLFGTNNNDS---ILGLGGNDSLVSTGKGNDTLLGGLGNDTLIGGLGDDF 454
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYY--------APSYLYKIYRFENAIIVYDAN 331
+ G N+ +GN+ G G DT + I ++N +++ D+
Sbjct: 455 LSGGPGNDSLVAGAGNNRLFGDGGNDTLVGNSLGENTLRGGAGNDSIVGYQNDLVLGDSG 514
Query: 332 EH---------------KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ D LS + F + ++ Y
Sbjct: 515 NNVLIARSSNVTLEGGSGNDTLS-ISAYSFTGNVFRGGDGDDSYMIRYGGMGRLQAGSRI 573
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+D LS G I + +L
Sbjct: 574 EDSGGQDTLTIVNNLSPGTPIDLNLDGFLS 603
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I + GDD L T + N S + N T+ +++VG G+D
Sbjct: 120 NIITGTDGDDTLFGTNNNDSILGLGGNDRLVS---TGKGNDTLLGGLGNDTLVGGLGDDF 176
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYY--------APSYLYKIYRFENAIIVYDAN 331
+ G N+ +GN+ G G DT + I ++N +++ D+
Sbjct: 177 LRGGPGNDSLVAGAGNNRLFGDGGNDTLVGNSLGENTLRGGAGNDSIVGYQNDLVLGDSG 236
Query: 332 EH 333
+
Sbjct: 237 NN 238
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 57/174 (32%), Gaps = 39/174 (22%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSS 252
G+ G++ DS I GG+D L + TL+GG+ N +
Sbjct: 401 TGTDGDDTL-FGTNNNDS-----ILGLGGNDSLVSTGKGNDTLLGGLGNDTLIGGLGDDF 454
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS-ANNVFFESSGND--------------- 296
+ G N ++ + G GND ++GNS N +GND
Sbjct: 455 LSGGPGNDSLVAGAGNNRLFGDGGNDTLVGNSLGENTLRGGAGNDSIVGYQNDLVLGDSG 514
Query: 297 -----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+G SG DT A S+ ++R + Y L
Sbjct: 515 NNVLIARSSNVTLEGGSGNDTLSISAYSFTGNVFRGGDGDDSYMIRYGGMGRLQ 568
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 9/142 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---IDLNTESWSS--IGGYEKN 259
+ + + FI+T+ D G +++ + G ++ T + + G N
Sbjct: 356 DFFNAAGTGAGTGFIETVNDLRGQQIINQVPVLGSDTVTDGPNIITGTDGDDTLFGTNNN 415
Query: 260 MTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+I +S+V GND ++G N+ G+D G G D+ A +
Sbjct: 416 DSILGLGGNDSLVSTGKGNDTLLGGLGNDTLIGGLGDDFLSGGPGNDSLVAGAGNNRL-F 474
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
N +V N ++ L
Sbjct: 475 GDGGNDTLV--GNSLGENTLRG 494
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 9/142 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---IDLNTESWSS--IGGYEKN 259
+ + + FI+T+ D G +++ + G ++ T + + G N
Sbjct: 78 DFFNAAGTGAGTGFIETVNDLRGQQIINQVPVLGSDTVTDGPNIITGTDGDDTLFGTNNN 137
Query: 260 MTIAQ-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+I V GND ++G N+ G+D G G D+ A +
Sbjct: 138 DSILGLGGNDRLVSTGKGNDTLLGGLGNDTLVGGLGDDFLRGGPGNDSLVAGAGNNRL-F 196
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
N +V N ++ L
Sbjct: 197 GDGGNDTLV--GNSLGENTLRG 216
Score = 44.0 bits (102), Expect = 0.083, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 44/150 (29%), Gaps = 7/150 (4%)
Query: 229 DLLDLTLIGGVKNYI----DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
D + G +I DL + + + T+ I + G+ G+D + G +
Sbjct: 356 DFFNAAGTGAGTGFIETVNDLRGQQIINQVPVLGSDTVTDGPNI--ITGTDGDDTLFGTN 413
Query: 285 ANNVFFESSGNDVF-DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N+ GND G DT + ++ + N+ +
Sbjct: 414 NNDSILGLGGNDSLVSTGKGNDTLLGGLGNDTLIGGLGDDFLSGGPGNDSLVAGAGNNRL 473
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
N + L A + ++
Sbjct: 474 FGDGGNDTLVGNSLGENTLRGGAGNDSIVG 503
>gi|51597529|ref|YP_071720.1| pore forming RTX toxin family protein [Yersinia pseudotuberculosis IP
32953]
gi|51590811|emb|CAH22457.1| pore forming RTX toxin family protein [Yersinia pseudotuberculosis IP
32953]
Length = 3103
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2166 GFKQYQGGENADTFILTSAAASKSHILSGGEGNDTVALGEVLGNEIDSIIDISKGYYSQV 2225
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2226 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2283
Query: 312 PSYL 315
Sbjct: 2284 GLAQ 2287
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 68/199 (34%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ NSA
Sbjct: 2587 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVINSATF 2643
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2644 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2692
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + +F
Sbjct: 2693 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VDFIW 2747
Query: 392 SEGRDITFDSYLYLGSYDD 410
EG ITFD L Y D
Sbjct: 2748 VEGSQITFDELFSLCPYSD 2766
>gi|296219419|ref|XP_002755837.1| PREDICTED: matrix metalloproteinase-25 [Callithrix jacchus]
Length = 685
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 67/210 (31%), Gaps = 50/210 (23%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETS 74
+ L W + ++ ++L P + + +AL W DL F E
Sbjct: 115 YALSGSVWKKRTLTWRVRSFPQS------SQLRPETVRVLMNYALMAWGMETDLKFHEVD 168
Query: 75 IHS----DI------KFISSNNGYVCTPRYDSRYF--------MEINFDKADVWRYGI-- 114
DI F + + + F + +FD + W +G
Sbjct: 169 SPQGQEPDILVDFASAFHQDSYPFDGVGGTLAHAFFPGEHPISGDTHFDDEETWTFGSKD 228
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G+GT L A+HE GHALGL H + N S+M F
Sbjct: 229 GEGTDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQGPVGDP 269
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D +Q++YG + +
Sbjct: 270 DKYRLSQ----DDRDGLQQLYGKAPQTPYD 295
>gi|262274865|ref|ZP_06052676.1| surface adhesion protein putative [Grimontia hollisae CIP 101886]
gi|262221428|gb|EEY72742.1| surface adhesion protein putative [Grimontia hollisae CIP 101886]
Length = 2407
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIG-GYEKNMTI---------AQHTVIESVVGSSGNDV 279
L + ++ + ++W+ + G + N TI + T + + G SG+D
Sbjct: 2186 TLSSSSAELEDGTLNASYQAWADVAQGGKGNDTIFGEDGTDIISGGTGEDRLFGGSGSDA 2245
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G S +++ +GND G +G DT A ++ ++ +++ + +DF +
Sbjct: 2246 LRGGSGDDILDGGTGNDWLRGDAGNDTLIGGAGEDVF-VWGSADSVAGELWVDTAKDFNT 2304
Query: 340 DVERLRFAD 348
++L D
Sbjct: 2305 SEDKLHLTD 2313
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 8/139 (5%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLT----LIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y + IY D + L + +L T S SS + +
Sbjct: 2141 TYGGNDHVEGGAGDDWIYLGDSGDNAGYSEEEMLGFVAASESELFTLSSSSAELEDGTLN 2200
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + G GND + G ++ +G D G SG D + +
Sbjct: 2201 ASYQAWADVAQGGKGNDTIFGEDGTDIISGGTGEDRLFGGSGSDALRGGSGDDILDGGTG 2260
Query: 322 ENAIIVYDANEHKQDFLSD 340
+ + + D L
Sbjct: 2261 NDWL----RGDAGNDTLIG 2275
>gi|119489485|ref|ZP_01622246.1| hypothetical protein L8106_27926 [Lyngbya sp. PCC 8106]
gi|119454564|gb|EAW35711.1| hypothetical protein L8106_27926 [Lyngbya sp. PCC 8106]
Length = 1532
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 62/171 (36%), Gaps = 26/171 (15%)
Query: 194 IYGAPKGS-----LGNNI---YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVK 240
IYG GN+ K IY + G+D L + +L G
Sbjct: 1290 IYGGENNDQIKGENGNDTLFGDKDNDAITGGNGDDVIYGNTGNDTLEGAQGNDSLYSGQD 1349
Query: 241 NYI-------DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
N + DL + G E N T+ + ++++ G+ G+D++ G N++
Sbjct: 1350 NDLAKGGVGNDLVFGDIGDDIVEGNEGNDTLHGNQGVDTISGNDGDDLIYGGQGNDLLDG 1409
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++G+D G +G DT ++ ++ D L+ E
Sbjct: 1410 NNGSDTLFGDNGDDTLDGGFGDDSLIGGNGDDWLV----GAEGNDTLTGGE 1456
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 60/184 (32%), Gaps = 38/184 (20%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+NIY + I+ + G+D ++ G + I
Sbjct: 1260 DDNIYGTSASLE-------IFGNKGNDYIE----------------------GQANSEAI 1290
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSY 314
+ + G +GND + G+ N+ +G+DV G++G DT Y
Sbjct: 1291 YGGENNDQIKGENGNDTLFGDKDNDAITGGNGDDVIYGNTGNDTLEGAQGNDSLYSGQDN 1350
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N ++ D + + + L +Q +D+++ L Y DL+
Sbjct: 1351 DLAKGGVGNDLVFGDIGDDIVEGNEGNDTL-HGNQGVDTISGNDGDDLIYGGQGNDLLDG 1409
Query: 375 IGQD 378
Sbjct: 1410 NNGS 1413
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 1/128 (0%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G +G++I + Q + G+D DL G + +D N S ++ G +
Sbjct: 1364 GDIGDDIVEGNEGNDTLHGNQGVDTISGNDGDDLIYGGQGNDLLDGNNGSD-TLFGDNGD 1422
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ +S++G +G+D ++G N+ G D F SS D F + +
Sbjct: 1423 DTLDGGFGDDSLIGGNGDDWLVGAEGNDTLTGGEGRDRFYISSSFDDNFITDFADGFDKI 1482
Query: 320 RFENAIIV 327
+
Sbjct: 1483 ALTGGLTF 1490
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + I + + G+ GND + G + + + ND G +G DT F
Sbjct: 1254 VFGLEGDDNIYGTSASLEIFGNKGNDYIEGQANSEAIYGGENNDQIKGENGNDTLFGD-- 1311
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED 370
I ++Y D L + ++ Q D + L + +D
Sbjct: 1312 KDNDAITGGNGDDVIY--GNTGNDTLEGAQGNDSLYSGQDNDLAKGGVGNDLVFGDIGDD 1369
Query: 371 LIQVIGQD 378
+++ +
Sbjct: 1370 IVEGNEGN 1377
Score = 41.3 bits (95), Expect = 0.56, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ V G G+D + G SA+ F + GND +G + + + + I ++
Sbjct: 1252 QKVFGLEGDDNIYGTSASLEIFGNKGNDYIEGQANSEAIYGGENNDQ--IKGENGNDTLF 1309
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ + + + + + D++ Q + Y+ DL +
Sbjct: 1310 GDKDNDAITGGNGDDVIYGNTGNDTLEGAQGNDSLYSGQDNDLAK 1354
>gi|307947325|ref|ZP_07662659.1| outer membrane adhesin like protein [Roseibium sp. TrichSKD4]
gi|307769467|gb|EFO28694.1| outer membrane adhesin like protein [Roseibium sp. TrichSKD4]
Length = 1456
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 50/145 (34%), Gaps = 14/145 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
IY +GG+D++ G + G N I + + + G+ G D +
Sbjct: 1302 IYGAGGNDIIVGGFYGDQ-------------LAGGTGNDRIWGNWGNDELHGNDGRDRLF 1348
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G N+ +GND G G D F Y A KI FE DV
Sbjct: 1349 GGFGNDTLSGGAGNDRLWGGWGRDNFVYEAGDGRDKIMDFETGHHWGWFRSRGDTISIDV 1408
Query: 342 ERL-RFADQCIDSVNVKQRSILEYT 365
+ + F D + + + ++
Sbjct: 1409 DGIDSFTDLMGTASQDGRNVVFDFG 1433
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 48/153 (31%), Gaps = 20/153 (13%)
Query: 250 WSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
WSS I G N I + + G +GND + GN N+ + G D G G DT
Sbjct: 1297 WSSNQIYGAGGNDIIVGGFYGDQLAGGTGNDRIWGNWGNDELHGNDGRDRLFGGFGNDTL 1356
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + +++ +D + D E +
Sbjct: 1357 SGGAGND--RLWGGWGRDNFVYEAGDGRDKIMDFETGHHWGWFRSRGDTIS--------- 1405
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
I D +S +GR++ FD
Sbjct: 1406 -------IDVDGIDSFTDLMGTASQDGRNVVFD 1431
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 63/176 (35%), Gaps = 13/176 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+N+Y+ + +Y + DD + ++ N +D ++ S G + +++
Sbjct: 207 DNLYEGGITSTLFEGKTVVYGTEFDDRMYYSITTEGNNVLD---KTASVAGIWSFDLSHH 263
Query: 264 QHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ VG G+D ++G ++ F ND G G D +
Sbjct: 264 KDATNGLALVGGHGDDRIVGFKYDDYLFGGGDNDTLYGRDGEDVLDGGKGQDELTGGQGN 323
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ D + D L + D+ D ++ + + Y + +I D
Sbjct: 324 DRLLGGDNS----DVLRGDD-----DEVADLLDGGEGADKIYAGLNDIVIGGDAND 370
>gi|221200500|ref|ZP_03573542.1| cable pili-associated 22 kDa adhesin protein [Burkholderia
multivorans CGD2M]
gi|221206180|ref|ZP_03579194.1| thrombospondin type 3 repeat family [Burkholderia multivorans CGD2]
gi|221174192|gb|EEE06625.1| thrombospondin type 3 repeat family [Burkholderia multivorans CGD2]
gi|221179841|gb|EEE12246.1| cable pili-associated 22 kDa adhesin protein [Burkholderia
multivorans CGD2M]
Length = 2704
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 10/152 (6%)
Query: 228 DDLLDLTLIGGVKNYIDLN----TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D L+ ++ N ++S S + G + T+ + + + G +G+DV+ G
Sbjct: 2483 TDKTGLSASATAGQLLNANLLGSSQSTSIVEGTQNGDTVNGTSGNDRLYGYNGDDVLNGG 2542
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENAIIVYDANEHKQDF 337
N++ +GND +G +G D A ++ +E + + D
Sbjct: 2543 DGNDLLRGGAGNDTLNGGNGNDILIGGAGDDTLTGGAGTDVFLWEVVTPADNTGGNGHDA 2602
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++D + + ++ YTA +
Sbjct: 2603 ITDFQLASGPSDTGGDKIDLSKLLVGYTADAD 2634
>gi|218532895|ref|YP_002423711.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|218525198|gb|ACK85783.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
Length = 763
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 14/147 (9%)
Query: 226 GGDDLLDLTLIGGVKNYI-DLNTESWSSIG---GYEKNMTIAQHTVIESVVGSSGNDVVI 281
G +DL+D L G ++YI DL+ G E+ + ++ G+D +
Sbjct: 175 GSEDLMDPYLGWGQRSYISDLDLAMLQDKGMPISTERADKMWLGNRADTFFAYGGDDWID 234
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY----------KIYRFENAIIVYDAN 331
G ++ F +GND G +G DT +Y ++ +
Sbjct: 235 GGWGDDKLFGGAGNDTLIGGNGGDTLEGGEGIDRAVLTGRSQDYVALYGAAGSLAIKHLG 294
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQ 358
D LS +E L F D + +
Sbjct: 295 SGSIDTLSSIETLNFDDTVLGMSGLLA 321
>gi|149203389|ref|ZP_01880359.1| Animal haem peroxidase [Roseovarius sp. TM1035]
gi|149143222|gb|EDM31261.1| Animal haem peroxidase [Roseovarius sp. TM1035]
Length = 3045
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 18/152 (11%)
Query: 245 LNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
LN ++S+ + G N + T + G GND + GN +++ +GNDV +G +
Sbjct: 1690 LNGTTFSNNSLNGSAGNDLL---TGVSPFFGVGGNDTLNGNGGDDILNGQAGNDVLNGGA 1746
Query: 303 GLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G D + I + A+ +D + D N
Sbjct: 1747 GFDQLDGGGGADVLNGGADDDIIIAGGGTDTIIQASTDGRDVVDGG---TGNDTFRVQGN 1803
Query: 356 VKQRSILEYT---ASYEDLIQVIGQDVFESMK 384
+ + Y L +G S +
Sbjct: 1804 AEAETFTVYAMSGGQNAGLAASLGTSFLASTE 1835
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 45/149 (30%), Gaps = 10/149 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I I ++V+ SG D++ G+ N+ F G+D +G +G D A
Sbjct: 2794 NILALAGRDMIFAGDGDDNVLAGSGRDMIFGDGGNDRLFGEGGDDFIEGGAGNDFVVGGA 2853
Query: 312 PSYLYKIY---RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ L+ + D L + Y +S
Sbjct: 2854 GADLFVATMNDGDDVYYGDDVTGGSGSDTL----DMSQITADTSVDLGSASGGRGYASSA 2909
Query: 369 ---EDLIQVIGQDVFESMKHFYEFGLSEG 394
D++ I + + G ++
Sbjct: 2910 QSGNDVLWSIESFIGGAGNDTITAGSAQN 2938
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 56/164 (34%), Gaps = 14/164 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IESVVGSSGNDVVIG 282
G D LD++ I +DL S S GY + + IES +G +GND +
Sbjct: 2877 GSGSDTLDMSQIT-ADTSVDL--GSASGGRGYASSAQSGNDVLWSIESFIGGAGNDTITA 2933
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
SA N GNDV+ F + + I FE + + S
Sbjct: 2934 GSAQNEMDGGVGNDVY-------RFLSASDADGDTISSFEPGDKIDLSQIDANG--SGPG 2984
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ F Q + T + D+ + G ++ F
Sbjct: 2985 KGTFTLVSEAFSGGGQILVTHETGANGDVTVIQGNIEGDNGPDF 3028
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 10/157 (6%)
Query: 225 SGGDDLLDLTLI------GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
GG+D++ + G + + + + G I V G SG+D
Sbjct: 1171 GGGNDIILDSGDEGDFLKGEGGDDVMASANGLDVLMGGTGKDVIFLGVDSSEVFGGSGDD 1230
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
++G + + + G+D + G DT + + ++ ++EH D
Sbjct: 1231 FIMGGAGADFLLGNEGDDWMEADGGFDTTAGDNSELFFNSKIIGHDVMFAGSDEHDFDAE 1290
Query: 339 SDVERLRFADQCIDSVNVKQRSILEY----TASYEDL 371
S + + + + + + + Y +Y D+
Sbjct: 1291 SGDDIMVQGESVMRNEGMFGFDWVSYKGVAIDAYADM 1327
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 14/153 (9%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS 252
+ NN + + GG+D L D L G N + +
Sbjct: 1691 NGTTFSNNSLNGSAGNDLLTGVSPFFGVGGNDTLNGNGGDDILNGQAGNDVLNGGAGFDQ 1750
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF--YY 310
+ G + + ++ G D +I S + G DV DG +G DTF
Sbjct: 1751 LDGGGGADVLNGGADDDIIIAGGGTDTIIQASTD-------GRDVVDGGTGNDTFRVQGN 1803
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
A + + +Y A FL+ E
Sbjct: 1804 AEAETFTVYAMSGGQNAGLAASLGTSFLASTEI 1836
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 27/75 (36%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + ++++ +G D++ ++ SG D+ G G D F
Sbjct: 2776 NVIGTAAADALFGGAEGDNILALAGRDMIFAGDGDDNVLAGSGRDMIFGDGGNDRLFGEG 2835
Query: 312 PSYLYKIYRFENAII 326
+ + ++
Sbjct: 2836 GDDFIEGGAGNDFVV 2850
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 14/141 (9%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVF------FESSGNDVFDGSSGLDTFFYYAPS 313
+ +A++T + + N+ + G++ N++ F GND +G+ G D A +
Sbjct: 1680 LAVAENTGVTLNGTTFSNNSLNGSAGNDLLTGVSPFFGVGGNDTLNGNGGDDILNGQAGN 1739
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILE--YTASYE 369
A D L+ + + A D++ + +
Sbjct: 1740 D----VLNGGAGFDQLDGGGGADVLNGGADDDIIIAGGGTDTIIQASTDGRDVVDGGTGN 1795
Query: 370 DLIQVIGQDVFESMKHFYEFG 390
D +V G E+ + G
Sbjct: 1796 DTFRVQGNAEAETFTVYAMSG 1816
>gi|289627794|ref|ZP_06460748.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|330867311|gb|EGH02020.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 1605
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G +G D + +
Sbjct: 1452 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGGSGADTLIGGTG 1509
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+ + ++NE L D+
Sbjct: 1510 ADRYVFNNSNETGLGGLRDI 1529
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 5/133 (3%)
Query: 232 DLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D T ++ I++ + ++ G E + ++++G G+D + G++ ++
Sbjct: 772 DATGASVADSFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIIN 831
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D G G DTF Y + Y+ Y A + DF +++ +
Sbjct: 832 GGAGRDALYGGDGADTFVYSTLTDSYRDYDAGG----LTATDTIYDFTPGQDKIDVSALG 887
Query: 351 IDSVNVKQRSILE 363
+ + L
Sbjct: 888 FLGLANGEDHTLY 900
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + ++++ AS L G D+
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTG 1340
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GNDV+ GN+ + +G D+ +G + D A + L+ ++ Y
Sbjct: 541 DTLTGTDGNDVMNGNAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY 600
Query: 329 DANEHKQ-DFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYED 370
+A+ KQ D ++D +R+ + + + + + Y + D
Sbjct: 601 NASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 1223 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTE 1275
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + +GN +V+ GN++NNV ++G
Sbjct: 1276 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGA 1335
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 1336 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 1395
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 1396 NATGNTLDNLIYAGAGDNVMDGRDGN 1421
Score = 44.3 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 46/145 (31%), Gaps = 9/145 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA-QHTVIESVVGSSGNDVVIGN 283
G D L T +L ++ KN + + +++ G +G+DV+IG
Sbjct: 1447 GSGLDTLKGTE--------NLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGG 1498
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
S + +G D + ++ +T + E + + + + D +
Sbjct: 1499 SGADTLIGGTGADRYVFNNSNETGLGGLRDIINGFKAAEGDKLDFTGFDARPDAFVFIGN 1558
Query: 344 LRFADQCIDSVNVKQRSILEYTASY 368
F+ + +
Sbjct: 1559 AAFSANNTGELRFADGVLYGNLDDN 1583
>gi|259490994|gb|ACW82491.1| karilysin protease [Tannerella forsythia]
Length = 472
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 82/250 (32%), Gaps = 44/250 (17%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET- 73
+++L+ W+ ++Y ++H + + R A WS L+F +
Sbjct: 34 NYVLQGSKWNKTTLKYYIYNSSSHLTT-------TERENAIRSAFALWSDKSTLSFIQVY 86
Query: 74 -SIHSDIKF------------ISSNNG----YVCTPRYDSRYFMEINFDKADVWRYGIGK 116
+DIK N G P Y ++FD + W G
Sbjct: 87 NPNQADIKIKWEKGNHGDGYPFDGNTGILAHAFYPPPAGGNYAGHLHFDDDENWSIN-GS 145
Query: 117 GTILSHNALHEIGHALGLMHPGSYNG-GYPVY-GVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A HEIGH LG+ H + YP Y G+ +ND L +
Sbjct: 146 GIDLITVAAHEIGHLLGIEHSNVSSALMYPYYTGIKRQLDNDDCLA------------VW 193
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+GY + V Q Y G + +P I TI S G
Sbjct: 194 DLYGYPFSISGPSSVCDQATYTVENLLSGATV----QWSVSNPNIATINSSNGVLTCRGN 249
Query: 235 LIGGVKNYID 244
I V+ I+
Sbjct: 250 GICEVRATIN 259
>gi|332162352|ref|YP_004298929.1| putative serine protease [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666582|gb|ADZ43226.1| putative serine protease [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 1806
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA-QHTVI 268
V K T+ GDD+L G I + ++ G + +A Q ++I
Sbjct: 667 SVFIKGGRGNTTLVGGDGDDVL--AGGIGKNTIIGGSGKAVIYAGPQGDTIYVAEQGSII 724
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G D + G N+V GN + DG G++ + Y I R ++ +
Sbjct: 725 ---HAGGGADKIYGGKGNDVIEAGQGNALIDGGGGINVVSLHGTHADYIITRTDSGYQIR 781
Query: 329 D--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D A L ++++L F+D + ++
Sbjct: 782 DKVAGRDGTLALKNIQKLNFSDISAIDLQEDTIVPID 818
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 196 GAPKG--SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-NTESWSS 252
G+ + G++++ I +GG D + ++G +++ + +
Sbjct: 598 GSNTYVGNRGDDVFVISASDDPKNIK----GNGGRDTV--LIVGKKAVTLNMARSGVTLA 651
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
GG ++ I+ + G GN ++G ++V G + G SG YA
Sbjct: 652 QGGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDDVLAGGIGKNTIIGGSG--KAVIYAG 709
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
IY E I++ D + + + +++ ++
Sbjct: 710 PQGDTIYVAEQGSIIHAG--GGADKIYGGKGNDVIEAGQGNALIDGGGGINVVSLHGTHA 767
Query: 370 D 370
D
Sbjct: 768 D 768
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 72/197 (36%), Gaps = 30/197 (15%)
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY----KIEVQQKDSPFIQTIYDS--- 225
DA G P + +++G S +++Y + Q + P + D+
Sbjct: 1389 QDAKNGLPIKPNSWSL----RLFGHK--STADDVYFYTDEFFDQVAEQPTRAILNDAVNG 1442
Query: 226 --GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GG + L+ I G I+L T +++GG +TI I ++V GND
Sbjct: 1443 VAGGRNTLNAAAISGA-VKINLVTGE-ANLGGTT--LTINSPQTIHNIVSGDGND----- 1493
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
V N + DG G +T A ++ + + + D +
Sbjct: 1494 ----VLTAGRNNSLLDGGRGRNTLVGGAGKEIFVVRKNAGGH--DSIINFEADKGEVINL 1547
Query: 344 LRFADQCIDSVNVKQRS 360
+ FA++ + + Q+
Sbjct: 1548 VGFAEKKFSELQLSQQQ 1564
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 4/124 (3%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + ++ G SGNDV+ + + G++ + G+ G D F A I
Sbjct: 567 ANRLKVSNLYGGSGNDVLKAGTQGSWLVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNG 626
Query: 323 NAIIVYDANEHKQDF---LSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
V + S V + D + ++ L+ G D
Sbjct: 627 GRDTVLIVGKKAVTLNMARSGVTLAQGGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDD 686
Query: 379 VFES 382
V
Sbjct: 687 VLAG 690
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 21/179 (11%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKN--MTIAQHTVIESVVGSS 275
+ +Y G+D+L G L S+ G + I+ +++ G+
Sbjct: 572 VSNLYGGSGNDVLKAGTQGSW-----LVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNG 626
Query: 276 GNDVVI-----------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G D V+ S + G+DV G ++ F + +
Sbjct: 627 GRDTVLIVGKKAVTLNMARSGVTLAQGGDGDDVIISG-GNNSVFIKGGRGNTTLVGGDGD 685
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFES 382
++ + + +A D++ V Q SI+ + + G DV E+
Sbjct: 686 DVLAGGIGKNTIIGGSGKAVIYAGPQGDTIYVAEQGSIIHAGGGADKIYGGKGNDVIEA 744
Score = 41.6 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 3/133 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SG + + N S++ G N + T +VG G++ +GN
Sbjct: 547 SGEATTTAYAQLTNRHRVLSANRLKVSNLYGGSGNDVLKAGTQGSWLVGRGGSNTYVGNR 606
Query: 285 ANNVFFESSGND--VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++VF S+ +D G+ G DT + + + + + +S
Sbjct: 607 GDDVFVISASDDPKNIKGNGGRDTVLI-VGKKAVTLNMARSGVTLAQGGDGDDVIISGGN 665
Query: 343 RLRFADQCIDSVN 355
F +
Sbjct: 666 NSVFIKGGRGNTT 678
>gi|167468166|ref|ZP_02332870.1| virulence determinant [Yersinia pestis FV-1]
Length = 2984
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 2047 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2106
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2107 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2164
Query: 312 PSYL 315
Sbjct: 2165 GLAQ 2168
Score = 44.7 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2468 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2524
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2525 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2573
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2574 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2628
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2629 VEDSQITFDELFSLRPYSD 2647
>gi|115385970|ref|NP_114396.3| interstitial collagenase B precursor [Mus musculus]
gi|148692987|gb|EDL24934.1| matrix metallopeptidase 1b (interstitial collagenase) [Mus
musculus]
gi|148921988|gb|AAI46302.1| Matrix metallopeptidase 1b (interstitial collagenase) [synthetic
construct]
gi|151555539|gb|AAI48745.1| Matrix metallopeptidase 1b (interstitial collagenase) [synthetic
construct]
Length = 463
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 65/210 (30%), Gaps = 52/210 (24%)
Query: 5 KPVYTTERIADHLLRDQ--YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A + + W+ + Y T + + +AR A W
Sbjct: 86 KPRCGVPDVAPYAITHNNPRWTKTHLTYSILNYTPYLSKAVV------EDAIAR-AFRVW 138
Query: 63 SKVVDLTFEET-------------SIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKAD 108
S V LTF+ H D+ F S + +++D
Sbjct: 139 SDVTPLTFQRVFEEEGDIVLSFHRGDHGDLYTFDGSKYHFAHAFLPGLGLGGNVHYDLDQ 198
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY-FM 167
W + L + HE+GH+LGL H ND SY +
Sbjct: 199 KWTDN-NEDFNLFYVTAHELGHSLGLSHS-----------------NDEEALMFPSYTWS 240
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+D +++ DI +Q +YG
Sbjct: 241 NKDFVLNQ----------DDINRIQALYGP 260
>gi|304320918|ref|YP_003854561.1| putative hemolysin-adenlyate cyclase protein [Parvularcula
bermudensis HTCC2503]
gi|303299820|gb|ADM09419.1| putative hemolysin-adenlyate cyclase protein [Parvularcula
bermudensis HTCC2503]
Length = 644
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 16/161 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNM-TIAQHTVIESVVGSSGNDV 279
+ G D +D + I D+ + S N T IE+ +G SG D+
Sbjct: 266 LIGGQGYDTVDFSQIAK-----DVRAALTPSDKSRVTLNGETTLYIEGIENAIGGSGADM 320
Query: 280 VIGNSANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G +N+ + G+D DG +G DT Y + E A
Sbjct: 321 FSGGDGSNILLGNGGDDELKGGHGPDKLDGGAGDDTVDYSYTDKALILTLAEGAYTAPFV 380
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++D L D+E + + + + + + + +
Sbjct: 381 GSIQEDVLRDLENVIGGNGDDIVIGDDRPNRFDAGSGNDTF 421
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 60/169 (35%), Gaps = 13/169 (7%)
Query: 224 DSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G GDD +D + + L ++ + ++ +E+V+G +G+D+VIG
Sbjct: 349 DGGAGDDTVDYS-YTDKALILTLAEGAY--TAPFVGSIQEDVLRDLENVIGGNGDDIVIG 405
Query: 283 NSANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ N F SGND F GS G DT Y +
Sbjct: 406 DDRPNRFDAGSGNDTFQGGGGVDVFGGSRGNDTASYADQVLSVSVTLASYDSARVYIGGV 465
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L +VE L + + + + L+ G D+ E
Sbjct: 466 PDDILKNVENLIGGSGDDYLAGDENGNAILGGPGDDLLMGEGGNDLLEG 514
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 9/133 (6%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
S GN+ Q YDS IGGV + I N E ++ G +
Sbjct: 433 SRGNDTASYADQVLSVSVTLASYDSA------RVYIGGVPDDILKNVE---NLIGGSGDD 483
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+A +++G G+D+++G N++ G+D G G D +
Sbjct: 484 YLAGDENGNAILGGPGDDLLMGEGGNDLLEGGEGSDRLIGGGGNDELIGGLSKDVMIGGP 543
Query: 321 FENAIIVYDANEH 333
+ +I Y A +
Sbjct: 544 GSDRMIYYSAEDS 556
>gi|289651269|ref|ZP_06482612.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. aesculi str. 2250]
Length = 1605
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G +G D + +
Sbjct: 1452 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGGSGADTLIGGTG 1509
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+ + ++NE L D+
Sbjct: 1510 ADRYVFNNSNETGLGGLRDI 1529
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 5/133 (3%)
Query: 232 DLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D T ++ I++ + ++ G E + ++++G G+D + G++ ++
Sbjct: 772 DATGASVADSFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIIN 831
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D G G DTF Y + Y+ Y A + DF +++ +
Sbjct: 832 GGAGRDALYGGDGADTFVYSTLTDSYRDYDAGG----LTATDTIYDFTPGQDKIDVSALG 887
Query: 351 IDSVNVKQRSILE 363
+ + L
Sbjct: 888 FLGLANGEDHTLY 900
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + ++++ AS L G D+
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTG 1340
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GNDV+ GN+ + +G D+ +G + D A + L+ ++ Y
Sbjct: 541 DTLTGTDGNDVMNGNAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY 600
Query: 329 DANEHKQ-DFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYED 370
+A+ KQ D ++D +R+ + + + + + Y + D
Sbjct: 601 NASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 1223 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTE 1275
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + +GN +V+ GN++NNV ++G
Sbjct: 1276 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGA 1335
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 1336 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 1395
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 1396 NATGNTLDNLIYAGAGDNVMDGRDGN 1421
Score = 44.3 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 46/145 (31%), Gaps = 9/145 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA-QHTVIESVVGSSGNDVVIGN 283
G D L T +L ++ KN + + +++ G +G+DV+IG
Sbjct: 1447 GSGLDTLKGTE--------NLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGG 1498
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
S + +G D + ++ +T + E + + + + D +
Sbjct: 1499 SGADTLIGGTGADRYVFNNSNETGLGGLRDIINGFKAAEGDKLDFTGFDARPDAFVFIGN 1558
Query: 344 LRFADQCIDSVNVKQRSILEYTASY 368
F+ + +
Sbjct: 1559 AAFSANNTGELRFADGVLYGNLDDN 1583
>gi|1935025|gb|AAB51753.1| membrane-type matrix metalloproteinase 1 [Mus musculus]
Length = 582
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 51/173 (29%), Gaps = 49/173 (28%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSA------ 255
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+MS F MD D +Q++YG+ GS
Sbjct: 256 -------------IMSPFYQ---WMDTENFVLP---DDDRRGIQQLYGSKSGS 289
>gi|330809471|ref|YP_004353933.1| mannuronan C-5-epimerase, multi-domains protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327377579|gb|AEA68929.1| Putative mannuronan C-5-epimerase, multi-domains protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 1870
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 57/156 (36%), Gaps = 18/156 (11%)
Query: 200 GSLGNNIYKI------EVQQKDSPFIQTIYDSGGDDLLDLTL--------IGGVKNYIDL 245
+LGNN+ + + T++ G+++LD ++L
Sbjct: 1637 YTLGNNVENLYVDSTGAANGTGNALDNTLFAGAGNNVLDGRDGIDTASFERALSSVTVNL 1696
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+T + + G + IE++ GS+ D + GNSA NV +GND G SG D
Sbjct: 1697 STSAQQNTVGSGLDTL----KFIENLKGSAYADTLSGNSAANVLDGGAGNDTLVGGSGDD 1752
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
A + + ++ L DV
Sbjct: 1753 RLIGGAGTDNLTGGTGADTYAFGALSDMGVGALRDV 1788
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 10/139 (7%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGGYEKNM 260
+ Y + + +D I + + T G Y D + S + ++ G N
Sbjct: 336 STYGVAERNEDGTDRNAIIA----NTISHTSKGATLVYGDGSYVSATVPMTTVQGTAGND 391
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--I 318
T+ E G +GND + G + +++ +G D G +G DTF + A S Y+
Sbjct: 392 TLLGSAANEIFYGGAGNDTINGAAGSDILVGGAGIDKLTGGTGADTFRFVAQSDSYRNAT 451
Query: 319 YRFENAIIVYDANEHKQDF 337
F++ I +D + K D
Sbjct: 452 TSFDDTITDFDVTQDKIDL 470
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 52/161 (32%), Gaps = 9/161 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T +G D+L D + N+ + ++ ++ N
Sbjct: 1003 SFNATSLTFSGTPTSTAAGNYDVLVKATDPSGASVSDNFALVVADAPANTITGTNNAETL 1062
Query: 264 QHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T + ++G GND + + ++ +G D G G DTF Y S Y+ Y
Sbjct: 1063 NGTTGADLILGLGGNDTIKAGTGADIVDGGAGRDSLYGGDGADTFRYSNLSDSYRDYDTG 1122
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A + DF V+++ + + L
Sbjct: 1123 G----VTATDTIYDFTVGVDKIDVSGLGFLGLGDGSNGTLY 1159
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N T+ E + G +GND + G + N++ +G D G +G D F Y +
Sbjct: 795 INGTPNNDTLTGTAANEQLFGGAGNDTLNGGAGNDILVGGTGVDKLTGGTGADVFRYTSK 854
Query: 313 SYLYKIYRFENAIIVYD 329
Y+ + + D
Sbjct: 855 LDSYRTSSTSASDQILD 871
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 75/202 (37%), Gaps = 9/202 (4%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
SY S D + T D+ + G G G ++ ++ +
Sbjct: 446 SYRNATTSFDDTITDFDVTQDKIDLAGLGFT-GLGNGRGG--TLQVSYSASNNRTYIKDF 502
Query: 224 DSGGD-DLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
D+ + +L L G + + + + ++ I G + ++ ++++G +GND +
Sbjct: 503 DADASGNRFELILSGNLASTLTASNFIFNRVITGTSGSDSLLGSDAADTLLGLAGNDSLS 562
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + ++ +G D G +G DTF + Y+ Y A + + DF
Sbjct: 563 GGAGDDKLDGGAGMDTLTGGAGADTFVFSNRLDSYRNYNTGGA----NLGDLITDFDISA 618
Query: 342 ERLRFADQCIDSVNVKQRSILE 363
+++ + + + + +
Sbjct: 619 DKIDLSAMGFTGLGDGKNNTVY 640
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 5/159 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ--HTVIESVVGSS-GNDVVI 281
SGGD + + I+ N+ + S + A +E++ S G
Sbjct: 1598 SGGDGNDSYFVDNADDSVIETNSNTVSGGIDSVHSSLAAYTLGNNVENLYVDSTGAANGT 1657
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN+ +N F +GN+V DG G+DT + + +A + D L +
Sbjct: 1658 GNALDNTLFAGAGNNVLDGRDGIDTASFERALSSVTVNLSTSA--QQNTVGSGLDTLKFI 1715
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
E L+ + ++L+ A + L+ G D
Sbjct: 1716 ENLKGSAYADTLSGNSAANVLDGGAGNDTLVGGSGDDRL 1754
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I +++ G++ N+ + G + N+ +GND+ G +G+D + +++
Sbjct: 793 IVINGTPNNDTLTGTAANEQLFGGAGNDTLNGGAGNDILVGGTGVDKLTGGTGADVFRYT 852
Query: 320 RFENAIIVYDANEHKQDFLSDVE 342
++ ++ D + D +
Sbjct: 853 SKLDSY--RTSSTSASDQILDFD 873
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 25/121 (20%)
Query: 220 QTIYDSGGDDLLD-----LTLIGGVKNYIDL----------NTESWSSIGGYEKNMTIAQ 264
T+ S G+D L+ TL GG N I + S S I + +++
Sbjct: 1494 DTLVGSSGNDTLNGDLGADTLTGGDGNDIYVVDNAFDSVVETNTSLSQIDTVQASVSWTL 1553
Query: 265 HTVIESV-------VGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+E++ + +GN + + GN+ANNV ++G D G G D++F
Sbjct: 1554 GANLENLVLTGVSDIDGTGNERRNFITGNAANNVLDGAAGADSMSGGDGNDSYFVDNADD 1613
Query: 315 L 315
Sbjct: 1614 S 1614
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 12/127 (9%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++ G ++ G ++ SSGND +G G DT + +Y + +++
Sbjct: 1475 DIFDNAQNQGG--MISGTDQDDTLVGSSGNDTLNGDLGADTLTGGDGNDIYVVDNAFDSV 1532
Query: 326 IVYDANEHKQDFLS---------DVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVI 375
+ + + + D + ++E L ID ++R+ + A+ L
Sbjct: 1533 VETNTSLSQIDTVQASVSWTLGANLENLVLTGVSDIDGTGNERRNFITGNAANNVLDGAA 1592
Query: 376 GQDVFES 382
G D
Sbjct: 1593 GADSMSG 1599
Score = 45.1 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 40/89 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +++ G +GND+++G + + +G DVF +S LD++ +
Sbjct: 803 TLTGTAANEQLFGGAGNDTLNGGAGNDILVGGTGVDKLTGGTGADVFRYTSKLDSYRTSS 862
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
S +I F+ D + L +
Sbjct: 863 TSASDQILDFDLTADKIDVSALGYTGLGN 891
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 3/128 (2%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ I+ +++VGSSGND + G+ + GND++ + D+ +
Sbjct: 1479 NAQNQGGMISGTDQDDTLVGSSGNDTLNGDLGADTLTGGDGNDIYVVDNAFDSVV-ETNT 1537
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS--VNVKQRSILEYTASYEDL 371
L +I + ++ + L+ V + + ++L+ A + +
Sbjct: 1538 SLSQIDTVQASVSWTLGANLENLVLTGVSDIDGTGNERRNFITGNAANNVLDGAAGADSM 1597
Query: 372 IQVIGQDV 379
G D
Sbjct: 1598 SGGDGNDS 1605
>gi|301776492|ref|XP_002923668.1| PREDICTED: matrix metalloproteinase-28-like [Ailuropoda
melanoleuca]
Length = 635
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 44/132 (33%), Gaps = 21/132 (15%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H P + R A WS V L F E ++ +
Sbjct: 158 GSKWYKQHLSYRLVNWPQHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATVPA 210
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 211 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDRDERWTLSRRRGRNLFVVLA 270
Query: 126 HEIGHALGLMHP 137
HEIGH LGL P
Sbjct: 271 HEIGHTLGLXCP 282
>gi|301610877|ref|XP_002934977.1| PREDICTED: stromelysin-1-like [Xenopus (Silurana) tropicalis]
Length = 852
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 63/190 (33%), Gaps = 44/190 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W N + YK TT ++ + A WS V TF + S+I+
Sbjct: 108 WQNKNLTYKILNYTTTMAKNEVDW-------AIQKAFKIWSDVTLFTFTRIYDNVSNIEI 160
Query: 82 ISSNNGYVCTPRYDSRYFM----------EINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + +D + +++FD + W G G L + A HEIGH
Sbjct: 161 SFVSRDHNDHHPFDGPSGILAHAFAPKNGQLHFDNDEKWTNG-SHGENLFNVATHEIGHL 219
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL H N +Y + + ++ S DI +
Sbjct: 220 LGLYHSNDSNA--VMYQFYREVDPNALQLS-----------------------KDDIDGI 254
Query: 192 QKIYGAPKGS 201
Q +YG K
Sbjct: 255 QSLYGVKKNP 264
>gi|281341936|gb|EFB17520.1| hypothetical protein PANDA_012844 [Ailuropoda melanoleuca]
Length = 493
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 44/132 (33%), Gaps = 21/132 (15%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHS 77
W + Y+ H P + R A WS V L F E ++ +
Sbjct: 91 GSKWYKQHLSYRLVNWPQHLPE-------PAVRGAVRAAFQLWSNVSALEFWEAPATVPA 143
Query: 78 DIKFISS--------NNGYVCTPRYDSRYF----MEINFDKADVWRYGIGKGTILSHNAL 125
DI+ N + + F E +FD+ + W +G L
Sbjct: 144 DIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDRDERWTLSRRRGRNLFVVLA 203
Query: 126 HEIGHALGLMHP 137
HEIGH LGL P
Sbjct: 204 HEIGHTLGLXCP 215
>gi|126335321|ref|XP_001371136.1| PREDICTED: similar to Purinergic receptor P2Y, G-protein coupled, 5
[Monodelphis domestica]
Length = 569
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 72/204 (35%), Gaps = 49/204 (24%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEE 72
L+R + ++ +K L SF + + +Q+ R +AL W V +TFEE
Sbjct: 107 LVRRRRYALTGSFWKKKKLFWWVQSFPQS--SALSQDTVRSLMYYALNAWGTEVGMTFEE 164
Query: 73 TSIHSD------IKFI---------SSNNGYVCTPRYDSRYFM---EINFDKADVWRYGI 114
+ I F G + + +FD +VW +G
Sbjct: 165 AEPRAGMEPELLIDFARAYHKDSYPFDGPGGTLAHAFFPGDHPISGDTHFDDEEVWTFGA 224
Query: 115 --GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G GT L A+HE GHALGL H + + S+M F +
Sbjct: 225 SDGSGTDLFAVAVHEFGHALGLAHSSAPD-------------------SIMRPFYQGPAG 265
Query: 173 MDASFGYCATPMVSDIVAVQKIYG 196
+ + D +Q++YG
Sbjct: 266 DPSKYQLPH----DDREGIQQLYG 285
>gi|26990554|ref|NP_745979.1| calcium-binding protein, hemolysin-type [Pseudomonas putida KT2440]
gi|24985534|gb|AAN69443.1|AE016580_2 calcium-binding protein, hemolysin-type [Pseudomonas putida KT2440]
Length = 768
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 67/198 (33%), Gaps = 18/198 (9%)
Query: 194 IYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDL 245
+YG +L N + T+ G+D D + ID
Sbjct: 533 LYG-NGNNLANTLTGNNGDNVLNGGAGADTMIGGLGNDTYYVDWGNDKVIETSANGGIDT 591
Query: 246 NTESWS-SIGGYEKNMTI-------AQHTVIESVVGSSGNDVVI-GNSANNVFFESSGND 296
S S ++G +++N+ + +++ + +G D ++ G + N+ +GND
Sbjct: 592 VISSVSRTLGDHQENLVLTGTKANYGTGNSLDNTLTGNGADNLLNGGAGNDTLVGGAGND 651
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D A + ++ + + + A + DF +++ + ++
Sbjct: 652 RLVGDLGKDVLTGGAGNDVFAFNTTKESGLTSTAWDVITDFKRGSDKIDVSGIDANTTTN 711
Query: 357 KQRSILEYTASYEDLIQV 374
+ + +
Sbjct: 712 TNEAFNVVLSGAKTFTAA 729
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 15/166 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G D +++ + GG+ I + + +G Y++N+ + + I + G++ + + G
Sbjct: 409 VDWGNDKVIETSSAGGIDTVISSVSRT---LGAYQENLVLTGSSAI-NGTGNNLANTLTG 464
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N A+NV +G D+ G G DT++ + I N I + + E
Sbjct: 465 NDADNVLNGGAGADIMVGGLGNDTYYVDWGNDKV-IETSANGGIDTIISSVSRTLGDYQE 523
Query: 343 RLRFADQCI----------DSVNVKQRSILEYTASYEDLIQVIGQD 378
L ++L A + +I +G D
Sbjct: 524 NLVLTGTAALYGNGNNLANTLTGNNGDNVLNGGAGADTMIGGLGND 569
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 29/191 (15%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G LGN+ Y + D G D +++ + GG+ I + + +G Y++N
Sbjct: 482 GGLGNDTYYV--------------DWGNDKVIETSANGGIDTIISSVSRT---LGDYQEN 524
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + T G++ + + GN+ +NV +G D G G DT++ + I
Sbjct: 525 LVL-TGTAALYGNGNNLANTLTGNNGDNVLNGGAGADTMIGGLGNDTYYVDWGNDKV-IE 582
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCI----------DSVNVKQRSILEYTASYE 369
N I + + E L ++L A +
Sbjct: 583 TSANGGIDTVISSVSRTLGDHQENLVLTGTKANYGTGNSLDNTLTGNGADNLLNGGAGND 642
Query: 370 DLIQVIGQDVF 380
L+ G D
Sbjct: 643 TLVGGAGNDRL 653
>gi|332708027|ref|ZP_08428023.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332353209|gb|EGJ32753.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 397
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 9/157 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ + G+DLLD +L+GG + L + + G +
Sbjct: 213 NDTLLGGNGNDTLEGNSGNDLLDGGAGNDSLVGGDNSDTLLGGDGNDVLDGGTNGDFLDG 272
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G +D +IG N+ F +G+D+ +G G D Y + E
Sbjct: 273 GAGNDNLSGGENSDTLIGAEGNDSLFGGNGDDILEGGLGNDILSGAGGIDTYVLNPGEGT 332
Query: 325 IIVYDANEHKQDFLSD----VERLRFADQCIDSVNVK 357
V+ + F ++L AD ++
Sbjct: 333 DTVFSFEDGIDMFKLGGDLTFDQLAIADMGATTITAN 369
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 34/84 (40%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D T+IG +N L ++ G N + +S+VG +D ++G N+V
Sbjct: 204 DSTVIGTFQNDTLLGGNGNDTLEGNSGNDLLDGGAGNDSLVGGDNSDTLLGGDGNDVLDG 263
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYL 315
+ D DG +G D S
Sbjct: 264 GTNGDFLDGGAGNDNLSGGENSDT 287
>gi|301610867|ref|XP_002934967.1| PREDICTED: matrix metalloproteinase-20-like [Xenopus (Silurana)
tropicalis]
Length = 478
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 50/145 (34%), Gaps = 23/145 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T+ + D+ L WS L F +T+ +DI
Sbjct: 116 WQRSSLTYRITKYTSSLSTQDV-------DRAVDLGLKAWSDAAPLNFIKTTQGEADIMI 168
Query: 82 ISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + +D + +FD A+ W G G L A HE
Sbjct: 169 SFESGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAERWTTGKN-GFNLFTVAAHEF 227
Query: 129 GHALGLMHPGSYNG-GYPVYGVDND 152
GHALGL H + YP Y +
Sbjct: 228 GHALGLGHSSDPSALMYPTYRYQHP 252
>gi|126327142|ref|XP_001366839.1| PREDICTED: similar to matrix metalloproteinase-12 [Monodelphis
domestica]
Length = 472
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 55/195 (28%), Gaps = 49/195 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI- 79
W Y + Y+ T D+ + A WS V LTF + +DI
Sbjct: 107 TWKKYDLTYRIMNYTPDMTRDDVDY-------AIKRAFEVWSNVTPLTFRRIYTGEADIM 159
Query: 80 ------------KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
F + + +FD+ + W + +G L A HE
Sbjct: 160 ISFASGVHGDFSPFDGRDGTLAHAYAPGPGIGGDAHFDEDESWTRDL-RGYNLFLVAAHE 218
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GH+LGL H YP Y D
Sbjct: 219 FGHSLGLDHSNDPQALMYPTYRRA-----DPRQF---------------------RLSHD 252
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YG P
Sbjct: 253 DIKGIQALYGGPVNH 267
>gi|66046318|ref|YP_236159.1| hemolysin-type calcium-binding region:haemolysin-type calcium binding
related [Pseudomonas syringae pv. syringae B728a]
gi|63257025|gb|AAY38121.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Pseudomonas syringae pv. syringae B728a]
Length = 2689
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG-YEKNMTIAQHTVIESVVGSS 275
+++ GG D +L GG D + + YE N + +++ G+
Sbjct: 1085 AGNDSLWGGGGSD----SLYGGEGA--DFLEGDFPGLTTLYEGNDYLDGGNGEDTLQGAG 1138
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D + G + N+V F G++V +G G D + +Y + A + D+ + +
Sbjct: 1139 GDDTLFGGNDNDVLFGGMGDNVLEGGQGNDFISASTGNDVYLFNSGDGADTIEDSGGNNK 1198
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
F +F+ ++ +Y + L
Sbjct: 1199 IFFGG----KFSVDSLEVRISTPSLGQQYLHVGDSL 1230
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 13/129 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN Y + ++ S DD L L + + + G N +
Sbjct: 473 GNTTYNTLYVNEGIDRQSILFGSQADDNL-------------LGSLARDHLYGESGNDYL 519
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G GND + G ++ G D G SG D A Y ++ +
Sbjct: 520 YGGDGDDLLEGGEGNDHLNGGRDDDRLIGMGGADTLTGGSGNDQLEGGAGIDTYSFFKGD 579
Query: 323 NAIIVYDAN 331
+ D +
Sbjct: 580 GLDHIIDGD 588
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + I V + + G +G+D ++G ++ +GND+ G G D +Y
Sbjct: 2345 DTDSVINGSDVRDDIFGFNGSDTLLGRGGDDRLSGGNGNDLLSGGLGNDRLIGGRGDDVY 2404
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV 341
+ + ++ D +D L V
Sbjct: 2405 VFAKGDGQDVI-DNAGGGKDILRLV 2428
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 17/180 (9%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKN-----YIDLNTESWSSIGGYEKNMTIAQHTVIESV- 271
T+ GDD L IGG+ N DL T + ++ + + V
Sbjct: 827 GADTLAGGNGDDFLGGDEIGGIPNADWSFTTDLQTNGLMLLKTFKAGLNDDIEDGGDDVM 886
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +GND++ G+ N+ SGND+ DG+ G DT F + D+
Sbjct: 887 YGGAGNDMLWGSFGNDYLSGDSGNDILDGNDGNDTLFGGTGDD----------FLAGDSR 936
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFG 390
+ + + L D + +L + L + F + G
Sbjct: 937 DASGNLGKGADYLDGGDGNDQLIGSALNDVLIGGDGNDTLWGDNFFGADNLPGQDFLDGG 996
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 56/211 (26%), Gaps = 40/211 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID---LNTESWSS-IGGYEKNMTIAQH 265
Q S + G+D L G N L+ S + G + N T+
Sbjct: 955 NDQLIGSALNDVLIGGDGNDTLWGDNFFGADNLPGQDFLDGGDGSDYLMGGQDNDTLYGG 1014
Query: 266 TVIESVVGS--------SGNDVVIGNSANNVFFESSGNDVFDGS---------------- 301
T + + G GND++ G N+ GND G
Sbjct: 1015 TGEDFLFGDDPSVPKAQQGNDLLYGGEGNDEIQGMGGNDSLYGGSENDTLLGDGRDVAAE 1074
Query: 302 ----------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G D+ + S +Y E A + + L +
Sbjct: 1075 SHGDDLIFGEAGNDSLWGGGGSD--SLYGGEGADFLEGDFPGLTTLYEGNDYLDGGNGED 1132
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L + L +G +V E
Sbjct: 1133 TLQGAGGDDTLFGGNDNDVLFGGMGDNVLEG 1163
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ I+ ++ S I G + I ++++G G+D + G + N++ GND
Sbjct: 2335 AYDSRINDLPDTDSVINGSDVRDDIFGFNGSDTLLGRGGDDRLSGGNGNDLLSGGLGNDR 2394
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G G D + + I +
Sbjct: 2395 LIGGRGDDVYVFAKGDGQDVIDNAGGGKDIL 2425
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 20/107 (18%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG----------------- 294
+I G + + + + + G GND ++G ++ + G
Sbjct: 1437 TITGTDADDQLDGKDGADLIYGGLGNDSIVGGQGDDTLYGGQGDDHLYGGDGDDRLDGGS 1496
Query: 295 -NDVFDGSSGLDTFFYYAPSYLYKIYRFE--NAIIVYDANEHKQDFL 338
NDV +G +G +TF++ N +++ ++ D L
Sbjct: 1497 GNDVLEGGAGDNTFYFSRGMENDTFIADGASNNTLIFGSDYKLSDVL 1543
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 87/249 (34%), Gaps = 16/249 (6%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--IVAVQKIYG 196
G Y V+ + +D SV ++P ++ + + +D I +G
Sbjct: 1307 DGGEGADTYIVNANDGDDIISDSV---WVPASTVTPPTIEQTTNAVAADSDISGNVVRFG 1363
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ N ++K + + Y G LT++GG ++ I + + S+ +
Sbjct: 1364 -QGITRDNVLFKEALTFSLQKVLLVEYPGG-----SLTILGGFESVIAKYSFADGSVLTH 1417
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
M I T V S+G D + G A++ G D+ G G D+
Sbjct: 1418 ADVMKIVSSTP---AVSSNGADTITGTDADDQLDGKDGADLIYGGLGNDSIVGGQGDDTL 1474
Query: 317 KIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ + D ++ + +E + S ++ + + AS LI
Sbjct: 1475 YGGQGDDHLYGGDGDDRLDGGSGNDVLEGGAGDNTFYFSRGMENDTFIADGASNNTLIFG 1534
Query: 375 IGQDVFESM 383
+ + +
Sbjct: 1535 SDYKLSDVL 1543
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 35/163 (21%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN----------------- 241
S GN++Y TI DSGG++ + V +
Sbjct: 1171 SASTGNDVYLFN----SGDGADTIEDSGGNNKIFFGGKFSVDSLEVRISTPSLGQQYLHV 1226
Query: 242 ------YIDL-NTESWS-SIGGYEKNMTIAQHTVI---ESVVGSSG---NDVVIGNSANN 287
YI L N +WS S + T++ +I E+ + +G +++V G +
Sbjct: 1227 GDSLGSYILLANMPAWSTSSFSFVDGATLSYAELIKLSENSLKYTGFEKSELVYGTMLAD 1286
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G+D +G G D + Y + + I+ D+
Sbjct: 1287 VINGEGGDDSLNGQGGDDLLDGGEGADTYIVNANDGDDIISDS 1329
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 7/129 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + + + + S G G+D + G S ++ G+D G G D
Sbjct: 715 DTPGNDNLLGLGGDDELTSRQG--GDDRLDGGSGDDTLTGGVGDDTLVGGVGADILISSD 772
Query: 312 PSYL--YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ + I+ + ++ +F ++ + D + R +L +
Sbjct: 773 GDDELYAEVETTLDDFIMSTSPKNGANFQDWLDAGKGDD---LLIGSSSRDMLLGGEGAD 829
Query: 370 DLIQVIGQD 378
L G D
Sbjct: 830 TLAGGNGDD 838
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDAN 331
GS+GND+ G+ A + S+G D G G D +F+ + YL N +V+D +
Sbjct: 2203 GSAGNDIFFGSDAPEDLYGSTGIDEVYGGGGSDRYFFSSGEYLAVHEVSGSNDTVVFDRD 2262
Query: 332 EHKQDFLSDVERL 344
S V+++
Sbjct: 2263 IDINLIASSVKKI 2275
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+ +D + G S N+V S G+D G G D + K + D++
Sbjct: 2525 RGTQSSDFIEGASGNDVLDGSGGDDYLIGGRGNDMYLNIFAGDTGKDIINNYSGTPSDSD 2584
Query: 332 EHKQDFLSDVERLRFADQCIDSV 354
++DV + FA D +
Sbjct: 2585 SLMLG-VADVRTVWFAKNNADLI 2606
Score = 38.2 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 39/193 (20%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++D+ G+D L L G + + + G + T+ +++VG G D++I
Sbjct: 713 LFDTPGNDNL---LGLGGDDELTSRQGGDDRLDGGSGDDTLTGGVGDDTLVGGVGADILI 769
Query: 282 GNSANNVFF---------------------------ESSGNDVFDGSSGLDTFFYY---- 310
+ ++ + G+D+ GSS D
Sbjct: 770 SSDGDDELYAEVETTLDDFIMSTSPKNGANFQDWLDAGKGDDLLIGSSSRDMLLGGEGAD 829
Query: 311 ---APSYLYKIYRFENAIIVYDANEHKQDFLSDVERL--RFADQCIDSVNVKQRSILEYT 365
+ + E I D ++ L F D + ++
Sbjct: 830 TLAGGNGDDFLGGDEIGGIPNADWSFTTDLQTNGLMLLKTFKAGLNDDIEDGGDDVMYGG 889
Query: 366 ASYEDLIQVIGQD 378
A + L G D
Sbjct: 890 AGNDMLWGSFGND 902
Score = 37.8 bits (86), Expect = 6.7, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 58/233 (24%), Gaps = 60/233 (25%)
Query: 200 GSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G++ + + S GDD L + + ++I S S G
Sbjct: 743 GGSGDDTLTGGVGDDTLVGGVGADILISSDGDDELYAEVETTLDDFI----MSTSPKNGA 798
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES------------------------ 292
+ + ++GSS D+++G +
Sbjct: 799 NFQDWLDAGKGDDLLIGSSSRDMLLGGEGADTLAGGNGDDFLGGDEIGGIPNADWSFTTD 858
Query: 293 ----------------------SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+DV G +G D + + Y ++
Sbjct: 859 LQTNGLMLLKTFKAGLNDDIEDGGDDVMYGGAGNDMLWGSFGND----YLSGDSGNDILD 914
Query: 331 NEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L + L + K L+ + LI DV
Sbjct: 915 GNDGNDTLFGGTGDDFLAGDSRDASGNLGKGADYLDGGDGNDQLIGSALNDVL 967
>gi|197103006|ref|NP_001124793.1| matrix metalloproteinase-14 precursor [Pongo abelii]
gi|75070961|sp|Q5RES1|MMP14_PONAB RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; Flags:
Precursor
gi|55725913|emb|CAH89736.1| hypothetical protein [Pongo abelii]
Length = 582
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIG--KGT 118
H D G++ + + +FD A+ W G G
Sbjct: 172 EKQADVMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVGNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|109108458|ref|XP_001097715.1| PREDICTED: matrix metalloproteinase-27 [Macaca mulatta]
Length = 513
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 60/189 (31%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T E + L WSKV L F + S +DI
Sbjct: 106 WRKYNLTYRIINYTPDMAR-------TAVDEAIQEGLEVWSKVTPLQFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKD-GAGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H T++M P +D Y + D
Sbjct: 218 FGHALGLSHSND-------------------QTALM---FPNYVSLDPRK-YPLS--QDD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 INGIQSIYG 261
>gi|221110593|ref|XP_002160477.1| PREDICTED: similar to matrix metalloproteinase [Hydra
magnipapillata]
Length = 628
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 76/227 (33%), Gaps = 49/227 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTF-----E 71
R + ++ ++ + +T L+ + L+ + + A +W V DLTF
Sbjct: 230 TRKKRFTLQGSKWSKNKVTWKLLNDNNDGLSRKEVETILENAFSKWEAVADLTFYKLSFT 289
Query: 72 ET-SIHSDIKFISSNNG-------------YVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
D+KF+ ++G + P + +++F+ + G
Sbjct: 290 SKEPADIDVKFVQGDHGDPYPFQPWHKIYAHAFYPYNNQGSSGDVHFNDKFNFNVKEKSG 349
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L A+HEIGH+LGL H S +S+M + +
Sbjct: 350 VSLLWIAIHEIGHSLGLHHS-------------------SVQSSLMYPTYQGNKDQNIHL 390
Query: 178 GYCATPMVSDIVAVQKIYGA---PKGSLGNNIYKIEVQQKDSPFIQT 221
DI+ +Q +YG+ P N + Q T
Sbjct: 391 H------DDDILGIQSLYGSKRKPILPSKNTV-GTNNTQVTQNKTHT 430
>gi|260820864|ref|XP_002605754.1| hypothetical protein BRAFLDRAFT_121872 [Branchiostoma floridae]
gi|229291089|gb|EEN61764.1| hypothetical protein BRAFLDRAFT_121872 [Branchiostoma floridae]
Length = 798
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 65/208 (31%), Gaps = 55/208 (26%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T ++A + W + I Y+ T D+ + + AL WS+ L
Sbjct: 380 TGGKLASYTTLGSRWRKHDITYRILNHTPDLPRADV-------ERELKKALDTWSEYTPL 432
Query: 69 TFEE--TSIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYG 113
F S SDI+ + G+ +D + +FD+++ W
Sbjct: 433 RFRRLTGSTRSDIEISFAAFGHGDGNSFDGAGGTLAHAYGPGNGIGGDSHFDESETWTIN 492
Query: 114 IGK----GTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMP 168
G G L A HE GHALGL H P Y D+
Sbjct: 493 RGSSRPRGIDLHQVAAHEFGHALGLGHSQVNTALMAPFYRYQADFRLHG----------- 541
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYG 196
DI +Q++YG
Sbjct: 542 -----------------DDIRGIQRLYG 552
>gi|257471715|pdb|2WO8|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471716|pdb|2WO8|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471717|pdb|2WO8|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471718|pdb|2WO8|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471719|pdb|2WO9|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471720|pdb|2WO9|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471721|pdb|2WO9|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471722|pdb|2WO9|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471723|pdb|2WOA|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471724|pdb|2WOA|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471725|pdb|2WOA|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471726|pdb|2WOA|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
Length = 164
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 5 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 57
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 58 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 116
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 117 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 150
Query: 188 IVAVQKIYGAPKGS 201
I +Q +YG PK +
Sbjct: 151 IRGIQSLYGDPKEN 164
>gi|254476658|ref|ZP_05090044.1| hypothetical protein RR11_2496 [Ruegeria sp. R11]
gi|214030901|gb|EEB71736.1| hypothetical protein RR11_2496 [Ruegeria sp. R11]
Length = 636
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 14/137 (10%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTL----IGGVKNYIDLNTESWSS---------- 252
Y + + T+ +D LD + + G L S +
Sbjct: 444 YTGNDALRGGRGLDTLVGGAQNDTLDGGIGHDKLFGNHGLDVLRGGSGNDTLNAGIGRDK 503
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +++ G G+D + G +V SGND +G G D F A
Sbjct: 504 LFGNHGRDILRAGSGNDTLDGGVGHDKLFGERGMDVLRGGSGNDTLNGGGGRDRLFGGAG 563
Query: 313 SYLYKIYRFENAIIVYD 329
S + +V D
Sbjct: 564 SDTFVFGANSGNDVVRD 580
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 40/133 (30%), Gaps = 5/133 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQ 264
++ + G D+L N + + + G N T+
Sbjct: 465 NDTLDGGIGHDKLFGNHGLDVLRGGSGNDTLNAGIGRDKLFGNHGRDILRAGSGNDTLDG 524
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G G DV+ G S N+ G D G +G DTF + A S + F
Sbjct: 525 GVGHDKLFGERGMDVLRGGSGNDTLNGGGGRDRLFGGAGSDTFVFGANSGNDVVRDFVAG 584
Query: 325 IIVYDANEHKQDF 337
F
Sbjct: 585 EDSVHITSGATSF 597
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 3/151 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +A +T +++ G G D ++G + N+ G+D G+ GLD +
Sbjct: 431 NLNGGLGNDRVAGYTGNDALRGGRGLDTLVGGAQNDTLDGGIGHDKLFGNHGLDVLRGGS 490
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + S + L + +L + + L
Sbjct: 491 GNDTLNAGIGRDK-LFGNHGRDILRAGSGNDTLDGGVGHDKLFGERGMDVLRGGSGNDTL 549
Query: 372 IQVIGQDV--FESMKHFYEFGLSEGRDITFD 400
G+D + + FG + G D+ D
Sbjct: 550 NGGGGRDRLFGGAGSDTFVFGANSGNDVVRD 580
>gi|11968059|ref|NP_071913.1| matrix metalloproteinase-25 preproprotein [Homo sapiens]
gi|12585274|sp|Q9NPA2|MMP25_HUMAN RecName: Full=Matrix metalloproteinase-25; Short=MMP-25; AltName:
Full=Leukolysin; AltName: Full=Membrane-type matrix
metalloproteinase 6; Short=MT-MMP 6; Short=MTMMP6;
AltName: Full=Membrane-type-6 matrix metalloproteinase;
Short=MT6-MMP; Short=MT6MMP; Flags: Precursor
gi|8052552|gb|AAF66697.2|AF145442_1 leukolysin [Homo sapiens]
gi|10441358|gb|AAG17007.1|AF185270_1 leukolysin [Homo sapiens]
gi|8546817|emb|CAB94713.1| matrix metalloproteinase-25 [Homo sapiens]
gi|9798454|emb|CAC03490.1| membrane type matrix metalloproteinase number 6 [Homo sapiens]
gi|119605819|gb|EAW85413.1| hCG15613, isoform CRA_a [Homo sapiens]
gi|119605821|gb|EAW85415.1| hCG15613, isoform CRA_a [Homo sapiens]
gi|189442380|gb|AAI67800.1| Matrix metallopeptidase 25 [synthetic construct]
Length = 562
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 68/213 (31%), Gaps = 56/213 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFE 71
+ L W + ++ ++L+ QE R +AL W LTF
Sbjct: 108 YALSGSVWKKRTLTWRVRSFPQS------SQLS---QETVRVLMSYALMAWGMESGLTFH 158
Query: 72 ETSIHS----DI------KFISSNNGYVCTPRYDSRYF--------MEINFDKADVWRYG 113
E DI F + + + F + +FD + W +G
Sbjct: 159 EVDSPQGQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHFDDEETWTFG 218
Query: 114 I--GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G+GT L A+HE GHALGL H + N S+M F
Sbjct: 219 SKDGEGTDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQGPV 259
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D +Q++YG + +
Sbjct: 260 GDPDKYRLSQ----DDRDGLQQLYGKAPQTPYD 288
>gi|308480250|ref|XP_003102332.1| hypothetical protein CRE_04892 [Caenorhabditis remanei]
gi|308261998|gb|EFP05951.1| hypothetical protein CRE_04892 [Caenorhabditis remanei]
Length = 472
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 37/183 (20%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEET-SIHSD 78
+ W + YK L+ + A A +W+K F ET + + D
Sbjct: 116 ELWIKKSLTYKIVNTPKT--------LSQAQIKSAAHEAFEQWTKASGFKFVETTAQNPD 167
Query: 79 IKFISSNNGY-----VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + + ++ ++ ++ G L H LHEIGH LG
Sbjct: 168 VTITFYDVPQSNLRIAGSASKPLNSHIILDKNQEWAYKSQAPMGISLYHTLLHEIGHILG 227
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H Y G S+M P + FG T D +A+++
Sbjct: 228 LPHTF-YRG------------------SIM---HPIFKPVLLPFGTVDTVPNVDRLAIRR 265
Query: 194 IYG 196
IYG
Sbjct: 266 IYG 268
>gi|157130901|ref|XP_001662054.1| matrix metalloproteinase [Aedes aegypti]
gi|108881896|gb|EAT46121.1| matrix metalloproteinase [Aedes aegypti]
Length = 492
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 33/219 (15%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISS--- 84
++ +VLT +F + Q + + A EWSKV +L F E + +DI+
Sbjct: 146 KWSKNVLTYTIENFPRGKRTAPIQAMLKKAFNEWSKVTNLDFVEVEDVDADIEINFGGRL 205
Query: 85 ----------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
++ + +I+F + A+HEIGH+LGL
Sbjct: 206 HKMRDSRCTFDDANTLAHAFFPEV-GDIHFHNRYFFNDEDVTLEDFLDTAMHEIGHSLGL 264
Query: 135 M---------HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HP N +D +N + V + S +
Sbjct: 265 EHSRSKASLMHPTESNRFNEPQPIDV--KNIQQMYGV------RRGGRSMSNEAPKLCSL 316
Query: 186 SDI-VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
I A+Q+ G GN Y + ++ I + +
Sbjct: 317 EKIDAAIQESDGNLYVFSGNFYYNVNEKRPVGRLISSKW 355
>gi|5616492|gb|AAD45804.1|AF162688_1 matrix metalloproteinase [Hydra vulgaris]
Length = 484
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 84/232 (36%), Gaps = 28/232 (12%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR-WALGEWSKVVDLTFEETSIH- 76
R++ ++ +K + LT L+ + L E A W V +L F + I+
Sbjct: 99 RNRRYTLQGTTWKKNELTWKLLNNNNDGLTRGEIETTLHKAFSMWEAVTNLKFRQLQINE 158
Query: 77 ---SDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
+DI+ + P + +++FD A+ + +G
Sbjct: 159 NKKADIEIKFAQGYHDDPYSFDGFGGTLAHAFYPHTNEGLSGDVHFDDAEKFTIESPEGR 218
Query: 119 ILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYE---NDSFLTSVMSYFMPQDSMMD 174
L A+HEIGH++GL H +P Y V + + +D + + S + + S+M
Sbjct: 219 SLLWVAVHEIGHSIGLEHSNVKEALMFPWYRVQDVRDIQLSDDDVLGIQSIYGSKKSIML 278
Query: 175 ASFGYCATPMVSDIVA----VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
S M + + K G + YKI K + T+
Sbjct: 279 PSTVTPTKKMKNSFQMKAVILDKSTGVTYAFNDDEFYKINNDLKKTEGPFTV 330
>gi|297690075|ref|XP_002822452.1| PREDICTED: collagenase 3-like isoform 1 [Pongo abelii]
Length = 471
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHNGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|221235629|ref|YP_002518066.1| iron-regulated protein FrpC [Caulobacter crescentus NA1000]
gi|220964802|gb|ACL96158.1| iron-regulated protein frpC [Caulobacter crescentus NA1000]
Length = 657
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 61/216 (28%), Gaps = 42/216 (19%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G+D LD Y D + + T IE++ GS+ ND +IG
Sbjct: 69 GNDTLDGGAGSDWAAYEDATAGVKVDLNLSGAQNTGGGGTDRLTSIENLYGSAFNDTLIG 128
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFY---------------------------YAPSYL 315
N+ +N+ +G D G G DT + A
Sbjct: 129 NAGDNMITGGAGADSITGGKGDDTLWGSAGNDTLDGGDGDDWMVGGAGDDVIKGGAGGDW 188
Query: 316 YKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ V D +D LS VE L + + + A
Sbjct: 189 SSYEDATAGVTVDLTKTTAQDTIGAGKDTLSGVENLWGSKFADVLTGDAGSNYIWGDAGD 248
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ L G D F EG FD+ Y
Sbjct: 249 DKLYGGAGDDFFAGGAGVNVIDGGEG----FDTIDY 280
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+++G GNDV+I N+ +N +GNDV DG G D Y + + A +
Sbjct: 426 IENLIGGHGNDVLIANADDNRIEGLTGNDVIDGGEGFDFATYRSAPGGVWV-DLTKAGVA 484
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D D L +E LR + + + LE + LI G+D+
Sbjct: 485 QDTRSAGIDTLISIEGLRGSVYADVLIGNAGANALEGEYDDDLLIGGGGRDLLTGGASAD 544
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
F + G + D+ D+ F +
Sbjct: 545 TFKFAVGDSVALDNT---SGNLDVITDFEA 571
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 8/145 (5%)
Query: 242 YIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+DLN + G ++ I +++ G +G+D + G+ N+V G+D G
Sbjct: 7 VMDLNGTQGADTLIGGAEDDVIYGFGGNDTLRGGAGDDAIAGHEGNDVLQGGDGDDYMLG 66
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDS 353
G DT A S + V + D L+ +E L +
Sbjct: 67 GPGNDTLDGGAGSDWAAYEDATAGVKVDLNLSGAQNTGGGGTDRLTSIENLYGSAFNDTL 126
Query: 354 VNVKQRSILEYTASYEDLIQVIGQD 378
+ +++ A + + G D
Sbjct: 127 IGNAGDNMITGGAGADSITGGKGDD 151
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 22/178 (12%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH----TVIES------------ 270
GDD++ G +Y D + TI + +E+
Sbjct: 176 GDDVIKGGAGGDWSSYEDATAGVTVDLTKTTAQDTIGAGKDTLSGVENLWGSKFADVLTG 235
Query: 271 ------VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ G +G+D + G + ++ F +G +V DG G DT Y + ++ N
Sbjct: 236 DAGSNYIWGDAGDDKLYGGAGDDFFAGGAGVNVIDGGEGFDTIDYGMSAVGVEVDLSRNI 295
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D LS +E + + + + L A + L G DV E
Sbjct: 296 ATSRFGDTSISDTLSSIELVTGSIYADFIIGNMAENYLYGDAGNDVLRAEGGGDVLEG 353
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K+YG G++ + + I G D +D + V +DL
Sbjct: 246 AGDDKLYG----GAGDDFF------AGGAGVNVIDGGEGFDTIDY-GMSAVGVEVDL--- 291
Query: 249 SWSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S + + +I+ + IE V GS D +IGN A N + +GNDV G D
Sbjct: 292 SRNIATSRFGDTSISDTLSSIELVTGSIYADFIIGNMAENYLYGDAGNDVLRAEGGGDVL 351
Query: 308 FYYAPSY-----LYKIYRFENAIIVYDANEH-----KQDFLSDVERLRFADQCIDSVNVK 357
L I + D + ++ +AD +D V
Sbjct: 352 EGGEGDDFLIGSLSDILIGGGGDDQLSVSGGSNYVDGGDGVDALQTFTYADVKVDLRIVI 411
Query: 358 QRSILEYT 365
+ I
Sbjct: 412 AQEIAPGF 419
>gi|332222943|ref|XP_003260629.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-14-like
[Nomascus leucogenys]
Length = 582
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIG--KGT 118
H D G++ + + +FD A+ W G G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVGNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|12060394|dbj|BAB20584.1| membrane-type 6 matrix metalloproteinase [Homo sapiens]
Length = 562
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 68/213 (31%), Gaps = 56/213 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFE 71
+ L W + ++ ++L+ QE R +AL W LTF
Sbjct: 108 YALSGSVWKKRTLTWRVRSFPQS------SQLS---QETVRVLMSYALMAWGMESGLTFH 158
Query: 72 ETSIHS----DI------KFISSNNGYVCTPRYDSRYF--------MEINFDKADVWRYG 113
E DI F + + + F + +FD + W +G
Sbjct: 159 EVDSPQGQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHFDDEETWTFG 218
Query: 114 I--GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G+GT L A+HE GHALGL H + N S+M F
Sbjct: 219 SKDGEGTDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQGPV 259
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D +Q++YG + +
Sbjct: 260 GDPDKYRLSQ----DDRDGLQQLYGKAPQTPYD 288
>gi|226943500|ref|YP_002798573.1| Alginate lyase [Azotobacter vinelandii DJ]
gi|226718427|gb|ACO77598.1| Alginate lyase [Azotobacter vinelandii DJ]
Length = 417
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 55/154 (35%), Gaps = 1/154 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD + + I N + G + N + ++ + + G++G+D + G + +
Sbjct: 244 GDDKANSLTGTKENDVIRANGGDDK-VYGRDGNDELYGNSGNDKLYGNAGDDKLYGTAGD 302
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V G D+ +G SG D F + + + V D + +DF + +
Sbjct: 303 DVLQGGPGKDLLEGGSGADKFVFTSLEDAGDTITDFRSGDVIDISSLVEDFSRGGDDMSL 362
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + + + + D G
Sbjct: 363 KDLKSNGFINFKETTDNTYEVHVDADGAKGSAAD 396
>gi|124026810|ref|YP_001015925.1| hypothetical protein NATL1_21051 [Prochlorococcus marinus str.
NATL1A]
gi|123961878|gb|ABM76661.1| Hypothetical protein NATL1_21051 [Prochlorococcus marinus str.
NATL1A]
Length = 2178
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 52/159 (32%), Gaps = 9/159 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
TI D+ D +D + + G + + NT +++ G T+
Sbjct: 1494 GTVAVTASGSGNLTIDDANIDGTSASLSVDASAMSGTVSAVATNTSVATTLTGGSGADTL 1553
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+V +++ G +G D + N+ ++ GND G +G + A +
Sbjct: 1554 TGGSVADTITGGAGGDTITTNAGDDTVAGGGGNDTITGGAGDNVITGGAGNDSITAGAGF 1613
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ I + D + + +D +
Sbjct: 1614 DNID----SGAGDDTIVFAANMSLSDTVAGGDGNDTITA 1648
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 7/122 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLT------LIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ T +D+ L+D + + G + ++ S+
Sbjct: 1049 DFSLTVTGGTATVTDFDAETFSLIDASASTGKLTVTGTSSDGNITVLGGSAGDDITLATA 1108
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA V S+ G G D ++G++ +GND DG++G D+ A + +
Sbjct: 1109 IATDKV-HSISGGGGADTILGSAGAETIIGGAGNDSLDGAAGNDSISGGAGNDTFSFAAT 1167
Query: 322 EN 323
Sbjct: 1168 GQ 1169
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ S +I D+ ++ +T+ G Y + G + +I +
Sbjct: 619 TIDASASTGAVSIGDTANGSVVPMTITAGSGGYTGSGGTKADTFTGGAGDDSIDGDAGDD 678
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
S+VG++G D + G + N+V +GND SG D A + + +
Sbjct: 679 SLVGAAGADDLDGGAGNDVISGGAGNDTITAGSGNDNLDGGADADTFTLSTN 730
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 45/157 (28%), Gaps = 24/157 (15%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ V S T+ D + L SI G TI
Sbjct: 1077 STGKLTVTGTSSDGNITVLGGSAGDDITLATAIATDKV--------HSISGGGGADTILG 1128
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--------------FDGSSGLDTFFYY 310
E+++G +GND + G + N+ +GND DG G D
Sbjct: 1129 SAGAETIIGGAGNDSLDGAAGNDSISGGAGNDTFSFAATGQLNNGDTIDGGDGTDNLDVT 1188
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
L ++ + D + L F
Sbjct: 1189 TAVDLDSSSTASTSVTLTSIET--VDLTLGADNLSFD 1223
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 60/202 (29%), Gaps = 18/202 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTESWS-- 251
+ G+ + V ++++ + + L+ L++ G I + + +
Sbjct: 559 TAKGDTTTAVTVNEEETITFASDTAASVITTLNAADATKLSVTGSADATISTISGNDNLA 618
Query: 252 --SIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA-NNVFFESSGNDVFDGSSGLD 305
++I A +V+ + + + F +G+D DG +G D
Sbjct: 619 TIDASASTGAVSIGDTANGSVVPMTITAGSGGYTGSGGTKADTFTGGAGDDSIDGDAGDD 678
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSIL 362
+ A + N +I A S + L AD S N +
Sbjct: 679 SLVGAAGADDLD-GGAGNDVISGGAGNDTITAGSGNDNLDGGADADTFTLSTNYTTDDTI 737
Query: 363 EYTASYEDLIQVIGQDVFESMK 384
A + + I
Sbjct: 738 VGGAGEDSVSMTIAGGTTTYTA 759
>gi|115899460|ref|XP_780356.2| PREDICTED: similar to membrane-type matrix metalloproteinase 1
alpha [Strongylocentrotus purpuratus]
gi|115949328|ref|XP_001190547.1| PREDICTED: similar to membrane-type matrix metalloproteinase 1
alpha [Strongylocentrotus purpuratus]
Length = 489
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 60/201 (29%), Gaps = 42/201 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
R + +S+ ++ +T L+F + A WS V LTF +
Sbjct: 78 TRFRRYSDSGDKWDHQEITYRILNFTPDLTEAEVVDSFERAFKVWSDVTPLTFRRVFDVP 137
Query: 77 SDIKFISSNN-----------GYVCTPRY--DSRYFMEINFDKADVWR--YGIGKGTILS 121
DI S G Y + +FD ++++ T L
Sbjct: 138 GDIHIQFSEYDHGDGVAFDGLGGTLAHAYFPGGSIGGDAHFDDSEIFSVFLSDDDKTDLF 197
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + + V D S GY
Sbjct: 198 MVAAHEFGHSLGLGHSSDIHALMAPFYVGYD--------------------PGFSLGY-- 235
Query: 182 TPMVSDIVAVQKIYGAPKGSL 202
D+ +Q IYG
Sbjct: 236 ----DDLHGIQSIYGINSSPR 252
>gi|32566659|ref|NP_506678.2| hypothetical protein W09D12.1 [Caenorhabditis elegans]
gi|27753124|emb|CAB01669.2| C. elegans protein W09D12.1, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 472
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 37/183 (20%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIHS-D 78
+ W+ + YK L+ + A A +W++ F ET+ + D
Sbjct: 116 ELWTKKSLTYKVVNTPNT--------LSQAQIRSAAHEAFEQWTRASGFKFVETTGATPD 167
Query: 79 IKFISSNNGY-----VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
I + + + ++ ++ ++ G L H LHEIGH LG
Sbjct: 168 ITITFYDVPQSNLRIAGSASKPVNSHIILDKNQEWAYKSQAPMGISLYHTLLHEIGHILG 227
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H Y G S+M P + G T D +A++K
Sbjct: 228 LPHTF-YRG------------------SIM---HPIFKPVLLPHGTVDTVPNVDRLAIRK 265
Query: 194 IYG 196
IYG
Sbjct: 266 IYG 268
>gi|221121804|ref|XP_002166835.1| PREDICTED: similar to matrix metalloproteinase, partial [Hydra
magnipapillata]
Length = 475
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 72/207 (34%), Gaps = 48/207 (23%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFE--ETSI 75
R + ++ ++K LT L+ + L+ + ++ + A W V +L F E S
Sbjct: 113 RTRRYTPQGSKWKKSDLTWKLLNDNNDNLSRSQVEDTLQQAFARWEAVTNLRFHKLEKSS 172
Query: 76 --HSDI---------------KFISSNN---GYVCTPRYDSRYFMEINFDKADVWRYGIG 115
++DI + P + +++F + G
Sbjct: 173 DEYADIDVSFVYRFQKQERDPTLFYGTGIVLAHGYYPNSNKGISGDLHFYDETEFTLGTT 232
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
KG L A+HEIGH +GL H S S+M + M
Sbjct: 233 KGINLLWVAVHEIGHCIGLEHS-------------------SVKNSIM--YPQYKGYMGE 271
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSL 202
+F T DI+ +Q IYG+ +
Sbjct: 272 NF----TLSQDDILGIQSIYGSKTQTS 294
>gi|168699621|ref|ZP_02731898.1| Animal haem peroxidase [Gemmata obscuriglobus UQM 2246]
Length = 357
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 55/167 (32%), Gaps = 5/167 (2%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLN--TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ G +++ GG ++ + + G + +A +T + ++G +GND +
Sbjct: 107 FAPGSTITVEVNARGGNDTVVNATRFGGTLNGGDGNDTLTVVATNTAVNQLLGGAGNDTL 166
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS- 339
G S N + GND+ G +G D + ++ + D L
Sbjct: 167 TGGSGNELLVGGLGNDLISGGNGNDDLWGDDRVGSNGVFVSSGSGTDILLGNMGNDTLRG 226
Query: 340 -DVERLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQDVFESMK 384
+ + D + Q + + + L G D
Sbjct: 227 GGGDDQLWGDHAQKQMVNGQLQWVSLDSGGNDQLFGEAGNDTLVGGW 273
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 5/111 (4%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ GGDD L ++ G ++ L++ + G N T+ +++
Sbjct: 220 GNDTLRGGGGDDQLWGDHAQKQMVNGQLQWVSLDSGGNDQLFGEAGNDTLVGGWGNDTLS 279
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G +GND + G N+ D G G D+ A + ++ + +
Sbjct: 280 GGAGNDWLFGGKGNDALSGGDDRDYLFGGDGSDSLDGGAMTDYIRVGGYND 330
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-----LYKIYRFENAIIVY 328
S GND + G + N+ GND G +G D F + + Y F
Sbjct: 254 SGGNDQLFGEAGNDTLVGGWGNDTLSGGAGNDWLFGGKGNDALSGGDDRDYLFGGDGSDS 313
Query: 329 DANEHKQDFLS 339
D++
Sbjct: 314 LDGGAMTDYIR 324
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 14/91 (15%)
Query: 224 DSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
DSGG+D L + TL+GG N ++ G N + +++ G D
Sbjct: 253 DSGGNDQLFGEAGNDTLVGGWGND---------TLSGGAGNDWLFGGKGNDALSGGDDRD 303
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G ++ + D D F+
Sbjct: 304 YLFGGDGSDSLDGGAMTDYIRVGGYNDPFWG 334
>gi|160877666|pdb|2JSD|A Chain A, Solution Structure Of Mmp20 Complexed With Nngh
Length = 160
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 52/147 (35%), Gaps = 23/147 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T S ++ + AL WS V L+F S +DI
Sbjct: 5 WKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAWSSAVPLSFVRINSGEADIMI 57
Query: 82 ISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
N + + +D + +FD A+ W G G L A HE
Sbjct: 58 SFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN-GFNLFTVAAHEF 116
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYE 154
GHALGL H + YP Y N Y
Sbjct: 117 GHALGLAHSTDPSALMYPTYKYKNPYG 143
>gi|195431910|ref|XP_002063971.1| GK15621 [Drosophila willistoni]
gi|194160056|gb|EDW74957.1| GK15621 [Drosophila willistoni]
Length = 632
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 73/217 (33%), Gaps = 56/217 (25%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ--EVARWALGEWSK 64
++ R ++L+ W + + T ++ Q ++ AL W
Sbjct: 75 SFSLHRSRRYVLQGPKWDKTDLTWSLVNQT----------MSKAGQIRQMVTRALRVWEN 124
Query: 65 VVDLTFEET-SIHSDIKFISSNNGYVCTPRYDS-------------RYFMEINFDKADVW 110
LTF E S +DI+ + + + ++D + +FD + W
Sbjct: 125 NSKLTFREVYSDQADIQVLFARRDHGDGYKFDGPGQVLAHAFYPGVGRGGDAHFDAEETW 184
Query: 111 RYGI----GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
+ +GT + ALHE+GH+LGL H N VM +
Sbjct: 185 EFDSTTDDSRGTNFLNVALHELGHSLGLGHSSDSNA-------------------VMFPW 225
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ + D +Q++YGA + G
Sbjct: 226 YQNNEVDGK-------LPDDDRNGIQELYGAKDKTWG 255
>gi|12643423|sp|P53690|MMP14_MOUSE RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=MMP-X1; AltName: Full=MT-MMP; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
Length = 582
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 51/173 (29%), Gaps = 49/173 (28%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSA------ 255
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+MS F MD D +Q++YG+ GS
Sbjct: 256 -------------IMSPFYQ---WMDTENFVLP---DDDRRGIQQLYGSKSGS 289
>gi|329848368|ref|ZP_08263396.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843431|gb|EGF93000.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 453
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 3/131 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + + + G + +DV+ G + ++ + SGND G +G D +
Sbjct: 44 IYGRGGNDVLDGGDGNDLIDGGNDHDVLYGGAGHDSLYGGSGNDNLIGGAGDDQLYGGQG 103
Query: 313 SYLYKIYRFENAIIVYDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + D L+ +E + +D + L +
Sbjct: 104 QDWATYTGGAAIVANLNTGLVTGQGSDTLNGIENIMGSDFADILQGNASANKLHGGGGDD 163
Query: 370 DLIQVIGQDVF 380
+ G D
Sbjct: 164 RFVVSYGYDEL 174
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 9/128 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ G D+LD G V+ + L ++ Y N T E ++G + ND++
Sbjct: 174 LVGGTGTDVLDFINAGPVQ--VSLLQGTY-----YMNNNNAGTATGFEDILGGNSNDLLR 226
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDANEHKQDFLS 339
G++ N G D DG G D ++ ++ N DF
Sbjct: 227 GDNGANRIDGRGGQDTLDGQGGADVLTASGGHDSLTGGAGNDSFVIAASSGNIVISDFTQ 286
Query: 340 DVERLRFA 347
+ + +
Sbjct: 287 GSDVIDLS 294
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 19/198 (9%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+YG +++Y +Y G D T GG +LNT +
Sbjct: 71 LYGGAGH---DSLYGGSGNDNLIGGAGDDQLYGGQGQDW--ATYTGGAAIVANLNTGLVT 125
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N IE+++GS D++ GN++ N G+D F S G D
Sbjct: 126 GQGSDTLN-------GIENIMGSDFADILQGNASANKLHGGGGDDRFVVSYGYDELVGGT 178
Query: 312 PSYLYKIYRFENAII-----VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + Y N + + E + + + ++
Sbjct: 179 GTDVLDFINAGPVQVSLLQGTYYMNNNNAGTATGFEDILGGNSNDLLRGDNGANRIDGRG 238
Query: 367 SYEDLIQVIGQDVFESMK 384
+ L G DV +
Sbjct: 239 GQDTLDGQGGADVLTASG 256
>gi|259417930|ref|ZP_05741849.1| bifunctional hemolysin/adenylate cyclase [Silicibacter sp.
TrichCH4B]
gi|259346836|gb|EEW58650.1| bifunctional hemolysin/adenylate cyclase [Silicibacter sp.
TrichCH4B]
Length = 1456
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Query: 199 KGSLGNNIYKIEVQQ-KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+G+ GN++ + D + ++ G+D + +++ G N ++ ++ E
Sbjct: 608 EGTSGNDLIDVNYTGDPDGDMVDADDNAAGND--NDSIVAGDGNDTIMSGSGVDTVDAGE 665
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + + + + G +GND ++G S + GND DG D + A L +
Sbjct: 666 GDDVVDGGSGNDVISGGAGNDSLMGGSGYDTIHGGDGNDTLDGGGNNDFLYGDAGDDLIR 725
Query: 318 IYRFENAIIVYDANE 332
++ D N+
Sbjct: 726 TGSGNGSVFGGDGND 740
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 69/222 (31%), Gaps = 34/222 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G G + + + TI G+D L D ++ GG N +
Sbjct: 227 GGNDSLTGGS---GDDSIRGGDGADTILGGAGNDTLAANNGDDSVDGGAGNDSLIGGSGA 283
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GS 301
+++ G + + TI+ +S+ G + ND + GN N+ F +G+D G
Sbjct: 284 NTLAGGDGDDTISGGNAGDSIDGGADNDDISGNDGNDTIFGGTGSDTIYGDAGNDSLEGG 343
Query: 302 SGLDTFFYYAPSYLYK-----------------IYRFENAIIVYDANEHKQDFLSDVERL 344
G D+ + A S + N + + D +RL
Sbjct: 344 DGNDSLYGGAGSDTLRGGDGDDYLGGGGDGDSLFGDAGNDTLYSGSGLATLDGGDGNDRL 403
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + + ++ G D F+ F
Sbjct: 404 YVSSGNTTLKGGTGNDSIHGGTGDDSMMGESGDDSFDLADDF 445
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 12/153 (7%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DD +D + L S+ G + +I ++++G +GND + N+ ++
Sbjct: 209 DDTVDASADSSGVVLDGL--GGNDSLTGGSGDDSIRGGDGADTILGGAGNDTLAANNGDD 266
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+GND G SG +T ++I D +D + +
Sbjct: 267 SVDGGAGNDSLIGGSGANTLAGGDGDDTISGGNAGDSI----------DGGADNDDISGN 316
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + A + L G D
Sbjct: 317 DGNDTIFGGTGSDTIYGDAGNDSLEGGDGNDSL 349
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 8/193 (4%)
Query: 200 GSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWS- 251
G GN++ TI+ G+D LD G + T S +
Sbjct: 672 GGSGNDVISGGAGNDSLMGGSGYDTIHGGDGNDTLDGGGNNDFLYGDAGDDLIRTGSGNG 731
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + N T+ + +++ G +GND + G + + G+D G G D+ + A
Sbjct: 732 SVFGGDGNDTLEGNDNGQAMSGGTGNDFIDGGGGVDHLYGDDGDDTIHGGDGGDSLYGGA 791
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S + + II + +++ + D D I + + E +
Sbjct: 792 GSDVIVGGEGADRIIGLEGDDNIEAGAGDYIDAGHGDDVITIDSSLSSNGTITVIGGEYV 851
Query: 372 IQVIGQDVFESMK 384
+ +
Sbjct: 852 EEDVNDATNNPNG 864
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 17/170 (10%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ + IY ++Y G D L S+ G
Sbjct: 325 GTGSDTIYGDAGNDSLEGGDGNDSLYGGAGSDTLRGGDGDDYLG----GGGDGDSLFGDA 380
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N T+ + + ++ G GND + +S N +GND G +G D+ + +
Sbjct: 381 GNDTLYSGSGLATLDGGDGNDRLYVSSGNTTLKGGTGNDSIHGGTGDDSMMGESGDDSFD 440
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A++ D + E + +D N+ ++ T++
Sbjct: 441 L-----------ADDFGNDTIIGGETGETSGDTLDLRNITSDLTIDLTSA 479
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 12/166 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GGDDL+D + G D+ S + + + N +A +++ G GND +
Sbjct: 57 TGGDDLIDGSYTGDPDG--DMVDSSANVVEAGDGNDIVATGQGADTIYGGDGNDAIYSGG 114
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--------KIYRFENAIIVYDANEHKQD 336
+ G+D G DT + A S + IY E++
Sbjct: 115 DGDYVEGGGGDDTIYQGGGNDTVYGGAGSDTFEIPAQTGDSIYGGEDSDDSDVDIIDGSS 174
Query: 337 FLSDVERLRFADQCIDSVNVKQRSIL--EYTASYEDLIQVIGQDVF 380
+ V L D+ V + ++D +
Sbjct: 175 ASAPVNVLYTGDEAGSYVGGGTFEEIEGHTLTQHDDTVDASADSSG 220
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 3/118 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ ++++G GND + G N+ F +GND+ G SG D F
Sbjct: 1069 TLYGDSGNDSLLGQGDDDALIGGDGNDTLSGGDGNDALFGGAGNDLMIGGSGDDQFSAGT 1128
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + N+ + D + DF V+ +Q V I
Sbjct: 1129 GNDTIYDFGTGNSGSINDGDNTNNDF---VDLTHIYNQTTYDQAVADGLIDPTVIRNP 1183
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 27/196 (13%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS 252
A + GN+ I D T++ G D +D G L+ +
Sbjct: 950 ASDNAAGNDDDSIRAGDGDD----TVWAGAGSDTVDGGSGKDSILGQDGDDTLSGGAGQD 1005
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------------- 295
+ G + ++ + + G GND + G++ N+ + SGN
Sbjct: 1006 TLDGGSGDDVLSGGDDADYMSGGIGNDTLSGDAGNDTLYGQSGNDSLSGGDDDDRLDGGV 1065
Query: 296 --DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
D G SG D+ + + D N+ + + + S
Sbjct: 1066 GEDTLYGDSGNDSLLGQGDDDALIGGDGNDTLSGGDGNDALFGGAGNDLMIGGSGDDQFS 1125
Query: 354 VNVKQRSILEYTASYE 369
+I ++
Sbjct: 1126 AGTGNDTIYDFGTGNS 1141
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 24/153 (15%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES------------------ 249
+S D+G ++ + I V + D+ +
Sbjct: 888 TWNGVTSESGTATYENDAGETVTINFSQIETVYSDNDIVEGTGGNDMINAAYTGDPDGDM 947
Query: 250 --WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S + +I ++V +G+D V G S + G+D G +G DT
Sbjct: 948 VDASDNAAGNDDDSIRAGDGDDTVWAGAGSDTVDGGSGKDSILGQDGDDTLSGGAGQDTL 1007
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + Y + D LS
Sbjct: 1008 DGGSGDDVLS----GGDDADYMSGGIGNDTLSG 1036
>gi|258544110|ref|ZP_05704344.1| iron-regulated protein FrpA [Cardiobacterium hominis ATCC 15826]
gi|258520618|gb|EEV89477.1| iron-regulated protein FrpA [Cardiobacterium hominis ATCC 15826]
Length = 545
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 32/206 (15%)
Query: 199 KGSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS 252
K + G++ IY + I GG+D++ D L G N + +
Sbjct: 281 KTTEGDDHIYGSKDND-------IINGKGGNDVISGEEGDDELYGEDGNDNLIGSVGNDK 333
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVI---------GNSANNVFFESSGNDVFDGSSG 303
+ G ++ + + G +GND +I GN ++ + +GND+ G SG
Sbjct: 334 LSGGAGEDSLNGGDGRDHLSGGAGNDELIDGEDDDQLHGNEGDDKLYGGTGNDLLIGDSG 393
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D A + +Y+ R ++ + + L + + F+D ++++
Sbjct: 394 NDVLSGSAGNDIYRFARGFGHDVINNYDGG----LGRHDSIDFSDMNRSDFDIRREGNNL 449
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF 389
S + G++ HF+
Sbjct: 450 VLHSKD------GKNQITVTNHFFNG 469
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 14/153 (9%)
Query: 258 KNMTIAQHTVIESV--VGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDT 306
+ +I IE + G+D + G+ N++ GNDV G G D
Sbjct: 265 ADGSILTADEIERELQKTTEGDDHIYGSKDNDIINGKGGNDVISGEEGDDELYGEDGNDN 324
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ E+++ D +H + E + D N + T
Sbjct: 325 LIGSVGNDKLSGGAGEDSLNGGDGRDHLSGGAGNDELIDGEDDDQLHGNEGDDKLYGGT- 383
Query: 367 SYEDLIQVIGQDVFESMK--HFYEFGLSEGRDI 397
+ LI G DV Y F G D+
Sbjct: 384 GNDLLIGDSGNDVLSGSAGNDIYRFARGFGHDV 416
>gi|153010110|ref|YP_001371324.1| hemolysin-type calcium-binding region [Ochrobactrum anthropi ATCC
49188]
gi|151561998|gb|ABS15495.1| Hemolysin-type calcium-binding region [Ochrobactrum anthropi ATCC
49188]
Length = 518
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + ID +++I N + T + + G +G+D ++G ++ SG+
Sbjct: 133 TGAGNDTIDATGFQFANIHAGAGNDYVRGGTGNDQITGGAGHDNLLGGDGDDQIKGGSGD 192
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
DV DG +G DT + R + ++ + N+ + A I
Sbjct: 193 DVIDGGNGNDTLSGNDGNDKLSGGRGNDTLMGDEGNDTLNGGDGNDRLYGGAGTDILLGG 252
Query: 356 VKQRSILEYTASYEDLIQVIGQD 378
+ + L G D
Sbjct: 253 AGDDYLQNTGTDGDTLFGGDGND 275
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 49/162 (30%), Gaps = 8/162 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D G + ID + ++ G + N ++ ++++G GND + G N
Sbjct: 179 GGDGDDQIKGGSGDDVIDGGNGND-TLSGNDGNDKLSGGRGNDTLMGDEGNDTLNGGDGN 237
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-------S 339
+ + +G D+ G +G D N + + +
Sbjct: 238 DRLYGGAGTDILLGGAGDDYLQNTGTDGDTLFGGDGNDYFTAGSIDSGYSGYWFEMHGGA 297
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ I +++D+ D +
Sbjct: 298 GNDTFSIYSDGGLGTIDGGDGIDTLAVTFDDVAAGFKFDAAD 339
Score = 37.8 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 23/70 (32%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG++ D + N+ + +GND+ DG G D A +
Sbjct: 4 IVGTNDADTIFDTEENDRIWALAGNDIVDGGLGSDIIDGGAGDDVLTTTWRNVPEFDELN 63
Query: 331 NEHKQDFLSD 340
D L
Sbjct: 64 GASGNDRLIF 73
>gi|148679222|gb|EDL11169.1| matrix metallopeptidase 15, isoform CRA_a [Mus musculus]
Length = 501
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 56/173 (32%), Gaps = 49/173 (28%)
Query: 52 QEVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVC 90
E R A W +V L F+E S H D G++
Sbjct: 1 MEAVRRAFQVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLA 60
Query: 91 TPRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ + +FD + W + G L A+HE+GHALGL H + +
Sbjct: 61 HAYFPGPGLGGDTHFDADEPWTFSSTDLHGISLFLVAVHELGHALGLEHSSNPSA----- 115
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+M+ F + D+ +Q++YG+P G
Sbjct: 116 --------------IMAPFYQWMDTDNFQ------LPEDDLRGIQQLYGSPDG 148
>gi|302875677|ref|YP_003844310.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578534|gb|ADL52546.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 2125
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E + I + + G G+D + G ++ GND+ G +G D
Sbjct: 554 IHGMEGDNIIYGSDQDDIIFGFGGDDTIYGYGGDDQLIGGDGNDILYGGTGSDLLAGDEG 613
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
S Y + + + + + +D ++ ++ D
Sbjct: 614 SDTYIFKKGDGMDFISEFDSSGKD----IDTVKITDG 646
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 55/180 (30%), Gaps = 33/180 (18%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-------WSS 252
G+ GN++Y E + G D + +N + + S+
Sbjct: 1668 GNNGNDVYLFESNSGVKIIEDSDETVGNIDTIRFGKGIAKENILFGRAGNNLEIVIKGSN 1727
Query: 253 IGGYEKNMTIA-QHTVIESVV------------------------GSSGNDVVIGNSANN 287
KN IA I + + G+ GND + G +
Sbjct: 1728 DKVIIKNYFIADYDVNISNTIEKIEFADGAIWDATTIASQVIYILGTDGNDSLNGTDKAD 1787
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRF 346
+F GND F G G D + + S + I + D L D+E +R
Sbjct: 1788 IFNGQLGNDYFSGGKGNDVYLFELNSGIKTIEDNDGTDGNIDTIRFGSKILPEDIEFVRI 1847
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + GS+G+D++ S N++ GND GS+G DT+ + + I F+ +
Sbjct: 286 VDIITGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDFDTTVGN 345
Query: 328 YDANEHKQDFLSDVERLRF 346
D + L E + F
Sbjct: 346 MDTIKFGDGILP--ENILF 362
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 57/180 (31%), Gaps = 34/180 (18%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--------SWS 251
G+ GN+ Y T G D + +N I S
Sbjct: 1536 GNKGNDTYIFNKGTGIKIIEDTDVTVGNIDTIKFGEGITQENIIFGRAGNNLEIVIKGTS 1595
Query: 252 S--------IGGYEKNMTIA-------QHTVIESVV---------GSSGNDVVIGNSANN 287
+ Y+ N++ A V +S + G+ GND + G +
Sbjct: 1596 DKVIVKNYFVVDYDINISSAIEKIEFEGGVVWDSTIIASQVIYILGTDGNDSLSGTDKAD 1655
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+F GND F G++G D + + + S + I + + D + E + F
Sbjct: 1656 IFNGYLGNDTFIGNNGNDVYLFESNSGVKIIEDSDETVGNIDTIRFGKGIAK--ENILFG 1713
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + V + + GNDV+I + + + GND+ DG G D
Sbjct: 1909 LSGSNGNDILTGSAVDDEIYSYGGNDVIIALDGADNIYSAEGNDILDGGIGTDNLNGAEG 1968
Query: 313 SYLYKI--YRFENAIIVYDANEHKQDFLSDVERLRFAD 348
S Y E+ I +D D + E + +D
Sbjct: 1969 SDTYIFKKGYGEDFIFEFDDTGKAVDTVKLGEGIVQSD 2006
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G D++ G++ +++ + SGND+ DG G D + Y + + + D +
Sbjct: 282 GTEGVDIITGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDFDT 341
Query: 333 HKQDFLSDVERLRFADQ 349
+ +++ ++F D
Sbjct: 342 ----TVGNMDTIKFGDG 354
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 56/174 (32%), Gaps = 34/174 (19%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--------------------TLIGGV 239
G+ GN+ Y G D + T+ G
Sbjct: 1140 GNKGNDTYIFNKGTGIKIIEDIDITVGNIDTIKFGEGILPGNIIFVRVDNNLEITIKGSA 1199
Query: 240 KNYI---------DLNTES----WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
I D+N + GG + TI VI +G++GND + G +
Sbjct: 1200 DKVIIKNYFDIDLDINITNKIEKIIFHGGVIWDETIIASQVI-YTIGTNGNDTLTGTVKD 1258
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
++F GND F G+ G DT+ + + + I + + D + L
Sbjct: 1259 DIFDGLLGNDTFIGNKGNDTYIFNLGTGIKIIEDIDITVGNIDTIRFGEGVLPG 1312
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG + + VI + G+ GND +IG + F +GND F G G D + +
Sbjct: 698 GGQIEVIVNGGGDVINVITGTDGNDTLIGTDKIDRFDGLTGNDTFIGDKGNDIYVINLNT 757
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ I D E D + E +
Sbjct: 758 GIKIIED-------IDITEGNIDTIQFGEGIS 782
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 32/173 (18%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-------WSS 252
G+ GN+ Y + G D + N I + ++ S+
Sbjct: 1272 GNKGNDTYIFNLGTGIKIIEDIDITVGNIDTIRFGEGVLPGNVIFVRVDNNLEIVIKGST 1331
Query: 253 IGGYEKN-MTIAQHTVIESVV------------------------GSSGNDVVIGNSANN 287
KN I I + + G+ +D + G ++
Sbjct: 1332 DKIIIKNYFVIDYDVNITNRIEKIEFFGGITWDIDVIAKQLIYTLGTDKDDTLTGTDKDD 1391
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+F GND+F G+ G DT+ + + + I + + D + + L
Sbjct: 1392 IFDGLLGNDIFIGNKGNDTYIFNKGTGIKIIEDIDITVGNIDTIKFGEGILPG 1444
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G+ GND + G +++ GND+ G G DT+ + + + I + I D
Sbjct: 848 IGTDGNDEIHGTGKDDIIDGHLGNDILIGGKGNDTYIFNLGTGIKIIEDIDVTIGNIDTI 907
Query: 332 EHKQ 335
+
Sbjct: 908 KFGT 911
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 27/172 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--------IGGVKNYIDLNTESWSSIG 254
GN+ Y + G D + V N +++ S
Sbjct: 879 GNDTYIFNLGTGIKIIEDIDVTIGNIDTIKFGTGIKPENIVFVRVDNNLEITIIGSSDKI 938
Query: 255 GYEKNMTIAQHTVIESVV------GSSGNDV---------VIGNSANNVFFESSGNDVFD 299
+ I + I +++ G D+ +IG+ ++ + G D+FD
Sbjct: 939 IIKNYFDIDFNVKITNIIERIEFVGGIVWDIDIIQSQIVHLIGSDNDDKLIGTIGVDIFD 998
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G G D F + Y I+ D + + +++ +RF + +
Sbjct: 999 GHLGKDIFVGGKGNDTYIFNLGTGIKIIEDIDI----TVGNIDTIRFGEGVL 1046
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 32/170 (18%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-------WSSIGG 255
GN+ Y + G D + N I + ++ S+
Sbjct: 1011 GNDTYIFNLGTGIKIIEDIDITVGNIDTIRFGEGVLPGNIIFVRVDNNLEIVIKGSTDKI 1070
Query: 256 YEKN-MTIAQHTVIESVV------------------------GSSGNDVVIGNSANNVFF 290
KN I I + + G+ +D + G +++F
Sbjct: 1071 IIKNYFVIDYDVNITNRIEKIEFFGGITWDIDVIAKQLIYTLGTDKDDTLTGTDKDDIFD 1130
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND+F G+ G DT+ + + + I + + D + + L
Sbjct: 1131 GLLGNDIFIGNKGNDTYIFNKGTGIKIIEDIDITVGNIDTIKFGEGILPG 1180
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 56/201 (27%), Gaps = 31/201 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-------WSSIGG 255
GN+IY + G D ++ + KN + SS
Sbjct: 453 GNDIYIYNLNTGIKTIKDNDITGGNVDTIEFGVGIDPKNIVFTRVGDNLEISIKESSGKV 512
Query: 256 YEKNMTIAQHTVIESVVGSSG---NDV--------------VIGNSANNVFFESSGNDVF 298
+N I IE + + G ND + G +N+ + S +D+
Sbjct: 513 IVENYYIGIENHIEIIKFADGTIWNDERINKQPVVIRGQGEIHGMEGDNIIYGSDQDDII 572
Query: 299 DGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDF--LSDVERLRFADQCI 351
G G DT + Y + A + D + + F +
Sbjct: 573 FGFGGDDTIYGYGGDDQLIGGDGNDILYGGTGSDLLAGDEGSDTYIFKKGDGMDFISEFD 632
Query: 352 DSVNVKQRSILEYTASYEDLI 372
S + +D++
Sbjct: 633 SSGKDIDTVKITDGILAKDVM 653
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 41/118 (34%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I + + ++ G D + N++ G D +G+ G DT+ +
Sbjct: 1918 LTGSAVDDEIYSYGGNDVIIALDGADNIYSAEGNDILDGGIGTDNLNGAEGSDTYIFKKG 1977
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
I+ F++ D + + + + + + + IL Y D
Sbjct: 1978 YGEDFIFEFDDTGKAVDTVKLGEGIVQSDLKFIKDGENLQISIGNTKDILTVVGYYSD 2035
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 38/182 (20%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---------- 249
G+ GN+ Y G D + N + ++ S
Sbjct: 1404 GNKGNDTYIFNKGTGIKIIEDIDITVGNIDTIKFGEGILPGNILFVHVGSNLEIIIKGSN 1463
Query: 250 ----WSSIGGYEKNMTIAQHTVIESV--------------------VGSSGNDVVIGNSA 285
+ + N+ I IE + +G+ +D + G
Sbjct: 1464 DKVIIKNYFDVDYNVNITNR--IEKIEFFGGITWDIDVIAKQLIYTLGTDKDDTLTGTDK 1521
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+++F GND+F G+ G DT+ + + + I + + D + + E +
Sbjct: 1522 DDIFDGLLGNDIFVGNKGNDTYIFNKGTGIKIIEDTDVTVGNIDTIKFGEGITQ--ENII 1579
Query: 346 FA 347
F
Sbjct: 1580 FG 1581
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLY--KIYRFENAIIVYDANEHKQDFLSDVERL 344
N ++GND F+G G D+ + + Y + ++ I D D ++ E +
Sbjct: 11 NRLTGTTGNDRFEGGKGNDSILGFTGNDEYLFNLGDGQDRITDMDKTNGNIDTITFGENI 70
Query: 345 RFAD 348
+D
Sbjct: 71 VGSD 74
Score = 44.7 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I V E + GS+G D + N++ G D+ G +G D + + I
Sbjct: 138 IVGTDVNEWIEGSTGKDDIEARGGNDIIDGRGGGDLSKGGTGSDIYIFNKGYGELIIEET 197
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
I D + + + + F + ++ +
Sbjct: 198 AETIGNIDKIRFGKGI--NPDDVVFNKEGLNLI 228
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G+S +D++ G ++F GND F G G D + Y + + I + D
Sbjct: 422 IGTSDDDILNGIDKVDIFDGLLGNDTFIGGKGNDIYIYNLNTGIKTIKDNDITGGNVDTI 481
Query: 332 EHKQ 335
E
Sbjct: 482 EFGV 485
>gi|221209553|ref|ZP_03582534.1| cable pili-associated 22 kDa adhesin protein [Burkholderia
multivorans CGD1]
gi|221170241|gb|EEE02707.1| cable pili-associated 22 kDa adhesin protein [Burkholderia
multivorans CGD1]
Length = 3082
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 10/152 (6%)
Query: 228 DDLLDLTLIGGVKNYIDLN----TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D L+ ++ N ++S S + G + T+ + + + G +G+DV+ G
Sbjct: 2861 TDKTGLSASATAGQLLNANLLGSSQSTSIVEGTQNGDTVNGTSGNDRLYGYNGDDVLNGG 2920
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENAIIVYDANEHKQDF 337
N++ +GND +G +G D A ++ +E + + D
Sbjct: 2921 DGNDLLRGGAGNDTLNGGNGNDILIGGAGDDTLTGGAGTDVFLWEVVTPADNTGGNGHDV 2980
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++D + + ++ YTA +
Sbjct: 2981 ITDFQLATGPTDTGGDKIDLSKLLVGYTADAD 3012
>gi|99081440|ref|YP_613594.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
gi|99037720|gb|ABF64332.1| Hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
Length = 303
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 8/135 (5%)
Query: 199 KGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTL----IGGVKNYIDLNTESWS 251
G+++ + T+ G+D ++ I G L
Sbjct: 118 NFQAGDDVITLGFGDDVINGGRGNDTVSAGAGNDTINGNAGRDQINGHDGDDVLTGGGGR 177
Query: 252 S-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N ++ + + +VG +GND + G + ++V +G+DV G +G D F +
Sbjct: 178 DKLNGGVGNDVLSGNAGRDKLVGGTGNDTLSGGADDDVLRGGTGDDVLTGGAGADVFKFR 237
Query: 311 APSYLYKIYRFENAI 325
A + I FE +
Sbjct: 238 ANDHTNVITDFEVGV 252
>gi|148679223|gb|EDL11170.1| matrix metallopeptidase 15, isoform CRA_b [Mus musculus]
Length = 517
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 56/173 (32%), Gaps = 49/173 (28%)
Query: 52 QEVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVC 90
E R A W +V L F+E S H D G++
Sbjct: 17 MEAVRRAFQVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLA 76
Query: 91 TPRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ + +FD + W + G L A+HE+GHALGL H + +
Sbjct: 77 HAYFPGPGLGGDTHFDADEPWTFSSTDLHGISLFLVAVHELGHALGLEHSSNPSA----- 131
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+M+ F + D+ +Q++YG+P G
Sbjct: 132 --------------IMAPFYQWMDTDNFQ------LPEDDLRGIQQLYGSPDG 164
>gi|304311993|ref|YP_003811591.1| Hemolysin-type calcium-binding protein [gamma proteobacterium HdN1]
gi|301797726|emb|CBL45948.1| Hemolysin-type calcium-binding protein [gamma proteobacterium HdN1]
Length = 3043
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 13/153 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSSG 303
G + TI H +++ GS GND ++G AN+V +GND DG G
Sbjct: 1228 FDGLNGDDTIYGHDGNDTLSGSGGNDTLMGGYANDVLRGGEGNDSLNGENGNDTLDGGVG 1287
Query: 304 LDTFFYYAPSYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
D A S Y I + ++ YDA + D +S + + N
Sbjct: 1288 DDYLSGGAGSDTYLIDANSGSDVIQDYDATGNDYDKVSFGSGITAQNLTFSRKNNDVCVT 1347
Query: 362 LEYTASYEDLIQVIGQDVFESMKH--FYEFGLS 392
+ Y + G SM ++ G
Sbjct: 1348 VNYNGDQSSFVIANGFANAASMVDGFWFSNGWY 1380
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 40/104 (38%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ I L E S+ G + + +IA ++V G++GND + G N++ G D
Sbjct: 1540 TSQADAITLIGEVDDSVSGLDGDDSIAAMGGNDTVNGNAGNDRLDGGFGNDIVVGGDGQD 1599
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G +G DT S Y+ + + + D
Sbjct: 1600 TLIGGTGSDTLQGGYGSDTYRFNLGDGQDRIEENMASGAGTDRD 1643
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 27/65 (41%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N +A +++ G GND + G + N+ GND G +G DT S
Sbjct: 1888 GNETYNDQLAGGGGNDNLYGYGGNDSLDGGAGNDTLSGEEGNDTLIGGTGNDTLQGSYGS 1947
Query: 314 YLYKI 318
Y+
Sbjct: 1948 DTYRF 1952
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 10/127 (7%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I + G GND + GN+ N+V +G+DV G SG D F + +
Sbjct: 865 NGVIYGDAGNNYLFGLDGNDQLSGNAGNDVLDGGTGDDVLIGGSGNDQFRFG-------V 917
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D + D +S V + AD I + T +D+++V G
Sbjct: 918 GYGHDRVRTQDTVTGRYDVISIVGGITAADVSITRQADDLVISILGT---DDVLRVEGHF 974
Query: 379 VFESMKH 385
E H
Sbjct: 975 SQEGASH 981
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 36/86 (41%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G I T + + G + +DV+ G S ++ +GND+ GS+G D A
Sbjct: 1055 ISGDGGADRIFGGTGNDQLSGGTEDDVLYGESGHDTLSGDAGNDILVGSTGDDLLIGGAG 1114
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ +Y + ++ + D +
Sbjct: 1115 NDIYLFNVGDGLDVIDNRGSSNDDDV 1140
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 3/124 (2%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N V + + G GND + G S N++ GND G G DT+ + S +
Sbjct: 2539 ANTLYGNDVVADWLGGGGGNDTLYGYSGNDMLDGGVGNDTLVGGIGNDTYVVDSLSDVVT 2598
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ V + ++E L F + I+ +I+ + L G
Sbjct: 2599 ESASQGIDTVNSSITWVLGT--NLENLTLFGNGAINGTGNTLNNIITGNDADNVLTGGRG 2656
Query: 377 QDVF 380
DV
Sbjct: 2657 SDVL 2660
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 1/144 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + +S+ G +GND + G N+ +GND GS G DT+ +
Sbjct: 1896 LAGGGGNDNLYGYGGNDSLDGGAGNDTLSGEEGNDTLIGGTGNDTLQGSYGSDTYRFNLG 1955
Query: 313 SYLYKIYRFENA-IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+I + + D ++ L + + L Y
Sbjct: 1956 YGQDRIEEYMASNGTDVDRIAFGAGITANDLALSVSGNNLVITVGTNGDSLTINNWYNSA 2015
Query: 372 IQVIGQDVFESMKHFYEFGLSEGR 395
+ + L EGR
Sbjct: 2016 SYRVEEFELADGTLLNAQSLLEGR 2039
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N +A +++ G G+D + G + N+ + GND +G G DT
Sbjct: 2379 YGNNAYNDQLAGGGGNDNLYGYGGDDRLNGGADNDTLSGAEGNDTLNGGIGNDTLQGSYG 2438
Query: 313 SYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFA 347
S Y + + + + D ++R+ F
Sbjct: 2439 SDTYCFNLGDGQDRIEEYMASNGTD----IDRIVFG 2470
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N +A +++ G +G+D++ G + ++ + GND G G DT
Sbjct: 2051 HGNNSYNDQLAGRGGNDTLYGYAGDDLLDGGTGDDTLSGAEGNDTLIGGVGNDTLQGSYG 2110
Query: 313 SYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFA 347
S Y+ + + + + D ++R+ F
Sbjct: 2111 SDTYRFNLGDGQDRIEEYMASNGTD----IDRIVFG 2142
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 52/151 (34%), Gaps = 14/151 (9%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTES----WSS 252
GN++Y + K T+ GG D + I ++N + S
Sbjct: 2811 DNTITGNDLYGNIIDGKA--GADTMMGLGGGDTY--IVDNANDQVIENVNAGTDLVRASV 2866
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
N+ T S + +GN + + GNSA N G D+ G +G D +
Sbjct: 2867 TFSLSDNVENLVLTGA-SAISGNGNQLNNQITGNSAANTLDGKEGTDILTGGAGNDAYLM 2925
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I +A+ D + QD +D
Sbjct: 2926 GRGYGSDTIVE-NDALANTDVLQFGQDIAAD 2955
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 12/151 (7%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESW 250
G+ NNI + G+D ++ ++ D+ S
Sbjct: 2634 TGNTLNNIITGNDADNVLTGGRGSDVLIGRKGNDTYVVDDINYQIVEAEAEGTDVVQSSL 2693
Query: 251 S-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ ++ +N+T+ T I + G+ + +IGNSA+N GNDV DG +G D
Sbjct: 2694 TWTLAQNVENLTLTGTTAI-NGTGNQQANSLIGNSASNRLEGLEGNDVLDGGAGADAMVG 2752
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+Y + + +I + D +
Sbjct: 2753 GLGDDIYYLENTADKVIEL--AQQGMDTIYS 2781
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N I +++ G +GND ++G + N+ GND G G D+
Sbjct: 1723 YGADGTNDYIGGADGDDTLNGLTGNDRLMGGAGNDTLMGGDGNDELAGGVGNDSLQGSYG 1782
Query: 313 SYLYKIYRFEN 323
S Y+ + +
Sbjct: 1783 SDTYRFNQGDG 1793
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 11/136 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS----IGGYEKNMTIAQ 264
+ ++ I S G +++ + N I+++++ S I G N I
Sbjct: 974 FSQEGASHSYVDAIVFSDGT-TINVGV--SEFNNINVSSQVISDADNEIHGTSDNDVINA 1030
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ V G +G+D ++G + N+ G D G +G D + +
Sbjct: 1031 LAGNDQVFGKTGDDEILGGAGNDAISGDGGADRIFGGTGNDQLSGGTEDD----VLYGES 1086
Query: 325 IIVYDANEHKQDFLSD 340
+ + D L
Sbjct: 1087 GHDTLSGDAGNDILVG 1102
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ + + + +G+D + G N+ +GND+ GS G DT+ +
Sbjct: 2224 LAGRGGNDTLYGYAGDDLLDSGTGDDTLSGAEGNDSLIGGAGNDILQGSYGSDTYRFNLG 2283
Query: 313 SYLYKIYRF 321
+I +
Sbjct: 2284 DGQDRIEEY 2292
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N +A +++ G +G+D++ + ++ + GND G +G D
Sbjct: 2215 HGNNSYNDQLAGRGGNDTLYGYAGDDLLDSGTGDDTLSGAEGNDSLIGGAGNDILQGSYG 2274
Query: 313 SYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFA 347
S Y+ + + + + D ++R+ F
Sbjct: 2275 SDTYRFNLGDGQDRIEEYMASNGTD----IDRIVFG 2306
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G Y + + + G+ G+D + G + N+ +GND G G D
Sbjct: 1714 VGSYVADQLYGADGTNDYIGGADGDDTLNGLTGNDRLMGGAGNDTLMGGDGNDELAGGVG 1773
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL--------SDVERLRFA 347
+ + + QD++ +D++R+ F
Sbjct: 1774 ND--SLQGSYGSDTYRFNQGDGQDWIEEYMASNGTDIDRIVFG 1814
Score = 44.3 bits (103), Expect = 0.072, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 67/241 (27%), Gaps = 75/241 (31%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND-------- 278
G+D++ L GG N ++ GY N + +++VG GND
Sbjct: 2544 GNDVVADWLGGGGGND---------TLYGYSGNDMLDGGVGNDTLVGGIGNDTYVVDSLS 2594
Query: 279 -----------------------------VVIGN-----------------SANNVFFES 292
+ GN A+NV
Sbjct: 2595 DVVTESASQGIDTVNSSITWVLGTNLENLTLFGNGAINGTGNTLNNIITGNDADNVLTGG 2654
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G+DV G G DT+ Y+I E + +VE L
Sbjct: 2655 RGSDVLIGRKGNDTYVVD--DINYQIVEAEAEGTDVVQSSLTWTLAQNVENLTLTGTTAI 2712
Query: 353 SVNVK-QRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ Q + L ++ L + G DV + GL D YL +
Sbjct: 2713 NGTGNQQANSLIGNSASNRLEGLEGNDVLDGGAGADAMVGGLG-------DDIYYLENTA 2765
Query: 410 D 410
D
Sbjct: 2766 D 2766
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFFY 309
++ GY + + T +++ G+ GND +IG + N++ S G+D F+ G D
Sbjct: 2232 TLYGYAGDDLLDSGTGDDTLSGAEGNDSLIGGAGNDILQGSYGSDTYRFNLGDGQDRIEE 2291
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
Y S I R IV+ A D V
Sbjct: 2292 YMASNGTDIDR-----IVFGAGIFANDLALSV 2318
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFFY 309
++ GY + + T +++ G+ GND +IG N+ S G+D F+ G D
Sbjct: 2068 TLYGYAGDDLLDGGTGDDTLSGAEGNDTLIGGVGNDTLQGSYGSDTYRFNLGDGQDRIEE 2127
Query: 310 YAPSYLYKIYR 320
Y S I R
Sbjct: 2128 YMASNGTDIDR 2138
>gi|152967558|ref|YP_001363342.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
SRS30216]
gi|151362075|gb|ABS05078.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
SRS30216]
Length = 868
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 25/157 (15%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN---NIYKIEVQQKDSPFIQTIYDSG 226
+S+ ++ Y P +Y + ++ I++ ++ + TI +
Sbjct: 725 NSVESFAYQYTGDP---------ALYAPNPYRSSDHDPVVFGIDLDERCQGLVPTIRGTA 775
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD+L T V + G N I + + G G+D + G + +
Sbjct: 776 GDDVLKGTNGRDV-------------VVGLGGNDVITGGNGDDVLCGGDGDDRISGGNGD 822
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+V +G DV +G +G D A + R +
Sbjct: 823 DVLVGGTGKDVLNGDNGSDRLLGGAGVDVLDQGRGQG 859
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRFEN 323
++ G++G+DV+ G + +V GNDV G +G D +
Sbjct: 770 TIRGTAGDDVLKGTNGRDVVVGLGGNDVITGGNGDDVLCGGDGDDRISGGNGDDVLVGGT 829
Query: 324 AIIVYDANEHKQDFLSD 340
V + + L
Sbjct: 830 GKDVLNGDNGSDRLLGG 846
>gi|330863716|emb|CBX73817.1| hypothetical protein YEW_GI27150 [Yersinia enterocolitica W22703]
Length = 778
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 28/184 (15%)
Query: 222 IYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+Y GDD++ DL+ G I G N I + G GND +
Sbjct: 570 LYAKHGDDVISDLSGRGHK-------------IYGDVGNDIIYAKGGNNMLSGGDGNDEL 616
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + N++ + G+D+ + G++ F Y I++D
Sbjct: 617 FGGNGNDLLYGGQGDDILNSGDGINVFAGEEGDDSYVFEPGHGDNIIFDNKGRNSIIFKG 676
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
++ + + + S + + +F GR TF
Sbjct: 677 IDY-----RVLQFKKQDSNLTININNSNKAVTIA---------NYFVVGAEQRGRLFTFK 722
Query: 401 SYLY 404
+ Y
Sbjct: 723 TDEY 726
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 10/112 (8%)
Query: 268 IESVVG-SSGNDVVIGNSANNVFFESSGN--DVFDGSSGLD-------TFFYYAPSYLYK 317
IE+ G D++IGN NV G D +G G D T Y
Sbjct: 175 IENAYGQKDKKDLLIGNDNVNVLNGGGGYTEDRLEGGGGNDILTLLRGTAVGGEGIDTYI 234
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + E QD +S ++ +D+ ++ + Y
Sbjct: 235 ISSASYSAAHVVIYEDAQDEVSIIQLQAKSDRIESIELKNNDIVIRFIDDYN 286
>gi|291222679|ref|XP_002731343.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 437
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 57/196 (29%), Gaps = 48/196 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSD 78
D W + Y+ T D + A WS V LTF E + +D
Sbjct: 68 DSKWDKRDLTYEYLSYTNDVSKDD-------QRNAISRAFKRWSDVTPLTFTEVTDGGAD 120
Query: 79 IKFIS--------SNNGYVCTPRYDSRYFMEINFDK--ADVWRYGIGKGT----ILSHNA 124
I N + + + N D D+ + + GT L A
Sbjct: 121 ISLDFVVGDHGDGDANAFNRKGEVMAHAYPPGNGDIHFNDLENFAVDSGTADGIDLEWVA 180
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HEIGH+LGL H + SVM +
Sbjct: 181 THEIGHSLGLGHS-------------------EYHKSVM-------HSKYPGYISNLQLT 214
Query: 185 VSDIVAVQKIYGAPKG 200
D+ +Q IYG K
Sbjct: 215 RDDVNGIQAIYGKNKY 230
>gi|261820530|ref|YP_003258636.1| type 1 secretion target domain protein [Pectobacterium wasabiae
WPP163]
gi|261604543|gb|ACX87029.1| type 1 secretion target domain protein [Pectobacterium wasabiae
WPP163]
Length = 2542
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Query: 195 YGAPKGSLGNNI----YKIEVQQKDSPFIQTIYDSGGDDLLD------------LTLIGG 238
YG G+ GN+ Y +V D I D G L +
Sbjct: 2310 YGLSVGTAGNDTMSGTYNDDVLFGDVVSFPNI-DGNGITALQNYIGKQLGMQTGVPTTKD 2368
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ NYI ++ + N + + + G GND + G + N++ + SG+D+
Sbjct: 2369 MHNYIASHSSEFDLSPAKGGNDILNGGDGDDILFGQGGNDTLYGGAGNDLLYGGSGDDIL 2428
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
G +G DT A + +K + ++ D N + D +
Sbjct: 2429 IGGAGGDTLIGGAGADTFKWQAGDIGNDVIKDFNAKEGDRI 2469
>gi|114640107|ref|XP_508723.2| PREDICTED: stromelysin-1 isoform 4 [Pan troglodytes]
Length = 477
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 52/190 (27%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 221 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 256
Query: 189 VAVQKIYGAP 198
+Q +YG P
Sbjct: 257 NGIQSLYGPP 266
>gi|296447778|ref|ZP_06889692.1| Methyltransferase type 11 [Methylosinus trichosporium OB3b]
gi|296254697|gb|EFH01810.1| Methyltransferase type 11 [Methylosinus trichosporium OB3b]
Length = 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
F++ YL +Y D+ G D ARHY+ HG E R+P AF Y+ SH ++ A
Sbjct: 22 FNADWYLHTYPDV-KATGLD---PARHYLDHGAAEKRDPSWAFSTAAYLDSHPEVARAGV 77
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF 480
+ HF G GR
Sbjct: 78 NP-------LLHFIRAGGCAGRA 93
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY 408
+ + + Y +Y D+ + +H+ + G +E RD + F + YL S+
Sbjct: 14 LSLRMSRYFNADWYLHTYPDVKA----TGLDPARHYLDHGAAEKRDPSWAFSTAAYLDSH 69
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGR 435
++ H+I G GR
Sbjct: 70 PEVARA----GVNPLLHFIRAGGCAGR 92
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
F++ YL +Y D+ G D ARHY+ HG E R+P AF Y+ SH ++ A
Sbjct: 22 FNADWYLHTYPDV-KATGLD---PARHYLDHGAAEKRDPSWAFSTAAYLDSHPEVARAGV 77
Query: 542 DAPDLVQAGKDHFSNFGYEEGRS 564
+ HF G GR+
Sbjct: 78 NP-------LLHFIRAGGCAGRA 93
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 13/94 (13%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F A Y+ ++ D+ D H+ + G E R + F+ YL S+
Sbjct: 17 RMSRYFNADWYLHTYPDVKATGLDP-------ARHYLDHGAAEKRDPSWAFSTAAYLDSH 69
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
++ H+I G GRA +
Sbjct: 70 PEVARA----GVNPLLHFIRAGGCAGRAEPAPSV 99
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 13/87 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSY 492
R F A Y+ ++ D+ D H+ + G E R ++ + YL S+
Sbjct: 17 RMSRYFNADWYLHTYPDVKATGLDPA-------RHYLDHGAAEKRDPSWAFSTAAYLDSH 69
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR 519
++ H+I G GR
Sbjct: 70 PEVARAG----VNPLLHFIRAGGCAGR 92
>gi|300868145|ref|ZP_07112778.1| hypothetical protein OSCI_3580002 [Oscillatoria sp. PCC 6506]
gi|300333848|emb|CBN57958.1| hypothetical protein OSCI_3580002 [Oscillatoria sp. PCC 6506]
Length = 1744
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 8/151 (5%)
Query: 198 PKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
+ +Y I+ G+D + + ++ G N + +
Sbjct: 1548 NGNVGNDTVYGGVENDTLFGGKGFDLIFGDRGNDTIYGNRGNDSISGDEGNDVSYGGKGN 1607
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + + +++ G S ND+V G S +++ F GND+F G G DT
Sbjct: 1608 DVVLGGLGDDQLLGDQGNDTLCGGSDNDIVFGGSGDDLLFGDIGNDLFFGGLGSDTLLGG 1667
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
S + + A V D D L V
Sbjct: 1668 GGSDRFILASGSVADTVID-FAQGTDSLVLV 1697
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 49/180 (27%), Gaps = 36/180 (20%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ IY I+ G D ++ G N T+
Sbjct: 1527 DTIYGFNGND-------AIFGQQGSDYIN----------------------GNVGNDTVY 1557
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G G D++ G+ N+ + + GND G G D + +
Sbjct: 1558 GGVENDTLFGGKGFDLIFGDRGNDTIYGNRGNDSISGDEGNDVSYGGKGND----VVLGG 1613
Query: 324 AIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D L SD + + + + L+ G D F
Sbjct: 1614 LGDDQLLGDQGNDTLCGGSDNDIVFGGSGDDLLFGDIGNDLFFGGLGSDTLLGGGGSDRF 1673
>gi|1710794|sp|P55129|RTX12_ACTPL RecName: Full=RTX-I toxin determinant A from serotypes 5/10;
AltName: Full=APX-IA; AltName: Full=Cytolysin IA;
Short=CLY-IA; AltName: Full=Hemolysin IA; Short=HLY-IA
gi|497787|dbj|BAA04014.1| RTX toxin I type L [Actinobacillus pleuropneumoniae]
Length = 1023
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 31/256 (12%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + I+ G+D L G I ++ + G + +
Sbjct: 744 DDEIYGNDGHDILYGDDGNDVIHGGDGNDHL--VGGNGNDRLIGGKGNNFLNGGDGDDEL 801
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + ++G +GND++ G+ N+F GND G G D + Y + I
Sbjct: 802 QVFEGQYN-VLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEYGRHIIIE 860
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ DV +R D + + + L Y Y
Sbjct: 861 KGGDDDTLLLSDLS---FKDVGFIRIGDDLLVNKRIGGT--LYYHEDY--------NGNA 907
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++K +++ G EG + + + D Y+T GR + F
Sbjct: 908 LTIKDWFKEG-KEG------------QNNKIEKIVDKDGAYVLSQYLTELTAPGRGINYF 954
Query: 441 KALEYIASHEDLINAF 456
LE + + NA
Sbjct: 955 NGLEEKLYYGEGYNAL 970
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D + GN +++ + GNDV G G D + + N +
Sbjct: 736 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 795
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D ++ Q F L ++ + + + +G+D+
Sbjct: 796 DGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDI 846
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GNDV+ G N+ +GND G G +
Sbjct: 738 FHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGDG 797
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+++ + +++ A + I Y+ Y
Sbjct: 798 DDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEY 853
>gi|330862952|emb|CBX73087.1| hypothetical protein YEW_HI32550 [Yersinia enterocolitica W22703]
Length = 449
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G + +IGG N I + S + G N I H +S+ G GND++IG
Sbjct: 105 DFIGHKYIRNKVIGGDGNNI-IQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIG 163
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N+ +GND+ DG G D A
Sbjct: 164 GEGNDGLTGGAGNDILDGGDGNDQLHGDAD 193
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I +++ G +GND++ G+++ + F GND+ G G D A +
Sbjct: 118 GGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGND 177
Query: 315 LYKIYRFEN 323
+ +
Sbjct: 178 ILDGGDGND 186
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 24/142 (16%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGD +L GG N I S+ S+ G + N + + + G +GND++ G
Sbjct: 127 GGDKSDNLA--GGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGNDILDGGDG 184
Query: 286 NNVF----------------------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
N+ F GND +G D + Y ++
Sbjct: 185 NDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGNDSYIFSAYDG 244
Query: 324 AIIVYDANEHKQDFLSDVERLR 345
++ + + + +
Sbjct: 245 INMIVEYSNEENTISINDHFFH 266
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 20/164 (12%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
D + + I G GNNI + I+ D +L G N
Sbjct: 104 DDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFD----SLFGQDGND 159
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGS-------------SGNDVVIGNSANNVF 289
I + E + G N + + + G GND++ G N+
Sbjct: 160 ILIGGEGNDGLTGGAGNDILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRI 219
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
ND G +G D++ + A + I + N N+H
Sbjct: 220 EGEKNNDYLAGGTGNDSYIFSAYDGINMIVEYSNEENTISINDH 263
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 9/148 (6%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + I + V+G GN+++ G ++ +GND+ G + D+ F + +
Sbjct: 102 DNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDIL 161
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I N + A D ++L D + + S + + G
Sbjct: 162 -IGGEGNDGLTGGAGNDILDGGDGNDQL-HGDADGLASFASESSW----RGNDIIFGGKG 215
Query: 377 QDVFESM--KHFYEFGLSEGRDITFDSY 402
D E + G F +Y
Sbjct: 216 NDRIEGEKNNDYLAGGTGND-SYIFSAY 242
>gi|257093898|ref|YP_003167539.1| Hemolysin-type calcium-binding region [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046422|gb|ACV35610.1| Hemolysin-type calcium-binding region [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 893
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 225 SGGDDLLDLTLIGG--------VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
G + +D + GG N +D + ++ ++I + ++GSSG
Sbjct: 740 KNGVETVDASGAGGPVRLLGDWADNLLDFSATTF------IGKVSIDGGGGQDRIIGSSG 793
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
DV++G ++ +GND G SG DTF + + F++ + D +
Sbjct: 794 ADVMLGGYGADILDGRAGNDRISGGSGGDTFLFGKAWGRDVVTDFQDGVDRLDLRDAGVT 853
Query: 337 FLSDVER 343
L D+
Sbjct: 854 KLKDLHI 860
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY------IDLNTESWSSIG 254
++G+ IY + + +D F+ + G+ L+ + N+ I L E+ ++I
Sbjct: 445 TVGDGIYHLGFEIRDGRFL----NEDGNPNATLSDVATWLNFFYGKAPIVLGDEAANTIN 500
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E+ I ++V G GND++ G ++ G D+ G +G D+ +
Sbjct: 501 GDERGEQINAGGGNDTVAGGGGNDLIYGGWGSDSLSGGDGEDLIYGGTGNDSLAGGDGND 560
Query: 315 LYKIYRFEN 323
++++ +
Sbjct: 561 IFRVTGNTD 569
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 16/129 (12%)
Query: 225 SGGDDLLDLTLIGG--------VKNYIDLNTESWS---SIGGYEKNMTIAQHTVIESVVG 273
G + +D + GG N +D + ++ SI G TI +++ G
Sbjct: 604 KNGVETVDASGAGGPVRLLGDWTDNLLDFSATTFVGKVSIDGGGGKDTIIGSAGDDNIDG 663
Query: 274 SS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL----YKIYRFENAIIVY 328
S G+ V+ G + N+V +G D G SG DTF S Y Y
Sbjct: 664 GSWGDQVLAGGNGNDVLHGGTGTDQLFGGSGDDTFRVTGNSGNGFEGYDSYDGGAGKDRI 723
Query: 329 DANEHKQDF 337
A K D
Sbjct: 724 VAYGGKVDI 732
>gi|168705243|ref|ZP_02737520.1| Hemolysin-type calcium-binding region [Gemmata obscuriglobus UQM
2246]
Length = 738
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 72/229 (31%), Gaps = 30/229 (13%)
Query: 193 KIYGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+++G + + + I Y V + +GG D+L+ GG N ++
Sbjct: 265 ELWGGAENNRFDAIGYTGTVMFHGGAGADWLRGTGGGDVLN----GGEGNDTLSGEGNFD 320
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT----- 306
+ G N + +++ G GND + G + N+ +GND G +G D
Sbjct: 321 ILNGGAGNDALYGGDGNDNLDGGDGNDALYGGAGNDTLTGGAGNDGLYGGAGFDRVAENA 380
Query: 307 --FFYYAPSYLYKIYRFENAIIVYDANEH----------------KQDFLSDVERLRFAD 348
Y + + Y ++ A + +D + VE A
Sbjct: 381 RYAVVYVGADAVRSYFWQGAFMEFDPITEMEVVAVTGGAENNWFSANGYTGSVEFRGGAG 440
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGR 395
+ L A + L IG D+ G R
Sbjct: 441 NDTLLAGTSGDAALFGDAGNDTLGGGIGFDLLRGGAGNDTLTGGAGNDR 489
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
Y GG+ DL L + + G N I + + G GNDV+
Sbjct: 114 YADGGNGNDDLRGGSAADT---LTGGAGDDYLNGGAGNDAIDGGADNDIIHGGQGNDVLT 170
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ N+ S GND+ G +G D A +
Sbjct: 171 CGAGNDYASGSDGNDLLIGGTGNDFLAGGAGDDAFD 206
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 1/123 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ + + G +GND + G + N+ F +D G G D
Sbjct: 454 LFGDAGNDTLGGGIGFDLLRGGAGNDTLTGGAGNDRLFGEGDDDTLSGGFGNDVLDGGDG 513
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + D D + LR + ++E + + L
Sbjct: 514 NDVLGAVVTVGGLSGGWRQYTFADEPGD-DVLRGGSGNDTARGGSGNDVIEGGSGNDTLG 572
Query: 373 QVI 375
V+
Sbjct: 573 AVL 575
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 47/180 (26%), Gaps = 29/180 (16%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ I G+D L L+ + N +I I
Sbjct: 550 NDTARGGSGNDVIEGGSGNDTLGAVLVNVRR----------------TNNDSIYYWEDI- 592
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY---------YAPSYLYKIYR 320
G GNDV+ G ++ +GND G G D Y Y
Sbjct: 593 ---GEDGNDVIRGGDGDDTIKGGNGNDKLYGEGGNDMLGGETQLAYAQLSGDGYAYGFDL 649
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A +D L + D ++ + + Y D+ + D
Sbjct: 650 YGEAGDDELYGGTGKDILGGGDGKDILDGGGQYISPGYQILNALGQIYFDIDVAVAADGD 709
Score = 44.7 bits (104), Expect = 0.056, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 50/165 (30%), Gaps = 14/165 (8%)
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ T+ G+D L D TL GG N + + G + N + +
Sbjct: 473 RGGAGNDTLTGGAGNDRLFGEGDDDTLSGGFGNDV---------LDGGDGNDVLGAVVTV 523
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G ++V SGND G SG D + +
Sbjct: 524 GGLSGGWRQYTFADEPGDDVLRGGSGNDTARGGSGNDVIEGGSGNDTLGAVLVNVRRTNN 583
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
D+ + +D D + D++ + Y D++
Sbjct: 584 DSIYYWEDIGEDGNDVIRGGDGDDTIKGGNGNDKLYGEGGNDMLG 628
>gi|158337688|ref|YP_001518864.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158307929|gb|ABW29546.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 535
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 6/148 (4%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
++ + GDD L +GG N + G E + + + +VG +G+
Sbjct: 392 GADALWGNQGDDDL----LGGRGNDRLWGNAGDDILRGGEGHDWLFGGNGADKLVGGNGD 447
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G + ++VF G D G G D Y A + V A
Sbjct: 448 DWLAGGAGDDVFVGGPGQDSLIGGLGNDVVQYQALMSDFTFRGGPEQFQVIGA--GGTQT 505
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYT 365
L +E L FA++ I ++ S +
Sbjct: 506 LLGIEFLEFANEQIAVHSLPFASSIPLL 533
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 46/150 (30%), Gaps = 8/150 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI + G SG+D+V G + + G+D+ G G D +
Sbjct: 342 LFGNTGNDTIDGGAGRDVAWGGSGDDLVFGGEGGDWLSGNEGSDILIGDEGADALWGNQG 401
Query: 313 SYLYKIYRF-----ENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEY 364
R NA D+L ++L + +
Sbjct: 402 DDDLLGGRGNDRLWGNAGDDILRGGEGHDWLFGGNGADKLVGGNGDDWLAGGAGDDVFVG 461
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ LI +G DV + +F G
Sbjct: 462 GPGQDSLIGGLGNDVVQYQALMSDFTFRGG 491
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 9/152 (5%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
D+ + + I G + + +++ G +GND + G S ++ G D G++G
Sbjct: 288 DIPQPTLNDILGTSQRDFLFGTKAADNIDGFAGNDFLFGLSGDDRIEGWQGRDWLFGNTG 347
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQ-RS 360
DT A + + D+LS E + D+ D++ Q
Sbjct: 348 NDTIDGGAGRD----VAWGGSGDDLVFGGEGGDWLSGNEGSDILIGDEGADALWGNQGDD 403
Query: 361 ILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
L + L G D + G
Sbjct: 404 DLLGGRGNDRLWGNAGDDILRGGEGHDWLFGG 435
>gi|35903106|ref|NP_919395.1| matrix metalloproteinase-14 [Danio rerio]
gi|32251078|gb|AAP74484.1| membrane-type matrix metalloproteinase 1 beta [Danio rerio]
Length = 621
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 57/199 (28%), Gaps = 56/199 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W I + T ++ E R A W V L F E S
Sbjct: 112 WDKNEITFCIQNYTPKVGEYETFE-------AIRKAFKVWESVTPLRFREISYSDIRDKV 164
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIG--KGT 118
H D G++ + + +FD A+ W G G
Sbjct: 165 VDFADIMLFFADGFHGDASPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTIGNKDLLGN 224
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
+ A+HE+GHALG+ H + +M+ F M F
Sbjct: 225 DVFLVAVHELGHALGMEHSNDPSA-------------------IMAPFYQW--METDHFV 263
Query: 179 YCATPMVSDIVAVQKIYGA 197
D +QK+YG
Sbjct: 264 LP----DDDRKGIQKLYGP 278
>gi|330942430|gb|EGH45030.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 472
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 47/134 (35%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 291 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 350
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G +++ +G D G +G DTF + +
Sbjct: 351 TEGNDVITGGAAHEQIFGLAGKDTLNGGWGDDILVGGAGADKLTGGTGADTFRFDQLTDS 410
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 411 YRTATTSSTDLVTD 424
>gi|114640102|ref|XP_001153759.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
Length = 477
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 57/195 (29%), Gaps = 48/195 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNHTPDLPR-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D + G+ Y + +I+FD + W GT L A HE
Sbjct: 161 SFAVKEHGDF-YSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHE 218
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + +M Y + A F D
Sbjct: 219 LGHSLGLFHSANTEA-------------------LM-YPLYNSFTELAQFRLSQ----DD 254
Query: 188 IVAVQKIYGAPKGSL 202
+ +Q +YG P S
Sbjct: 255 VNGIQSLYGPPPAST 269
>gi|123441657|ref|YP_001005641.1| putative RTX-family protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088618|emb|CAL11413.1| putative RTX-family protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 2110
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 28/184 (15%)
Query: 222 IYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+Y GDD++ DL+ G I G N I + G G+D +
Sbjct: 1902 LYAKHGDDVISDLSGRGHK-------------IYGDVGNDIIYAKGGDNMLSGGDGHDEL 1948
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + N++ + G+D+ + G++ F Y I++D
Sbjct: 1949 FGGNGNDLLYGGQGDDILNSGDGINVFAGGEGDDSYVFEPGHGDNIIFDNKGRNSIIFKG 2008
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
++ + + + S + + +F GR TF
Sbjct: 2009 IDY-----RVLQFKKQDSNLTININNSNKTV---------TIENYFVVGSEQRGRLFTFK 2054
Query: 401 SYLY 404
+ Y
Sbjct: 2055 TDEY 2058
Score = 37.8 bits (86), Expect = 6.8, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 30/165 (18%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTL--IGGVKNYIDLNTESWSSIGGYEKN- 259
+ Y ++ + ++ D G D L + G ++L Y N
Sbjct: 1443 DVFYLMDNVEASINSPASVLDGQDGSDTLIVMGLRFGNEGYELNLARG----YVKYINNE 1498
Query: 260 MTIAQHTVIESVVGSSGN-DVVIGNSANNVFFES-----------SGNDVFD-------G 300
+ +A IE+ G D++IG++ NV GND+ G
Sbjct: 1499 LRLATLLSIENAYGQKNKKDLLIGDNNVNVLNGGGGYTEDRLEGGGGNDILTLLRGTAVG 1558
Query: 301 SSGLDTFFYYAPSYLYK---IYRFENAIIVYDANEHKQDFLSDVE 342
G+DT+ + Y IY + + K D + +E
Sbjct: 1559 GEGIDTYIISSAPYSAAHVVIYEDALDEVSTIQLQAKSDKIESIE 1603
>gi|254422657|ref|ZP_05036375.1| alkaline phosphatase family protein, putative [Synechococcus sp. PCC
7335]
gi|196190146|gb|EDX85110.1| alkaline phosphatase family protein, putative [Synechococcus sp. PCC
7335]
Length = 1101
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 64/162 (39%), Gaps = 11/162 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + + +T+ GG+DL+ D+ + + + S S+ G +
Sbjct: 918 GDDDELVGTKVNETLTGLGGNDLIAGGLGNDIIEGNDGDDVLRGDNNSRSAGGTVGGDDI 977
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY----APSYLYK 317
+ T + + G GND + G +++ + +G+D+ G G D F + + +
Sbjct: 978 LFGGTGNDRIGGKGGNDQLFGEEGDDILYGDAGDDLLYGGPGNDQIFGDDNSSSGADTFV 1037
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ E ++ D + QD + + L F + + ++
Sbjct: 1038 LAAGEGTDLIMD-FDAGQDLIGLADDLSFDQLTLATDGIRFG 1078
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 3/132 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG+ N+ + G N++ GND+ +G+ G D S + I+
Sbjct: 921 DELVGTKVNETLTGLGGNDLIAGGLGNDIIEGNDGDDVLRGDNNSRSAGGTVGGDDILFG 980
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ ++L F ++ D + L Y D I G D S +
Sbjct: 981 GTGNDRIGGKGGNDQL-FGEEGDDILYGDAGDDLLYGGPGNDQI--FGDDNSSSGADTFV 1037
Query: 389 FGLSEGRDITFD 400
EG D+ D
Sbjct: 1038 LAAGEGTDLIMD 1049
>gi|237808027|ref|YP_002892467.1| Hemolysin-type calcium-binding region [Tolumonas auensis DSM 9187]
gi|237500288|gb|ACQ92881.1| Hemolysin-type calcium-binding region [Tolumonas auensis DSM 9187]
Length = 1461
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 69/222 (31%), Gaps = 33/222 (14%)
Query: 168 PQDSMMDASF-----GYCATPMVSDIVAVQKIYGAPKGSLGNN--IYKIEVQQKDSPFIQ 220
P ++ D + Y AT + I+ + G Y +
Sbjct: 1162 PNNTTADQDWLSNYSQYPATDPANSIINGGEFTSGIVLQTGVTQSYYGGNDIVYGTTGHD 1221
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ G+D + G N + +++VG G D +
Sbjct: 1222 TLLGGDGNDFI----------------------SGRAGNDMLYGGAGNDTLVGGYGIDKL 1259
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G+ N++ ND+ DG SG+DT Y + + N D S+
Sbjct: 1260 YGDDGNDILLGGPSNDILDGGSGIDTAMYSDATSGVTV----NLSTGTATGGDGTDIFSN 1315
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+E + ++ ++L+ + L +G D+
Sbjct: 1316 IENVTGSNFGDTLTGNDSVNVLDGGIGADTLTGGLGNDILTG 1357
>gi|190339264|gb|AAI62135.1| Matrix metalloproteinase 14 (membrane-inserted) beta [Danio rerio]
Length = 621
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 57/199 (28%), Gaps = 56/199 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W I + T ++ E R A W V L F E S
Sbjct: 112 WDKNEITFCIQNYTPKVGEYETFE-------AIRKAFKVWESVTPLRFREISYSDIRDKV 164
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIG--KGT 118
H D G++ + + +FD A+ W G G
Sbjct: 165 VDFADIMLFFADGFHGDASPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTIGNKDLLGN 224
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
+ A+HE+GHALG+ H + +M+ F M F
Sbjct: 225 DVFLVAVHELGHALGMEHSNDPSA-------------------IMAPFYQW--METDHFV 263
Query: 179 YCATPMVSDIVAVQKIYGA 197
D +QK+YG
Sbjct: 264 LP----DDDRKGIQKLYGP 278
>gi|41350992|gb|AAH65591.1| Mmp13 protein [Danio rerio]
Length = 386
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 63/188 (33%), Gaps = 27/188 (14%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
D W + + Y+ + T + E++ + AL W+ V L F S +D
Sbjct: 20 DYKWKKHQLTYRIENYT---PDMSVAEVD----DSISKALKVWADVTPLRFTRIYSGTAD 72
Query: 79 IKFISSNNGY-VCTPRYDSRYF------------MEINFDKADVWRYGIGKGTILSHNAL 125
I + + P F + +FD + + Y + L A
Sbjct: 73 IMISFATGDHRDGYPFDGPNGFLAHAFPPFEGIGGDAHFDDDETFSYRSPQYYNLFLVAA 132
Query: 126 HEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQD--SMMDASFGY 179
HE GH+LGL H YP Y VD + + S + P + D+
Sbjct: 133 HEFGHSLGLEHSQDPGALMYPTYVYRDVDRFVLPRDDVNGIQSLYGPNTDVNTDDSKPTP 192
Query: 180 CATPMVSD 187
TP D
Sbjct: 193 PVTPNTCD 200
>gi|226947103|ref|YP_002802176.1| secreted mannuronan C-5 epimerase [Azotobacter vinelandii DJ]
gi|226722030|gb|ACO81201.1| Secreted mannuronan C-5 epimerase [Azotobacter vinelandii DJ]
Length = 1839
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 6/135 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +A +++ G S + ++G + N+ +GND+ DG +G DT + S +++
Sbjct: 1666 VVLAGGDGNDTLSGGSAAEELLGGAGNDSLSGGAGNDILDGGAGRDTLSGGSGSDIFRFG 1725
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ Y++ + D ++D D +++ Y + ++ D
Sbjct: 1726 DALDSFRNYNSGANVTDSIADFTH------GADLIDLSALGYTGLGDGYNGTLAIVLNDA 1779
Query: 380 FESMKHFYEFGLSEG 394
G +EG
Sbjct: 1780 GTKTYLKDRGGDAEG 1794
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 5/138 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S G+ Y + + + +G + + G + ++ ++I G + N
Sbjct: 646 NSAGDRTYVKSYDTDANGYNFELSLAG-----NYQGLLGAEQFVFATPPEQATIEGTDGN 700
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ E ++G G D + G + ++V + D G +G DTF + A + Y+
Sbjct: 701 DTLQGTGADELLLGLGGRDSLNGGAGDDVLDGGAERDTLTGGTGADTFLFSARTDSYRTD 760
Query: 320 RFENAIIVYDANEHKQDF 337
++ D + +
Sbjct: 761 SASFTDLITDFDPAQDRI 778
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T +++ G N T+ E+++G G+D + G + N++ G D G +G DT
Sbjct: 1221 TGQQATLEGTTGNDTLGGSDAHETLLGLDGDDRLDGGAGNDILDGGVGRDTLTGGAGADT 1280
Query: 307 FFYYAPSYLYKI--YRFENAIIVYDANEHKQDF 337
F + A Y+ F + I +D + + D
Sbjct: 1281 FRFSAREDSYRTASTSFTDLITDFDPAQDRIDL 1313
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 37/73 (50%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ + ++G N+ +GND+ G +G DT A + +++ ++ Y
Sbjct: 544 DNLSGTDAGETLLGYGGNDTLNGGAGNDILVGGAGRDTLTGGAGADVFRFEALSDSQRNY 603
Query: 329 DANEHKQDFLSDV 341
A +++ D++ D
Sbjct: 604 TAGDNQGDYIIDF 616
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + +V E+++G +GND + G +++ +G+D G +G D F + A
Sbjct: 1378 IEGDAGNNALLGTSVAETLLGHAGNDTLDGAGGDDILVGGAGSDSLTGGAGADVFRFDAL 1437
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
S + Y + + + DF ++L
Sbjct: 1438 SDSQRNYDTGD-----NQGDRITDFAVGEDKL 1464
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--RFENAIIVYDA 330
G++GND + G +A+ V SG D G +G D F + + Y+ + + I +DA
Sbjct: 1537 GTAGNDSLQGTAADEVIHGGSGRDTLAGGAGADVFRFSELTDSYRTDSASYADLITDFDA 1596
Query: 331 NEHKQDF 337
+E + D
Sbjct: 1597 SEDRIDL 1603
>gi|1710793|sp|P55128|RTX11_ACTPL RecName: Full=RTX-I toxin determinant A from serotypes 1/9;
AltName: Full=APX-IA; AltName: Full=ApxI; AltName:
Full=Cytolysin IA; Short=CLY-IA; AltName: Full=Hemolysin
IA; Short=HLY-IA
gi|38950|emb|CAA37081.1| hemolysin I [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|505570|emb|CAA48586.1| structural protein A [Actinobacillus pleuropneumoniae]
Length = 1023
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 31/256 (12%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + I+ G+D L G I ++ + G + +
Sbjct: 744 DDEIYGNDGHDILYGDDGNDVIHGGDGNDHL--VGGNGNDRLIGGKGNNFLNGGDGDDEL 801
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + ++G +GND++ G+ N+F GND G G D + Y + I
Sbjct: 802 QVFEGQYN-VLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEYGRHIIIE 860
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ DV +R D + + + L Y Y
Sbjct: 861 KGGDDDTLLLSDLS---FKDVGFIRIGDDLLVNKRIGGT--LYYHEDY--------NGNA 907
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++K +++ G EG + + + D Y+T GR + F
Sbjct: 908 LTIKDWFKEG-KEG------------QNNKIEKIVDKDGAYVLSQYLTELTAPGRGINYF 954
Query: 441 KALEYIASHEDLINAF 456
LE + + NA
Sbjct: 955 NGLEEKLYYGEGYNAL 970
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D + GN +++ + GNDV G G D + + N +
Sbjct: 736 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 795
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D ++ Q F L ++ + + + +G+D+
Sbjct: 796 DGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDI 846
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GNDV+ G N+ +GND G G +
Sbjct: 738 FHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGDG 797
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+++ + +++ A + I Y+ Y
Sbjct: 798 DDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEY 853
>gi|255066629|ref|ZP_05318484.1| putative type 1 secretion protein [Neisseria sicca ATCC 29256]
gi|255049213|gb|EET44677.1| putative type 1 secretion protein [Neisseria sicca ATCC 29256]
Length = 922
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 55/149 (36%), Gaps = 8/149 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSS- 252
S GN+ V S ++ + +G ++ G + LN+ +
Sbjct: 309 NSSEGNDTVISSVSYTASTHVENVTLTGNANIYAAGNNSNNILTGNDGHNRLNSGRGNDT 368
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + G GND + G++ ++ +G D+ G +G DT+ Y
Sbjct: 369 VYGMGGNDNINGGDGNDYLDGGDGNDTINGDAGDDTLIGGAGKDMLKGGTGNDTYIYG-- 426
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
S I N + + + D +V
Sbjct: 427 SDDTIIDNQGNNTLKFSDDLRVSDIKVNV 455
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
K + G + V ++ + +G D++ G + + + + +
Sbjct: 52 KANEGQDTVYSNVSYTLPNNVENLVLTGSDNIY---GAGNNSDNVLVGNSGNNRLYSGRG 108
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T+ +++ G G+D + G+ N++ ++GNDV G G DT+ + S +
Sbjct: 109 NDTVYGGAGHDNINGGEGDDQLFGDEGNDILDGAAGNDVLQGGEGNDTYLFGEKSGKDTV 168
Query: 319 YRFENAIIVYDANEHKQDFLS 339
+ + + + D L+
Sbjct: 169 IDRQGSNSIRFLDGLSADDLT 189
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 36/102 (35%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GND + + +G+D +G G DT+ + I+ F I
Sbjct: 571 DKLYGGNGNDKLYARVGADYLDGGAGDDYLEGGDGRDTYVFGKGYGHDTIFDFGFDIDEE 630
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + L D I ++ ++YT D
Sbjct: 631 FNPTSISNAVKFTGGLTLDDLNISVTPGYDKTGIDYTPDPFD 672
Score = 44.3 bits (103), Expect = 0.065, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 40/115 (34%), Gaps = 1/115 (0%)
Query: 254 GGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+++ T +E+V + N GN++NN+ + G++ + G DT +
Sbjct: 315 DTVISSVSYTASTHVENVTLTGNANIYAAGNNSNNILTGNDGHNRLNSGRGNDTVYGMGG 374
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + D N+ D + A + + + + +
Sbjct: 375 NDNINGGDGNDYLDGGDGNDTINGDAGDDTLIGGAGKDMLKGGTGNDTYIYGSDD 429
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 17/152 (11%)
Query: 227 GDDLL--DLTLIGGVKNYIDLNTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVV 280
GDD D V+N + N SS+ + +N+T+ + I G++ N+++
Sbjct: 293 GDDTYYVDNAKDVVVENSSEGNDTVISSVSYTASTHVENVTLTGNANI-YAAGNNSNNIL 351
Query: 281 IGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
GN +N GND +G G D + + ++ A
Sbjct: 352 TGNDGHNRLNSGRGNDTVYGMGGNDNINGGDGNDYLDGGDGNDTIN-GDAGDDTLIGGAG 410
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + + + N ++
Sbjct: 411 KDMLKGGTGNDTYIYGSDDTIIDNQGNNTLKF 442
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 11/137 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT-ESWSSIGGYEKNMTIAQH 265
+ ++V Y + D D L G I S+ G T
Sbjct: 726 FGLKVSHVRKDGTIIQYLNDDSDTFDQRLYEGSNRIIHGTDNGDTVSVSGNYGGKT---- 781
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ +G SG+D V ++ +GND G S +T + S K+ +
Sbjct: 782 ----TFIGGSGDDTVKVGH-DSTIDAGAGNDTISGGSYANTITFGKGSGHDKL-SLNASG 835
Query: 326 IVYDANEHKQDFLSDVE 342
L D++
Sbjct: 836 EDNTVLFSGNLTLKDID 852
>gi|156707920|gb|ABU93235.1| recombinant pilin/cytotoxin fusion protein [synthetic construct]
Length = 410
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N + + G +G+D + G N+ G+D+ DG SG D A
Sbjct: 183 FKGSKFNDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNGGAG 242
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ +Y + + +YD + ++L FAD I + ++
Sbjct: 243 NDVYIFRKGDGNDTLYDG--------TGNDKLAFADANISDIMIE 279
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 16/131 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ K S F + GDDLLD G + + G + N ++
Sbjct: 178 QFNDVFKGSKFNDIFHSGEGDDLLDG---GAGDDR----------LFGGKGNDRLSGDEG 224
Query: 268 IESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
+ + G SG+DV+ G + N+V F + GND +G D F A I R +
Sbjct: 225 DDLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANISDIMIERTKEG 284
Query: 325 IIVYDANEHKQ 335
IIV +
Sbjct: 285 IIVKRNDHSGS 295
>gi|34395499|sp|Q44496|ALGE3_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 3; AltName:
Full=Mannuronan epimerase 3
gi|790694|gb|AAA87313.1| mannuronan C-5-epimerase [Azotobacter vinelandii]
Length = 1839
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 6/135 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +A +++ G S + ++G + N+ +GND+ DG +G DT + S +++
Sbjct: 1666 VVLAGGDGNDTLSGGSAAEELLGGAGNDSLSGGAGNDILDGGAGRDTLSGGSGSDIFRFG 1725
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ Y++ + D ++D D +++ Y + ++ D
Sbjct: 1726 DALDSFRNYNSGANVTDSIADFTH------GADLIDLSALGYTGLGDGYNGTLAIVLNDA 1779
Query: 380 FESMKHFYEFGLSEG 394
G +EG
Sbjct: 1780 GTKTYLKDRGGDAEG 1794
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 5/138 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S G+ Y + + + +G + + G + ++ ++I G + N
Sbjct: 646 NSAGDRTYVKSYDTDANGYNFELSLAG-----NYQGLLGAEQFVFATPPEQATIEGTDGN 700
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ E ++G G D + G + ++V + D G +G DTF + A + Y+
Sbjct: 701 DSLQGTGADELLLGLGGRDSLNGGAGDDVLDGGAERDTLTGGTGADTFLFSARTDSYRTD 760
Query: 320 RFENAIIVYDANEHKQDF 337
++ D + +
Sbjct: 761 SASFTDLITDFDPAQDRI 778
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T +++ G N T+ E+++G G+D + G + N++ G D G +G DT
Sbjct: 1221 TGQQATLEGTTGNDTLGGSDAHETLLGLDGDDRLDGGAGNDILDGGVGRDTLTGGAGADT 1280
Query: 307 FFYYAPSYLYKI--YRFENAIIVYDANEHKQDF 337
F + A Y+ F + I +D + + D
Sbjct: 1281 FRFSAREDSYRTASTSFTDLITDFDPAQDRIDL 1313
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 37/73 (50%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ + ++G N+ +GND+ G +G DT A + +++ ++ Y
Sbjct: 544 DNLSGTDAGETLLGYGGNDTLNGGAGNDILVGGAGRDTLTGGAGADVFRFEALSDSQRNY 603
Query: 329 DANEHKQDFLSDV 341
A +++ D++ D
Sbjct: 604 TAGDNQGDYIIDF 616
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + +V E+++G +GND + G +++ +G+D G +G D F + A
Sbjct: 1378 IEGDAGDNALLGTSVAETLLGHAGNDTLDGAGGDDILVGGAGSDSLTGGAGADVFRFDAL 1437
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
S + Y + + + DF ++L
Sbjct: 1438 SDSQRNYDTGD-----NQGDRITDFAVGEDKL 1464
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--RFENAIIVYDA 330
G++GND + G +A+ V SG D G +G D F + + Y+ + + I +DA
Sbjct: 1537 GTAGNDSLQGTAADEVIHGGSGRDTLAGGAGADVFRFSELTDSYRTDSASYADLITDFDA 1596
Query: 331 NEHKQDF 337
+E + D
Sbjct: 1597 SEDRIDL 1603
>gi|4505217|ref|NP_002413.1| stromelysin-1 preproprotein [Homo sapiens]
gi|116857|sp|P08254|MMP3_HUMAN RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; AltName:
Full=Transin-1; Flags: Precursor
gi|15294140|gb|AAK95247.1|AF405705_1 matrix metalloproteinase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|36633|emb|CAA28859.1| preprostromelysin [Homo sapiens]
gi|50960572|gb|AAH74815.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|77567646|gb|AAI07492.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|119587436|gb|EAW67032.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|189053854|dbj|BAG36115.1| unnamed protein product [Homo sapiens]
Length = 477
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 52/190 (27%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 221 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 256
Query: 189 VAVQKIYGAP 198
+Q +YG P
Sbjct: 257 NGIQSLYGPP 266
>gi|114640113|ref|XP_001154004.1| PREDICTED: matrix metalloproteinase 3 isoform 2 [Pan troglodytes]
Length = 410
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 52/190 (27%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 221 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 256
Query: 189 VAVQKIYGAP 198
+Q +YG P
Sbjct: 257 NGIQSLYGPP 266
>gi|307246322|ref|ZP_07528401.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255306|ref|ZP_07537119.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259741|ref|ZP_07541462.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|18026877|gb|AAL55666.1|AF240779_1 ApxIA [Actinobacillus pleuropneumoniae]
gi|312899|emb|CAA51548.1| apxIA [Actinobacillus pleuropneumoniae]
gi|606616|gb|AAB05034.1| RTX-1 toxin determinant [Actinobacillus pleuropneumoniae]
gi|306852792|gb|EFM85018.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861755|gb|EFM93736.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866209|gb|EFM98076.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 1022
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 31/256 (12%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + I+ G+D L G I ++ + G + +
Sbjct: 743 DDEIYGNDGHDILYGDDGNDVIHGGDGNDHL--VGGNGNDRLIGGKGNNFLNGGDGDDEL 800
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + ++G +GND++ G+ N+F GND G G D + Y + I
Sbjct: 801 QVFEGQYN-VLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEYGRHIIIE 859
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ DV +R D + + + L Y Y
Sbjct: 860 KGGDDDTLLLSDLS---FKDVGFIRIGDDLLVNKRIGGT--LYYHEDY--------NGNA 906
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++K +++ G EG + + + D Y+T GR + F
Sbjct: 907 LTIKDWFKEG-KEG------------QNNKIEKIVDKDGAYVLSQYLTELTAPGRGINYF 953
Query: 441 KALEYIASHEDLINAF 456
LE + + NA
Sbjct: 954 NGLEEKLYYGEGYNAL 969
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D + GN +++ + GNDV G G D + + N +
Sbjct: 735 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 794
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D ++ Q F L ++ + + + +G+D+
Sbjct: 795 DGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDI 845
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GNDV+ G N+ +GND G G +
Sbjct: 737 FHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGDG 796
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+++ + +++ A + I Y+ Y
Sbjct: 797 DDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEY 852
>gi|300869291|ref|ZP_07113882.1| putative Hemolysin-type calcium-binding region [Oscillatoria sp.
PCC 6506]
gi|300332668|emb|CBN59080.1| putative Hemolysin-type calcium-binding region [Oscillatoria sp.
PCC 6506]
Length = 1101
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 7/136 (5%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A LG T+ G+D +D GG N + ++ S+
Sbjct: 736 ANDSLLGGT---GNDVLSGGDGNDTVDGEDGNDTID----GGFNNDLLFGGDADDSLSAG 788
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N T+ T + + G +G+D + G + +++ G+D D +G D L
Sbjct: 789 EGNDTVYAGTGNDVLSGDAGDDSLYGEAGSDIVTGGVGDDTIDSGAGDDIVDGGVGRDLI 848
Query: 317 KIYRFENAIIVYDANE 332
++++ D ++
Sbjct: 849 DGGTGNDSVLGADGDD 864
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 14/179 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ I + I G+D +GG N I I G N +I
Sbjct: 686 DRTGIINDNFSGTALSDYIVGGTGNDTF----LGGDGNDI---------IDGRAGNDSIL 732
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S++G +GNDV+ G N+ GND DG D F +
Sbjct: 733 GQAANDSLLGGTGNDVLSGGDGNDTVDGEDGNDTIDGGFNNDLLFGGDADDSLSAGEGND 792
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ N+ D A I + V +I + + +G+D+ +
Sbjct: 793 TVYAGTGNDVLSGDAGDDSLYGEAGSDIVTGGVGDDTIDSGAGD-DIVDGGVGRDLIDG 850
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 10/165 (6%)
Query: 223 YDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSG 276
+ + G D LD TL GG N + L+ S + G +N T+ ++ G G
Sbjct: 142 FGNTGQDTLDGGTALDTLYGGKDNDL-LSGGSEGDLLFGNNENDTVIGGDGRDTGYGGKG 200
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + G SA++ F G D+ G G DT ++ E ++ +
Sbjct: 201 NDSLRGGSADDSLFGDLGEDIVWGDQGNDTL--SGGGGDDLLFGNEGGDWLFGNDSKDTI 258
Query: 337 FLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F + + + F D + V +L + L G+DVF
Sbjct: 259 FGGEGDDIVFGGDGDDNIVGESGNDVLWGEFGRDTLSGGDGRDVF 303
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 18/123 (14%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
++ G+D L + G E + + +++ G G+D+
Sbjct: 220 DIVWGDQGNDTLSGGGGDDLL-------------FGNEGGDWLFGNDSKDTIFGGEGDDI 266
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHK 334
V G ++ SGNDV G G DT ++ + F NA I
Sbjct: 267 VFGGDGDDNIVGESGNDVLWGEFGRDTLSGGDGRDVFVLGTFTAPNPSNASIPLVTTTGG 326
Query: 335 QDF 337
D
Sbjct: 327 PDI 329
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ + GDD + + T +GGV N L S+ G N T+ +
Sbjct: 850 GGTGNDSVLGADGDDTVLGDDGNDTQLGGVGNDYLLGEGGSDSLLGEAGNDTLDGGDGGD 909
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVY 328
S+ G GND+V+G N+ F ++G+D+ G G D A + + E I+
Sbjct: 910 SLNGGFGNDLVLGGGDNDTLFGAAGDDILGGGFGSDLLTGEAGNDFFYFETPAEGVDIIS 969
Query: 329 DANEHKQD 336
D N D
Sbjct: 970 DFNVSGSD 977
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 41/135 (30%), Gaps = 9/135 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQ 264
SP + I GG D L D + + + G G T+
Sbjct: 102 NDSLVGSPRVDVISGLGGADTLIGDGSDDELRGDDDDDLLFGNTGQDTLDGGTALDTLYG 161
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G S D++ GN+ N+ G D G G D+ + F +
Sbjct: 162 GKDNDLLSGGSEGDLLFGNNENDTVIGGDGRDTGYGGKGNDSLRGGSADDSL----FGDL 217
Query: 325 IIVYDANEHKQDFLS 339
+ D LS
Sbjct: 218 GEDIVWGDQGNDTLS 232
>gi|227821711|ref|YP_002825681.1| possible protease [Sinorhizobium fredii NGR234]
gi|227340710|gb|ACP24928.1| possible protease [Sinorhizobium fredii NGR234]
Length = 454
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 10/183 (5%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH- 265
Y + T+ G D L +Y+ + +S+ N A
Sbjct: 156 YGWD-NLYGGNGNDTLNGGAGSDELSGGAGSDTASYVGASEGVVASLKNLASNTNDASGD 214
Query: 266 --TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ IE++ G+S D + GN+ N +GND G +G D A + Y
Sbjct: 215 SYSSIENLTGTSYADTLEGNANANSLTGGNGNDRLIGRAGGDVLNGGAGTDSAYYYGATV 274
Query: 324 AII------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+I + N+ D S +E L + + L ++ L+ G
Sbjct: 275 GVIANLSNAAANTNDAAGDVYSSIESLVGSSYTDRLFGNGVANTLIGNGGHDSLVGYAGN 334
Query: 378 DVF 380
D
Sbjct: 335 DGL 337
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 7/148 (4%)
Query: 244 DLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+LN +++ + GY N I+ + + G G+D + G+ + + +GND +G +
Sbjct: 115 NLNGGEFANYLRGYAGNDVISGGQYSDDLFGDDGDDKISGDYGWDNLYGGNGNDTLNGGA 174
Query: 303 GLDTFFYYAPSYLYKIYRFENAII------VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G D A S ++ + N+ D S +E L
Sbjct: 175 GSDELSGGAGSDTASYVGASEGVVASLKNLASNTNDASGDSYSSIENLTGTSYADTLEGN 234
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L + LI G DV
Sbjct: 235 ANANSLTGGNGNDRLIGRAGGDVLNGGA 262
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 51/176 (28%), Gaps = 3/176 (1%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IES 270
+ G D+L+ Y +++ N A V IES
Sbjct: 241 TGGNGNDRLIGRAGGDVLNGGAGTDSAYYYGATVGVIANLSNAAANTNDAAGDVYSSIES 300
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VGSS D + GN N + G+D G +G D + A + + I +
Sbjct: 301 LVGSSYTDRLFGNGVANTLIGNGGHDSLVGYAGNDGLYGGAGADRLFGGTGADRFIFKET 360
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
E + ++Q V+ + I S +
Sbjct: 361 TESTSSVTDSIFDFLVSEQDRIDVSGIDARLSVGGDQAFVFIGTAAFSGDGSELRY 416
>gi|327542350|gb|EGF28834.1| protein containing Peptidase M10A and M12B, matrixin and adamalysin
domain [Rhodopirellula baltica WH47]
Length = 606
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 16/118 (13%)
Query: 37 THRLSFDITELNPNAQEVARW-ALGEWSKVVDLTFEETSIHS-----DIKFISSN----- 85
T+ ++ + L + A A W+ V D+ F E DI F + +
Sbjct: 19 TYTITGSPSTLTQEETDAAIETAFNAWASVADIEFTEVDQVGLNDSIDISFENLDGRAGT 78
Query: 86 --NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH---NALHEIGHALGLMHPG 138
Y +R +I FD ++ W G G A+HEIGH+LGL H
Sbjct: 79 LAQAYFPDDVNPARLAGDIQFDLSETWEVGNSLGNAAFDLVWVAVHEIGHSLGLDHTD 136
>gi|281346656|gb|EFB22240.1| hypothetical protein PANDA_000051 [Ailuropoda melanoleuca]
Length = 617
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 62/205 (30%), Gaps = 56/205 (27%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+N+ + + T + E R A W + L F+E
Sbjct: 79 YALTGRKWTNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPY 131
Query: 76 ---------------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYG 113
H D G++ + + +FD + W +
Sbjct: 132 EDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFS 191
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GHALGL H + + + +M D+
Sbjct: 192 STDLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQ----------------WMDTDT 235
Query: 172 MMDASFGYCATPMVSDIVAVQKIYG 196
D+ +Q++YG
Sbjct: 236 FQLPE---------DDLRGIQQLYG 251
>gi|163849808|ref|YP_001637851.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|163661413|gb|ABY28780.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
Length = 503
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 16/194 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+G + LDL + N + +++ G + + ++ + G +G+D +IG
Sbjct: 141 AGANGTLDLQFASSIDNAQLSGIIVRQANTLTGGPGSDYLVGGVGVDVLSGGAGDDALIG 200
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---- 338
++ N++ GND DG D + +Y + + +V +A++ D +
Sbjct: 201 HAGNDLLHGDDGNDTLDGGLNADHMSGGLGNDVYGVDDLGD--VVIEASDAGFDTVYSSI 258
Query: 339 -----SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
+DVE + + + + L A + L G D +
Sbjct: 259 SYVLPADVEAMILTGLENLSGTGNDGANTLAGNAGHNVLTGGGGNDLYGVDGNGDTVVEA 318
Query: 391 LSEGRDITFDSYLY 404
+ G D + S Y
Sbjct: 319 IDGGYDEVYSSGDY 332
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 27/190 (14%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
D+ D + + + +D+ A+ GN+ + + GG+
Sbjct: 247 SDAGFDTVYSSISYVLPADVEAMILTGLENLSGTGND---GANTLAGNAGHNVLTGGGGN 303
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES---------VVGSSGNDV 279
DL + G ++ + + + T+A++ IE+ G++ N+
Sbjct: 304 DLYGVDGNG--DTVVEAIDGGYDEVYS-SGDYTMAEN--IETLFLTGSAVYATGNAANNA 358
Query: 280 VIGNSANNVFFESS----------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+IGN +NV + GND+ G +G D A + +++ +A +
Sbjct: 359 IIGNDLDNVIDAGAGDFEFINGAGGNDLLIGGAGHDEIMGGAGNDVFRFTSLSDAGDFFF 418
Query: 330 ANEHKQDFLS 339
+D +
Sbjct: 419 DFTPGEDKIQ 428
>gi|88807497|ref|ZP_01123009.1| cell surface protein [Synechococcus sp. WH 7805]
gi|88788711|gb|EAR19866.1| cell surface protein [Synechococcus sp. WH 7805]
Length = 594
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 40/118 (33%), Gaps = 13/118 (11%)
Query: 224 DSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G G+D KN +DL + G + IE+V G +GND + G
Sbjct: 407 DGGEGNDT---AQFTEAKNRVDLRNAALQVTGDGVDQLI-----SIENVNGGAGNDKIKG 458
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
N N+ GND G G D + F + + +D L
Sbjct: 459 NRFANILNGEDGNDKLTGLGGGDVLSGEGGNDKL----FGGSGDDKLFGGNGKDKLKG 512
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 5/116 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G + ++ +IG +AN+ F G+D DG G DT + +
Sbjct: 377 DGLIGDNFDNALIGGAANDFVFGKLGDDFIDGGEGNDTAQFTEAKNRVDLRNAA-----L 431
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L +E + + +IL + L + G DV
Sbjct: 432 QVTGDGVDQLISIENVNGGAGNDKIKGNRFANILNGEDGNDKLTGLGGGDVLSGEG 487
>gi|163733385|ref|ZP_02140828.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
gi|161393173|gb|EDQ17499.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
Length = 902
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 54/168 (32%), Gaps = 13/168 (7%)
Query: 226 GGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
GG+D L + TL GG N L ++ G N + + ++G +G+D++
Sbjct: 525 GGNDFLLGGSGNDTLEGGDGNDRILGVTGNDTLRGELGNDVLNGGDGNDDMIGGNGDDIM 584
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHKQ 335
G + N+ GND+ G+ G D + ++
Sbjct: 585 YGGAGNDTMDGGDGNDLLIGNDGDDIMDGGLGNDNFRGGTGVDVIDGGVGDDRAFGGDGN 644
Query: 336 DFLSDVERLRFADQCIDS---VNVKQRSILEYTASYEDLIQVIGQDVF 380
D L + D IL + L+ GQD
Sbjct: 645 DTLRGGQGNDLMDGSAGDDVIEGNDGDDILVGRIGNDTLVGGTGQDQL 692
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 16/194 (8%)
Query: 203 GNNI-YKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGV---KNYIDLNTESWSS--IG 254
G++I Y + + GDD++D L +D+
Sbjct: 580 GDDIMYGGAGNDTMDGGDGNDLLIGNDGDDIMDGGLGNDNFRGGTGVDVIDGGVGDDRAF 639
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N T+ + + GS+G+DV+ GN +++ GND G +G D +
Sbjct: 640 GGDGNDTLRGGQGNDLMDGSAGDDVIEGNDGDDILVGRIGNDTLVGGTGQDQLRGGGGND 699
Query: 315 LYKIYR-----FENAIIVYDANEHKQDFLSD--VERLRFADQCIDSV-NVKQRSILEYTA 366
+ + F + DF+ + F + D + L A
Sbjct: 700 VLRGGDDNDRLFGGSNDDTLFGGDGDDFMQGNQQDDHLFGEAGSDRLFGGDGFDFLFGGA 759
Query: 367 SYEDLIQVIGQDVF 380
+ + L+ G DV
Sbjct: 760 ANDTLLGGRGNDVL 773
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 56/193 (29%), Gaps = 14/193 (7%)
Query: 202 LGNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G Y + F + I G+D L T N +D I G N
Sbjct: 472 TGQTDYLGAPNEAREGFYNFENIISGNGNDALSGT---AGANRMD-GGGGDDLITGLGGN 527
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +++ G GND ++G + N+ GNDV +G G D +
Sbjct: 528 DFLLGGSGNDTLEGGDGNDRILGVTGNDTLRGELGNDVLNGGDGNDDMIGGNGDDIMYGG 587
Query: 320 RF--------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N +++ + + D + R + L
Sbjct: 588 AGNDTMDGGDGNDLLIGNDGDDIMDGGLGNDNFRGGTGVDVIDGGVGDDRAFGGDGNDTL 647
Query: 372 IQVIGQDVFESMK 384
G D+ +
Sbjct: 648 RGGQGNDLMDGSA 660
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 8/159 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + Q + GGDD L + + + + G +++ +
Sbjct: 681 DTLVGGTGQDQLRGGGGNDVLRGGDDNDRLFGGSNDDTLFGGDGDDF--MQGNQQDDHLF 738
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G D + G +AN+ GNDV G G DT A + +++
Sbjct: 739 GEAGSDRLFGGDGFDFLFGGAANDTLLGGRGNDVLVGGLGSDTLVGGAQNDIFQFDS--- 795
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
V D+N + D ++ ++ + A ++ + L
Sbjct: 796 ---VADSNPFQHDSINGMDGVGVAGGDRIDLSNIDANTL 831
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 23/187 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ I G+D L L V N D N + G + + +
Sbjct: 536 NDTLEGGDGNDRILGVTGNDTLRGELGNDVLNGGDGND----DMIGGNGDDIMYGGAGND 591
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF------------------DGSSGLDTFFYYA 311
++ G GND++IGN +++ GND F G G DT
Sbjct: 592 TMDGGDGNDLLIGNDGDDIMDGGLGNDNFRGGTGVDVIDGGVGDDRAFGGDGNDTLRGGQ 651
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ L ++ I D ++ + + + L +L + L
Sbjct: 652 GNDLMDGSAGDDVIEGNDGDDILVGRIGN-DTLVGGTGQDQLRGGGGNDVLRGGDDNDRL 710
Query: 372 IQVIGQD 378
D
Sbjct: 711 FGGSNDD 717
>gi|149201402|ref|ZP_01878377.1| Hemolysin-type calcium-binding region [Roseovarius sp. TM1035]
gi|149145735|gb|EDM33761.1| Hemolysin-type calcium-binding region [Roseovarius sp. TM1035]
Length = 795
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 11/192 (5%)
Query: 220 QTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ + G+D L D G ++ ID +IGG + +++ G
Sbjct: 537 DTLAGNAGNDTLRGNAGNDRLAGGDGRDQIDGGAGHD-NIGGGLGADRLYGQAGDDTIGG 595
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+D++ G + ++ GND+ +G +G D + + I
Sbjct: 596 GAGDDMLFGGNGADILSGGPGNDLLEGGAGNDRLAGSFDHDTVR-GGLGDDRIGGGPGRD 654
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD-VFESMKHFYEFGLS 392
D + L + + L + L G D + H G
Sbjct: 655 LLDGGEGNDELGGGEADDTVLGGAGDDFLAGGGRNDLLDGGTGNDTLNAGAGHDRLIG-G 713
Query: 393 EGRDI-TFDSYL 403
EG DI F+ +
Sbjct: 714 EGADIFVFNDFT 725
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 57/183 (31%), Gaps = 16/183 (8%)
Query: 193 KIYGAPKGSL-----GNNI-YKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
++YG G+++ + P + G+D L +
Sbjct: 583 RLYGQAGDDTIGGGAGDDMLFGGNGADILSGGPGNDLLEGGAGNDRLAGSFDHDT----- 637
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ IGG + + + G +D V+G + ++ ND+ DG +G
Sbjct: 638 VRGGLGDDRIGGGPGRDLLDGGEGNDELGGGEADDTVLGGAGDDFLAGGGRNDLLDGGTG 697
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT A + + D ++D + D + D+ + Q
Sbjct: 698 NDTLNAGAGHDRLIGGEGADIFVFNDFTVGERDVIVDFQF--GEDRIRLTGIEGQGPTGR 755
Query: 364 YTA 366
+ A
Sbjct: 756 FLA 758
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 11/147 (7%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +++ G++GND + GN+ N+ G D DG +G D +
Sbjct: 523 GGAGDDLLQGGPEDDTLAGNAGNDTLRGNAGNDRLAGGDGRDQIDGGAGHDNIGGGLGAD 582
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ A D L + L L + ++ +
Sbjct: 583 RL----YGQAGDDTIGGGAGDDMLFGGNGADILSGGPGNDLLEGGAGNDRLAGSFDHDTV 638
Query: 372 IQVIGQDVF--ESMKHFYEFGLSEGRD 396
+G D + + G EG D
Sbjct: 639 RGGLGDDRIGGGPGRDLLDGG--EGND 663
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 33/108 (30%), Gaps = 7/108 (6%)
Query: 225 SGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMT-IAQHTVIESVVGSSGNDVVI 281
+GG D+L G +DL N I + + S GN V+
Sbjct: 327 AGGIDILVTAAGEAGLSLFRVDLGPLGLV----LHGNAARIEGGMRDDLLSRSGGNGVLD 382
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G ++ + G D G +G D F I F D
Sbjct: 383 GAEGDDTLSDGPGADTLVGGTGADVFVLRGDGQRDVIADFTLGEDRLD 430
>gi|209526661|ref|ZP_03275185.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209492897|gb|EDZ93228.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 710
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%)
Query: 214 KDSPFIQTIYDSGGDDLL-----------DLTLIGGVKNYIDLNTESWS------SIGGY 256
D I G+D + D + G + N + +S SI
Sbjct: 453 GDDTITNVIAGGSGNDTIVLGTTNDILLSDTANMLGDDSITAANLQFFSEGNEGVSITNL 512
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N TI + +V SGND+++G N+ G+D +G SG + F + +
Sbjct: 513 EGNNTIEGSRGNDLIVTGSGNDLLLGGDGNDTLIGGGGDDTLEGGSGKNILFGGEGNNQF 572
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLR 345
+YR ++ D D +DV+ +
Sbjct: 573 -VYRSLASVTPDDPES---DVFADVDFIT 597
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 35/185 (18%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G + Y + P TI GG+D + + +GG Y D S + G
Sbjct: 6 GPTFLTSGPDQYNQDAPFAPRP--DTILGLGGNDTIFTSTLGGSLVYGDSLVG--SDVSG 61
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ +A+ +D + G N+ + G G DT P+ L
Sbjct: 62 --NDVLVARGP----------DDTLFGGPGNDSLLGRAAGVALVGGDGRDTIVAELPATL 109
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
Y +D L V A + N + +IL + +
Sbjct: 110 Y--------------GGAGRDLLVAV-----AGGNLMFGNQDEDTILGGLQGNDTIYGGK 150
Query: 376 GQDVF 380
G D
Sbjct: 151 GNDRI 155
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 24/215 (11%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
P I+ + +LG + +Y + D + G DD L GG
Sbjct: 22 PFAPRPDTILGLGGNDTIFTSTLGGSLVYGDSLVGSDVSGNDVLVARGPDDTL----FGG 77
Query: 239 VKNYIDLNTESWSSIGGYEKNMTI--------AQHTVIESVVGSSGNDVVIGNSANNVFF 290
N L + ++ G + TI + +V +G +++ GN +
Sbjct: 78 PGNDSLLGRAAGVALVGGDGRDTIVAELPATLYGGAGRDLLVAVAGGNLMFGNQDEDTIL 137
Query: 291 ES-SGNDVFDGSSGLDTFFYYAPSYLYKI-------YRFENAIIVYDANEHKQDFLSDV- 341
GND G G D +Y S + N + D + +
Sbjct: 138 GGLQGNDTIYGGKGNDRIGFYNASGQSNVGLAVPPAVGGANQGNNWVNGNIGNDTIVGIN 197
Query: 342 --ERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ L V V S L + L
Sbjct: 198 RGDSLYGGQDNDFIVGVGSGSYLSGDQGNDTLAAA 232
Score = 44.0 bits (102), Expect = 0.096, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 17/110 (15%)
Query: 244 DLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-- 298
D + + S+I + N ++ A ++++ G GND ++ + F GND
Sbjct: 334 DFLSTNRSNIRTTQGNSSLPGFAGGSILD---GGKGNDTLVSAFLGDSLFGGEGNDSLVG 390
Query: 299 ------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
DG SG +T + I V D + V+
Sbjct: 391 QLFSLMDGGSGNNTLDG---RQWFNTNTIPQEITVSLFGGAGNDLIHAVD 437
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 54/197 (27%), Gaps = 65/197 (32%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKN-----YIDLNTESWSSI-- 253
LG++++ E + ++ D G G++ LD + L + + +
Sbjct: 375 LGDSLFGGEGNDSLVGQLFSLMDGGSGNNTLDGRQWFNTNTIPQEITVSLFGGAGNDLIH 434
Query: 254 ---------GGYEKNMTIAQHTVIESVVGSSGNDVVI----------------------- 281
E + + T+ + G SGND ++
Sbjct: 435 AVDPTREAPDVGEGGLPVGDDTITNVIAGGSGNDTIVLGTTNDILLSDTANMLGDDSITA 494
Query: 282 --------GN--------SANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLY 316
GN NN SGND+ G G DT
Sbjct: 495 ANLQFFSEGNEGVSITNLEGNNTIEGSRGNDLIVTGSGNDLLLGGDGNDTLIGGGGDDTL 554
Query: 317 KIYRFENAIIVYDANEH 333
+ +N + + N
Sbjct: 555 EGGSGKNILFGGEGNNQ 571
>gi|193077932|gb|ABO12833.2| putative calcium binding hemolysin protein [Acinetobacter baumannii
ATCC 17978]
Length = 648
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 56/160 (35%), Gaps = 18/160 (11%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK----FISSNNGYVCTPRYDSRYFM 100
+ + Q+ + S+ LTF T S + + +S +
Sbjct: 503 SPFSQAQQDFMTQVYQKASEFSALTFTLTDNASQLNTVAAYRNSTAATAYAQYPSGAFVG 562
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
D W GT ++ + HE+GHALGL H + G D E D+
Sbjct: 563 SDVAFGPDFWFD--PAGTWVTASYPHELGHALGLRHT--FEGSTISSFSD---EEDTRKW 615
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
SVMSY + M + D+ A+Q IYG
Sbjct: 616 SVMSYDR---TGMSYDGSFAP----FDVAALQAIYGVNSS 648
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G+ N I +++ G++GND + G + ++ + +GND+ G +G D
Sbjct: 198 TINGFASNDIINGLEGNDTLNGNAGNDTLNGGAGDDRLYGGTGNDLTVGGTGNDWLASGG 257
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
Y+ + + + D + ++DV
Sbjct: 258 GDDTYQFSKGDGNDTINDYSGKNTIQITDV 287
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 21/150 (14%)
Query: 203 GNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G++ Y+ + I D D + T + I+ + ++
Sbjct: 258 GDDTYQFSKGDGNDTINDYSGKNTIQITDVSAKD-ITFTTNANNELVINYSATDSITLKA 316
Query: 256 YEKNMTIAQHTVIE----------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
Y N ++ V + G+ D G N+V GND +G G D
Sbjct: 317 YINNYILSDGVVQTYQQFLTGKTATWNGTDNADNFSGTLPNDVITGGKGNDTLNGREGDD 376
Query: 306 TFFYYAPSYLYKI---YRFENAIIVYDANE 332
T+ + + I Y N I+ D
Sbjct: 377 TYRFSLGDGIDTINGDYSGNNTIVFTDVKS 406
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 27/66 (40%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ ++ ++ ++G ++ + +GND G G D + + + K+ + +
Sbjct: 76 ISTANSEWIVGTNSVDQISSGAGNDRLFGGVGDDIYQFSKGDGIDKVTDYSGNNTIQFMA 135
Query: 332 EHKQDF 337
+ D
Sbjct: 136 SNLADL 141
>gi|31543257|ref|NP_035976.3| matrix metalloproteinase-17 precursor [Mus musculus]
gi|30354087|gb|AAH51917.1| Matrix metallopeptidase 17 [Mus musculus]
gi|148687566|gb|EDL19513.1| matrix metallopeptidase 17 [Mus musculus]
Length = 578
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 32 PDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIHS-DIKFIS 83
P + LS+ + +P ++ R +AL WS + L F E + ++ DI+
Sbjct: 129 PTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNAADIQIDF 188
Query: 84 S----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALHE 127
S N+GY + + +FD + W + G L A+HE
Sbjct: 189 SKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEPWTFRSSDAHGMDLFAVAVHE 248
Query: 128 IGHALGLMH 136
GHA+GL H
Sbjct: 249 FGHAIGLSH 257
>gi|21624137|dbj|BAA82708.2| membrane-type-4 matrix metalloproteinase [Mus musculus]
Length = 578
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 32 PDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIHS-DIKFIS 83
P + LS+ + +P ++ R +AL WS + L F E + ++ DI+
Sbjct: 129 PTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNAADIQIDF 188
Query: 84 S----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALHE 127
S N+GY + + +FD + W + G L A+HE
Sbjct: 189 SKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEPWTFRSSDAHGMDLFAVAVHE 248
Query: 128 IGHALGLMH 136
GHA+GL H
Sbjct: 249 FGHAIGLSH 257
>gi|163742303|ref|ZP_02149690.1| Hemolysin-type calcium-binding region, RTX [Phaeobacter
gallaeciensis 2.10]
gi|161384253|gb|EDQ08635.1| Hemolysin-type calcium-binding region, RTX [Phaeobacter
gallaeciensis 2.10]
Length = 307
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 61/204 (29%), Gaps = 26/204 (12%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS----- 252
Y + T+ G+D L L V L S +
Sbjct: 115 NDNVTAIRTYAGGDRISLGAGDDTVAAGAGNDFLTGGLGADV-----LRGGSGADTLHGN 169
Query: 253 -----IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G I + + G GND +IG S ++ +G D G +G D
Sbjct: 170 GGDDVLRGGVGRDVIFGGVGADLLGGGRGNDRLIGGSGSDTIRGGAGVDRLYGGTGNDVM 229
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE---- 363
+ ++ D + DF V+R++ +V + +
Sbjct: 230 TGGDEADIFVFNEG-------DHTDRITDFEVGVDRIKLGRGAESMDDVDFAQVGDDAAI 282
Query: 364 YTASYEDLIQVIGQDVFESMKHFY 387
Y A+ L++ +S HF
Sbjct: 283 YFANVTILVEDTAFSELQSADHFL 306
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 44/160 (27%), Gaps = 19/160 (11%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L+ G L ++ ++I Y I+ ++V +GND + G +V SG
Sbjct: 103 LLSGDDQITALLNDNVTAIRTYAGGDRISLGAGDDTVAAGAGNDFLTGGLGADVLRGGSG 162
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D G+ G D F D L
Sbjct: 163 ADTLHGNGGDDVLRGGVGRD----VIFGGVGADLLGGGRGNDRLIG-------------- 204
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ A + L G DV F +EG
Sbjct: 205 -GSGSDTIRGGAGVDRLYGGTGNDVMTGGDEADIFVFNEG 243
>gi|83648752|ref|YP_437187.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83636795|gb|ABC32762.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 1361
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 69/209 (33%), Gaps = 25/209 (11%)
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
++ D++ Q + GN++ Y + + GG+D
Sbjct: 911 TAMLLQDLLKEQSEVKIAGLTEGNDVAYGTNERNRMEGL-------GGND---------- 953
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I + + G + T+ + + G GND + G ++V +G+DV
Sbjct: 954 ---ILIGEGGDDELLGGAGDDTLNGGLGDDRLEGGEGNDRLEGKEGDDVLLGGAGDDVLV 1010
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G G D A + + R A + QD + + + + ++
Sbjct: 1011 GGMGADVLHGGAGNDVLNGER--GADVFEFNLGDGQDLIHNYDDDHSLVNRLKLGAGIKK 1068
Query: 360 SILEYTASYEDLIQVIGQD--VFESMKHF 386
L +T EDL+ IG H+
Sbjct: 1069 EDLSFTRHGEDLVITIGTGGEQVTMKNHY 1097
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + + GG+D+L GG L ++ G + +
Sbjct: 733 DTVYGTHERNRMEGL-------GGNDIL--MAQGGDDEL--LGGAGDDTLKGELGDDRLE 781
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +G+DV++G + ++V G DV G +G D + +++ +
Sbjct: 782 GGEGNDRLEGGNGDDVLLGGAGDDVLVGGMGADVLHGGAGNDVLNGERGADVFEFNLGDG 841
Query: 324 AIIVYDANEH 333
++++ ++
Sbjct: 842 QDLIHNYDDD 851
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 23/164 (14%)
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
++ D++ Q + GN++ Y + + GG+D
Sbjct: 1113 TAMLLQDLLKEQSEVKIAGLTEGNDVAYGTNERNRMEGL-------GGND---------- 1155
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I + + G + T+ + + G GND + G ++V +G+DV
Sbjct: 1156 ---ILIGEGGDDELLGGAGDDTLNGGLGDDRLEGGEGNDRLEGKEGDDVLLGGAGDDVLV 1212
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G G D A + + R A + QD + + +
Sbjct: 1213 GGMGADILHGGAGNDVLNGER--GADVFEFNLGDGQDQIHNYDD 1254
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 233 LTLIGGVKNYIDLNTESWSSIG---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + D + S G N + + ++G G+D+++G +V
Sbjct: 555 FSGDISNLSDADTTEKGDSGFNILIGLAGNDRLEGGNGDDVLLGGDGDDMLVGGLGADVL 614
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+GNDV +G G D F + I+ +++ + + + E L F
Sbjct: 615 HGGAGNDVLNGERGADVFEFNLGDGQDLIHNYDDDHSLVNRLKLGAGIKK--EDLSFT 670
>gi|124024797|ref|YP_001013913.1| hypothetical protein NATL1_00841 [Prochlorococcus marinus str.
NATL1A]
gi|123959865|gb|ABM74648.1| Hypothetical protein NATL1_00841 [Prochlorococcus marinus str.
NATL1A]
Length = 1584
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN---E 332
G+D + G +++ F G+D DG G D FY YK R ++ + + D
Sbjct: 1318 GDDRLEGGESSDKIFGGLGSDFIDGGEGEDIAFYAGNFEDYKFDRTKDTVSLEDQREGLN 1377
Query: 333 HKQDFLSDVERLRFADQCID 352
D L +VE ++FADQ +D
Sbjct: 1378 DGNDVLKNVEYIQFADQKVD 1397
>gi|116249593|ref|YP_765431.1| putative calcium-binding hemolysin-like protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|115254241|emb|CAK03856.1| unnamed protein product [Rhizobium leguminosarum bv. viciae 3841]
Length = 777
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 87/271 (32%), Gaps = 27/271 (9%)
Query: 134 LMHPGSYNGGYPVY-----------GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
L H G NGG + G D + SY ++ + +
Sbjct: 472 LPHTGQSNGGNETFKGLGGSDVLKGGAGADVLDGGTGNDTASYAGSTAVNVNLATKAASG 531
Query: 183 PMV--SDIVAVQKIYGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
I +V+ + G+ G N + G D+++
Sbjct: 532 GQATGDKIASVENLTGSSYNDVLTGGN--GGSNVLNGGAGADKLSGGAGGDVINGGADND 589
Query: 239 VKNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
Y +++N + ++ GG+ IE+V GSS NDV+ GNS +NV +
Sbjct: 590 TAGYAGSGAVNVNLATGAASGGHATGDKF---VSIENVTGSSYNDVLTGNSGSNVLDGGA 646
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRFADQCID 352
G D +G G D A + + + + + D + D D+ +
Sbjct: 647 GADKLNGGLGNDKLIGKAGADILTGGGGGDTFVFNMKPDNISVDHIRDFSS-AAGDKLML 705
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ L + ++ + + +
Sbjct: 706 DHSIFAALSLSGFSDENFVLGTKALEADDKL 736
>gi|326329348|ref|ZP_08195673.1| type I secretion target repeat protein [Nocardioidaceae bacterium
Broad-1]
gi|325952923|gb|EGD44938.1| type I secretion target repeat protein [Nocardioidaceae bacterium
Broad-1]
Length = 546
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 5/183 (2%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G IY +GG D D+ G + I+ + + G ++ +
Sbjct: 84 GAEIYGGAGNDTLIGGSDGDLLNGG-DGDDVARAGEGDDLIEETSGNDVLAGDAGGDIVL 142
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + + V G G+DV+ G S +V G D G +G D+ A +
Sbjct: 143 A-GSGSDEVDGGVGDDVISGGSEGDVLRGGDGADRIAGGAGDDSIDGGAGTDKATYAESA 201
Query: 323 NAIIVYD---ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ I+ D L+ +E L D SI++ A + G D+
Sbjct: 202 SGIVATTTKVTGGLGTDTLAGIEELTGTDYADRFTGGSGNSIIDGRAGNDWFAPGAGTDL 261
Query: 380 FES 382
Sbjct: 262 ITG 264
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 62/209 (29%), Gaps = 21/209 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ + T+ G D + I L T + G
Sbjct: 343 GGTGNDTF------WPGKDNDTVIGGSGTDTISYKGY-YRPIQISLATTRAQNTGSSGYE 395
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI- 318
+ E+++G+S +D + GNS N GND G D A S
Sbjct: 396 TV----SQTENIIGTSYSDRLAGNSGRNTITAGYGNDTVLPGHGDDVVSGGAGSDTISYR 451
Query: 319 -----YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
R A D ++ VE + + + L A + L
Sbjct: 452 NVGVGVRVSLAATSRQRTNAGYDKITYVENVIGTTRADVLKGNGSANRLYGDAGGDKLYG 511
Query: 374 VIGQDV--FESMKHFYEFGLSEGRDITFD 400
G D + + + G GRD ++
Sbjct: 512 SGGADKLYGGTGSDYGDGGT--GRDSSYS 538
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 56/187 (29%), Gaps = 15/187 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ I GDD +D Y + + ++ + IE + G
Sbjct: 169 RGGDGADRIAGGAGDDSIDGGAGTDKATYAESASGIVATTTKVTGGLGTDTLAGIEELTG 228
Query: 274 SSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ D G S N++ +GN D+ G SG+DT Y + +IY + A
Sbjct: 229 TDYADRFTGGSGNSIIDGRAGNDWFAPGAGTDLITGGSGVDTVSYANLTSGVRIYLGQPA 288
Query: 325 IIVYDANEHKQDFLSD------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A + + + + L + + + L G D
Sbjct: 289 YYGAGAGRETIEEVENLTGSPYADNLVGDLGGNVILGGGGSDYINGLNGNDRLDGGTGND 348
Query: 379 VFESMKH 385
F K
Sbjct: 349 TFWPGKD 355
Score = 44.7 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 10/126 (7%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I ++++G S D++ G ++V G+D+ + +SG D A
Sbjct: 81 GQGGAEIYGGAGNDTLIGGSDGDLLNGGDGDDVARAGEGDDLIEETSGNDVLAGDA---- 136
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I++ + + D + + + + A + +
Sbjct: 137 ------GGDIVLAGSGSDEVDGGVGDDVISGGSEGDVLRGGDGADRIAGGAGDDSIDGGA 190
Query: 376 GQDVFE 381
G D
Sbjct: 191 GTDKAT 196
Score = 40.1 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 12/114 (10%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE---SVVGSSGNDVVI 281
G DL+ +Y +L + +G A IE ++ GS D ++
Sbjct: 256 GAGTDLITGGSGVDTVSYANLTSGVRIYLGQPAYYGAGAGRETIEEVENLTGSPYADNLV 315
Query: 282 GN---------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G+ ++ +GND DG +G DTF+ + + I
Sbjct: 316 GDLGGNVILGGGGSDYINGLNGNDRLDGGTGNDTFWPGKDNDTVIGGSGTDTIS 369
>gi|323492224|ref|ZP_08097382.1| hypothetical protein VIBR0546_03560 [Vibrio brasiliensis LMG 20546]
gi|323313537|gb|EGA66643.1| hypothetical protein VIBR0546_03560 [Vibrio brasiliensis LMG 20546]
Length = 4174
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G SGND+++G + N+ +G+D +G G DT + S + + +
Sbjct: 4012 TLTGGSGNDLLVGGAGNDTLIGGAGDDHLEGGDGDDTLYGGLGSDILVGGTGMDTFVWDH 4071
Query: 330 ANEHKQDFLSDVER 343
++ D + D +
Sbjct: 4072 IDDGSLDTIKDFQV 4085
>gi|126642451|ref|YP_001085435.1| putative calcium binding hemolysin protein [Acinetobacter baumannii
ATCC 17978]
Length = 594
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 56/160 (35%), Gaps = 18/160 (11%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK----FISSNNGYVCTPRYDSRYFM 100
+ + Q+ + S+ LTF T S + + +S +
Sbjct: 449 SPFSQAQQDFMTQVYQKASEFSALTFTLTDNASQLNTVAAYRNSTAATAYAQYPSGAFVG 508
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
D W GT ++ + HE+GHALGL H + G D E D+
Sbjct: 509 SDVAFGPDFWFD--PAGTWVTASYPHELGHALGLRHT--FEGSTISSFSD---EEDTRKW 561
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
SVMSY + M + D+ A+Q IYG
Sbjct: 562 SVMSYDR---TGMSYDGSFAP----FDVAALQAIYGVNSS 594
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G+ N I +++ G++GND + G + ++ + +GND+ G +G D
Sbjct: 144 TINGFASNDIINGLEGNDTLNGNAGNDTLNGGAGDDRLYGGTGNDLTVGGTGNDWLASGG 203
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
Y+ + + + D + ++DV
Sbjct: 204 GDDTYQFSKGDGNDTINDYSGKNTIQITDV 233
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 21/150 (14%)
Query: 203 GNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G++ Y+ + I D D + T + I+ + ++
Sbjct: 204 GDDTYQFSKGDGNDTINDYSGKNTIQITDVSAKD-ITFTTNANNELVINYSATDSITLKA 262
Query: 256 YEKNMTIAQHTVIE----------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
Y N ++ V + G+ D G N+V GND +G G D
Sbjct: 263 YINNYILSDGVVQTYQQFLTGKTATWNGTDNADNFSGTLPNDVITGGKGNDTLNGREGDD 322
Query: 306 TFFYYAPSYLYKI---YRFENAIIVYDANE 332
T+ + + I Y N I+ D
Sbjct: 323 TYRFSLGDGIDTINGDYSGNNTIVFTDVKS 352
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 27/66 (40%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ ++ ++ ++G ++ + +GND G G D + + + K+ + +
Sbjct: 22 ISTANSEWIVGTNSVDQISSGAGNDRLFGGVGDDIYQFSKGDGIDKVTDYSGNNTIQFMA 81
Query: 332 EHKQDF 337
+ D
Sbjct: 82 SNLADL 87
>gi|17228898|ref|NP_485446.1| hypothetical protein alr1403 [Nostoc sp. PCC 7120]
gi|17130750|dbj|BAB73360.1| alr1403 [Nostoc sp. PCC 7120]
Length = 556
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 50/159 (31%), Gaps = 21/159 (13%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G D + + I+ S+ + G N + + V G GND++ G
Sbjct: 290 NDGTDTIRGVEV------INFRQGGSYGVVTGTTGNDVLTASNMWSFVFGGGGNDIITGG 343
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSY---------LYKIYRFENAIIV-----YD 329
+ N+ S+GND G +G DT A Y I N +
Sbjct: 344 TGNDTLDGSTGNDTLIGGAGNDTLIGGAGVDTAVYAGNYADYGISFLSNGDLQVIDKNLT 403
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D L VE + F V TAS
Sbjct: 404 NGNDGTDILKGVEVINFTQGGSYGVVTGTTGNNVLTASN 442
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 37/112 (33%), Gaps = 5/112 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G SGND++ G + N+ GND DG G DT Y Y I
Sbjct: 215 ITGTNYADILQGGSGNDILKGGAGNDELSGKGGNDTLDGGFGYDTVVYDGNYADYGISFL 274
Query: 322 ENAIIV-----YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
N + D + VE + F V TAS
Sbjct: 275 SNGDLQVIDKNLTNGNDGTDTIRGVEVINFRQGGSYGVVTGTTGNDVLTASN 326
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+ + G N + + V G +GND + G + N+ G D G G D F
Sbjct: 424 GSYGVVTGTTGNNVLTASNMWSFVFGGNGNDTITGGTGNDTLVGGLGADTLTGGLGADKF 483
Query: 308 FYYAPSYLYKI 318
+ + S +
Sbjct: 484 VFNSLSEGIDV 494
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 5/96 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY----KIYRFENAIIVY 328
G GNDV+ G + N+ +GND DG +G D
Sbjct: 113 GGVGNDVLKGGAGNDELSGGAGNDTLDGGTGFDILKGGDGDDTLIDTEGNIDGGAGTDTL 172
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
A+ + D + V + + Q + IL Y
Sbjct: 173 RADYSRYDNGAGV-HVGYLGQAQIFSRLTGTGILGY 207
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 13/140 (9%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-------DGSSGLDTFF 308
+ + + +++ G G D + G + ++ G+D DG +G DT
Sbjct: 1 MGGDDILTGGSQNDTIEGGEGKDTINGGAGFDILKGGDGDDTLIDTEGNIDGGAGTDTLR 60
Query: 309 YYAPSYL----YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK--QRSIL 362
Y + A I S++E+ + +L
Sbjct: 61 ADYSKYDNGAGVHVGYLGQAQIFSRQTGTGILGYSNIEKFEITGTKYADILQGGVGNDVL 120
Query: 363 EYTASYEDLIQVIGQDVFES 382
+ A ++L G D +
Sbjct: 121 KGGAGNDELSGGAGNDTLDG 140
>gi|21542428|sp|Q9R0S3|MMP17_MOUSE RecName: Full=Matrix metalloproteinase-17; Short=MMP-17; AltName:
Full=Membrane-type matrix metalloproteinase 4;
Short=MT-MMP 4; Short=MTMMP4; AltName:
Full=Membrane-type-4 matrix metalloproteinase;
Short=MT4-MMP; Short=MT4MMP; Flags: Precursor
gi|8052272|emb|CAB92315.1| membrane-type-4 matrix metalloproteinase [Mus musculus]
Length = 578
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 32 PDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIHS-DIKFIS 83
P + LS+ + +P ++ R +AL WS + L F E + ++ DI+
Sbjct: 129 PTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNAADIQIDF 188
Query: 84 S----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALHE 127
S N+GY + + +FD + W + G L A+HE
Sbjct: 189 SKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEPWTFRSSDAHGMDLFAVAVHE 248
Query: 128 IGHALGLMH 136
GHA+GL H
Sbjct: 249 FGHAIGLSH 257
>gi|119489543|ref|ZP_01622304.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
gi|119454622|gb|EAW35769.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
Length = 801
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 20/169 (11%)
Query: 226 GGDDLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GG+D + + +I +L+ + I G + + T+ I++++G SGND + G
Sbjct: 43 GGNDTVQGS---SDPEFIRGNLDNDL---IRGGDGDDTLLGGQGIDNLLGESGNDSIFGE 96
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N++ F + G D F G G D + ++ F + + D +
Sbjct: 97 RDNDILFGNLGEDTFFGGQGNDEANGGQGNDVF----FGGEGVDTLNGDSGDDLIQG--- 149
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
+ I+ A + + G+D E F G
Sbjct: 150 ---EKGTDILLGGLGNDIILGGADADRISGEAGEDVIRGEQDSDFLVGG 195
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 70/212 (33%), Gaps = 24/212 (11%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLD--------------LTLIGGVKNY 242
G+LG + + + + + G D L+ L+GG+ N
Sbjct: 104 GNLGEDTFFGGQGNDEANGGQGNDVFFGGEGVDTLNGDSGDDLIQGEKGTDILLGGLGND 163
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I L I G I + +VG ND+++G + ++ +G+D G
Sbjct: 164 IILGGADADRISGEAGEDVIRGEQDSDFLVGGEDNDLILGGTGDDRVLGEAGDDRLYGDK 223
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSDVERLRFADQCIDSVNVK 357
G DT + ++ I DAN + D ++ V F I
Sbjct: 224 GRDTLIGGEGNDIFFIEPGTGGNSPEDANFIFDFQLGIDTIALVGDFPFNSLNITEDPRD 283
Query: 358 QRSILEYTAS--YEDLIQVIGQDVFESMKHFY 387
+ L A+ Y +IQ + D F
Sbjct: 284 SNNTLIQAANGEYLAVIQRVQPDRLTRSDFFI 315
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 7/133 (5%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ + E + G+ ND++ G ++ G D G SG D+ F + +
Sbjct: 42 LGGNDTVQGSSDPEFIRGNLDNDLIRGGDGDDTLLGGQGIDNLLGESGNDSIFGERDNDI 101
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED-LI 372
F N D + + + F + +D++N L D L+
Sbjct: 102 L----FGNLGEDTFFGGQGNDEANGGQGNDVFFGGEGVDTLNGDSGDDLIQGEKGTDILL 157
Query: 373 QVIGQDVFESMKH 385
+G D+
Sbjct: 158 GGLGNDIILGGAD 170
>gi|188619|gb|AAA36321.1| matrix metalloproteinase-3 [Homo sapiens]
gi|260509|gb|AAA00036.1| prostromelysin=matrix metalloproteinase [human, Peptide, 477 aa]
gi|1688259|gb|AAB36942.1| stromelysin [Homo sapiens]
gi|46854935|gb|AAH69676.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|46854939|gb|AAH69716.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|50960755|gb|AAH74869.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|62898127|dbj|BAD97003.1| matrix metalloproteinase 3 preproprotein variant [Homo sapiens]
gi|62898143|dbj|BAD97011.1| matrix metalloproteinase 3 preproprotein variant [Homo sapiens]
gi|76780106|gb|AAI05955.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|77567902|gb|AAI07491.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|312150808|gb|ADQ31916.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [synthetic
construct]
Length = 477
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 52/190 (27%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 221 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 256
Query: 189 VAVQKIYGAP 198
+Q +YG P
Sbjct: 257 NGIQSLYGPP 266
>gi|300864166|ref|ZP_07109058.1| hypothetical protein OSCI_660002 [Oscillatoria sp. PCC 6506]
gi|300337834|emb|CBN54204.1| hypothetical protein OSCI_660002 [Oscillatoria sp. PCC 6506]
Length = 454
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
Query: 232 DLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ + G ++ + L + + G +N + + ++++G +GND + GN ++
Sbjct: 280 NFSFSGLLQQIQVALAPSQANYLVGDAQNNSASAGGGDDTLIGGNGNDTLRGNQGDDTIS 339
Query: 291 ESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+GND G G+DT F + + A D + D E
Sbjct: 340 GGNGNDFLYGGKGIDTISGGEGADFISGDAGDDILIGGSGQDRFVLAPFAGIDTIVDFED 399
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GGDD L IGG N ++ G + + TI+ + + G G D + G
Sbjct: 314 GGGDDTL----IGGNGND---------TLRGNQGDDTISGGNGNDFLYGGKGIDTISGGE 360
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +G+D+ G SG D F + + I FE++
Sbjct: 361 GADFISGDAGDDILIGGSGQDRFVLAPFAGIDTIVDFEDS 400
>gi|221103675|ref|XP_002158607.1| PREDICTED: similar to matrix metalloproteinase [Hydra
magnipapillata]
Length = 484
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 83/232 (35%), Gaps = 28/232 (12%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR-WALGEWSKVVDLTFEETSIH- 76
R++ ++ +K + LT L+ + L E A W V +L F + I+
Sbjct: 99 RNRRYTLQGTTWKKNELTWKLLNNNNDGLTRGEIETTLHKAFSMWEAVTNLKFRQLQINE 158
Query: 77 ---SDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
+DI+ + P + +++FD A+ + +G
Sbjct: 159 NKKADIEIKFAQGYHDDPYSFDGFGGTLAHAFYPHTNEGLSGDVHFDDAEKFTIESPEGR 218
Query: 119 ILSHNALHEIGHALGLMHPGSYNG-GYPVYGVD---NDYENDSFLTSVMSYFMPQDSMMD 174
L A+HEIGH++GL H +P Y V N +D + + S + + S+M
Sbjct: 219 SLLWVAVHEIGHSIGLEHSNVKEALMFPWYRVQDVRNIQLSDDDVLGIQSIYGSKKSIML 278
Query: 175 ASFGYCATPMVSDIVA----VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
S M + + K G + YKI K + T+
Sbjct: 279 PSTVTPTKNMKNSFQMKAVILDKSTGVTYAFNDDEFYKINNDLKKTEGPFTV 330
>gi|209549153|ref|YP_002281070.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534909|gb|ACI54844.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 677
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 63/201 (31%), Gaps = 27/201 (13%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ GN + K + G+D + G ++L T+ S GG
Sbjct: 448 SNGGNETFKGLGGSDVLKGGAGADALDGGTGNDT--ASYAGSGAVNVNLATKVAS--GGD 503
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
IA IE++ GSS NDV+ G N NV +G D DG +G D + +
Sbjct: 504 ATGDKIAS---IENLTGSSYNDVLTGGNGGGNVLTGGAGADKLDGGAGNDVLIGGSGKDI 560
Query: 316 YKIYRFENAIIVYDANEHK--------QDFLSDVERLRFA--DQCIDSVNVKQRSILEYT 365
E+ I+ E DF ++++ + D +
Sbjct: 561 MTGGTGEDKFILKAPTETGSGLNRDVITDFQHGIDKIDLSAIDANGSAAGNGTFHFQ--- 617
Query: 366 ASYEDLIQVIGQDVFESMKHF 386
+ H+
Sbjct: 618 ---AQENALFDHKAGALAWHY 635
>gi|45768662|gb|AAH67523.1| Matrix metallopeptidase 13 (collagenase 3) [Homo sapiens]
Length = 471
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 57/193 (29%), Gaps = 47/193 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSDVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GH+LGL H + + +Y M+
Sbjct: 221 AHEFGHSLGLDHSKDPGA---------------LMFPIYTYTGKSHFMLP---------- 255
Query: 185 VSDIVAVQKIYGA 197
D+ +Q +YG
Sbjct: 256 DDDVQGIQSLYGP 268
>gi|56681792|gb|AAW21432.1| leukotoxin A [Pasteurellaceae bacterium I4]
Length = 394
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 232 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 291
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 292 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 328
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 220 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---ILDGGNGDDF 276
Query: 328 YDANEHKQDFLSD 340
D D L
Sbjct: 277 IDGG-KGNDLLHG 288
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 6/114 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 218 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDILDGGNG 273
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+D + G N++ G+D+F G D + + +
Sbjct: 274 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDLTF 327
>gi|58176639|pdb|1ROS|A Chain A, Crystal Structure Of Mmp-12 Complexed To 2-(1,3-Dioxo-1,3-
Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
gi|58176640|pdb|1ROS|B Chain B, Crystal Structure Of Mmp-12 Complexed To 2-(1,3-Dioxo-1,3-
Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
Length = 163
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 4 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 56
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 57 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 115
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 116 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 149
Query: 188 IVAVQKIYGAPKGS 201
I +Q +YG PK +
Sbjct: 150 IRGIQSLYGDPKEN 163
>gi|332186531|ref|ZP_08388275.1| cadherin domain protein [Sphingomonas sp. S17]
gi|332013514|gb|EGI55575.1| cadherin domain protein [Sphingomonas sp. S17]
Length = 1133
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 9/154 (5%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y P +N+Y + V D+ G D+ L++ I +S
Sbjct: 912 YENPTDLNHDNVYDLTVIATDAK--------GAVDMQTLSIGVTDVVGITKTGTIFSDTI 963
Query: 255 GYEKNMTIAQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + + + G GND +IG N+ G+DV G G D A
Sbjct: 964 NGTGEQDLLDGSWGNDVLNGLGGNDKLIGGWGNDTLNGGDGDDVLIGGMGKDILTGGAGK 1023
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+++ + + + DF S +++ +
Sbjct: 1024 DIFRFETASESSTLSSLRDVITDFQSGEDKIDLS 1057
>gi|302383520|ref|YP_003819343.1| hypothetical protein Bresu_2411 [Brevundimonas subvibrioides ATCC
15264]
gi|302194148|gb|ADL01720.1| hypothetical protein Bresu_2411 [Brevundimonas subvibrioides ATCC
15264]
Length = 859
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 106/271 (39%), Gaps = 27/271 (9%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG-IGKGTILSHNALHEIGH 130
E + D S G Y + Y + N ++ + G G ++ +
Sbjct: 472 EVTDAGDTVMEISGEGSDVVFSYVNGYTLTANVEQLRLVGGALTGSGNAGANVLV----- 526
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTS-----VMSYFMPQDSMMDASFGYCATPMV 185
GL + S G + ND++ + V D F Y +
Sbjct: 527 GNGLDNTLSGGAGNDTFYGGA--GNDTYEVTETGDVV---IENPGEGTDTIFSYVTYTLG 581
Query: 186 SDIVAVQKIYGAPKGS---LGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGV- 239
+++ ++ + GA + LGN I + T+ SGG+D+ ++T +G V
Sbjct: 582 ANVENLRLVGGALNATGNGLGNQIVGNALSNVLIGGGGNDTMVGSGGNDVYEVTEVGDVV 641
Query: 240 -KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV---GSSGNDVVIGNSANNVFFESSGN 295
+ + +S I Y+ ++ + ++ + GS+GND ++GN+ +N + GN
Sbjct: 642 YEAAAEGTDTVYSYIDTYQMSLNVETLNLVGTARVGLGSAGNDTIVGNAQDNTLNGNGGN 701
Query: 296 DVFDGSSGLDTFF-YYAPSYLYKIYRFENAI 325
D+ G +G+D F+ A + +I F A
Sbjct: 702 DILTGGTGVDQFWHLGASAGQDRITDFAAAA 732
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 31/205 (15%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D ++T G I + S + Y T+ + E + G GN
Sbjct: 465 GNGNDTYEVTDAGDTVMEI---SGEGSDVVFSYVNGYTLTANV--EQLRLVGGALTGSGN 519
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----- 338
+ NV + ++ G +G DTF+ A + Y++ E +V + D +
Sbjct: 520 AGANVLVGNGLDNTLSGGAGNDTFYGGAGNDTYEVT--ETGDVVIENPGEGTDTIFSYVT 577
Query: 339 ----SDVERLRFADQCIDSVNVKQRSILEYTA---------SYEDLIQVIGQD--VFESM 383
++VE LR +++ + + A + ++ G D +
Sbjct: 578 YTLGANVENLRLVGGALNATGNGLGNQIVGNALSNVLIGGGGNDTMVGSGGNDVYEVTEV 637
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+EG D + Y+ +Y
Sbjct: 638 GDVVYEAAAEGTDTVYS---YIDTY 659
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 30/217 (13%)
Query: 235 LIGGVKNYIDLNTESWSSI----------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G DL +++ G N ++ + ++G +G+D + G +
Sbjct: 380 TLSGTALDDDLIGTAFADTLLLGRGNDLGAGGSGNDSLYGEGGRDILLGGAGDDYLAGGA 439
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--------HKQD 336
+ + ND G +G D + Y++ + ++ +
Sbjct: 440 DIDALYGDLDNDFLIGGAGNDYMAGGNGNDTYEVTDAGDTVMEISGEGSDVVFSYVNGYT 499
Query: 337 FLSDVERLRFADQCID---------SVNVKQRSILEYTASYEDLIQVIGQD--VFESMKH 385
++VE+LR + V + L A + G D
Sbjct: 500 LTANVEQLRLVGGALTGSGNAGANVLVGNGLDNTLSGGAGNDTFYGGAGNDTYEVTETGD 559
Query: 386 FYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGA 421
EG D F Y LG+ + + G A
Sbjct: 560 VVIENPGEGTDTIFSYVTYTLGANVENLRLVGGALNA 596
Score = 44.7 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
E +T++ + + ++G++ D ++ N++ SGND G G D A
Sbjct: 372 YDPRESGITLSGTALDDDLIGTAFADTLLLGRGNDLGAGGSGNDSLYGEGGRDILLGGAG 431
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
Y A I + DFL
Sbjct: 432 DD----YLAGGADIDALYGDLDNDFLIG 455
>gi|255958997|gb|ACU43586.1| RTX-I toxin determinant A [Actinobacillus pleuropneumoniae]
Length = 1022
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 31/256 (12%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + I+ G+D L G I ++ + G + +
Sbjct: 743 DDEIYGNDGHDILYGDDGNDVIHGGDGNDHL--VGGNGNDRLIGGKGNNFLNGGDGDDEL 800
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + ++G +GND++ G+ N+F GND G G D + Y + I
Sbjct: 801 QVFEGQYN-VLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEYGRHIIIE 859
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ DV +R D + + + L Y Y
Sbjct: 860 KGGDDDTLLLSDLS---FKDVGFIRIGDDLLVNKRIGGT--LYYHEDY--------NGNA 906
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++K +++ G EG + + + D Y+T GR + F
Sbjct: 907 LTIKDWFKEG-KEG------------QNNKIEKIVDKDGAYVLSQYLTELTAPGRGINYF 953
Query: 441 KALEYIASHEDLINAF 456
LE + + NA
Sbjct: 954 NGLEEKLYYGEGYNAL 969
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D + GN +++ + GNDV G G D + + N +
Sbjct: 735 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 794
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D ++ Q F L ++ + + + +G+D+
Sbjct: 795 DGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDI 845
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GNDV+ G N+ +GND G G +
Sbjct: 737 FHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGDG 796
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+++ + +++ A + I Y+ Y
Sbjct: 797 DDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEY 852
>gi|190895160|ref|YP_001985453.1| putative hemolysin-type calcium binding protein [Rhizobium etli CIAT
652]
gi|190700821|gb|ACE94903.1| putative hemolysin-type calcium binding protein [Rhizobium etli CIAT
652]
Length = 2218
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 18/182 (9%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
T+ G+D+ + IG ++ +I + ++A +E+
Sbjct: 1618 DTLDGGAGADTLSGGAGNDIYVVDNIG--DVVVEAAGAGTDTIKTTLNSYSLASLANVEN 1675
Query: 271 V-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ +G+ GN+A NV +GNDV DG +G DT A + +Y + + +V +
Sbjct: 1676 LTFTGTGDFTGSGNAAVNVITGGAGNDVLDGGAGADTLVGGAGNDIYIVDNAGD--VVTE 1733
Query: 330 ANEHKQDF------------LSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIG 376
A D L++VE L + +++ + + L G
Sbjct: 1734 AASAGTDTIETALASYSLAALANVENLTYTGTAAFTGTGNTLANVITGGSGNDTLDGGAG 1793
Query: 377 QD 378
D
Sbjct: 1794 AD 1795
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 70/224 (31%), Gaps = 40/224 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD--LTLIGGVKNYIDLNTESWSSIGGYE 257
G GN+IY ++ + GG D++ L N +L S+ G
Sbjct: 1977 GGAGNDIYIVDDAGD----VVVEVAGGGTDIVKTVLASYTLGANVENLTYTGSSAFAGT- 2031
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+++ + G +A + +GND DG +G DT Y
Sbjct: 2032 -------GNELDNA--------ITGGAAADTLSGGAGNDTLDGGAGADTLIGGTGDDTYI 2076
Query: 318 IYRFENAIIVYDANEHKQDFLS----------DVERLRFADQ-CIDSVNVKQRSILEYTA 366
+ + IV + D + +VE L + +++
Sbjct: 2077 VDNAGD--IVSENAGEGTDTVKTSLTSYTLGANVENLTYTGTAAFTGTGNGLDNVITGGT 2134
Query: 367 SYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ L +G D + ++ + EG D L SY
Sbjct: 2135 GADHLAGGLGNDTYIVDNAGDIVTENVGEGTDTV---RTSLASY 2175
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 2/178 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ F + SG + ++Y+ T + + G N ++ T
Sbjct: 1457 GRTPTTSEASFWTSALGSGTTKADFAVALAVNQSYLSSTTGNGIDVVGTAGNDSLTGGTG 1516
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G++GND+++ + N+ +G D G +G DT+ + E V
Sbjct: 1517 DDTIDGAAGNDLILAFAGNDTIVGGAGADTMIGGTGDDTYVVDNAGDVVTENAGEGNDTV 1576
Query: 328 YDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A ++VE L + + + + + L G D
Sbjct: 1577 KTALA-AYTLGANVENLVYTGTAAFAGTGNELANAITGGVGADTLDGGAGADTLSGGA 1633
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/316 (14%), Positives = 95/316 (30%), Gaps = 20/316 (6%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+L + V +LTF T F S N V + + AD G G
Sbjct: 1666 SLASLANVENLTFTGTGD-----FTGSGNAAVNVITGGAGNDVLDGGAGADTLVGGAGND 1720
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS-VMSYFMPQDSMMDAS 176
+ NA + A + Y + ++ + ++ +++ +
Sbjct: 1721 IYIVDNAGDVVTEAASAG-TDTIETALASYSLAALANVENLTYTGTAAFTGTGNTLANVI 1779
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
G + + G G++ Y ++ + T G D + L
Sbjct: 1780 TGGSGNDTLDGGAGADTLIG----GTGDDTYIVDNAGD----VVTENAGEGTDTVKTALA 1831
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN-DVVIGNSANNVFFESSGN 295
N E+ G + +++++ N D + G + N++ +G
Sbjct: 1832 SYTLAA---NVENLVYTGTGTSAIFSGTGNALDNIITGGANADTLSGGAGNDMLDGGAGA 1888
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRFADQCIDSV 354
D G +G DT+ S + E + + + L +VE L + +
Sbjct: 1889 DHLVGGTGDDTYVVDNASDVITENAGEGTDTIRTNLATYSLAALGNVENLTYTGTAAFTG 1948
Query: 355 NVKQRSILEYTASYED 370
+ + D
Sbjct: 1949 TGNAAANAIIGGAGND 1964
Score = 44.3 bits (103), Expect = 0.072, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 72/246 (29%), Gaps = 61/246 (24%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G + + + ++ + +G + G + I + ++ G
Sbjct: 1818 NAGEGTDTVKTALASYTLAANVENLVYTGTGTSAIFSGTGNALDNIITGGANADTLSGGA 1877
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG----------------------- 294
N + + +VG +G+D + ++A++V E++G
Sbjct: 1878 GNDMLDGGAGADHLVGGTGDDTYVVDNASDVITENAGEGTDTIRTNLATYSLAALGNVEN 1937
Query: 295 -------------------------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
ND DG +G DT A + +Y + + +V +
Sbjct: 1938 LTYTGTAAFTGTGNAAANAIIGGAGNDTLDGGTGADTLIGGAGNDIYIVDDAGD--VVVE 1995
Query: 330 ANEHKQDFLS----------DVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + +VE L + + + + A+ + L G D
Sbjct: 1996 VAGGGTDIVKTVLASYTLGANVENLTYTGSSAFAGTGNELDNAITGGAAADTLSGGAGND 2055
Query: 379 VFESMK 384
+
Sbjct: 2056 TLDGGA 2061
>gi|1477457|gb|AAB17220.1| RTX-1 toxin determinant [Actinobacillus pleuropneumoniae]
Length = 1022
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 31/256 (12%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + I+ G+D L G I ++ + G + +
Sbjct: 743 DDEIYGNDGHDILYGDDGNDVIHGGDGNDHL--VGGNGNDRLIGGKGNNFLNGGDGDDEL 800
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + ++G +GND++ G+ N+F GND G G D + Y + I
Sbjct: 801 QVFEGQYN-VLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEYGRHIIIE 859
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ DV +R D + + + L Y Y
Sbjct: 860 KGGDDDTLLLSDLS---FKDVGFIRIGDDLLVNKRIGGT--LYYHEDY--------NGNA 906
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++K +++ G EG + + + D Y+T GR + F
Sbjct: 907 LTIKDWFKEG-KEG------------QNNKIEKIVDKDGAYVLSQYLTELTAPGRGINYF 953
Query: 441 KALEYIASHEDLINAF 456
LE + + NA
Sbjct: 954 NGLEEKLYYGEGYNAL 969
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D + GN +++ + GNDV G G D + + N +
Sbjct: 735 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 794
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D ++ Q F L ++ + + + +G+D+
Sbjct: 795 DGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDI 845
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GNDV+ G N+ +GND G G +
Sbjct: 737 FHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGDG 796
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+++ + +++ A + I Y+ Y
Sbjct: 797 DDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEY 852
>gi|148264595|ref|YP_001231301.1| putative outer membrane adhesin like protein [Geobacter
uraniireducens Rf4]
gi|146398095|gb|ABQ26728.1| putative outer membrane adhesin like protein [Geobacter
uraniireducens Rf4]
Length = 3598
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 14/174 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I P ++I + GDD+L + I S+I G E N ++
Sbjct: 1514 DINRLAATLPSAESIVGTAGDDILVGSDIN-------------STILGLEGNDVLSGADG 1560
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G++GND + GN ++ + G+DV +G SG D + + + + V
Sbjct: 1561 DDWLEGAAGNDTLAGNMGDDNLYGGDGDDVLNGGSGRDYIEAGNGANVIRFEQGSGVDFV 1620
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
Q D + + AD + N + I + Y L+ G D F
Sbjct: 1621 RTRLADGQADTIEFGAGITSADLQVQLGNQRYWDIQPGDSGYATLVVGTGDDAF 1674
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 47/110 (42%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ G + I + + + I GY+ N I + + G +G+D++ G S N+ F+
Sbjct: 1714 IAGWQSGFDGDDILVGSNADDDINGYDGNDAIRARAGNDYLNGGAGSDLMDGGSGNDYFY 1773
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
SG+DV G G DT + Y + IV D + + +S
Sbjct: 1774 AGSGSDVLAGGRGDDTLIGSSGEDTYLFNLGDGNDIVEDNWDGGRKTISF 1823
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 69/219 (31%), Gaps = 35/219 (15%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G D Y DS V +Y P++ FG+ IY + + ++
Sbjct: 1131 GDDTIYGTDSHYYDV-AYDAPRNDNDTYLFGWGDG--------HDTIYNRNESLISSDTI 1181
Query: 208 KIEVQQKDSPFIQT----------IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--- 254
+ + S I G D + + Y + +S
Sbjct: 1182 RFKDGITASDVRFEGVLGYNEDLRIVLGDGTDSITVKNW-FASAYYQIARMEFSDGTVLD 1240
Query: 255 -----------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
G N I E++ G +G+D + G N+ SGND+ G G
Sbjct: 1241 AAYVASHLVKEGTAGNDVILGSRQSETISGYAGDDTLYGGDGNDRLDGGSGNDMLAGGYG 1300
Query: 304 LDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQDFLSDV 341
DT+ + Y F N ++ + +F +DV
Sbjct: 1301 NDTYLFGRGDGHDTAYEGFGNGYYWVNSPDDAIEFKADV 1339
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 32/93 (34%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ I G + I ++ G +GND + G N + + ND+ G +G D
Sbjct: 744 FNGIQGGNGDDIILGDDQSRTIYGGNGNDTLFGGGGNEMLVGGNDNDIISGGAGDDQLRG 803
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
A Y R + D S +
Sbjct: 804 EAGDDQYIFGRGSGNDNIVDGQGRNSILFSGLN 836
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 94/270 (34%), Gaps = 30/270 (11%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------ 308
GY ++ I+ + + SGNDV+ G N+ G+D+ DG +G DT +
Sbjct: 1083 GYRQDDAISGGAGNDYIDARSGNDVISGGDGNDTISAGLGDDIIDGGTGDDTIYGTDSHY 1142
Query: 309 ----YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
Y AP Y F +D ++ + L + +RF D I + +V+ +L Y
Sbjct: 1143 YDVAYDAPRNDNDTYLFG-WGDGHDTIYNRNESLISSDTIRFKD-GITASDVRFEGVLGY 1200
Query: 365 TASYEDLIQVIGQDVFES------MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
EDL V+G +Y+ E D T Y+ S+ G+D
Sbjct: 1201 ---NEDLRIVLGDGTDSITVKNWFASAYYQIARMEFSDGTVLDAAYVASHLVKEGTAGND 1257
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+R T G Y D ++ + L + FG +G
Sbjct: 1258 VILGSRQSETISGYAG------DDTLYGGDGNDRLDGGSGNDMLAGGYGNDTYLFGRGDG 1311
Query: 479 RFVTFDS---YLYLGSYDDLRNVFGSDRGA 505
++ Y + D F +D
Sbjct: 1312 HDTAYEGFGNGYYWVNSPDDAIEFKADVLP 1341
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I +++ G SGND+++ ++ +GND+ G G DTF + A
Sbjct: 1988 LDGGSGHDRIDAGAGNDAIYGGSGNDLIMAGEGDDFVHAGTGNDIAYGGLGNDTFVFNAG 2047
Query: 313 SYLYKIYR 320
L I +
Sbjct: 2048 DGLLTIEQ 2055
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ GDD L T G L + + + G + + + + + + +GND + G
Sbjct: 1955 TDGDDRLMGTEWGDS-----LEGGAGNDLVYGLDGDDYLDGGSGHDRIDAGAGNDAIYGG 2009
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
S N++ G+D +G D + + + + + +
Sbjct: 2010 SGNDLIMAGEGDDFVHAGTGNDIAYGGLGNDTFVFNAGDGLLTI 2053
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 24/64 (37%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG+ G+D G + NN+ GND G G D + Y+ + + D +
Sbjct: 2167 VGAEGDDYFTGTAGNNIVETGGGNDYLVGGFGNDRLMGGSGDDTYEFNLGDGVDTIVDFS 2226
Query: 332 EHKQ 335
Sbjct: 2227 SPGM 2230
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 28/79 (35%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G S +++ +GNDV DG +G D Y+ R ++ ++ D +
Sbjct: 1400 LQGTSDDDILEGGAGNDVLDGGAGNDLLRGRDGGDTYRFGRGYGNDVIEESGWGGVDTVE 1459
Query: 340 DVERLRFADQCIDSVNVKQ 358
+ +D
Sbjct: 1460 FQAGIIPSDLTFTIDTNGA 1478
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 26/162 (16%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + I L + +I G N T+ E +VG + ND++ G + ++ +G+D
Sbjct: 749 GGNGDDIILGDDQSRTIYGGNGNDTLFGGGGNEMLVGGNDNDIISGGAGDDQLRGEAGDD 808
Query: 297 --VFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFL--------------- 338
+F SG D I V N + DF+
Sbjct: 809 QYIFGRGSGNDNIVDGQGRNSILFSGLNPGDITVTTPNSYNDDFVFSIKDTGETLHIAGG 868
Query: 339 --------SDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + R FAD + + + Y +DLI
Sbjct: 869 WNWYWYENTSINRFIFADGTVWNKENAINAATSYPTEGDDLI 910
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 10/111 (9%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ GND ++G + + G+D+ +G D + Y R + + + D
Sbjct: 2437 IRGTDGNDTLLGTATYDYIRGGDGDDLIISGTGGDYLRGTGGNDTYVFNRGDGEVEISDF 2496
Query: 331 NEHKQDFLSDV----------ERLRFADQCIDSVNVKQRSILEYTASYEDL 371
E + LRF D +I D+
Sbjct: 2497 LEEGIGNVLRFGPGITPEDLRRHLRFEDGYFIIAFDNGDTIYLDGFDPNDV 2547
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 49/149 (32%), Gaps = 4/149 (2%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG-NDVVIGNS 284
G D D+ + + + S + + + +++++ + +D + G
Sbjct: 2540 DGFDPNDVDNSPRSVDTFAFDDGTTLSFAELARYTFVVEGDNLDNLLTGTNLDDRLYGYD 2599
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVER 343
++ +G DV G +G D Y + + D E+ LS +
Sbjct: 2600 GSDNLDSGTGEDVLTGGTGTDVLLGGGGRDAYIFNLGDGVDTITDTAENGIGNILSFGQG 2659
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ D + + Y A + +I
Sbjct: 2660 ITINDLSLSLTGTTLT--IGYGAYGDAVI 2686
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G+S +D++ G + N+V +GND+ G G DT+ + I +
Sbjct: 1402 GTSDDDILEGGAGNDVLDGGAGNDLLRGRDGGDTYRFGRGYGNDVIEESGWGGV 1455
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G +GND+V G ++ SG+D D +G D + + + L ++ +
Sbjct: 1968 DSLEGGAGNDLVYGLDGDDYLDGGSGHDRIDAGAGNDAIYGGSGNDLIMAGEGDDFVHAG 2027
Query: 329 DANEHKQDFLSDVERLRF 346
N+ L + + F
Sbjct: 2028 TGNDIAYGGLGN-DTFVF 2044
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 12/115 (10%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+D ++G + +GND+ G G D + +AI N+
Sbjct: 1955 TDGDDRLMGTEWGDSLEGGAGNDLVYGLDGDDYLDGGSGHDRIDAGAGNDAIYGGSGNDL 2014
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQDVFESMKHFY 387
A + D V+ + + Y + + G + + +
Sbjct: 2015 IM-----------AGEGDDFVHAGTGNDIAYGGLGNDTFVFNAGDGLLTIEQDYM 2058
Score = 41.3 bits (95), Expect = 0.57, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+VG+ D +IG S ++ + +D+ G++G DT+ + A + I
Sbjct: 2304 IVGTPEQDTLIGTSGDDRIRGLASDDLLKGNAGDDTYLFQAGDGVDSIDD 2353
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 21/128 (16%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVF-------------DGSSGLDTFFYYAP---SYLY 316
G +GNDV+ G + N++ G D + G G+DT + A S L
Sbjct: 1411 GGAGNDVLDGGAGNDLLRGRDGGDTYRFGRGYGNDVIEESGWGGVDTVEFQAGIIPSDLT 1470
Query: 317 KIYRFENAIIVYDANEHKQDFLS----DVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
A+++ LS ++ER F++ + R S E ++
Sbjct: 1471 FTIDTNGALLITIKGSGDSLRLSNGTYNIERYVFSNGTTLTSADINRLA-ATLPSAESIV 1529
Query: 373 QVIGQDVF 380
G D+
Sbjct: 1530 GTAGDDIL 1537
>gi|318606426|emb|CBY27924.1| calcium-dependent protease precursor [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 1280
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 10/158 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA--QHTV 267
V K T+ GDD+L G KN I + G + + A Q ++
Sbjct: 667 SVFIKGGRGNTTLVGGDGDDVL---AGGIGKNTIIGGSGKAVIYAGPQGDTIYAAEQGSI 723
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I G D + G N+V GN + DG G++ + Y I R + +
Sbjct: 724 I---HAGGGADKIYGGKGNDVIEAGQGNALIDGGGGINVVSLHGTHADYIITRTASGYQI 780
Query: 328 YD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D A L ++++L F+D + ++
Sbjct: 781 RDKVAGRDGTLALKNIQKLNFSDISAIDLQEDTIVPID 818
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 196 GAPKG--SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-NTESWSS 252
G+ + G++++ I +GG D + ++G +++ + +
Sbjct: 598 GSNTYVGNRGDDVFVISASDDPKNIK----GNGGRDTV--LIVGKKAVTLNMARSGVTLA 651
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
GG ++ I+ + G GN ++G ++V G + G SG YA
Sbjct: 652 QGGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDDVLAGGIGKNTIIGGSG--KAVIYAG 709
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
IY E I++ D + + + +++ ++
Sbjct: 710 PQGDTIYAAEQGSIIHAG--GGADKIYGGKGNDVIEAGQGNALIDGGGGINVVSLHGTHA 767
Query: 370 D 370
D
Sbjct: 768 D 768
Score = 44.7 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 4/124 (3%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + ++ G SGNDV+ + + G++ + G+ G D F A I
Sbjct: 567 ANRLKVSNLYGGSGNDVLKAGTQGSWLVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNG 626
Query: 323 NAIIVYDANEHKQDF---LSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
V + S V + D + ++ L+ G D
Sbjct: 627 GRDTVLIVGKKAVTLNMARSGVTLAQGGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDD 686
Query: 379 VFES 382
V
Sbjct: 687 VLAG 690
Score = 41.3 bits (95), Expect = 0.52, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 3/133 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SG + + N S++ G N + T +VG G++ +GN
Sbjct: 547 SGEATTTAYAQLTNRHRVLSANRLKVSNLYGGSGNDVLKAGTQGSWLVGRGGSNTYVGNR 606
Query: 285 ANNVFFESSGND--VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++VF S+ +D G+ G DT + + + + + +S
Sbjct: 607 GDDVFVISASDDPKNIKGNGGRDTVLI-VGKKAVTLNMARSGVTLAQGGDGDDVIISGGN 665
Query: 343 RLRFADQCIDSVN 355
F +
Sbjct: 666 NSVFIKGGRGNTT 678
Score = 41.3 bits (95), Expect = 0.57, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 21/179 (11%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKN--MTIAQHTVIESVVGSS 275
+ +Y G+D+L G L S+ G + I+ +++ G+
Sbjct: 572 VSNLYGGSGNDVLKAGTQGSW-----LVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNG 626
Query: 276 GNDVVI-----------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G D V+ S + G+DV G ++ F + +
Sbjct: 627 GRDTVLIVGKKAVTLNMARSGVTLAQGGDGDDVIISG-GNNSVFIKGGRGNTTLVGGDGD 685
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFES 382
++ + + +A D++ Q SI+ + + G DV E+
Sbjct: 686 DVLAGGIGKNTIIGGSGKAVIYAGPQGDTIYAAEQGSIIHAGGGADKIYGGKGNDVIEA 744
>gi|291567838|dbj|BAI90110.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 805
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI ++++G GND + G N+ +G D G G D A
Sbjct: 600 LRGTPGNDTIYGLAGDDTLIGGKGNDYLDGGPGNDSLVGGAGRDTLIGGKGNDILNGGAG 659
Query: 313 SYL------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ I+ F A +H DF +++ ++ + + +
Sbjct: 660 QDILTGGPGADIFVFGFGESRVAAPDHITDFDIGTDKIDLLNRRGRDIGAPENFTRARNS 719
Query: 367 SYEDLIQVIGQ 377
+ +L +++ Q
Sbjct: 720 NAPNLRRLVNQ 730
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 41/139 (29%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ IY + T+ G+D LD G N
Sbjct: 603 TPGNDTIYGLAGDD-------TLIGGKGNDYLD----------------------GGPGN 633
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+S+VG +G D +IG N++ +G D+ G G D F +
Sbjct: 634 ---------DSLVGGAGRDTLIGGKGNDILNGGAGQDILTGGPGADIFVFGFGESR---V 681
Query: 320 RFENAIIVYDANEHKQDFL 338
+ I +D K D L
Sbjct: 682 AAPDHITDFDIGTDKIDLL 700
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 8/120 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ GND++ G N+ + +G+D G G D + + +I
Sbjct: 591 IRGTRGNDLLRGTPGNDTIYGLAGDDTLIGGKGNDYLDGGPGNDSLVGGAGRDTLIGGKG 650
Query: 331 NE-----HKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N+ QD L+ + F + + DL+ G+D+
Sbjct: 651 NDILNGGAGQDILTGGPGADIFVFGFGESRVAAPDHITDFDIGTDKIDLLNRRGRDIGAP 710
>gi|238783231|ref|ZP_04627256.1| RTX toxin and Ca2+-binding protein [Yersinia bercovieri ATCC 43970]
gi|238715824|gb|EEQ07811.1| RTX toxin and Ca2+-binding protein [Yersinia bercovieri ATCC 43970]
Length = 1652
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 63/173 (36%), Gaps = 11/173 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVK--NYIDLNTESWSS 252
G + + GN D + D G G D + L N ++L + ++
Sbjct: 1135 GYKEFTGGNQSDTFIFNNPDIGERVSQLDGGEGSDTIILAEPKSDDISNNVNLTSGVYTQ 1194
Query: 253 IGGYEKNMTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + IA+ + IE+++ S ND + GN+ +N G D G G D A
Sbjct: 1195 LSTGKVQ-HIAKLSNIENIISHKSTNDTINGNNQDNYLNGLGGKDTIFGYGGNDFIALQA 1253
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ I Y ++ + +V + + + + S +L+Y
Sbjct: 1254 G-----FAAGGDGIDTYHILQNSTEKTVEV-IIAESSESLTSRTETSNILLDY 1300
>gi|124024815|ref|YP_001013931.1| hypothetical protein NATL1_01021 [Prochlorococcus marinus str.
NATL1A]
gi|123959883|gb|ABM74666.1| Hypothetical protein NATL1_01021 [Prochlorococcus marinus str.
NATL1A]
Length = 595
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G G DV+ G N+ F + GND DG S D Y Y + +
Sbjct: 312 EVLDGIDGPDVLKGGLGNDTFKGNGGNDTIDGGSDFDIATYSGNFSDYTFTIANKVVTIS 371
Query: 329 D---ANEHKQDFLSDVERLRFADQCIDSVN 355
D + D LS++E+L F D+ +
Sbjct: 372 DNRLSENDGIDTLSNIEKLTFVDKNALITS 401
>gi|330977917|gb|EGH77820.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 611
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 327 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G S +++ +G D G +G DTF + +
Sbjct: 387 TEGNDVINGGAAHEQIFGLAGKDTLNGGSGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G K+ A H + + VV G++G D + G N+V ++G D DG +G DT
Sbjct: 514 GLSGNLKDTLNASHFIFQHVVEGTAGGDTLTGTDGNDVLNGNAGTDRIDGGAGADTITGG 573
Query: 311 APSYLYKIYRFENAII 326
A + + I
Sbjct: 574 ADADTLTGGAGADLFI 589
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 27/72 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 534 VEGTAGGDTLTGTDGNDVLNGNAGTDRIDGGAGADTITGGADADTLTGGAGADLFIYNSR 593
Query: 313 SYLYKIYRFENA 324
Y+ Y
Sbjct: 594 LDSYRNYTASGT 605
>gi|291383997|ref|XP_002708619.1| PREDICTED: matrilysin-like [Oryctolagus cuniculus]
Length = 273
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 43/188 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W++ + Y+ + +++ + + + A WSK + L F+ + +DI
Sbjct: 107 WTSRVVTYRIVSYP--FPTQNLSPVRVDQ--IVAKAFNLWSKEIPLHFKRLRLGIADIMI 162
Query: 82 ISSNNGYVCTPRYDSRY-------------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FDK + W G G + A HE+
Sbjct: 163 GFARGAHGDASPFDGPGNTLAHAFPPGPGLGGDAHFDKDEHWTDGSSLGINFLYVATHEL 222
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H N VM + G DI
Sbjct: 223 GHSLGLDHSSDPNA-------------------VMYPTYEHVDSQNFKLG------QDDI 257
Query: 189 VAVQKIYG 196
+QK+YG
Sbjct: 258 EGIQKLYG 265
>gi|221128237|ref|XP_002168334.1| PREDICTED: similar to matrix metalloproteinase, partial [Hydra
magnipapillata]
Length = 458
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 65/216 (30%), Gaps = 53/216 (24%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+LL+ W + + + +S + + + R + +W+ V +L F E
Sbjct: 39 KYLLQGTKWFKQNLTWAVENDNNDGISRT------DVRNIMRRSFEKWAAVTNLKFIELE 92
Query: 75 ----IHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWR---Y 112
+DI+ + P ++ + +FD +V+
Sbjct: 93 KRPVNSADIRVSFEIKKHGDPYAFDGEGGTLAHAFYPLENTGLAGDCHFDDDEVFTIAAN 152
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GH++GL H +M +
Sbjct: 153 PSGSQKSLLWVAVHELGHSIGLEHSDVRGA-------------------IMYPWYTGFKG 193
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D + DI +Q +YG Y
Sbjct: 194 QDFDLTF------DDISGIQSLYGYKVLPTLKTTYT 223
>gi|170729544|ref|YP_001774977.1| hemolysin-type calcium binding protein [Xylella fastidiosa M12]
gi|167964337|gb|ACA11347.1| hemolysin-type calcium binding protein [Xylella fastidiosa M12]
Length = 1814
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D DL N L + G N T+ +++ G +GND + G
Sbjct: 925 GSDAADLLFGDAGANL--LRGGGGDDVLSGGAGNDTLYGGDGNDALYGDAGNDTLYGGVG 982
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFLSDVERL 344
N++ +G+D+ DGS G + A + + K+ Y + ++ + + D + +
Sbjct: 983 NDLLLGGAGDDLLDGSEGSNRLEGGAGNDVLKVAYWSTDNVLNGGSGDDLLDGSAYGDTY 1042
Query: 345 RF 346
F
Sbjct: 1043 LF 1044
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ +++ G GND + G++ N+ + GND+ G +G D
Sbjct: 941 LRGGGGDDVLSGGAGNDTLYGGDGNDALYGDAGNDTLYGGVGNDLLLGGAGDDLLDGSEG 1000
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S ++ ++ A + L+ D +D + ++ LI
Sbjct: 1001 SN--RLEGGAGNDVLKVAYWSTDNVLNGGS----GDDLLDGSAYGDTYLFNKGDGHDTLI 1054
Query: 373 QVIGQDVFESMKHFYEFGLS---EGRDITFD 400
+ G D + EG+D+ D
Sbjct: 1055 ERDGTDTLVFGAGIVASQVRRLHEGQDVVLD 1085
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G+ + + + + G G+D + G + +++ +GNDV DG G + A
Sbjct: 1457 TLQGWGSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLLLGDNGNDVLDGGEGHNRLEGGA 1516
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ K+ ++ V+ D L
Sbjct: 1517 GKDVLKVSTDGSSDNVFSGGT-GDDMLYG 1544
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 23/198 (11%)
Query: 225 SGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKN------MTIAQHTVIESVVGS 274
G D + LT G ++ ++ + + MT + +++ G
Sbjct: 1402 GNGHDSIRMKDWLTSDGEYNRTGNIEEILFADGTRWTGDTLGWREMTTFGTSGNDTLQGW 1461
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---AIIVYDAN 331
+D+++G + ++V G+D G +G D + + N D
Sbjct: 1462 GSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLLLGDNGNDVLDGGEGHNRLEGGAGKDVL 1521
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED----LIQVIGQDVF---ESMK 384
+ D SD F+ D + Y ++ D +++ G D E +
Sbjct: 1522 KVSTDGSSDN---VFSGGTGDDMLYGSVHSDTYLFNWGDGRDTIVEQGGFDKIVFGEEIA 1578
Query: 385 HFYEFGLSEGRDITFDSY 402
L EG+D+ D Y
Sbjct: 1579 VSDIHVLREGQDVVLDLY 1596
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 66/218 (30%), Gaps = 62/218 (28%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T + + G+D L G + I L + G + T+ + ++G +GNDV+
Sbjct: 1448 TTFGTSGNDTL----QGWGSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLLLGDNGNDVL 1503
Query: 281 IGNSANNVFFESSGNDVF------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G +N +G DV G +G D + S Y + +
Sbjct: 1504 DGGEGHNRLEGGAGKDVLKVSTDGSSDNVFSGGTGDDMLYGSVHSDTYLFNWGDGRDTIV 1563
Query: 329 DAN-------------------EHKQDFL-------------------------SDVERL 344
+ QD + +D+E++
Sbjct: 1564 EQGGFDKIVFGEEIAVSDIHVLREGQDVVLDLYNGYDSIRLKDWLTSDGTRNSNADIEQI 1623
Query: 345 RFADQCIDSVNVKQRSILEYT--ASYEDLIQVIGQDVF 380
FAD + S L+ A + L G+++
Sbjct: 1624 VFADGTVWSGETLSSIGLKTLGSADNDTLNGWNGRNIL 1661
Score = 44.0 bits (102), Expect = 0.079, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 47/193 (24%), Gaps = 61/193 (31%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ L + Y T+ + G D L L+ +
Sbjct: 1027 GSGDDLLDGSAYGDTYLFNKGDGHDTLIERDGTDTLVFGAGIVASQVRRLHEGQDVVLDL 1086
Query: 256 YEKNMTI-------AQHTVIESV-------------------------VGSSGNDVVIGN 283
+I T +S +G+SGND + G
Sbjct: 1087 GNGQDSIRLKDWLTCYGTRNDSADIEQIVFADGTLWTPETLSSMGLTTLGTSGNDTLKGW 1146
Query: 284 SA------------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSY 314
+N +GND V +G SG DT + +
Sbjct: 1147 QGKDILLGGDGDDILDGGDGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDTLYGSGHAD 1206
Query: 315 LYKIYRFENAIIV 327
Y + + +
Sbjct: 1207 TYLFNKGDGHDTI 1219
Score = 44.0 bits (102), Expect = 0.090, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 37/130 (28%)
Query: 273 GSSGNDVVIGN--SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--------RFE 322
G +GNDV+ + SA+NV SG+D GS DT+ + I F
Sbjct: 1172 GGAGNDVLKVSYWSADNVLNGGSGDDTLYGSGHADTYLFNKGDGHDTIVEHYGSEKIVFG 1231
Query: 323 NAIIVYDAN--EHKQDFL-------------------------SDVERLRFADQCIDSVN 355
I+ + QD + ++E++ FAD + +
Sbjct: 1232 AGIVADNVRLLREGQDVVLDLGNGHDSIRFKDCFHANHNRNIFVNIEQMVFADGTVWTGE 1291
Query: 356 VKQRSILEYT 365
Sbjct: 1292 TLSTLGFSTL 1301
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 24/82 (29%), Gaps = 12/82 (14%)
Query: 287 NVFFESSGNDVF-----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
N +GNDV G +G D + A S Y + + + +
Sbjct: 1316 NRLEGGAGNDVLKVASNSSDNVFSGGTGDDMLYGSAHSDTYLFNQGDGHDTIIEPG-GSF 1374
Query: 336 DFLSDVERLRFADQCIDSVNVK 357
D L E + D +
Sbjct: 1375 DRLVFGEGITADDVRVVRQGQD 1396
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 248 ESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIG---NSANNVFFESSGNDVFDG 300
E+ SSIG G N T+ +VG G+DV+ +S++NV GND+ G
Sbjct: 1634 ETLSSIGLKTLGSADNDTLNGWNGRNILVGEDGDDVLKVSMFDSSDNVLVGCRGNDMLYG 1693
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIV 327
SS D +F+ I A +
Sbjct: 1694 SSNSDIYFFDQGDGHDTIIEQGGADTL 1720
>gi|46143512|ref|ZP_00135090.2| COG2931: RTX toxins and related Ca2+-binding proteins
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208908|ref|YP_001054133.1| RTX-I toxin determinant A [Actinobacillus pleuropneumoniae L20]
gi|307257469|ref|ZP_07539236.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|126097700|gb|ABN74528.1| RTX-I toxin determinant A [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|306864049|gb|EFM95965.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 1022
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 31/256 (12%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ IY + I+ G+D L G I ++ + G + +
Sbjct: 743 DDEIYGNDGHDILYGDDGNDVIHGGDGNDHL--VGGNGNDRLIGGKGNNFLNGGDGDDEL 800
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + ++G +GND++ G+ N+F GND G G D + Y + I
Sbjct: 801 QVFEGQYN-VLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEYGRHIIIE 859
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ DV +R D + + + L Y Y
Sbjct: 860 KGGDDDTLLLSDLS---FKDVGFIRIGDDLLVNKRIGGT--LYYHEDY--------NGNA 906
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++K +++ G EG + + + D Y+T GR + F
Sbjct: 907 LTIKDWFKEG-KEG------------QNNKIEKIVDKDGAYVLSQYLTELTAPGRGINYF 953
Query: 441 KALEYIASHEDLINAF 456
LE + + NA
Sbjct: 954 NGLEEKLYYGEGYNAL 969
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D + GN +++ + GNDV G G D + + N +
Sbjct: 735 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 794
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D ++ Q F L ++ + + + +G+D+
Sbjct: 795 DGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDI 845
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GNDV+ G N+ +GND G G +
Sbjct: 737 FHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGDG 796
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+++ + +++ A + I Y+ Y
Sbjct: 797 DDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKEY 852
>gi|332561203|ref|ZP_08415521.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides WS8N]
gi|332275001|gb|EGJ20317.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides WS8N]
Length = 621
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 8/136 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVKNYIDLNTESWSSIGGY 256
G+ GN+IY + ++ GG D + + +G + L S G
Sbjct: 416 GNSGNDIY---ITDGGDTIVEA--SGGGTDTVRSSASCTLGANLERLALTGTSAIVATGN 470
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + ++ ++ G++GND + G + + +GNDV G +G DTF + L
Sbjct: 471 RLDNVLTGNSAANTLAGNAGNDRLSGGAGADRLIGGTGNDVLAGGAGADTFVFDTALVLA 530
Query: 317 KIYRFENAIIVYDANE 332
R + ++ D+
Sbjct: 531 NRDRITDFRVIDDSIH 546
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 13/116 (11%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G+S NN + G D DG+ G DT + + IY + + +A+ D +
Sbjct: 386 FITGDSGNNRLAGTLGGDTLDGAGGADTLIGNSGND---IYITDGGDTIVEASGGGTDTV 442
Query: 339 S---------DVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ERL I + + ++L ++ L G D
Sbjct: 443 RSSASCTLGANLERLALTGTSAIVATGNRLDNVLTGNSAANTLAGNAGNDRLSGGA 498
Score = 38.6 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 53/160 (33%), Gaps = 20/160 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYA 311
I G N +A +++ G+ G D +IGNS N+++ G+ + + G DT A
Sbjct: 387 ITGDSGNNRLAGTLGGDTLDGAGGADTLIGNSGNDIYITDGGDTIVEASGGGTDTVRSSA 446
Query: 312 ----PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ L ++ + IV N L L A
Sbjct: 447 SCTLGANLERLALTGTSAIVATGNRLD-------NVLTGNSAANTLAGNAGNDRLSGGAG 499
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ LI G DV F FD+ L L +
Sbjct: 500 ADRLIGGTGNDVLAGGAGADTF--------VFDTALVLAN 531
>gi|325958660|ref|YP_004290126.1| family 2 glycosyl transferase [Methanobacterium sp. AL-21]
gi|325330092|gb|ADZ09154.1| glycosyl transferase family 2 [Methanobacterium sp. AL-21]
Length = 1008
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFAD 458
D YL +Y D+R HYI +G KEGRNP F A Y +H D+ + +
Sbjct: 282 DVGYYLNTYADIRKT----GKDPIIHYIYNGFKEGRNPSREFDAEYYFENHSDVKKSKLN 337
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
H++ +G +E R +
Sbjct: 338 P-------LVHYALYGIKENRKTHREETEAESKN 364
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 18/133 (13%)
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDL 571
G +E + + Y+ ++ D+ D H+ G++EGR+ + F+ +
Sbjct: 271 GYQEIKKNNLLDVGYYLNTYADIRKTGKDP-------IIHYIYNGFKEGRNPSREFDAEY 323
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL- 630
Y ++ D+ + HY +G+KE R + +S E +AD+S+
Sbjct: 324 YFENHSDVKK----SKLNPLVHYALYGIKENRKTHREETEAESKNYSGEIFLRRADMSIE 379
Query: 631 ----SFDHKKVDL 639
+ + D+
Sbjct: 380 GCVEVGETEASDI 392
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 13/96 (13%)
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYL 487
G +E + + Y+ ++ D+ D H+ G +EGR + FD+
Sbjct: 271 GYQEIKKNNLLDVGYYLNTYADIRKTGKDP-------IIHYIYNGFKEGRNPSREFDAEY 323
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
Y ++ D++ + HY +G+KE R
Sbjct: 324 YFENHSDVKK----SKLNPLVHYALYGIKENRKTHR 355
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
+ + Y +Y D+ + + + H+ G EGR+ + FD+ Y
Sbjct: 271 GYQEIKKNNLLDVGYYLNTYADIRK----TGKDPIIHYIYNGFKEGRNPSREFDAEYYFE 326
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
++ D++ + HY +G+KE R
Sbjct: 327 NHSDVKK----SKLNPLVHYALYGIKENRK 352
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 12/95 (12%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
D YL +Y D+R G D HYI +G KEGRNP F A Y +H D+ +
Sbjct: 281 LDVGYYLNTYADIRK-TGKD---PIIHYIYNGFKEGRNPSREFDAEYYFENHSDVKKSKL 336
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
+ H++ +G +E R +
Sbjct: 337 NP-------LVHYALYGIKENRKTHREETEAESKN 364
>gi|301610879|ref|XP_002934971.1| PREDICTED: collagenase 3-like [Xenopus (Silurana) tropicalis]
Length = 472
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 52/190 (27%), Gaps = 45/190 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKF 81
W + Y+ T + ++ + AL WS V L F + +DI
Sbjct: 114 WPRNNLTYRIVNYTPDLSTSEV-------DRAIKKALKVWSDVTPLNFTRLRTGTADIMV 166
Query: 82 ISS---NNGYVCTPRYDSR---YFMEINFDKADV------WRYGIGKGTILSHNALHEIG 129
+ Y D F D KG L A HE G
Sbjct: 167 SFGKKEHGDYYPFDGPDGLLAHAFPPGEKIGGDTHFDDDEMFSTDNKGYNLFVVAAHEFG 226
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HALGL H S + V +Y ++ D+
Sbjct: 227 HALGLDHSRDPG---------------SLMFPVYTYTETSQFLLP----------DDDVQ 261
Query: 190 AVQKIYGAPK 199
+Q +YG
Sbjct: 262 GIQALYGPGN 271
>gi|16126847|ref|NP_421411.1| calcium-binding protein [Caulobacter crescentus CB15]
gi|13424183|gb|AAK24579.1| calcium-binding protein [Caulobacter crescentus CB15]
Length = 650
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 61/216 (28%), Gaps = 42/216 (19%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G+D LD Y D + + T IE++ GS+ ND +IG
Sbjct: 62 GNDTLDGGAGSDWAAYEDATAGVKVDLNLSGAQNTGGGGTDRLTSIENLYGSAFNDTLIG 121
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFY---------------------------YAPSYL 315
N+ +N+ +G D G G DT + A
Sbjct: 122 NAGDNMITGGAGADSITGGKGDDTLWGSAGNDTLDGGDGDDWMVGGAGDDVIKGGAGGDW 181
Query: 316 YKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ V D +D LS VE L + + + A
Sbjct: 182 SSYEDATAGVTVDLTKTTAQDTIGAGKDTLSGVENLWGSKFADVLTGDAGSNYIWGDAGD 241
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ L G D F EG FD+ Y
Sbjct: 242 DKLYGGAGDDFFAGGAGVNVIDGGEG----FDTIDY 273
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+++G GNDV+I N+ +N +GNDV DG G D Y + + A +
Sbjct: 419 IENLIGGHGNDVLIANADDNRIEGLTGNDVIDGGEGFDFATYRSAPGGVWV-DLTKAGVA 477
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D D L +E LR + + + LE + LI G+D+
Sbjct: 478 QDTRSAGIDTLISIEGLRGSVYADVLIGNAGANALEGEYDDDLLIGGGGRDLLTGGASAD 537
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
F + G + D+ D+ F +
Sbjct: 538 TFKFAVGDSVALDNT---SGNLDVITDFEA 564
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 51/144 (35%), Gaps = 8/144 (5%)
Query: 243 IDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+DLN + G ++ I +++ G +G+D + G+ N+V G+D G
Sbjct: 1 MDLNGTQGADTLIGGAEDDVIYGFGGNDTLRGGAGDDAIAGHEGNDVLQGGDGDDYMLGG 60
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSV 354
G DT A S + V + D L+ +E L + +
Sbjct: 61 PGNDTLDGGAGSDWAAYEDATAGVKVDLNLSGAQNTGGGGTDRLTSIENLYGSAFNDTLI 120
Query: 355 NVKQRSILEYTASYEDLIQVIGQD 378
+++ A + + G D
Sbjct: 121 GNAGDNMITGGAGADSITGGKGDD 144
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 22/178 (12%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH----TVIES------------ 270
GDD++ G +Y D + TI + +E+
Sbjct: 169 GDDVIKGGAGGDWSSYEDATAGVTVDLTKTTAQDTIGAGKDTLSGVENLWGSKFADVLTG 228
Query: 271 ------VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ G +G+D + G + ++ F +G +V DG G DT Y + ++ N
Sbjct: 229 DAGSNYIWGDAGDDKLYGGAGDDFFAGGAGVNVIDGGEGFDTIDYGMSAVGVEVDLSRNI 288
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D LS +E + + + + L A + L G DV E
Sbjct: 289 ATSRFGDTSISDTLSSIELVTGSIYADFIIGNMAENYLYGDAGNDVLRAEGGGDVLEG 346
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 61/188 (32%), Gaps = 25/188 (13%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K+YG G++ + + I G D +D + V +DL
Sbjct: 239 AGDDKLYG----GAGDDFF------AGGAGVNVIDGGEGFDTIDY-GMSAVGVEVDL--- 284
Query: 249 SWSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S + + +I+ + IE V GS D +IGN A N + +GNDV G D
Sbjct: 285 SRNIATSRFGDTSISDTLSSIELVTGSIYADFIIGNMAENYLYGDAGNDVLRAEGGGDVL 344
Query: 308 FYYAPSY-----LYKIYRFENAIIVYDANEH-----KQDFLSDVERLRFADQCIDSVNVK 357
L I + D + ++ +AD +D V
Sbjct: 345 EGGEGDDFLIGSLSDILIGGGGDDQLSVSGGSNYVDGGDGVDALQTFTYADVKVDLRIVI 404
Query: 358 QRSILEYT 365
+ I
Sbjct: 405 AQEIAPGF 412
>gi|110633150|ref|YP_673358.1| hemolysin-type calcium-binding region [Mesorhizobium sp. BNC1]
gi|110284134|gb|ABG62193.1| Hemolysin-type calcium-binding region [Chelativorans sp. BNC1]
Length = 795
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 47/148 (31%), Gaps = 9/148 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N I + V SG+D+V G + N+ SGND G G D F A
Sbjct: 351 ISAGPGNDHIVAGAGDDVVHAGSGDDIVFGGAGNDHLAGESGNDRLYGQDGDDFLFGDAG 410
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYED 370
A + D L E + A D+ + + + L A +D
Sbjct: 411 DDTL----HGGAGRDILHGDDGHDSLKGGEDEDILLAGAGDDTADGGEGADLLDGAEGDD 466
Query: 371 LIQVIGQD---VFESMKHFYEFGLSEGR 395
+Q D + E G R
Sbjct: 467 WLQGRAGDDVLLDGPGADKVEGGDGNDR 494
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 18/177 (10%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+D G G D LD + +DL + + + ++ ++VVG + +D +
Sbjct: 506 FDGGKGHDTLDYAS-TEARVAVDLESGTAKIGESPDDLVS-----CFDAVVGGAADDELK 559
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------ 335
G++ +G+D+ DG G DT A + + I D N+
Sbjct: 560 GSAGGEKLDGGAGDDILDGKGGQDTLLGGAGDDVIADGSGSDVIDAGDGNDRISAAADGD 619
Query: 336 ----DFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQDVFESMKHFY 387
D + L ++ + + + D ++ + HF
Sbjct: 620 DDHYDGAEGCDTLDYSQTSQGVTVDLKEGLACGEETGRDTIVSMENVIGGTGNDHFI 676
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 7/133 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S I G + I + + G+D + +++ GND +G D
Sbjct: 313 SFIEGSPADDLILGTPCADEIDAGCGDDNIDSRGGDDLISAGPGNDHIVAGAGDDVVHAG 372
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL--SDVERLRFADQCIDSVNVKQ-RSILEYTAS 367
+ + F A + A E D L D + F D D+++ R IL
Sbjct: 373 SGDDI----VFGGAGNDHLAGESGNDRLYGQDGDDFLFGDAGDDTLHGGAGRDILHGDDG 428
Query: 368 YEDLIQVIGQDVF 380
++ L +D+
Sbjct: 429 HDSLKGGEDEDIL 441
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 63/187 (33%), Gaps = 17/187 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMT 261
+ P I GDD++ D + GG N L ES + + G + +
Sbjct: 346 GGDDLISAGPGNDHIVAGAGDDVVHAGSGDDIVFGGAGND-HLAGESGNDRLYGQDGDDF 404
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSSGLDTFFYYAP 312
+ +++ G +G D++ G+ ++ +G+D DG G D
Sbjct: 405 LFGDAGDDTLHGGAGRDILHGDDGHDSLKGGEDEDILLAGAGDDTADGGEGADLLDGAEG 464
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDL 371
+ ++ ++ + + + + D D + + L+Y ++ +
Sbjct: 465 DDWLQGRAGDDVLLDGPGADKVEGGDGNDRVVPTHDGTADRFDGGKGHDTLDYASTEARV 524
Query: 372 IQVIGQD 378
+
Sbjct: 525 AVDLESG 531
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 68/227 (29%), Gaps = 34/227 (14%)
Query: 193 KIYGAP-----KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
++YG G G++ ++ G D +L GG I L
Sbjct: 395 RLYGQDGDDFLFGDAGDDT------LHGGAGRDILHGDDGHD----SLKGGEDEDILLAG 444
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------- 297
+ G E + + + G +G+DV++ + GND
Sbjct: 445 AGDDTADGGEGADLLDGAEGDDWLQGRAGDDVLLDGPGADKVEGGDGNDRVVPTHDGTAD 504
Query: 298 -FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ---DFLSDV---ERLRFADQC 350
FDG G DT Y + + + ++ + D + + L+ +
Sbjct: 505 RFDGGKGHDTLDYASTEARVAVDLESGTAKIGESPDDLVSCFDAVVGGAADDELKGSAGG 564
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHFYEFGLSEGR 395
IL+ + L+ G DV S + G R
Sbjct: 565 EKLDGGAGDDILDGKGGQDTLLGGAGDDVIADGSGSDVIDAGDGNDR 611
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D LD + +DL G TI +E+V+G +GND I + A+
Sbjct: 628 GCDTLDYSQTS-QGVTVDLKEGLA--CGEETGRDTI---VSMENVIGGTGNDHFIVDHAS 681
Query: 287 NVFFESSGNDVF 298
G DVF
Sbjct: 682 ASLTGGDGEDVF 693
>gi|296214500|ref|XP_002753656.1| PREDICTED: matrix metalloproteinase-14 [Callithrix jacchus]
Length = 582
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 50/157 (31%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-------- 74
W + I + T + E R A+ W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAIRVWESATSLRFREVPYAYIREGH 171
Query: 75 -IHSDIKFISSNNGYVCTPRYDS-------RYFMEIN------FDKADVWRYGIGK--GT 118
+DI + + + +D YF N FD A+ W G G
Sbjct: 172 EKQADIMIFFAEGFHGDSSPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTLGNANLDGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + Y D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSNDPSAIMAPYYQWMDTEN 268
>gi|56681788|gb|AAW21430.1| leukotoxin A [Pasteurellaceae bacterium I7]
Length = 383
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 227 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 286
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 287 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 323
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 215 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---ILDGGNGDDF 271
Query: 328 YDANEHKQDFLSD 340
D D L
Sbjct: 272 IDGG-KGNDLLHG 283
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 6/114 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 213 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDILDGGNG 268
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+D + G N++ G+D+F G D + + +
Sbjct: 269 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDLTF 322
>gi|34495971|ref|NP_900186.1| calcium binding hemolysin [Chromobacterium violaceum ATCC 12472]
gi|34101825|gb|AAQ58193.1| probable calcium binding hemolysin [Chromobacterium violaceum ATCC
12472]
Length = 1943
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L + I G N ++ + + G +G+D + G N+ GND +G +G
Sbjct: 1763 LRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGLFGEDGNDTLRGGLGNDTLNGGNG 1822
Query: 304 LDTFFYYAPSYLYKIYRFENAIIV 327
DT+ + + +
Sbjct: 1823 NDTYRFGRGDGADLVQDSGGQDAL 1846
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + I + +S+ G +GND++ G + ++ F GND G G DT
Sbjct: 1762 TLRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGLFGEDGNDTLRGGLGNDTLNGGN 1821
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL 338
+ Y+ R + A +V D+ QD L
Sbjct: 1822 GNDTYRFGRGDGADLVQDS--GGQDAL 1846
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 14/138 (10%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L + I G N ++ + + G +G+D + G N+ +GNDV +G G
Sbjct: 1532 LRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGLFGEDGNDTLRGGAGNDVLNGGDG 1591
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR--FADQCIDSVNVKQRSI 361
D ++ D+ + + LR + + + ++
Sbjct: 1592 ADLLEGGDGDD-----------VIVGGRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNV 1640
Query: 362 LEYTASYEDLIQVIGQDV 379
LE + L +DV
Sbjct: 1641 LEGGTGNDTLTGSFARDV 1658
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 14/138 (10%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L + I G N ++ + + G +G+D + G + N+ +GNDV +G G
Sbjct: 1301 LRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGLFGEAGNDTLRGGAGNDVLNGGDG 1360
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR--FADQCIDSVNVKQRSI 361
D ++ D+ + + LR + + + ++
Sbjct: 1361 ADLLEGGDGDD-----------VIVGGRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNV 1409
Query: 362 LEYTASYEDLIQVIGQDV 379
LE + L +DV
Sbjct: 1410 LEGGTGNDTLTGSFARDV 1427
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ + + + G +K I+ +++ G G+D + G NN+ G+D
Sbjct: 2 ATSQGNAGAGTGKTWNGTDKGELISAGDGDDTLNGYGGDDTLNGGPGNNLLDGGDGDDSL 61
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G +G DT + + + +D + D
Sbjct: 62 TGGNGHDTLAGGRGDD--TLVGGVDGDVYLFNLGDGRDLILD 101
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + G +GND +IG ++ +GNDV DG +G D + +
Sbjct: 929 LTGGAGDDLLQGGAGNDVLDGGAGNDTLIGLGGDDTLKGGTGNDVLDGGAGRDVYIFNLG 988
Query: 313 SYLYKI-YRFENAIIVYDANEHK 334
I + NA + + A +
Sbjct: 989 DGQDVIRFDGSNAAVAWSAGDEI 1011
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+T+ +++ G G+DV+IG + N+V + G+D G G DT A S +Y
Sbjct: 346 VTLTGSDGDDTLTGWEGSDVLIGGAGNDVLIGNGGSDTLIGGIGNDTLVGGAGSDVYVFE 405
Query: 320 RFENAIIVYDANEHKQDFLSD 340
++ N L D
Sbjct: 406 AGHGHDVIAAHNVDVAVTLHD 426
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 1/112 (0%)
Query: 237 GGVKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
V + I + SW+S + + + + G +GNDV+ G + N+ G+
Sbjct: 903 AQVGSVIFADGASWTSTQITQWASGVLTGGAGDDLLQGGAGNDVLDGGAGNDTLIGLGGD 962
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
D G +G D A +Y + ++ + S + +RF
Sbjct: 963 DTLKGGTGNDVLDGGAGRDVYIFNLGDGQDVIRFDGSNAAVAWSAGDEIRFG 1014
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + T+ + ++G +GNDV+IGN ++ GND G +G D + + A
Sbjct: 347 TLTGSDGDDTLTGWEGSDVLIGGAGNDVLIGNGGSDTLIGGIGNDTLVGGAGSDVYVFEA 406
Query: 312 PSYLYKIYRFENAIIVY 328
I + V
Sbjct: 407 GHGHDVIAAHNVDVAVT 423
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 13/145 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + ++L + S +++ G E T+ + + G G+DV+IG N+ F +GND
Sbjct: 1063 GANWSLVELLSLSGATLTGTEGKDTLTGGKGNDVIFGLGGDDVLIGADGNDSLFGGAGND 1122
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR--FADQCIDSV 354
+G +G D ++ D+ + + LR + + +
Sbjct: 1123 SLNGGNGADLLEGGDGDD-----------VIVGGRTDGTDWREERDTLRGGAGNDQLTAA 1171
Query: 355 NVKQRSILEYTASYEDLIQVIGQDV 379
++LE + L +DV
Sbjct: 1172 WYGWNNVLEGGTGNDTLTGSFARDV 1196
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 36/156 (23%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--GYEKNMTIAQHTVIESVVGSSGNDV 279
I +GG+D +L GG N DL G G + N T+ + + G G D+
Sbjct: 1541 IQGNGGND----SLYGGNGN--DLLEGGAGDDGLFGEDGNDTLRGGAGNDVLNGGDGADL 1594
Query: 280 VIGNSANN-----------------VFFESSGND-----------VFDGSSGLDTFFYYA 311
+ G ++ +GND V +G +G DT
Sbjct: 1595 LEGGDGDDVIVGGRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNVLEGGTGNDTLTGSF 1654
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+Y + ++ D D + +RF
Sbjct: 1655 ARDVYLFNLGDGQDLIIDKAREATDSDVFRDEIRFG 1690
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 36/156 (23%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--GYEKNMTIAQHTVIESVVGSSGNDV 279
I +GG+D +L GG N DL G G N T+ + + G G D+
Sbjct: 1310 IQGNGGND----SLYGGNGN--DLLEGGAGDDGLFGEAGNDTLRGGAGNDVLNGGDGADL 1363
Query: 280 VIGNSANN-----------------VFFESSGND-----------VFDGSSGLDTFFYYA 311
+ G ++ +GND V +G +G DT
Sbjct: 1364 LEGGDGDDVIVGGRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNVLEGGTGNDTLTGSF 1423
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+Y + ++ D D + +RF
Sbjct: 1424 ARDVYLFNLGDGQDLIIDKAREATDSDVFRDEIRFG 1459
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + + + + G +GND +IG + ++ F +GNDV G+ G D F +
Sbjct: 497 NGTDGDDLLQGEDGADILDGGAGNDTLIGGNGDDTFRGGAGNDVLVGNKGRDVFEFGLGG 556
Query: 314 YLYKI-YRFENAIIVYDANEHKQDFLSDV 341
+I Y A + + + FL+ +
Sbjct: 557 GRDQINYGVAAAKMAQYSKGDQIRFLAGI 585
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV----------VGSSG 276
G+D++ L + G + L +S+ ++ A + SV VG G
Sbjct: 730 GNDVI-LKHVNGSDSI--LIQNWFSAASAQVGSVIFADGSSWTSVQISQWANGLHVGGDG 786
Query: 277 NDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
ND++IG +A++ +GNDV +G +G DT A +Y + ++
Sbjct: 787 NDILIGGNASDTLQGGAGNDVLISVGGSAVLEGGTGNDTLKGGAGRDIYVFNLGDGNDVI 846
Query: 328 YDAN 331
+ +
Sbjct: 847 INNS 850
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 32/155 (20%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ + G D L GG N + + G + N ++ +S+ G +G D++
Sbjct: 1078 TLTGTEGKDTL----TGGKGNDVIFGLGGDDVLIGADGNDSLFGGAGNDSLNGGNGADLL 1133
Query: 281 IGNSANN-----------------VFFESSGND-----------VFDGSSGLDTFFYYAP 312
G ++ +GND V +G +G DT
Sbjct: 1134 EGGDGDDVIVGGRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNVLEGGTGNDTLTGSFA 1193
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+Y + ++ D D + +RF
Sbjct: 1194 RDVYLFNLGDGQDLIIDKAREATDSDVFRDEIRFG 1228
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Query: 211 VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQ 264
I+ GGDD+L + +L GG N LN + + + G + + I
Sbjct: 1086 DTLTGGKGNDVIFGLGGDDVLIGADGNDSLFGGAGND-SLNGGNGADLLEGGDGDDVIVG 1144
Query: 265 HTV--------IESVVGSSGNDVVIG--NSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+++ G +GND + NNV +GND GS D + +
Sbjct: 1145 GRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNVLEGGTGNDTLTGSFARDVYLFNLGDG 1204
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDV 341
I D + F +D+
Sbjct: 1205 QDLIIDKAREATDSDVFRDEIRFGADI 1231
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N + +++ G +GNDV+I + V +GND G +G D + +
Sbjct: 783 GGDGNDILIGGNASDTLQGGAGNDVLISVGGSAVLEGGTGNDTLKGGAGRDIYVFNLGDG 842
Query: 315 LYKIYRFENAIIV 327
I + V
Sbjct: 843 NDVIINNSVNVSV 855
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ D + G + ++ + GND G +G D A N + A
Sbjct: 1292 LVGTELGDTLRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGL-FGEAGNDTLRGGA 1350
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + L D D + + ++ + L G D + +G
Sbjct: 1351 GNDVLNGGDGADLLEGGDGD-DVIVGGRTDGTDWREERDTLRGGAGNDQLTAAW----YG 1405
Query: 391 LSE 393
+
Sbjct: 1406 WNN 1408
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ D + G + ++ + GND G +G D A N + A
Sbjct: 1523 LVGTELGDTLRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGL-FGEDGNDTLRGGA 1581
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + L D D + + ++ + L G D + +G
Sbjct: 1582 GNDVLNGGDGADLLEGGDGD-DVIVGGRTDGTDWREERDTLRGGAGNDQLTAAW----YG 1636
Query: 391 LSE 393
+
Sbjct: 1637 WNN 1639
Score = 44.7 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 252 SIGGYEKNMTIAQHTV-----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G+ + A ++ ++ GND V G++ ++V G V +G G DT
Sbjct: 618 DKMGWAGEVVFADGVRWSAADLQKLIVVGGNDTVKGSAGDDVLVSVGGTVVLEGGKGNDT 677
Query: 307 FFYYAPSYLYKIYRFENAIIVYDAN 331
A +Y + ++ + +
Sbjct: 678 LKGGAAHDIYVFNLGDGNDVIINNS 702
Score = 44.3 bits (103), Expect = 0.074, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ D + G + ++ + GND G +G D A F
Sbjct: 1754 LVGTELGDTLRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDD----GLFGEDGNDTLR 1809
Query: 331 NEHKQDFLSD 340
D L+
Sbjct: 1810 GGLGNDTLNG 1819
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 18/77 (23%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVF------------------DGSSGLDTFFYY 310
+ + G G D +IG N++ G+D +G G DT
Sbjct: 194 DKLKGWIGKDHLIGLGGNDILLGGDGDDTLQGGDGDDWLDGGSGRNVLEGGKGNDTLIGG 253
Query: 311 APSYLYKIYRFENAIIV 327
A + +Y + A ++
Sbjct: 254 ADADIYIFNLGDGADVI 270
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 18/76 (23%)
Query: 269 ESVVGSSGNDVVIGNSAN------------------NVFFESSGNDVFDGSSGLDTFFYY 310
+ ++G GND+++G + NV GND G + D + +
Sbjct: 203 DHLIGLGGNDILLGGDGDDTLQGGDGDDWLDGGSGRNVLEGGKGNDTLIGGADADIYIFN 262
Query: 311 APSYLYKIYRFENAII 326
I +
Sbjct: 263 LGDGADVIRETAGVDV 278
Score = 38.6 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 13/158 (8%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--GYEKNMTIAQHTVIESVVGSSGNDV 279
I +GG+D +L GG N DL G G + N T+ +++ G +GND
Sbjct: 1772 IQGNGGND----SLYGGNGN--DLLEGGAGDDGLFGEDGNDTLRGGLGNDTLNGGNGNDT 1825
Query: 280 --VIGNSANNVFFESSGNDVFDGSSGLD--TFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
++ +S G D + G+D ++ + ++ V N
Sbjct: 1826 YRFGRGDGADLVQDSGGQDALEFDKGIDASQLWFRKQNNSLEVSVIGGGDKVVVDNWFGN 1885
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+E +R D + + Q + A
Sbjct: 1886 AANQ-LETIRSGDGKALAASQVQALVTAMAAFNPPAAG 1922
Score = 37.8 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 60/230 (26%), Gaps = 69/230 (30%)
Query: 200 GSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN++ + T+ G D+ L G I+
Sbjct: 801 GGAGNDVLISVGGSAVLEGGTGNDTLKGGAGRDIYVFNLGDGNDVIIN-----------N 849
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANN----------------------------- 287
N+++ + I VG S +D+V+ + N+
Sbjct: 850 SVNVSVGHQSEIRLGVGISVSDIVVVRAGNDVILKHVNGSDSILIQNWFGAVSAQVGSVI 909
Query: 288 ------------------VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V +G+D+ G +G D A + I + +
Sbjct: 910 FADGASWTSTQITQWASGVLTGGAGDDLLQGGAGNDVLDGGAGNDTL-IGLGGDDTLKGG 968
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D + + F + ++ + S + G ++
Sbjct: 969 TGNDVLDGGAGRDVYIFNLG-------DGQDVIRFDGSNAAVAWSAGDEI 1011
Score = 37.8 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 23/153 (15%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF--ESSGNDVFDGS--------- 301
+ G N T+ ++ G +GNDV++GN +VF G D +
Sbjct: 514 LDGGAGNDTLIGGNGDDTFRGGAGNDVLVGNKGRDVFEFGLGGGRDQINYGVAAAKMAQY 573
Query: 302 SGLDTFFYYAP--SYLYKIYRFENAIIVYDAN--------EHKQDFLSDVERLRFADQCI 351
S D + A + ++ + N +++ AN D + + FAD
Sbjct: 574 SKGDQIRFLAGIKAADVRVLKSGNDLVLMLANGQDGITIKNGAVDKMGWAGEVVFADGVR 633
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
S Q+ I+ + + G DV S+
Sbjct: 634 WSAADLQKLIVVG--GNDTVKGSAGDDVLVSVG 664
>gi|9082310|gb|AAF82802.1|AF277294_1 matrix metalloproteinase-like protein [Gnathostoma spinigerum]
Length = 244
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 42/171 (24%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR------------YDSRYF 99
+ + + ALG W+KV+ LTFE T+ D++F + G+ P RY
Sbjct: 71 RRIIKDALGTWTKVLPLTFEFTTGKGDLEFRFGSGGHFGCPWPFDGPGNLLAHAQPPRYG 130
Query: 100 MEINFDKADV---WRYGIGKG------TILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
++D ++ W L +HE+GH LGL H +
Sbjct: 131 AFTHYDDDELFGEWTQQYIDNGRRPFMWDLRSLVIHEVGHYLGLGHSPDRDD-------- 182
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+M Y M D + D F A P +D+ Q+I+GA G
Sbjct: 183 -----------IM-YPMYSDPIKDGKFV-PAKPSKNDVYVAQQIHGARNGR 220
>gi|332208030|ref|XP_003253099.1| PREDICTED: stromelysin-1 [Nomascus leucogenys]
Length = 477
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 52/190 (27%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 221 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 256
Query: 189 VAVQKIYGAP 198
+Q +YG P
Sbjct: 257 NGIQSLYGPP 266
>gi|298488801|ref|ZP_07006829.1| mannuronan C-5-epimerase, putative [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156719|gb|EFH97811.1| mannuronan C-5-epimerase, putative [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 1605
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G +G D + +
Sbjct: 1452 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGEDVLIGGSGADTLIGGTG 1509
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+ + ++NE L D+
Sbjct: 1510 ADRYVFNNSNETGLGGLRDI 1529
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 5/133 (3%)
Query: 232 DLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D T ++ I++ + ++ G E + ++++G G+D + G++ ++
Sbjct: 772 DATGASVADSFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIIN 831
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D G G DTF Y + Y+ Y A + DF +++ +
Sbjct: 832 GGAGRDALYGGDGADTFVYSTLTDSYRDYDAGG----LTATDTIYDFTPGQDKIDVSALG 887
Query: 351 IDSVNVKQRSILE 363
+ + L
Sbjct: 888 FLGLGNGEDHTLY 900
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + ++++ AS L G D+
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTG 1340
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GNDV+ GN+ + +G D+ +G + D A + L+ ++ Y
Sbjct: 541 DTLTGTDGNDVMNGNAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY 600
Query: 329 DANEHKQ-DFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYED 370
+A+ KQ D ++D +R+ + + + + + Y + D
Sbjct: 601 NASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 1223 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTE 1275
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + +GN +V+ GN++NNV ++G
Sbjct: 1276 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGA 1335
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 1336 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 1395
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 1396 NATGNTLDNLIYAGAGDNVMDGRDGN 1421
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 45/145 (31%), Gaps = 9/145 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA-QHTVIESVVGSSGNDVVIGN 283
G D L T +L ++ KN + + +++ G +G DV+IG
Sbjct: 1447 GSGLDTLKGTE--------NLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGEDVLIGG 1498
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
S + +G D + ++ +T + E + + + + D +
Sbjct: 1499 SGADTLIGGTGADRYVFNNSNETGLGGLRDIINGFKAAEGDKLDFTGFDARPDAFVFIGN 1558
Query: 344 LRFADQCIDSVNVKQRSILEYTASY 368
F+ + +
Sbjct: 1559 AAFSANNTGELRFADGVLYGNLDDN 1583
>gi|330943695|gb|EGH45989.1| calcium binding hemolysin protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 698
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 13/157 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y+ + +I SGG+D L + G ++ G N T+ +
Sbjct: 352 YETDDVINAGVGDDSISGSGGNDTL--SGEAGDD-----------TVSGGTGNDTLIGGS 398
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G G+D++ G N+ + +GNDV DG SG D Y +
Sbjct: 399 GADTLNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGNDLLNGGNGDDTYLFGKGSGQDR 458
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
VY ANE + D L V+ + + ++
Sbjct: 459 VYYANETRADKLDTVKLIDLNAGDVSLSRDGYDLVIR 495
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D +L G + I ++ G N T++ + ++++ G G+D + G + N+
Sbjct: 164 DQSLTGYAGDDIIDAGAGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTLNG 223
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+G+D+ DG +G D A Y + +Y ANE + L
Sbjct: 224 GTGDDILDGGAGNDLLNGGAGDDTYLFGKGSGQDSIYYANESRLGKL 270
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ + + G GND++ G + N++ GND+ DG +G D A
Sbjct: 2 TVSGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIGNDILDGGAGNDRLDGGA 61
Query: 312 PSYLYKIYRFENAIIV---YDANEHKQDFLS 339
Y + + Y+A K D +
Sbjct: 62 GDDAYLFGKGSGQDTIYYAYEARAGKVDTVK 92
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 5/149 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ ID ++ G + T++ +++ G+ GNDV+ G + ++V + G+D
Sbjct: 552 TSADDTIDAGAGDD-TVNGMAGSDTLSGGAGADTLNGNDGNDVLQGGADDDVLYGGDGSD 610
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE---HKQDFLSDVERLRFADQCIDS 353
V DG +G D A +Y + +Y ANE K D + + L +D +
Sbjct: 611 VLDGGAGNDRLDGGAGDDIYIFCKGAGQDSIYYANETRAGKMDTVKLTD-LNASDVSVTR 669
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + T +I D
Sbjct: 670 DGMDLFIRVNGTTDSLRVIYHFLGDATAG 698
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 41/193 (21%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ GG+D L L + G + N + T + + G GND+
Sbjct: 1 DTVSGGGGNDTL-------------LGGAGADRLNGDDGNDLLQGGTGNDILNGGIGNDI 47
Query: 280 VIGNSANNVFFESSGND-VFDG-SSGLDTFFY--------------------------YA 311
+ G + N+ +G+D G SG DT +Y A
Sbjct: 48 LDGGAGNDRLDGGAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDITISRDA 107
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ +I +++ V + ++R++FAD ++ + +L+ + + + L
Sbjct: 108 ADLIIRINDTTDSMQVLNHFAGDAATGYQIDRIQFADGSFWDQSIIKLQVLKGSDADQSL 167
Query: 372 IQVIGQDVFESMK 384
G D+ ++
Sbjct: 168 TGYAGDDIIDAGA 180
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 9/128 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRF 321
++V G GND ++G + + GND+ G +G D + ++
Sbjct: 1 DTVSGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIGNDILDGGAGNDRLDGG 60
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ--DV 379
QD + R ++ + S + + DLI I D
Sbjct: 61 AGDDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDITISRDAADLIIRINDTTDS 120
Query: 380 FESMKHFY 387
+ + HF
Sbjct: 121 MQVLNHFA 128
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + N ++ + + + G+D + G+ N+ +G+D G +G DT +
Sbjct: 340 LRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIGGSG 399
Query: 313 SYLYKIYRFEN 323
+ ++
Sbjct: 400 ADTLNGDDGDD 410
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 6/94 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + ++ + + + +G+D V G + N+ SG D G G D A
Sbjct: 158 LKGSDADQSLTGYAGDDIIDAGAGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAG 217
Query: 313 SYL------YKIYRFENAIIVYDANEHKQDFLSD 340
+ I + + +L
Sbjct: 218 NDTLNGGTGDDILDGGAGNDLLNGGAGDDTYLFG 251
>gi|90411764|ref|ZP_01219773.1| type I secretion target repeat protein [Photobacterium profundum
3TCK]
gi|90327326|gb|EAS43690.1| type I secretion target repeat protein [Photobacterium profundum
3TCK]
Length = 1573
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 74/205 (36%), Gaps = 8/205 (3%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS 252
G+ + +Y S T++ GDD L D + GG N I L + +
Sbjct: 243 GNGDDTLYGGSDNDTLLGSDGNDTLFGEDGDDTLLGELGDDIIDGGAGNDILLGDDGNDT 302
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N ++ +++ G GND + G++ +++ +G+D G G D A
Sbjct: 303 LIGGTGNDSLFGGLGTDTLSGGEGNDEIHGDTGDDIITGGAGDDFVLGGDGADVIEGGAG 362
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ L + + + N+ + D + + L A + L
Sbjct: 363 NDLLLGGDGSDNLSGDEGNDQLFGEVGD-DIITGGAGDDMVYGGLGNDQLVGGADNDQLF 421
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDI 397
G DV + + +EG DI
Sbjct: 422 GGEGNDVLDGGEGSDILHANEGHDI 446
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 63/193 (32%), Gaps = 6/193 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+Y G++ +DL L GG N + + G E N ++
Sbjct: 966 NDTITAGDGNDTVYGEAGNNTIDLGEGDNILYGGSGNDTAIAGSGADHLSGAEGNDNLSG 1025
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
I+++ G +G+D + G +++ GNDV G G D F N
Sbjct: 1026 GAGIDTIEGGAGSDTLSGGLGDDILLGGDGNDVLLGGDGEDKLFAGDGDDQL-FGGTGND 1084
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++ + + D + L A LE + L G D +
Sbjct: 1085 ELHANSGNNTLEGGDDDDTLYGAAGDDILRGDAGDDRLEGFDGNDTLEGGDGDDTLTAGS 1144
Query: 385 HFYEFGLSEGRDI 397
EG DI
Sbjct: 1145 GNDTLSGGEGDDI 1157
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 16/137 (11%)
Query: 199 KGSLGNNI-YKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KG G+++ Y T+Y G D L T G ++ G
Sbjct: 1321 KGGSGDDVLYGETGNDSLSGDTGADTLYGGSGSDTL--TGGSGAD-----------TLSG 1367
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N T+A +++ G GND + G+S N++ F SG+DV DG +G+D F + +
Sbjct: 1368 GDDNDTLAGGDNDDNLDGGIGNDTLYGDSGNDLLFGQSGDDVLDGGAGIDQLFAGSGNDT 1427
Query: 316 YKIYRFENAIIVYDANE 332
+ + I D +
Sbjct: 1428 LIFDKNDTNINGGDGFD 1444
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 51/163 (31%), Gaps = 5/163 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ TIY GDD++ D T+ G + +I G + TI
Sbjct: 768 NDTITSNAGNDTIYAGSGDDIINAGDGDDTIYGEAGSNQITAGSGADNIYGGINSDTIDA 827
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G+D + ++ SG+D+ G G D F A + +
Sbjct: 828 GDGNDQIFAGDGDDTINAGLGDDHIDAGSGDDLLKGGDGDDALFGGAGADTLIGGDGYDF 887
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ D N+ D D D + + I T
Sbjct: 888 LAGGDGNDTITDDGQDTVLGEGGDDTLTAAATGSHQIFGGTGD 930
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 6/171 (3%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ + G++ L D TL G + I + G++ N T+ +
Sbjct: 1079 GGTGNDELHANSGNNTLEGGDDDDTLYGAAGDDILRGDAGDDRLEGFDGNDTLEGGDGDD 1138
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ SGND + G +++ SGN++ DG +G DT A + N +
Sbjct: 1139 TLTAGSGNDTLSGGEGDDILSADSGNNILDGDAGNDTLTTGAGNDSLS-GGLGNDTLSAS 1197
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ++ D ++L + L + + L D
Sbjct: 1198 SGDNTLDGGEGNDKLTSGSGSDLLSGGQGADTLSAGSGNDTLSGGADNDKL 1248
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 18/186 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G + Y + I T+ GGDD L G + I
Sbjct: 878 TLIGGDGYDFLAGGDGNDTITDDGQDTVLGEGGDDTLTAAATGSHQ------------IF 925
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + T+ +++ G + D + G + ++ + GND G DT + A +
Sbjct: 926 GGTGDDTLIGSDQNDTLYGGADQDTIQGGAGDDSLYAGEGNDTITAGDGNDTVYGEAGNN 985
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ +N + N+ S + L A+ + +E A + L
Sbjct: 986 TIDLGEGDNILYGGSGNDTAIAG-SGADHLSGAEGNDNLSGGAGIDTIEGGAGSDTLSGG 1044
Query: 375 IGQDVF 380
+G D+
Sbjct: 1045 LGDDIL 1050
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 7/157 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D + GG + L + I G N + +++ G GND + G +++
Sbjct: 333 DTGDDIITGGAGDDFVLGGDGADVIEGGAGNDLLLGGDGSDNLSGDEGNDQLFGEVGDDI 392
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYL-------YKIYRFENAIIVYDANEHKQDFLSDV 341
+G+D+ G G D A + + E + I++ H
Sbjct: 393 ITGGAGDDMVYGGLGNDQLVGGADNDQLFGGEGNDVLDGGEGSDILHANEGHDIINAGAG 452
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ +A D ++ + Y + + + D
Sbjct: 453 DDFIYAGTGDDIIDGGTGNDTIYGETGNNTVTAGDGD 489
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 10/153 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L GG N I ++ G N T+ + +++ GND + G S ++V +
Sbjct: 1272 DDQLDGGSGNDILSGGSGNDTLKGDIGNDTLKGDSGTDTLWAGEGNDTLKGGSGDDVLYG 1331
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+GND G +G DT + + S + + D L+ D
Sbjct: 1332 ETGNDSLSGDTGADTLYGGSGSDTLT----GGSGADTLSGGDDNDTLAG------GDNDD 1381
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L + + L G DV +
Sbjct: 1382 NLDGGIGNDTLYGDSGNDLLFGQSGDDVLDGGA 1414
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 6/163 (3%)
Query: 225 SGGDDLLD----LTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDV 279
G+D LD ++ + G L + S I GG N TI + +++ SG+D+
Sbjct: 729 GDGNDSLDGGLGVSQLYGDAGNDTLVSADESDILGGGSGNDTITSNAGNDTIYAGSGDDI 788
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ ++ + +G++ SG D + S + I D ++ L
Sbjct: 789 INAGDGDDTIYGEAGSNQITAGSGADNIYGGINSDTIDAGDGNDQIFAGDGDDTINAGLG 848
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + + L A + LI G D
Sbjct: 849 D-DHIDAGSGDDLLKGGDGDDALFGGAGADTLIGGDGYDFLAG 890
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 6/183 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKN 259
T+ S GD+ LD L G + + + ++ N
Sbjct: 1177 TTGAGNDSLSGGLGNDTLSASSGDNTLDGGEGNDKLTSGSGSDLLSGGQGADTLSAGSGN 1236
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T++ + + G SGNDV+ G+ ++ + + +D DG SG D + + K
Sbjct: 1237 DTLSGGADNDKLYGGSGNDVLTGDDGDDKLYGQNNDDQLDGGSGNDILSGGSGNDTLK-G 1295
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
N + D+ + L+ L + L G D
Sbjct: 1296 DIGNDTLKGDSGTDTLWAGEGNDTLKGGSGDDVLYGETGNDSLSGDTGADTLYGGSGSDT 1355
Query: 380 FES 382
Sbjct: 1356 LTG 1358
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 7/162 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND 278
T++ GDDLL+ G +L + G N ++ + +VG GND
Sbjct: 661 DTLFAGQGDDLLE-----GNSGDDNLQGAEGEDTLLGGSGNDSLDGGDGNDILVGGVGND 715
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
++G N++ GND DG G+ + A + + E+ I+ +
Sbjct: 716 TLLGGEGNDLLAGGDGNDSLDGGLGVSQLYGDAGNDTL-VSADESDILGGGSGNDTITSN 774
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + + A + G D
Sbjct: 775 AGNDTIYAGSGDDIINAGDGDDTIYGEAGSNQITAGSGADNI 816
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 23/190 (12%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGD-------------DLLDLTLIGGVKNYIDLNTESW 250
+ + + T+ D G+ ++ D T+ GG N +
Sbjct: 151 DITFTATEVGTEQLIAFTLVDPDGNAITDIESVEFIANNIYDDTISGGSGNDSLFGQQGS 210
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+I G N I +++ G G+DV++G + ++ + S ND GS G DT F
Sbjct: 211 DTIYGGTGNDFIDGDINDDTLYGDEGDDVLVGGNGDDTLYGGSDNDTLLGSDGNDTLFGE 270
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ + + D + + L D + L +
Sbjct: 271 DGDD----------TLLGELGDDIIDGGAGNDILLGDDGNDTLIGGTGNDSLFGGLGTDT 320
Query: 371 LIQVIGQDVF 380
L G D
Sbjct: 321 LSGGEGNDEI 330
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 60/197 (30%), Gaps = 16/197 (8%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWS 251
G+ + IY T+Y G+D + D G N I+ ++
Sbjct: 468 GTGNDTIYGETGNNTVTAGDGDDTVYTDTGNDTINTGSGHDTIFAGAGDNIINTGIDND- 526
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I E N TI + V GN+ + ++ F SGND +G D F A
Sbjct: 527 TIYSAEGNDTIDAGDGDDVVYAGDGNNTITSGLGDDEVFTGSGNDSIHSGTGNDEVFAGA 586
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ IY E A VY D L L D S L
Sbjct: 587 GTD--TIYAGEGADTVYAGA--GDDTLYGEQGNNALYGEDGDDTITAGTNSSSLFGGQGD 642
Query: 369 EDLIQVIGQDVFESMKH 385
+ L I D
Sbjct: 643 DTLTGSIESDALYGGSD 659
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 71/220 (32%), Gaps = 22/220 (10%)
Query: 194 IYGAPKGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDL 245
+YGA G++I + + + T+ GDD L + TL GG + I
Sbjct: 1104 LYGA----AGDDILRGDAGDDRLEGFDGNDTLEGGDGDDTLTAGSGNDTLSGGEGDDILS 1159
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND--------- 296
+ + G N T+ +S+ G GND + +S +N GND
Sbjct: 1160 ADSGNNILDGDAGNDTLTTGAGNDSLSGGLGNDTLSASSGDNTLDGGEGNDKLTSGSGSD 1219
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G G DT + + + + N+ D + +
Sbjct: 1220 LLSGGQGADTLSAGSGNDTLSGGADNDKLYGGSGNDVLTGDDGDDKLYGQNNDDQLDGGS 1279
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
IL + + L IG D + EG D
Sbjct: 1280 GN-DILSGGSGNDTLKGDIGNDTLKGDSGTDTLWAGEGND 1318
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 60/191 (31%), Gaps = 10/191 (5%)
Query: 196 GAPKGSLG---NNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+ + + G +NIY I+ GDD ++ G ++ID +
Sbjct: 803 GSNQITAGSGADNIYGGINSDTIDAGDGNDQIFAGDGDDTIN---AGLGDDHIDAGSGDD 859
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + + + ++++G G D + G N+ G D G G DT
Sbjct: 860 -LLKGGDGDDALFGGAGADTLIGGDGYDFLAGGDGNDTIT-DDGQDTVLGEGGDDTLTAA 917
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + ++ +D + ++ + + +
Sbjct: 918 ATGSHQIFGGTGDDTLIGSDQNDTLYGGADQDTIQGGAGDDSLYAGEGNDTITAGDGNDT 977
Query: 371 LIQVIGQDVFE 381
+ G + +
Sbjct: 978 VYGEAGNNTID 988
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 7/161 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
K T++ G+D L GG + + S+ G T+ + +
Sbjct: 1299 NDTLKGDSGTDTLWAGEGNDTLK----GGSGDDVLYGETGNDSLSGDTGADTLYGGSGSD 1354
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGN-DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++ G SG D + G N+ N D DG G DT + + + L + + ++
Sbjct: 1355 TLTGGSGADTLSGGDDNDTL-AGGDNDDNLDGGIGNDTLYGDSGNDLL-FGQSGDDVLDG 1412
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A + S + L F + +L +
Sbjct: 1413 GAGIDQLFAGSGNDTLIFDKNDTNINGGDGFDLLSVGSDNN 1453
>gi|221108941|ref|XP_002154985.1| PREDICTED: similar to matrix metalloproteinase 14 [Hydra
magnipapillata]
Length = 298
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 61/191 (31%), Gaps = 44/191 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
WS + YK T + + A +WS+V LTF +D++
Sbjct: 88 WSKTKLTYKIINHTPDLGL-------AETARIMQEAFNKWSQVTPLTFTRAQGTTDLEID 140
Query: 83 SSN-------NGYVCTPRYDSRYFMEI----NFDKADVWRYGIGKGTILSHNALHEIGHA 131
+N + + F +FD + + GT L A HE GHA
Sbjct: 141 FANLRHSSCSWDFDGPGGVLAHAFYPPDGRAHFDDDEHFTDKKSTGTNLLWVAAHEFGHA 200
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+GL H S S+M F D +DI +
Sbjct: 201 IGLTHS-------------------SVQGSLM--FPYYQGYQD-----PFVLHENDISRI 234
Query: 192 QKIYGAPKGSL 202
Q++YG G+
Sbjct: 235 QQLYGGRGGAT 245
>gi|163796168|ref|ZP_02190130.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
gi|159178627|gb|EDP63167.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
Length = 658
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 37/88 (42%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IGG + + +++ G +G+DV+ G N+ +G+D+ G G D
Sbjct: 515 DIGGTGNGDLLYGNQGADTLSGGNGDDVLFGGQGNDRLDGGAGDDILLGGVGDDYLIGGN 574
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ ++ I + V D N D ++
Sbjct: 575 GADVFVIDSGGGSDTVADLNLQHGDRIA 602
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 60/168 (35%), Gaps = 3/168 (1%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ F + I +G +D + N L + ++ ++ + ++VV S
Sbjct: 376 AGFDRVIALTGRNDAIAEVSGTNNANGWRLPADDFADYSDTADSLLVVALDGADTVVAGS 435
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY---DANE 332
G+D+V G ++V +G+D G +G D AP+ + ++ V D
Sbjct: 436 GDDLVAGGGGDDVIDGGAGSDTLLGGTGDDLIIGGAPAEGGSVEDGNASVAVDLGVDVRV 495
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
S VE + ID +L + L G DV
Sbjct: 496 IGVRLSSGVETEVSTGRSIDIGGTGNGDLLYGNQGADTLSGGNGDDVL 543
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 50/155 (32%), Gaps = 7/155 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ GDDL+ + D N +G + + + + +E+ V + +
Sbjct: 456 DTLLGGTGDDLIIGGAPAEGGSVEDGNASVAVDLGVDVRVIGVRLSSGVETEVSTGRSID 515
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G ++ + + G D G +G D F + A D+L
Sbjct: 516 IGGTGNGDLLYGNQGADTLSGGNGDDVLFGGQGNDRLD----GGAGDDILLGGVGDDYLI 571
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
AD + ++ + + D I +
Sbjct: 572 GGN---GADVFVIDSGGGSDTVADLNLQHGDRIAL 603
>gi|56681786|gb|AAW21429.1| leukotoxin A [Pasteurellaceae bacterium I11]
Length = 392
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 233 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 292
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 293 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 329
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 221 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---ILDGGNGDDF 277
Query: 328 YDANEHKQDFLSD 340
D D L
Sbjct: 278 IDGG-KGNDLLHG 289
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 6/114 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 219 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDILDGGNG 274
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+D + G N++ G+D+F G D + + +
Sbjct: 275 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDLTF 328
>gi|332710978|ref|ZP_08430914.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332350292|gb|EGJ29896.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 236
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 50/161 (31%), Gaps = 25/161 (15%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ ++ + T++ G+D L G N
Sbjct: 65 DTLWGENGNDQLMGGSGNDTLWGEDGNDTL----------------------WGENGNDQ 102
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + ++G SGND + G N+ + SGND G G D
Sbjct: 103 LIGGNGSDQLIGGSGNDTLWGEDGNDTLWGGSGNDTLQGQDGNDQLIGDGGFNDLIGGSG 162
Query: 322 ENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ ++ DF ++R++ +++ + + +
Sbjct: 163 ADQFVLSTEGFTTITDFEDGIDRIQVSNRTFNDLGFILSGL 203
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 58/172 (33%), Gaps = 9/172 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDL--NTESWSSIG-----GYEKNMTIAQHTVIE 269
T++ G+D L G I N W G G N + + +
Sbjct: 26 DGNDTLWGQDGNDQL--IGGNGSDQLIGGFGNDTLWGEDGNDTLWGENGNDQLMGGSGND 83
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ +G+D G SG DT + + + + D
Sbjct: 84 TLWGEDGNDTLWGENGNDQLIGGNGSDQLIGGSGNDTLWGEDGNDTLWGGSGNDTLQGQD 143
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N+ + + + ++ + + + D IQV + +
Sbjct: 144 GNDQLIGDGGFNDLIGGSGADQFVLSTEGFTTITDFEDGIDRIQVSNRTFND 195
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
GY+ N T+ + ++G +G+D +IG N+ + GND G +G D + +
Sbjct: 24 GYDGNDTLWGQDGNDQLIGGNGSDQLIGGFGNDTLWGEDGNDTLWGENGNDQLMGGSGND 83
Query: 315 LYKIYRFENAIIVYDANE-----HKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + N+ + D L S + L D L+
Sbjct: 84 TLWGEDGNDTLWGENGNDQLIGGNGSDQLIGGSGNDTLWGEDGNDTLWGGSGNDTLQGQD 143
Query: 367 SYEDLIQVIGQD 378
+ LI G +
Sbjct: 144 GNDQLIGDGGFN 155
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 1/132 (0%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+S+ G N + + +++ G GND +IG + ++ GND G G DT +
Sbjct: 11 NSLIGTANNDMMWGYDGNDTLWGQDGNDQLIGGNGSDQLIGGFGNDTLWGEDGNDTLWGE 70
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + D N+ + ++L + + L +
Sbjct: 71 NGNDQLMGGSGNDTLWGEDGNDTLWGENGN-DQLIGGNGSDQLIGGSGNDTLWGEDGNDT 129
Query: 371 LIQVIGQDVFES 382
L G D +
Sbjct: 130 LWGGSGNDTLQG 141
>gi|331010176|gb|EGH90232.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 1312
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N+T T E+ G+ G+D ++G ++ +G D+ +G +G D + +
Sbjct: 786 VGNVTPGVLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGA 845
Query: 314 YLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ ++ YDA D + D
Sbjct: 846 DTFVYSTLTDSYRDYDAGGLTATDTIYDF 874
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G G+D + G++ ++ +G D G G DTF Y + Y+ Y
Sbjct: 810 DTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSTLTDSYRDYDAGG----L 865
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A + DF +++ + + + L
Sbjct: 866 TATDTIYDFTPGQDKIDVSALGFLGLGNGEDHTLY 900
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GNDV+ GN+ + +G D+ +G + D A + L+ ++ Y
Sbjct: 541 DTLTGTDGNDVMNGNAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY 600
Query: 329 DANEHKQ-DFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYED 370
+A+ KQ D ++D +R+ + + + + + Y + D
Sbjct: 601 NASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVN 355
+ ++VE L +
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINGT 1312
>gi|56695277|ref|YP_165625.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56677014|gb|AAV93680.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 719
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + G G D ++GN+ + + +D DG +G D +
Sbjct: 617 VTGSSHDDVLIGDDGRNVLRGLYGEDTLLGNAGVDRLHGGASDDFLDGGAGWDFAIFDGN 676
Query: 313 SYLYKIYRFENAIIVYDANEH--KQDFLSDVERLRFADQCIDS 353
Y + R +V + D L ++E ++F D +
Sbjct: 677 RDDYNVTRQGERTLVERVSPGNEGIDTLVNIEVIQFQDDFLYL 719
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 8/164 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSI--GGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D +D + ++ID + G I + +E+V GSS D ++G+
Sbjct: 413 GSDTVDGGAGNDMVSFIDHRQAVRVDLSEGRVTSGRDINHLSNVENVTGSSFADYIVGDD 472
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------DFL 338
+N + D F GS G D + + + A+ V Q D
Sbjct: 473 GDNRLRGAGSYDWFIGSDGADFYDGGSGRDMVSYVSSSGAVQVDLTRGRGQGGMAEGDRY 532
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ER+ + + L SY+ + G+D ++
Sbjct: 533 QSIERVTGSSFEDHLTGDAGDNDLRGLGSYDWFVGTAGRDRYDG 576
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 54/158 (34%), Gaps = 14/158 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ GND++ G++ NN F G+D G DT A + + A+ V +
Sbjct: 384 TEGNDLLSGDAGNNRIFARDGDDWVSPGIGSDTVDGGAGNDMVSFIDHRQAVRVDLSEGR 443
Query: 334 KQ-----DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ LS+VE + + V + L SY+ I G FY+
Sbjct: 444 VTSGRDINHLSNVENVTGSSFADYIVGDDGDNRLRGAGSYDWFIGSDG-------ADFYD 496
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
G GRD+ DL G A Y
Sbjct: 497 GGS--GRDMVSYVSSSGAVQVDLTRGRGQGGMAEGDRY 532
>gi|329848567|ref|ZP_08263595.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843630|gb|EGF93199.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 998
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 53/158 (33%), Gaps = 20/158 (12%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GND V GN AN+ ++GND DG G DT A Y + ++I+
Sbjct: 493 LFGGGGNDTVNGNGANDRLVGNAGNDRLDGGVGNDTMEGGAGDDTYYVDATTDSIVELTN 552
Query: 331 NEHKQDFLSDVERLRFA------------------DQCIDSVNVKQRSILEYTASYEDLI 372
F S L F Q + L+ A+ + L
Sbjct: 553 QGFDSAFSSATFSLAFTFIDNLYLTGSANINGTGNGQANLITGTVGNNKLDGGANNDTLN 612
Query: 373 QVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+G D V ++ +EG D + + S
Sbjct: 613 GGMGDDTYVISNVGDVINENANEGTDTVESAITFTLSN 650
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 74/215 (34%), Gaps = 17/215 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG------GVKNYIDLNTESWSS 252
G+ GNNI + + + G+D ++ G + +N+ S
Sbjct: 666 TGNAGNNI------LTGNTGLNVLTGGAGNDTYNIQNTGDNVVEAANEGTDLINSTVTYS 719
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + G+ +++ GN ANNV S ND G +G DT+ A
Sbjct: 720 LSGRQVENLTLTGSAIVNATGNGLANILTGNGANNVLDGGSNNDTMAGGAGNDTYLISAV 779
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDL 371
+ + N I + ++VE + I++ ++L L
Sbjct: 780 GDV--VTENPNEGIDTIQSSFTTTLGANVENVTLNGAADINATGNALNNVLSGNYGINVL 837
Query: 372 IQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
G D ++ G D+ F S Y
Sbjct: 838 TGGAGNDTYYIQNAGDNVVEVSGGGSDVIFSSVTY 872
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 20/181 (11%)
Query: 195 YGAP--KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
YG G GN+ Y I+ + + GG D++ V ++L
Sbjct: 832 YGINVLTGGAGNDTYYIQNAGDNVVEVS----GGGSDVI----FSSVTYSLNLRYAE--- 880
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I + + G+S + + GN +N+ G D G G D F + A
Sbjct: 881 -------TLILNGSDNVNATGNSLGNTLGGNFGSNIINGKGGADNLSGGFGADIFLFDAN 933
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S I F A +++V + + +I A+ D++
Sbjct: 934 SGTDTITDFSAAQNDSINIAAYTGGVANVGLVAQNGISVLITLGGGNTITVNNATQADVL 993
Query: 373 Q 373
Sbjct: 994 A 994
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 66/217 (30%), Gaps = 10/217 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G+D ++ +G V + N I + + T
Sbjct: 751 GANNVLDGGSNNDTMAGGAGNDTYLISAVGDVVTE-NPNEG----IDTIQSSFTTTLGAN 805
Query: 268 IESVVGSSGNDV-VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E+V + D+ GN+ NNV + G +V G +G DT++ + +
Sbjct: 806 VENVTLNGAADINATGNALNNVLSGNYGINVLTGGAGNDTYYIQNAGDNVVEVSGGGSDV 865
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MK 384
++ + + + + +++ + L + G D
Sbjct: 866 IFSSVTYSLNLRYAETLILNGSDNVNATGNSLGNTLGGNFGSNIINGKGGADNLSGGFGA 925
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ F + G D + D + + A
Sbjct: 926 DIFLFDANSGTDTI--TDFSAAQNDSINIAAYTGGVA 960
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 81/244 (33%), Gaps = 20/244 (8%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIY---GAPKGSLGNN----IYKIEVQQKDSPFI--QT 221
+ + + + +Y A GN I K T
Sbjct: 551 TNQGFDSAFSSATFSLAFTFIDNLYLTGSANINGTGNGQANLITGTVGNNKLDGGANNDT 610
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWS-------SIGGYEKNMTIAQHTVIESVVGS 274
+ GDD ++ +G V N + N + + ++ +N+T+ T I + G+
Sbjct: 611 LNGGMGDDTYVISNVGDVINE-NANEGTDTVESAITFTLSNVLENLTLIGTTDI-NGTGN 668
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GN+++ GN+ NV +GND ++ + D A I + E+
Sbjct: 669 AGNNILTGNTGLNVLTGGAGNDTYNIQNTGDNVVEAANEGTDLINSTVTYSLSGRQVENL 728
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLS 392
S + ++L+ ++ + + G D + ++ +
Sbjct: 729 TLTGSAIVNATGNGLANILTGNGANNVLDGGSNNDTMAGGAGNDTYLISAVGDVVTENPN 788
Query: 393 EGRD 396
EG D
Sbjct: 789 EGID 792
>gi|4104351|gb|AAD02005.1| S-layer-RTX protein [Campylobacter rectus]
Length = 1123
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 64/203 (31%), Gaps = 20/203 (9%)
Query: 187 DIVAVQKIYGAPKGSLGNNIY----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
DI K A + Y + + IY +GGDD + G N
Sbjct: 487 DIEKSIKTVFAATEPTDDADYIQGTQEADIIRAKGGDDVIYGNGGDDEI----YGDEGND 542
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I E + G + I +++ G+ G D + GN ++ G+D+ G
Sbjct: 543 IIHGNEGADKLFGGAGDDAIYGGEGNDTIEGNEGKDKIYGNDGDDTIKGGEGDDILKGEG 602
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + F N D + E D+++ + +
Sbjct: 603 GNDTIYGEGGKDN----IFGNEGDDILKGGGDDDKIYGGE-------GKDTIDGEAGNDT 651
Query: 363 EYTASYEDLIQVIGQDVFESMKH 385
Y +D I G+ E H
Sbjct: 652 LYGNDGDDTIDG-GEGNDEIYGH 673
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 77/192 (40%), Gaps = 15/192 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I GG+D +D +GG + I G + N TI + ++G +G+D +
Sbjct: 289 IDAKGGNDFVD--GLGGDDE---IYGGEGKDRITGGDGNDTIYGDGGDDEIMGDAGDDTL 343
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----DANEHKQD 336
G N++ F + GND G G D + L +A+++ D +++
Sbjct: 344 YGGDGNDIIFGNGGNDTIYGGKGNDKIYGELNDKLLDGGEGIDALLLTGSQIDLGAVQKN 403
Query: 337 FLSDVERLRFADQCID---SVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--FYEFGL 391
+ + E L N+ +++L T++ + ++++ G + + F
Sbjct: 404 KIKNFEILDLNKGSYIGMVLKNLTPQNVLNITSNKDTILKISGGNKDTVILDKKFTASAD 463
Query: 392 SEGRDITFDSYL 403
+ G D ++ Y
Sbjct: 464 TSGLDANYNRYE 475
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 75/234 (32%), Gaps = 33/234 (14%)
Query: 203 GNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
+ IY E + IY + GDD + D L G N +I G
Sbjct: 559 DDAIYGGEGNDTIEGNEGKDKIYGNDGDDTIKGGEGDDILKGEGGNDTIYGEGGKDNIFG 618
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + + + + G G D + G + N+ + + G+D DG G D + +
Sbjct: 619 NEGDDILKGGGDDDKIYGGEGKDTIDGEAGNDTLYGNDGDDTIDGGEGNDEIYGHKGKDT 678
Query: 316 YKIYRFENAIIVY----------------------DANEHKQDFLSDVERLRFADQCIDS 353
K ++ I D N + D + + E L ++
Sbjct: 679 LKGGEGDDKIYGELSDTLLDGGEGVDTLILEDKEIDFNTLQADAIKNFEILDLGSGNSNA 738
Query: 354 VNVKQRSI--LEYTASYEDLIQVIGQDVFESMKH--FYEFGLSEGRDITFDSYL 403
++ S + S +D I I D + F + G D ++ Y
Sbjct: 739 ATLRNLSPQNISKLTSNKDTILKINGDDKDIAVLSGFTASADTNGLDANYNRYE 792
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 66/215 (30%), Gaps = 44/215 (20%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ IY + +Y G+D L GG N + E +I G E N T+
Sbjct: 849 DDTIYG-------NDGNDALYGGKGEDKL----YGGADNDVIYGDEGDDTIYGNEGNDTL 897
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFES---------------------------SGN 295
+ + G GND + G + NN + + +GN
Sbjct: 898 YGGDGDDEIYGGEGNDEIEGGAGNNTIYGNEGDDNIYGGGDDDTIDGGDGNDFLYGDNGN 957
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAII-----VYDANEHKQDFLSDVERLRF-ADQ 349
D +G SG DT + ++ I D L E + F A +
Sbjct: 958 DTIEGGSGNDTIKGSYGDDHIEGGEGDDKIYGELNDTLLDGGEGYDSLYFNEDVDFDAIR 1017
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + L + +D +++ +
Sbjct: 1018 DTLNQKISNFEQLHLGYTGDDTVKLNNMTAADIFA 1052
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ S + I + + G+D+V GN ++ + + GND G G D
Sbjct: 811 TAFLSDQPTDNADYIQGTQGADIIRAKGGDDIVYGNDGDDTIYGNDGNDALYGGKGEDKL 870
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A + + IY E +Y + + D + + + D + + Y
Sbjct: 871 YGGADNDV--IYGDEGDDTIYGNEGNDTLYGGDGDDEIYGGEGNDEIEGGAGNNTIYGNE 928
Query: 368 YED 370
+D
Sbjct: 929 GDD 931
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 23/196 (11%)
Query: 194 IYGAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+YG G + IY E + TIY + GDD + GG + +
Sbjct: 897 LYG---GDGDDEIYGGEGNDEIEGGAGNNTIYGNEGDDNI----YGGGDDDTIDGGDGND 949
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N TI + +++ GS G+D + G ++ + + + DG G D+ ++
Sbjct: 950 FLYGDNGNDTIEGGSGNDTIKGSYGDDHIEGGEGDDKIYGELNDTLLDGGEGYDSLYFNE 1009
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYE 369
I N +S+ E+L + +N + + +
Sbjct: 1010 DVDFDAIRDTLNQ------------KISNFEQLHLGYTGDDTVKLNNMTAADIFAMTDNK 1057
Query: 370 DLIQVIGQDVFESMKH 385
D I I D +S+
Sbjct: 1058 DTILKIKGDKKDSVGL 1073
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 24/88 (27%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G +K I + V G G+D + G + GND G G D A
Sbjct: 280 IRGTDKKDFIDAKGGNDFVDGLGGDDEIYGGEGKDRITGGDGNDTIYGDGGDDEIMGDAG 339
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ D +
Sbjct: 340 DDTL----YGGDGNDIIFGNGGNDTIYG 363
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 15/121 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + + GND V G ++ + G D G G DT +
Sbjct: 271 IVGTDGTDHIRGTDKKDFIDAKGGNDFVDGLGGDDEIYGGEGKDRITGGDGNDTIYGDGG 330
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED 370
+ D L + + F + D++ + + Y +
Sbjct: 331 DD-------------EIMGDAGDDTLYGGDGNDIIFGNGGNDTIYGGKGNDKIYGELNDK 377
Query: 371 L 371
L
Sbjct: 378 L 378
>gi|71275638|ref|ZP_00651923.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Xylella fastidiosa Dixon]
gi|71897818|ref|ZP_00680044.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Xylella fastidiosa Ann-1]
gi|71163529|gb|EAO13246.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Xylella fastidiosa Dixon]
gi|71732373|gb|EAO34427.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Xylella fastidiosa Ann-1]
Length = 1814
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D DL N L + G N T+ +++ G +GND + G
Sbjct: 925 GSDAADLLFGDAGANL--LRGGGGDDVLSGGAGNDTLYGGDGNDALYGDAGNDTLYGGVG 982
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFLSDVERL 344
N++ +G+D+ DGS G + A + + K+ Y + ++ + + D + +
Sbjct: 983 NDLLLGGAGDDLLDGSEGSNRLEGGAGNDVLKVAYWSTDNVLNGGSGDDLLDGSAYGDTY 1042
Query: 345 RF 346
F
Sbjct: 1043 LF 1044
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ +++ G GND + G++ N+ + GND+ G +G D
Sbjct: 941 LRGGGGDDVLSGGAGNDTLYGGDGNDALYGDAGNDTLYGGVGNDLLLGGAGDDLLDGSEG 1000
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S ++ ++ A + L+ D +D + ++ LI
Sbjct: 1001 SN--RLEGGAGNDVLKVAYWSTDNVLNGGS----GDDLLDGSAYGDTYLFNKGDGHDTLI 1054
Query: 373 QVIGQDVFESMKHFYEFGLS---EGRDITFD 400
+ G D + EG+D+ D
Sbjct: 1055 ERDGTDTLVFGAGIVASQVRRLHEGQDVVLD 1085
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G+ + + + + G G+D + G + +++ +GNDV DG G + A
Sbjct: 1457 TLQGWGSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLLLGDNGNDVLDGGEGHNRLEGGA 1516
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ K+ ++ V+ D L
Sbjct: 1517 GKDVLKVSTDGSSDNVFSGGT-GDDMLYG 1544
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 23/198 (11%)
Query: 225 SGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKN------MTIAQHTVIESVVGS 274
G D + LT G ++ ++ + + MT + +++ G
Sbjct: 1402 GNGHDSIRMKDWLTSDGEYNRTGNIEEILFADGTRWTGDTLGWREMTTFGTSGNDTLQGW 1461
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---AIIVYDAN 331
+D+++G + ++V G+D G +G D + + N D
Sbjct: 1462 GSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLLLGDNGNDVLDGGEGHNRLEGGAGKDVL 1521
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED----LIQVIGQDVF---ESMK 384
+ D SD F+ D + Y + D +++ G D E +
Sbjct: 1522 KVSTDGSSDN---VFSGGTGDDMLYGSVHSDTYLFNRGDGRDTIVEQGGFDKIVFGEEIA 1578
Query: 385 HFYEFGLSEGRDITFDSY 402
L EG+D+ D Y
Sbjct: 1579 VSDIHVLREGQDVVLDLY 1596
Score = 44.0 bits (102), Expect = 0.090, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 47/193 (24%), Gaps = 61/193 (31%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ L + Y T+ + G D L L+ +
Sbjct: 1027 GSGDDLLDGSAYGDTYLFNKGDGHDTLIERDGTDTLVFGAGIVASQVRRLHEGQDVVLDL 1086
Query: 256 YEKNMTI-------AQHTVIESV-------------------------VGSSGNDVVIGN 283
+I T +S +G+SGND + G
Sbjct: 1087 GNGQDSIRLKDWLTCYGTRNDSADIEQIVFADGTLWTPETLSSMGLTTLGTSGNDTLKGW 1146
Query: 284 SA------------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSY 314
+N +GND V +G SG DT + +
Sbjct: 1147 QGKDILLGGDGDDILDGGDGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDTLYGSGHAD 1206
Query: 315 LYKIYRFENAIIV 327
Y + + +
Sbjct: 1207 TYLFNKGDGHDTI 1219
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 12/85 (14%)
Query: 284 SANNVFFESSGNDVF-----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
A+N +GNDV G +G D + A S Y + + + +
Sbjct: 1313 EASNRLEGGAGNDVLKVASNSSDNVFSGGTGDDMLYGSAHSDTYLFNQGDGHDTIIEPG- 1371
Query: 333 HKQDFLSDVERLRFADQCIDSVNVK 357
D L E + D +
Sbjct: 1372 GSFDRLVFGEGITADDVRVVRQGQD 1396
Score = 41.3 bits (95), Expect = 0.57, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 271 VVGSSGNDVVIG---NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+VG G+DV+ +S++NV GND+ GSS DT+F+ I A +
Sbjct: 1661 LVGEDGDDVLKVSMFDSSDNVLVGCRGNDMLYGSSNSDTYFFDQGDGHDTIIEQGGADTL 1720
Score = 38.6 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 64/241 (26%), Gaps = 54/241 (22%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYI 243
+YG+ + Y TI + GG D + L G +
Sbjct: 1542 LYGSVHS----DTYLFNRGDGRD----TIVEQGGFDKIVFGEEIAVSDIHVLREGQDVVL 1593
Query: 244 DLNTESWS--------SIGGYEKNMTI-----AQHTVIE---------SVVGSSGNDVVI 281
DL S S G N I A TV +GS+ ND +
Sbjct: 1594 DLYNGYDSIRLKDWLTSDGTRNSNADIEQIVFADGTVWSGETLSSIGLKTLGSADNDTLN 1653
Query: 282 GNSANNVFFESSGNDVFD------------GSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ N+ G+DV G G D + + S Y + + +
Sbjct: 1654 CWNGRNILVGEDGDDVLKVSMFDSSDNVLVGCRGNDMLYGSSNSDTYFFDQGDGHDTI-- 1711
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D L E L + C + + + + ++
Sbjct: 1712 IEQGGADTLEFGEGLHREEACFTRSGDDLSILFNGSEDQVTVAGWFSAAAHQVESLVFQD 1771
Query: 390 G 390
G
Sbjct: 1772 G 1772
>gi|224043582|ref|XP_002198049.1| PREDICTED: matrix metalloproteinase 7 [Taeniopygia guttata]
Length = 263
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 60/195 (30%), Gaps = 49/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI-- 79
W + YK T + + + AL WS V L F H+DI
Sbjct: 103 WKKTHLTYKIVNYTPDLPRRKV-------DDAIKRALKVWSDVTPLQFRRIYMGHADIEI 155
Query: 80 KFI---------SSNNGYVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHEI 128
+F G ++ + + +FD + W + + L A HE
Sbjct: 156 RFARREHGDGAPFDGQGGTLAHAFEPGNGIGGDAHFDDDEKWS-DVDRDINLFLVAAHEF 214
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YP+Y Y P+ + D
Sbjct: 215 GHSLGLAHSNVRGALMYPLYR----------------YENPETFRLPE----------DD 248
Query: 188 IVAVQKIYGAPKGSL 202
+QK+YG +
Sbjct: 249 RRGIQKLYGKKSSNS 263
>gi|56681782|gb|AAW21427.1| leukotoxin A [Pasteurellaceae bacterium I9]
Length = 391
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 232 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKG 291
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + I+ D++ ++L F+D + + +
Sbjct: 292 DDIFVHRKGDGNDIITDSD--------GNDKLSFSDSNLKDLTFE 328
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 220 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---ILDGGNGDDF 276
Query: 328 YDANEHKQDFLSD 340
D D L
Sbjct: 277 IDGG-KGNDLLHG 288
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 6/114 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 218 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDILDGGNG 273
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+D + G N++ G+D+F G D + + +
Sbjct: 274 DDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDLTF 327
>gi|4835924|gb|AAD30298.1| MT1-MMP protein [Bos taurus]
Length = 261
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 37/124 (29%), Gaps = 27/124 (21%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H DI G++
Sbjct: 51 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADILIFFAEGFHGDITAFDGEGGFLAL 110
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
YF N + + G + A+HE+GHALGL H + +
Sbjct: 111 -----AYFPGPNLEGGHPKNEDLN-GNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWM 164
Query: 152 DYEN 155
D EN
Sbjct: 165 DTEN 168
>gi|186683544|ref|YP_001866740.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
gi|186465996|gb|ACC81797.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
Length = 861
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 61/180 (33%), Gaps = 5/180 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+P + I + D L T LN ++ ++ N I +
Sbjct: 646 TFNPSSTPILNKIAGTNSKDSLIGTEPTSSNLK-SLNAKTSATSNPANGNDEIHGQGGND 704
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GNDV+ G+ N+ +GND G +G D + + + +
Sbjct: 705 TIDGKGGNDVLYGDVGNDTLIGGAGNDKLVGGAGNDILTGGSGKDNFIFDTGK----FFA 760
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D ++D E + + S+ + + +D V +S + F +
Sbjct: 761 NRDLGVDGITDFELGDKIVLSKSTFTTLKSSLGDGFNNLKDFAVVTNGTAAKSSQAFIVY 820
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 68/219 (31%), Gaps = 48/219 (21%)
Query: 171 SMMDASFGYCATPMVSDIVAV---QKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ +F +TP+++ I + G +L + K + I+
Sbjct: 641 TGTLETFNPSSTPILNKIAGTNSKDSLIGTEPTSSNLKSLNAKTSATSNPANGNDEIHGQ 700
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D +D G N + G GND +IG +
Sbjct: 701 GGNDTID----------------------GKGGNDVLY---------GDVGNDTLIGGAG 729
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPS-------YLYKIYRFENAIIVYDANEHKQDFL 338
N+ +GND+ G SG D F + + I FE + +
Sbjct: 730 NDKLVGGAGNDILTGGSGKDNFIFDTGKFFANRDLGVDGITDFELGDKIVLSKSTFTTLK 789
Query: 339 S----DVERL-RFADQCIDSVNVKQRSILEYTASYEDLI 372
S L FA + ++ + Y + + DL
Sbjct: 790 SSLGDGFNNLKDFAVVTNGTAAKSSQAFIVYDSVHGDLY 828
>gi|166365040|ref|YP_001657313.1| hypothetical protein MAE_22990 [Microcystis aeruginosa NIES-843]
gi|166087413|dbj|BAG02121.1| hypothetical protein MAE_22990 [Microcystis aeruginosa NIES-843]
Length = 445
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+ Y ++ + G D + ++ L ++ + G +N+T+
Sbjct: 117 GNDTYFVDNVGDIVKEVFDDAPGGTADTVLASVSYS------LAPGTFGNQGYGIENLTL 170
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G+S N+++ GN++ N FF ++GND +G +G DT Y A S + + F
Sbjct: 171 TGFGNI-NATGNSKNNILTGNASANTFFGTAGNDTINGGAGFDTANYSALSNVVTLGAFG 229
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
V + D L VE + + D+V+ S+
Sbjct: 230 ----VLNKGALGTDTLIAVESIVGSSLLGDTVDHSGASV 264
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 233 LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
L L V + ++ S++ I G N + +S+ G +GND + G + N+
Sbjct: 288 LPLTFQVSQFENVIGSSFADTITGNSDNNILNGGAGNDSINGGAGNDSINGGAGNDSING 347
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+GND G +G DT A + ++
Sbjct: 348 GAGNDTLIGGAGNDTLTGDAGADKFRF 374
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 7/130 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+ Y ++ + G D + ++ L ++ + G +N+T+
Sbjct: 6 GNDTYFVDNVGDIVKEVFDDAPGGTADTVLASVSYS------LAPGTFGNQGYGIENLTL 59
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G+S N+++ GN NNV GND +G G DT
Sbjct: 60 TGFGNI-NATGNSKNNILTGNIRNNVLNGGLGNDTINGGLGNDTLDGGVGVDSMDGGDGN 118
Query: 323 NAIIVYDANE 332
+ V + +
Sbjct: 119 DTYFVDNVGD 128
>gi|209525312|ref|ZP_03273854.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209494327|gb|EDZ94640.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 539
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 68/209 (32%), Gaps = 27/209 (12%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPF-----------IQTIYDSGGDDLL-----DLTLIG 237
+YG G N +Y + G++ L D TL+G
Sbjct: 238 LYG---GGGNNTLYGFTGNDTLIGGGGNDLLYGGQNNDFLDGGNGNNTLYGGLNDDTLLG 294
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G+ + + G + N T+ ++++G +GND++ GN N+ G+D
Sbjct: 295 GIGRDLLFGEAGNDFLDGGDGNDTLYGGEDNDTLLGGNGNDLLFGNQGNDSLDGGPGDDT 354
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDV---ERLRFADQ 349
G G DT + + + + D ++ D L + L
Sbjct: 355 LYGGKGDDTLLGSQGDDILLGNQGNDILYGGDGDDCLYGGQGDDTLYGGRGRDYLSGDRG 414
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
V V + + + L+ G D
Sbjct: 415 NDFLVGVDTSADFPGLTTIDTLVGGEGFD 443
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 15/150 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D GG N + L TE + G N T+ T ++++G GND++ G N+
Sbjct: 217 DHVFEGGDGNSLILGTEGNDLLYGGGGNNTLYGFTGNDTLIGGGGNDLLYGGQNNDFLDG 276
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--------- 342
+GN+ G DT L F A + D L E
Sbjct: 277 GNGNNTLYGGLNDDTLLGGIGRDLL----FGEAGNDFLDGGDGNDTLYGGEDNDTLLGGN 332
Query: 343 --RLRFADQCIDSVNVKQRSILEYTASYED 370
L F +Q DS++ Y +D
Sbjct: 333 GNDLLFGNQGNDSLDGGPGDDTLYGGKGDD 362
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 31/175 (17%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGY 256
+ +Y E ++ + G+D LD TL GG + L ++ + G
Sbjct: 317 DTLYGGEDNDTLLGGNGNDLLFGNQGNDSLDGGPGDDTLYGGKGDDTLLGSQGDDILLGN 376
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND------------------VF 298
+ N + + + G G+D + G + GND
Sbjct: 377 QGNDILYGGDGDDCLYGGQGDDTLYGGRGRDYLSGDRGNDFLVGVDTSADFPGLTTIDTL 436
Query: 299 DGSSGLDTFFYYA------PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G G DTF + I + ++ + N L + F+
Sbjct: 437 VGGEGFDTFVLGNEKGPFYDNGNDDINGVADYALILNFNSATDVILLSNDDYLFS 491
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 1/126 (0%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S + V G N++ + GND+ G G +T + + + I N ++ N
Sbjct: 214 PSADHVFEGGDGNSLILGTEGNDLLYGGGGNNTLYGFTGNDTL-IGGGGNDLLYGGQNND 272
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D + L + R +L A + L G D +
Sbjct: 273 FLDGGNGNNTLYGGLNDDTLLGGIGRDLLFGEAGNDFLDGGDGNDTLYGGEDNDTLLGGN 332
Query: 394 GRDITF 399
G D+ F
Sbjct: 333 GNDLLF 338
>gi|186683198|ref|YP_001866394.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
gi|186465650|gb|ACC81451.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
Length = 1181
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 6/116 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D D+ + I N + + + N+ + + + G GND + GNS ++
Sbjct: 985 TDSFDVINANSTQTSI-FNKNTVTFLNELNNNI-VGFDNSNDVINGQGGNDTINGNSGDD 1042
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ +G+D+ G G D + + N + + D ++D
Sbjct: 1043 LLRGGAGDDLLIGGKGNDILIGGMGADAFVY----NTNAAFTSATVGIDTIADFNH 1094
>gi|307689106|ref|ZP_07631552.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 1018
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E + I + + G G+D + G ++ GND+ G +G D
Sbjct: 554 IHGMEGDNIIYGSDQDDIIFGFGGDDTIYGYGGDDQLIGGDGNDILYGGTGSDLLAGDEG 613
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
S Y + + + + + +D ++ ++ D
Sbjct: 614 SDTYIFKKGDGMDFISEFDSSGKD----IDTVKITDG 646
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + GS+G+D++ S N++ GND GS+G DT+ + + I F+ +
Sbjct: 286 VDIITGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDFDTTVGN 345
Query: 328 YDANEHKQDFLSDVERLRF 346
D + L E + F
Sbjct: 346 MDTIKFGDGILP--ENILF 362
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G D++ G++ +++ + SGND+ DG G D + Y + + + D +
Sbjct: 282 GTEGVDIITGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDFDT 341
Query: 333 HKQDFLSDVERLRFADQ 349
+ +++ ++F D
Sbjct: 342 ----TVGNMDTIKFGDG 354
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG + + VI + G+ GND +IG + F +GND F G G D + +
Sbjct: 698 GGQIEVIVNGGGDVINVITGTDGNDTLIGTDKIDRFDGLTGNDTFIGDKGNDIYVINLNT 757
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ I D E D + E +
Sbjct: 758 GIKIIED-------IDITEGNIDTIQFGEGIS 782
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G+ GND + G +++ GND+ G G DT+ + + + I + I D
Sbjct: 848 IGTDGNDEIHGTGKDDIIDGHLGNDILIGGKGNDTYIFNLGTGIKIIEDIDVTIGNIDTI 907
Query: 332 EHKQ 335
+
Sbjct: 908 KFGT 911
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 56/201 (27%), Gaps = 31/201 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-------WSSIGG 255
GN+IY + G D ++ + KN + SS
Sbjct: 453 GNDIYIYNLNTGIKTIKDNDITGGNVDTIEFGVGIDPKNIVFTRVGDNLEISIKESSGKV 512
Query: 256 YEKNMTIAQHTVIESVVGSSG---NDV--------------VIGNSANNVFFESSGNDVF 298
+N I IE + + G ND + G +N+ + S +D+
Sbjct: 513 IVENYYIGIENHIEIIKFADGTIWNDERINKQPVVIRGQGEIHGMEGDNIIYGSDQDDII 572
Query: 299 DGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDF--LSDVERLRFADQCI 351
G G DT + Y + A + D + + F +
Sbjct: 573 FGFGGDDTIYGYGGDDQLIGGDGNDILYGGTGSDLLAGDEGSDTYIFKKGDGMDFISEFD 632
Query: 352 DSVNVKQRSILEYTASYEDLI 372
S + +D++
Sbjct: 633 SSGKDIDTVKITDGILAKDVM 653
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLY--KIYRFENAIIVYDANEHKQDFLSDVERL 344
N ++GND F+G G D+ + + Y + ++ I D D ++ E +
Sbjct: 11 NRLTGTTGNDRFEGGKGNDSILGFTGNDEYLFNLGDGQDRITDMDKTNGNIDTITFGENI 70
Query: 345 RFAD 348
+D
Sbjct: 71 VGSD 74
Score = 44.3 bits (103), Expect = 0.068, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I V E + GS+G D + N++ G D+ G +G D + + I
Sbjct: 138 IVGTDVNEWIEGSTGKDDIEARGGNDIIDGRGGGDLSKGGTGSDIYIFNKGYGELIIEET 197
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
I D + + + + F + ++ +
Sbjct: 198 AETIGNIDKIRFGKGI--NPDDVVFNKEGLNLI 228
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G+S +D++ G ++F GND F G G D + Y + + I + D
Sbjct: 422 IGTSDDDILNGIDKVDIFDGLLGNDTFIGGKGNDIYIYNLNTGIKTIKDNDITGGNVDTI 481
Query: 332 EHKQ 335
E
Sbjct: 482 EFGV 485
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 42/139 (30%), Gaps = 23/139 (16%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--------IGGVKNYIDLNTESWSSIG 254
GN+ Y + G D + V N +++ S
Sbjct: 879 GNDTYIFNLGTGIKIIEDIDVTIGNIDTIKFGTGIKPENIVFVRVDNNLEITIIGSSDKI 938
Query: 255 GYEKNMTIAQHTVIESVV------GSSGNDV---------VIGNSANNVFFESSGNDVFD 299
+ I + I +++ G D+ +IG+ ++ + G D+FD
Sbjct: 939 IIKNYFDIDFNVKITNIIERIEFVGGIVWDIDIIQSQIVHLIGSDNDDKLIGTIGVDIFD 998
Query: 300 GSSGLDTFFYYAPSYLYKI 318
G G D F + Y
Sbjct: 999 GHLGKDIFVGGKGNDTYIF 1017
>gi|209549306|ref|YP_002281223.1| hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535062|gb|ACI54997.1| hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 1582
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 14/157 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N T+ + + G +G D++IG + N+V GND G +G D
Sbjct: 557 ITGGIANDTLDGGAGNDQLFGGAGTDILIGGAGNDVLQGGDGNDTLTGGAGADQLDGGTG 616
Query: 313 SYL--YKIYRFENAIIVYDANEHKQDFLSDVERLRFA---------DQCIDSVNVKQRSI 361
+ Y N + D S +E L + I I
Sbjct: 617 NDTAAYTGQITLNLKTGVHTGDAAGDTFSGIEVLSGSSANDTFVGNGTTITFNGGAGTDI 676
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++Y+ S + +G ++ G +EG +
Sbjct: 677 VDYSTSAAAVNVTLGAAGVTTVA---TGGDAEGNSLV 710
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 48/147 (32%), Gaps = 10/147 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHT 266
S + GDD+ L+G I T + I + ++A
Sbjct: 934 SFADTLASSTSGHALVGGAGDDIY---LVGNQGVTITEATGGGTDEIRTALTSYSMAAFA 990
Query: 267 VIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E +GN + GNS NNV +GND G +G D A + AI
Sbjct: 991 NVERLTFTGTGNATLTGNSGNNVISGGTGNDTLIGGAGADQLIGGAGTDTTSYANAAAAI 1050
Query: 326 IV-----YDANEHKQDFLSDVERLRFA 347
+ + D S +E +
Sbjct: 1051 TINLKTGVHIGDAAGDTFSSIETFIGS 1077
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 10/168 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
+ + QT+ GG+D ++ I ++ I + ++A + +
Sbjct: 1146 DTLGSTATTTQTLQGGGGNDTY---VVSSQNTVITESSGGGDDEIRTTAASYSMAAYANV 1202
Query: 269 ESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
E + +GN + GN+ +NV +GND G +G D A + AI +
Sbjct: 1203 EHLTFTGTGNATLTGNAGDNVISGGTGNDTLIGGAGADQLIGGAGTDSASYANAAAAITL 1262
Query: 328 -----YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ D +E ++ + L A D
Sbjct: 1263 DLKNGAHTGDAAGDSFDSIETFIGSNFNDTFFSSASADHLNGGAGTLD 1310
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 9/145 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHT 266
S + GDD+ L+ I + I ++A T
Sbjct: 1350 SFADTLASSTSGHALVGGAGDDIY---LVDAQGVTITEAAGEGTDEIRTTLTTYSMANDT 1406
Query: 267 VIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E +GN + GN+ +N+ +GND +G G D + F
Sbjct: 1407 NVERLTFTGTGNATLTGNTGDNIITGGTGNDTLNGGGGADQLHGGSGDDTL----FSGTG 1462
Query: 326 IVYDANEHKQDFLSDVERLRFADQC 350
+ + D L+ + FAD
Sbjct: 1463 DFHLYGDDGSDTLNLILGQGFADGG 1487
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 12/177 (6%)
Query: 200 GSLGNNIY-----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G GN++Y + V + T+ + G L + V+ + ++ G
Sbjct: 270 GGAGNDVYILGVQGVSVVEAAGEGDDTVQTAQG--TLSIAGYANVERLTFTGSVNFVGTG 327
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N TI +++ G +GND + G + ++ +G D DG G D Y + +
Sbjct: 328 NALDN-TITGGVANDTLDGGAGNDQLFGGAGTDILIGGAGADQLDGGDGADNASYSSSTS 386
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I + D + +E V+ S A + +
Sbjct: 387 AVTINLKTGVYT----GDAAGDTFTSIEGFIGTSSADTFVSGSDASFFNGGAGVDTV 439
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 4/140 (2%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT-VIESVVGSSGNDVVIGNSANNVF 289
L+ + + N S+ + M + T +++ G+SG+D + G N++
Sbjct: 139 LNQSATTSSTCFGTNNINSFQHLNRQGAKMAVITGTAGNDTLNGTSGDDQISGLGGNDIL 198
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G D DG +G+DT Y + + + + D ++E+ +
Sbjct: 199 IGGAGADRLDGGAGVDTVDYSTSTAGVTV---DFWTSTGSGGDAAGDTYVNIEKAIGSAY 255
Query: 350 CIDSVNVKQRSILEYTASYE 369
V+ +L+ A +
Sbjct: 256 GDTLVSAVPGHVLQGGAGND 275
Score = 41.3 bits (95), Expect = 0.56, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 18/183 (9%)
Query: 200 GSLGNNIYKIEVQQKDSP-----------FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
G G++IY ++ Q T Y D ++ G N
Sbjct: 1366 GGAGDDIYLVDAQGVTITEAAGEGTDEIRTTLTTYSMANDTNVERLTFTGTGNATLTGNT 1425
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-------GS 301
+ I G N T+ + + G SG+D + + + + G+D +
Sbjct: 1426 GDNIITGGTGNDTLNGGGGADQLHGGSGDDTLFSGTGDFHLYGDDGSDTLNLILGQGFAD 1485
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D Y+ L + + L+D++ +R D + +
Sbjct: 1486 GGNDGDTYHVNMALAATIKDTGVGGSDAVYLDRVLSLADLDNMRVGDDLVLQSHADATPG 1545
Query: 362 LEY 364
Y
Sbjct: 1546 TGY 1548
Score = 37.8 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 54/181 (29%), Gaps = 18/181 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GS N+ + G D++D + +++ +
Sbjct: 651 SGSSANDTFVGNGTTITFNG------GAGTDIVDYSTSAAA---VNVTLGAAGVTTVATG 701
Query: 259 NMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
V IE VVGSS D + +++ + +G+D++ + +
Sbjct: 702 GDAEGNSLVNIERVVGSSFADTLGSSTSGHTLVGGAGDDIY--------LVDNQGVTIVE 753
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I +++ER+ F ++ + + D++ G
Sbjct: 754 AAGEGTDEIRTSLTTFSMANYTNIERVTFTGTGAVNLTGGAGDDILTGGAANDILDGAGG 813
Query: 378 D 378
+
Sbjct: 814 N 814
>gi|220921927|ref|YP_002497228.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
2060]
gi|219946533|gb|ACL56925.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
2060]
Length = 1016
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y T+ G+D + GG+ N + L G E N
Sbjct: 848 DRVYGGTGNDFLTGDAGNDTVSGEQGNDKV----FGGIGNDLLL---------GNEGNDF 894
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G +G+D + G ++V F ++GND G +G D F + + F
Sbjct: 895 LGGGAGSDMLSGGAGDDGLNGEDGDDVLFGNAGNDALVGGAGRDIFAFGRGDGRDVVQDF 954
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
D + V+++ A S V
Sbjct: 955 VAGGPEADILSFNGGVFTRVDQVWAASAQAGSAVVITLGA 994
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 49/165 (29%), Gaps = 24/165 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV---------FFESSGNDVFDGSSG 303
+ G I + G G D V G N++ + +GND G +G
Sbjct: 796 LFGENGRDFIGAGAGDDFASGGFGRDEVHGEDGNDLLFGDDDDDGVYGEAGNDRVYGGTG 855
Query: 304 LDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVN 355
D A + + F DFL + L
Sbjct: 856 NDFLTGDAGNDTVSGEQGNDKVFGGIGNDLLLGNEGNDFLGGGAGSDMLSGGAGDDGLNG 915
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+L A + L+ G+D+F FG +GRD+ D
Sbjct: 916 EDGDDVLFGNAGNDALVGGAGRDIFA-------FGRGDGRDVVQD 953
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 40/146 (27%), Gaps = 10/146 (6%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ L S ++ + +A ++ + + + + G A + G+DV
Sbjct: 728 ADSRQSLIMVSDNNFAASQVTQVLAFAVEVDDPIPPAAAERLTGTDAADTLRGGWGDDVV 787
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G+ G D F + A + + +D + D
Sbjct: 788 FGALGNDLLFGENGRD----FIGAGAGDDFASGGFGRDEVHG------EDGNDLLFGDDD 837
Query: 359 RSILEYTASYEDLIQVIGQDVFESMK 384
+ A + + G D
Sbjct: 838 DDGVYGEAGNDRVYGGTGNDFLTGDA 863
>gi|163815758|ref|ZP_02207129.1| hypothetical protein COPEUT_01938 [Coprococcus eutactus ATCC 27759]
gi|158448899|gb|EDP25894.1| hypothetical protein COPEUT_01938 [Coprococcus eutactus ATCC 27759]
Length = 1746
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 2/115 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I +++ G G D + +++ F +G D+ G+ G D F
Sbjct: 1015 IYGNAGDDQIEAGDGADTIYGGDGKDQIKAGDGDDILFGGAGADILCGNKGNDYMFGEEG 1074
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + + ++ D + E + D V ++ TA
Sbjct: 1075 DDTYIFDKSDGVDVIED--NSGTSTIQFGEGIHLNDLTAMKVGDDLFFLISGTAD 1127
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 2/128 (1%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+D+ + I+ G + T GGV I+ + Y TI + +
Sbjct: 1384 NEDARGFRLIFADGLVEY--ATASGGVLRTINDWEGTEYHTSIYTDGTTIVAENGDDQLN 1441
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS +D +IG NN + G+D DG G D + A + +Y + + DA
Sbjct: 1442 GSEASDNLIGGDGNNRIAGNGGDDYLDGGKGTDMLYGGAGADVYIYQKGYGTDTISDAQG 1501
Query: 333 HKQDFLSD 340
++
Sbjct: 1502 ENIIEITG 1509
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S I G + ++ + + + G G+D + GN+ N++ SG+D DG SG D +
Sbjct: 821 SYIFGKAGDDQLSGGSGSDRIYGEDGSDKLYGNAGNDILSGGSGDDCLDGGSGNDILYGG 880
Query: 311 A-------PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
Y I+ D + V
Sbjct: 881 NIGDTSEDGDDEYVFSTGYGQDIIVDYGGSNTIRFTGV 918
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+T+Y + G D + L GG Y G + T+ + + G +G+D
Sbjct: 1578 RTLYGTAGSDYM-LGFDGGRMTY-----------YGLDGADTLNGSDGTDVLYGGTGDDR 1625
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++G + N+ +GND +G +G DT+++ I
Sbjct: 1626 ILGGNGNDCLLGEAGNDYLEGGAGNDTYYFGIGYGTDSISDNSG 1669
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G +N I + + G SG+D + G ++ + ++GND+ G SG D +
Sbjct: 814 YSGTNQNSYIFGKAGDDQLSGGSGSDRIYGEDGSDKLYGNAGNDILSGGSGDDCLDGGSG 873
Query: 313 SYLYKIYRFENAIIVYD-----ANEHKQDFLSD 340
+ + + D + + QD + D
Sbjct: 874 NDILYGGNIGDTSEDGDDEYVFSTGYGQDIIVD 906
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 5/120 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + V G G+D V G + +++ +GND G +G D + + I
Sbjct: 1261 ILAGDDADVVYGMDGDDQVFGENGDDIISGGAGNDYVSGGAGNDVVISQSGNDF--IDGG 1318
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ Y + + D E + + + ++ I Y + DL+ V
Sbjct: 1319 ADDDTYYISPSCGTVTIKDTE---GKNTIVCADGLESTKIKAYRLDWNDLLIVFEGTETS 1375
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Query: 245 LNTESWSSIG-GYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
L + S G++ +++ GS G DV+ G + ++ +GND G +
Sbjct: 1580 LYGTAGSDYMLGFDGGRMTYYGLDGADTLNGSDGTDVLYGGTGDDRILGGNGNDCLLGEA 1639
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G D A + Y + D +
Sbjct: 1640 GNDYLEGGAGNDTYYFGIGYGTDSISDNS 1668
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 62/206 (30%), Gaps = 35/206 (16%)
Query: 194 IYGAPKGSL---GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID------ 244
+YG G G++ Y I D GG + + T + ++
Sbjct: 877 LYGGNIGDTSEDGDDEYVFSTGYGQD----IIVDYGGSNTIRFTGVSSKDIRVNGVNEYD 932
Query: 245 -----------LNTESWSSIGGYEKNMTIAQHTVIE---------SVVGSSGNDVVIGNS 284
L +++ Y I + I + G+ D +
Sbjct: 933 AEIRIQGTNDTLTLKNFCKDEVYTDYTLIFRDKKIHCLDEDSPFHYIYGTETEDSLKAVV 992
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ + + ND GS+G D + A I + A +Y + Q D + +
Sbjct: 993 EDSYMYGYAENDTIIGSAGKDIIYGNAGDDQ--IEAGDGADTIYGGDGKDQIKAGDGDDI 1050
Query: 345 RFADQCIDSVNVKQRSILEYTASYED 370
F D + + + + +D
Sbjct: 1051 LFGGAGADILCGNKGNDYMFGEEGDD 1076
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + + G +GND V G + N+V SGND DG + DT++
Sbjct: 1270 VYGMDGDDQVFGENGDDIISGGAGNDYVSGGAGNDVVISQSGNDFIDGGADDDTYYISPS 1329
Query: 313 SYLYKIYRFENAIIV 327
I E +
Sbjct: 1330 CGTVTIKDTEGKNTI 1344
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 60/205 (29%), Gaps = 45/205 (21%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + D +YI + G + I + + G++GND++ G S +
Sbjct: 807 GTEKADRYSGTNQNSYIFGKAGDDQ-LSGGSGSDRIYGEDGSDKLYGNAGNDILSGGSGD 865
Query: 287 NVFFESSGNDVFDGS---------------------------SGLDTFFYYAPSYLYKIY 319
+ SGND+ G G +T + S
Sbjct: 866 DCLDGGSGNDILYGGNIGDTSEDGDDEYVFSTGYGQDIIVDYGGSNTIRFTGVSSKDIRV 925
Query: 320 RFENAIIVYDANEHKQDFLSDVER----------LRFADQCIDSVNVKQRSILEYTASYE 369
N + D L+ L F D+ I ++ Y E
Sbjct: 926 NGVNEYDAEIRIQGTNDTLTLKNFCKDEVYTDYTLIFRDKKIHCLDEDSPFHYIYGTETE 985
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEG 394
D ++ + +D Y +G +E
Sbjct: 986 DSLKAVVEDS-------YMYGYAEN 1003
Score = 41.3 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 17/139 (12%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESV------VGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+E S+ + ++ VIE +G+ D G + N+ F +G+D G
Sbjct: 775 SEMLSTWSEHFSAISTHYAEVIELAKTGYVYIGTEKADRYSGTNQNSYIFGKAGDDQLSG 834
Query: 301 SSGLDTFFYYAPSY------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFA----DQC 350
SG D + S I + D D L + D+
Sbjct: 835 GSGSDRIYGEDGSDKLYGNAGNDILSGGSGDDCLDGGS-GNDILYGGNIGDTSEDGDDEY 893
Query: 351 IDSVNVKQRSILEYTASYE 369
+ S Q I++Y S
Sbjct: 894 VFSTGYGQDIIVDYGGSNT 912
Score = 37.8 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 10/128 (7%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S N+ I T E+ +D V ++ N F + D G S D + +
Sbjct: 1204 SDKRDVSDNVNIISGT--EN------SDAVFAENSKNFIFAGAEYDYIVGGSNAD--YIF 1253
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +I ++A +VY + Q F + + + D V+ + + + S D
Sbjct: 1254 GDRDVDRILAGDDADVVYGMDGDDQVFGENGDDIISGGAGNDYVSGGAGNDVVISQSGND 1313
Query: 371 LIQVIGQD 378
I D
Sbjct: 1314 FIDGGADD 1321
>gi|332254133|ref|XP_003276184.1| PREDICTED: matrix metalloproteinase-17 [Nomascus leucogenys]
Length = 607
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIHS-DIKFI 82
P LS+ + +P ++ R +AL WS + L F E + + DI+
Sbjct: 129 APTKWNKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQID 188
Query: 83 SS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALH 126
S N+GY + + +FD + W + G L A+H
Sbjct: 189 FSRADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 248
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 249 EFGHAIGLSH 258
>gi|284052236|ref|ZP_06382446.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 285
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 13/118 (11%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ GG++ L GG N + G N + + +VG
Sbjct: 70 GDKGNDTLVAGGGNNTL----YGGADNDF---------LFGGTGNDLLFGDDGNDELVGG 116
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GND + G +++ F GND+ G G D F + L + R + +
Sbjct: 117 KGNDTIFGGPGDDIIFGGDGNDILRGGKGNDRIFGDEGNDLLEGGRGVDTLTGGGGRN 174
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 11/163 (6%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
TIY GGDD L + + G N + + ++ N T+ +S++
Sbjct: 1 GNDTIYGGGGDDCLRGGQGNDLIFGEGGNDLLFGDKDADTLFAVSGNNTMYGGQGNDSLI 60
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +D++ G+ N+ GN+ G + D F + L F +
Sbjct: 61 GGENDDLMFGDKGNDTLVAGGGNNTLYGGADNDFLFGGTGNDLL----FGDDGNDELVGG 116
Query: 333 HKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
D + + + F D + + + + DL++
Sbjct: 117 KGNDTIFGGPGDDIIFGGDGNDILRGGKGNDRIFGDEGNDLLE 159
>gi|28057417|gb|AAO29274.1| bacteriocin [Xylella fastidiosa Temecula1]
Length = 1412
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 35/196 (17%)
Query: 246 NTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
E+ SS+G G N T+ + ++G G+D + G+ N++ +G+DV DG
Sbjct: 1029 TPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDTLYGSGGNDLLLGGAGDDVLDGG 1088
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRF------------ 346
+G + A + + K+ + ++ + D L + F
Sbjct: 1089 TGSNRLEGGAGNDVLKVSYWSADNVLNGGS--GDDLLYGSAYADTYLFNKGDGHDTIIEQ 1146
Query: 347 -ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDITFDSYLY 404
D + + + +D++ +G +K + DS Y
Sbjct: 1147 SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWL------------DSNGY 1194
Query: 405 LGSYDDLRNVFGSDRG 420
+D+ + +D
Sbjct: 1195 RNGNNDIEQIVFADGT 1210
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 84/311 (27%), Gaps = 87/311 (27%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+GG ++ ND SY+ + + S D+ +YG+
Sbjct: 1086 DGGTGSNRLEGGAGNDVLKV---SYWSADNVLNGGSG--------DDL-----LYGSAYA 1129
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTESW 250
+ Y TI + GDD L L G +DL
Sbjct: 1130 ----DTYLFN----KGDGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHD 1181
Query: 251 S-------SIGGYEKN------MTIAQHTVIE---------SVVGSSGNDVVIGNSA--- 285
S GY + A T+ + +G+ GND + G
Sbjct: 1182 SIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDI 1241
Query: 286 ---------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIY 319
+N +GND V +G SG DT + A + Y
Sbjct: 1242 LLGGDGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDTLYGSAYADTYLFN 1301
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + D L E L + C + + + +
Sbjct: 1302 KGDGHDTI--IEQSGDDKLVFGEGLHREEACFTRSGDDLSILFNGSEDQVTVAGWFSEAA 1359
Query: 380 FESMKHFYEFG 390
+ ++ G
Sbjct: 1360 HQVESLVFQDG 1370
Score = 38.6 bits (88), Expect = 4.0, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 12/99 (12%)
Query: 271 VVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAII 326
+ G SG+D + G++ + F + G+D SG D + R + +
Sbjct: 1280 LNGGSGDDTLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGEGLHREEACFTRSGDDLS 1339
Query: 327 VYDANEHKQDFLSD--------VERLRFADQCIDSVNVK 357
+ Q ++ VE L F D + S V+
Sbjct: 1340 ILFNGSEDQVTVAGWFSEAAHQVESLVFQDGTVLSGEVE 1378
>gi|332845157|ref|XP_001165615.2| PREDICTED: matrix metalloproteinase-25 [Pan troglodytes]
Length = 562
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 71/210 (33%), Gaps = 49/210 (23%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEETS 74
R + ++ +K LT SF + + +QE R +AL W LTF E
Sbjct: 104 RRRRYALSGSMWKKRTLTWRVRSFPQS--SQLSQETVRVLMSYALMAWGMESGLTFHEVD 161
Query: 75 IHS----DI------KFISSNNGYVCTPRYDSRYF--------MEINFDKADVWRYGI-- 114
DI F + + + F + +FD + W +G
Sbjct: 162 SPQGQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHFDDEETWTFGSKD 221
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G+GT L A+HE GHALGL H + N S+M F
Sbjct: 222 GEGTDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQGPVGDP 262
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D +Q++YG + +
Sbjct: 263 DKYRLSQ----DDRDGLQQLYGKAPQTPYD 288
>gi|319638376|ref|ZP_07993138.1| outer membrane secretion protein [Neisseria mucosa C102]
gi|317400125|gb|EFV80784.1| outer membrane secretion protein [Neisseria mucosa C102]
Length = 429
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 44/127 (34%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G I +++ G + D + G + +GND +G SG D
Sbjct: 165 IYGGNGTDVIYAGAGNDTIYGDADGDSLYGEEGKDYLQGGAGNDYLNGGSGADIMRGGDG 224
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + +I Y D + V D + + +++ S + I
Sbjct: 225 NDVYFVDNANDQVIEYGNAHAGIDTVRTVIDYTLTDHVENLILQGMQNLNGTGNSLNNNI 284
Query: 373 QVIGQDV 379
+ G D
Sbjct: 285 EGNGGDN 291
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 18/146 (12%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDL----LDLTLIGGVKNYI-----DLNTESWSSI 253
GN++Y V + I+ G D +D TL V+N I +LN S
Sbjct: 224 GNDVY--FVDNANDQVIEYGNAHAGIDTVRTVIDYTLTDHVENLILQGMQNLNGTGNSLN 281
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
E N + G +G+D ++G N+ GND+ G +G DT+F+
Sbjct: 282 NNIEGNGGDNH------LYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKGY 335
Query: 314 YLYKI-YRFENAIIVYDANEHKQDFL 338
I N +++ D L
Sbjct: 336 GHDTIREESGNDTLLFGKGVAASDVL 361
>gi|47214887|emb|CAG01018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 60/162 (37%), Gaps = 40/162 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHS----DIKFISSNNGYVC--------TPRYDS 96
+ + R A WS+V L F E + +I+ ++ +
Sbjct: 120 EEQRYIFRLAFRMWSEVSPLEFVEDTRSPLEDVEIRLGFGTGKHLGCNQRFDGTGQEFAH 179
Query: 97 RYF-MEINFDKADVWR-YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
+F +I+FD + + G G L A+HEIGH LGL P Y G
Sbjct: 180 AWFLGDIHFDDDEHFTAPNAGSGISLLKVAVHEIGHVLGL--PHIYREG----------- 226
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
S+M Q S + G+ M D A+Q++YG
Sbjct: 227 ------SIM-----QPSYLPQESGFEVGWM--DRKAIQRLYG 255
>gi|312883386|ref|ZP_07743112.1| Hemolysin-type calcium-binding region [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369002|gb|EFP96528.1| Hemolysin-type calcium-binding region [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 647
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 82/279 (29%), Gaps = 32/279 (11%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL---GNNIYKIEVQQKDSPFI--- 219
F+ D D FG + + K+YG + G I ++ D +
Sbjct: 57 FLQGDQGADYLFGGQGSDRLYGGEGDDKLYGQSGDDVLEGGEGIDDLKGGSGDDKLLGEQ 116
Query: 220 --QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
++ G+D LD + G + + T+ + + G GN
Sbjct: 117 GEDKLWGGDGNDELDGGQSDDE-------------LWGEDGDDTLIGGQGSDKLFGDDGN 163
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV+ G +N+ GND G SG DT + + D
Sbjct: 164 DVLYGGQSNDTLKGGEGNDTLYGGSGNDTIDGDGVNAYGDDTLYGGEGTDTLRGNSGNDE 223
Query: 338 LSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L + L D R + ++L G D EG
Sbjct: 224 LYGGVDDDILEGNDGNDKVFGEAGRDNIWGGQGDDELNGGQGDDQIWGGVGNDRLISGEG 283
Query: 395 RDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D + D + ++ D++ G D H+ +
Sbjct: 284 NDKLYGGEGDDHFFIDKNDEVYGGEGFD----TIHFSQY 318
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 52/155 (33%), Gaps = 32/155 (20%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
P + TI GDD +D + + ++ + G SG
Sbjct: 458 PRVYTILSGNGDDSIDASG-------------------------SYGYNSARRYINGESG 492
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + G+S ++ GND G SG D + A I N+ V D
Sbjct: 493 NDSIKGSSYDDTLIGGIGNDTISGGSGNDIIYGLAYDDTQYIISQTNSSDVLKGENGSDD 552
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
F D Q S+ +T++YED+
Sbjct: 553 FFCD-------SQDTVDGGSGYDSVTLFTSNYEDI 580
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
IY + D L D ++ G N I E ++ G E N + + + + G G
Sbjct: 4 IYGTNDQDTLIGTNEDDSIFGLRGNDILRGKEGTDNLSGGEGNDRLFGDSGSDFLQGDQG 63
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
D + G ++ + G+D G SG D K ++ ++
Sbjct: 64 ADYLFGGQGSDRLYGGEGDDKLYGQSGDDVLEGGEGIDDLKGGSGDDKLL 113
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 66/198 (33%), Gaps = 32/198 (16%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI----D 244
+YG GN+ I+ ++ T+Y G D L + L GGV + I D
Sbjct: 184 LYG----GSGNDT--IDGDGVNAYGDDTLYGGEGTDTLRGNSGNDELYGGVDDDILEGND 237
Query: 245 LNTESWS-----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG----- 294
N + + +I G + + + + + G GND +I N+ + G
Sbjct: 238 GNDKVFGEAGRDNIWGGQGDDELNGGQGDDQIWGGVGNDRLISGEGNDKLYGGEGDDHFF 297
Query: 295 ---NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
ND G G DT + KI + +A Q ER+R
Sbjct: 298 IDKNDEVYGGEGFDTIHFSQYQLNQKIEYLKEHYTSVEAWNFTQ----FKERVRIIGDTG 353
Query: 352 DSVNVKQRSILEYTASYE 369
D YT +
Sbjct: 354 DDFIHINDLNKNYTILND 371
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 39/130 (30%), Gaps = 6/130 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+I G T+ +S+ G GND++ G + GND G SG D
Sbjct: 2 SNIYGTNDQDTLIGTNEDDSIFGLRGNDILRGKEGTDNLSGGEGNDRLFGDSGSDFLQGD 61
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASY 368
+ Y F D L + + + ID +
Sbjct: 62 QGAD----YLFGGQGSDRLYGGEGDDKLYGQSGDDVLEGGEGIDDLKGGSGDDKLLGEQG 117
Query: 369 EDLIQVIGQD 378
ED + +
Sbjct: 118 EDKLWGGDGN 127
>gi|270487546|ref|ZP_06204620.1| FG-GAP repeat protein [Yersinia pestis KIM D27]
gi|270336050|gb|EFA46827.1| FG-GAP repeat protein [Yersinia pestis KIM D27]
Length = 2273
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 1753 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 1812
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 1813 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 1870
Query: 312 PSYL 315
Sbjct: 1871 GLAQ 1874
>gi|330967460|gb|EGH67720.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 691
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 6/147 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D + L + LNT + + GG + + T E++ GS D + GN
Sbjct: 500 DGNDTVSY-LFASAGVAVALNTSAQQATGG--SGLDTLKGT--ENLTGSQFADSLTGNKN 554
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NV GND G +G D + + + + +E +D L D+
Sbjct: 555 ANVLHGGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNSLDEVGRDGLRDI-ING 613
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLI 372
F D ++ T +++
Sbjct: 614 FKVGEGDKLDFTGFDARPLTDAHDAFT 640
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 29/89 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N++ G D G G D + + +
Sbjct: 308 NIFGTSDDDTLVGSAGNDILDGDQGADDMTGGDGNDIYVVDNALDTVIESNDSPSQVDTV 367
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ ++VE L
Sbjct: 368 VSSVSWTLGANVENLLLTGVSAIDGTGNA 396
Score = 37.4 bits (85), Expect = 7.5, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
D N + GG + I + +++VGS+GND++ G+ + GND++ +
Sbjct: 291 DNNDPAAIFAGGQNEGGNIFGTSDDDTLVGSAGNDILDGDQGADDMTGGDGNDIYVVDNA 350
Query: 304 LDTFF--YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
LDT +PS + + + + + +S ++
Sbjct: 351 LDTVIESNDSPSQVDTVVSSVSWTLGANVENLLLTGVSAID 391
>gi|187939503|gb|ACD38652.1| putative calcium-binding hemolysin protein [Pseudomonas aeruginosa]
Length = 769
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY T++ +S+ G +GND++ G+ N+ + +GND G G D + A
Sbjct: 57 LFGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGNDTLVGGLGNDYLYGEAG 116
Query: 313 SYLYKIYR--FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y+ R ++ +I D+N K D + +R D + + +L+ ++
Sbjct: 117 NDVYRFDRGWGQDTLINSDSNIDKTDTIEFGTGIRAEDIILSRNSDDLILLLKGSSDRIT 176
Query: 371 LIQVIGQDVFES 382
+ QD S
Sbjct: 177 VSSYFNQDAAGS 188
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 2/139 (1%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
D F + D+ L + +L G N + E ++ G N T+ +
Sbjct: 543 TDGNDRLFGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGNDTLIGGADSDY 602
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--Y 328
+ G G+D + GN+ N+ + +G D G SG D A + +Y++ + Y
Sbjct: 603 LYGEDGDDRIEGNNGNDTLYGGAGEDTLIGGSGNDYLAGDAGNDIYQLGNGWGQDTINNY 662
Query: 329 DANEHKQDFLSDVERLRFA 347
+ D L + +
Sbjct: 663 HTESNALDRLEFTDNITAD 681
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY T++ +S+ G +GND++ G+ N+ + +G+D G G D A
Sbjct: 221 LYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAG 280
Query: 313 SYLYKIYR--FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y+ R ++ + YD++ + D + +R D + + +L+ +
Sbjct: 281 NDVYRFDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRIT 340
Query: 371 LIQVIGQDVFES 382
+ QD S
Sbjct: 341 VSSYFNQDAAGS 352
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N + + V +++ G GND + G + N++ GND G +G DT + Y
Sbjct: 380 DGNDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGND-Y 438
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVER 343
N + +D QD + + +
Sbjct: 439 LYGEAGNDVYRFDRGW-GQDTIQNNDS 464
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY T++ +S+ G +GND++ G+ N+ + +G+D G G D + A
Sbjct: 385 LYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAG 444
Query: 313 SYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFAD 348
+ +Y+ R + D+N +K D + + D
Sbjct: 445 NDVYRFDRGWGQDTIQNNDSNTNKIDAIEFGSGISAND 482
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 35/89 (39%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N ++ + + + G GND + G + ++ GND G +G D + +
Sbjct: 393 TLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDR 452
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I ++ DA E ++
Sbjct: 453 GWGQDTIQNNDSNTNKIDAIEFGSGISAN 481
>gi|149202112|ref|ZP_01879085.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. TM1035]
gi|149144210|gb|EDM32241.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. TM1035]
Length = 263
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 65/193 (33%), Gaps = 7/193 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTV 267
Q TI+ GG+D ++ G L+ + + I G + T+
Sbjct: 18 FADQITGLDGNDTIFGGGGNDAINGNDDGDR-----LDGGAGNDTIAGGKGEDTLLGGLG 72
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + SG+D + G ++ GND DG +G D F + N ++
Sbjct: 73 NDRLTDESGDDRLFGGDGDDTLDAGEGNDRLDGGTGNDRMFGGEGNDTMN-GGTGNDVMH 131
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + + +RL + R +L + + G D+
Sbjct: 132 GGSGDDVMNAGAGADRLFGGEGNDVMRGGGGRDVLSGGEGNDFIDGGHGNDLMTGGVGAD 191
Query: 388 EFGLSEGRDITFD 400
F GRD+ D
Sbjct: 192 TFVFKFGRDVITD 204
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 53/155 (34%), Gaps = 11/155 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN+ + TI G+D L +GG+ N + + G
Sbjct: 35 GGNDAINGND---DGDRLDGGAGNDTIAGGKGEDTL----LGGLGNDRLTDESGDDRLFG 87
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + T+ + + G +GND + G N+ +GNDV G SG D A +
Sbjct: 88 GDGDDTLDAGEGNDRLDGGTGNDRMFGGEGNDTMNGGTGNDVMHGGSGDDVMNAGAGADR 147
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
F +D LS E F D
Sbjct: 148 L----FGGEGNDVMRGGGGRDVLSGGEGNDFIDGG 178
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 8/156 (5%)
Query: 220 QTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVG 273
T+ G+D LD + GG N +N + + + G + + + + G
Sbjct: 92 DTLDAGEGNDRLDGGTGNDRMFGGEGND-TMNGGTGNDVMHGGSGDDVMNAGAGADRLFG 150
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GNDV+ G +V GND DG G D + + + I ++ +
Sbjct: 151 GEGNDVMRGGGGRDVLSGGEGNDFIDGGHGNDLMTGGVGADTFVFKFGRDVITDFEPGDD 210
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ D L+ + L D + + + ++ ++E
Sbjct: 211 QID-LTGISGLNDFDDVLSAARISGSDVVLDFGAHE 245
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 11/153 (7%)
Query: 233 LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ + G + L +++ I G + N TI G GND + GN +
Sbjct: 1 MARLTGTDSADRLVGTAFADQITGLDGNDTI---------FGGGGNDAINGNDDGDRLDG 51
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+GND G G DT + ++ + D + D +RL
Sbjct: 52 GAGNDTIAGGKGEDTLLGGLGNDRLTDESGDDRLFGGDG-DDTLDAGEGNDRLDGGTGND 110
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + G DV +
Sbjct: 111 RMFGGEGNDTMNGGTGNDVMHGGSGDDVMNAGA 143
>gi|153010756|ref|YP_001371970.1| hemolysin-type calcium-binding region [Ochrobactrum anthropi ATCC
49188]
gi|151562644|gb|ABS16141.1| Hemolysin-type calcium-binding region [Ochrobactrum anthropi ATCC
49188]
Length = 219
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 63/179 (35%), Gaps = 8/179 (4%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T++ G D+L + TL G N I E + G + + +
Sbjct: 33 GGDGNDTVFGGNGSDILFGGAGNDTLFGENGNDILFGNEGNDVLSGGNGSDVLYGGNGDD 92
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +G+D++ G + N++ + +G+D+ DG +G D S + ++ D
Sbjct: 93 ILQGGNGSDLLFGGAHNDILYGGNGSDILDGGAGNDVLIGGNGSDTFLFNGGGGNDVILD 152
Query: 330 ANEHKQDF--LSDVERLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQDVFESMKH 385
N + + L A + V Q D + ++ + + H
Sbjct: 153 FNPGEDILQIQKGINGLDIASADDLADRVTQVGGNVVVDLGNGDSVTLVNTNADDVQAH 211
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N T+ + + G +GND + G + N++ F + GNDV G +G D +
Sbjct: 31 VFGGDGNDTVFGGNGSDILFGGAGNDTLFGENGNDILFGNEGNDVLSGGNGSDVLYGGNG 90
Query: 313 SYL 315
+
Sbjct: 91 DDI 93
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 3/127 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I H + V G GND V G + +++ F +GND G +G D F
Sbjct: 13 LFGSRFDDFIRAHGGDDLVFGGDGNDTVFGGNGSDILFGGAGNDTLFGENGNDILFGNEG 72
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
+ + + + ++Y N + L F IL+ A + L
Sbjct: 73 NDV--LSGGNGSDVLYGGNGDDILQGGNGSDLLFGGAHNDILYGGNGSDILDGGAGNDVL 130
Query: 372 IQVIGQD 378
I G D
Sbjct: 131 IGGNGSD 137
>gi|113476970|ref|YP_723031.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168018|gb|ABG52558.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 1175
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 13/156 (8%)
Query: 197 APKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
A + S IY+ Q + P + G+D ++ +GG + L +I
Sbjct: 922 ANEVSGTTTIYEFTANQTLQGIPGDDDLIGGTGNDKIN--GLGGNDSLSGL--GGNDTIN 977
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I + + ++G G D + G N+ F G+D G G D
Sbjct: 978 GADGNDDIKGNRGDDRLIGGKGRDRLNGGYENDTIFGGHGDDTLIGRLGNDQMLGGKGED 1037
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD---VERLRFA 347
I R + D L+ ++R FA
Sbjct: 1038 ---ILRGGQGRDRLNGGA-GNDILTGDASIDRFIFA 1069
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 14/174 (8%)
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP--FIQTIYDSGGDDLLDL 233
+ T + + A Q + G P +++ K + ++ GG+D ++
Sbjct: 922 ANEVSGTTTIYEFTANQTLQGIPG---DDDLIGGTGNDKINGLGGNDSLSGLGGNDTING 978
Query: 234 T-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ G + + + + G +N TI ++++G GND ++G ++
Sbjct: 979 ADGNDDIKGNRGDDRLIGGKGRDRLNGGYENDTIFGGHGDDTLIGRLGNDQMLGGKGEDI 1038
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
G D +G +G D A + + D ++D
Sbjct: 1039 LRGGQGRDRLNGGAGNDILTGDASIDRFIFAAN----SKFSQANLGVDEITDFN 1088
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 1/129 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + T + + G GND + G N+ + GND G+ G D
Sbjct: 939 TLQGIPGDDDLIGGTGNDKINGLGGNDSLSGLGGNDTINGADGNDDIKGNRGDDRLIGGK 998
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+EN I + +++ + R L A + L
Sbjct: 999 GRDRLN-GGYENDTIFGGHGDDTLIGRLGNDQMLGGKGEDILRGGQGRDRLNGGAGNDIL 1057
Query: 372 IQVIGQDVF 380
D F
Sbjct: 1058 TGDASIDRF 1066
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 49/167 (29%), Gaps = 8/167 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D T DL E I + A V V G++ + +AN
Sbjct: 886 DFTADVETSAVGDLGPEGLKFISPEDSPNGEALLVVANEVSGTT---TIYEFTANQTLQG 942
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+D G +G D + + I D N+ + D + +
Sbjct: 943 IPGDDDLIGGTGNDKINGLGGNDSLSGLGGNDTINGADGNDDIKGNRGDDRLIGGKGRDR 1002
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGRD 396
+ + + + + LI +G D + G GRD
Sbjct: 1003 LNGGYENDT-IFGGHGDDTLIGRLGNDQMLGGKGEDILRGGQ--GRD 1046
>gi|288940023|ref|YP_003442263.1| peptidase M10 serralysin [Allochromatium vinosum DSM 180]
gi|288895395|gb|ADC61231.1| Peptidase M10 serralysin [Allochromatium vinosum DSM 180]
Length = 1019
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 13/156 (8%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--------DLNTES 249
G + S F TI S G++++D L +Y+ +L +
Sbjct: 715 NTLGSGGDTLLSIENITGSTFDDTIIASSGNNIMDGGLGSDTVSYVKSDGLVAVNLAVTT 774
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ GG K+ I IE+++GS+ ND + GN+ N G D G +G D +
Sbjct: 775 AQNTGGSGKDTLIK----IENLIGSNYNDSLTGNTGANRLDGGKGADALKGGAGDDVYVV 830
Query: 310 Y-APSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A + + + N + N + ++E +
Sbjct: 831 DNAGDVVTEAFSQGNDTVQSWINLTLGGNIENLELM 866
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 63/158 (39%), Gaps = 26/158 (16%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYID----LNTESWSSIG 254
+ N + ++D G+D + +L I+ +N + ++
Sbjct: 344 TTSINATGNTGDNLLIANVGNNVFDGVSGNDTVSYSLSSPYIASINPKSSINQSANPALA 403
Query: 255 GYEKNMTI--AQHTV---------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
G + ++ + AQ T+ I++++GS ND + GNS+ N+ G DV G G
Sbjct: 404 GVKVSLAVTGAQATIGSGMDKLNNIDNLIGSRFNDQLTGNSSANILDGGLGADVLIGGDG 463
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
D ++ + +I +A++ + D + +
Sbjct: 464 NDIYY----------VDGNDTVIETNASKTQSDTVRSI 491
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 71/197 (36%), Gaps = 21/197 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
KG G+++Y ++ + G+D + +++I+L
Sbjct: 820 KGGAGDDVYVVDNAGDVVTEAFSQ----GNDTV--------QSWINLTLGGNIENLELMY 867
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++ ++ G++ N+ + GN+ +N GNDV DG+ G D+ + +
Sbjct: 868 DKSLGDANNPKTGTGNTLNNTLTGNALSNTLSGLGGNDVLDGAGGQDSLTGGGGADRFVF 927
Query: 319 YRFENA-----IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ ++ D + D + D+ F + V +K S + Y+ L
Sbjct: 928 SVVTDTSASMPDVITDFTRSQSDKI-DLSLATFYEGVFKFVGIKAFSGVSGELRYQTLSN 986
Query: 374 V---IGQDVFESMKHFY 387
G + + F
Sbjct: 987 KTLITGDTNGDKVADFA 1003
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 58/187 (31%), Gaps = 13/187 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ G D + N + +T + +++
Sbjct: 108 GGNDTLDGKAGADIMIGGDGADTYIVDNDSDQVNETNASTG-LDQWDTVKSSVSYTLGAN 166
Query: 268 IE-------SVVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-LY 316
+E + + +GN +V+IGNSA N G+D +G +G DT+ + +
Sbjct: 167 VEQLNLTGATAINGTGNTLKNVLIGNSAANRLDGGKGDDRMEGGNGNDTYVVDSTKDEVI 226
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVI 375
+ + + ++VE L +S + L + L V
Sbjct: 227 ETSALAAGGVDTVESWISYTLTANVENLLLLGTANNSATGNTLNNRLTGNSGSNRLDGVT 286
Query: 376 GQDVFES 382
G D E
Sbjct: 287 GADTMEG 293
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 4/127 (3%)
Query: 272 VGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +GN + +IGN +N+ + G D +G G DT+ + + I+
Sbjct: 511 IHGTGNELQNTIIGNDKDNLLDGAGGADRLEGGKGNDTYLVDGFDTVIEAGSAGTDTIMT 570
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI-GQDVFESMKHFY 387
+ ++VE L + + + Y ++L+ + Y
Sbjct: 571 EVGILNNTLPTNVENLLLLGSVNLTGKGNTLANVIYANVGDNLLDGVKNTSSSSKDTLSY 630
Query: 388 EFGLSEG 394
EFG + G
Sbjct: 631 EFGATAG 637
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 26/164 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDL----LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ Y ++ KD + +GG D + TL V+N + L
Sbjct: 212 GNDTYVVDST-KDEVIETSALAAGGVDTVESWISYTLTANVENLLLL------------- 257
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T S G++ N+ + GNS +N +G D +G G D + + +
Sbjct: 258 ------GTANNSATGNTLNNRLTGNSGSNRLDGVTGADTMEGGDGQDVYVVNSADDVVIE 311
Query: 319 YRFENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + D ++VE L+ +
Sbjct: 312 TNTSTSSLQIDLVEASLSYTLTANVEWLQLMGTTSINATGNTGD 355
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 3/124 (2%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA+ + + G++ +D + G N+ +G D+ G G DT+ S
Sbjct: 86 IAKDELNNPLTGAAQSDFLHGLGGNDTLDGKAGADIMIGGDGADTYIVDNDSDQVNETNA 145
Query: 322 ENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQD 378
+ +D + ++VE+L + +++L ++ L G D
Sbjct: 146 STGLDQWDTVKSSVSYTLGANVEQLNLTGATAINGTGNTLKNVLIGNSAANRLDGGKGDD 205
Query: 379 VFES 382
E
Sbjct: 206 RMEG 209
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 1/107 (0%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++ G + + + + + + +S DD++ T IDL S S
Sbjct: 272 RLTGNSGSNRLDGVTGADTMEGGDGQDVYVVNSA-DDVVIETNTSTSSLQIDLVEASLSY 330
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
T + G++G++++I N NNVF SGND
Sbjct: 331 TLTANVEWLQLMGTTSINATGNTGDNLLIANVGNNVFDGVSGNDTVS 377
>gi|4126377|dbj|BAA36551.1| Membrane-type matrix metalloproteinase-1 [Capra hircus]
Length = 582
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 141 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADVMIFFAEGFHGDSTPFDGEGGFLAH 200
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 260
Query: 149 VDNDYEN 155
D EN
Sbjct: 261 QWMDTEN 267
>gi|73621152|sp|Q9EV33|LKA14_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762028|gb|AAG40292.1|AF314508_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 819
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 812
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 824
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 825 LVITNTKQEKVTI--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 872
>gi|87118820|ref|ZP_01074719.1| Hemolysin-type calcium-binding region, RTX [Marinomonas sp. MED121]
gi|86166454|gb|EAQ67720.1| Hemolysin-type calcium-binding region, RTX [Marinomonas sp. MED121]
Length = 692
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 79/239 (33%), Gaps = 34/239 (14%)
Query: 157 SFLTSVMSYFMPQDSMMDA-------SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+F S SY + Y AT D + + G+ I +
Sbjct: 454 TFTASTSSYISGGHGHDSFWGVQNAGEYAYLATFEGDDFYNHKSNEHGFFFNGGDGIDTV 513
Query: 210 EVQQ---KDSPFIQTIYDSGGD-----DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +DS + D G+ +DL++ V LN + ++
Sbjct: 514 SFEGLAYEDSNNYSHLVDGNGNPYANGVTIDLSVDTSVNFTFGLNEDDEDGDLTDANDVE 573
Query: 262 IAQHTVI--ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------ 313
T+I E+V+GS +D + GN+ +N+ GND +G G DT + +
Sbjct: 574 KPNATLISVENVIGSDFDDYLTGNNDDNLLMGGEGNDHLEGGEGDDTIYGGEDNDTAYYA 633
Query: 314 ---YLYKIYRFENAIIV--------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
Y I +E D D LSD+E + F + + +
Sbjct: 634 DVLDSYDINVWEEGGSTWMTIEDVGSDGINEGFDTLSDIEYVSFNGIEYSVLELATMAA 692
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ V G +G+D++I N++ F GNDV DG +G D + +
Sbjct: 144 GETKDDVSGGTGHDIIITGDKNDILFGDGGNDVLDGGNGSDILDGGNGNDTLIGGSINST 203
Query: 325 IIVYDANEHKQDF 337
+ Y QD
Sbjct: 204 GVDYLTGGGGQDI 216
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 13/72 (18%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---------- 301
+ G + I + + G GNDV+ G + +++ +GND G
Sbjct: 149 DVSGGTGHDIIITGDKNDILFGDGGNDVLDGGNGSDILDGGNGNDTLIGGSINSTGVDYL 208
Query: 302 ---SGLDTFFYY 310
G D F
Sbjct: 209 TGGGGQDIFVVS 220
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 23/67 (34%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
D V G + +++ ND+ G G D S + + +I N
Sbjct: 144 GETKDDVSGGTGHDIIITGDKNDILFGDGGNDVLDGGNGSDILDGGNGNDTLIGGSINST 203
Query: 334 KQDFLSD 340
D+L+
Sbjct: 204 GVDYLTG 210
>gi|296483589|gb|DAA25704.1| matrix metalloproteinase-14 precursor [Bos taurus]
Length = 582
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 141 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 200
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 260
Query: 149 VDNDYEN 155
D EN
Sbjct: 261 QWMDTEN 267
>gi|89094734|ref|ZP_01167669.1| type I secretion target repeat protein [Oceanospirillum sp. MED92]
gi|89080988|gb|EAR60225.1| type I secretion target repeat protein [Oceanospirillum sp. MED92]
Length = 7971
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 71/229 (31%), Gaps = 48/229 (20%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK---- 258
GN+ VQ I I+ GG D + +T GG + + L +S Y
Sbjct: 7054 GND--NFTVQSTAEGVITVIHGGGGSDTITVTGGGGASSPLILLGDSVQDGSTYTSTSDV 7111
Query: 259 --------------NMTI----AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N TI A +V+ + G GND + G++ + SGND G
Sbjct: 7112 KTDKAREFDTPNNYNDTINASGASGSVV--IYGGQGNDTLTGSNYGDHIAGGSGNDEIYG 7169
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVY----------------DANEHKQDFLSD--VE 342
G D + A L R + V DA D +
Sbjct: 7170 LGGDDHIYGDAGFNLDLTKRLSLSTQVLSVVNTADAVNDNPETSDALTVGVDTIDGGSGN 7229
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ F D+ + IL A ++ V + E + G
Sbjct: 7230 DIIFGDKGVIDQVTDTNRILTTGA----VVSVTTTNRDEVANDILKGGA 7274
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 14/150 (9%)
Query: 206 IYKIEVQQKDSPFIQ-TIYDS---GGDDLLDLTLIGGVKNYID------LNTESWSSI-- 253
+S T+ D+ GG L ++ + I L T ++I
Sbjct: 594 TITFTGDLANSDVADLTLDDTSLVGGTASLAISQYFAEDDTITNVEQAELTTGQGANIMD 653
Query: 254 -GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G+ ++T+ + + + G S D++ G S +++ +G D DG +G D +
Sbjct: 654 ASGFSGSVTLDAGSGDDILRGGSAADILKGGSGSDILSGGAGEDNIDGGTGNDIL-SESG 712
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + A + D LS +E
Sbjct: 713 DRNFYLTSASLLNASNAATSTEDDTLSGIE 742
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 9/160 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
S GD + +++ + DL ++S T+ +VI + G +G D + G+
Sbjct: 832 SSGDAITEISSLNDTSTAKDL-GLTFSGSSASVTGETLGTGSVI--LSGGAGADTITGSG 888
Query: 285 ANNVFFESSGNDVFDGSSGLDTFF--YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ G DV DG+ G D + L D L+ +E
Sbjct: 889 GADQISGGLGADVIDGNGGQDHLIETFDLNMTLSDAAPAGAHDAELVIGADAADELTSIE 948
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ D+ YT S L G+D +
Sbjct: 949 QITLTGGASDNTLDASG----YTLSSVTLATGGGKDTLKG 984
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 62/184 (33%), Gaps = 27/184 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFI---QTIYDSGGDDLLDLTLI-----GGVKNYID-LNTESW 250
G G++ TI GG D + ++ K ID ++ ++
Sbjct: 374 GGAGDDTLTGTANADSIKGGLGSDTIDGLGGSDTVVVSRDVNIELTDTKIIIDSVDEDTL 433
Query: 251 SSI------GGYEKNMTIA-----QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
S+I GG N A I+ G SG D + G++ ++ G D+ D
Sbjct: 434 SNIETASLTGGDSANTITAATFSKGGVTID---GGSGADNITGSAQADLITGGLGADIID 490
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE----RLRFADQCIDSVN 355
G G DT + + + ++ + NE L+ V L F Q ++
Sbjct: 491 GLGGTDTLVESSNGHFALVGAAASSALTSSKNETALVTLTGVTGGTFTLTFDGQTTAALA 550
Query: 356 VKQR 359
Sbjct: 551 HNAS 554
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 20/145 (13%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N ++ T ++ G +G+D + G + + G+D DG G DT S
Sbjct: 355 SGNVINASLFTGTGGVTIDGGAGDDTLTGTANADSIKGGLGSDTIDGLGGSDTVVV---S 411
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVER--------------LRFADQCIDSVNVKQR 359
I + II+ +E D LS++E F+ +
Sbjct: 412 RDVNIELTDTKIIIDSVDE---DTLSNIETASLTGGDSANTITAATFSKGGVTIDGGSGA 468
Query: 360 SILEYTASYEDLIQVIGQDVFESMK 384
+ +A + + +G D+ + +
Sbjct: 469 DNITGSAQADLITGGLGADIIDGLG 493
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 64/196 (32%), Gaps = 30/196 (15%)
Query: 203 GNNIYKIEVQQKD--SPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSSIGGYE 257
GN+ + + ++ G D L D T G + I L + +I G
Sbjct: 7531 GNDTISVSAGNDSVIGDNGRITFNLGIRDTLESTDTTNDTGGDDNISLGSGDDQAIAGVG 7590
Query: 258 KNMT---------IAQHTVIESVVGSS------------GNDVVIGNSANNVFFESSGND 296
+ I I++ G+D + G ++ F G D
Sbjct: 7591 NDTVTNESGETIIIGDDGFIQNDESGRYLNAYTDDFTLGGDDNLTGGDDRDIIFGGFGKD 7650
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
DG +G D + + R + I++ + + + L + + + +D +
Sbjct: 7651 ELDGGAGDDLMTGDSGM----VTRNPSTIVLESKDLEEINDLDGDDDILRGGEGLDRMIG 7706
Query: 357 KQRSILEYTASYEDLI 372
L Y + ED++
Sbjct: 7707 GAGGDLFYGSFSEDVM 7722
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 61/215 (28%), Gaps = 47/215 (21%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----LNTESWSSI------------ 253
E + + TI G+D++ G + D L T + S+
Sbjct: 7211 ETSDALTVGVDTIDGGSGNDII-FGDKGVIDQVTDTNRILTTGAVVSVTTTNRDEVANDI 7269
Query: 254 -GGYEKNMTIAQHTVIESVVGSSGNDVVIG--------------------------NSAN 286
G + I + + G SG D++IG N N
Sbjct: 7270 LKGGADDDIIMGGHGQDDIEGGSGADILIGDHAVVDYNDGDTDITTLDSITTVELVNGDN 7329
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL-- 344
+ + G+D+ G G D F I ++ II D V L
Sbjct: 7330 DTIKGNEGDDLIMGGIGADNLFGGNGDAGAAIVVSDDDIIFGDHATALLANNRFVRLLTK 7389
Query: 345 -RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ Q + + A +D+ G D
Sbjct: 7390 EQTEGQADLIKGNEGSDRIFGGAGADDIFGDAGGD 7424
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 15/184 (8%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y VQ ++ + + G D LD + G + +DL+ + A
Sbjct: 231 DTYSGSVQGVSFTGVENLSGTAG-DTLDYSAYG-IGVTVDLSAGVATGF---------AS 279
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFE 322
T + V GS+ +D++ GNS +N G D + D + + E
Sbjct: 280 VTGFDHVTGSAHDDIIAGNSNSNTLAGGGGTDTLVVTRDADITLSDSEVRFGSEAVGSGE 339
Query: 323 NAIIVYDANE-HKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVF 380
+ I ++A E D + + F +++ L TA+ + + +G D
Sbjct: 340 DTISGFEAAELTGGDSGNVINASLFTGTGGVTIDGGAGDDTLTGTANADSIKGGLGSDTI 399
Query: 381 ESMK 384
+ +
Sbjct: 400 DGLG 403
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 19/147 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG----------GDDLLDLTLIGGVKNYIDLNTES 249
S GN V + I D G G+D + T G + I
Sbjct: 7436 YSNGNVETFFSVDEAGDATAADIIDGGEGHNRVIAGLGEDNI--TTGSGDDHII-----G 7488
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + Y + I + +E +G +D + S +++ GND S+G D+
Sbjct: 7489 DNGVLNYGTDEVITEAYTVEHELGD--DDTIESGSGDDIVLGGKGNDTISVSAGNDSVIG 7546
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQD 336
+ + + N+ D
Sbjct: 7547 DNGRITFNLGIRDTLESTDTTNDTGGD 7573
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 56/196 (28%), Gaps = 34/196 (17%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ G + V TI SGG D + G + ID N I
Sbjct: 858 GSSASVTGETLGTGSVILSGGAGADTITGSGGADQISG---GLGADVIDGNGGQDHLIET 914
Query: 256 YEKNMTI-----AQHTVIESVVGSSGND--------VVIGNSANNVFFE----------- 291
++ NMT+ A E V+G+ D + G +++N
Sbjct: 915 FDLNMTLSDAAPAGAHDAELVIGADAADELTSIEQITLTGGASDNTLDASGYTLSSVTLA 974
Query: 292 -SSGNDVFDGSSGLDTFFYY-----APSYLYKIYRFENAI-IVYDANEHKQDFLSDVERL 344
G D G D F A + I + V + +D +
Sbjct: 975 TGGGKDTLKGGDKDDIFIIDPTGLIAGTDKVTIDVGGGSANEVKVLDSDGLVTQADFGWV 1034
Query: 345 RFADQCIDSVNVKQRS 360
F+ + + S
Sbjct: 1035 TFSGANAGTQTLSSNS 1050
Score = 38.2 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 11/190 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I+ G D LD GG + DL T + +
Sbjct: 7623 TDDFTLGGDDNLTGGDDRDIIFGGFGKDELD----GGAGD--DLMTGDSGMVTRNPSTIV 7676
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI--- 318
+ + E +D++ G + +G D+F GS D Y +
Sbjct: 7677 LESKDLEEINDLDGDDDILRGGEGLDRMIGGAGGDLFYGSFSEDVMVGEYARYTFAADAE 7736
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E A V + D + + + + I Q ++ E S + + D
Sbjct: 7737 TSGEQATFVITLAQGGLDLIRSSQIGLY--KSIAQQIFDQSALGEVARSRTAVSTELTDD 7794
Query: 379 VFESMKHFYE 388
++ +
Sbjct: 7795 ALAALGRLVD 7804
>gi|11762044|gb|AAG40300.1|AF314516_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 819
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 812
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 824
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 825 LVITNTKQEKVTI--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 872
>gi|74218057|dbj|BAE42011.1| unnamed protein product [Mus musculus]
Length = 465
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 62/209 (29%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
D LL W++ + Y+ T ++ + A WS
Sbjct: 93 VPDSGDFLLTPGSPKWTHTNLTYRIINHTPQLSRAEV-------KTAIEKAFHVWSVASP 145
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF E +DI +N P + +FD + W
Sbjct: 146 LTFTEILQGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWT-Q 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
K L A HE GH+LGL H YP Y Y S +Y +PQD
Sbjct: 205 DSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSLPQD-- 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG
Sbjct: 253 --------------DINGIQTIYGPSDNP 267
>gi|73621153|sp|Q9EV32|LKA16_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762030|gb|AAG40293.1|AF314509_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 819
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 812
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 824
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 825 LVITNTKQEKVTI--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 872
>gi|119384399|ref|YP_915455.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119374166|gb|ABL69759.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 260
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 6/140 (4%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y + + T+Y G+D L+ GG + G N
Sbjct: 87 DRLYGGNGRDELEGGAGNDTLYGGDGNDELE----GGAGADRLYAGAGRDELEGGAGNDI 142
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G SGND + G + + GND+ G +G D F + I F
Sbjct: 143 LYGGAGNDELDGGSGNDRLNGGNGRDRLEGGRGNDILTGGAGADVFEFERGDGRDTITDF 202
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+N + D ++ + + +
Sbjct: 203 QNGMDRLDFDDFSRTQVQAI 222
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 16/166 (9%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS-IGGYEKNMT 261
+ + T+ G+D L+ G +L + + + G + N
Sbjct: 56 FGGNDRLHGGDGDDTLKGGNGNDELEGGRGNDRLYGGNGRDELEGGAGNDTLYGGDGNDE 115
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-------APSY 314
+ + + +G D + G + N++ + +GND DG SG D
Sbjct: 116 LEGGAGADRLYAGAGRDELEGGAGNDILYGGAGNDELDGGSGNDRLNGGNGRDRLEGGRG 175
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDV----ERLRFADQCIDSVNV 356
+ A + +D ++D +RL F D V
Sbjct: 176 NDILTGGAGADVFEFERGDGRDTITDFQNGMDRLDFDDFSRTQVQA 221
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 1/129 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + T+ + + G GND + G + + +GND G G D A
Sbjct: 62 LHGGDGDDTLKGGNGNDELEGGRGNDRLYGGNGRDELEGGAGNDTLYGGDGNDELEGGAG 121
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + N+ + E L R LE + L
Sbjct: 122 ADRLYAGAGRDELEGGAGNDILYGGAGNDE-LDGGSGNDRLNGGNGRDRLEGGRGNDILT 180
Query: 373 QVIGQDVFE 381
G DVFE
Sbjct: 181 GGAGADVFE 189
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 33/113 (29%), Gaps = 1/113 (0%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G++ DV+ G + N+ G+D G G D K + + N
Sbjct: 27 IGTNFGDVLNGTTFNDWLSGLGGHDQLSGFGGNDRLHGGDGDDTLKGGNGNDELEGGRGN 86
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ E A LE A + L G+D E
Sbjct: 87 DRLYGGNGRDELEGGAGNDTLYGGDGN-DELEGGAGADRLYAGAGRDELEGGA 138
>gi|291302210|ref|YP_003513488.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290571430|gb|ADD44395.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 724
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 57/189 (30%), Gaps = 14/189 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
NN+ ++ G+D + Y D E + I G + I
Sbjct: 293 NNLAGGGGDDNIETTGGKVFGGDGNDTIK-AGDHDNPFYRD-KPEHSTDIYGGAGDDKIT 350
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
E++VG G+D + G ++ + GND G++G D ++
Sbjct: 351 GSDQNETIVGGGGDDEISGRGGTDIISGNKGNDEIYGNAGNDNIAGGDGRDYIDGQDGDD 410
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-- 381
I D + + D LE +D+ G+DV
Sbjct: 411 HIT----GGADNDTIYGL------DGRDIMSGDGGDDYLEGGTGNDDINGGDGKDVVSGG 460
Query: 382 SMKHFYEFG 390
F E G
Sbjct: 461 RDNDFLEGG 469
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 19/178 (10%)
Query: 205 NIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+IY K S +TI GGDD + + GG I G + N I
Sbjct: 339 DIYGGAGDDKITGSDQNETIVGGGGDDEI--SGRGGTDI-----------ISGNKGNDEI 385
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ +++ G G D + G ++ + ND G G D Y
Sbjct: 386 YGNAGNDNIAGGDGRDYIDGQDGDDHITGGADNDTIYGLDGRDIMSGDGGDD----YLEG 441
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+D +S F + + + + E + QD
Sbjct: 442 GTGNDDINGGDGKDVVSGGRDNDFLEGGKGDDTIYAGHGKDLIDAGEGTDKAFVQDED 499
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ IY + G+D + G ++YID I G N TI + + G
Sbjct: 377 SGNKGNDEIYGNAGNDNI---AGGDGRDYIDGQDGDD-HITGGADNDTIYGLDGRDIMSG 432
Query: 274 SSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G+D + G + N+ G ND +G G DT + L +
Sbjct: 433 DGGDDYLEGGTGNDDINGGDGKDVVSGGRDNDFLEGGKGDDTIYAGHGKDLIDAGEGTDK 492
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSV 354
V D + D V+++ D V
Sbjct: 493 AFVQDEDYVDPDKDDKVQKVEVKDTSFIDV 522
>gi|218703771|ref|YP_002411290.1| adhesin for cattle intestine colonization [Escherichia coli UMN026]
gi|218430868|emb|CAR11742.1| adhesin for cattle intestine colonization [Escherichia coli UMN026]
Length = 6925
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 6701 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 6754
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 6755 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 6814
Query: 319 YRFENAII 326
+ ++
Sbjct: 6815 GGNGSDVV 6822
>gi|254463006|ref|ZP_05076422.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
HTCC2083]
gi|206679595|gb|EDZ44082.1| hemolysin-type calcium-binding region [Rhodobacteraceae bacterium
HTCC2083]
Length = 773
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 5/166 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+Y GG D L+ GG N S GG N +I + + + G G D
Sbjct: 148 DIVYGGGGSDTLE----GGSGNDTLYGDTDDVSPGGAPGNDSILGGSGNDVIFGEGGADS 203
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFL 338
+ G+ A + GND G +G DT + + I A++ D+
Sbjct: 204 IRGDGAADEIDGGEGNDTIAGDAGADTIRGGLGNDSIDGNDGNDLIGADQASDSSTLDWG 263
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ E FA + A +Q G + +
Sbjct: 264 TLDENGSFAITGASETMNVTITTTTNGAGQTANVQSQGSPAADGLW 309
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 14/170 (8%)
Query: 199 KGSLGNNIYKIEVQ---QKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIG 254
+ G + PF+Q I+ + + + GV N +D
Sbjct: 383 NANTGVETTGADDSVTVDIADPFVQLIFTFDNGESASNSGLFGVGNMTLDFTV----DYD 438
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N I +++ +G+D + G ++ +GND F+ G DT
Sbjct: 439 AEPGNDAINGGAGNDTIFAGNGDDSISGGIGSDSLDGQAGNDFFNVGEG-DTAIGGDGDD 497
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
++I F+ E ++ + R+ + Y
Sbjct: 498 YFQIVELS-----ETPGAGANIFIQGDEGDETTGDTLNLGTLGDRNEIVY 542
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 16/139 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI----DLNTESWSSIGGYEKNMTIA 263
+ + ++T +G DD + + + I + + S S + G NMT+
Sbjct: 377 DLNADGNANTGVET---TGADDSVTVDIADPFVQLIFTFDNGESASNSGLFG-VGNMTLD 432
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ GND + G + N+ F +G+D G G D+ A + + + +
Sbjct: 433 FTVDYD---AEPGNDAINGGAGNDTIFAGNGDDSISGGIGSDSLDGQAGNDFFNVGEGDT 489
Query: 324 AIIVYDANEHKQDFLSDVE 342
AI D+ VE
Sbjct: 490 AI-----GGDGDDYFQIVE 503
>gi|74214893|dbj|BAE33455.1| unnamed protein product [Mus musculus]
Length = 465
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 62/209 (29%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
D LL W++ + Y+ T ++ + A WS
Sbjct: 93 VPDSGDFLLTPGSPKWTHTNLTYRIINHTPQLSRAEV-------KTAIEKAFHVWSVASP 145
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF E +DI +N P + +FD + W
Sbjct: 146 LTFTEILQGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWT-Q 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
K L A HE GH+LGL H YP Y Y S +Y +PQD
Sbjct: 205 DSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSLPQD-- 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG
Sbjct: 253 --------------DINGIQTIYGPSDNP 267
>gi|126723161|ref|NP_001075749.1| stromelysin-1 preproprotein [Oryctolagus cuniculus]
gi|116859|sp|P28863|MMP3_RABIT RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; AltName:
Full=Transin-1; Flags: Precursor
gi|165710|gb|AAA31467.1| metalloproteinase synovial cell activator precursor [Oryctolagus
cuniculus]
Length = 478
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 59/202 (29%), Gaps = 56/202 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W+ + Y+ T AL W +V LTF +DI
Sbjct: 110 WTKTHLTYRIVNYTPDLPR-------DAVDAAIEKALKVWEEVTPLTFSRKYEGEADIMI 162
Query: 82 ISS-----------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ Y P + + +FD + W GT L A
Sbjct: 163 SFGVREHGDFIPFDGPGNVLAHAYAPGPGING----DAHFDDDEQWTKDT-TGTNLFLVA 217
Query: 125 LHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HE+GH+LGL H + YPVY D F S
Sbjct: 218 AHELGHSLGLFHSANPEALMYPVYNAFTDLAR--FRLS---------------------- 253
Query: 184 MVSDIVAVQKIYGAPKGSLGNN 205
D+ +Q +YG S N+
Sbjct: 254 -QDDVDGIQSLYGPAPASPDNS 274
>gi|170063966|ref|XP_001867332.1| matrix metalloproteinase-26 [Culex quinquefasciatus]
gi|167881407|gb|EDS44790.1| matrix metalloproteinase-26 [Culex quinquefasciatus]
Length = 667
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 72/236 (30%), Gaps = 59/236 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIK 80
W + Y I + + + A EWS+V +L F E + +DI+
Sbjct: 466 WHKSTLTYAIANYHVGHPYSTI-------RALIQQAFHEWSRVTNLDFVEVGDTDSADIE 518
Query: 81 FISS-------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
G YD + F +++F+ + G A+HE
Sbjct: 519 LKFGGKHHQMWNGQCSFEGGNTLAHAYDPQ-FGDVHFNTQYYFDEG-NSLNDFLETAVHE 576
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
IGH+LGL H S S+M P + + P D
Sbjct: 577 IGHSLGLGHILS-------------------SASIM---HPIATKVFTK------PQPID 608
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ VQ +YG ++ + K + D G + G + I
Sbjct: 609 VQLVQALYGVRNSYSSSSPHTFCSLTKIDAVFK---DDSGKTYV----FAGTTSTI 657
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 45/154 (29%), Gaps = 45/154 (29%)
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
ALHEIGH+LGL H S S+M AS
Sbjct: 214 DFLDTALHEIGHSLGLDHINS-------------------EASLM--------HPTASNQ 246
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYK--------IEVQQKDSPFIQTIYDSGGDDL 230
+ P DI +Q +YG G+ Y+ E+ IY GD
Sbjct: 247 FTK-PQPIDIEHIQALYGVRN---GSGTYRSAPKFCSLREIDAVFEDVFGKIYAFAGDYF 302
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
DL+ I S G + A
Sbjct: 303 YDLSDEDPEGQLIS------SKWPGLPGGIDAAF 330
>gi|37589932|gb|AAH40507.2| MMP17 protein [Homo sapiens]
Length = 606
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSI-HSDIKFI 82
P LS+ + +P + R +AL WS + L F E + +DI+
Sbjct: 132 APTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQID 191
Query: 83 SS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALH 126
S N+GY + + +FD + W + G L A+H
Sbjct: 192 FSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 251
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 252 EFGHAIGLSH 261
>gi|73621159|sp|Q9EV27|LKA2E_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|73621161|sp|P0C085|LKA7B_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762042|gb|AAG40299.1|AF314515_1 leukotoxin [Mannheimia haemolytica]
gi|16033547|gb|AAL13281.1|AF414141_2 LktA [Mannheimia haemolytica]
Length = 953
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 819
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 812
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 824
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 825 LVITNTKQEKVTI--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 872
>gi|167426692|ref|ZP_02318445.1| putative phage minor structural protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167054295|gb|EDR64114.1| putative phage minor structural protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
Length = 2212
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + L + G + ID++ +S +
Sbjct: 1275 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 1334
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 1335 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 1392
Query: 312 PSYL 315
Sbjct: 1393 GLAQ 1396
Score = 43.6 bits (101), Expect = 0.099, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 1696 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 1752
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 1753 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 1801
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 1802 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 1856
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 1857 VEDSQITFDELFSLRPYSD 1875
>gi|294676422|ref|YP_003577037.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294475242|gb|ADE84630.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 358
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 70/222 (31%), Gaps = 19/222 (8%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI 243
A +I+G G LG +IY TI+ G+DLL D L G +
Sbjct: 44 AAADRIFG---GELGEHIYG-------RAGADTIFAGAGNDLLRGGDGDDVLFGDTGADV 93
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G N + + + G GND + G + + G DV G G
Sbjct: 94 LWGDLGADNLAGGRGNDMLHGGCGADRLFGDFGNDTLEGGAQADQLTGGDGRDVLLGGEG 153
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE-RLRFADQCIDSVNVKQRSIL 362
D + + + N+ D +D + L D D++ +
Sbjct: 154 NDLLLGGDGADSLTGGAGNDRSRGGEGNDLLSDDGTDADADLLCGDAGNDTLVGGNGADS 213
Query: 363 EYTASYEDLI---QVIGQDVFESMKHFYEFGLSEGRDITFDS 401
Y S D+I V EG D F S
Sbjct: 214 LYGGSGNDVIRDTWVQDASGLLVADDAARIDAGEGDDTIFAS 255
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 54/168 (32%), Gaps = 17/168 (10%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D L+ D + G E N + +S+ G +GND G N
Sbjct: 126 GNDTLEGGAQADQLTGGDGRD----VLLGGEGNDLLLGGDGADSLTGGAGNDRSRGGEGN 181
Query: 287 NVFF------------ESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANEH 333
++ +GND G +G D+ + + + + + + + ++ +
Sbjct: 182 DLLSDDGTDADADLLCGDAGNDTLVGGNGADSLYGGSGNDVIRDTWVQDASGLLVADDAA 241
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D + + + + I+ A L V +
Sbjct: 242 RIDAGEGDDTIFASGADTIVTGAGEDVIVIGAAGDTALATSAAVTVTD 289
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 19/147 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG---GYEKNMTIAQHTVIESV 271
++ G+D GG N + + + + G N T+ +S+
Sbjct: 159 GGDGADSLTGGAGND----RSRGGEGNDLLSDDGTDADADLLCGDAGNDTLVGGNGADSL 214
Query: 272 VGSSGNDVVIGNSANN-----------VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
G SGNDV+ + G+D +SG DT A + I
Sbjct: 215 YGGSGNDVIRDTWVQDASGLLVADDAARIDAGEGDDTIF-ASGADTIVTGAGEDVIVIGA 273
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFA 347
+ + A DFL + +F
Sbjct: 274 AGDTALATSAAVTVTDFLVGTDSFQFD 300
Score = 40.1 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 28/109 (25%), Gaps = 1/109 (0%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G++ D + G + +G D +G D + ++ D
Sbjct: 41 WGTAAADRIFGGELGEHIYGRAGADTIFAGAGNDLLRGGDGDDVL-FGDTGADVLWGDLG 99
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ L LE A + L G+DV
Sbjct: 100 ADNLAGGRGNDMLHGGCGADRLFGDFGNDTLEGGAQADQLTGGDGRDVL 148
>gi|160333381|ref|NP_032637.3| neutrophil collagenase precursor [Mus musculus]
gi|3327014|emb|CAA73786.1| collagenase-2 [Mus musculus]
gi|26354354|dbj|BAC40805.1| unnamed protein product [Mus musculus]
gi|27503132|gb|AAH42742.1| Matrix metallopeptidase 8 [Mus musculus]
gi|74192000|dbj|BAE32938.1| unnamed protein product [Mus musculus]
gi|74210332|dbj|BAE23365.1| unnamed protein product [Mus musculus]
gi|148692990|gb|EDL24937.1| matrix metallopeptidase 8 [Mus musculus]
Length = 465
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 62/209 (29%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
D LL W++ + Y+ T ++ + A WS
Sbjct: 93 VPDSGDFLLTPGSPKWTHTNLTYRIINHTPQLSRAEV-------KTAIEKAFHVWSVASP 145
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF E +DI +N P + +FD + W
Sbjct: 146 LTFTEILQGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWT-Q 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
K L A HE GH+LGL H YP Y Y S +Y +PQD
Sbjct: 205 DSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSLPQD-- 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG
Sbjct: 253 --------------DINGIQTIYGPSDNP 267
>gi|1705991|sp|Q10835|MMP13_XENLA RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|1129121|gb|AAA83996.1| collagenase 3 [Xenopus laevis]
Length = 469
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 52/190 (27%), Gaps = 45/190 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKF 81
W + Y+ T + ++ + AL WS V L F + +DI
Sbjct: 111 WPRNNLTYRIVNYTPDLSTSEV-------DRAIKKALKVWSDVTPLNFTRLRTGTADIMV 163
Query: 82 ISS---NNGYVCTPRYDSR---YFMEINFDKADV------WRYGIGKGTILSHNALHEIG 129
+ Y D F D KG L A HE G
Sbjct: 164 SFGKKEHGDYYPFDGPDGLLAHAFPPGEKLGGDTHFDDDEMFSTDNKGYNLFVVAAHEFG 223
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HALGL H S+M P + + S D+
Sbjct: 224 HALGLDHSRDPG-------------------SLM---FPVYTYTETSRFVLP---DDDVQ 258
Query: 190 AVQKIYGAPK 199
+Q +YG
Sbjct: 259 GIQVLYGPGN 268
>gi|261244996|ref|NP_001159653.1| matrix metalloproteinase-14 [Ovis aries]
gi|256665391|gb|ACV04841.1| membrane-inserted matrix metallopeptidase 14 [Ovis aries]
Length = 582
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 141 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 200
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 260
Query: 149 VDNDYEN 155
D EN
Sbjct: 261 QWMDTEN 267
>gi|77747696|ref|NP_779625.2| bacteriocin [Xylella fastidiosa Temecula1]
gi|307578304|gb|ADN62273.1| bacteriocin [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 1406
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 35/196 (17%)
Query: 246 NTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
E+ SS+G G N T+ + ++G G+D + G+ N++ +G+DV DG
Sbjct: 1023 TPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDTLYGSGGNDLLLGGAGDDVLDGG 1082
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRF------------ 346
+G + A + + K+ + ++ + D L + F
Sbjct: 1083 TGSNRLEGGAGNDVLKVSYWSADNVLNGGS--GDDLLYGSAYADTYLFNKGDGHDTIIEQ 1140
Query: 347 -ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDITFDSYLY 404
D + + + +D++ +G +K + DS Y
Sbjct: 1141 SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWL------------DSNGY 1188
Query: 405 LGSYDDLRNVFGSDRG 420
+D+ + +D
Sbjct: 1189 RNGNNDIEQIVFADGT 1204
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 84/311 (27%), Gaps = 87/311 (27%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+GG ++ ND SY+ + + S D+ +YG+
Sbjct: 1080 DGGTGSNRLEGGAGNDVLKV---SYWSADNVLNGGSG--------DDL-----LYGSAYA 1123
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTESW 250
+ Y TI + GDD L L G +DL
Sbjct: 1124 ----DTYLFN----KGDGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHD 1175
Query: 251 S-------SIGGYEKN------MTIAQHTVIE---------SVVGSSGNDVVIGNSA--- 285
S GY + A T+ + +G+ GND + G
Sbjct: 1176 SIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDI 1235
Query: 286 ---------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIY 319
+N +GND V +G SG DT + A + Y
Sbjct: 1236 LLGGDGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDTLYGSAYADTYLFN 1295
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + D L E L + C + + + +
Sbjct: 1296 KGDGHDTI--IEQSGDDKLVFGEGLHREEACFTRSGDDLSILFNGSEDQVTVAGWFSEAA 1353
Query: 380 FESMKHFYEFG 390
+ ++ G
Sbjct: 1354 HQVESLVFQDG 1364
Score = 38.2 bits (87), Expect = 4.2, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 12/99 (12%)
Query: 271 VVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAII 326
+ G SG+D + G++ + F + G+D SG D + R + +
Sbjct: 1274 LNGGSGDDTLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGEGLHREEACFTRSGDDLS 1333
Query: 327 VYDANEHKQDFLSD--------VERLRFADQCIDSVNVK 357
+ Q ++ VE L F D + S V+
Sbjct: 1334 ILFNGSEDQVTVAGWFSEAAHQVESLVFQDGTVLSGEVE 1372
>gi|72383812|ref|YP_293166.1| VCBS [Ralstonia eutropha JMP134]
gi|72123155|gb|AAZ65309.1| VCBS [Ralstonia eutropha JMP134]
Length = 1883
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 4/145 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNS 284
G DLLD + G + T+S ++ + + T +E V+GS+ ND + G++
Sbjct: 1687 GIDLLDFSDATGAIAFTL--TQSITNTVVNLTGVGLGSDTYRNMEGVIGSAFNDTLTGST 1744
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+V +GND G G D A + + A+ D ++D +
Sbjct: 1745 GNDVLRGGAGNDTLLGGDGNDMLIGGAGADTLTGGAGSDTFAFLRADAASVDTITDFDAK 1804
Query: 345 RFADQCIDSVNVKQRSILEYTASYE 369
A S + T++
Sbjct: 1805 PVASGGDILDLADLLSGMSVTSANA 1829
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 10/160 (6%)
Query: 241 NYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N ID T + SS I N ++ + V G +G+D++ G S ++ +G D+
Sbjct: 8 NGIDNITGTASSDTILSGNGNDYVSAGAGNDYVDGGNGDDIIEGGSGDDTLLGGNGKDLV 67
Query: 299 DGSSGLDTFFYYAPSYL------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G G DT + ++ D L +AD +
Sbjct: 68 FGGLGNDTLLGGNGVDAVYGGSGDDVIGSPGDGTTSAGTDNGGDTLYGDGFDTYADLLLG 127
Query: 353 SVNVKQRSILE--YTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + + Y + +DLI + + +G
Sbjct: 128 RGHESLQPGNDRIYGGNGDDLIYGDNGNNAAVGGNDVIYG 167
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 45/125 (36%), Gaps = 7/125 (5%)
Query: 200 GSLGNNIYKIEVQQKDS----PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+++ S T+Y G D DL L G ++ N + G
Sbjct: 87 GGSGDDVIGSPGDGTTSAGTDNGGDTLYGDGFDTYADLLLGRGHESLQPGNDRIYGGNGD 146
Query: 256 ---YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
Y N A + + G +GND + G N+V +G D G G D F Y A
Sbjct: 147 DLIYGDNGNNAAVGGNDVIYGGNGNDTIYGEGGNDVIQGGAGADTLSGGDGNDVFAYAAV 206
Query: 313 SYLYK 317
S
Sbjct: 207 SDSTA 211
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 4/116 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
F T+ D G + N + N S + G + + + +
Sbjct: 1513 TSNGSVGTFSYTVSDGAGGT----STATVTVNVVSTNGGSHVELTGNYQASYLDGGSNGD 1568
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
S+ G+ D G +A + +GNDV G +G D A + I
Sbjct: 1569 SLTGAGAGDTFFGGAAADTLIGGAGNDVLRGGAGNDNLDGGAGIDMLDFSDATGGI 1624
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 2/141 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G I ++++ +GND V + N+ +G+D+ +G SG DT
Sbjct: 3 TLNGTNGIDNITGTASSDTILSGNGNDYVSAGAGNDYVDGGNGDDIIEGGSGDDTLLGGN 62
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE--YTASYE 369
L + ++ + + D D + L +Y
Sbjct: 63 GKDLVFGGLGNDTLLGGNGVDAVYGGSGDDVIGSPGDGTTSAGTDNGGDTLYGDGFDTYA 122
Query: 370 DLIQVIGQDVFESMKHFYEFG 390
DL+ G + + G
Sbjct: 123 DLLLGRGHESLQPGNDRIYGG 143
>gi|157817855|ref|NP_001100270.1| matrix metalloproteinase-20 [Rattus norvegicus]
gi|149020723|gb|EDL78528.1| matrix metalloproteinase 20 (enamelysin) (predicted) [Rattus
norvegicus]
Length = 482
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 63/196 (32%), Gaps = 49/196 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ ++ + S TE++ AL WS V L F S +DI
Sbjct: 116 WKKNILTYR---VSKYTPSMSPTEVDK----AVHMALHAWSTAVPLIFVRINSGEADIMI 168
Query: 82 ISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD A+ W G G L A HE
Sbjct: 169 SFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN-GFNLFTVAAHEF 227
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H + YP Y N Y F D
Sbjct: 228 GHALGLGHSTDPSALMYPTYKYQNPYR----------------------FHLP----KDD 261
Query: 188 IVAVQKIYGAPKGSLG 203
+ +Q +YG K G
Sbjct: 262 VKGIQALYGPRKTFPG 277
>gi|28871227|ref|NP_793846.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28854477|gb|AAO57541.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 1610
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N+ Y + + +D +I + + + ++ G E N
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEAN 390
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I E + G +G D + G + +++ +G D +G +G DTF + + Y+
Sbjct: 391 DVITGGAAHELIFGLAGKDTLNGGTGDDILVGGAGADKLNGGAGADTFRFDQLTDSYRTA 450
Query: 320 RFENAIIVYDAN 331
++ D N
Sbjct: 451 TTSATDLLTDFN 462
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D L + LNT + + GG + + T E++ GS D + GN
Sbjct: 1419 DGNDTASY-LFASAGVTVALNTSAQQATGG--SGLDTLKGT--ENLTGSQFADSLTGNKN 1473
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
NV +GND G +G D + + + + +E +D L D+
Sbjct: 1474 ANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIGGTGADRYVFNSIDEVGRDGLRDI 1529
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+S++ G I E++ G+ GND ++G ++ +G DV +G +G D
Sbjct: 779 ADSFAINVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAGRDA 838
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ A + + ++ YDA+ D + D
Sbjct: 839 LYGGADTDTFVYSTLTDSYRDYDASGLTATDTIFDF 874
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 5/118 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 534 TEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLTGGAGADVFVYSSR 593
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y+ Y ++ DF +R+ + + + L Y + D
Sbjct: 594 LDSYRNYTAGG----PKQSDTIVDFNVAEDRIDLSAIGLRGPGDGSANTL-YLSLNGD 646
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D +IG++ N++ G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDGNDIYVVDNSLDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ ++VE L
Sbjct: 1287 VSSVSWTLGANVENLLLTGVSAIDGTGNA 1315
>gi|331015752|gb|EGH95808.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 1610
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N+ Y + + +D +I + + + ++ G E N
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEAN 390
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I E + G +G D + G + +++ +G D +G +G DTF + + Y+
Sbjct: 391 DVITGGAAHELIFGLAGKDTLNGGTGDDILVGGAGADKLNGGAGADTFRFDQLTDSYRTA 450
Query: 320 RFENAIIVYDAN 331
++ D N
Sbjct: 451 TTSATDLLTDFN 462
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 6/147 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D L + LNT + + GG + + T E++ GS D + GN
Sbjct: 1419 DGNDTASY-LFASAGVTVALNTSAQQATGG--SGLDTLKGT--ENLTGSQFADSLTGNKN 1473
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NV +GND G +G D + + + + +E +D L D+
Sbjct: 1474 ANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIGATGADRYVFNSIDEVGRDGLRDI-ING 1532
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLI 372
F D ++ T +++
Sbjct: 1533 FKVGEGDKLDFTGFDARPLTDTHDAFT 1559
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+S++ G I E++ G+ GND ++G ++ +G DV +G +G D
Sbjct: 779 ADSFAVNVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAGRDA 838
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ A + + ++ YDA D + D
Sbjct: 839 LYGGADTDTFVYSTLTDSYRDYDAGGLTATDTIFDF 874
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 5/118 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 534 TEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLTGGAGADVFVYSSR 593
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y+ Y ++ DF +R+ + + + + L Y + D
Sbjct: 594 LDSYRNYTAGG----PKQSDTIVDFNVAEDRIDLSAIGLRGLGDGSANTL-YLSLNGD 646
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D +IG++ N++ G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ ++VE L
Sbjct: 1287 VSSVSWTLGANVENLLLTGVSAIDGTGNA 1315
>gi|170722971|ref|YP_001750659.1| outer membrane adhesin-like protein [Pseudomonas putida W619]
gi|169760974|gb|ACA74290.1| outer membrane adhesin like proteiin [Pseudomonas putida W619]
Length = 2524
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ I +++GS D +IGNSA+NV +GNDV G G D S + + ++
Sbjct: 2358 SGIYNLIGSDFGDTLIGNSADNVLNGGAGNDVLTGGGGNDILTGGNGSDTFVWQKNDSGH 2417
Query: 326 IVYDANEHKQDFL 338
+ D L
Sbjct: 2418 DTLNDFTPGSDKL 2430
>gi|11762064|gb|AAG40310.1|AF314526_1 leukotoxin [Bibersteinia trehalosi]
Length = 955
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 725 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 784
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 785 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 821
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 713 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 769
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 770 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 814
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 711 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 766
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 767 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 826
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 827 LVITNTKQEKVTI--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 874
>gi|27806001|ref|NP_776815.1| matrix metalloproteinase-14 precursor [Bos taurus]
gi|75056123|sp|Q9GLE4|MMP14_BOVIN RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
gi|11055605|gb|AAG28170.1|AF290429_1 membrane-type matrix metalloprotease 1 [Bos taurus]
Length = 582
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 141 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 200
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 260
Query: 149 VDNDYEN 155
D EN
Sbjct: 261 QWMDTEN 267
>gi|73620926|sp|P55117|LKTA_PASTR RecName: Full=Leukotoxin; Short=Lkt
gi|11762058|gb|AAG40307.1|AF314523_1 leukotoxin [Bibersteinia trehalosi]
gi|11762060|gb|AAG40308.1|AF314524_1 leukotoxin [Bibersteinia trehalosi]
gi|11762062|gb|AAG40309.1|AF314525_1 leukotoxin [Bibersteinia trehalosi]
Length = 955
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 725 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 784
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 785 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 821
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 713 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 769
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 770 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 814
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 711 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 766
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 767 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 826
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 827 LVITNTKQEKVTI--QNWFREAEFAKTIRNYVATRDDKIEEIIGQNGERI 874
>gi|229588904|ref|YP_002871023.1| putative hemolysin-like protein [Pseudomonas fluorescens SBW25]
gi|229360770|emb|CAY47628.1| putative hemolysin-like protein [Pseudomonas fluorescens SBW25]
Length = 512
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 91/269 (33%), Gaps = 21/269 (7%)
Query: 133 GLMHPG--SYNGGYPVYGVDNDYEND-SFLTSVMSYFMPQD-SMMDASFGYCATPMVSDI 188
GL P ++ P+ + + ND + S S + S ++ +
Sbjct: 35 GLAKPPHLKFHTVPPIQAHQHVFLNDGNVKASGQSLWEQGYPSPLNQRLVLETGDQADQV 94
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDS-PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
Q YG + + +Y K+ + GG+D ++++ V I + T
Sbjct: 95 HISQTHYGQLNIRVNDQLYHFASHDKEGQALKFHLKTHGGND--NVSIDANVMQPITIET 152
Query: 248 E----------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
++ + G N + + + G+ G+D+++G +NV + ++GND
Sbjct: 153 GDGDDWVRAGGGYTRVFGGNGNDVVRLGSGMGYAEGNDGDDIIMGGPGDNVVYGNNGNDR 212
Query: 298 FDGSSG--LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+G + + ++Y ++ D L ++ F
Sbjct: 213 LYAGAGPRHKKSYMDGGNGNDQLYAGNGHTVLQGGT--GNDRLIGHDQTTFYTGIGADTV 270
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ R A D I+ + V ++
Sbjct: 271 IANRPGDAIYAKASDTIKHLNGSVLTAVS 299
>gi|294677437|ref|YP_003578052.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294476257|gb|ADE85645.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 2065
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 72/197 (36%), Gaps = 12/197 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
E T+ GDD LD +L GG N L E ++ G N ++
Sbjct: 1635 EDTITGGEGNDTLLGGAGDDSLDGGNSSDSLDGGAGNDTLLGGEGNDTLLGGAGNDSLDG 1694
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +++ G +G+D +IG ++ GND+ G +G DT A ++
Sbjct: 1695 GSASDTLDGGAGDDTLIGGEGDDSILGGDGNDLASGGTGQDTIRGGAGDDTITGDDGDDR 1754
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D LS + D + + + ++ +D I +
Sbjct: 1755 LY----GDAGNDSLSGGQGQDLLDGGVGNDTLIGGDGVDTLLGGDDRDVFIVVNRDGGNH 1810
Query: 385 HFYEFGLSEGRDITFDS 401
F + +EG D FD+
Sbjct: 1811 DFIDG--NEGGD-DFDT 1824
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 60/191 (31%), Gaps = 12/191 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYE- 257
GN + + ++ + + + G DL+D G ID N G +
Sbjct: 1276 GNVVGTLTFTNIENIIVDRDGIVTGTDGADLIDYDYTGDPDGDRIDHNDALIPGDGPQDD 1335
Query: 258 ------KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N TI ++V +G+D + S ++ GND G G DT A
Sbjct: 1336 RVVAGAGNDTIRSGVGNDTVNAGTGDDSIEAGSGDDSVLGGEGNDTILGERGDDTLDGGA 1395
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ I+ A D S ++ + + + + L
Sbjct: 1396 GNDSIT-GGLDDDSILGGAGNDILDGRSGLDTIDGGEGNDSIDGGDGNDSVSGGTGNDTL 1454
Query: 372 IQVIGQDVFES 382
+G D
Sbjct: 1455 YGELGNDTLTG 1465
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 44/148 (29%), Gaps = 13/148 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ IY SP T T+ GG N + + + G N I
Sbjct: 1571 DTIYADNGPGTTSPTEVTDDTDPVPQNGRDTVRGGEGNDVIYGGDDDDLLSGDNGNDWID 1630
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSSGLDTFFYYAPSY 314
+++ G GND ++G + ++ +GND G G DT A +
Sbjct: 1631 GGIDEDTITGGEGNDTLLGGAGDDSLDGGNSSDSLDGGAGNDTLLGGEGNDTLLGGAGND 1690
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ D L E
Sbjct: 1691 SLD----GGSASDTLDGGAGDDTLIGGE 1714
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 225 SGGDDLLDLTLIGG-VKNYIDLNT---ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ G DL+D G + ID N + S+ N TI ++V G GND++
Sbjct: 165 TAGADLIDTGYTGDPEGDRIDANDYRGGNADSVVAGAGNDTIRSGAAADTVHGEDGNDLI 224
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
G + N++ + +G+D F G +G DTF + + A+
Sbjct: 225 DGGADNDLLYGGAGDDTFVGGAGNDTFNGGTGLDVIDYSKSGAAV 269
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 5/111 (4%)
Query: 220 QTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ GDD + ++ GG + ++ G + N T+ + VG
Sbjct: 927 DTVLAGLGDDTVTAGTGHDSVDGGAGDDSLSGEGGADTLRGGDGNDTLDGGDDNDLAVGG 986
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
G+D++IG N+ +GND G +G D+ S + + I
Sbjct: 987 KGDDLLIGGLGNDTLEGGAGNDTAQGGAGDDSLTTGLGSDRAEGGDGNDYI 1037
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 2/115 (1%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D + L G + I + + G + T+ T +SV G +G+D + G
Sbjct: 904 DGNDAI-LPGDGPNDDRIRAGAGDDTVLAGL-GDDTVTAGTGHDSVDGGAGDDSLSGEGG 961
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ GND DG D L + + N+ Q D
Sbjct: 962 ADTLRGGDGNDTLDGGDDNDLAVGGKGDDLLIGGLGNDTLEGGAGNDTAQGGAGD 1016
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 8/136 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-------SSIGGYEKNMTI 262
+ + G+D++ L V + I++ + +I G E N I
Sbjct: 1109 DDTITSGEGSDVVDGGAGNDIIYGGLGPTVPDIINIPDATDLVQNNGMDTIHGGEGNDVI 1168
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +GND + G + F +GND G +G D + +
Sbjct: 1169 YGEDDDDLLYGDAGNDTIDGGIDEDTIFGGTGNDSLTGGAGADQMSGGDDRDTFVVASAA 1228
Query: 323 NAII-VYDANEHKQDF 337
V D NE D+
Sbjct: 1229 AGAGDVIDGNEGGDDY 1244
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG G++ + G D++D + G N +DL+T + S
Sbjct: 233 LYG----GAGDDTFVGGAGNDTFNG------GTGLDVIDYSKSGAAVN-VDLSTGALS-- 279
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIG---------NSANNVFFESSGNDVFDGSSGL 304
GG +IA I+ V+GS ND ++G ++ NVF G+D G
Sbjct: 280 GGDAAGDSIASG--IDGVIGSEFNDSLVGFDHQGTSASDTYTNVFHGMDGDDTIRGQGSD 337
Query: 305 DTFFYYAPSYLYKIYRFENAI 325
D+ + A + + I
Sbjct: 338 DSLYGGADDDSIEGGAGNDYI 358
Score = 44.7 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 22/175 (12%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
DS +D D + G + I ++ S I + N I ++V G+D+VIG
Sbjct: 1500 DSDPNDDRDKVIAGTGNDTIRTGDDADS-IDAGQGNDVIDAGDDADTVAAGIGDDLVIGG 1558
Query: 284 SANNVFFESSGNDVFDGS--------------------SGLDTFFYYAPSYLYKIYRFEN 323
++ GND +G DT + + ++
Sbjct: 1559 EGSDSISGGDGNDTIYADNGPGTTSPTEVTDDTDPVPQNGRDTVRGGEGNDVIYGGDDDD 1618
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + N+ D D + + + + L+ S + L G D
Sbjct: 1619 LLSGDNGNDWI-DGGIDEDTITGGEGNDTLLGGAGDDSLDGGNSSDSLDGGAGND 1672
Score = 44.3 bits (103), Expect = 0.073, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 14/205 (6%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------- 239
DIV V+ Y A G+L N Y +E Q S T +D + G
Sbjct: 484 DIVTVRA-YDAN-GNLLNVTYTLEGGQTVSNGTITGHDVDNGGSVSPASATGSVLVHIDG 541
Query: 240 ---KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ ID N + ++T IE G+D + G ++ GND
Sbjct: 542 VVARIEIDYNNGGPTDQAITVTDLTCTTVPAIEGDEA--GDDTLSGGEGDDTILGQGGND 599
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
V G +G D + + +++ ++ R ++ +DS
Sbjct: 600 VITGGAGHDRISAGDDRDVIHGGAGDTVDGGAGGDDYDTLDITGQGDWRVVNRTVDSNGN 659
Query: 357 KQRSILEYTASYEDLIQVIGQDVFE 381
+E+ + ++ + E
Sbjct: 660 GYNGTVEFLDADGNVTGALNFTEIE 684
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 48/142 (33%), Gaps = 27/142 (19%)
Query: 220 QTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ G D + D G ++ID ++ + +GG E + TI + V G
Sbjct: 1065 DTVLGGAGHDTILTGDDADSIEGGSGNDWIDAGVDADTVLGG-EGDDTITSGEGSDVVDG 1123
Query: 274 SSGNDVVIG--------------------NSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+GND++ G N+ + GNDV G D + A +
Sbjct: 1124 GAGNDIIYGGLGPTVPDIINIPDATDLVQNNGMDTIHGGEGNDVIYGEDDDDLLYGDAGN 1183
Query: 314 YLYKIYRFENAIIVYDANEHKQ 335
E+ I N+
Sbjct: 1184 DTIDGGIDEDTIFGGTGNDSLT 1205
>gi|294013472|ref|YP_003546932.1| putative Ca2+-binding hemolysin [Sphingobium japonicum UT26S]
gi|292676802|dbj|BAI98320.1| putative Ca2+-binding hemolysin [Sphingobium japonicum UT26S]
Length = 1245
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 6/144 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D+L + LN ++ + + G + + T + + G SGND + G
Sbjct: 236 GSGNDILHG-DDADTNSNDTLNGDAGNDQLYGGAGSDELYGGTGDDLLDGGSGNDYMHGG 294
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV----YDANEHKQDFLS 339
+ N+ +GNDV DGS+ +DT + Y + V + +
Sbjct: 295 AGNDTILAGAGNDVIDGSADVDTLVFSGNRMDYVFTLQADGSYVAVDQRAGSPEGSKTIR 354
Query: 340 DVERLRFADQCIDSVNVKQRSILE 363
+VE +FAD S + ++
Sbjct: 355 NVEYFQFADMTTPSTALNAPPVIT 378
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 9/163 (5%)
Query: 226 GGDDLL---DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
GG+D++ + DL + TI T + + G G+D + G
Sbjct: 158 GGNDIIFGWRGSDTIAGGAGDDLLYGDDLGFNNISGDDTIDGGTGNDILYGGRGSDRMTG 217
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+++ + +G D G SG D +A D L
Sbjct: 218 GDDDDILYGQAGGDNMSGGSGNDILHGDDADTNSNDTLNGDAGNDQLYGGAGSDELYG-- 275
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ A + ++ G DV +
Sbjct: 276 ----GTGDDLLDGGSGNDYMHGGAGNDTILAGAGNDVIDGSAD 314
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 58/162 (35%), Gaps = 3/162 (1%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G+D + T+ G N ++ G + + +S+ G +GND++ G
Sbjct: 1044 DGIGND-IANTMTGNSGNNGLWGGLGNDTLLGNGGDDRLYGEDGQDSLDGGAGNDLLDGG 1102
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+A + +G+D+ G +G DT A + ++ R + A+ + +E
Sbjct: 1103 AAGDTLKGGAGSDMLIGGAGKDTLTGGAEADVFIFNR--GDTTLNTASYDRITDFKAIEG 1160
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
R ++ A+ + + + H
Sbjct: 1161 DRIDLDFLNGSLPAADYAERTIATNNFADALAAANTTAGVNH 1202
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 7/145 (4%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E+ +I G N TI+ T + + ++ ND + + N+V +G D DG +G D+
Sbjct: 798 AENGKTITGSSGNNTISPTTAVLAYQTTALNDTIYALAGNDVIDGGAGADYMDGGAGNDS 857
Query: 307 FFY------YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-R 359
F+ ++ ++VE+L + +
Sbjct: 858 FYVDTWSDDGFAGNDDQVIELAGGGSDLVYASVSYRLAANVEKLTLTGAAAINGMGNELT 917
Query: 360 SILEYTASYEDLIQVIGQDVFESMK 384
+ + + L +G D+ M
Sbjct: 918 NTITGNDAANMLSGGLGADILYGMG 942
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 6/99 (6%)
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N I N + GG ++ +++ G ND + G +++ G+D DG
Sbjct: 918 NTITGNDAANMLSGGLGADILYGMG-GADALDGGDDNDTLFGGDGDDMLVGGLGDDYLDG 976
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+G D+ + Y + + + D N D +
Sbjct: 977 GAGADSMTGGLGNDSYIVDSWSD-----DGNSANDDLIV 1010
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 58/190 (30%), Gaps = 30/190 (15%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTI---YDSGGDDLLDLTLIGGVKNYIDLNTESW 250
IYG+ Y V I + GDD++DLT G
Sbjct: 80 IYGSNLSDA--IFYNNGVISGGFGSFDNIEQFWLGDGDDIIDLTAHGA------------ 125
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ A+ +++ GND+VIG + + GND+ G G DT
Sbjct: 126 -------GGIDYAKDVLVQ---AGLGNDIVIGGAGKDNLQGDGGNDIIFGWRGSDTIAGG 175
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A L I + + D + + L IL A ++
Sbjct: 176 AGDDLLYGDDLGFNNI---SGDDTIDGGTGNDILYGGRGSDRMTGGDDDDILYGQAGGDN 232
Query: 371 LIQVIGQDVF 380
+ G D+
Sbjct: 233 MSGGSGNDIL 242
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 44/141 (31%), Gaps = 4/141 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL---IGGVKNYIDLNTESWSS 252
GA S + + + + + + GG DL+ ++ + + L + +
Sbjct: 852 GAGNDSFYVDTWSDDGFAGNDDQVIEL-AGGGSDLVYASVSYRLAANVEKLTLTGAAAIN 910
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G E TI + + G G D++ G + ND G G D
Sbjct: 911 GMGNELTNTITGNDAANMLSGGLGADILYGMGGADALDGGDDNDTLFGGDGDDMLVGGLG 970
Query: 313 SYLYKIYRFENAIIVYDANEH 333
+++ N+
Sbjct: 971 DDYLDGGAGADSMTGGLGNDS 991
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 64/243 (26%), Gaps = 58/243 (23%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GS GNN + + + TIY G+D++D G +Y+D + S
Sbjct: 805 TGSSGNNTISPTTAVLAYQTTALNDTIYALAGNDVIDG---GAGADYMDGGAGNDSFYVD 861
Query: 256 YEKNMTIAQHT--VIESVVGSS-----------------------------GN---DVVI 281
+ A + VIE G S GN + +
Sbjct: 862 TWSDDGFAGNDDQVIELAGGGSDLVYASVSYRLAANVEKLTLTGAAAINGMGNELTNTIT 921
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN A N+ G D+ G G D + F D+L
Sbjct: 922 GNDAANMLSGGLGADILYGMGGADALDGGDDNDTL----FGGDGDDMLVGGLGDDYL--- 974
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
S+ + ++ D + EG D S
Sbjct: 975 -----------DGGAGADSMTGGLGNDSYIVDSWSDDGNSANDDLIVELAGEGTDQVSAS 1023
Query: 402 YLY 404
Y
Sbjct: 1024 VSY 1026
>gi|293408637|ref|ZP_06652476.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471815|gb|EFF14298.1| conserved hypothetical protein [Escherichia coli B354]
Length = 6925
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 6701 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTTAQATG 6754
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 6755 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 6814
Query: 319 YRFENAII 326
+ ++
Sbjct: 6815 GGNGSDVV 6822
>gi|209966854|ref|YP_002299769.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Rhodospirillum centenum SW]
gi|209960320|gb|ACJ00957.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Rhodospirillum centenum SW]
Length = 488
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+ G N T+ ++++G G+D + G +++ +GND+ DG +G DT
Sbjct: 246 SLTGGAGNDTLEGGAGNDTLLGGDGDDSLSGGDGDDLLIGGAGNDMLDGGAGNDTL 301
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + +S+ G +GND + G + N+ G+D G G D A + +
Sbjct: 235 GLHLTGGDGDDSLTGGAGNDTLEGGAGNDTLLGGDGDDSLSGGDGDDLLIGGAGNDMLDG 294
Query: 319 YRFENAII 326
+ ++
Sbjct: 295 GAGNDTLL 302
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 2/116 (1%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G ++ +GND +G +G DT + +++ A D +
Sbjct: 238 LTGGDGDDSLTGGAGNDTLEGGAGNDTLLGGDGDDSLSGGD-GDDLLIGGAGNDMLDGGA 296
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEG 394
+ L +L + LI G + F L+EG
Sbjct: 297 GNDTLLGGPGDDTLDGGGGFDLLLAGDGDDTLIVTEGTVAAGGRGADRFVFRLAEG 352
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 22/137 (16%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
++ G+D L+ GG N L + S+ G + + + + + G +GND
Sbjct: 245 DSLTGGAGNDTLE----GGAGNDTLLGGDGDDSLSGGDGDDLLIGGAGNDMLDGGAGNDT 300
Query: 280 VI---------GNSANNVFFESSGNDVFD--------GSSGLDTFFYY-APSYLYKIYRF 321
++ G ++ G+D G G D F + A +
Sbjct: 301 LLGGPGDDTLDGGGGFDLLLAGDGDDTLIVTEGTVAAGGRGADRFVFRLAEGWNAAPDAP 360
Query: 322 ENAIIVYDANEHKQDFL 338
A ++ D + D L
Sbjct: 361 HPAAVILDFDRDDGDRL 377
>gi|156390250|ref|XP_001635184.1| predicted protein [Nematostella vectensis]
gi|156222275|gb|EDO43121.1| predicted protein [Nematostella vectensis]
Length = 450
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 48/164 (29%), Gaps = 47/164 (28%)
Query: 58 ALGEWSKVVDLTFEETSIH---SDIKFISSNNGYVC------------------TPRYDS 96
A +W+ V L F +DI G P ++
Sbjct: 100 AFSKWAAVTSLVFVRVPPTSRDADITIRFVKAGDHGDEKPFRKGITEQLVGHTFPPWNNT 159
Query: 97 RYFMEINFDKADVWR-YGIGKGTILSH-NALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
+I+F+ + G + A+HEIGH+LGL H G
Sbjct: 160 GRSGDIHFNDDKYFSLPGYARAAYDFLWIAMHEIGHSLGLAHTGD--------------- 204
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
SVM + + DI +Q +YG P
Sbjct: 205 ----PFSVM-----YTTYTAYFYNRKRDLSADDIRGIQALYGPP 239
>gi|45738071|gb|AAS75833.1| PsmE [Pseudomonas syringae]
gi|320325481|gb|EFW81544.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. glycinea str. B076]
Length = 1610
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 9/171 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G G D + +
Sbjct: 1452 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGVGDDVLIGGSGADTLIGGTG 1509
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + ++NE L D+ F D ++ T +++ +
Sbjct: 1510 ADRYVFNNSNETGLGGLRDI-INGFKAAEGDKLDFTGFDARPLTDAHDAFV 1559
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMIFGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ +V D
Sbjct: 447 YRTATTSATDLVTD 460
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G G+D + G++ ++ +G D G G DTF Y A + Y+ Y
Sbjct: 810 DTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSALTDSYRDYDAGG----L 865
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A + DF +++ + + + L
Sbjct: 866 TATDTIYDFTPGQDKIDVSALGFLGLGNGEDHTLY 900
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N+T T E+ G+ G+D ++G ++ +G D+ +G +G D + +
Sbjct: 786 VGNVTPGVLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGA 845
Query: 314 YLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ ++ YDA D + D
Sbjct: 846 DTFVYSALTDSYRDYDAGGLTATDTIYDF 874
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L I+S ++++ AS L G D+
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINSTGNALKNVITGNASNNVLDGAAGADLLTG 1340
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GNDV+ GN+ + +G D+ +G + D A + L+ ++ Y
Sbjct: 541 DTLTGTDGNDVMNGNAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY 600
Query: 329 DANEHKQ-DFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYED 370
A+ KQ D ++D +R+ + + + + + Y + D
Sbjct: 601 TASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 1223 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTE 1275
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + S+GN +V+ GN++NNV ++G
Sbjct: 1276 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINSTGNALKNVITGNASNNVLDGAAGA 1335
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 1336 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 1395
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 1396 NATGNTLDNLIYAGAGDNVMDGRDGN 1421
>gi|270015241|gb|EFA11689.1| hypothetical protein TcasGA2_TC016133 [Tribolium castaneum]
Length = 1330
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 69/206 (33%), Gaps = 70/206 (33%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-----------TSIHSDIKFIS 83
L + + +E+A+ A +W V +L FE S+ DI
Sbjct: 458 WNKTNLKWYFSLATNEMKELAQKAFDQWESVSNLKFEYWHSQPSAVGEYNSVKPDILISF 517
Query: 84 SN-----------NGYVCTPRYDS-------RYFME------INFDKADVWRYGIGKGTI 119
SN +C+ +D +F I+FDK++ W +G T
Sbjct: 518 SNTLFQHNHNSRCQKGICSSSFDGKGNVLAHGFFPNNDECLGIHFDKSENWYFGESSNTP 577
Query: 120 LSHN-----ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM-SYFMPQDSMM 173
LHEIGH LG+ H + N S+M +Y+ +
Sbjct: 578 DDQTNFYTVLLHEIGHTLGIEHSANNN-------------------SIMYAYYKGDIDKL 618
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPK 199
D+ A+Q +YG P+
Sbjct: 619 TR----------DDMWAIQYLYGRPE 634
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 70/206 (33%), Gaps = 70/206 (33%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-----------TSIHSDIKFIS 83
L + + +E+A+ A +W V +L FE S+ DI
Sbjct: 911 WNKTNLKWYFSLATNEMKELAQKAFDQWESVSNLKFEYWHSQPSAVGEYNSVKPDILISF 970
Query: 84 SN-----------NGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTI 119
SN +C+ +D + + I+FDK++ W +G + T
Sbjct: 971 SNTLFQHNHNSRCQKGICSSSFDGKGNVLAHGIFPNNDECLGIHFDKSENWYFGESRNTP 1030
Query: 120 LSHN-----ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM-SYFMPQDSMM 173
LHEIGH LG+ H + N S+M +Y+ +
Sbjct: 1031 DDQTNFYTVLLHEIGHTLGIEHSANNN-------------------SIMYAYYKGDIDKL 1071
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPK 199
D+ A+Q +YG P+
Sbjct: 1072 TR----------DDMWAIQYLYGRPE 1087
>gi|190895181|ref|YP_001985474.1| hypothetical protein RHECIAT_PC0000854 [Rhizobium etli CIAT 652]
gi|190700842|gb|ACE94924.1| hypothetical protein RHECIAT_PC0000854 [Rhizobium etli CIAT 652]
Length = 349
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 35/86 (40%)
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
++L S + + +++VG+ ND + G N++ +G+D DG
Sbjct: 2 ATVNLLPGQDSDFSDQAGPVNVYGTDGNDNIVGTDANDNLRGGIGNDILVGGAGDDFLDG 61
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAII 326
G D + + Y + ++ ++
Sbjct: 62 GEGNDRMYGGVGNDTYVVQSAQDVVV 87
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 87/245 (35%), Gaps = 21/245 (8%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++YG +GN+ Y V Q + + G D + N +L +
Sbjct: 67 RMYG----GVGNDTY---VVQSAQDVVVELAGEGIDHVKAYISYTLRPNVENLTLMGEDN 119
Query: 253 IGGYEK--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N TI + ++ G G+D ++G + N++ +GND DG +G+D Y
Sbjct: 120 LNGSGNELNNTIKGNIGNNTLFGGDGDDSLLGLAGNDIIRGGNGNDFMDGGTGVDLVSYK 179
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVK------QRSI 361
+ N D +D L + E L FAD+ +
Sbjct: 180 DALNGVTVDLSINTKSQ-DTIGAGRDTLKNFENLEGSIFADKLSGDAGDNKIAGLDGNDV 238
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDR 419
+ A +D+ G D G+ RD T DS + + D+ +F S
Sbjct: 239 IRGGAGNDDITGGAGADTIVFEAAGATNGVDRIRDFQSTIDSLQFSKADYDVNALFTSSD 298
Query: 420 GAAAR 424
+ A
Sbjct: 299 KSEAE 303
>gi|297482617|ref|XP_002692980.1| PREDICTED: matrix metalloproteinase 8 preproprotein-like [Bos
taurus]
gi|296480364|gb|DAA22479.1| matrix metalloproteinase 8 preproprotein-like [Bos taurus]
Length = 494
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 63/202 (31%), Gaps = 52/202 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T + D+ + + A WSKV LTF T +DI+
Sbjct: 111 WEKTKLTYRIVNYTPNLTEMDV-------EAIIEEAFKVWSKVSPLTFNRTLDEEADIQI 163
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+N P +++FD + W + L A HE
Sbjct: 164 SFAQRDHGDNSPFDGPDGILAHAFQPGPGIGGDVHFDAEETWT-KTSENYNLFPVAAHEF 222
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YP Y + SY + QD D
Sbjct: 223 GHSLGLAHSSDPGALMYPNYAFIDPS----------SYSLHQD----------------D 256
Query: 188 IVAVQKIYGA---PKGSLGNNI 206
I +Q IYG P G
Sbjct: 257 INGIQAIYGPSSNPVQPTGPTT 278
>gi|260778542|ref|ZP_05887434.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Vibrio coralliilyticus ATCC BAA-450]
gi|260604706|gb|EEX31001.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Vibrio coralliilyticus ATCC BAA-450]
Length = 5696
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G G+D++ G ++ +GND+ G +G DT S + E+ + +
Sbjct: 5536 DTLSGGVGDDILFGQGGDDTLDGGAGNDILLGGAGDDTLIGGLGSDILSGGDGEDEFVWH 5595
Query: 329 DAN-EHKQDFLSDVER 343
D + + D ++D
Sbjct: 5596 DGDLDGGTDVITDFHV 5611
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G +GND+++G + ++ G+D+ G G D F ++
Sbjct: 5537 TLSGGVGDDILFGQGGDDTLDGGAGNDILLGGAGDDTLIGGLGSDILSGGDGEDEFVWHD 5596
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ V +D + D+ L D+ ++ + +
Sbjct: 5597 G-------DLDGGTDVITDFHVSEDKI-DISDLLGQDETMEELLSDVSA 5637
>gi|26354468|dbj|BAC40862.1| unnamed protein product [Mus musculus]
Length = 465
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 62/209 (29%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
D LL W++ + Y+ T ++ + A WS
Sbjct: 93 VPDSGDFLLTPGSPKWTHTNLTYRIINHTPQLSRAEV-------KTAIEKAFHVWSVASP 145
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF E +DI +N P + +FD + W
Sbjct: 146 LTFTEILQGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWT-Q 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
K L A HE GH+LGL H YP Y Y S +Y +PQD
Sbjct: 205 DSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSLPQD-- 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG
Sbjct: 253 --------------DINGIQTIYGPSDNP 267
>gi|77460468|ref|YP_349975.1| hemolysin-type calcium-binding region [Pseudomonas fluorescens Pf0-1]
gi|77384471|gb|ABA75984.1| Hemolysin-type calcium-binding region protein [Pseudomonas
fluorescens Pf0-1]
Length = 1213
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 78/216 (36%), Gaps = 18/216 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-- 267
+ + ++ GG D L G Y++ ++ ++ AQ V
Sbjct: 913 DTFTGSNALRESFIGGGGADTLIGVGRGDSAWYVNSSSAVQVNLLTGTGVGGDAQGDVLT 972
Query: 268 -IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
I+++VGS+ ND + GN N+ GND+ G G DT + ++ + A+
Sbjct: 973 NIDNLVGSAFNDTLTGNGYANMLEGGDGNDILYGGDGSDTLYGHS-------FTNTGALA 1025
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
V A +++ D + V+ + Y + D I VI +
Sbjct: 1026 VPFATDNQADIIYGGN-----GDDYIIGYVRDVGSVFYGEAGNDNITVISGVADGGDGND 1080
Query: 387 YEFGLSEGRDI---TFDSYLYLGSYDDLRNVFGSDR 419
GL G ++ LYL + D GSD
Sbjct: 1081 TLMGLGHGYELRGGAGADKLYLSASGDAYGGEGSDS 1116
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G T+ + + + G +GND + G N++ +G D+ +G +G+DT Y
Sbjct: 4 INGTSGTDTLVGTSSADELFGFAGNDSLSGGEGNDLLDGGAGADILNGGNGIDTASYANS 63
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + DA D L+ +E + + + L A
Sbjct: 64 TAGVTVNLATGTGVGADAQG---DTLTSIEAVIGSSFNDVLTAQTSGNTLNGGAG 115
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 9/168 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ GDD+ + G N I+ + N ++A +
Sbjct: 96 SFNDVLTAQTSGNTLNGGAGDDIYYINGSGV--NVIEAAGGGDDEVRTILLNHSLAANVE 153
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+G+ GN+ +NV GND G +G D F A + + +
Sbjct: 154 -RLTYVGTGSFTGYGNALDNVITGGVGNDYLFGGAGADRFIGGAGNDTVSYGDSGVGVTI 212
Query: 328 -----YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ D +E L+ + ++ + Y + D
Sbjct: 213 NTKTGVNTGIAAGDTYVGIEALQGSGSNDTFISGEAAD-QFYGSGGTD 259
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 9/168 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ GDD+ + G N I+ + N T+A +
Sbjct: 300 SFNDVLTAQTSGNTLNGGAGDDIYYINGSGV--NVIEAAGGGDDEVRTIMLNQTLAANVE 357
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+G+ GN+ +NV GND G +G D F A + + +
Sbjct: 358 -RLTYVGTGSFTGYGNALDNVITGGVGNDYLFGGAGADRFIGGAGNDTVSYGDSGVGVAI 416
Query: 328 -----YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ D +E L+ + ++ + Y + D
Sbjct: 417 NTKTGVNTGIAAGDTYVGIEALQGSGSNDTFISGEAAD-QFYGSGGTD 463
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 9/168 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ GDD+ + G N I+ + N T+A +
Sbjct: 504 SFNDVLTAQTSGNILNGGAGDDIYYINGTGV--NVIEAAGGGDDEVRTIMLNQTLAANVE 561
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+G+ GN+ +NV GND G +G D F A + + + +
Sbjct: 562 -RLTYVGTGSFTGYGNALDNVITGGVGNDYLFGGAGADQFIGGAGNDIVSYGDSGVGVTI 620
Query: 328 -----YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ D +E L+ + ++ + Y + D
Sbjct: 621 NTKTGVNTGIAAGDTYVGIEALQGSGSNDTFISGEAAD-QFYGSGGTD 667
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 49/179 (27%), Gaps = 8/179 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ GDD+ + G N I+ + N T+A +
Sbjct: 708 SFNDVLTAQTSGNILNGGAGDDIYYINGTGV--NVIEAAGGGDDEVRTIMLNQTLAANVE 765
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+G+ GN+++N+ G D G +G D FF + +
Sbjct: 766 -RLTYVGTGSFTGYGNASDNIITGGVGADTLFGGAGADQFFGGDGFDTVSYGDSAAGVTI 824
Query: 328 -----YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D + +E++R + V + + L
Sbjct: 825 NTKTGVNTGIAAGDTYNGIEQIRGSSYGDIFVGSAGVDRFDGGDGNDILSFAGENSGVT 883
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 16/187 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
S + ++ S + G D+L+ +Y + ++
Sbjct: 16 TSSADELFGFAGNDSLSGGEGNDLLDGGAGADILNGGNGIDTASYANSTAGVTVNLATGT 75
Query: 258 KNMTIAQH---TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
AQ T IE+V+GSS NDV+ ++ N +G+D+ +Y S
Sbjct: 76 GVGADAQGDTLTSIEAVIGSSFNDVLTAQTSGNTLNGGAGDDI----------YYINGSG 125
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQ 373
+ I ++VERL + +++ + L
Sbjct: 126 VNVIEAAGGGDDEVRTILLNHSLAANVERLTYVGTGSFTGYGNALDNVITGGVGNDYLFG 185
Query: 374 VIGQDVF 380
G D F
Sbjct: 186 GAGADRF 192
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 55/195 (28%), Gaps = 25/195 (12%)
Query: 196 GAPKGSLGNNIY---------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
G G + Y Y SGG D +D + +
Sbjct: 217 GVNTGIAAGDTYVGIEALQGSGSNDTFISGEAADQFYGSGGTDTIDYSGSSSGVTVSLVG 276
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + E+V+GSS NDV+ ++ N +G+D+
Sbjct: 277 GVAGVGGDAQGDKLW-----EFETVIGSSFNDVLTAQTSGNTLNGGAGDDI--------- 322
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYT 365
+Y S + I Q ++VERL + +++
Sbjct: 323 -YYINGSGVNVIEAAGGGDDEVRTIMLNQTLAANVERLTYVGTGSFTGYGNALDNVITGG 381
Query: 366 ASYEDLIQVIGQDVF 380
+ L G D F
Sbjct: 382 VGNDYLFGGAGADRF 396
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 25/195 (12%)
Query: 196 GAPKGSLGNNIY---------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
G G + Y Y SGG D +D + +
Sbjct: 625 GVNTGIAAGDTYVGIEALQGSGSNDTFISGEAADQFYGSGGTDTIDYSGSSSGVTVSLVG 684
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + E+V+GSS NDV+ ++ N+ +G+D+
Sbjct: 685 GVAGVGGDAQGDKLW-----EFETVIGSSFNDVLTAQTSGNILNGGAGDDI--------- 730
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYT 365
+Y + + I Q ++VERL + +I+
Sbjct: 731 -YYINGTGVNVIEAAGGGDDEVRTIMLNQTLAANVERLTYVGTGSFTGYGNASDNIITGG 789
Query: 366 ASYEDLIQVIGQDVF 380
+ L G D F
Sbjct: 790 VGADTLFGGAGADQF 804
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 25/202 (12%)
Query: 189 VAVQKIYGAPKGSLGNNIY---------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
VA+ G G + Y Y SGG D +D +
Sbjct: 414 VAINTKTGVNTGIAAGDTYVGIEALQGSGSNDTFISGEAADQFYGSGGTDTIDYSGSSSG 473
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + + E+V+GSS NDV+ ++ N+ +G+D+
Sbjct: 474 VTVSLVGGVAGVGGDAQGDKLW-----EFETVIGSSFNDVLTAQTSGNILNGGAGDDI-- 526
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQ 358
+Y + + I Q ++VERL +
Sbjct: 527 --------YYINGTGVNVIEAAGGGDDEVRTIMLNQTLAANVERLTYVGTGSFTGYGNAL 578
Query: 359 RSILEYTASYEDLIQVIGQDVF 380
+++ + L G D F
Sbjct: 579 DNVITGGVGNDYLFGGAGADQF 600
Score = 38.6 bits (88), Expect = 4.0, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 45/155 (29%), Gaps = 19/155 (12%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG + G + V IY GDD + I + S
Sbjct: 1013 LYGHSFTNTG----ALAVPFATDNQADIIYGGNGDDYI-----------IGYVRDVGSVF 1057
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N I + + G GND ++G +G D S+ D Y
Sbjct: 1058 YGEAGNDNITVISGV--ADGGDGNDTLMGLGHGYELRGGAGADKLYLSASGDA--YGGEG 1113
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++D D ++ F D
Sbjct: 1114 SDSYFVSSKTMVAIFDEGTTGIDIVTLKNIQSFND 1148
>gi|320120425|gb|ADW16141.1| hypothetical protein HMPREF0389_01695 [Filifactor alocis ATCC 35896]
Length = 1989
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I Y + I + + GN++V G N+ SGND+ +G G D
Sbjct: 1314 NTINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGSGNDILEGGKGNDHLNGG 1373
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
Y R + + D + V++L F D
Sbjct: 1374 YGGDTYVFSRGDGQDTIEDYSGG----YEGVDKLIFKD 1407
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 37/95 (38%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I Y + I + + GN++V G N+ GND+ +G G D
Sbjct: 1804 NTINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGRGNDILEGGKGNDYLNGG 1863
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
Y ++ + ++D N + ++ + L
Sbjct: 1864 YGGDTYIFHKGDGNDTIFDENGSQDKVITASDMLH 1898
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I Y + I + + GN++V G N+ GND G G D Y
Sbjct: 1476 NTINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGY 1535
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ Y R + IV + N + V+++ F D
Sbjct: 1536 YGADTYIFSRGDGQDIVDENNSDNSHSV--VDKIVFTD 1571
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I Y + I + + GN++V G N+ GND G G D Y
Sbjct: 1640 NTINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGY 1699
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ Y R + IV + N + V+++ F D
Sbjct: 1700 YGADTYIFSRGDGQDIVDENNSDNSHSV--VDKIVFTD 1735
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 25/144 (17%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFI---QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
A + + G++ + + + T+Y G D +
Sbjct: 863 ANQITTGDDFIETTNDNDEIDLLSGDDTVYTKSGKDTI---------------------- 900
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G TI + + G G+D + G + + +G+D +G G DT+ ++
Sbjct: 901 HGNAGADTIYAGEGDDILYGDEGSDKLYGENGEDTLIGGTGDDYLNGGYGADTYLFHKGD 960
Query: 314 YLYKIYRFENAIIVYDANEHKQDF 337
+ I ++ D + +D
Sbjct: 961 GIDTIEEYDYNTQNIDKIQLDKDI 984
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VGS +D + G + G+D+ DG G DT++Y I + +
Sbjct: 1059 DILVGSQESDTIHGYDGQDQITGGKGDDILDGGYGNDTYYYNKGDGSDIITDYSGNNTLI 1118
Query: 329 DANEHKQDFLSDVER 343
+D +
Sbjct: 1119 LGEGISKDKVVFTRV 1133
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+D + G + ++ GND +G G DT+ + I + D
Sbjct: 1187 DDYLEGTNGADILEGGKGNDHLNGGYGGDTYVFSRGDGQDTIEDYSGGYEGVD 1239
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 7/116 (6%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y K +TI +++ + N G S N+ + GND+ G +G DT+F+
Sbjct: 728 YTKGVTIHAGDGN-NIIQGTFN----GPSGNDYIYAGKGNDMIYGGTGSDTYFFEKGDGN 782
Query: 316 YKIYRFENA--IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I NA + + + + RL D I ++
Sbjct: 783 DTIKESINAKDTNIVVFGKGIKKENLQIRRLNHHDVKITIKGTDDSLTIQGQIQNN 838
Score = 45.1 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 29/169 (17%)
Query: 195 YGAPKG--SLGNNI-----YKIEVQQ-------KDSPFIQTIYDSGGDDLLDLTLIGGVK 240
YGA G+ I Y Q KD I + G+D L++T G
Sbjct: 949 YGADTYLFHKGDGIDTIEEYDYNTQNIDKIQLDKDIKKEDIILNRKGND-LEITFKAGND 1007
Query: 241 NYI--DLNTESWSSIGG--YEKNMTIAQ----HTVIESVV------GSSGNDVVIGNSAN 286
I + + S+I Y N IA T ++ + G+ +D+++G+ +
Sbjct: 1008 KIIVKNQFANANSTIEQIVYGNNQIIAFQEMLDTTNQNSIKEHLLQGAYTDDILVGSQES 1067
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ G D G G D + Y + + + I+ D + +
Sbjct: 1068 DTIHGYDGQDQITGGKGDDILDGGYGNDTYYYNKGDGSDIITDYSGNNT 1116
Score = 44.3 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 25/131 (19%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG K + N Y + + I+ G+D + G N I +
Sbjct: 1798 YGDEKDNTINT-YSTDDK---------IFAGAGNDRI----HAGDGNNI---------VY 1834
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAP 312
G E N I + + G GND + G + F + GND +G A
Sbjct: 1835 GGEGNDEIRSGRGNDILEGGKGNDYLNGGYGGDTYIFHKGDGNDTIFDENGSQDKVITAS 1894
Query: 313 SYLYKIYRFEN 323
L+ I+ +
Sbjct: 1895 DMLHTIFEKDG 1905
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++ ++G D+ +G G D Y R + + D + V++L
Sbjct: 1187 DDYLEGTNGADILEGGKGNDHLNGGYGGDTYVFSRGDGQDTIEDYSGG----YEGVDKLI 1242
Query: 346 FAD 348
F D
Sbjct: 1243 FKD 1245
>gi|297689508|ref|XP_002822184.1| PREDICTED: olfactory receptor 51L1-like [Pongo abelii]
Length = 574
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 55/191 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKF 81
W+ + + Y+ + ++ A+ WS V L F++ +DIK
Sbjct: 99 WNKHTLTYRIINYPHDMKPSTV-------KDSIYNAVSIWSNVTPLIFQQVQNEDADIKI 151
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ P +S ++FDK + W G L A HEI
Sbjct: 152 SFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWS-ASDTGYNLFLVATHEI 210
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMV- 185
GH+LGL H G+ +S+M +Y+ + T +
Sbjct: 211 GHSLGLQHSGN-------------------RSSIMYPTYW----------YHDPRTFQLS 241
Query: 186 -SDIVAVQKIY 195
DI +Q +Y
Sbjct: 242 ADDIQRIQHLY 252
>gi|260575932|ref|ZP_05843927.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259021858|gb|EEW25159.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 878
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 3/152 (1%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L+ TL G N + S+ G + N T+A T + + G +G D + G N+
Sbjct: 300 LNDTLTGDAANNLLSGGAGNDSLSGGDSNDTLAGGTGADLLSGGTGTDSLYGGDDNDTLL 359
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D+ DG +G+DT Y A S + A DA D LS +E L +
Sbjct: 360 GGTGADLLDGGAGIDTADYTASSIAVNVNLGTGATSGGDAAG---DTLSGIENLIGSAFN 416
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + LI G D +
Sbjct: 417 DSLTGDAGANSISGGTGNDSLIGGGGADTLDG 448
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 11/148 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYE 257
+ I Q + Y GG+D +D GG N L + G
Sbjct: 681 DTIIGFNDQGLVGDVYTNVFYGGGGNDYIDGAGSDDVLYGGDDNDTMLGGAGNDVLSGDA 740
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N +++ T ++ G +GND + G++ +V GND DG + DT L
Sbjct: 741 GNDSLSGGTGNDTASGGTGNDSISGDAGADVLSGGDGNDSLDGGADADTLSGDLGDDLLS 800
Query: 318 IYRFENAIIVYDANE-----HKQDFLSD 340
++ ++ D ++ D LS
Sbjct: 801 GGTGDDVLLGGDGSDTLYGGDGNDTLSG 828
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 60/194 (30%), Gaps = 14/194 (7%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ +++Y + + G D D T N ++L T + S
Sbjct: 343 GTGTDSLYGGDDNDTLLGGTGADLLDGGAGIDTADYTASSIAVN-VNLGTGATSGGDAAG 401
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++ IE+++GS+ ND + G++ N +GND G G DT +
Sbjct: 402 DTLS-----GIENLIGSAFNDSLTGDAGANSISGGTGNDSLIGGGGADTLDGGTGTDTVD 456
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ D L+ +E L + + L A + L
Sbjct: 457 YALSLAGVNVNLTTGAGSGGDADGDLLTAIENLIGSGLADTLTGNTAANALTGGAGNDLL 516
Query: 372 IQVIGQDVFESMKH 385
G D
Sbjct: 517 SGGSGNDSLYGGDD 530
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 60/171 (35%), Gaps = 12/171 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + N ++ T + + G +GND + G N+ +G+D+ G +G+DT Y A
Sbjct: 30 TLNARDGNDSLLAGTGNDLLYGGTGNDSMYGGDDNDTLEGGTGSDILSGDAGIDTASYAA 89
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + DA D LS +E L +D ++L + L
Sbjct: 90 STAAVSVNLTTGTGSGGDAAG---DTLSGIENLLGSDYNDTLTGDAGANVLSGGLGNDSL 146
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
G D + G D S +L GS AA
Sbjct: 147 TGGGGADTLDGGT---------GTDTADYSLSLAAVNVNLTTGTGSGGDAA 188
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 12/181 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G D +D L ++L T + S + T IE
Sbjct: 434 NDSLIGGGGADTLDGGTGTDTVDYAL-SLAGVNVNLTTGAGSGGDADGDLL-----TAIE 487
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFEN 323
+++GS D + GN+A N +GND+ G SG D+ + + +
Sbjct: 488 NLIGSGLADTLTGNTAANALTGGAGNDLLSGGSGNDSLYGGDDNDTLLGGSGSDVLSGGA 547
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I D + + ++ L TA + L G ++
Sbjct: 548 GIDTADYTGSTSAVNVSLTSGSGSGGDAAGDSLTGIENLTGTALNDTLTGSAGANILAGG 607
Query: 384 K 384
Sbjct: 608 A 608
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 11/138 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D D T N S +S G + T IE++ GS+ ND + G++
Sbjct: 255 GAGIDTADYTGSTAAVNV------SLASGTGTGGDAAGDTLTGIENLTGSALNDTLTGDA 308
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLS 339
ANN+ +GND G DT + L +++ D N+ D L
Sbjct: 309 ANNLLSGGAGNDSLSGGDSNDTLAGGTGADLLSGGTGTDSLYGGDDNDTLLGGTGADLLD 368
Query: 340 DVERLRFADQCIDSVNVK 357
+ AD S+ V
Sbjct: 369 GGAGIDTADYTASSIAVN 386
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 8/116 (6%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+++Y + + G D D T N S +S G +
Sbjct: 523 DSLYGGDDNDTLLGGSGSDVLSGGAGIDTADYTGSTSAVNV------SLTSGSGSGGDAA 576
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
T IE++ G++ ND + G++ N+ +GND G G DT +
Sbjct: 577 GDSLTGIENLTGTALNDTLTGSAGANILAGGAGNDNLSGGDGDDTLVGGTGADTLS 632
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ T GG N + G + N ++ +++ G G+D++ G + ++V
Sbjct: 749 TGNDTASGGTGNDSISGDAGADVLSGGDGNDSLDGGADADTLSGDLGDDLLSGGTGDDVL 808
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYL 315
G+D G G DT A L
Sbjct: 809 LGGDGSDTLYGGDGNDTLSGGAGGDL 834
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 56/187 (29%), Gaps = 18/187 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T+ G D L D G +++N +W+ GG +
Sbjct: 610 NDNLSGGDGDDTLVGGTGADTLSGGQGMDYADYSGSATAVNINLGTWTVTGGDATGDVL- 668
Query: 264 QHTVIESVVGSSGNDVVIG--------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
T I+ + GS+ ND +IG + NVF+ GND DG +G D Y
Sbjct: 669 --TGIDGIFGSAFNDTIIGFNDQGLVGDVYTNVFYGGGGNDYIDG-AGSDDVLYGGDDND 725
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ N ++ DA + + +L + L
Sbjct: 726 TMLGGAGNDVLSGDAGNDSLSGGTGNDTASGGTGNDSISGDAGADVLSGGDGNDSLDGGA 785
Query: 376 GQDVFES 382
D
Sbjct: 786 DADTLSG 792
>gi|260793745|ref|XP_002591871.1| hypothetical protein BRAFLDRAFT_125518 [Branchiostoma floridae]
gi|229277083|gb|EEN47882.1| hypothetical protein BRAFLDRAFT_125518 [Branchiostoma floridae]
Length = 758
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 69/207 (33%), Gaps = 54/207 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEE 72
+RD +N+ + K D L+++ +P ++ AL W++V LTF
Sbjct: 246 VRDVRVANFVLGNKWDHTD---LTYNFKNFSPDLKEGEQKDAIAKALDLWAQVTPLTFTL 302
Query: 73 TS--------------IHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWR----YG 113
+ H D N G + + + +FD+A+V+
Sbjct: 303 VAPDDEADIVIQFLSGDHGDGSPFDGNGGTLGHAFFPGDGIGGDTHFDEAEVFNIVTPGE 362
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ A HE GHALGL H + +M+ F
Sbjct: 363 FTTAVDMMTVAAHEFGHALGLGHSNIQDA-------------------LMAPF------- 396
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKG 200
+ V DI +QK+YG P
Sbjct: 397 -YRYSSELQLHVDDISGIQKLYGVPST 422
>gi|73621151|sp|Q9EV31|LKA13_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762032|gb|AAG40294.1|AF314510_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 723 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 783 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 819
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 768 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 812
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 765 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 824
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 825 LVITNTKQEKVTI--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 872
>gi|311270531|ref|XP_001925199.2| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-17 [Sus
scrofa]
Length = 592
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSI-HSDIKFI 82
P LS+ + +P ++ R +AL WS + L F E + +DI+
Sbjct: 124 APTKWNKRNLSWRVRTFPRDSPLGRDTVRALMHYALKVWSDITPLNFHEVAGSTADIQID 183
Query: 83 SSNNGYVCTPRYDSRYF--------------MEINFDKADVWRY--GIGKGTILSHNALH 126
S + +D + +FD + W + G L A+H
Sbjct: 184 FSTADHNDRYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 243
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 244 EFGHAIGLSH 253
>gi|297537209|ref|YP_003672978.1| Ig family protein [Methylotenera sp. 301]
gi|297256556|gb|ADI28401.1| Ig family protein [Methylotenera sp. 301]
Length = 3249
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
TV + VG+ N+ ++GN+A N G+DV G +G DT + LY + N
Sbjct: 2708 GTVAINAVGNGLNNTMVGNAAANKLEGGDGDDVISGGAGADTMVGGNGNDLYTV-DNVND 2766
Query: 325 IIVYDANEHKQDFLS----------DVERLRFADQCIDSVNVKQRSILEYTASYE 369
I++ D N D++ +VE L I++ + +I+ +S
Sbjct: 2767 IVIEDVNGGDSDWIKTSVTLTSLAANVEILAILGTVINATGNELDNIIFGNSSNN 2821
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 9/186 (4%)
Query: 200 GSLGNNIYKIEVQ-QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY-- 256
+ NN DS Q Y G D L L G + I + S +SI +
Sbjct: 1344 SNAENNTIVFGAGISLDSITTQQSYGQDGKDYLTL-YYGNQGDSITIQNGSNNSIKQFQF 1402
Query: 257 -EKNMTIAQHTVIES---VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N + + +++I + + G++GND +IGN N+ +GND G G DT+
Sbjct: 1403 TDTNNSYSLNSIIANPLTLNGTAGNDTLIGNRNNDTLDGKAGNDTLIGGLGNDTYLINLG 1462
Query: 313 SYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I N + + + + + + K+ +L+Y ++ D
Sbjct: 1463 DGTDTIIESSNGQSNANNTVQFGPSYGAGINLNDVTGTKRIDADGKEYLVLQYGSNPSDQ 1522
Query: 372 IQVIGQ 377
+ ++
Sbjct: 1523 VSILDG 1528
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 66/200 (33%), Gaps = 28/200 (14%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + T+ G+D+ + +G V + + + ++T
Sbjct: 2462 TGNT---ANNTLNGAAGADTMSGGLGNDIYVVDNVGDV-----VTENAGEGTDTVQSSIT 2513
Query: 262 IAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+E+ + +GN +++ GN+ANN GND +G +G DT
Sbjct: 2514 YTLGNALENLTLTGTTAINGTGNALDNLLTGNTANNTLIGGDGNDTLNGGTGADTMSGGL 2573
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV--------ERLRFADQCIDSVNVKQ-RSIL 362
+ +Y + ++ +A E S + E L + ++L
Sbjct: 2574 GNDIY-VVDNVGDVVTENAGEGTDTVQSSITYTLGNALENLTLTGTTAINGTGNALDNVL 2632
Query: 363 EYTASYEDLIQVIGQDVFES 382
+ LI G D
Sbjct: 2633 TGNTANNTLIGGDGNDTLNG 2652
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 87/233 (37%), Gaps = 34/233 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-KNYIDLNTESWSSIGGYEK 258
+ G+ Y + ++ +++D GG + TL+G + I++ + ++IGG +
Sbjct: 1046 SNNGSTSYILHGTTSNAK---SVFDLGGTQISYATLVGDTLQTQINIKAVNATAIGGMQN 1102
Query: 259 NMTIAQH------------------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ +A T + ++G G DV+ G++ N+ +GND+ +G
Sbjct: 1103 DTLVASDGLDTYLSGGRGDDALYGSTGADELIGGQGADVLNGDAGNDNITGGTGNDMLNG 1162
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G DT+ + + +AI + + K
Sbjct: 1163 GLGADTYQFQLGDGNDTLAEQNDAISHIQFGAGITTNDISI---------TYTDPTKPDP 1213
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG--RDITFDSYLYLGSYDDL 411
L +T +Y + V HF + GL+ G D +F + S +DL
Sbjct: 1214 SLGFTINYGTHLDVTTNITTTDSIHFMQ-GLNNGITADFSFADGTTIASIEDL 1265
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 49/132 (37%), Gaps = 9/132 (6%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYI--------DLNTESWSS-IGGYEKNMTIAQHTVI 268
F T + + G+D L+ + G+ N + L+ + G + +
Sbjct: 317 FKDTKFGTSGNDELNGGFLIGLGNDVLFGLGGNDHLDGGLGKDRLYGGAGDDVLDGGWGD 376
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G ND + G N+ +GND +G G D + + Y + ++
Sbjct: 377 DQLYGGKDNDTLNGGDDNDHLEGGAGNDTLNGGEGADYLYGGTGTDTYIHNTGDGNDVIM 436
Query: 329 DANEHKQDFLSD 340
D++ + ++
Sbjct: 437 DSDGDGKILING 448
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 37/84 (44%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+T++ +S++G +D ++G + ++V ++GND+ DG +G D Y
Sbjct: 1574 LTVSGTEGADSLIGGKASDTLLGGAGDDVLTANAGNDLLDGGAGNDMLDGGVGLDTYVFN 1633
Query: 320 RFENAIIVYDANEHKQDFLSDVER 343
+ +V + N L +
Sbjct: 1634 KGTGNDVVLETNVETNRILLGNDI 1657
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 47/149 (31%), Gaps = 14/149 (9%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ ND +IG N++ +G+D G G DT+ + + E V +
Sbjct: 2373 GTTANDTLIGGQGNDLLDGGAGSDTMKGGKGNDTYIVDNVADIVSENLNEGTDTVQSSVT 2432
Query: 333 HKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--------- 382
+ ++E L I++V +IL + L G D
Sbjct: 2433 YLLT--GNIENLVLTGNIAINAVGNTLDNILTGNTANNTLNGAAGADTMSGGLGNDIYVV 2490
Query: 383 --MKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ EG D S Y
Sbjct: 2491 DNVGDVVTENAGEGTDTVQSSITYTLGNA 2519
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 9/139 (6%)
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD---LLDLTL 235
Y D V Q + ++ ++++ + T D+ D DL
Sbjct: 585 YIQITTPEDWVTHQASWQIGHSTVPDDVFYRNGYDLSTEINVTGTDAALGDVSLTTDLRT 644
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + +++ G N I+ + + + G ND++ G + ++ F G
Sbjct: 645 FTGAADQ------QGATLLGGTGNDLISGSSAADYIDGGDDNDILYGYAGDDNMFGGKGK 698
Query: 296 DVFDGSSGLDTFFYYAPSY 314
D G G D
Sbjct: 699 DYIVGGDGNDNIDGGTEDD 717
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 62/216 (28%), Gaps = 53/216 (24%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL-------------DLTLIGGVKNYIDLNTESWSS- 252
Y ++ +GG+D L ++ + G + DL
Sbjct: 802 YHGNDYLDGGEGTDQLWGNGGNDTLLGGDGNDHIEGDYNVAKLAGQYHGNDLIDGGAGDD 861
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSG--------------------------NDVVIGNSA 285
I G N TI + ++G G ND ++G +
Sbjct: 862 EILGEGGNDTIFGGAGDDLILGDGGGVSAEFEGDDVIDGGDGDDEISGDGGNDTLLGGAG 921
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ + GND DG +G D S + +A+ E D L
Sbjct: 922 KDKLYGGLGNDQLDGGAGDDRLHGGEDSDTLQGGSGHDALY----GEMGNDTLIGN---- 973
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D + Q + Y A DLI + QD
Sbjct: 974 -GDGDYLAGGAGQDT---YYAQAGDLIDDVDQDANT 1005
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 3/98 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++GS+ ND +IG + ++ GND +G G D Y + ++ D+
Sbjct: 1285 LIGSNQNDTLIGLNGDDGLIAGQGNDTLNGGQGHDILMGGTGDDRYLFNLGDGQDLIIDS 1344
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
N + + I + + +Y Y
Sbjct: 1345 NAENNTIVFGA---GISLDSITTQQSYGQDGKDYLTLY 1379
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 7/111 (6%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D++ + GG N T + + +N+T+ I + G++ N+ + GN+ +N
Sbjct: 2847 NDIVSESAGGGTDNVQSSITYTLTD---NVENLTLTGTNPI-NGTGNTLNNTITGNAGSN 2902
Query: 288 VFFESSGNDVFDGSSGLDTFFYY---APSYLYKIYRFENAIIVYDANEHKQ 335
+G D+ G +G DT+ + I I
Sbjct: 2903 TLDGGAGTDILVGGAGNDTYIVDLTATNTLQDSITEVAAGGIDTLVLRGGT 2953
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +++ G SG+D + G N+ + D G +G DT++ A
Sbjct: 934 LDGGAGDDRLHGGEDSDTLQGGSGHDALYGEMGNDTLIGNGDGDYLAGGAGQDTYYAQAG 993
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ + + N I + AN+ +E +
Sbjct: 994 DLIDDVDQDANTIKLGSANQDANAANVTMELVELD 1028
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY--YAPSYLYKIYRFENAIIVY 328
+ G SGND +IG + + G+D+ +G++G DT+ A I A
Sbjct: 1999 LYGDSGNDTLIGTALADELIGGEGDDILNGAAGADTYRVLAGANQGWDTINDSGYAKTQE 2058
Query: 329 DANEHKQD 336
+ + D
Sbjct: 2059 NGELNDLD 2066
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 32/114 (28%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
S T+ + G+ L + N + + G+ T
Sbjct: 2968 DNLDASATGMTLLNLTGNALANFMKGNSANNTLTDTAGGNDILQGFAGIDTFNDTVGNNL 3027
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G GND++ S ++ GND +G D + I A
Sbjct: 3028 FDGGLGNDLITAGSGRDIIIGGQGNDTITTGTGYDVIVFNKGDGQDIINASTGA 3081
Score = 43.6 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG+D+L G+ + D + G N I + + ++G GND + +
Sbjct: 3004 AGGNDIL--QGFAGIDTFNDTVGNNL--FDGGLGNDLITAGSGRDIIIGGQGNDTITTGT 3059
Query: 285 ANNV--FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+V F + G D+ + S+G D ++ Y + D ++
Sbjct: 3060 GYDVIVFNKGDGQDIINASTGADNTISLGGNFAYSDLSLTKSTNDLILKMGATDQIT 3116
>gi|113954869|ref|YP_729927.1| type I secretion target GGXGXDXXX repeat-containing protein
[Synechococcus sp. CC9311]
gi|113882220|gb|ABI47178.1| type I secretion target GGXGXDXXX repeat protein [Synechococcus sp.
CC9311]
Length = 246
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 69/201 (34%), Gaps = 30/201 (14%)
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA---------------PKGSLGNNIY 207
MS F P +S + A + + K YG+ + + ++
Sbjct: 1 MSEFRPPNSWEQFVQSFLAGWVWTGTDGDDKKYGSVQDDRLSGGSGNDRLNGYTGNDKLF 60
Query: 208 KIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + S T++ G D L GGV N + G +
Sbjct: 61 GDDGNDYLEGSDGDDTLWGGSGADYL----YGGVDND---------RLYGGSGQDYLIGQ 107
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G GND ++G N+ +G DV +G G DT + ++ + + I
Sbjct: 108 VGNDILDGGDGNDKLLGGWGNDTLAGGAGMDVLNGGDGNDTLTGGVGADVFVMSNGRDTI 167
Query: 326 IVYDANEHKQDFLSDVERLRF 346
+ + + F+ D+ +L
Sbjct: 168 TDFRIEDGDKIFVKDISQLLI 188
>gi|46241710|gb|AAS83095.1| putative outer membrane secretion protein-like protein
[Azospirillum brasilense]
Length = 342
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 17/141 (12%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
Q + T++ +GG+ + G N L T + I G + N TIA ++
Sbjct: 159 NQIFAAGNDTVFAAGGNATI----GAGTGNSQLLITGGNNLIAGGQGNTTIASAAGNNTI 214
Query: 272 VGSSGNDVVIGNSANNVFFES------------SGNDVFDGSSGLDTFFYYAPSYLYKI- 318
G SGN + G + N++ S +GND G G DT F + ++
Sbjct: 215 FGGSGNTTIAGGAGNDLLIGSTAKTGNAVIGGFAGNDTIIGGVGNDTLFGGEGNDIFVFS 274
Query: 319 YRFENAIIVYDANEHKQDFLS 339
F V + D ++
Sbjct: 275 TVFGGGKHVIGDFKAGTDLIA 295
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 10/189 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGGYEKN 259
+ T+ + GD++L + I N + ++ ++ N
Sbjct: 116 GTVAGASATIFGGAGADTVVAAAGDNVLTAGAGNNQIHAIGGNNQIFAAGNDTVFAAGGN 175
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI T ++ + GN+++ G N ++GN+ G SG T A + L
Sbjct: 176 ATIGAGTGNSQLLITGGNNLIAGGQGNTTIASAAGNNTIFGGSGNTTIAGGAGNDLLIGS 235
Query: 320 RFENAIIVYDANEHKQDFLSDV-ERLRFADQC-----IDSVNVKQRSILEYTASYEDLIQ 373
+ V + V F + +V + ++ + DLI
Sbjct: 236 TAKTGNAVIGGFAGNDTIIGGVGNDTLFGGEGNDIFVFSTVFGGGKHVIGDFKAGTDLIA 295
Query: 374 VIGQDVFES 382
V G + +
Sbjct: 296 VQGYGLTAA 304
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 58/177 (32%), Gaps = 31/177 (17%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTI-----AQHTVIE-------SVVGSSGND-- 278
L+LI + LNTE+ +++ G N + A TV++ +++G +G
Sbjct: 54 LSLISDSNTALVLNTETAATLLGGTGNNNVLVANDAAGTVLQAGTGTGQTLIGGAGGQLL 113
Query: 279 ----------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYRFE 322
+ G + + ++G++V +G + + ++
Sbjct: 114 GTGTVAGASATIFGGAGADTVVAAAGDNVLTAGAGNNQIHAIGGNNQIFAAGNDTVFAAG 173
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQD 378
+ + Q ++ L Q ++ + + + + G D
Sbjct: 174 GNATIGAGTGNSQLLITGGNNLIAGGQGNTTIASAAGNNTIFGGSGNTTIAGGAGND 230
>gi|157786912|ref|NP_001099395.1| matrix metalloproteinase-17 [Rattus norvegicus]
gi|149063179|gb|EDM13502.1| matrix metallopeptidase 17 (predicted) [Rattus norvegicus]
Length = 587
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 32 PDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIH-SDIKFIS 83
P + LS+ + +P ++ R +AL WS + L F E + + +DI+
Sbjct: 129 PTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNMADIQIDF 188
Query: 84 S----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALHE 127
S N+GY + + +FD + W + G L A+HE
Sbjct: 189 SKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVHE 248
Query: 128 IGHALGLMH 136
GHA+GL H
Sbjct: 249 FGHAIGLSH 257
>gi|397995|gb|AAB36691.1| LktA [Mannheimia haemolytica]
Length = 953
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N ++ G G D + GN N+ F G+D+ DG +G D F
Sbjct: 716 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDD--FIDGGKG 773
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVK 357
+ ++ + I D ++ ++L F+D + + +
Sbjct: 774 NHLLHGGKGVDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFE 819
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + TI + + + G G+D++ G + ++ GN + G G+D F +
Sbjct: 732 FNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNHLLHGGKGVDIFVHRQG 791
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
I E + ++ + +D
Sbjct: 792 DGNDSITESEGNDKLSFSDSNLKDL 816
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 7/105 (6%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 711 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 767
Query: 328 YDANEHKQ----DFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D + D+ R D + L ++ S
Sbjct: 768 IDGGKGNHLLHGGKGVDIFVHRQGDGNDSITESEGNDKLSFSDSN 812
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 709 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 764
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G D+F G D+ + + N H
Sbjct: 765 DDFIDGGKGNHLLHGGKGVDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 824
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 825 LVITNTKQEKVTI--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 872
>gi|84499459|ref|ZP_00997747.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
gi|84392603|gb|EAQ04814.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
Length = 780
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 41/131 (31%), Gaps = 16/131 (12%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YGA G N TI G D + V+ IDL + S
Sbjct: 594 YGAVAIIRGGN---GNDTINAGSGSDTIDGGAGIDTIRYANTSAVQ--IDLEAGTGSGFA 648
Query: 255 GYEKNMTIAQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
A+ +I E+VVGS+ D + G+ NN G D G G D
Sbjct: 649 --------AEGDIIVNVENVVGSNAADTLTGDGENNRLEGLYGEDTIKGGLGDDVLLGGG 700
Query: 312 PSYLYKIYRFE 322
+ +
Sbjct: 701 NADTFVFDAVG 711
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 51/161 (31%), Gaps = 12/161 (7%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+I G D + V I+L + G E ++ IE+VVG
Sbjct: 436 NGGAGADSIIGGSGVDTVRYASSSSVS--INLAANTAVG-GQAEGDVFFG----IENVVG 488
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIVY 328
S D ++GN N +G+D G G DT S +V
Sbjct: 489 SQEADTIVGNGQPNRIEGLAGDDHIRGGMGADTILGREGSDTASYQDSSVGIRIGHFLVG 548
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ D L VERL + V ILE +
Sbjct: 549 SGGTAEGDRLVQVERLLGSGHDDILVGGGVAPILEGGGGND 589
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 34/87 (39%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S +G +++ +++ G SG+D + G S +++ + G+D G SG DT
Sbjct: 278 GRDSFVGTGGTGVSLGGRDGNDTLTGGSGDDSLSGGSDHDLLYGGGGDDRLFGGSGNDTL 337
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHK 334
+ EN + A
Sbjct: 338 IGGPGADRLDGSIGENWVSYEFATSGA 364
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 18/187 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN----TESWSSIGGYEKNMTIAQH 265
P + S G++ + I L S + +
Sbjct: 334 NDTLIGGPGADRLDGSIGENWVSYEFATSGARRISLRGSPGEGGESQGDVLLNILNVRGS 393
Query: 266 TVIESVVGSS---------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ VG S G+D++IG + N+ SG+DV +G +G D+ +
Sbjct: 394 VHADLFVGDSEANRFTGLGGDDMIIGEAGNDTLDGGSGDDVINGGAGADSIIGGSGVDTV 453
Query: 317 KIYRFENAIIVYDANEHK-----QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + I AN D +E + + + V Q + +E A + +
Sbjct: 454 RYASSSSVSINLAANTAVGGQAEGDVFFGIENVVGSQEADTIVGNGQPNRIEGLAGDDHI 513
Query: 372 IQVIGQD 378
+G D
Sbjct: 514 RGGMGAD 520
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 5/160 (3%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ + G D GG + + ++ G + +++ + + + G G+D + G
Sbjct: 274 WGTRGRD--SFVGTGGTGVSLGGRDGND-TLTGGSGDDSLSGGSDHDLLYGGGGDDRLFG 330
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S N+ G D DGS G + Y + + + + E + D L ++
Sbjct: 331 GSGNDTLIGGPGADRLDGSIGENWVSYEFATSGARRISLRGS--PGEGGESQGDVLLNIL 388
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+R + V + + + +I G D +
Sbjct: 389 NVRGSVHADLFVGDSEANRFTGLGGDDMIIGEAGNDTLDG 428
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 12/156 (7%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + V + G GND+++ A + +GND + SG DT A
Sbjct: 566 GSGHDDILVGGGVAPILEGGGGNDLLMDYGAVAIIRGGNGNDTINAGSGSDTIDGGAGID 625
Query: 315 LYKIYRFENAIIVYDANEHK-----QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ I +A D + +VE + ++ + + LE +
Sbjct: 626 TIRYANTSAVQIDLEAGTGSGFAAEGDIIVNVENVVGSNAADTLTGDGENNRLEGLYGED 685
Query: 370 DLIQVIGQDVFESMKHFYEF-----GLSEGRDITFD 400
+ +G DV + F G GRD+ D
Sbjct: 686 TIKGGLGDDVLLGGGNADTFVFDAVGW--GRDLILD 719
>gi|74213270|dbj|BAE41762.1| unnamed protein product [Mus musculus]
Length = 465
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 62/209 (29%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
D LL W++ + Y+ T ++ + A WS
Sbjct: 93 VPDSGDFLLTPGSPKWTHTNLTYRIINHTPQLSRAEV-------KTAIEKAFHVWSVASP 145
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF E +DI +N P + +FD + W
Sbjct: 146 LTFTEILQGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWT-Q 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
K L A HE GH+LGL H YP Y Y S +Y +PQD
Sbjct: 205 DSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSLPQD-- 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG
Sbjct: 253 --------------DINGIQTIYGPSDNP 267
>gi|156365943|ref|XP_001626901.1| predicted protein [Nematostella vectensis]
gi|156213794|gb|EDO34801.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 61/187 (32%), Gaps = 46/187 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIK 80
W+ + Y + S + + A WS +LTF + ++DIK
Sbjct: 51 WNKTSLTYAFENYGDDMTS-------ATQENILARAFSMWSDNSNLTFTLVSDASNADIK 103
Query: 81 FISSNNGYVC--------TPRYDSRYFM---EINFDKADVWRYGIGKGTILSHNALHEIG 129
+ +F ++FD + + G+ GT L A+HEIG
Sbjct: 104 IAFVTGTHSNCIYPFDGQGSVLAHAFFPTDGSLHFDDDEDFTDGVATGTNLLAVAVHEIG 163
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H LG+ H N SVM P S D + DI
Sbjct: 164 HILGVGHSSETN-------------------SVM---NPNYSGYDPNLA----LHADDIN 197
Query: 190 AVQKIYG 196
AV +YG
Sbjct: 198 AVSYLYG 204
>gi|218512255|ref|ZP_03509095.1| putative rhizobiocin [Rhizobium etli 8C-3]
Length = 221
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--------IY 319
+E+V SGND ++GN A+N + ++GND G SG DT A + I
Sbjct: 1 MENVKAGSGNDTIVGNEADNTLWGNAGNDTLTGDSGNDTLDGGAGNDKLSGGVGNDVYIV 60
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
N ++ +ANE + + + Y + +++I
Sbjct: 61 DNANDTVIENANEGTDTVRTTGGDFTLGTNVENLTYIGTDGFAGYGNAADNVIT 114
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 31/156 (19%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSS- 275
T++ + G+D L T G +D + GG ++ I A TVIE+ +
Sbjct: 20 NTLWGNAGNDTL--TGDSGND-TLDGGAGNDKLSGGVGNDVYIVDNANDTVIENANEGTD 76
Query: 276 ---------------------GNDVV--IGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G D GN+A+NV + +D DG SG DT A
Sbjct: 77 TVRTTGGDFTLGTNVENLTYIGTDGFAGYGNAADNVITGGTRSDWLDGKSGADTLIGGAG 136
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
Y + + ++V + L+D+ A
Sbjct: 137 DDTYTVDSLGD-VVVEATDGGVDRILTDLTAYSLAG 171
>gi|159026031|emb|CAO87905.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 434
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 9/146 (6%)
Query: 227 GDDLLDLTLIG-GVKNYIDLNTESWSSIGGYEK-NMTIAQHTVIESVVGSSGNDVVIGNS 284
G + +D + G I+L+T S G + N T + V+G+SGND + G+
Sbjct: 220 GGNTIDSSTASLGASLSINLSTGGASVFGPFPTINRTFLN---FDDVIGTSGNDTITGDF 276
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---V 341
N+ SSG+DV G DT A + +Y+++ D ++D V
Sbjct: 277 QANILNGSSGDDVISAGGGNDTLVGGAGADTLT-GGTGTNTYIYNSSSEGADLITDFISV 335
Query: 342 ERLRFADQCIDSVNVKQRSILEYTAS 367
+R++ ++ S Y
Sbjct: 336 DRIQLRSSGFAGLSRGSLSARRYGEG 361
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ V G++ +D + G+S NN+ + GND F G++G DT +
Sbjct: 133 DDVSGTNQDDFIKGDSQNNLLRGNGGNDTFFGTTGNDTLEGGTGNDTAD 181
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY--APSYLYKIYRFENAIIVYD 329
G+ +D +G S N+ F SSGND+F+G SG DT Y + ++ ++ I+
Sbjct: 5 FGTIFDDNFVGTSFNDTFIGSSGNDIFNGGSGFDTADYSNLRNPFSSRVSVPQSITILPT 64
Query: 330 A----NEHKQDFLSDVERLR---FADQCIDSVNVKQRSIL 362
D L+ VER+ FA + +
Sbjct: 65 GKILKGSLGSDQLTSVERILANPFASNNLIDASTAAAPSF 104
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
++ ++ + G ++ I + + G+ GND G + N+ +GND D
Sbjct: 125 LNFTVNNFDDVSGTNQDDFIKGDSQNNLLRGNGGNDTFFGTTGNDTLEGGTGNDTAD 181
>gi|400425|emb|CAA81206.1| leukotoxin A [Mannheimia haemolytica]
Length = 955
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 725 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 784
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 785 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 821
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 713 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 769
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 770 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 814
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 87/278 (31%), Gaps = 16/278 (5%)
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
V G G + + EI G G Y +D E + +V F+
Sbjct: 610 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNR-FVE 668
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
+ + + ++ + + G Y + K ++ I + +
Sbjct: 669 SGKALHEGTSTHTALVGNREEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHN 722
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D+ + N D +I G + N + + + G +G+D + G N++
Sbjct: 723 DIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDL 778
Query: 289 FFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLR 345
G+D+F G D+ + + N H + E++
Sbjct: 779 LHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHHLVITNTKQEKVT 838
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
Q ++I Y A+ +D I+ I E +
Sbjct: 839 I--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 874
>gi|159042968|ref|YP_001531762.1| beta-Ig-H3/fasciclin [Dinoroseobacter shibae DFL 12]
gi|157910728|gb|ABV92161.1| beta-Ig-H3/fasciclin [Dinoroseobacter shibae DFL 12]
Length = 510
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + +G +GND + G + +G DV G G D A
Sbjct: 375 VSGLGGNDVIRLGAGDDVGLGGAGNDTLQGGRGADTLDGGAGRDVLKGGLGDDLLTGGAD 434
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS 339
+ ++ F A + D +D L
Sbjct: 435 ADVFLFNGFSGADTITD-FSLGEDLLQ 460
Score = 41.3 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 42/151 (27%), Gaps = 37/151 (24%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS---------- 275
G L+D G I+ + + + I + + I + G
Sbjct: 304 DGVSLVDADPDIGDPALIETDIAATNGIAHVLDGVLLPAD--ILNGDGGRGRVDFEIGDA 361
Query: 276 ------------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--- 314
GNDV+ + ++V +GND G G DT A
Sbjct: 362 GNERFFTGANTDFVSGLGGNDVIRLGAGDDVGLGGAGNDTLQGGRGADTLDGGAGRDVLK 421
Query: 315 ----LYKIYRFENAIIVYDANEHKQDFLSDV 341
+ +A + D ++D
Sbjct: 422 GGLGDDLLTGGADADVFLFNGFSGADTITDF 452
>gi|254504235|ref|ZP_05116386.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222440306|gb|EEE46985.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 342
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 8/127 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYI------DLNTESWS--SIGGYEKNMTIAQHTVIESVVG 273
++ + L D T G +I DL +I G+ + + + ++G
Sbjct: 174 VWVEDINPLFDPTGHQGDDAFILGSNKDDLLAGKSGKDAIEGFAGDDHLKGEGGADRLIG 233
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND + G + ++V +G D G G D F + + +I FE I D +
Sbjct: 234 GAGNDTLDGGAGDDVMVGGAGADTLYGGGGADIFIFASGDGADEIKDFEVGIDKIDVSGA 293
Query: 334 KQDFLSD 340
SD
Sbjct: 294 GVTQFSD 300
>gi|326316855|ref|YP_004234527.1| hemolysin-type calcium-binding domain-containing protein
[Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373691|gb|ADX45960.1| hemolysin-type calcium binding domain protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 1423
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 33/75 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +++ G G+D + G+ ++V +GND G G +TF +
Sbjct: 913 TLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAGNDYLHGGFGNNTFIFGR 972
Query: 312 PSYLYKIYRFENAII 326
+I + + +
Sbjct: 973 GDGQDRIDHYHDTAV 987
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 33/75 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +++ G G+D + G+ ++V +GND G G +TF +
Sbjct: 1098 TLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAGNDYLHGGFGNNTFIFGR 1157
Query: 312 PSYLYKIYRFENAII 326
+I + + +
Sbjct: 1158 GDGQDRIDHYHDTAV 1172
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 38/88 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ ++++G +GND + G + ++ +G D+ G SG DT+ +
Sbjct: 1248 LTGTPGDDTLYGTQAADTLLGGTGNDTLYGGAGDDTLEGGAGQDLLVGGSGNDTYLFSRG 1307
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
S +I ++ D +D
Sbjct: 1308 SQADRIVDEDSTSGNVDVLSVGPGVATD 1335
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 32/74 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + +++ G G+D + G+ ++V +GND G G +TF +
Sbjct: 729 MRGGAGNDQLQGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAGNDYLHGGFGNNTFIFGRG 788
Query: 313 SYLYKIYRFENAII 326
+I + + +
Sbjct: 789 DGQDRIDHYHDTAV 802
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I +++ G +GND + G N+ G+D G G D A
Sbjct: 896 IDGLAGDDQIYGQNGNDTLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAG 955
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ Y F N ++ QD +
Sbjct: 956 ND-YLHGGFGNNTFIF-GRGDGQDRI 979
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I +++ G +GND + G N+ G+D G G D A
Sbjct: 1081 IDGLAGDDQIYGQNGNDTLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAG 1140
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ Y F N ++ QD +
Sbjct: 1141 ND-YLHGGFGNNTFIF-GRGDGQDRI 1164
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G N+ A + + G +GND + G N+ G+D G G D A
Sbjct: 712 LGDETANV-FAGGAGDDLMRGGAGNDQLQGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAG 770
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ Y F N ++ QD +
Sbjct: 771 ND-YLHGGFGNNTFIF-GRGDGQDRI 794
>gi|221118686|ref|XP_002165116.1| PREDICTED: similar to conserved hypothetical protein [Hydra
magnipapillata]
Length = 597
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 62/189 (32%), Gaps = 46/189 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
WS + YK T + + A +WS+V LTF +D+
Sbjct: 88 WSKNVLTYKIINHTPDLGP-------AETARIIQEAFNKWSQVTPLTFTRGYGATDMTVD 140
Query: 83 SSNN-----GYVCTPRYD---SRYFME---INFDKADVWRYGIGKGTILSHNALHEIGHA 131
N GY +F +FD+ + + GT L A HE GHA
Sbjct: 141 FGNLRHSSCGYDFDGPGGVLAHAFFPTDGRTHFDEDEHFTDKNTAGTNLLWVAAHEFGHA 200
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYCATPMVSDIVA 190
LGL H + S+M Y+ + +DI
Sbjct: 201 LGLEHS-------------------TVQGSLMYPYYQG--------YKEPFVLHQNDISR 233
Query: 191 VQKIYGAPK 199
+Q++YGA K
Sbjct: 234 IQQLYGARK 242
>gi|114640109|ref|XP_001153941.1| PREDICTED: matrix metalloproteinase 3 isoform 1 [Pan troglodytes]
Length = 447
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 52/190 (27%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 79 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 131
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 132 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 190
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 191 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 226
Query: 189 VAVQKIYGAP 198
+Q +YG P
Sbjct: 227 NGIQSLYGPP 236
>gi|26354566|dbj|BAC40911.1| unnamed protein product [Mus musculus]
Length = 465
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 62/209 (29%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
D LL W++ + Y+ T ++ + A WS
Sbjct: 93 VPDSGDFLLTPGSPKWTHTNLTYRIINHTPQLSRAEV-------KTAIEKAFHVWSVASP 145
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF E +DI +N P + +FD + W
Sbjct: 146 LTFTEILQGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWT-Q 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
K L A HE GH+LGL H YP Y Y S +Y +PQD
Sbjct: 205 DSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSLPQD-- 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG
Sbjct: 253 --------------DINGIQTIYGPSDNP 267
>gi|330890711|gb|EGH23372.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 1688
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 12/170 (7%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +++ DD L D +L G N I S+ G + T+ + +
Sbjct: 51 TTDGNDSVWGYATDDTLNGGLGDASLYGQAGNDILQGGAGADSLSGESGDDTLLGDSGND 110
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-------IYRFE 322
+ G SG D + G + GND G +G DT + + + + +
Sbjct: 111 YLYGGSGIDQLSGGEGADYLTGGEGNDTLLGDAGNDTLYGDSGNDQLDGGTGNDYLTAGD 170
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + QD +++ + ++ + + T SY DLI
Sbjct: 171 GSDVYRFSRGWGQDSINNYDSSAGKTDAVEFAADILPADVIVTRSYTDLI 220
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 5/137 (3%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ Y + Q T++D L G + I + + G E + +
Sbjct: 996 DQTYGYAINQLQFADG-TVWDQAKITSALLIGTEGSDSII--GYATADELAGLEGDDVLN 1052
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G D + G ++ GND DG +G DT A + + +
Sbjct: 1053 GRAGDDLLSGGEGRDTLNGEDGDDTLLGGLGNDTLDGGAGNDTLDGGAGND--SLEGGKG 1110
Query: 324 AIIVYDANEHKQDFLSD 340
+ QD +S+
Sbjct: 1111 SDTYIYRKGSGQDTISN 1127
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 15/120 (12%)
Query: 221 TIYD-----------SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI+D + G+D + + + N + G N + +
Sbjct: 828 TIWDRAHITAALLDGTDGNDTITGYDTADTLSGLAGNDT----LNGRNGNDLLDGGDGKD 883
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G +G+D ++G + N+ GND DG +G D+ S Y + IVY+
Sbjct: 884 SLNGEAGDDFLLGGAGNDTLSGGEGNDTLDGGTGNDSLEGGIGSDTYIFRKGSGQDIVYN 943
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + +++ G GND ++G + N+ GND+ DG SG D
Sbjct: 1419 LSGRTGNDLLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFG 1478
Query: 313 SYLYKIYRFENAIIVYD 329
S Y R + +
Sbjct: 1479 SDTYVFRRGAGQDTISN 1495
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G T++ + + + G GND++ GN+ +++ + + GND+ DG +G DT
Sbjct: 312 TLYGGTGQDTLSGGSGSDYLYGEEGNDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGR 371
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S +Y+ + + + N + + V+ ++ + + Y +S + +
Sbjct: 372 GSDIYRFAKGYGQDSI-NNNSYGETATDKVDAIQLDG-------LNSADLRFYRSSDDLV 423
Query: 372 IQVIGQ-DVFESMKHFYEFG 390
IQ+ D HF + G
Sbjct: 424 IQIKATGDTLTVRSHFSQDG 443
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + + +++ G GND ++G + N+ G+DV DG SG D+
Sbjct: 496 SLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGNDSLNGGYGDDVLDGGSGNDSLDGGY 555
Query: 312 PSYLYKIYRFENAIIVYDA 330
S Y + + +
Sbjct: 556 GSDTYVFRKGSGQDTISNG 574
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + N +++ + + G +G D + G N+ +GND +G G D +
Sbjct: 487 SLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGNDSLNGGYGDDVLDGGS 546
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + + QD +S+
Sbjct: 547 GNDSLDGGYGSDTYVFRKGS--GQDTISN 573
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ +++ G G D ++G + N+ +G+DV DG +G DT
Sbjct: 681 TLSGGLGNDTLRGGAGRDTLYGDDGADTLLGGADNDSLAGGNGDDVLDGGTGNDTLEGGK 740
Query: 312 PSYLYKIYRFENAIIVYDAN 331
S Y + + + +++
Sbjct: 741 GSDTYIFAKGAGSDAIDNSS 760
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND ++G + N+ GNDV DG +G DT S Y + + +
Sbjct: 1252 TLNGEDGNDTLLGGAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGKGYGRDTISN 1311
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + +I + + V G GND++ G + N++ G D +G G DT A +
Sbjct: 1394 GAESDDSITGYASDDRVSGGDGNDILSGRTGNDLLEGGRGKDTLNGEEGNDTLLGGAGND 1453
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ N I+ + D + F
Sbjct: 1454 TLN-GGYGNDILDGGSGNDALDGGFGSDTYVF 1484
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+ GND+ DG +G D+ S Y + I+ +
Sbjct: 1620 TLYGEDGNDTLQGGTGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTYVFRKGSGQDIISN 1679
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 79/236 (33%), Gaps = 55/236 (23%)
Query: 200 GSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
+ GN+ Y + ++Y G+D+L +L G + L
Sbjct: 51 TTDGNDSVWGYATDDTLNGGLGDASLYGQAGNDILQGGAGADSLSGESGDDTLLGDSGND 110
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G ++ + + G GND ++G++ N+ + SGND DG +G D
Sbjct: 111 YLYGGSGIDQLSGGEGADYLTGGEGNDTLLGDAGNDTLYGDSGNDQLDGGTGNDYLTAGD 170
Query: 312 PSYLYKIYRF--ENAIIVYDANEHKQDFLSD----------------------------- 340
S +Y+ R +++I YD++ K D +
Sbjct: 171 GSDVYRFSRGWGQDSINNYDSSAGKTDAVEFAADILPADVIVTRSYTDLILSLKDSADRI 230
Query: 341 ---------------VERLRFADQCI-DSVNVKQRSILEYTASYEDLIQVIGQDVF 380
VE++RFAD + +K + +T + L D
Sbjct: 231 TISGYFQNDGDTPYTVEQIRFADGTHWNVEQIKSMAAFTFTDGNDALTGYASDDRI 286
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 3/122 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
VV + GND V G + ++ G+ G +G D A + ++ ++
Sbjct: 49 VVTTDGNDSVWGYATDDTLNGGLGDASLYGQAGNDILQGGAGADSLSGESGDDTLLGDSG 108
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYE 388
N++ S +++L + + L A + L G D + +
Sbjct: 109 NDYLYGG-SGIDQLSGGEGADYLTGGEGNDTLLGDAGNDTLYGDSGNDQLDGGTGNDYLT 167
Query: 389 FG 390
G
Sbjct: 168 AG 169
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 12/141 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY + I + + G +GNDVV G+ ++ + +G D G SG D +
Sbjct: 277 LTGYASDDRIVGGMGDDVLSGLAGNDVVNGDEGSDTLYGGTGQDTLSGGSGSDYLYGEEG 336
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFL---SDVERLRFADQCIDSVNVKQRSILEY 364
+ L + + D N+ D L + RFA + Y
Sbjct: 337 NDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIYRFAKGY----GQDSINNNSY 392
Query: 365 TASYEDLIQVIGQDVFESMKH 385
+ D + I D S
Sbjct: 393 GETATDKVDAIQLDGLNSADL 413
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 11/124 (8%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--- 316
+ + +SV G + +D + G + + +GND+ G +G D+ +
Sbjct: 47 IAVVTTDGNDSVWGYATDDTLNGGLGDASLYGQAGNDILQGGAGADSLSGESGDDTLLGD 106
Query: 317 --KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y + + I + D+L+ E + L + + L
Sbjct: 107 SGNDYLYGGSGIDQLSGGEGADYLTGGE------GNDTLLGDAGNDTLYGDSGNDQLDGG 160
Query: 375 IGQD 378
G D
Sbjct: 161 TGND 164
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 5/98 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + G G D + G N+ +GND G G D +
Sbjct: 1596 GLSGNDILYGRQGDDFLDGGDGKDTLYGEDGNDTLQGGTGNDTLSGGYGNDLLDGGNGND 1655
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ + + QD +S+ + D +D
Sbjct: 1656 SLDGGYGSDTYVFRKGS--GQDIISN---YAYNDTTVD 1688
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 7/124 (5%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+++ G + +D ++G ++V +GNDV +G G DT +
Sbjct: 267 AFTFTDGNDALTGYASDDRIVGGMGDDVLSGLAGNDVVNGDEGSDTLYGGTGQDTLS--- 323
Query: 321 FENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ Y E D L+ + L AD L+ + G
Sbjct: 324 -GGSGSDYLYGEEGNDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIYRFAKGY 382
Query: 378 DVFE 381
Sbjct: 383 GQDS 386
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 8/104 (7%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G + + GND G +G D + + ++ D
Sbjct: 477 DTLTGYPSADSLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLL----GRAGNDS 532
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
L+ + D +D + Y + + GQD
Sbjct: 533 LNG----GYGDDVLDGGSGNDSLDGGYGSDTYVFRKGSGQDTIS 572
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 53/179 (29%), Gaps = 27/179 (15%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV-------VGSSGNDVV 280
DDLL G I + S G + A T+ + +G+ +D +
Sbjct: 1158 DDLLIQIRQTGETLRISSHFTVDQSYGYAINQLQFADGTLWDEAQITAALLIGTESDDSI 1217
Query: 281 IGNSANNVFFESSGND------------------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
G ++ + GND +G G DT A +
Sbjct: 1218 TGYASGDKLSGLVGNDILSGRGGDDVLDGGDGKDTLNGEDGNDTLLGGAGNDSLS-GGIG 1276
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N ++ A D + F + + + + T D+I++ G +
Sbjct: 1277 NDVLDGGAGNDTLDGGKGSDTYVF-GKGYGRDTISNYAYNDTTVDKLDVIRLEGLTSED 1334
>gi|113476200|ref|YP_722261.1| cadherin [Trichodesmium erythraeum IMS101]
gi|110167248|gb|ABG51788.1| Cadherin [Trichodesmium erythraeum IMS101]
Length = 2145
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 55/176 (31%), Gaps = 12/176 (6%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F T + GG+D + G ++ L I G N T++ +S+ G
Sbjct: 272 GSAFTDTFFGLGGNDTV----FGQGESDSILGQGGNDQINGNRGNDTVSGGVGNDSIRGG 327
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIYRFENAII 326
D ++G++ N++ D G G DT + + + + I+
Sbjct: 328 RDADSLLGDAGNDIVLGDRDLDTIRGGEGRDTIYGGKENDDVAGGEDNDFVSGDVGDDIV 387
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
V D S + + + + + L G D +
Sbjct: 388 VGDGGNDTLLGQSGFDTISGGLGFDIISGGQDADSISGNEDNDSLSGNQGNDTIDG 443
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
Query: 227 GDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
G+D +D +L GG N + L E +I G +N T+ + + G GND V
Sbjct: 437 GNDTIDGGTGDDSLSGGKDNDLLLGGEGRDTINGERQNDTVDGMEENDFLSGGKGNDSVD 496
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFF---YYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
G +++ G+D G G D+F + LY + F A +
Sbjct: 497 GGQGDDLLIGGRGDDTLTGGEGQDSFVIIDFEESDNLYTVTDFNTAEDLISLEGG----- 551
Query: 339 SDVERLRFADQCIDSVNVKQRSIL 362
E L +D D+V +
Sbjct: 552 LRFEDLAISDDGGDTVIRNANDDI 575
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 11/143 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVK--------NYIDLNTESWSS 252
+++ I + S T ++ G D L+ T+ G+ N +++ E+ S
Sbjct: 1884 DDDVLGISAIVEGSQVQYTSLETRGTGVDTLEYTVTDGIDQVTANAIVNVLNVTDEADS- 1942
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E N +++ G GND + GN N+ G+D DG G DT F
Sbjct: 1943 LPGGEFNDNFDGDQGDDTLEGLGGNDTLTGNDDNDSLVGGEGDDSIDGGEGDDTLFGGLG 2002
Query: 313 SYLYKIYRFENAIIVYDANEHKQ 335
+ + +N + A++ +
Sbjct: 2003 ADILSDDNGDNTFVYTRADDGSE 2025
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 59/197 (29%), Gaps = 22/197 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
Q + T+ G+D + +L+G N I L +I G E TI
Sbjct: 301 GGNDQINGNRGNDTVSGGVGNDSIRGGRDADSLLGDAGNDIVLGDRDLDTIRGGEGRDTI 360
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-- 320
+ V G ND V G+ +++ GND G SG DT + +
Sbjct: 361 YGGKENDDVAGGEDNDFVSGDVGDDIVVGDGGNDTLLGQSGFDTISGGLGFDIISGGQDA 420
Query: 321 ---FENAIIVYDANEHKQDFL------------SDVERLRFADQCIDSVNVKQRSILEYT 365
N + D + D + L + +Q ++
Sbjct: 421 DSISGNEDNDSLSGNQGNDTIDGGTGDDSLSGGKDNDLLLGGEGRDTINGERQNDTVDGM 480
Query: 366 ASYEDLIQVIGQDVFES 382
+ L G D +
Sbjct: 481 EENDFLSGGKGNDSVDG 497
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 42/134 (31%), Gaps = 11/134 (8%)
Query: 215 DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G D + D+ G + I N ++ S + G + N TI T
Sbjct: 389 GDGGNDTLLGQSGFDTISGGLGFDIISGGQDADSISGNEDNDS-LSGNQGNDTIDGGTGD 447
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G ND+++G + ND DG D +
Sbjct: 448 DSLSGGKDNDLLLGGEGRDTINGERQNDTVDGMEENDFLSGGKGNDSVD----GGQGDDL 503
Query: 329 DANEHKQDFLSDVE 342
D L+ E
Sbjct: 504 LIGGRGDDTLTGGE 517
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 5/110 (4%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V GS+ D G N+ F +D G G D + ++I
Sbjct: 270 VFGSAFTDTFFGLGGNDTVFGQGESDSILGQGGNDQINGNRGNDTVSGGVGNDSI---RG 326
Query: 331 NEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTAS-YEDLIQVIGQD 378
L D + D+ +D++ + Y +D+ D
Sbjct: 327 GRDADSLLGDAGNDIVLGDRDLDTIRGGEGRDTIYGGKENDDVAGGEDND 376
>gi|320327023|gb|EFW83037.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 1610
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMIFGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ +V D
Sbjct: 447 YRTATTSATDLVTD 460
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 8/140 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G G D + +
Sbjct: 1452 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGVGDDVLIGGSGADTLIGGTG 1509
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+ + ++NE L D+
Sbjct: 1510 ADRYVFNNSNETGLGGLRDI 1529
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G G+D + G++ ++ +G D G G DTF Y A + Y+ Y
Sbjct: 810 DTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSALTDSYRDYDAGG----L 865
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A + DF +++ + + + L
Sbjct: 866 TATDTIYDFTPGQDKIDVSALGFLGLGNGEDHTLY 900
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N+T T E+ G+ G+D ++G ++ +G D+ +G +G D + +
Sbjct: 786 VGNVTPGVLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGA 845
Query: 314 YLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ ++ YDA D + D
Sbjct: 846 DTFVYSALTDSYRDYDAGGLTATDTIYDF 874
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L I+S ++++ AS L G D+
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINSTGNALKNVITGNASNNVLDGAAGADLLTG 1340
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GNDV+ GN+ + +G D+ +G + D A + L+ ++ Y
Sbjct: 541 DTLTGTDGNDVMNGNAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY 600
Query: 329 DANEHKQ-DFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYED 370
A+ KQ D ++D +R+ + + + + + Y + D
Sbjct: 601 TASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 1223 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTE 1275
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + S+GN +V+ GN++NNV ++G
Sbjct: 1276 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINSTGNALKNVITGNASNNVLDGAAGA 1335
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 1336 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 1395
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 1396 NATGNTLDNLIYAGAGDNVMDGRDGN 1421
>gi|332968742|gb|EGK07793.1| hemolysin [Kingella kingae ATCC 23330]
Length = 956
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 250 WSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+S K I +++ G+ G+D + G + ++ + +G+D+ DG G D
Sbjct: 725 FSDTFKGSKFADIFHGGDGNDTLEGNDGDDRLFGGNGDDHLYGGNGDDLLDGGKGNDVIN 784
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ +Y + + +YD+ ++L FAD + + ++
Sbjct: 785 GGDGNDVYISRKGDGNDTLYDS--------HGSDKLAFADADLSELTIE 825
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 42/131 (32%), Gaps = 16/131 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ K S F + G+D L N D + G + +
Sbjct: 724 QFSDTFKGSKFADIFHGGDGNDTL-------EGNDGDDR------LFGGNGDDHLYGGNG 770
Query: 268 IESVVGSSGNDVVIGNSANNVFFE--SSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENA 324
+ + G GNDV+ G N+V+ GND S G D F A I R
Sbjct: 771 DDLLDGGKGNDVINGGDGNDVYISRKGDGNDTLYDSHGSDKLAFADADLSELTIERTAQG 830
Query: 325 IIVYDANEHKQ 335
I++ +
Sbjct: 831 IMIKRNDGSGS 841
>gi|119387287|ref|YP_918321.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119377862|gb|ABL72625.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 245
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN++ + + GG++ + L G N ++ +I G
Sbjct: 60 GGSGNDVIKALGGNDRITAGEGNDVVQAGGGNNTISL----GSGNDRSVSGGGRDTISGG 115
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N TI + + G G+D + G + ++ GND +G G DT + ++
Sbjct: 116 EGNDTIRAGGGNDLIRGGEGDDRLFGEAGHDRIIAGEGNDTLNGGRGNDTMTGGEGADVF 175
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 16/183 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ F I+ GDDLL G N ++ G E N I + ++G
Sbjct: 15 GTKFADQIWGRSGDDLL----FGRAGND---------TLDGGEGNDRIDAGSGHNRIIGG 61
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SGNDV+ N+ GNDV G +T + + + + +
Sbjct: 62 SGNDVIKALGGNDRITAGEGNDVVQAGGGNNTISLGSGND--RSVSGGGRDTISGGEGND 119
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
L + D + + + + L G D + F +
Sbjct: 120 TIRAGGGNDLIRGGEGDDRLFGEAGHDRIIAGEGNDTLNGGRGNDTMTGGEGADVFVWNG 179
Query: 394 GRD 396
GRD
Sbjct: 180 GRD 182
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 10/112 (8%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ D + G S +++ F +GND DG G D + I+ +
Sbjct: 13 LVGTKFADQIWGRSGDDLLFGRAGNDTLDGGEGNDRIDAGSGHNR----------IIGGS 62
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L +R+ + + + + + + G+D
Sbjct: 63 GNDVIKALGGNDRITAGEGNDVVQAGGGNNTISLGSGNDRSVSGGGRDTISG 114
>gi|296480369|gb|DAA22484.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Bos
taurus]
Length = 477
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 60/197 (30%), Gaps = 48/197 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T AL W +V LTF +DI
Sbjct: 109 WRKTHLTYRIVNYTKDLPR-------DAVDSAIEKALTVWEEVTPLTFSRIYEGEADIMI 161
Query: 82 IS-----------SNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
I G V Y S ++ + +FD + W G L A HE+
Sbjct: 162 IFAIREHGDFLPFDGPGKVLAHAYPPGSGFYGDAHFDDDEQWTKDT-SGINLFLVAAHEL 220
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YPVY D F S D
Sbjct: 221 GHSLGLQHSTEREALMYPVYDPRTDLTR--FRLS-----------------------QDD 255
Query: 188 IVAVQKIYGAPKGSLGN 204
+ +Q +YG+P S +
Sbjct: 256 VDGIQFLYGSPPVSPND 272
>gi|163851849|ref|YP_001639892.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|163663454|gb|ABY30821.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
Length = 503
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 68/194 (35%), Gaps = 16/194 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+G + LDL + N + +++ G + + ++ + G +G+D +IG
Sbjct: 141 AGANGTLDLQFASSIDNAQLSGIIVRQANTLTGGPGSDYLVGGVGVDVLSGGAGDDALIG 200
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---- 338
+ N+ GND DG D +Y + + +V +A++ D +
Sbjct: 201 QAGNDHLHGDDGNDTLDGGLNADHMSGGLGDDVYGVDDLGD--VVIEASDAGFDTVYSSI 258
Query: 339 -----SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
+DVE L + + + L A + L G D +
Sbjct: 259 FYVLPADVEALILTGLEDLSGTGNDGANTLAGNAGHNVLTGGGGNDLYGVDGNGDTVVEA 318
Query: 391 LSEGRDITFDSYLY 404
+ G D + S Y
Sbjct: 319 IDGGYDEVYSSGDY 332
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 67/190 (35%), Gaps = 27/190 (14%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
D+ D + + +D+ A+ GN+ + + GG+
Sbjct: 247 SDAGFDTVYSSIFYVLPADVEALILTGLEDLSGTGND---GANTLAGNAGHNVLTGGGGN 303
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES---------VVGSSGNDV 279
DL + G ++ + + + T+A++ IE+ G++ N+
Sbjct: 304 DLYGVDGNG--DTVVEAIDGGYDEVYS-SGDYTMAEN--IETLFLTGSAVYATGNATNNA 358
Query: 280 VIGNSANNVFFESS----------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+IGN +NV + GND+ G +G D A + +++ +A +
Sbjct: 359 IIGNDLDNVIDAGAGDFEFINGAGGNDLLIGGAGHDEIMGGAGNDVFRFTSLSDAGDFFF 418
Query: 330 ANEHKQDFLS 339
+D +
Sbjct: 419 DFSPGEDKIQ 428
>gi|75910923|ref|YP_325219.1| glycerophosphoryl diester phosphodiesterase [Anabaena variabilis
ATCC 29413]
gi|75704648|gb|ABA24324.1| Glycerophosphoryl diester phosphodiesterase [Anabaena variabilis
ATCC 29413]
Length = 1027
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 60/196 (30%), Gaps = 47/196 (23%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKN---YIDLN-TESWSSIGGYEKN 259
DSP TI G+D + D ++ G N +I +N S ++ G N
Sbjct: 793 GDGADTVDSPGNNTISTGNGNDTVFVGSDASVSTGNGNDQVFIGVNGPTSNTTANGGNGN 852
Query: 260 MTI----AQHT-------------VIE----SVVGSSGNDVVIGNSANNVFFESSG---- 294
I A + VIE G SGND + N + N SG
Sbjct: 853 DEITVIEAGGSNNLFGAAGNDTLQVIEGSRQFAFGGSGNDTLTSNGSYNRLNGGSGDDKL 912
Query: 295 ----NDVFDGSSGLDTFFYY--------APSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
ND G G D F + + + + + + DF V+
Sbjct: 913 FSNVNDSLFGGDGDDVLFAGQAGSNRLSGGAGTDQFWIANGS--LPTSKNTVTDFAVGVD 970
Query: 343 RLRFADQCIDSVNVKQ 358
++ + +
Sbjct: 971 KIGLGGIGVTQFSALS 986
>gi|167031206|ref|YP_001666437.1| hypothetical protein PputGB1_0186 [Pseudomonas putida GB-1]
gi|166857694|gb|ABY96101.1| conserved repeat domain protein [Pseudomonas putida GB-1]
Length = 6753
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V YI + + G + N ++ + + G GND + G N++ SG
Sbjct: 6569 TTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGGNDTLDGGRGNDILLGGSG 6628
Query: 295 NDVFDGSSGLDTFFYYAPSYLY--KIYRFENAII 326
ND G G D + + + K F N +I
Sbjct: 6629 NDTLIGGHGDDILIGGSGADTFVWKAGDFGNDVI 6662
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A+Q Y A K + + + T +D G + L GG N I
Sbjct: 6552 ALQ-TYVAQKSGVEVSSVTTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGG 6610
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---ESSGNDVF 298
++ G N + + ++++G G+D++IG S + F GNDV
Sbjct: 6611 NDTLDGGRGNDILLGGSGNDTLIGGHGDDILIGGSGADTFVWKAGDFGNDVI 6662
>gi|117956039|gb|ABK58601.1| RtxA [Kingella kingae]
Length = 956
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 250 WSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+S K I +++ G+ G+D + G + ++ + +G+D+ DG G D
Sbjct: 725 FSDTFKGSKFADIFHGGDGNDTLEGNDGDDRLFGGNGDDHLYGGNGDDLLDGGKGNDVIN 784
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ +Y + + +YD+ ++L FAD + + ++
Sbjct: 785 GGDGNDVYISRKGDGNDTLYDS--------HGSDKLAFADADLSELTIE 825
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 52/169 (30%), Gaps = 16/169 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ K S F + G+D L N D + G + +
Sbjct: 724 QFSDTFKGSKFADIFHGGDGNDTL-------EGNDGDDR------LFGGNGDDHLYGGNG 770
Query: 268 IESVVGSSGNDVVIGNSANNVFFE--SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G GNDV+ G N+V+ GND S G D + A + L ++ A
Sbjct: 771 DDLLDGGKGNDVINGGDGNDVYISRKGDGNDTLYDSHGSDKLAF-ADADLSELTIERTAQ 829
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ E + Q N I + D I
Sbjct: 830 GIMIKRNDGSGSINMAEWYKTLSQQNYHGNATDDKIEQIIGKNGDYITS 878
>gi|256829125|ref|YP_003157853.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256578301|gb|ACU89437.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 8980
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 9/162 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++ + ++ G D LD + + + + S +N+
Sbjct: 8591 AGDDTVTAVDAVAGEDGLLIVFGESGSDTLDASAWNSGVVFFGDDGVATSRGSMTPENL- 8649
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ES GND++IG + N++ G+D+ G +G D A ++
Sbjct: 8650 ----VSLESAAPAGDGNDILIGGTGNDILIGVGGDDMLRGGAGNDVLIGDAGRVTFRNGE 8705
Query: 321 -FENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQR 359
+E + ++ D L F + D
Sbjct: 8706 LYEAGTLGRYSSSDGDDTLDGGAGNDFMFGGEGSDLFYGDLS 8747
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 45/153 (29%), Gaps = 18/153 (11%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN---MTIAQHTVIESV---------- 271
G+D+L IGG N I + + G N + A +
Sbjct: 8659 GDGNDIL----IGGTGNDILIGVGGDDMLRGGAGNDVLIGDAGRVTFRNGELYEAGTLGR 8714
Query: 272 -VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
S G+D + G + N+ F G+D+F G D + E I + D
Sbjct: 8715 YSSSDGDDTLDGGAGNDFMFGGEGSDLFYGDLSEDVMIGKYGKVTLSGGKVEEVIALGDL 8774
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
L +E + + +
Sbjct: 8775 ISQTMIDLYSIEETLGGSRGRSTGQGAPLTSQP 8807
>gi|90581647|ref|ZP_01237437.1| putative RTX toxin [Vibrio angustum S14]
gi|90437177|gb|EAS62378.1| putative RTX toxin [Vibrio angustum S14]
Length = 3056
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 12/187 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
N Y + ++ ++ D+ +LT+ G L E +SIG
Sbjct: 2852 NDYTFSAGKANAGG----WEVDLADIANLTMTGNSAQDFTLTIEPNASIG---NQTATGT 2904
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
I+ + SG++ ++G ++++V GND+ G SG D+F + + ++
Sbjct: 2905 TQTIDFKIAVSGDNTLVGTASDDVIIGGKGNDIMSGDSGNDSFIFKSDDLGSNSVPAQDT 2964
Query: 325 IIVYD--ANEHKQDF---LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
I+ +D N D LS+V AD ID L + D+ Q I D
Sbjct: 2965 ILDFDTTINSDNIDLSAILSNVTDGISADNYIDITENNGSVTLHVKDNGTDVTQEITLDN 3024
Query: 380 FESMKHF 386
+
Sbjct: 3025 VSKDALY 3031
>gi|6572429|emb|CAA58520.2| MT-MMP [Mus musculus]
Length = 582
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 51/173 (29%), Gaps = 49/173 (28%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSD------ 255
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+MS F MD D +Q++YG+ GS
Sbjct: 256 -------------IMSPFYQ---WMDTENFVLP---DDDRRGIQQLYGSKSGS 289
>gi|332706689|ref|ZP_08426750.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332354573|gb|EGJ34052.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 445
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 26/185 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-------------- 245
Y+I V S + D + +D TLI G N L
Sbjct: 236 TVSAGTTYQIAVDGFSSTTG--LIDLNINLDIDDTLISGTSNDDTLFGTVENDQIEGLAG 293
Query: 246 -----NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+E +++ G + N I + ++ + G SGND + + NN F +G+D+
Sbjct: 294 NDTIFGSEGINTLLGGDGNDLIYGGSQLDVIRGGSGNDTIFASEGNNEIFGDAGDDIIYS 353
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SG D + + + E+ I++ N + + D+ + Q S
Sbjct: 354 GSGNDFINSGSGNDTLWLGGGEDLIVLESGNGFDT-----INNFQLGLTTFDAGDSDQLS 408
Query: 361 ILEYT 365
I++
Sbjct: 409 IVDGA 413
>gi|332240134|ref|XP_003269245.1| PREDICTED: matrix metalloproteinase-25 [Nomascus leucogenys]
Length = 567
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 67/213 (31%), Gaps = 56/213 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFE 71
+ L W + ++ ++L+ QE R +AL W LTF
Sbjct: 113 YALSGSVWKKRTLTWRVRSFPQS------SQLS---QETVRVLLSYALMAWGMESGLTFH 163
Query: 72 ETSIHS----DI------KFISSNNGYVCTPRYDSRYF--------MEINFDKADVWRYG 113
E DI F + + + F + +FD + W +G
Sbjct: 164 EVDSPQGQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHFDDEETWTFG 223
Query: 114 I--GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+GT L A+HE GHALGL H + N S+M F
Sbjct: 224 SKDSEGTDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQGPV 264
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D +Q++YG + +
Sbjct: 265 GDPDKYRLSQ----DDRDGLQQLYGKAPQTPYD 293
>gi|221634560|ref|YP_002523248.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
gi|221163433|gb|ACM04395.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
Length = 313
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 59/206 (28%), Gaps = 22/206 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG---------VKNYIDLNTESW 250
G GN+ ++I +Y G D LDL+ D E +
Sbjct: 82 GQAGNDTFRIRGVDLADD----VYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPF 137
Query: 251 SS--------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ G + + + E++ G GND + G +V G D G +
Sbjct: 138 GPYVVKSIEIVKGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGT 197
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D A + ++E ++V A +R FA +
Sbjct: 198 GNDLLVGGAGNDRLD-GQWERDVLVGGAGNDILIGGGGADRFVFAGNFGRDRIRDFSPDM 256
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYE 388
E + I H E
Sbjct: 257 EGERIDLRGVGAITGFGDLMANHLSE 282
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 5/104 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+AQ + ++ G+ GND++ G + GND +G G+D + L +
Sbjct: 17 LAQSALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFY 76
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+A + D + + AD + YT
Sbjct: 77 HDACY----GQAGNDTFR-IRGVDLADDVYGGAGTDTLDLSGYT 115
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 52/176 (29%), Gaps = 40/176 (22%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF------------------FESSGND 296
G N + + +VG GND + G + + +GND
Sbjct: 28 GTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDACYGQAGND 87
Query: 297 VF-----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVER 343
F G +G DT + L +R + A YD + +E
Sbjct: 88 TFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEI 147
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
++ + + + + L + L G DV M EG D F
Sbjct: 148 VKGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGM---------EGADALF 194
>gi|170739301|ref|YP_001767956.1| peptidase M10A and M12B matrixin and adamalysin [Methylobacterium
sp. 4-46]
gi|168193575|gb|ACA15522.1| peptidase M10A and M12B matrixin and adamalysin [Methylobacterium
sp. 4-46]
Length = 470
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 81/246 (32%), Gaps = 52/246 (21%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
+ D++L W ++T + P Q A +WS+ ++ F++
Sbjct: 1 MVDYVLEGPRWGGGSYGSSGGIVTWSVDNTVPGSFAPVIQA----AFSKWSQYGNIRFQQ 56
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEIN----------FDKADVWRYGIGK-----G 117
+ S+N R + + FD + W G G
Sbjct: 57 VDHMAGANIAISDNYIDGLDRILGQTNYTFSGQNFQSATIQFDSGEHWTASNGSILSSDG 116
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L ALHEIGHA+G+ H Y+ VM ++ +++S
Sbjct: 117 FNLYDVALHEIGHAIGIGH---YDASPA----------------VM------NTFLNSS- 150
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
P+ SDI A++ +YGA + +D+ G ++ L+G
Sbjct: 151 --VTNPVTSDIDAIRALYGAALTTTTRLGGDFNSDGTTDVLW---HDTAGH--INAWLLG 203
Query: 238 GVKNYI 243
I
Sbjct: 204 SNGQII 209
>gi|167646084|ref|YP_001683747.1| hemolysin-type calcium-binding region [Caulobacter sp. K31]
gi|167348514|gb|ABZ71249.1| Hemolysin-type calcium-binding region [Caulobacter sp. K31]
Length = 368
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 13/194 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G++I + S GG+D + +G + L + I G
Sbjct: 5 NGTSGDDIVYLGTTLTPSNIYDA---RGGNDYV----VGSAGANLILGGDGDDIIDGRGG 57
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I + V G +G+D++ G++ +V +G D+ G +G DTF ++A +
Sbjct: 58 SDVIFGGAGNDVVFGGNGSDLLFGDAGADVVRGGAGVDIVSGGAGNDTFVFHAG-DVSST 116
Query: 319 YRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ + + DV E F+ D +
Sbjct: 117 SLLPDMVLDFRGAGNTTGAEQDVLELHGFSAGSTLDFVGNVGDATHQLYKINDAVDSSAS 176
Query: 378 D----VFESMKHFY 387
+S H
Sbjct: 177 GYVLINTDSAAHLN 190
>gi|74138140|dbj|BAE28570.1| unnamed protein product [Mus musculus]
Length = 479
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 57/192 (29%), Gaps = 44/192 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI-- 79
W I Y+ T + AL W +V LTF S +DI
Sbjct: 111 WRKSHITYRIVNYTPDLPRQSV-------DSAIEKALKVWEEVTPLTFSRISEGEADIMI 163
Query: 80 KFISSNNGYVCTPRYDSRYF-------MEINFD---KADVWRYGIGKGTILSHNALHEIG 129
F +G IN D D R GT L A HE+G
Sbjct: 164 SFAVGEHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERRTEDVTGTNLFLVAAHELG 223
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H+LGL H +M Y + + S + F D+
Sbjct: 224 HSLGLYHSAKAEA-------------------LM-YPVYKSSTDLSRFHLSQ----DDVD 259
Query: 190 AVQKIYGAPKGS 201
+Q +YG P S
Sbjct: 260 GIQSLYGTPTAS 271
>gi|218709233|ref|YP_002416854.1| hypothetical protein VS_1240 [Vibrio splendidus LGP32]
gi|218322252|emb|CAV18376.1| Conserved hypothetical protein; putative hemolysin-type
calcium-binding region [Vibrio splendidus LGP32]
Length = 5042
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 12/150 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG--------GVKNYIDLNTESWS 251
+G ++ D+ + + D+ G L + + IDLN S
Sbjct: 4809 TDVGGGVWIATADAIDTVKVVGLSDTPGSYTLKVEAVSEELDNSDTATSASIDLNLNIVS 4868
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + ++ V ++ +GN + S N+ SG+D G G DT
Sbjct: 4869 N--GVDIDLATETDDV--QLLAGAGNIDLTAGSGNDRLEGGSGDDTLVGGDGNDTLIGGG 4924
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
S + ++ + ++ + +D ++D
Sbjct: 4925 GSDILTGGDGMDSFVWFNIEDGVEDTITDF 4954
>gi|126726453|ref|ZP_01742294.1| calcium binding hemolysin protein, putative [Rhodobacterales
bacterium HTCC2150]
gi|126704316|gb|EBA03408.1| calcium binding hemolysin protein, putative [Rhodobacterales
bacterium HTCC2150]
Length = 1097
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 52/163 (31%), Gaps = 3/163 (1%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T+ G + + + G N ++ + V G GND+ G +V + +
Sbjct: 774 TVNGEAGQDLVFGGSGFDHLFGGSGNDSLYGGEDTDEVNGGRGNDLAFGGFGADVVYGET 833
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND G+ G D F A + + D +D ++L +
Sbjct: 834 GNDTLSGNEGADQLFGGAGRDQL-FGDEGEDQLFGGSGNDVMDGGADADQLEGGNGNDVL 892
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
L+ + + L G D+ K + G E
Sbjct: 893 DGGAGADQLDGGSGNDTLSGKEGSDMLLGGRGKDLLQGGSGED 935
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 47/145 (32%), Gaps = 12/145 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ + ++ G G D++ G ++ F +GND G +G D A
Sbjct: 153 LFGGTGNDTLDGGSQNDAAYGGFGTDLLYGADGDDSLFGGTGNDAVLGGTGRDVLMGEAG 212
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + A D L E L + D +N + Y + +D
Sbjct: 213 ADML----YGGADADALRGGTGNDLLQGDEGDDLLRGEDGEDILNAGLGHDVAYGGTADD 268
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGR 395
I + G E
Sbjct: 269 KI------NLHEGNDYAVGGAGEDT 287
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 40/138 (28%), Gaps = 5/138 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS-IGGYEKNMTIAQ 264
+ G+D L G + L S + G N +
Sbjct: 889 NDVLDGGAGADQLDGGSGNDTLSGKEGSDMLLGGRGKDLLQGGSGEDFLSGNSGNDELHG 948
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + G GND + G++ + +G D G SG D A + +
Sbjct: 949 GSDNDQINGDQGNDTLHGDAGADTISGGAGKDTIFGGSGDDLIEAGAGQNMISGGAGADT 1008
Query: 325 IIVYDANEHKQDFLSDVE 342
+ N D + D
Sbjct: 1009 FVFLSDNGSHHDTVLDFN 1026
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 7/176 (3%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+Y G+D L + G + G E + + + + G +
Sbjct: 825 GADVVYGETGNDTL--SGNEGADQLF--GGAGRDQLFGDEGEDQLFGGSGNDVMDGGADA 880
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G + N+V +G D DG SG DT S + R ++ + +
Sbjct: 881 DQLEGGNGNDVLDGGAGADQLDGGSGNDTLSGKEGSDMLLGGRGKDLLQGGSGEDFLSGN 940
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGL 391
+ E +D + + + L A + + G+D S E G
Sbjct: 941 SGNDELHGGSDNDQINGDQGNDT-LHGDAGADTISGGAGKDTIFGGSGDDLIEAGA 995
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 20/170 (11%), Positives = 54/170 (31%), Gaps = 6/170 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVV 280
++ G+D++D L + + + G + + +++ G G+D++
Sbjct: 865 LFGGSGNDVMDGGADADQ-----LEGGNGNDVLDGGAGADQLDGGSGNDTLSGKEGSDML 919
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G ++ SG D G+SG D + + + + + +
Sbjct: 920 LGGRGKDLLQGGSGEDFLSGNSGNDELHGGSDNDQINGDQGNDTLHGDAGADTISGGAGK 979
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + Q I + + +++ F +G
Sbjct: 980 DTIFGGSGDDLIEAGAGQNMISGGAGADTFVFLSDNGSHHDTVLDFNCYG 1029
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 52/187 (27%), Gaps = 27/187 (14%)
Query: 206 IYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
IY + T++ GGDD++ + S + G + ++
Sbjct: 5 IYGTSQNDDLNGGAGKDTVFAKGGDDIISTS-------------GSQDKVFGSGGSDLVS 51
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS------------SGLDTFFYYA 311
+ +G+D V G+ ++ + SG+DV G G+D +
Sbjct: 52 LGGDEDRAYAGTGDDTVNGDYGSDRIYGGSGDDVLFGGDVLTSNAPAQGTGGIDDQIWGG 111
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ N + + + + L+ + +
Sbjct: 112 SGTDEIHGQSGNDRLFGQRDSDVIYGQEGTDYVHGGLDTDQLFGGTGNDTLDGGSQNDAA 171
Query: 372 IQVIGQD 378
G D
Sbjct: 172 YGGFGTD 178
Score = 40.5 bits (93), Expect = 0.83, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G + +D + + N+ +G D DG G D + + + ++ +
Sbjct: 259 DVAYGGTADDKINLHEGNDYAVGGAGEDTLDGGIGNDVIYGDKLPDNL-LAGEDTSVGLS 317
Query: 329 DANEHKQDF 337
A D+
Sbjct: 318 VAQFEGADW 326
>gi|310816770|ref|YP_003964734.1| hypothetical protein EIO_2343 [Ketogulonicigenium vulgare Y25]
gi|308755505|gb|ADO43434.1| hypothetical protein EIO_2343 [Ketogulonicigenium vulgare Y25]
Length = 518
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 44/137 (32%), Gaps = 16/137 (11%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y A H+ T G +G +P F Y A + D A
Sbjct: 3 FDEVFYRKQ-------TRLGLRATEEHFNTAGDAKGFDPTPYFSTSYYKARYPD---WQA 52
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ G D Y +Y DLR++ H++ HG E
Sbjct: 53 GGAQTAIEDMVNRMRRGEARQPHPLIDPAYYRETYPDLRSLNADAYF----HFVKHGDHE 108
Query: 518 GRNPDA-FKALEYIASH 533
R+P A F A Y ++
Sbjct: 109 QRSPSADFDAHFYANTY 125
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 10/125 (8%)
Query: 502 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
A H+ T G +G +P F Y A + D A + G
Sbjct: 15 GLRATEEHFNTAGDAKGFDPTPYFSTSYYKARYPDWQAGGAQT---AIEDMVNRMRRGEA 71
Query: 561 EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG--ISGMQFKSVMNL 618
+P Y +Y DL ++ + A H++ HG E R+ + + L
Sbjct: 72 RQPHPLIDPAYYRETYPDLRSL----NADAYFHFVKHGDHEQRSPSADFDAHFYANTYLL 127
Query: 619 SEKSR 623
E+ R
Sbjct: 128 PEQPR 132
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 5/109 (4%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E A S Y A Y D Q E M + G + D
Sbjct: 21 EHFNTAGDAKGFDPTPYFSTSYYKARYPDWQAGGAQTAIEDMVNRMRRGEARQPHPLIDP 80
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH 449
Y +Y DLR++ A H++ HG E R+P A F A Y ++
Sbjct: 81 AYYRETYPDLRSLNAD----AYFHFVKHGDHEQRSPSADFDAHFYANTY 125
>gi|224063802|ref|XP_002195237.1| PREDICTED: matrix metallopeptidase 15 (membrane-inserted)
[Taeniopygia guttata]
Length = 557
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 66/210 (31%), Gaps = 56/210 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS- 74
+ L + WS + + T + ++ E R A W + L F E +
Sbjct: 119 YALTGRRWSQSHLTFSIQNYTEKLGRY-------HSHEAVRRAFRVWEQATPLVFREVAY 171
Query: 75 --------IHSDIK------FISSNNGYVCTPRY-DSRYFM------EINFDKADVWR-- 111
+DI F ++ + + YF + +FD + W
Sbjct: 172 EDIRQKRKKEADIMVLFASGFHGDSSPFDGLGGFLAHAYFPGPGMGGDTHFDLDEPWTLE 231
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GH+LGL H + + +M+ F
Sbjct: 232 NADVSGNNLFLVAVHELGHSLGLEHSSNPSA-------------------IMAPFYQWMD 272
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ D+ +Q++YG G
Sbjct: 273 TENFQ------LPEDDLKGIQQLYGTADGH 296
>gi|152993318|ref|YP_001359039.1| glycosyl transferase [Sulfurovum sp. NBC37-1]
gi|151425179|dbj|BAF72682.1| glycosyl transferase [Sulfurovum sp. NBC37-1]
Length = 1335
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 37/111 (33%), Gaps = 14/111 (12%)
Query: 399 FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKE----GRNPDA----FKALEYIASH 449
FD YL D+ D A H+I G E GR FK Y+ ++
Sbjct: 668 FDEADYLEVNPDVATAVERGDFLNATDHFIWFGRNEVENGGRRIGMEFPYFKEQIYLLNN 727
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEE---GRFVTFDSYLYLGSYDDLRN 497
DL A PD HF FG EE G + Y L +
Sbjct: 728 PDLQKAKEYQPDF--PLFWHFLEFGYEEMLKGIRPFPKALSYRYERPVLSS 776
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 483 FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKE----GRNPDA----FKALEYIASH 533
FD YL D+ D A H+I G E GR FK Y+ ++
Sbjct: 668 FDEADYLEVNPDVATAVERGDFLNATDHFIWFGRNEVENGGRRIGMEFPYFKEQIYLLNN 727
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEE 561
DL A PD HF FGYEE
Sbjct: 728 PDLQKAKEYQPDF--PLFWHFLEFGYEE 753
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 31/90 (34%), Gaps = 12/90 (13%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE----GRSIT-----FNPDLY 572
+ F +Y+ + D+ A DHF FG E GR I F +Y
Sbjct: 666 EIFDEADYLEVNPDVATAVERGD--FLNATDHFIWFGRNEVENGGRRIGMEFPYFKEQIY 723
Query: 573 LTSYDDLWNVFGSDRSAAAQ-HYITHGMKE 601
L + DL H++ G +E
Sbjct: 724 LLNNPDLQKAKEYQPDFPLFWHFLEFGYEE 753
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 11/82 (13%)
Query: 363 EYTASYEDLIQVIGQ-DVFESMKHFYEFGLSE----GRD-----ITFDSYLYLGSYDDLR 412
+Y D+ + + D + HF FG +E GR F +YL + DL+
Sbjct: 672 DYLEVNPDVATAVERGDFLNATDHFIWFGRNEVENGGRRIGMEFPYFKEQIYLLNNPDLQ 731
Query: 413 NVFGSDRGAAAR-HYITHGVKE 433
H++ G +E
Sbjct: 732 KAKEYQPDFPLFWHFLEFGYEE 753
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 5/74 (6%)
Query: 567 FNPDLYLTSYDDLWNVF-GSDRSAAAQHYITHGMKE----GRALGISGMQFKSVMNLSEK 621
F+ YL D+ D A H+I G E GR +G+ FK + L
Sbjct: 668 FDEADYLEVNPDVATAVERGDFLNATDHFIWFGRNEVENGGRRIGMEFPYFKEQIYLLNN 727
Query: 622 SRDKADLSLSFDHK 635
+ D
Sbjct: 728 PDLQKAKEYQPDFP 741
>gi|114652045|ref|XP_001157623.1| PREDICTED: matrix metalloproteinase 14 isoform 3 [Pan troglodytes]
Length = 600
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|185132700|ref|NP_001116994.1| matrix metalloproteinase 13 [Salmo salar]
gi|8247750|dbj|BAA96416.1| matrix metalloproteinase 13 [Salmo salar]
Length = 462
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 57/202 (28%), Gaps = 49/202 (24%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-- 72
+H D W + ++ T D+ R L WS V L F++
Sbjct: 97 NHFPNDLKWKTTEVTFRILNYTPDLRKADV-------DRAVRNGLNVWSSVTPLKFKKLY 149
Query: 73 -----------TSIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTIL 120
H D +G + + +FD+ + W L
Sbjct: 150 EGNADIMISFGAREHGDFNPFDGPDGLLAHAYPPGNGIGGDTHFDEDETWTKDF-HEFNL 208
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
A HE GHALG+ H S + V SY GY
Sbjct: 209 FLVAAHEFGHALGMAHSSDPG---------------SLMYPVYSY----------GKGYP 243
Query: 181 ATPMVSDIVAVQKIYGAPKGSL 202
+ DI +Q +YG
Sbjct: 244 LS--EDDIKGIQSLYGENPNHR 263
>gi|327269124|ref|XP_003219345.1| PREDICTED: macrophage metalloelastase-like [Anolis carolinensis]
Length = 268
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 44/183 (24%)
Query: 32 PDVLTTHRLSFDITELNPNAQ-----EVARWALGEWSKVVDLTFEETSIHSDIKFIS--- 83
P + L++ I P+ EV A WS V L F T +DI+
Sbjct: 97 PAKWGKNVLTYRINNYTPDMHPAKVHEVIAKAFKVWSDVTPLQFRYTRRPADIEISFAYG 156
Query: 84 ---SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
N + + F + +FD+++ W GK L A+HE GH+LG
Sbjct: 157 DHRDGNPFDGRGGTLAHAFFPAPNLGGDAHFDESEYWS-EFGKEANLFIVAVHEFGHSLG 215
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S+ ++ P + D+ +Q+
Sbjct: 216 LEHSNVRGA---------------VMYSIYTFTNPNTFRLSY----------DDVQRIQR 250
Query: 194 IYG 196
+YG
Sbjct: 251 LYG 253
>gi|254423046|ref|ZP_05036764.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196190535|gb|EDX85499.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 675
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGDD LIGG N + + ++ G N + + + G + ND +IG +
Sbjct: 530 GGDD--RDILIGGRSNDTLFGEQGFDTLSGGSGNDLLNGGNGKDILSGGADNDTLIGEAG 587
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ G D+ G +G DTF I F + ++ AN LS V
Sbjct: 588 KDTLIGDRGKDMLTGGAGEDTFVLALGEGTDTITDFSSEDLIGLANGLGIGELSFV 643
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D+L GG I + S ++ G + T++ + + + G +G D++ G +
Sbjct: 522 GNGKDVL----FGGDDRDILIGGRSNDTLFGEQGFDTLSGGSGNDLLNGGNGKDILSGGA 577
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
N+ +G D G G D A + + E + D + L++
Sbjct: 578 DNDTLIGEAGKDTLIGDRGKDMLTGGAGEDTFVLALGEGTDTITDFSSEDLIGLAN 633
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 1/108 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + ++G ND + G + SGND+ +G +G D A
Sbjct: 519 LEGGNGKDVLFGGDDRDILIGGRSNDTLFGEQGFDTLSGGSGNDLLNGGNGKDILSGGAD 578
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ I ++ D + + + A S
Sbjct: 579 NDTL-IGEAGKDTLIGDRGKDMLTGGAGEDTFVLALGEGTDTITDFSS 625
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 13/136 (9%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T +E + G +++ + ++F G +G D F
Sbjct: 481 GTPVEEALPG----TRYGTDWDDMLIGTRRKNIFFGQAGNDFLEGGNGKD----VLFGGD 532
Query: 325 IIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--V 379
D L + L + IL A + LI G+D +
Sbjct: 533 DRDILIGGRSNDTLFGEQGFDTLSGGSGNDLLNGGNGKDILSGGADNDTLIGEAGKDTLI 592
Query: 380 FESMKHFYEFGLSEGR 395
+ K G E
Sbjct: 593 GDRGKDMLTGGAGEDT 608
>gi|153818120|ref|ZP_01970787.1| hypothetical protein A5C_1650 [Vibrio cholerae NCTC 8457]
gi|126511306|gb|EAZ73900.1| hypothetical protein A5C_1650 [Vibrio cholerae NCTC 8457]
Length = 1511
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 1208 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 1262
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 1263 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 1322
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 1323 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 1382
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 1383 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 1435
>gi|254415630|ref|ZP_05029389.1| Cna protein B-type domain [Microcoleus chthonoplastes PCC 7420]
gi|196177580|gb|EDX72585.1| Cna protein B-type domain [Microcoleus chthonoplastes PCC 7420]
Length = 1344
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 24/213 (11%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+N +G Y ++ + F +MDA Y + ++ D + G
Sbjct: 1078 DFNRFTGSFGSQTGYGTFTYQFTESGIFTIGVGLMDAGDSYVDSGLLIDNFSFTPNSGTN 1137
Query: 199 KGSL--GNNI------YKIEVQQKDSPFIQT------IYDSGGDDLL-----DLTLIGGV 239
G + Y I+ + + + I+ G+D + D + G
Sbjct: 1138 LGLSIPNGTVEAVTPEYTIQGTPDNDKLVSSNQQDEFIFADAGNDTVIGSLGDDVIYGAE 1197
Query: 240 KNYI---DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ I DLN + + + + + G GND + G N+ + + G+D
Sbjct: 1198 GDDILRGDLNKGCLN--CAIAGDDILYGGAGNDRLYGKGGNDQLFGEDGNDKIWGNDGDD 1255
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G G D + + + E + D
Sbjct: 1256 LLWGGLGNDQLIGGQGNDTFVLAVSEGIDKIRD 1288
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 21/227 (9%)
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSG 226
Q S D F + ++S++ + GS G+ Y Q I TI
Sbjct: 1052 NQSSFSDFGFVSITSGVLSELADTSSDFNRFTGSFGSQTGYGTFTYQFTESGIFTI---- 1107
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI---------------ESV 271
G L+D V + + ++ S++ G ++I TV + V
Sbjct: 1108 GVGLMD-AGDSYVDSGLLIDNFSFTPNSGTNLGLSIPNGTVEAVTPEYTIQGTPDNDKLV 1166
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ ++ + ++ N+ S G+DV G+ G D + I+ A
Sbjct: 1167 SSNQQDEFIFADAGNDTVIGSLGDDVIYGAEGDDILRGDLNKGCLNCAIAGDDILYGGAG 1226
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++L D +L + LI G D
Sbjct: 1227 NDRLYGKGGNDQLFGEDGNDKIWGNDGDDLLWGGLGNDQLIGGQGND 1273
>gi|158424950|ref|YP_001526242.1| calcium binding protein [Azorhizobium caulinodans ORS 571]
gi|158331839|dbj|BAF89324.1| Calcium binding protein [Azorhizobium caulinodans ORS 571]
Length = 219
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESV 271
T+Y GDD L D L GG + L+ S S + G E N T+ +++
Sbjct: 45 GADTLYGDAGDDSLFGNSGDDALFGGAGHDF-LSGGSGSDYLSGGEGNDTLLGGAGDDAL 103
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG +G+D + G + +++ +GND+ G +G D F + + F+ + + +
Sbjct: 104 VGGAGDDFLSGGAGDDILHGGAGNDLLQGGAGSDLFVFTGGGGNDVVLDFKAGTDLLEIS 163
Query: 332 EHKQDF 337
+
Sbjct: 164 KGINGT 169
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 22/164 (13%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ S F I+ GGDD + + G ++ +H
Sbjct: 9 FDDTLLGSRFHDVIFAHGGDDTV---------------------LAGDGHDLVFGEH-GA 46
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +G+D + GNS ++ F +G+D G SG D + ++A++
Sbjct: 47 DTLYGDAGDDSLFGNSGDDALFGGAGHDFLSGGSGSDYLSGGEGNDTLLGGAGDDALVGG 106
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ D A + + D++
Sbjct: 107 AGDDFLSGGAGDDILHGGAGNDLLQGGAGSDLFVFTGGGGNDVV 150
Score = 44.7 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 7/127 (5%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI ++++GS +DV+ + ++ G+D+ G G DT + A
Sbjct: 3 TIEGSAFDDTLLGSRFHDVIFAHGGDDTVLAGDGHDLVFGEHGADTLYGDAGDDSL---- 58
Query: 321 FENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
F N+ DFLS + L + + L A + L G
Sbjct: 59 FGNSGDDALFGGAGHDFLSGGSGSDYLSGGEGNDTLLGGAGDDALVGGAGDDFLSGGAGD 118
Query: 378 DVFESMK 384
D+
Sbjct: 119 DILHGGA 125
>gi|149912602|ref|ZP_01901136.1| RTX toxins and related Ca2+-binding proteins-like protein
[Roseobacter sp. AzwK-3b]
gi|149813008|gb|EDM72834.1| RTX toxins and related Ca2+-binding proteins-like protein
[Roseobacter sp. AzwK-3b]
Length = 616
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 56/143 (39%), Gaps = 6/143 (4%)
Query: 198 PKGSLGNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
P + + + + S I+ G D + +GG + + + + G
Sbjct: 322 PMQAARDITFGLSTDDDLSGTDAHDLIHAGDGADTV----LGGAGDDLLIGAAGDDILTG 377
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N +A +++ G G+D++ G + +++ ++ +G D+ G +G DT A
Sbjct: 378 GSGNDRLAGEQGNDTLDGGMGDDILTGGAGDDILWDGTGADLLFGDAGNDTIHLAADDAA 437
Query: 316 YKIYRFENAIIVYDANEHKQDFL 338
++ + + + +Q +
Sbjct: 438 DTVHGGDGIDTLDLSTTGQQAHI 460
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 42/108 (38%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + I ++V+G +G+D++IG + +++ SGND G G DT
Sbjct: 338 DLSGTDAHDLIHAGDGADTVLGGAGDDLLIGAAGDDILTGGSGNDRLAGEQGNDTLDGGM 397
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ ++ + + + AD D+V+
Sbjct: 398 GDDILTGGAGDDILWDGTGADLLFGDAGNDTIHLAADDAADTVHGGDG 445
>gi|104782921|ref|YP_609419.1| RTX toxin [Pseudomonas entomophila L48]
gi|95111908|emb|CAK16632.1| putative RTX toxin [Pseudomonas entomophila L48]
Length = 2350
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 71/220 (32%), Gaps = 22/220 (10%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD----DLLDLTLI--GGVKNY 242
+ +Y + N + + + Y + + D ++ G
Sbjct: 2030 ASHDGVYSIHLVNTDNATGNSKAAENYKLSLVVDYSNAVNEVVHDTYTVSDGHGGSATGN 2089
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+D+ + + G + + + ++ G +GNDV++ + N+ + GND+
Sbjct: 2090 VDITYQPGHVLDGTAGDDVLLAGSGDNTLNGGAGNDVLVAGTGNDHLYGGEGNDLLIAGP 2149
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-------DFLSDVERLRFADQCIDSVN 355
G D S + ++V + Q D L+ +E L ++ +
Sbjct: 2150 GNDLLDGGPGSDTVSFAKAGAGVVVDLGHAGAQNTVGAGVDTLTSIENLIGSEYNDTLIG 2209
Query: 356 VKQRSILEYTA---------SYEDLIQVIGQDVFESMKHF 386
++L A + + G +++ F
Sbjct: 2210 NGGDNVLTGGAGDDTLTGGGGNDTFVWQKGDSGHDTVTDF 2249
>gi|17549401|ref|NP_522741.1| putative hemagglutinin/hemolysin-related protein [Ralstonia
solanacearum GMI1000]
gi|17431654|emb|CAD18331.1| probable hemagglutinin/hemolysin-related protein [Ralstonia
solanacearum GMI1000]
Length = 4106
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 9/151 (5%)
Query: 228 DDLLDLTLIGGVKNYID---LNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D L+ ++ L T S+I G N T+ + + + G +G+D +
Sbjct: 3885 TDSTSLSSTANAGQLLNVSLLGTTQPSAIIEGTSGNNTLTGTSGNDRLYGYAGDDTLNAG 3944
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-----VYDANEHKQDFL 338
+ N++ +GNDV +G G D A + + + + + D +
Sbjct: 3945 AGNDLLRGGAGNDVLNGGDGNDILIGGAGNDTLTGGAGGDIFLWEVNAADNTGGNGADTI 4004
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+D D ++ YTA +
Sbjct: 4005 TDFTLASGPDDATADRIDVSALLVGYTADAD 4035
>gi|301781262|ref|XP_002926043.1| PREDICTED: matrix metalloproteinase-14-like [Ailuropoda
melanoleuca]
Length = 582
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 141 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 200
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTVRNEDVNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 260
Query: 149 VDNDYEN 155
D EN
Sbjct: 261 QWMDTEN 267
>gi|325981731|ref|YP_004294133.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
gi|325531250|gb|ADZ25971.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
Length = 335
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 10/148 (6%)
Query: 200 GSLGNNIYKIEV---------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
GS G++ Y + + + +I + G +L +LTL GV + +
Sbjct: 99 GSTGDDTYWVNSFGDVVAEISNNGNDTVVSSISYTLGANLENLTL-SGVTAIFGIGNAAD 157
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I G E I + + G G D ++G++ +N GND+ G +G DT+ +
Sbjct: 158 NQIAGGESANIIWGRAGNDMLSGKGGADTLLGDTGDNSLDGGVGNDLLIGGTGTDTYSFG 217
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL 338
I + A+ V D + D +
Sbjct: 218 RGYGKDIIVENDPALGVLDTVKFLSDII 245
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 62/167 (37%), Gaps = 12/167 (7%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ ++I K+ +L I ++T + +++ G +GND + G + N+
Sbjct: 18 NTSGKFSVIVTAKDTGNLTISDSFDINVSSLDITANGTSGADTLNGGNGNDTLNGLAGND 77
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL--------- 338
V ++GND DG SG+D Y + F + +V + + + D +
Sbjct: 78 VLNGNAGNDWLDGGSGIDRMDGSTGDDTYWVNSFGD--VVAEISNNGNDTVVSSISYTLG 135
Query: 339 SDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+++E L + + + S + G D+
Sbjct: 136 ANLENLTLSGVTAIFGIGNAADNQIAGGESANIIWGRAGNDMLSGKG 182
>gi|325982254|ref|YP_004294656.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
gi|325531773|gb|ADZ26494.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
Length = 1804
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 16/159 (10%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + SG L G+ +++ I T +++
Sbjct: 1262 TAVTITTVNALVASGATLTLSNAANSGIL--------AFNGAAETNGLFNIIGGTGNDNI 1313
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----IIV 327
+G SGNDV+ G ++ GND G +G D+F + A S L +
Sbjct: 1314 IGGSGNDVLTGGDGSDSITAGLGNDALSGGTGDDSFTFAAGSGLTSADSVNGGEGTDTVA 1373
Query: 328 YDANEHKQ----DFLSDVERLRFADQCIDSVNVKQRSIL 362
N D +S++E + A+ + +++
Sbjct: 1374 LTGNTAVAATNFDNVSNIEAITVANTTGAVAITTKDTLV 1412
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 30/73 (41%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+++ + TI T +++ G + ND + G + N+ +GND +G D+
Sbjct: 1553 TFNGSAETDGAFTITGGTGSDNITGGAQNDTLAGGAGNDTLSGGTGNDSITSGAGTDSIT 1612
Query: 309 YYAPSYLYKIYRF 321
A + +
Sbjct: 1613 GSAGADTISLGSS 1625
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 65/214 (30%), Gaps = 33/214 (15%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLL------DLTLIGGVKNYIDL------ 245
G GN+ + + I D G G D + D T N ++
Sbjct: 1080 SGGAGNDTLRFAAVSGLT--HADIVDGGTGTDTVALTGNTDFTASTDFDNVRNIEVITLG 1137
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSS-----------GNDVVIGNSANNVFFESSG 294
NT + +I + + + + + S G + G + N++ SG
Sbjct: 1138 NTSTAVTITTQDALVAVGATLTLTNAANSGVLTFNGSAETDGAFTITGGTGNDLITAGSG 1197
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-------LSDVERLRFA 347
N+ G +G D+F + A + L +S++E +
Sbjct: 1198 NNTLSGGNGDDSFIFAAGTGLTTDTVNGGTGTDTVTLTGTTVVTATQFNNVSNIEVIALP 1257
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D +V + + L + + L +
Sbjct: 1258 DMVNTAVTITTVNALVASGATLTLSNAANSGILA 1291
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 58/195 (29%), Gaps = 33/195 (16%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-----KNYIDLNTESWSSIG 254
G++ + + ++ G D + LT V N ++ + ++
Sbjct: 959 TGTGDDSFTFAAGSGLTS-ADSVNGGEGTDTVALTGNTAVAATNFDNVSNIEAITVANTT 1017
Query: 255 G----YEKNMTIAQHTVIESVVGSSGNDVVIGNSA--------------NNVFFESSGND 296
G K+ +A V+ S ++ N A N+ G+D
Sbjct: 1018 GAVAITTKDTLVAAGAVLALQASSLTTGILTFNGAAETDGTFTITGGGGNDSITAGLGDD 1077
Query: 297 VFDGSSGLDTFFYYAPSYLY--KIYRFENAIIVYDANEHKQ-------DFLSDVERLRFA 347
G +G DT + A S L I + D + ++E +
Sbjct: 1078 TLSGGAGNDTLRFAAVSGLTHADIVDGGTGTDTVALTGNTDFTASTDFDNVRNIEVITLG 1137
Query: 348 DQCIDSVNVKQRSIL 362
+ Q +++
Sbjct: 1138 NTSTAVTITTQDALV 1152
Score = 44.3 bits (103), Expect = 0.072, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 59/196 (30%), Gaps = 33/196 (16%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-----KNYIDLNTESWSSI 253
G G++ + + ++ G D + LT V N ++ + ++
Sbjct: 1341 SGGTGDDSFTFAAGSGLTS-ADSVNGGEGTDTVALTGNTAVAATNFDNVSNIEAITVANT 1399
Query: 254 GG----YEKNMTIAQHTVIESVVGSSGNDVVIGNSA--------------NNVFFESSGN 295
G K+ +A V+ S ++ N A N+ G+
Sbjct: 1400 TGAVAITTKDTLVAAGAVLALQASSLTTGILTFNGAAETDGTFTITGGGGNDSITAGLGD 1459
Query: 296 DVFDGSSGLDTFFYYAPSYLY--KIYRFENAIIVYDANEHKQ-------DFLSDVERLRF 346
D G +G DT + A S L I + D + ++E +
Sbjct: 1460 DTLSGGAGNDTLRFAAVSGLTHADIVDGGTGTDTVALTGNTDFTASTDFDNVRNIEVITL 1519
Query: 347 ADQCIDSVNVKQRSIL 362
+ Q +++
Sbjct: 1520 GNTSTAVTITTQDALV 1535
>gi|298293734|ref|YP_003695673.1| glycosyl transferase family 2 [Starkeya novella DSM 506]
gi|296930245|gb|ADH91054.1| glycosyl transferase family 2 [Starkeya novella DSM 506]
Length = 702
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 15/87 (17%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD----AFKALEYIASHEDLIN 454
F+ YL +Y D+ + A HY+ HG EGR P F Y++++ D+
Sbjct: 451 FERDWYLSAYADV----AASGMDAEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANPDVAA 506
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ D H+ G EGR
Sbjct: 507 SGMDP-------FLHYCAHGKAEGRHF 526
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 13/77 (16%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSD 418
Y ++Y D+ ++ +H+ G EGR + FD YL + D+ +
Sbjct: 456 YLSAYADVAA----SGMDAEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANPDV----AAS 507
Query: 419 RGAAARHYITHGVKEGR 435
HY HG EGR
Sbjct: 508 GMDPFLHYCAHGKAEGR 524
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 16/97 (16%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-----FNPDLYLTSYD 577
F+ Y++++ D+ + DA + H+ G EGR + F+ YL++
Sbjct: 450 GFERDWYLSAYADVAASGMDAEE-------HYLRHGKGEGRFPSRAAAEFDRGGYLSANP 502
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
D+ HY HG EGR G Q
Sbjct: 503 DVAASGMD----PFLHYCAHGKAEGRHFARIGGQGSP 535
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 15/92 (16%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA----FKALEYIASHED 535
F+ YL +Y D+ G D A HY+ HG EGR P F Y++++ D
Sbjct: 448 AFGFERDWYLSAYADV-AASGMD---AEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANPD 503
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ + D H+ G EGR
Sbjct: 504 VAASGMDP-------FLHYCAHGKAEGRHFAR 528
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 16/85 (18%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-----FDSYLYLGSYDD 494
F+ Y++++ D+ + D ++H+ G EGRF + FD YL + D
Sbjct: 451 FERDWYLSAYADVAASGMD-------AEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANPD 503
Query: 495 LRNVFGSDRGAAARHYITHGVKEGR 519
+ G D HY HG EGR
Sbjct: 504 V-AASGMD---PFLHYCAHGKAEGR 524
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
+ F D YL++Y D+ A +HY+ HG EGR + +F LS
Sbjct: 448 AFGFERDWYLSAYADVAASGMD----AEEHYLRHGKGEGRFPSRAAAEFDRGGYLSAN 501
>gi|149716840|ref|XP_001498874.1| PREDICTED: similar to matrix metalloproteinase 27 [Equus caballus]
Length = 511
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 61/189 (32%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + L WSKV L F + S +DI
Sbjct: 106 WKKYNLTYRIMNYTPDMARADV-------DEAIQKGLEVWSKVTPLMFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRYDSRYFM--------------EINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKD-GVGFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +M P +D S Y + D
Sbjct: 218 FGHSLGLSHSNDPTA-------------------LM---FPNYVSLDPSK-YPLS--QDD 252
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 253 ISGIQSIYG 261
>gi|114647860|ref|XP_509485.2| PREDICTED: matrix metalloproteinase-17 [Pan troglodytes]
Length = 604
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSI-HSDIKFI 82
P LS+ + +P + R +AL WS + L F E + +DI+
Sbjct: 129 APTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQID 188
Query: 83 SS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALH 126
S N+GY + + +FD + W + G L A+H
Sbjct: 189 FSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 248
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 249 EFGHAIGLSH 258
>gi|329848063|ref|ZP_08263091.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843126|gb|EGF92695.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1435
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 73/234 (31%), Gaps = 16/234 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ Y + + + TL ++N I + + G N+ I
Sbjct: 685 GDDTYVVNSGDDQIAEAASQGTDQVNSSASFTLGANLENLILADGAAIDGTGNGRANV-I 743
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +G D + G + N+V +G D G SG DT+ A F+
Sbjct: 744 TGNESANRLEGGAGLDTLYGGAGNDVLSGGTGADSLSGGSGNDTYVVDASGEAIVEAVFQ 803
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR----------SILEYTASYEDLI 372
V +VE L + N +IL A + +
Sbjct: 804 GTDTVQ--ASVGHTLAINVENLELTGSGHINGNGNSAQNVLTGNSGNNILNGAAGNDTMA 861
Query: 373 QVIGQD--VFESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGAAA 423
G D V + EG D+ S Y L + ++ + G+
Sbjct: 862 GGAGDDTFVVANSGDVVTEAAGEGADVVQASINYTLSANVEILTLTGTANLTGT 915
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 83/254 (32%), Gaps = 40/254 (15%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ GNNI + T+ GDD + G V + +
Sbjct: 843 TGNSGNNI------LNGAAGNDTMAGGAGDDTFVVANSGDVVTE---AAGEGADVVQASI 893
Query: 259 NMTIAQHTVIESVVG-----SSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
N T++ + I ++ G +GND+ ++GN +N+ + GND G G DT
Sbjct: 894 NYTLSANVEILTLTGTANLTGTGNDLANGLVGNDGDNLLNGAGGNDALAGGLGNDTLLGG 953
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLRFADQCIDSVNVK---- 357
Y + +++ D + ++ E L FA N
Sbjct: 954 LGDDSYVVDVAGDSVTELAG--EGTDTVVAGLSHNLGANFENLMFAGTGNFVGNGNGLAN 1011
Query: 358 ------QRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDITFDSYLY-LGSYD 409
+ LE A + L +G D F EG D S Y LG+
Sbjct: 1012 AIVGNTGNNWLEGAAGNDTLTGGLGNDTFVVDADDIVAENAGEGTDWVLASRSYVLGANL 1071
Query: 410 DLRNVFGSDRGAAA 423
+ + GS A
Sbjct: 1072 ESLALSGSGNLTAT 1085
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 54/171 (31%), Gaps = 5/171 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-AQHTVI 268
+ I D G D L G + +T S G + N I A
Sbjct: 592 NDTLYANGLTSGIADGGAGDDLIFAYSGANGGSGN-DTIQSSGAQGGDGNDEITASGYSS 650
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G +GND + G+++ + G+D G G DT+ + + V
Sbjct: 651 GMLYGEAGNDTLTGSNSGDHLDGGLGDDQLAGGVGDDTYVVNSGDDQIAEAASQGTDQVN 710
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQD 378
+ +++E L AD +++ S L G D
Sbjct: 711 SSASFTLG--ANLENLILADGAAIDGTGNGRANVITGNESANRLEGGAGLD 759
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 53/180 (29%), Gaps = 8/180 (4%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIG- 254
SL N + + + GDD D L + + SS+
Sbjct: 1250 NSLNNTLTGTNGNNLLDGGAGMDKLVGGLGDDTYYVDNALDNVTELHFQGTDTIISSVTY 1309
Query: 255 ---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + + G+S + + GN +N GND G+ G D F +
Sbjct: 1310 SLLGRAVEIITLTGAGNINATGNSLGNTITGNDGSNRLDGGVGNDTLTGNLGADMFVFLT 1369
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S+ I F A + + + + ++ +AS D+
Sbjct: 1370 GSWKDTITDFSAAENDSINVNAYTAGVINTAMVTQMGADVLVNLGGGNTVTVLSASQADV 1429
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + T A + VG GND GN ++ SG+D+ +G +G D A
Sbjct: 377 NFTGTDNPDTYAGSEDSNTAVGKGGNDSFNGNGGSDELQGDSGSDLLNGGTGSDRLHAAA 436
Query: 312 PSYLYKIYRFENAIIVYDANEHK-QDFLSD 340
Y+ + N + D L+
Sbjct: 437 APGSYQTPWYNNTYSPPQLDRGSETDTLNG 466
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ SGN GN+ N +SGN++ DG G DT + Y I + +
Sbjct: 1075 ALSGSGNLTATGNAVANRIGGNSGNNLIDGQGGNDTLQGGLGNDTYVIDGAGDMVT 1130
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 62/199 (31%), Gaps = 25/199 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ S + + GDDL+ D+ G + + G + N I
Sbjct: 198 GDDTLYSYSNSWTSAHAGDGDDLIYAHSDVYGGAGNDTLMMTSGTHNGPGYGGDGNDEIV 257
Query: 264 QHTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-- 320
+ SV+ G+D+++GNSA ++ +GND G + ++Y S +Y
Sbjct: 258 GAQGVASVLLGEGGDDILLGNSAEDMLTGGAGNDSLTGGDNIPHYYYGTGSGDIAVYSGA 317
Query: 321 -------------FENAIIVYDANEHKQDFL-SDVERLRFADQCI----DSVNVKQRSIL 362
F + + + D L S +E L+F++ +
Sbjct: 318 VTDYQVTRDPDTQFVTVVDLRPDSPDGTDLLDSSIEALKFSNGTYLVDVVLAGANLGVLN 377
Query: 363 EYTASYEDLIQVIGQDVFE 381
D
Sbjct: 378 FTGTDNPDTYAGSEDSNTA 396
Score = 44.3 bits (103), Expect = 0.068, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
E+ G + ND GN+ N+V G+DV DG + D + + +
Sbjct: 6 GGANAETFTGGADNDTASGNAGNDVLIGKGGSDVLDGGADNDALYTDSLLGDNGTLDRDA 65
Query: 324 AIIVYDANEHKQDFLSDV 341
+ +
Sbjct: 66 TADTVNGGAGDDTISAGF 83
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 22/71 (30%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ VG + + G + N+ ++GNDV G G D A + D
Sbjct: 3 NFVGGANAETFTGGADNDTASGNAGNDVLIGKGGSDVLDGGADNDALYTDSLLGDNGTLD 62
Query: 330 ANEHKQDFLSD 340
+
Sbjct: 63 RDATADTVNGG 73
>gi|110331901|gb|ABG67056.1| matrix metalloproteinase 14 preproprotein [Bos taurus]
Length = 536
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 141 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 200
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 260
Query: 149 VDNDYEN 155
D EN
Sbjct: 261 QWMDTEN 267
>gi|302130943|ref|ZP_07256933.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 1610
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 57/174 (32%), Gaps = 7/174 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
N + + D G+D L + LNT + + GG
Sbjct: 1392 TDTANATGNALDNVLYAGAGDNVMDGRDGNDTASY-LFASAGVTVALNTSAQQATGG--S 1448
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + T E++ GS D + GN NV +GND G +G D + +
Sbjct: 1449 GLDTLKGT--ENLTGSQFADSLTGNKNANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIG 1506
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + +E +D L D+ F D ++ T +++
Sbjct: 1507 GTGADRYVFNSIDEVGRDGLRDI-INGFKVGEGDKLDFTGFDARPLTDTHDAFT 1559
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 47/132 (35%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N+ Y + + +D +I + + + ++ G E N
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEAN 390
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I E + G +G D + G + +++ +G D G +G DTF + + Y+
Sbjct: 391 DVITGGAAHELIFGLAGKDTLDGGTGDDILVGGAGADKLSGGAGADTFRFDQLTDSYRTA 450
Query: 320 RFENAIIVYDAN 331
++ D N
Sbjct: 451 TTSATDLLTDFN 462
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+S++ G I E++ G+ GND ++G ++ +G DV +G +G D
Sbjct: 779 ADSFAINVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAGRDA 838
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ A + + ++ YDA+ D + D
Sbjct: 839 LYGGADADTFVYSTLTDSYRDYDASGLTATDTIFDF 874
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 26/71 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 534 TEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLTGGAGADVFVYSSR 593
Query: 313 SYLYKIYRFEN 323
Y+ Y
Sbjct: 594 LDSYRNYTAGG 604
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D +IG++ N++ G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ ++VE L
Sbjct: 1287 VSSVSWTLGANVENLLLTGVSAIDGTGNA 1315
>gi|270015555|gb|EFA12003.1| hypothetical protein TcasGA2_TC006893 [Tribolium castaneum]
Length = 767
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 69/206 (33%), Gaps = 70/206 (33%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-----------TSIHSDIKFIS 83
L + + +E+A+ A +W V +L FE S+ DI
Sbjct: 345 WNKTNLKWYFSLATNEMKELAQKAFDQWESVSNLKFEYWHSQPSAVGEYNSVKPDILISF 404
Query: 84 SN-----------NGYVCTPRYDS-------RYFME------INFDKADVWRYGIGKGTI 119
SN +C+ +D +F I+FDK++ W +G T
Sbjct: 405 SNTLFQHNHNSRCQKGICSSSFDGKGNVLAHGFFPNNDECLGIHFDKSENWYFGESSNTP 464
Query: 120 LSHN-----ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM-SYFMPQDSMM 173
LHEIGH LG+ H + N S+M +Y+ +
Sbjct: 465 DDQTNFYTVLLHEIGHTLGIEHSANNN-------------------SIMYAYYKGDIDKL 505
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPK 199
D+ A+Q +YG P+
Sbjct: 506 TR----------DDMWAIQYLYGIPE 521
>gi|217978121|ref|YP_002362268.1| hypothetical protein Msil_1963 [Methylocella silvestris BL2]
gi|217503497|gb|ACK50906.1| hypothetical protein Msil_1963 [Methylocella silvestris BL2]
Length = 1306
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 63/181 (34%), Gaps = 13/181 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G+ TI + + G GNDV+ G+ +V + +GND G G DT
Sbjct: 631 TIHGFNGADTIYGDYGNDILYGDDGNDVIYGDEGADVLYGGAGNDHLYGGDGNDTIHGEY 690
Query: 312 PSYLYKIYRFENAIIVYDANE-----HKQDFLSDV---ERLRFADQCIDSVNVKQRSILE 363
+ N + ++ D +SD ++L + QR E
Sbjct: 691 GNDTLDGGAGGNFLSALTGDDTFVYGGGHDVISDTGGSDQLLLPSGIVLGDLTFQRVSTE 750
Query: 364 YTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY---LGSYDDLRNVFGSD 418
+ SY D LI + G E HF + D+ + D+ G+D
Sbjct: 751 GSLSYFDDLLINIDGAGTIEIKAHFQSSSFRIETLVFSDTSTLDLTTLANPDVYLTAGND 810
Query: 419 R 419
Sbjct: 811 T 811
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 54/166 (32%), Gaps = 20/166 (12%)
Query: 193 KIYGAP--KGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI 243
+YG S + IY +Y G D + + T+ GG
Sbjct: 1079 YLYGHDVGDASSADTIYGYAGNDTIDAGDGNDLVYAGDGADYVYASNGNDTVYGGNDAD- 1137
Query: 244 DLNTESWSSIGGYEKNMTI--------AQHTVIESVVGSSGNDVVIG-NSANNVFFESSG 294
+L+ + S + G N + A T++ ++ G G D + G N V +G
Sbjct: 1138 ELHGKFHSVLYGEAGNDDLYANPYSNEAAGTLV-TLFGGDGADTLHGGNYGETVMHGGNG 1196
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
D + G DTF + A S + + D L
Sbjct: 1197 VDTMISAYGTDTFAFDAASAFNAVDVIQQFNTSEHDKIDISDVLDG 1242
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 61/401 (15%), Positives = 117/401 (29%), Gaps = 51/401 (12%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE----------SVVGSSGN 277
LDLT + Y L + + G I + + G +GN
Sbjct: 790 TSTLDLTTLANPDVY--LTAGNDTFTSGATGAFAIYGGDGDDYMSDYQNAAHTFDGGNGN 847
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANE 332
D + G + N+ + S+G D ++G DT A + Y+I +
Sbjct: 848 DAMYGGAGNDTYIASTGFDTISENAGTDTIVVPAAFTIDDVTFYRILNGSGPTDNLGISI 907
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ ++ + + A + +I S + ++ H +
Sbjct: 908 NGLGEIAVIAQFSSALVEYMHFDNDNSTISLSGLSITTVGTAGNDNLSPPSTHAGANDIL 967
Query: 393 EGRD--------ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+GR+ D+Y++ +D + G D Y G +F
Sbjct: 968 DGREGDDYVNGGSGDDTYIFSAGHDTITESSGDDTILVRSSYAP-----GDISISFVPYY 1022
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN------- 497
Y + L + ++ + + G G D+ ++ S ++
Sbjct: 1023 YDTTGMRLEDTDGNSITVYRQGYS----SGYVVEHVAFADTTVWNLSSMEIETHGTSSAD 1078
Query: 498 -VFGSDRGAAARHYITHGVKEGRNPDAFK--ALEYIASHEDLINA-------FADAPDLV 547
++G D G A+ +G DA L Y D + A +
Sbjct: 1079 YLYGHDVGDASSADTIYGYAGNDTIDAGDGNDLVYAGDGADYVYASNGNDTVYGGNDADE 1138
Query: 548 QAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
GK H +G + NP + + G
Sbjct: 1139 LHGKFHSVLYGEAGNDDLYANPYSNEAAGTLVTLFGGDGAD 1179
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+G TI + +++ GND+V + + S+GND G + D
Sbjct: 1084 DVGDASSADTIYGYAGNDTIDAGDGNDLVYAGDGADYVYASNGNDTVYGGNDADELHGKF 1143
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S LY ++ +NE ++ +++ + +
Sbjct: 1144 HSVLYGEAGNDDLYANPYSNEAAGTLVT---LFGGDGADTLHGGNYGETVMHGGNGVDTM 1200
Query: 372 IQVIGQDVFE 381
I G D F
Sbjct: 1201 ISAYGTDTFA 1210
>gi|220926101|ref|YP_002501403.1| family 2 glycosyl transferase [Methylobacterium nodulans ORS 2060]
gi|219950708|gb|ACL61100.1| glycosyl transferase family 2 [Methylobacterium nodulans ORS 2060]
Length = 814
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 17/135 (12%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSY 402
ADQ Y + + + +D + + H+ ++G + + F +
Sbjct: 9 SLADQAAAIAESGLFDAQYYLSQ----VDIDLRDEKDLIAHYIQYGWEANLNPSRRFSTA 64
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
YL +++D+R+ R HY+T G EGR E + L A +DA
Sbjct: 65 AYLEAHEDVRDA----RVNPLVHYVTFGSSEGRKIAPPHNREVSKIYVPLPRAPSDAEWA 120
Query: 463 VQVGKDHFSNFGCEE 477
+G E
Sbjct: 121 D-------LEYGFAE 128
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE--EGRSITFNPDLYLTSYD 577
F A Y++ + + D DL+ H+ +G+E S F+ YL +++
Sbjct: 19 ESGLFDAQYYLSQVDIDLR---DEKDLIA----HYIQYGWEANLNPSRRFSTAAYLEAHE 71
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
D+ + R HY+T G EGR +
Sbjct: 72 DVRDA----RVNPLVHYVTFGSSEGRKIAPP 98
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 20/128 (15%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
F A Y++ + D DL+ H+ +G E + F + YL +++
Sbjct: 19 ESGLFDAQYYLSQ---VDIDLRDEKDLIA----HYIQYGWEANLNPSRRFSTAAYLEAHE 71
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D+R+ R HY+T G EGR + ++ + P +
Sbjct: 72 DVRDA----RVNPLVHYVTFGSSEGRKIAPPH-------NREVSKIYVPLPRAPSDAEWA 120
Query: 554 FSNFGYEE 561
+G+ E
Sbjct: 121 DLEYGFAE 128
>gi|34395498|sp|Q44495|ALGE2_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 2; AltName:
Full=Mannuronan epimerase 2
gi|790693|gb|AAA87312.1| mannuronan C-5-epimerase [Azotobacter vinelandii]
Length = 997
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL+ +GG +D T + G + N T++ + E ++G GND + G + N++
Sbjct: 809 DLSALGGANLILDART----VLAGGDGNDTLSGSSAAEELLGGVGNDSLDGGAGNDILDG 864
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G D G SG D F + ++ Y + + DF + + +
Sbjct: 865 GAGRDTLSGGSGSDIFRFGGALDSFRNYASGT-----NGTDSITDFTPGEDLIDLSVLGY 919
Query: 352 DSVNVKQRSIL 362
+ L
Sbjct: 920 TGLGDGYNGTL 930
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDL-NTESWSS 252
G N+ Y I+ + + + ++Y + ++ + + L G DL T ++
Sbjct: 327 GNTIVGSANSTYGIQERDDGTDY-SSLYANSVSNVQNGSVRLYGANSVVSDLPGTGQQAT 385
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ E+++G GND + G + N++ +G D G +G D F A
Sbjct: 386 LEGTAGNDTLGGSDAHETLLGLDGNDRLNGGAGNDILDGGAGRDNLTGGAGADLFRVSAR 445
Query: 313 SYLYKIY--RFENAIIVYDANEHKQDF 337
+ Y+ F + I +DA++ + D
Sbjct: 446 TDSYRTDSASFNDLITDFDASQDRIDL 472
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 41/96 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + E+++G +GND + G + +++ +G D G +G D F + A
Sbjct: 537 IEGDAGDNALLGTSAAETLLGHAGNDTLDGGAGDDILVGGAGRDSLTGGAGADVFRFDAL 596
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
S + Y + A+ + DV L F
Sbjct: 597 SDSQRNYDIGDNQGDRIADFAVGEDKLDVSALGFTG 632
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDAN 331
GS+GND + G +A+ V G D G +G D F + + Y + + I +DA+
Sbjct: 696 GSAGNDSLQGTAADEVIHGGGGRDTLAGGAGADVFRFSELTDSYRDSASYADLITDFDAS 755
Query: 332 EHKQDF 337
E + D
Sbjct: 756 EDRIDL 761
>gi|47523560|ref|NP_999404.1| matrix metalloproteinase-14 precursor [Sus scrofa]
gi|11386723|sp|Q9XT90|MMP14_PIG RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
gi|5051632|gb|AAD38324.1|AF067419_1 membrane-type 1 matrix metalloproteinase [Sus scrofa]
Length = 580
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 140 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 199
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 200 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 259
Query: 149 VDNDYEN 155
D EN
Sbjct: 260 QWMDTEN 266
>gi|242278269|ref|YP_002990398.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
gi|242121163|gb|ACS78859.1| Hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
Length = 818
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 49/173 (28%), Gaps = 25/173 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD------- 305
G + +I+ ++++ G G+D++ G + + GND G D
Sbjct: 557 YNGAGGDDSISGKQGVDTLFGGLGDDIIDGGNGADSIDGGGGNDTIYGGQNADYIDGGAD 616
Query: 306 -TFFYYAPSYLYKIYRFENAIIVYDANEHK--------------QDFLSDVERLRFADQC 350
Y + I N + Y+ D L +E + D
Sbjct: 617 NDLIYGGQNGDTMIGGEGNDTVSYEGGSAVQVNLADGTVSGGSNTDTLVSIENVIGTDNN 676
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD---VFESMKHFYEFGLSEGRDITFD 400
+ L A + L D F +EGRD D
Sbjct: 677 DALNGCDAPNSLSGGAGDDTLFGSGDADYLSGGTGDDVFSYTSSAEGRDTIAD 729
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 5/123 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-- 310
G + I +++ G GND++ GN +++ SG D DG G D F Y
Sbjct: 378 YDGRGGDDYIDGKEGNDTLKGGDGNDIIYGNIGDDLIEGGSGADTLDGGDGQDIFRYSEA 437
Query: 311 ---APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ L ++ + N + + +E + +
Sbjct: 438 EGLSGEELQSFSSADDTLDFSGENFSETAIFAAIEANDYTGTNVTMGTTPVFVFDAGGKL 497
Query: 368 YED 370
+ D
Sbjct: 498 WYD 500
Score = 40.9 bits (94), Expect = 0.72, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 29/108 (26%), Gaps = 7/108 (6%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
I ES G+ D G ++ GND G G D +
Sbjct: 352 TSGDGIDWGDATESADRWTGTVNTDYYDGRGGDDYIDGKEGNDTLKGGDGNDIIYGNIGD 411
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
L + + QD E + + + S + ++
Sbjct: 412 DLIE----GGSGADTLDGGDGQDIFRYSEAEGLSGEELQSFSSADDTL 455
>gi|241204669|ref|YP_002975765.1| hypothetical protein Rleg_1944 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858559|gb|ACS56226.1| hypothetical protein Rleg_1944 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 621
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 20/188 (10%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD---SGGDDLLDLTLIGGVKNYIDLN 246
A +YG GN+ + + + I D GG D + + I
Sbjct: 404 ATNHLYG----GTGNDTFTVTNANQ-------IVDESRGGGTDTVKAS-ISFSLADQKHT 451
Query: 247 TESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ ++ N++ + + G+ GN+ + G N+ GND G +G D
Sbjct: 452 VGTIENLTLTGTGNLSATGNNTANILTGNDGNNSLNGGKGNDRLIGGLGNDKLIGKAGAD 511
Query: 306 TFFYYAPSYLYKIYRFENAII---VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
S + + + D + D L ++ FA+ + + + +
Sbjct: 512 VLTGGGGSDSFVFDVKPDNTSVDKIRDFSSAAGDKLM-LDHSIFAELSLSGFSDENFVLG 570
Query: 363 EYTASYED 370
+D
Sbjct: 571 RKALEADD 578
>gi|254848739|ref|ZP_05238089.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|254844444|gb|EET22858.1| conserved hypothetical protein [Vibrio cholerae MO10]
Length = 1248
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 945 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 999
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 1000 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 1059
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 1060 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 1119
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 1120 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 1172
>gi|254500122|ref|ZP_05112274.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222441420|gb|EEE48098.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 584
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 15/130 (11%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVG 273
+ TI GDD LN IGG N T+ + + G
Sbjct: 176 AAAGADTIIGGDGDDT--------------LNGGDGPDLIGGGRGNDTLNGDAGDDELHG 221
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + G + N+ G D +G +G DT A + ++ + D +
Sbjct: 222 GLGNDTLNGGADNDYLAGEEGADTLNGGTGNDTLRGGADADTLTGGEGDDIFVFLDGDIA 281
Query: 334 KQDFLSDVER 343
+ ++D E
Sbjct: 282 AGEKITDYEY 291
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N + ++++G G+D + G ++ GND +G +G D
Sbjct: 165 IFALAGNDVVFAAAGADTIIGGDGDDTLNGGDGPDLIGGGRGNDTLNGDAGDDELHGGLG 224
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ A Y A E D L+
Sbjct: 225 NDTL----NGGADNDYLAGEEGADTLNG 248
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 39/143 (27%), Gaps = 12/143 (8%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
IDL + G + I + V ++G D +IG ++ G D+
Sbjct: 143 SEATMIDLEDIGF--HEGTDGLDIIFALAGNDVVFAAAGADTIIGGDGDDTLNGGDGPDL 200
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G G DT A D+L+ E
Sbjct: 201 IGGGRGNDTLNGDAGDD----ELHGGLGNDTLNGGADNDYLAGEE------GADTLNGGT 250
Query: 358 QRSILEYTASYEDLIQVIGQDVF 380
L A + L G D+F
Sbjct: 251 GNDTLRGGADADTLTGGEGDDIF 273
>gi|16264638|ref|NP_437430.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
1021]
gi|307303508|ref|ZP_07583262.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
BL225C]
gi|307318641|ref|ZP_07598074.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
AK83]
gi|1890590|emb|CAB01938.1| ExpE1 [Sinorhizobium meliloti]
gi|15140776|emb|CAC49290.1| putative Ca2+-binding protein WgeA (formerly ExpE1) [Sinorhizobium
meliloti 1021]
gi|306895668|gb|EFN26421.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
AK83]
gi|306902899|gb|EFN33491.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
BL225C]
Length = 219
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ G+D + GG + + G + I + ++G +G+D ++
Sbjct: 49 LFGGNGNDTV----FGGEGTDVLYGENGNDILVGGSGDDLIYGDNGNDILLGGAGSDFLL 104
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G N+V +GNDV DG +G D S ++ ++ D
Sbjct: 105 GGRGNDVLLGGAGNDVIDGGAGSDLLAGGQGSDIFVFDGGGGNDVILDFTPG 156
>gi|332705379|ref|ZP_08425457.1| glycerophosphoryl diester phosphodiesterase [Lyngbya majuscula 3L]
gi|332355739|gb|EGJ35201.1| glycerophosphoryl diester phosphodiesterase [Lyngbya majuscula 3L]
Length = 974
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 7/169 (4%)
Query: 222 IYDSGGDDLLDLTLIG---GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
I + G+D +D L + D+ ++ + I + + G+ GND
Sbjct: 806 ITAAEGNDTVDGGLGNDLIQGEAGDDVLQGDFAD-STIGGDDVIFGGLGNDRINGNLGND 864
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + ++ F + G+D+ G G D S + F + + + DF
Sbjct: 865 KLYGGAGDDFIFGNEGDDLIRGGLGNDFLTGDDSSGISGSDTF--VLAAGEGTDFILDFQ 922
Query: 339 SDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ V+ + AD ++++Q S + L+ + F
Sbjct: 923 AGVDLIGLADGLTFGQLSIEQDSQNARISLENQLLATFAIANPLTEADF 971
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 36/147 (24%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+++ + + I+ G+D ++ G N
Sbjct: 828 AGDDVLQGDFADSTIGGDDVIFGGLGNDRIN----------------------GNLGN-- 863
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-----SGLDTFFYYAPSYLY 316
+ + G +G+D + GN +++ GND G SG DTF A
Sbjct: 864 -------DKLYGGAGDDFIFGNEGDDLIRGGLGNDFLTGDDSSGISGSDTFVLAAGEGTD 916
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVER 343
I F+ + + + +E+
Sbjct: 917 FILDFQAGVDLIGLADGLTFGQLSIEQ 943
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 38/136 (27%), Gaps = 14/136 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--KIYRFENAII 326
+ +VG GND + N+ GND+ G +G D F
Sbjct: 795 DEIVGELGNDFITAAEGNDTVDGGLGNDLIQGEAGDDVLQGDFADSTIGGDDVIFGGLGN 854
Query: 327 VYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L + F ++ D + + +D + G D F
Sbjct: 855 DRINGNLGNDKLYGGAGDDFIFGNEGDDLIRGGLGNDFLTG---DDSSGISGSDTFVL-- 909
Query: 385 HFYEFGLSEGRDITFD 400
EG D D
Sbjct: 910 -----AAGEGTDFILD 920
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 31/151 (20%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-------------- 298
I G + I + + + GND V G N++ +G+DV
Sbjct: 788 ISGTPDSDEIVGELGNDFITAAEGNDTVDGGLGNDLIQGEAGDDVLQGDFADSTIGGDDV 847
Query: 299 ----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER--LRF 346
+G+ G D + A + F N DFL+ + +
Sbjct: 848 IFGGLGNDRINGNLGNDKLYGGAGDD----FIFGNEGDDLIRGGLGNDFLTGDDSSGISG 903
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+D + + IL++ A DLI +
Sbjct: 904 SDTFVLAAGEGTDFILDFQAG-VDLIGLADG 933
>gi|119489126|ref|ZP_01622032.1| hypothetical protein L8106_22526 [Lyngbya sp. PCC 8106]
gi|119454875|gb|EAW36019.1| hypothetical protein L8106_22526 [Lyngbya sp. PCC 8106]
Length = 454
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 7/133 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + I +++ G ND + G + F + G D +G G D+ F
Sbjct: 77 INGNQDDDLILGGLGTDTLFGGQDNDSLDGQGKEDQLFGNLGQDTLNGGEGSDSLFGGQD 136
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ F N + + D L+ E AD + ++ + ++ DLI
Sbjct: 137 NDQL----FGNQGQDTLSGDKGSDTLTGGE---GADVFVAQLSGAEPDLITDFQDGIDLI 189
Query: 373 QVIGQDVFESMKH 385
Q+ F ++
Sbjct: 190 QLPENLEFTDLQL 202
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 14/158 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D L GG N S+ G K + + +++ G G+D + G N
Sbjct: 91 GTDTL----FGGQDND---------SLDGQGKEDQLFGNLGQDTLNGGEGSDSLFGGQDN 137
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ F + G D G G DT + ++ + + D + E L F
Sbjct: 138 DQLFGNQGQDTLSGDKGSDTLTGGEGADVFVAQLSGAEPDLITDFQDGIDLIQLPENLEF 197
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + +Q ++ A+ E+L+ + G + E
Sbjct: 198 TDLQLREQGTEQI-LITDAATGEELVILEGFSLSELTA 234
>gi|268565745|ref|XP_002647392.1| Hypothetical protein CBG06459 [Caenorhabditis briggsae]
Length = 572
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 62/205 (30%), Gaps = 51/205 (24%)
Query: 13 IADHLLRDQY---WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
L W + Y + ++ D+ + A G WSKV L
Sbjct: 126 APLALTSGSSQFKWPKNRLTYSIESWSSDLPKEDV-------RRAIAEAYGLWSKVTPLE 178
Query: 70 FEETSIHSD----IKFI---------SSNNGYVCTPRYDSRYFMEINFDKADVWRYG--- 113
F E S I+F G V M +FD + W Y
Sbjct: 179 FSEVPAGSTSDIKIRFGVRNHNDPWPFDGEGGVLAHATMPESGM-FHFDDDENWTYKDAR 237
Query: 114 ---IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
+ T L A+H GH LGL H N +M+ F +
Sbjct: 238 KIHSNQATDLLAVAIHG-GHTLGLEHSRDENA-------------------IMAPFYQKT 277
Query: 171 SMMDASFGYCATPMVSDIVAVQKIY 195
+ + ++ Y DI A+Q IY
Sbjct: 278 TDSNGNYVYPN-LKSDDISAIQAIY 301
>gi|307299839|ref|ZP_07579624.1| putative protease [Sinorhizobium meliloti BL225C]
gi|306904728|gb|EFN35311.1| putative protease [Sinorhizobium meliloti BL225C]
Length = 454
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 10/181 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+++Y + Y GG + G ++ S ++ G + +
Sbjct: 159 DSLYGGTGNDVLNGGYYGDYLDGGAGSDTASYSGALEGV----AASLANSSGNTGDASSD 214
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ IE++ GSS D + GNS N SGNDV GS+G D + + +
Sbjct: 215 TYVSIENLGGSSYGDRLYGNSGANTLNGGSGNDVLVGSAGADKLYGGSGYDTASYASGKA 274
Query: 324 AIIVY------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+IV + N+ D S VE + + + + L G
Sbjct: 275 GVIVSLGNPSANTNDAAGDTFSSVEAIIGTGYADKLYGNSANNGITGGNGNDSLNAYGGN 334
Query: 378 D 378
D
Sbjct: 335 D 335
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 45/147 (30%), Gaps = 6/147 (4%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G+ N I + + G GND + G ++ + +GNDV +G D A S
Sbjct: 127 GFGGNDVITGGQYWDDLFGDEGNDTLYGYFDSDSLYGGTGNDVLNGGYYGDYLDGGAGSD 186
Query: 315 LYKIYRFENAIIVYDANEHK------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ AN D +E L + + L +
Sbjct: 187 TASYSGALEGVAASLANSSGNTGDASSDTYVSIENLGGSSYGDRLYGNSGANTLNGGSGN 246
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ L+ G D + + G+
Sbjct: 247 DVLVGSAGADKLYGGSGYDTASYASGK 273
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 23/190 (12%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ +Y + S G D L +Y S+G N
Sbjct: 228 GDRLYGNSGANTLNGGSGNDVLVGSAGADKLYGGSGYDTASYASGKAGVIVSLGNPSANT 287
Query: 261 TIAQHTV---IESVVGSSGNDVVIGNSA---------NNVFFESSGNDVFDGSSGLDTFF 308
A +E+++G+ D + GNSA N+ GND+ G +G D
Sbjct: 288 NDAAGDTFSSVEAIIGTGYADKLYGNSANNGITGGNGNDSLNAYGGNDLLYGGAGGDHLA 347
Query: 309 YYAPSYLYKI--------YRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQR 359
A + ++ F+ K D + D DQ +
Sbjct: 348 GGAGADVFAFKALSDSRGTTFDTIFDFLTGEHDKIDLSVIDANPFAGGDQQFSFIGASAF 407
Query: 360 SILEYTASYE 369
+ Y+
Sbjct: 408 TGQAGELRYD 417
>gi|291298168|ref|YP_003509446.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290567388|gb|ADD40353.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 572
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 7/152 (4%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ G K ID S ++ + T+ + + G SGNDV+ G+ +++ S
Sbjct: 195 SGGGNDKVSIDDKVGSGITVSAGSGDDTVDGGGKADVIDGGSGNDVLKGHDGDDIIHGGS 254
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D DG G D A + +Y + ++ D L + D
Sbjct: 255 GHDYIDGQDGNDRLHGGAGND--HVYGLDGDDTIHGG--DGDDSLEGGQNNDTIDGGTGK 310
Query: 354 VNVK---QRSILEYTASYEDLIQVIGQDVFES 382
V L A + + G+D +
Sbjct: 311 DVVSGGYGDDTLRGGAQNDKIYAGAGKDTIDG 342
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S+ G + N TI T + V G G+D + G + N+ + +G D DG G D F
Sbjct: 294 SLEGGQNNDTIDGGTGKDVVSGGYGDDTLRGGAQNDKIYAGAGKDTIDGGDGTDETF 350
>gi|113968728|ref|YP_732521.1| putative outer membrane adhesin like protein [Shewanella sp. MR-4]
gi|113883412|gb|ABI37464.1| putative outer membrane adhesin like protein [Shewanella sp. MR-4]
Length = 5442
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 10/169 (5%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + T+ + V G +GND++IG + + GND G G D S
Sbjct: 5253 GEGDDTVYGGEGTQMVYGGAGNDLLIGGAGIDGLRGGDGNDTLIGGLGDDVLRGDGGSDT 5312
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ ++R+ +A D H DF ++L +D S L+++ + I
Sbjct: 5313 F-VWRYADADQGTD---HIMDFNVREDKLDLSDLLQGETANTLESYLKFSLDNGSTVIDI 5368
Query: 376 GQDVFESM-KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ +H G++ FD Y + + + GS+
Sbjct: 5369 DANKDGVFDQHIVLDGVN-----LFDQYSATDNAGVINGLLGSNGNGPL 5412
>gi|540077|gb|AAA21546.1| HlyA [Nostoc sp. PCC 7120]
Length = 322
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 4/133 (3%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
LD L GG N L + + + G N +I ++ + G +D + GN+ N++
Sbjct: 21 TLDNILSGG-DNDDTLRGNAGNDTLFGGSGNDSITGNSADNILSGGDNDDTLRGNAGNDI 79
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+GND DG G D A + Y + + II + + D + L D
Sbjct: 80 LNGGAGNDSLDGGLGDDVMTGGASNDTYFVDSSNDTII--EEADGGTDTVRASITLTLGD 137
Query: 349 QCIDSVNVKQRSI 361
+ + + I
Sbjct: 138 HLENLILIGNSPI 150
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 3/165 (1%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-SSIGGYEKNMTI 262
N+ E +I + GD L +L LIG ID + ++I G N +
Sbjct: 113 NDTIIEEADGGTDTVRASITLTLGDHLENLILIGNSP--IDGTGNALRNNITGNVANNIL 170
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ ++++ G+D + G+S N+ +GND+ G G D +
Sbjct: 171 SGGADNDTIISGDGDDTLYGDSGNDTLTGGNGNDILVGGMGSDRLTGGNGKDTFAFSAPI 230
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
I + + D L V+ F + ++ + +L A
Sbjct: 231 TDGIDTITDFNPLDDLLRVDAAGFGGGLVAGTLLRSQFVLGTAAK 275
>gi|329849391|ref|ZP_08264237.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841302|gb|EGF90872.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1280
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 72/198 (36%), Gaps = 16/198 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLI-----GGVKNYIDLNTESWSS 252
G + + ++ D G G ++ T I +Y+D +T + +
Sbjct: 469 THLTGETVIGLTGGTGFDIMDASLADGGPGWIFVNFTSIEEYRGSAFNDYLDASTMTSAG 528
Query: 253 I--GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T+ ++ +++ G GND + G S N+ GND G G DT
Sbjct: 529 LLFAGNAGNDTLKGGSLNDTLTGGIGNDSLEGGSGNDTVNGGDGNDTLLGGVGADTLTGG 588
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS--- 367
+ Y + ++++ +A+ D + + + ++ + N+ A+
Sbjct: 589 LGNDTYYVDNAADSVV--EAHLEGTDTV--ISSVTYSLLGRAAENLTLTGAGHLNATGNG 644
Query: 368 -YEDLIQVIGQDVFESMK 384
L G ++ +
Sbjct: 645 LNNTLTGNSGNNLIDGGA 662
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 72/211 (34%), Gaps = 17/211 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSI 253
G + G+ T+ G+D D V+ +++ SS+
Sbjct: 563 GNDTVNGGDG----NDTLLGGVGADTLTGGLGNDTYYVDNAADSVVEAHLEGTDTVISSV 618
Query: 254 -----GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G +N+T+ + + G+ N+ + GNS NN+ +GND G +G DT+
Sbjct: 619 TYSLLGRAAENLTLTGAGHL-NATGNGLNNTLTGNSGNNLIDGGAGNDSMTGGAGNDTYI 677
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTAS 367
+ + A + + +D+E L + + + L +
Sbjct: 678 VDSIGD--TVTEGGGAGLDIVQSAVTFTLGADIEDLTLTGGGLANGTGNALNNRLIGNTA 735
Query: 368 YEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
L G D V ++ +EG D
Sbjct: 736 GNTLTGKAGNDTYVLQNSSDSAVEAAAEGTD 766
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 13/187 (6%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++S +G +N+T+ + + G+ N+ + GN+ N+ +G D+ G G DT++
Sbjct: 845 TYSLLGRAAENLTLTGAAAL-NATGNGLNNALTGNAGANLLDGGAGVDILTGGLGNDTYY 903
Query: 309 YYAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSDVERLRFADQCIDSVNVKQR-- 359
S E V + + L+ L +++V V
Sbjct: 904 VDHISDNVVEAHLEGTDSVISSVTYTLLGRAAENLTLTGTANLNAIGNGLNNVLVGNTGN 963
Query: 360 SILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFG 416
++L+ + + +G D ++ + EG D + Y LG+ + + G
Sbjct: 964 NLLDGAVGNDSMTGGLGNDTYTVDAAGDVVTEAVGEGTDEVQSTRTYVLGANLENLVLTG 1023
Query: 417 SDRGAAA 423
+ A
Sbjct: 1024 TGIANAT 1030
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 9/210 (4%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T Y D + + G + I + +++ +G +N+T+ T + +G+ N
Sbjct: 898 GNDTYYVDHISDNVVEAHLEGTDSVIS--SVTYTLLGRAAENLTL-TGTANLNAIGNGLN 954
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+V++GN+ NN+ + GND G G DT+ A + E V +
Sbjct: 955 NVLVGNTGNNLLDGAVGNDSMTGGLGNDTYTVDAAGDVVTEAVGEGTDEVQSTRTYVLG- 1013
Query: 338 LSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEG 394
+++E L I + + L + L +G D V ++ + EG
Sbjct: 1014 -ANLENLVLTGTGIANATGNALNNRLTGNITGNVLTGGLGNDVYVVQNTSDTTVELVGEG 1072
Query: 395 RDITFDSYLY-LGSYDDLRNVFGSDRGAAA 423
D S Y L + + + G+ +
Sbjct: 1073 TDFVVSSVSYTLAANVENLTLTGTANLSGT 1102
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 39/104 (37%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ ++ +IGNS N+ +GND G+ G D F + S L + F A
Sbjct: 1173 NATGNGLSNSLIGNSGVNILEAGAGNDNLRGNGGADVFLFLTGSGLDTVKDFTAAQNDSI 1232
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+++ + + + I A+ D++
Sbjct: 1233 NVNAYMAGVANAGLVTQSGANVLISLSAGNVITVENATQADVLA 1276
Score = 40.1 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 4/100 (4%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS--GLDTFFYYAPSYLYKI 318
T+I ++GN + G ++ GND+ G G D F A + +
Sbjct: 394 VFYLDTLINDAAAANGN--LTGGMGSDTINGLDGNDMIFGGEGPGRDDMFGGAGNDTITL 451
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ + A + + L+ + +
Sbjct: 452 WGGDGADGGTGDDIIRVTHLTGETVIGLTGGTGFDIMDAS 491
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 18/157 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN+ ++ G+D + IG + + +
Sbjct: 644 GLNNTLTGNS---GNNLIDGGAGNDSMTGGAGNDTYIVDSIGDT-----VTEGGGAGLDI 695
Query: 256 YEKNMTIAQHTVIE----------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ +T IE + G++ N+ +IGN+A N +GND + + D
Sbjct: 696 VQSAVTFTLGADIEDLTLTGGGLANGTGNALNNRLIGNTAGNTLTGKAGNDTYVLQNSSD 755
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ A I + + S +
Sbjct: 756 SAVEAAAEGTDTIETNLTRTLSANIENLILTGASAIN 792
Score = 38.2 bits (87), Expect = 4.7, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 268 IESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+E++ + N GN NV +SGN++ G G D ++
Sbjct: 1088 VENLTLTGTANLSGTGNDLANVLTGNSGNNILTGGLGDDIYYIQNAGDS 1136
>gi|310816913|ref|YP_003964877.1| beta-lactamase, putative [Ketogulonicigenium vulgare Y25]
gi|308755648|gb|ADO43577.1| beta-lactamase, putative [Ketogulonicigenium vulgare Y25]
Length = 939
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 12/143 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ GG + ++A +++ G GNDV+ G ++ + ++GND G G DT +
Sbjct: 675 NFGGTSASDSLAGTQFNDTLRGYGGNDVLFGWDGDDTLYGNAGNDWLIGGRGADTMYGGV 734
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLR-FADQCIDSVNVKQRSI 361
Y + + +I + + D + ++VE LR D ++ + ++
Sbjct: 735 GDDNYHVDDPGDMVI--ENPDQGNDTVYAEITYTLPANVENLRLLGDANLNGYGNELDNL 792
Query: 362 LEYTASYEDLIQVIGQDVFESMK 384
L L G D +
Sbjct: 793 LVGNYGDNYLEGGAGNDWLAAKA 815
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 48/147 (32%), Gaps = 15/147 (10%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
DI + + + K V + + +GG D+L G
Sbjct: 438 QPIDIANLSITDLINLTHIPPTLPKTNVAVPSAASEDMLIGTGGHDVLQAGDGGVT---- 493
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ E N + + ++G GND + G + NN F GN++ G +G
Sbjct: 494 ---------VYALEGNDIVIGGAGNDILIGGLGNDHLEGVAGNNYIFGGPGNNMIIGGTG 544
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDA 330
D A S I I+YD
Sbjct: 545 NDILVGGAGSN--TIIAGGGNNIIYDG 569
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ T+Y G+D++ IGG N I + + G N I ++G
Sbjct: 486 QAGDGGVTVYALEGNDIV----IGGAGNDILIGGLGNDHLEGVAGNNYIFGGPGNNMIIG 541
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+GND+++G + +N GN++ +G D + L+ + R ++
Sbjct: 542 GTGNDILVGGAGSNTIIAGGGNNIIYDGAGPDRMVSGPGANLFVLMRDSQPDVI 595
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + +T+ + V+G +GND++IG N+ +GN+ G G +
Sbjct: 485 LQAGDGGVTVYALEGNDIVIGGAGNDILIGGLGNDHLEGVAGNNYIFGGPGNNMIIGGTG 544
Query: 313 SYLYKIYRFENAIIVYDANEHKQD 336
+ + N II N D
Sbjct: 545 NDILVGGAGSNTIIAGGGNNIIYD 568
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 70/204 (34%), Gaps = 20/204 (9%)
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPK------GSLGNNIYK---IEVQQKDSPFIQTIYD 224
D GY ++ +YG G + +Y + D P I +
Sbjct: 692 DTLRGYGGNDVLFGWDGDDTLYGNAGNDWLIGGRGADTMYGGVGDDNYHVDDPGDMVIEN 751
Query: 225 SG-GDDL----LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI--AQHTVIESVVGSSGN 277
G+D + TL V+N L + + G N+ + +E G +GN
Sbjct: 752 PDQGNDTVYAEITYTLPANVENLRLLGDANLNGYGNELDNLLVGNYGDNYLE---GGAGN 808
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + + +N+ + G D G +G D F Y + + I + + + D
Sbjct: 809 DWLAAKAGSNILYGGPGRDWLVGGTGPDIFLYKDIADSPPGQSTRDLINNFTRGQDRID- 867
Query: 338 LSDVERLRFADQCIDSVNVKQRSI 361
LS ++ + AD + +
Sbjct: 868 LSAIDADQLADGHQSFTFIGANAF 891
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 11/181 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G +Y +E + G+D+L IGG+ N + I G N I
Sbjct: 491 GVTVYALEGND-------IVIGGAGNDIL----IGGLGNDHLEGVAGNNYIFGGPGNNMI 539
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T + +VG +G++ +I NN+ ++ +G D G + F S I F+
Sbjct: 540 IGGTGNDILVGGAGSNTIIAGGGNNIIYDGAGPDRMVSGPGANLFVLMRDSQPDVIEGFQ 599
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + ++ + + A I + I DL + D+F +
Sbjct: 600 LGKDRIDLSSWGASGIAALNISQTASGAIIRFGAELLEIFTADQKPLDLAALNYDDLFAT 659
Query: 383 M 383
Sbjct: 660 A 660
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-- 326
++ G+S +D + G N+ GNDV G G DT + A + R + +
Sbjct: 674 QNFGGTSASDSLAGTQFNDTLRGYGGNDVLFGWDGDDTLYGNAGNDWLIGGRGADTMYGG 733
Query: 327 VYDANEHKQD 336
V D N H D
Sbjct: 734 VGDDNYHVDD 743
>gi|256827824|ref|YP_003156552.1| von Willebrand factor type A [Desulfomicrobium baculatum DSM 4028]
gi|256577000|gb|ACU88136.1| von Willebrand factor type A [Desulfomicrobium baculatum DSM 4028]
Length = 2452
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 61/182 (33%), Gaps = 14/182 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNYID-----LNTESWSSI 253
N + F T+ + GD ++ G + L+ ++ S+
Sbjct: 2217 NTTGSVPDLGDSDVFTYTVAQADGDSSMADLTINFAGAVGQTGTGNSETLVLSVDTGGSM 2276
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N + +S+ G G+DV+ G N+ +G+D G +G DT A
Sbjct: 2277 SGLGGNDHLIGGEGDDSLYGGDGSDVLEGGLGNDYLGGGAGSDFLSGGAGSDTLVGGAGD 2336
Query: 314 YLYKIYRFEN---AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++ + AN D ++D E L +D + + Y D
Sbjct: 2337 DVMTGGAGQDVFRYMAGDLANAIDGDTITDFE-LGAGGDSLDLQALLTGATAGTLDQYLD 2395
Query: 371 LI 372
Sbjct: 2396 FT 2397
>gi|213972191|ref|ZP_03400275.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. tomato T1]
gi|301385400|ref|ZP_07233818.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv. tomato
Max13]
gi|302060442|ref|ZP_07251983.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv. tomato
K40]
gi|213923051|gb|EEB56662.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. tomato T1]
Length = 1610
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 57/174 (32%), Gaps = 7/174 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
N + + D G+D L + LNT + + GG
Sbjct: 1392 TDTANATGNALDNVLYAGAGDNVMDGRDGNDTASY-LFASAGVTVALNTSAQQATGG--S 1448
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + T E++ GS D + GN NV +GND G +G D + +
Sbjct: 1449 GLDTLKGT--ENLTGSQFADSLTGNKNANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIG 1506
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + +E +D L D+ F D ++ T +++
Sbjct: 1507 GTGADRYVFNSIDEVGRDGLRDI-INGFKVGEGDKLDFTGFDARPLTDTHDAFT 1559
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 47/132 (35%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N+ Y + + +D +I + + + ++ G E N
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEAN 390
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I E + G +G D + G + +++ +G D G +G DTF + + Y+
Sbjct: 391 DVITGGAAHELIFGLAGKDTLDGGTGDDILVGGAGADKLSGGAGADTFRFDQLTDSYRTA 450
Query: 320 RFENAIIVYDAN 331
++ D N
Sbjct: 451 TTSATDLLTDFN 462
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+S++ G I E++ G+ GND ++G ++ +G DV +G +G D
Sbjct: 779 ADSFAINVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAGRDA 838
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ A + + ++ YDA+ D + D
Sbjct: 839 LYGGADADTFVYSTLTDSYRDYDASGLTATDTIFDF 874
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 26/71 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 534 TEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLTGGAGADVFVYSSR 593
Query: 313 SYLYKIYRFEN 323
Y+ Y
Sbjct: 594 LDSYRNYTAGG 604
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D +IG++ N++ G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ ++VE L
Sbjct: 1287 VSSVSWTLGANVENLLLTGVSAIDGTGNA 1315
>gi|167625826|ref|YP_001676120.1| putative outer membrane adhesin-like protein [Shewanella halifaxensis
HAW-EB4]
gi|167355848|gb|ABZ78461.1| putative outer membrane adhesin like proteiin [Shewanella
halifaxensis HAW-EB4]
Length = 2109
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 75/238 (31%), Gaps = 37/238 (15%)
Query: 141 NGGYPVYGVDNDY-------ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G P DY ND++ + Y ++ + + + +A
Sbjct: 1824 GNGDPTTTSLADYIIANPVAANDTWQIT---YLD--NNGGNFQARFVEAVFTHEQIADDS 1878
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
I ++ N I+ + LD + G N I +
Sbjct: 1879 ITIVGTDNINNLIFGSTNSDSLTGAN-----------LDDRIFGREDNDILI-------- 1919
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N + + ++V G GND VIG ++ G D G G D+ A +
Sbjct: 1920 -GLSGNDELIGGSGNDNVQGGEGNDFVIGGIGDDTLNGGIGRDYLSGGQGNDSLDGGALN 1978
Query: 314 YLYKIYRFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVKQRSILEYTAS 367
R + + D+ + D + D++ L +D I + L ++ S
Sbjct: 1979 GSDDGER-DFFVWESDSADGSTDTVLNFNLDIDVLDLSDLLIGEESGNLEDFLSFSFS 2035
>gi|115727576|ref|XP_797582.2| PREDICTED: similar to collagenase 3 [Strongylocentrotus purpuratus]
gi|115939388|ref|XP_001185266.1| PREDICTED: similar to collagenase 3 [Strongylocentrotus purpuratus]
Length = 460
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 58/203 (28%), Gaps = 50/203 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---- 71
+ L WS I Y+ D T +AR AL W V L F
Sbjct: 155 YALAGDRWSKKHISYRIDNYPTSVW----IPRRRVQDSIAR-ALQMWGDVTPLDFRMLDD 209
Query: 72 --------------ETSIHSD---IKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYG 113
H D + P +++FD ++ + Y
Sbjct: 210 WDIDDEDADIYVSFSKYRHGDPYPFDGPDGTIAHAYLPNGQFGNLDGDVHFDDSEFFSYD 269
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G L A HE+GH+LGL H + S+M
Sbjct: 270 GDSGYNLFKVAAHELGHSLGLEHSHTMG-------------------SIMVPDYAGFKGD 310
Query: 174 DASFGYCATPMVSDIVAVQKIYG 196
D F DI A+Q +YG
Sbjct: 311 DNEFK----LGDDDIRAIQVLYG 329
>gi|46201653|ref|ZP_00054625.2| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 1249
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 6/167 (3%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + T+ G D +D + +G + + + T
Sbjct: 890 YADTFSVASASAGVTVDGGSGVDTMDYSAMGAG-----ITATVTGTSASVVHSGGTDAIT 944
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E +VGS +DV G + N+ F +GND F G G D + + +
Sbjct: 945 HVEVLVGSGYDDVFTGGTGNDTFSGGAGNDTFFGGVGADQLTGGLGADTFVYTAAAQSQD 1004
Query: 327 VYDANEHKQDFLSDVERLRFADQCI-DSVNVKQRSILEYTASYEDLI 372
A + DF + + ++ + V+ S Y L+
Sbjct: 1005 SLSARDIISDFTTGTDHIKLSLTGTHVDVSTFNDSAGSYNGGQATLM 1051
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 3/133 (2%)
Query: 230 LLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+++T D ++ ++ N+T+ + + G + + + G+ N+
Sbjct: 562 TINITNATTAGQWFKFDDQSDGFTINVTSSANVTVQGSQGNDIINGGNAGEFLWGDQGND 621
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRF 346
GND G +G D + Y + + V + D LS +E L F
Sbjct: 622 TIAGGQGNDTILGGAGTDVAVFTGAMANYAVTASGGTLTVAAQSGTDGTDKLSGMETLAF 681
Query: 347 ADQCIDSVNVKQR 359
D
Sbjct: 682 TDGSFTVSASGTT 694
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWS------SIGGYEKNMTI--AQHTVIESVVGSSGND 278
G ++L L+ ++L ++ + + I A T +++G +GND
Sbjct: 762 GVEMLTLSSTNTTSQTVNLGSDGVNSEVTVIDASAATGGVYINAAPRTTGLTLIGGAGND 821
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+G+ N+ G + DG G DT Y + + + + + D L
Sbjct: 822 QFLGSLGNDTITGGGGTNSMDGGGGTDTVSYGSMTSGITASIDGTSATITHST--GTDSL 879
Query: 339 SDVERLRFAD 348
++V L+ ++
Sbjct: 880 TNVAILQGSN 889
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 1/126 (0%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G++GND ++G + ++ +G + G SG DTF A + + N
Sbjct: 1101 ITGTTGNDTLVGGAGDDTLAGGAGTNTLSGGSGSDTFVLDAGATSTAVITDFNTAADNVT 1160
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L L + + + + D + I + H
Sbjct: 1161 LSNASFGLGSSGTLNNGVNYAEGTTTISGAAQNFGSG-TDGVVAIQNGANVEVWHTTNMA 1219
Query: 391 LSEGRD 396
++ +
Sbjct: 1220 AADNTN 1225
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 22/187 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN--TESWSSIGGYEKNMTIAQH 265
+ + LD ID + + ++ GG N +
Sbjct: 431 DFFGISGADTLVFEVATGTQSVTLDAYAASAGVTRIDASGASGGVANTGGVTVNASAYST 490
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSG-LDTFFYYAPSYL 315
V S+ G SG D G S + F GNDV DG +G D A ++
Sbjct: 491 AV--SISGGSGADTFTGGSGADSFVGGGGNDVIHAASNDALIDGGAGTADVLSVDAVNFD 548
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + N + +F DQ +I +++ +
Sbjct: 549 DGLGNNGQIVNIETINITNATTAG--QWFKFDDQS------DGFTINVTSSANVTVQGSQ 600
Query: 376 GQDVFES 382
G D+
Sbjct: 601 GNDIING 607
>gi|13027664|gb|AAG34676.2|AF306662_1 matrix metalloprotease MT1-MMP [Cricetulus griseus]
Length = 582
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDVFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|18413635|dbj|BAA82707.2| membrane-type-4 matrix metalloproteinase [Homo sapiens]
Length = 606
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSI-HSDIKFI 82
P LS+ + +P + R +AL WS + L F E + +DI+
Sbjct: 132 APTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQID 191
Query: 83 SS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALH 126
S N+GY + + +FD + W + G L A+H
Sbjct: 192 FSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 251
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 252 EFGHAIGLSH 261
>gi|330984908|gb|EGH83011.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 1610
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G +G D + +
Sbjct: 1452 TLKGT--ENLTGSQFADALTGNKNANVLNGGSGNDTLSGGAGDDVLIGGSGADTLIGGTG 1509
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+ + ++NE L D+
Sbjct: 1510 ADRYVFNNSNETGLGGLRDI 1529
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ +V D
Sbjct: 447 YRTATTSATDLVTD 460
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 5/133 (3%)
Query: 232 DLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D T ++ I++ + ++ G E + ++++G G+D + G++ ++
Sbjct: 772 DATGASVADSFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIIN 831
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D G G DTF Y + Y+ Y A + DF +++ +
Sbjct: 832 GGAGRDALYGGDGADTFVYSTLTDSYRDYDAGG----LTATDTIYDFTPGQDKIDVSALG 887
Query: 351 IDSVNVKQRSILE 363
+ + L
Sbjct: 888 FLGLGNGEDHTLY 900
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S +D ++G++ N+V G D G G D + + +
Sbjct: 1227 NIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + ++++ AS L G D+
Sbjct: 1287 VSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTG 1340
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G K+ A H + + V+ G++G D + G N+V ++G D +G +G D
Sbjct: 514 GLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMNGNAGTDRINGGAGADLINGG 573
Query: 311 APSYLYKIYRFENAII 326
A + + + I
Sbjct: 574 ADADILTGGAGGDLFI 589
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW----- 250
+ G NI+ T+ S G+D+LD + GG N I + +
Sbjct: 1223 NEGGNIFGTSDDD-------TLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTE 1275
Query: 251 -----SSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGN 295
S + +++ +E+ + +GN +V+ GN++NNV ++G
Sbjct: 1276 SNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGA 1335
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D+++ + + I ++ +++E +
Sbjct: 1336 DLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAA 1395
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ L Y + ++++ +
Sbjct: 1396 NATGNTLDNLIYAGAGDNVMDGRDGN 1421
>gi|221107524|ref|XP_002170324.1| PREDICTED: similar to matrix metalloproteinase, partial [Hydra
magnipapillata]
Length = 464
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 74/223 (33%), Gaps = 45/223 (20%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTF-----EE 72
R + ++ ++ + +T L+ + L+ + + A +W V +L F
Sbjct: 69 RKRRFTLQGSKWSKNNITWKLLNDNNDGLSRKEVETILENAFAKWEAVANLKFYKLDFTS 128
Query: 73 TSI-HSDIKFISSNNG-------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
+ D+KF+ N+G + P + Y +++F+ + G
Sbjct: 129 KAQADIDVKFVRGNHGDGIPFQPWHYIYAHAFFPLNNEGYSGDVHFNDVYNFNVKERNGV 188
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HEIGH+LGL H S S+M + ++
Sbjct: 189 NLYWVAIHEIGHSLGLYHS-------------------SVQNSLMYPYYKGTKDLNIQLH 229
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
DI+ +Q +YG+ Q T
Sbjct: 230 ------EDDILGIQNLYGSKPVLTSKKTPDTNNTQVTQNKTHT 266
>gi|146305757|ref|YP_001186222.1| hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
gi|145573958|gb|ABP83490.1| Hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
Length = 851
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + + G G+D + G + +++ F +GND+ DG G+DT +
Sbjct: 316 LFGGAGNDKITGNAGSDELYGGDGDDQLFGLAGDDLLFGGAGNDLLDGGKGVDTMVGGSG 375
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
IY ++ + N+H D D
Sbjct: 376 DD---IYILDDHRELERINQHGSDIYHD 400
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 13/205 (6%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGV 239
+ +I VQ I P LGN ++ + + G+D D +
Sbjct: 427 LLEIENVQLIGAGPFEVLGN---GLDNRLDAGRGASVLRGGAGNDTYIVGHKDAKVFEAA 483
Query: 240 KNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
ID S S ++G +N+T+ + + G+ ++++IGN NN+ +G D
Sbjct: 484 NEGIDTVLASVSFTLGANLENLTLLGKAAL-NGTGNELSNLLIGNDGNNILDGGTGADRM 542
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVK 357
+G G DT+ + + + I ++VE L ID +
Sbjct: 543 EGGKGNDTYIVDHEDDV--VVENDKEGIDTVKASVTYTLGANVENLILTGSGDIDGSGNE 600
Query: 358 QRSILEYTASYEDLIQVIGQDVFES 382
+ + L G D
Sbjct: 601 LNNAITGNDKDNRLDGGAGVDKLAG 625
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 25/166 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNTESWSSIG 254
GN+ Y +++ QK + T G D L+L + T + S
Sbjct: 628 GNDTYVVDLIQKGTGDKATAVLEDSIVEKANEGTDTLELRSDRLPSEF----TGTASITL 683
Query: 255 G--YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD----------GSS 302
G E + ++ G++ N+ + GN+ +N+ +GND+ G +
Sbjct: 684 GANLENLDARNTGALKLTLTGNALNNEIWGNAGDNILNGGAGNDILHAGSGRNNILIGGT 743
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFA 347
G DT + ++ ++ + + DF ++L F+
Sbjct: 744 GADTMYGGVGDDTFRFTSLKDLGLGEGKQDEIHDFNKEGKDKLDFS 789
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 26/140 (18%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ Y ++ +D ++ D G D + + N +L I G
Sbjct: 547 GNDTYIVD--HEDDVVVEN--DKEGIDTVKASVTYTLGANVENLILTGSGDIDGS----- 597
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY---APSYLYKI 318
G+ N+ + GN +N +G D G G DT+ +
Sbjct: 598 -----------GNELNNAITGNDKDNRLDGGAGVDKLAGGKGNDTYVVDLIQKGTGDKAT 646
Query: 319 YRFENAIIVYDANEHKQDFL 338
E++I+ + D L
Sbjct: 647 AVLEDSIV--EKANEGTDTL 664
>gi|86139958|ref|ZP_01058523.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Roseobacter sp. MED193]
gi|85823376|gb|EAQ43586.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Roseobacter sp. MED193]
Length = 3377
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 69/201 (34%), Gaps = 24/201 (11%)
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + GDD+L + L+G + + + + G + +
Sbjct: 3122 SGTDLGDALVGAAGDDILSGHEGNDMLVGNAGDDMLFGGDGRDDMLGGDGADMLMGGAGS 3181
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG--LDTFFYYAPSYLYKIYRFENAII 326
++++G G+D++IG S +++ ++G+D F G+ G D ++ S + + +
Sbjct: 3182 DNIIGGDGDDMIIGGSGSDILMGNAGDDTFIGTDGDCNDIYYGGEGSDTIDMASVTSNLT 3241
Query: 327 VYDAN-----------EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
V N E +D + VE ++L+ +
Sbjct: 3242 VRLGNAGTDRGSVTTEEGGRDTIWSVENFVGGSGDDTIFASDAANVLDGGDGNNTFVFET 3301
Query: 376 GQDVFE------SMKHFYEFG 390
+ S +FG
Sbjct: 3302 AANAQGDHINGLSAGDLLQFG 3322
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 12/209 (5%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT---ESWSS-- 252
P + + I + D+ + D + + + G VK+ DL +
Sbjct: 3081 PVSNDDDTIDGGDSSDADTETPAS--DPSTEQSPNGSDEGLVKSGTDLGDALVGAAGDDI 3138
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G+E N + + + + G G D ++G ++ +G+D G G D +
Sbjct: 3139 LSGHEGNDMLVGNAGDDMLFGGDGRDDMLGGDGADMLMGGAGSDNIIGGDGDDMIIGGSG 3198
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S + ++ I D + + D E D + N+ R T
Sbjct: 3199 SDILMGNAGDDTFIGTDGDCN--DIYYGGEGSDTIDMASVTSNLTVRLGNAGTDRGSVTT 3256
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ G+D S+++F G D F S
Sbjct: 3257 EEGGRDTIWSVENFVGGS---GDDTIFAS 3282
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 7/149 (4%)
Query: 230 LLDLTLIGGVKNYIDL---NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D L+ G + Y +L N +GG ++ + +++ G +G+D++IG+S
Sbjct: 1422 TGDAPLVDGAREYDNLLKFNGGEHVVLGGTDQRDILVGGLGDDALWGGAGDDLLIGDSGV 1481
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER--L 344
N F GND+ G D F + I A + L +
Sbjct: 1482 NTFRGGDGNDII--KDGDDISFLHGEDGDDVISAGGGAAELIFGGRGNDAILMGRDDAKH 1539
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQ 373
FA D V + + +D I+
Sbjct: 1540 TFAGMGNDFVFGGSGADIVDGGEGDDWIE 1568
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 27/168 (16%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGY 256
G+ G++ + D Y G D +D+ + N + S
Sbjct: 3203 MGNAGDDTF----IGTDGDCNDIYYGGEGSDTIDMASVTSNLTVRLGNAGTDRGSVTTEE 3258
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN-------------DVFDGSSG 303
TI +E+ VG SG+D + + A NV GN D +G S
Sbjct: 3259 GGRDTIWS---VENFVGGSGDDTIFASDAANVLDGGDGNNTFVFETAANAQGDHINGLSA 3315
Query: 304 LDTFFYYAPSYLYKIYRFE----NAIIVYDANEHKQDFLSD-VERLRF 346
D + S + ++ + ++ + +E +S +E +F
Sbjct: 3316 GDLLQFGTGSDMLELTWGDADMQDSFSFSEGDEAGTTKISGSIEDEQF 3363
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 7/155 (4%)
Query: 215 DSPFIQTIYDSGGDDLL----DLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQH-TV 267
+ T G+D++ D++ + G I + I G N I
Sbjct: 1477 GDSGVNTFRGGDGNDIIKDGDDISFLHGEDGDDVISAGGGAAELIFGGRGNDAILMGRDD 1536
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ GND V G S ++ G+D +G G D L + +++
Sbjct: 1537 AKHTFAGMGNDFVFGGSGADIVDGGEGDDWIEGGDGFDFLVGDNNDNLGGSRVIGHDVLM 1596
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
AN++ S + L + ++ +
Sbjct: 1597 GGANDNDLHGESGDDILFQGEGTHVNLAELGYDWI 1631
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 13/116 (11%)
Query: 225 SGGDDLLD-LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G D L + ++ IDL T N I + + GS+G D +
Sbjct: 1862 GDGTDRLTGIEILRFADMEIDLRT-------NPANNGLIQGTGGNDVLDGSNGPDAIFAG 1914
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ ++ +GNDV G G DT + AP Y + + N+ D L
Sbjct: 1915 AGDDAINGLAGNDVIFGEGGSDTITWNAPLGGYDVVVGHGIV-----NDGGTDMLV 1965
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 15/118 (12%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D N I +N + + + + + + V G+D++ G + N++
Sbjct: 2033 DFAGTSLAPNTIYVNGTAGNEVIDFSGFTSTQRIVV----NAGDGSDIITGGAGNDILNA 2088
Query: 292 SSGNDVF-----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+G D DG +G DT+ + + D +
Sbjct: 2089 GAGRDEITWSVGGGSDVVDGGAGDDTYTINGDASDETFRVYAADSWTGAPLATGTDIV 2146
>gi|218439530|ref|YP_002377859.1| lipolytic protein G-D-S-L family [Cyanothece sp. PCC 7424]
gi|218172258|gb|ACK70991.1| lipolytic protein G-D-S-L family [Cyanothece sp. PCC 7424]
Length = 681
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 23/125 (18%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--------IESVVGSSGNDVVIG 282
+ IGG + DL+ + GY+K + ++ IE++ G+S ND +IG
Sbjct: 492 IAFVDIGGTLSEDDLSDGVHPNRKGYDKMGDLWYDSLVKKDNLFSIENITGTSFNDTLIG 551
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N++ N+ G+D+ G G D F Y + DF S +
Sbjct: 552 NNSANIITGGQGDDLLTGGEGADVFAYEKIGENFDT---------------ITDFTSGQD 596
Query: 343 RLRFA 347
L F+
Sbjct: 597 HLSFS 601
>gi|119490780|ref|ZP_01623112.1| hypothetical protein L8106_04039 [Lyngbya sp. PCC 8106]
gi|119453764|gb|EAW34922.1| hypothetical protein L8106_04039 [Lyngbya sp. PCC 8106]
Length = 1857
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 14/156 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG+D + T+ N + I G E N + + + G GND + G++
Sbjct: 1591 TGGNDDIKGTVNNDEINGL----GGDDKIEGKEGNDILNGGEGKDELKGDDGNDTLNGDA 1646
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ GND +G G D L + DA + K D + L
Sbjct: 1647 GDDKLDGQDGNDTLNGGEGQDELKGGKQDDL----------LNGDAGDDKLDGQDGNDTL 1696
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + K +L A + L D+
Sbjct: 1697 NGGEGQDELKGNKGDDLLNGDAGNDSLYGGEDNDIL 1732
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 54/162 (33%), Gaps = 9/162 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D L+ + D N + G E + + + G +G+D + G
Sbjct: 1637 DGNDTLNGDAGDDKLDGQDGNDT----LNGGEGQDELKGGKQDDLLNGDAGDDKLDGQDG 1692
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ G D G+ G D A + + +I D N Q L +++ L
Sbjct: 1693 NDTLNGGEGQDELKGNKGDDLLNGDAGNDSLYGGEDNDILIGVDPNS-TQAGLGEIDVLV 1751
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++ D + + Y +D + + + +
Sbjct: 1752 -GEKNKDRFVLGDSNQTYY---NDDTYYWFSSRLNQGLNDYA 1789
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 8/142 (5%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L + ++ N+ + + G+ ND + G ++ GND+ +G G
Sbjct: 1571 NLEVQQVATEPPNPGNVINGTG-GNDDIKGTVNNDEINGLGGDDKIEGKEGNDILNGGEG 1629
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRS 360
D + +A + D L+ E L+ Q
Sbjct: 1630 KDELKGDDGNDTL----NGDAGDDKLDGQDGNDTLNGGEGQDELKGGKQDDLLNGDAGDD 1685
Query: 361 ILEYTASYEDLIQVIGQDVFES 382
L+ + L GQD +
Sbjct: 1686 KLDGQDGNDTLNGGEGQDELKG 1707
>gi|307592035|ref|YP_003899626.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985680|gb|ADN17560.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 1744
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Query: 253 IGGYEKNMTIAQHTVIES---VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
I G N TI +E+ V G GND + N+ GND +G G +T Y
Sbjct: 899 IKGLAGNDTIQFINGVEAPGQVRGGDGNDNITTGKGNDFIDGGQGNDTLNGGEGNNTADY 958
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
++ N+ + QD LS+++ + + + + ++ L A
Sbjct: 959 SNSPNGVRVNL--NSGFASNDGYGTQDNLSNIQNVEGSAKNDVIIGSNTKNYLNGGAGN 1015
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 9/173 (5%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS-SGNDVVIGNSANNVF 289
D + G + S+ ++ G + + +++ SG+D + G N++
Sbjct: 1178 YDSSSGKGTPQEGN----SFENLEGSLYSDGELRGDDNNNLIRGLSGDDNIYGEGGNDLL 1233
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G D DG +G DT Y + N DA D S+VE L ++
Sbjct: 1234 NGGAGADHLDGGTGEDTVTYLESTGAVYADLLFNQGFFADAQG---DTFSNVEDLTGSNY 1290
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDITFDS 401
+ + ++ + S L V G+ + + + EG + F++
Sbjct: 1291 GDNLNGDNGNNKIDPSLSGSQLDIVDGRGGTDTLLVDYSIDDYGEGIEGGFNT 1343
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L++ +S+ N + + +++V +GND +I N+ N+ + GND + G
Sbjct: 1558 LDSIDFSNFE----NYQVTGTSKEDTIVLGNGNDSIIANAGNDYLRSNGGNDYINAGEGN 1613
Query: 305 DTFFYYAPS--YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
D + + + A + D A
Sbjct: 1614 DVLIGSNQTSADIDTLEGGAGADLFLLGESFVAGTNLDPHFYDKAGTN 1661
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 37/206 (17%)
Query: 227 GDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI-GN 283
G D L DL+ + + SS Y I+ + + + SGND + +
Sbjct: 1412 GIDTLSDDLSNKTQNISLESFDITQESSKSYYIDGTNISNFEIFKDIKTGSGNDRLTQLD 1471
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPS------------------YLYKIYRFENAI 325
NN F +G D +G G D+ + Y + + +
Sbjct: 1472 RINNNFSTGAGADTVNGGLGFDSVDGGKDTVFLPDLGEIELPVIDTLVVDYSVGDTGSGM 1531
Query: 326 IVYDANEHKQDFLS------DVE-----RLRFAD-QCIDSVNVKQRSILEYTASYEDLIQ 373
I++ E K + ++E + F++ + + + + +I
Sbjct: 1532 IMFVTPEDKTGYAYRSIDPNNIEASLLDSIDFSNFENYQVTGTSKEDTIVLGNGNDSIIA 1591
Query: 374 VIGQD--VFESMKHFYEFGLSEGRDI 397
G D + G EG D+
Sbjct: 1592 NAGNDYLRSNGGNDYINAG--EGNDV 1615
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 10/166 (6%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG + D+ L+ +++I +++A +S++G SGNDV+ +
Sbjct: 1339 GGFNTGDIKHYADSSKTSVLDQVGFTNIES----LSVAGTIRNDSIIGGSGNDVLRMSDG 1394
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF--LSDVER 343
N+ GND+ DG G+DT + I I + + D +S+ E
Sbjct: 1395 NDFVDGGGGNDLLDGDRGIDTLSDDLSNKTQNISLESFDITQESSKSYYIDGTNISNFEI 1454
Query: 344 L----RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + + + A + + +G D + K
Sbjct: 1455 FKDIKTGSGNDRLTQLDRINNNFSTGAGADTVNGGLGFDSVDGGKD 1500
>gi|114652047|ref|XP_001157506.1| PREDICTED: matrix metalloproteinase 14 isoform 1 [Pan troglodytes]
Length = 589
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 126 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 178
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 179 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 238
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 239 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 275
>gi|74147434|dbj|BAE42564.1| unnamed protein product [Mus musculus]
Length = 465
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 62/209 (29%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
D LL W++ + Y+ T ++ + A WS
Sbjct: 93 VPDSGDFLLTPGSPKWTHTNLTYRIINHTPQLSRAEV-------KTAIEKAFHVWSVASP 145
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF E +DI +N P + +FD + W
Sbjct: 146 LTFTEILQGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWT-Q 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
K L A HE GH+LGL H YP Y Y S +Y +PQD
Sbjct: 205 DSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSLPQD-- 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI VQ IYG
Sbjct: 253 --------------DINGVQTIYGPSDNP 267
>gi|113474356|ref|YP_720417.1| peptidase S8/S53 subtilisin kexin sedolisin [Trichodesmium
erythraeum IMS101]
gi|110165404|gb|ABG49944.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Trichodesmium
erythraeum IMS101]
Length = 577
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 9/126 (7%)
Query: 226 GGDDLLDLTL----IGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G+D + +L I G + ++ S S + G N I + V G G D V
Sbjct: 50 DGNDTIIGSLSPELINGNQGNDNIFGGSGSDTLRGGRGNDFIEADQGNDQVFGDLGKDTV 109
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE----HKQD 336
G N+ + G D+ G +G DT + + ++ D+ D
Sbjct: 110 YGEIGNDQIYGGKGEDILFGGNGNDTIYGDLGKDTLIGEAGNDIFVLRDSPNNNNLDTAD 169
Query: 337 FLSDVE 342
+ D
Sbjct: 170 IIYDFN 175
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 9/121 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G L ++L + + + N TI E + G+ GND + G S +
Sbjct: 20 GISYLLDNNHNQFTVPVNLLIPYSAGLQALDGNDTIIGSLSPELINGNQGNDNIFGGSGS 79
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYL-------YKIYRFENAIIVYDANEHKQDFLS 339
+ GND + G D F +IY + I++ N D +
Sbjct: 80 DTLRGGRGNDFIEADQGNDQVFGDLGKDTVYGEIGNDQIYGGKGEDILFGGN--GNDTIY 137
Query: 340 D 340
Sbjct: 138 G 138
>gi|256827826|ref|YP_003156554.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256577002|gb|ACU88138.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 2336
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 9/148 (6%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + ++ H + ++G G D ++GN N+V G+D +G+ G D + A +
Sbjct: 2131 GDAGSNSLYGHEGDDILLGLGGTDTLMGNDGNDVLHGGDGDDFLNGNKGEDQLYGDAGND 2190
Query: 315 L-----YKIYRFENAIIVYDANEHKQDFLSDVE---RLRFA-DQCIDSVNVKQRSILEYT 365
+ + + D +S E ++A D ++ N +Y
Sbjct: 2191 TIHGGMDDDVIYGGSGDDLIYGDKGDDTMSGGEGRDVFKYAGDALENTTNGDVILDFDYD 2250
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSE 393
DL ++ + + + + E
Sbjct: 2251 KDQLDLSDLLNGKDADGLGDYLKIESFE 2278
>gi|300940562|ref|ZP_07155131.1| type 1 secretion target domain protein [Escherichia coli MS 21-1]
gi|300454684|gb|EFK18177.1| type 1 secretion target domain protein [Escherichia coli MS 21-1]
Length = 3630
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 3406 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 3459
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 3460 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 3519
Query: 319 YRFENAII 326
+ ++
Sbjct: 3520 GGNGSDVV 3527
>gi|254465770|ref|ZP_05079181.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
gi|206686678|gb|EDZ47160.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
Length = 833
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 6/130 (4%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ GDD + + +L G+ N + E ++ + ++ +
Sbjct: 324 GGDGGDTLSGGDGDDYIEGGAGNDSLTTGLGNDTLIGGEGDDTLRNSAGDDSLVGGVGND 383
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVY 328
S++ + GND + G N+ + + ND+ G +G D + A + +K+ F N +
Sbjct: 384 SIIATDGNDTLEGGDGNDTMYGGNDNDLLVGGAGDDLMYGEADADTFKMSDGFGNDTLEG 443
Query: 329 DANEHKQDFL 338
+ D L
Sbjct: 444 GEAGNDYDTL 453
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 66/210 (31%), Gaps = 24/210 (11%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
+Q G +L ++ + V T+ G+D++ + L G N
Sbjct: 245 TLQTRDGLAGFTLSGDVIEDAVVTPIEQGNDTVLAGDGNDVVYGQGGNDVLYGEAGNDSM 304
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + G T+ +++ G G+D + G + N+ GND G G
Sbjct: 305 EGGDGDDVLDGGAGADTLIGGDGGDTLSGGDGDDYIEGGAGNDSLTTGLGNDTLIGGEGD 364
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT A ++II D N D L + +
Sbjct: 365 DTLRNSAGDDSLVGGVGNDSIIATDGN----DTLEGGD---------------GNDTMYG 405
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ L+ G D+ F +S+G
Sbjct: 406 GNDNDLLVGGAGDDLMYGEADADTFKMSDG 435
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 9/170 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ GDD L D +L+GGV N + T+ ++ G + N T+
Sbjct: 346 NDSLTTGLGNDTLIGGEGDDTLRNSAGDDSLVGGVGNDSIIATDGNDTLEGGDGNDTMYG 405
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ +VG +G+D++ G + + F + GND +G + + S +
Sbjct: 406 GNDNDLLVGGAGDDLMYGEADADTFKMSDGFGNDTLEGGEAGNDYDTLNLSDVTTGVTVT 465
Query: 323 NAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYED 370
D ++ +E L DQ + + A D
Sbjct: 466 YTGDEAGTITDGSDTITFSEIELLNLTDQGDIVDASADSAGVTIDAGKGD 515
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 28/166 (16%)
Query: 194 IYGAPKGSL-----GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+YG L G+++ E D G+D L+ G + ++L+
Sbjct: 403 MYGGNDNDLLVGGAGDDLMYGEADADTFKMS----DGFGNDTLEGGEAGNDYDTLNLSDV 458
Query: 249 SWSSIGGYEKN----MTIAQHTV----IESVVGSSGND-----------VVIGNSANNVF 289
+ Y + +T T+ IE + + D + ++
Sbjct: 459 TTGVTVTYTGDEAGTITDGSDTITFSEIELLNLTDQGDIVDASADSAGVTIDAGKGDDTI 518
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+G+D+ G G D + F D + Q
Sbjct: 519 TMGAGDDLITGGEGYDQLILTGGGGTDTVSDFSVGDDDSDGFYNDQ 564
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 4/105 (3%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+I S G++ +D++ G + ++ +G D G G D + +
Sbjct: 9 DLIASKTGTADDDLMDGTTGDDTIDAGAGQDTVAGEEGSDIIDAGEGDD----VVYGDMG 64
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ + D+ ++ + + +I A ED
Sbjct: 65 DGFEQGADASPLVLDINNIQTVSHDGYTGSAGDYAIFSDIAVLED 109
>gi|153822205|ref|ZP_01974872.1| hypothetical protein A5E_1919 [Vibrio cholerae B33]
gi|229511494|ref|ZP_04400973.1| hypothetical protein VCE_002903 [Vibrio cholerae B33]
gi|229607841|ref|YP_002878489.1| hypothetical protein VCD_002755 [Vibrio cholerae MJ-1236]
gi|126520273|gb|EAZ77496.1| hypothetical protein A5E_1919 [Vibrio cholerae B33]
gi|229351459|gb|EEO16400.1| hypothetical protein VCE_002903 [Vibrio cholerae B33]
gi|229370496|gb|ACQ60919.1| hypothetical protein VCD_002755 [Vibrio cholerae MJ-1236]
Length = 2137
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 1834 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 1888
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 1889 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 1948
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 1949 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 2008
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 2009 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 2061
>gi|121590793|ref|ZP_01678121.1| hypothetical protein VC274080_1679 [Vibrio cholerae 2740-80]
gi|121547356|gb|EAX57472.1| hypothetical protein VC274080_1679 [Vibrio cholerae 2740-80]
Length = 1512
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 1209 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 1263
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 1264 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 1323
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 1324 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 1383
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 1384 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 1436
>gi|396666|emb|CAA68613.1| unnamed protein product [Bordetella pertussis 18323]
Length = 1706
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G D +D + G L+ +
Sbjct: 1454 RLYGE----AGDD----WFFQDAANAGNLLDGGDGRDTVDFSGPGRG-----LDAGAKGV 1500
Query: 250 WSSIGGYEKNMTIAQHTV-----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS+ +DV+IG++ NV +GNDV G +G
Sbjct: 1501 FLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGD 1560
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + +N
Sbjct: 1561 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYE----SGGGHDTIRINAG 1616
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1617 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1646
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S + G D D V+N ++ S IG + N + Q
Sbjct: 1227 YGFGIEADLSREWVRKASALGVDYYD-----NVRNVENVIGTSMKDVLIGDAQANTLMGQ 1281
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V G G+D++ G N++ + +GND G G DT A + + +
Sbjct: 1282 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREH 1340
Query: 325 IIVYDANEHKQDFL 338
++ D +
Sbjct: 1341 DVLRGG--DGVDTV 1352
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N SG+D DG +G DT ++ +
Sbjct: 1010 VQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQ 1069
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 1070 DLGVWSNQLDGGAGVDTVKY 1089
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 26/152 (17%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 1304 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQT 1357
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGSSGNDVVIGNSA 285
G I L + +G + + A TV IE+VVG+ D + G++
Sbjct: 1358 GAHAGIAAGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 1415
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
NV + G DV G G D
Sbjct: 1416 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLS 1447
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 15/193 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 1063 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 1122
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GS ND + G+ +N + GND G G D L
Sbjct: 1123 -NLFSVDHVKNIENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLG--LD 1179
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D + + EY E DL +
Sbjct: 1180 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREW 1239
Query: 376 GQDVFESMKHFYE 388
+ +Y+
Sbjct: 1240 VRKASALGVDYYD 1252
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + + G +GND ++G N +G+DV DG
Sbjct: 1021 SITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDG 1080
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 1081 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSR 1140
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
Q + L + + G D+
Sbjct: 1141 LNDRIAGDDQDNELWGHDGNDTIRGRGGDDIL 1172
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G SG+D + G + N+ G + G +G D F +
Sbjct: 1015 GGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVW 1074
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 1075 SNQLDGGAGVDTV 1087
>gi|33591934|ref|NP_879578.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis Tohama I]
gi|34978355|sp|P15318|CYAA_BORPE RecName: Full=Bifunctional hemolysin/adenylate cyclase; AltName:
Full=AC-HLY; AltName: Full=ACT; AltName: Full=Cyclolysin;
Contains: RecName: Full=Calmodulin-sensitive adenylate
cyclase; AltName: Full=ATP pyrophosphate-lyase; AltName:
Full=Adenylyl cyclase; Contains: RecName: Full=Hemolysin;
Flags: Precursor
gi|33571578|emb|CAE41066.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis Tohama I]
gi|66820294|gb|AAY57201.1| adenylate cyclase toxin [Bordetella hinzii LMG 13501]
gi|71979945|gb|AAZ57194.1| adenylate cyclase toxin [Bordetella hinzii BC-306]
gi|332381351|gb|AEE66198.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis CS]
Length = 1706
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G D +D + G L+ +
Sbjct: 1454 RLYGE----AGDD----WFFQDAANAGNLLDGGDGRDTVDFSGPGRG-----LDAGAKGV 1500
Query: 250 WSSIGGYEKNMTIAQHTV-----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS+ +DV+IG++ NV +GNDV G +G
Sbjct: 1501 FLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGD 1560
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + +N
Sbjct: 1561 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYE----SGGGHDTIRINAG 1616
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1617 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1646
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S + G D D V+N ++ S IG + N + Q
Sbjct: 1227 YGFGIEADLSREWVRKASALGVDYYD-----NVRNVENVIGTSMKDVLIGDAQANTLMGQ 1281
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V G G+D++ G N++ + +GND G G DT A + + +
Sbjct: 1282 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREH 1340
Query: 325 IIVYDANEHKQDFL 338
++ D +
Sbjct: 1341 DVLRGG--DGVDTV 1352
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N SG+D DG +G DT ++ +
Sbjct: 1010 VQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQ 1069
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 1070 DLGVWSNQLDGGAGVDTVKY 1089
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 26/152 (17%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 1304 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQT 1357
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGSSGNDVVIGNSA 285
G I L + +G + + A TV IE+VVG+ D + G++
Sbjct: 1358 GAHAGIAAGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 1415
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
NV + G DV G G D
Sbjct: 1416 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLS 1447
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 15/193 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 1063 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 1122
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GS ND + G+ +N + GND G G D L
Sbjct: 1123 -NLFSVDHVKNIENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLG--LD 1179
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D + + EY E DL +
Sbjct: 1180 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREW 1239
Query: 376 GQDVFESMKHFYE 388
+ +Y+
Sbjct: 1240 VRKASALGVDYYD 1252
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + + G +GND ++G N +G+DV DG
Sbjct: 1021 SITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDG 1080
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 1081 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSR 1140
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
Q + L + + G D+
Sbjct: 1141 LNDRIAGDDQDNELWGHDGNDTIRGRGGDDIL 1172
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G SG+D + G + N+ G + G +G D F +
Sbjct: 1015 GGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVW 1074
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 1075 SNQLDGGAGVDTV 1087
>gi|281343370|gb|EFB18954.1| hypothetical protein PANDA_015650 [Ailuropoda melanoleuca]
Length = 554
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 113 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 172
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 173 AYFPGPNIGGDTHFDSAEPWTVRNEDVNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 232
Query: 149 VDNDYEN 155
D EN
Sbjct: 233 QWMDTEN 239
>gi|45443232|ref|NP_994771.1| putative virulence determinant [Yersinia pestis biovar Microtus str.
91001]
gi|45438100|gb|AAS63648.1| putative virulence determinant [Yersinia pestis biovar Microtus str.
91001]
Length = 3110
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G+D + + G + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVAQGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYL 315
Sbjct: 2291 GLAQ 2294
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 66/199 (33%), Gaps = 38/199 (19%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIG-GYEKNM--TIAQHTVIESVVGSSGNDVVIGNSA-- 285
L +T G Y D T ++ +KN IA ++ V SSGND V+ SA
Sbjct: 2594 LKITDKSGQSQYRDPVTGTFIDYQINLDKNGHPFIAAQ---QAPVVSSGNDEVVITSATF 2650
Query: 286 --NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N GND + G G DT++Y A S I A+
Sbjct: 2651 LPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI-----------ADT 2699
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L N +I + T+ + D + EF
Sbjct: 2700 SGLDHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIW 2754
Query: 392 SEGRDITFDSYLYLGSYDD 410
E ITFD L Y D
Sbjct: 2755 VEDSQITFDELFSLRPYSD 2773
>gi|54311164|gb|AAH45610.1| MMP17 protein [Homo sapiens]
Length = 606
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSI-HSDIKFI 82
P LS+ + +P + R +AL WS + L F E + +DI+
Sbjct: 132 APTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQID 191
Query: 83 SS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALH 126
S N+GY + + +FD + W + G L A+H
Sbjct: 192 FSKANHNDGYPFDGPGGTVAHAFFPGHHNTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 251
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 252 EFGHAIGLSH 261
>gi|261211742|ref|ZP_05926029.1| rTX toxin putative [Vibrio sp. RC341]
gi|260839092|gb|EEX65724.1| rTX toxin putative [Vibrio sp. RC341]
Length = 1924
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 38/208 (18%)
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H G N Y D+ + + S +S S + M +D++
Sbjct: 1678 HSGDSN----DYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVI------ 1727
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + + VQ + P T+ G+D + G
Sbjct: 1728 -----TDDDGVLLQSVQSQIQPITDTVNLGRGNDT----------------------VYG 1760
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ ++++G GND + G + N+ GNDV G SG D S +
Sbjct: 1761 GGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLSGGRGNDVLRGDSGNDVLIGGLGSDI 1820
Query: 316 YKIYRFENAIIVYDAN-EHKQDFLSDVE 342
E+ D + + D ++D
Sbjct: 1821 LTGDSGEDLFKWVDGDLDGSTDRITDFH 1848
>gi|149202805|ref|ZP_01879777.1| alkaline phosphatase [Roseovarius sp. TM1035]
gi|149144087|gb|EDM32121.1| alkaline phosphatase [Roseovarius sp. TM1035]
Length = 1423
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E N ++ ++V+G +G+D V G ++V +GND +G SG D
Sbjct: 1290 LDGGEGNDSLGGGLGDDTVLGGAGDDFVAGGGRDDVLDGGAGNDTLNGGSGNDLMTGGEG 1349
Query: 313 SYLYKIYRFENA----IIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + I +DA+ ++ + L D +V + + A
Sbjct: 1350 VDTFVFNTLTSGEADIITDFDASTETVILRSVASFDTLDITDTVAGAVVAVDGQTITFEA 1409
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 14/188 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+N+ S T+ + GDD+ G + ++ + ++GG N T+
Sbjct: 1164 DNLGVDSSPTGRSDGDDTLVGTDGDDVF---GAGAGDDLVNGGAGND-NLGGGFGNDTVN 1219
Query: 264 QHTVIESVVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-----K 317
+++ G+D ++ + N+V +GND+ G G D +
Sbjct: 1220 GGAGNDTIGAGLGDD-IVNGGAGNDVANGGAGNDLVRGEDGNDRLGGGQGADTVEGGTGD 1278
Query: 318 IYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ A D L + + + +L+ A + L
Sbjct: 1279 DFIGGGAGTDLLDGGEGNDSLGGGLGDDTVLGGAGDDFVAGGGRDDVLDGGAGNDTLNGG 1338
Query: 375 IGQDVFES 382
G D+
Sbjct: 1339 SGNDLMTG 1346
>gi|301020394|ref|ZP_07184498.1| type 1 secretion target domain protein [Escherichia coli MS 69-1]
gi|300398782|gb|EFJ82320.1| type 1 secretion target domain protein [Escherichia coli MS 69-1]
Length = 4967
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 4743 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 4796
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 4797 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 4856
Query: 319 YRFENAII 326
+ ++
Sbjct: 4857 GGNGSDVV 4864
>gi|307155175|ref|YP_003890559.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985403|gb|ADN17284.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 469
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 5/151 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D L+ GG +N ++ G + N T+ T +
Sbjct: 223 NDSLSGDAGNDTLNGGAGNDTLN----GGTENDSLSGDAGIDTLNGGDGNDTLNGDTEND 278
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +GND + G + ++ +G D G +G D + +N ++
Sbjct: 279 KLNGEAGNDTLNGGAGDDYLNGGAGTDTLYGGAGKDNLNGDLQNDRLY-GDEDNDTLIGG 337
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + + +R FA+Q ID++ +
Sbjct: 338 SGDDTLTGGTQTDRFVFANQGIDTITDFSVN 368
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 9/159 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D +L+ G+ L + S+ G +N +++ I++++G GND + G +
Sbjct: 167 GGND--NLSGDAGIDTL--LGGDGNDSLNGGTENDSLSGDAGIDTLLGGDGNDNLSGGTE 222
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ +GND +G +G DT + + I + + D E +
Sbjct: 223 NDSLSGDAGNDTLNGGAGNDTLNGGTENDSLS---GDAGIDTLNGGDGNDTLNGDTENDK 279
Query: 346 FADQCIDSV--NVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + L A + L G+D
Sbjct: 280 LNGEAGNDTLNGGAGDDYLNGGAGTDTLYGGAGKDNLNG 318
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 4/172 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I T+ G+D L GG +N ++ G N T+ T +
Sbjct: 196 NDSLSGDAGIDTLLGGDGNDNLS----GGTENDSLSGDAGNDTLNGGAGNDTLNGGTEND 251
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G +G D + G N+ + ND +G +G DT A + +
Sbjct: 252 SLSGDAGIDTLNGGDGNDTLNGDTENDKLNGEAGNDTLNGGAGDDYLNGGAGTDTLYGGA 311
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ L + D ++ T + + G D
Sbjct: 312 GKDNLNGDLQNDRLYGDEDNDTLIGGSGDDTLTGGTQTDRFVFANQGIDTIT 363
>gi|188595815|pdb|2K2G|A Chain A, Solution Structure Of The Wild-Type Catalytic Domain Of
Human Matrix Metalloproteinase 12 (Mmp-12) In Complex
With A Tight-Binding Inhibitor
Length = 165
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 58/189 (30%), Gaps = 49/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 11 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 63
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 64 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 122
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 123 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 156
Query: 188 IVAVQKIYG 196
I +Q +YG
Sbjct: 157 IRGIQSLYG 165
>gi|331651431|ref|ZP_08352456.1| putative RTX family exoprotein [Escherichia coli M718]
gi|331051172|gb|EGI23224.1| putative RTX family exoprotein [Escherichia coli M718]
Length = 2673
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 2449 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 2502
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 2503 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLHYKLLNASDAT 2562
Query: 319 YRFENAII 326
+ ++
Sbjct: 2563 GGNGSDVV 2570
>gi|291383991|ref|XP_002708467.1| PREDICTED: matrix metalloproteinase 8 [Oryctolagus cuniculus]
Length = 408
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 52/176 (29%), Gaps = 43/176 (24%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEE-TSIHSDIKFISSNNGYVCTPRYDSRYFM------ 100
+ + A G WS V LTF +DI + + +D +
Sbjct: 69 TSDVESAIERAFGVWSAVSPLTFTRIVQGEADINIAFAQGDHGDISPFDGPNGILAHAFQ 128
Query: 101 -------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ +FD + W + L A HE GH+LGL H PV + +Y
Sbjct: 129 PGQGIGGDAHFDAEETWT-KTSRNYNLFIVAAHEFGHSLGLAHS-----SNPVALMYPNY 182
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK---GSLGNNI 206
F + DI +Q +YG+ G
Sbjct: 183 I-----------FREPSTFSLPQ---------DDINGIQALYGSSNRPIQPTGATT 218
>gi|163796643|ref|ZP_02190602.1| glutamyl endopeptidase [alpha proteobacterium BAL199]
gi|159178203|gb|EDP62748.1| glutamyl endopeptidase [alpha proteobacterium BAL199]
Length = 444
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 82/280 (29%), Gaps = 48/280 (17%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ F ++ Y + VW Y GT H
Sbjct: 155 AGGTASFAFGNNIYYSDTLDTYGGQSGSP-------VWWYDSTTGTRTVIGV-----HTF 202
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLT----SVMSYFMPQDSMMDAS-----FGYCATP 183
G GSY G + D D++ SVM+ D + S +GY +
Sbjct: 203 G----GSYYNGGTLLTDDFKDLVDAWTADSDGSVMTGSDTADVISGTSASDVMYGYSGSD 258
Query: 184 MVSDIVAVQKIYGAPKGSL------GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+S IYG + L + IY + S + D G
Sbjct: 259 TLSGGAGDDLIYGNYETDLLIGGSGSDTIYGGQNNGPASTGNGSASD------------G 306
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ E +I G + + + + + G SG+D + G + +G+D
Sbjct: 307 VSRQR-----EGLETISGGDGGDVLYGNYGSDLLYGGSGDDRLFGGQDADTLSGGAGSDT 361
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G+ G D A S ++ + + ++
Sbjct: 362 LYGNRGDDVLVGGAGSDVFVLTGTGTDTVNDFSSAEGDRI 401
>gi|149633237|ref|XP_001508976.1| PREDICTED: similar to matrix metalloproteinase-3 [Ornithorhynchus
anatinus]
Length = 476
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 65/192 (33%), Gaps = 51/192 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF---EETSIHSDI 79
W+ + + Y+ + T D+ + + A WS+V LTF E I
Sbjct: 113 WNKHDLTYRIENYTPDLSQADV-------EFCIQKAFQVWSEVTPLTFKKINEGQADIMI 165
Query: 80 KFISSNNGYVCT-----PRYDSRYFMEI------NFDKADVWRYGIGKGTILSHNALHEI 128
F S +G Y+ I +FD+ + W + L A HE
Sbjct: 166 SFASGAHGDFYPFDGPEGTLAHAYYPGIGIGGDAHFDEDETWSKDSRRYN-LFIVAAHEF 224
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--S 186
GH+LGL+H + S+M P S D T +
Sbjct: 225 GHSLGLLHS-------------------NVPQSLM---FPHYSDSD-----PNTFQLHQD 257
Query: 187 DIVAVQKIYGAP 198
DI +Q +YG P
Sbjct: 258 DINGIQMLYGRP 269
>gi|261363852|ref|ZP_05976735.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria mucosa ATCC 25996]
gi|288568446|gb|EFC90006.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria mucosa ATCC 25996]
Length = 885
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Query: 188 IVAVQKIYG----APKGSLGNNIY-KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
I + Q ++G A G+ N Y + + + + + + G ++ G +
Sbjct: 6 IPSTQHMHGVSTSADTGNTNNGTYIRSNISRTLAAGEKNLILEGDANIF---GAGNNGDN 62
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + + + N T+ +++ G G D++ G ++ +G+D+ +G +
Sbjct: 63 ILIGNSGRNRLNSGRGNDTVYGGGGDDTINGGEGFDLLFGEDGDDTLNGEAGDDILNGGA 122
Query: 303 GLDTFFYYAPSYLYKIYRFEN 323
G DT+ + A I E
Sbjct: 123 GNDTYIFSAAGGRDTIIDTEG 143
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 3/115 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ +DV+ G+ N+ +G D G G DT++ + I + A
Sbjct: 231 INGTDSDDVLNGSDGNDTIDGKAGADTMSGGWGDDTYYVDNVKDV--IIEGKGAGTDTVI 288
Query: 331 NEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++VE + I +IL A + L G D M
Sbjct: 289 SSVSYTAATNVENVTLTGNANIFGAGNNSDNILTGNAGHNRLNSGRGNDTVYGMG 343
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESV----VGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
N S I G ++ + ++ G+ +D + G N+ + G+D DG
Sbjct: 502 NDTIDSGIDGRDRLYGLGGDDILRDSGTSYFGNERDDELYGGDGNDKLYADVGDDYLDGG 561
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G D Y + ++D N +
Sbjct: 562 AGDDHLEGGQHRDTYVFGKGYGHDTIFDYNFN 593
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 34/95 (35%), Gaps = 5/95 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D +D + G + Y + + + + + G GND + + ++
Sbjct: 502 NDTIDSGIDGRDRLY-----GLGGDDILRDSGTSYFGNERDDELYGGDGNDKLYADVGDD 556
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+G+D +G DT+ + I+ +
Sbjct: 557 YLDGGAGDDHLEGGQHRDTYVFGKGYGHDTIFDYN 591
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 46/157 (29%), Gaps = 26/157 (16%)
Query: 225 SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKN-MTIAQHTVIES-VVGSSGNDVVI 281
G D + ++ N ++ ++I G N I + + GND V
Sbjct: 281 GAGTDTVISSVSYTAATNVENVTLTGNANIFGAGNNSDNILTGNAGHNRLNSGRGNDTVY 340
Query: 282 GNSANNVFF------------------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G N+ +GND G G DT A + Y +
Sbjct: 341 GMGGNDNLNGGDGDDYLDGGEGNDNINGDAGNDTLIGGKGKDTLKGGAGNDTYIFGDDDT 400
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
I + + L + LR D I + Q
Sbjct: 401 II-----DNQGNNSLRFSDDLRIKDLKISVNDNAQGG 432
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 45/177 (25%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-----LNTESWSSIGGYEKNMTIAQHTVI 268
S TI G D + G Y+D + + +++ T +
Sbjct: 241 NGSDGNDTIDGKAGADTMSG-GWGDDTYYVDNVKDVIIEGKGAGTDTVISSVSYTAATNV 299
Query: 269 ESV----------VGSSGNDVVIGNSANNVFFESSGNDV---------F----------- 298
E+V G++ ++++ GN+ +N GND
Sbjct: 300 ENVTLTGNANIFGAGNNSDNILTGNAGHNRLNSGRGNDTVYGMGGNDNLNGGDGDDYLDG 359
Query: 299 -------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+G +G DT K + I D + LRF+D
Sbjct: 360 GEGNDNINGDAGNDTLIGGKGKDTLKGGAGNDTYIFGD--DDTIIDNQGNNSLRFSD 414
>gi|112382270|ref|NP_057239.4| matrix metalloproteinase-17 preproprotein [Homo sapiens]
gi|296439485|sp|Q9ULZ9|MMP17_HUMAN RecName: Full=Matrix metalloproteinase-17; Short=MMP-17; AltName:
Full=Membrane-type matrix metalloproteinase 4;
Short=MT-MMP 4; Short=MTMMP4; AltName:
Full=Membrane-type-4 matrix metalloproteinase;
Short=MT4-MMP; Short=MT4MMP; Flags: Precursor
Length = 603
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIHS-DIKFI 82
P LS+ + +P + R +AL WS + L F E + + DI+
Sbjct: 129 APTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQID 188
Query: 83 SS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALH 126
S N+GY + + +FD + W + G L A+H
Sbjct: 189 FSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 248
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 249 EFGHAIGLSH 258
>gi|309360782|emb|CAP30739.4| CBR-SRG-54 protein [Caenorhabditis briggsae AF16]
Length = 639
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 14/129 (10%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS-DI 79
+ W+ + YK I + A A +W++ F E++ + DI
Sbjct: 283 ELWTKKSLTYKIVNTPKTLSEARI-------RSAAHEAFAQWTRASGFKFVESTGQTPDI 335
Query: 80 KFISSNNGY-----VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + ++ ++ ++ G L H LHEIGH LGL
Sbjct: 336 TITFYDVPQSNLRIAGSASKPLNSHIILDKNQEWAYKSQAPMGISLYHTLLHEIGHVLGL 395
Query: 135 MHPGSYNGG 143
H Y G
Sbjct: 396 PHTF-YRGS 403
>gi|297269060|ref|XP_001097508.2| PREDICTED: matrilysin [Macaca mulatta]
Length = 270
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 71/215 (33%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W++ + Y+ T F + L AL W
Sbjct: 87 KPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHFTVDRL-------VSKALNMW 139
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F + +DI + + +D + +FD+ +
Sbjct: 140 GKEIPLHFRKVVWGTADIMIGFARGAHGDPYPFDGPGNTLAHAFAPGPGLGGDAHFDEDE 199
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFM 167
W G G + A HE+GH+LG+ H N YP YG
Sbjct: 200 RWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNG----------------D 243
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
PQ+ + DI +QK+YG S
Sbjct: 244 PQNFKLSQ----------DDIKGIQKLYGKRSNSR 268
>gi|147675379|ref|YP_001217171.1| cadherin domain-containing protein [Vibrio cholerae O395]
gi|146317262|gb|ABQ21801.1| cadherin domain protein [Vibrio cholerae O395]
gi|227013529|gb|ACP09739.1| RTX toxin [Vibrio cholerae O395]
Length = 2251
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 1948 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 2002
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 2003 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 2062
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 2063 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 2122
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 2123 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 2175
>gi|330861498|emb|CBX71713.1| hypothetical protein YEW_DL14740 [Yersinia enterocolitica W22703]
Length = 485
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA-QHTVI 268
V K T+ GDD+L G I + ++ G + +A Q ++I
Sbjct: 133 SVFIKGGRGNTTLVGGDGDDVL--AGGIGKNTIIGGSGKAVIYAGPQGDTIYVAEQGSII 190
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G D + G N+V GN + DG G++ + Y I R ++ +
Sbjct: 191 ---HAGGGADKIYGGKGNDVIEAGQGNALIDGGGGINVVSLHGTHADYIITRTDSGYQIR 247
Query: 329 D--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D A L ++++L F+D + ++
Sbjct: 248 DKVAGRDGTLALKNIQKLNFSDISAIDLQEDTIVPID 284
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 13/148 (8%)
Query: 196 GAPKG--SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-NTESWSS 252
G+ + G++++ I +GG D + ++G +++ + +
Sbjct: 64 GSNTYVGNRGDDVFVISASDDPKNIK----GNGGRDTV--LIVGKKAVTLNMARSGVTLA 117
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
GG ++ I+ + G GN ++G ++V G + G SG YA
Sbjct: 118 QGGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDDVLAGGIGKNTIIGGSG--KAVIYAG 175
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
IY E I++ D +
Sbjct: 176 PQGDTIYVAEQGSIIHAG--GGADKIYG 201
Score = 44.0 bits (102), Expect = 0.078, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 4/124 (3%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + ++ G SGNDV+ + + G++ + G+ G D F A I
Sbjct: 33 ANRLKVSNLYGGSGNDVLKAGTQGSWLVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNG 92
Query: 323 NAIIVYDANEHKQDF---LSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
V + S V + D + ++ L+ G D
Sbjct: 93 GRDTVLIVGKKAVTLNMARSGVTLAQGGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDD 152
Query: 379 VFES 382
V
Sbjct: 153 VLAG 156
Score = 40.5 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 3/133 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SG + + N S++ G N + T +VG G++ +GN
Sbjct: 13 SGEATTTAYAQLTNRHRVLSANRLKVSNLYGGSGNDVLKAGTQGSWLVGRGGSNTYVGNR 72
Query: 285 ANNVFFESSGND--VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++VF S+ +D G+ G DT + + + + + +S
Sbjct: 73 GDDVFVISASDDPKNIKGNGGRDTVLI-VGKKAVTLNMARSGVTLAQGGDGDDVIISGGN 131
Query: 343 RLRFADQCIDSVN 355
F +
Sbjct: 132 NSVFIKGGRGNTT 144
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 21/179 (11%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKN--MTIAQHTVIESVVGSS 275
+ +Y G+D+L G L S+ G + I+ +++ G+
Sbjct: 38 VSNLYGGSGNDVLKAGTQGSW-----LVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNG 92
Query: 276 GNDVVI-----------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G D V+ S + G+DV G ++ F + +
Sbjct: 93 GRDTVLIVGKKAVTLNMARSGVTLAQGGDGDDVIISG-GNNSVFIKGGRGNTTLVGGDGD 151
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFES 382
++ + + +A D++ V Q SI+ + + G DV E+
Sbjct: 152 DVLAGGIGKNTIIGGSGKAVIYAGPQGDTIYVAEQGSIIHAGGGADKIYGGKGNDVIEA 210
>gi|299069584|emb|CBJ40856.1| putative hemagglutinin/hemolysin-related protein [Ralstonia
solanacearum CMR15]
Length = 3427
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 56/140 (40%), Gaps = 5/140 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L+++L+G + + S + + G N + + +++ G +GND++ G + N+V
Sbjct: 3221 LNVSLLGTTQPTAIIEGTSGNDTLTGTSGNDRLYGYAGADTLNGGAGNDLLRGGAGNDVL 3280
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
GND+ G +G DT A ++ + + D ++D D
Sbjct: 3281 NGGDGNDILIGGAGNDTLTGGAGGDIFLWEVNAAD----NTGGNGADTITDFTLASGPDD 3336
Query: 350 CIDSVNVKQRSILEYTASYE 369
++ YTA +
Sbjct: 3337 ATADRIDVSALLVGYTAEAD 3356
>gi|294787631|ref|ZP_06752875.1| hemolysin-type calcium binding protein [Simonsiella muelleri ATCC
29453]
gi|294483924|gb|EFG31607.1| hemolysin-type calcium binding protein [Simonsiella muelleri ATCC
29453]
Length = 354
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + + G GND + G N+ SG+DV G G D +
Sbjct: 168 GGIGDDILDGGRGNDKLFGGIGNDTLYGGKGNDKLSGESGDDVLYGGQGNDELIGGIGND 227
Query: 315 LYKIYRFENAIIVYDANEHKQDFL 338
Y +YD+ D L
Sbjct: 228 TYIFDLGHGKDQIYDS--FGNDTL 249
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 20/140 (14%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
AP +G+ +Y T+ +D L IGG+ + I + G
Sbjct: 138 APSNIIGSTLYGKPFAN------DTLVGGINNDKL----IGGIGDDI---------LDGG 178
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + +++ G GND + G S ++V + GND G G DT+ +
Sbjct: 179 RGNDKLFGGIGNDTLYGGKGNDKLSGESGDDVLYGGQGNDELIGGIGNDTYIFDLGHGKD 238
Query: 317 KIYR-FENAIIVYDANEHKQ 335
+IY F N + + KQ
Sbjct: 239 QIYDSFGNDTLEFGRGIDKQ 258
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 43/244 (17%)
Query: 132 LGLMHPGSYN---------GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY--C 180
L L H G+Y+ G EN + + +V Q +D ++ Y
Sbjct: 4 LSLPHTGNYDLIITATDSGGLSNSINWKVHVENTNRVPTVSGSLNTQSLEVDENWTYHLP 63
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
T +D + + +E+ +S YD+ + L+ +
Sbjct: 64 VTFSDAD-----------TNETESLKFHLEMANGESVPAWLQYDA---NTQTLSGTADLS 109
Query: 241 NYIDLNTES-----WSSIGGYEKNMTIAQHTVI------------ESVVGSSGNDVVIGN 283
++LN + S + N+ A + I +++VG ND +IG
Sbjct: 110 GSLNLNIVATDIHQASVMLPLTLNIADAAPSNIIGSTLYGKPFANDTLVGGINNDKLIGG 169
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+++ GND G G DT + + ++ + N+ + + +
Sbjct: 170 IGDDILDGGRGNDKLFGGIGNDTLYGGKGNDKLSGESGDDVLYGGQGNDELIGGIGN-DT 228
Query: 344 LRFA 347
F
Sbjct: 229 YIFD 232
>gi|296086490|emb|CBI32079.3| unnamed protein product [Vitis vinifera]
Length = 334
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 48/151 (31%), Gaps = 32/151 (21%)
Query: 58 ALGEWSKVVDLTFEETSIH--SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
A W+ V LTF E+ + +D++ + +D + DV I
Sbjct: 148 AFERWAAVTPLTFTESDSYYSADLRIAFYTGDHGDGEAFDGENW----VATGDVTTSSIS 203
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
L A+HEIGH LGL H +M
Sbjct: 204 SAIDLESVAVHEIGHLLGLGHSSVEEA-------------------IMY-------PTIT 237
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
S DI +Q++YG+ G++
Sbjct: 238 SRTKKVELASDDIQGIQELYGSNPNYNGSST 268
>gi|261366057|ref|ZP_05978940.1| iron-regulated protein FrpA [Neisseria mucosa ATCC 25996]
gi|288565335|gb|EFC86895.1| iron-regulated protein FrpA [Neisseria mucosa ATCC 25996]
Length = 378
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 5/206 (2%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
K ++ ++V+ + +++Y G D D+ G +Y+ + G E
Sbjct: 103 DKTVTAKDMAGMKVEGVGTDGNESLY---GWDTADVLDGGKGNDYLSGYNGDD-LLKGGE 158
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N ++ ++++ G++GND + G ++ GND G G D A
Sbjct: 159 GNDSLYGGEGVDTLEGNAGNDYLSGEKGADILKGGEGNDELHGGEGSDILNGGAGDDRLY 218
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
E V++ H +D +SD + K + + +I+ G
Sbjct: 219 GGSSEADTYVFE-KGHGKDVVSDSAYQAAHTDTLRFNGAKFAEAVFTRSGNNLVIKAYGG 277
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYL 403
+ +++ +++ D FD
Sbjct: 278 EDAVTVQGYFDSSSYRYYDFAFDDKT 303
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 38/116 (32%), Gaps = 12/116 (10%)
Query: 289 FFESSGNDVFDGSSGLDTFFYYAP-SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G+D+ +G +G D + + + Y + +V D+ + LRF
Sbjct: 1 MHGGEGSDILNGGAGDDRLYGGSSEADTYVFEKGHGKDVVSDSAYQAAHT----DTLRFN 56
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + +I+ G + +++ +++ D FD
Sbjct: 57 GAKFAE-------AVFTRSGNNLVIKAYGGEDAVTVQGYFDSSSYRYYDFAFDDKT 105
>gi|149640756|ref|XP_001508107.1| PREDICTED: similar to membrane-type matrix metalloproteinase 2
[Ornithorhynchus anatinus]
Length = 920
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 56/209 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS- 74
+ L + W++ + + T + E R A W + L F E
Sbjct: 503 YALTGRKWNHRQLTFSIQNYTEKLGWYQSYE-------AVRRAFRVWEQATPLVFREIPY 555
Query: 75 --------IHSDIKFISSNNGYVCTPRYDS-------RYFM------EINFDKADVWRYG 113
+DI + ++ + + +D YF + +FD + W +
Sbjct: 556 EDIRLRRQKEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGMGGDAHFDAEEPWTFA 615
Query: 114 IG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G L A+HE+GH+LGL H + + +M+ F
Sbjct: 616 NTDVYGNNLFLVAVHELGHSLGLEHSNNPSA-------------------IMAPFYQWMD 656
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D D+ +Q++YG P G
Sbjct: 657 TEDFQ------LPEDDLRGIQQLYGTPDG 679
>gi|295690168|ref|YP_003593861.1| peptidase M10A and M12b matrixin and adamalysin [Caulobacter segnis
ATCC 21756]
gi|295432071|gb|ADG11243.1| peptidase M10A and M12B matrixin and adamalysin [Caulobacter segnis
ATCC 21756]
Length = 556
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 85/446 (19%), Positives = 142/446 (31%), Gaps = 78/446 (17%)
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+ I+ G+ L HE+GHALG +NG + Y S+
Sbjct: 109 WYWIDPLDGSTKPPGMNS---LVEVLAHELGHALG------FNG----FSDWATYALGSY 155
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
T ++ + +YG N+ V +P
Sbjct: 156 GTRFDRLIQVENGLPYFVGEQAVA-----------LYGGAVPLTAGNV--FHVGNTSTPL 202
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ + D+ + + L ++I + ++GS D
Sbjct: 203 NTDLMNGLAFRT-DVRYLVSALDVAILRDMGTATILS-------------DKLLGSPKGD 248
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYD---ANEHK 334
V+ G + N+ +G+DV +G G DT Y S Y + + V D
Sbjct: 249 VIHGGAGNDEIQGFAGDDVIEGGLGADTAIYAGASENYAWSKDAKGSWTVRDLRTGAPEG 308
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYT---ASYEDLIQVIGQDVFESMKHFYEFGL 391
D L VE L+F+D+ + + +I DL+ + V + +
Sbjct: 309 IDTLHGVETLKFSDKTVSLASTSPLAIAAGALLRGGQSDLVADLDAKVADGSRTLASAVA 368
Query: 392 ----SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
S G+ + + YL G G A Y+ EG N + + Y A
Sbjct: 369 TLMTSAGQTTSVATLSYL-------FFTGKIPGDAGMDYLVS--PEGPNGNNLNSAYYQA 419
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ L N F + + G EGR Y L ++ R + + GAA
Sbjct: 420 FN--LENRFINFAVNLG---------GVGEGRAQFEAKYGALSLFEATREAYKAIFGAAP 468
Query: 508 RHYITHGVKEGRNPDAFKALEYIASH 533
TH + +GR Y AS+
Sbjct: 469 NDAKTHALIDGRE-------AYFASY 487
>gi|260460268|ref|ZP_05808520.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
gi|259033913|gb|EEW35172.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length = 2931
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 13/128 (10%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IA T +++ GS+G+D + G + + +G+D+ DG +G D A + Y +
Sbjct: 2056 IATGTTNDTITGSAGDDHIQGGAGIDTLNGGAGDDLLDGGTGADIMKGNAGNDTYVVDDA 2115
Query: 322 ENAIIVYDANEHKQD----------FLSDVERLRFADQCIDSVNVK-QRSILEYTASYED 370
+ +I +A D F +DVE L ++L +
Sbjct: 2116 GDQVI--EAASEGIDMVLSSVTYTIFYADVENLTLTGTAAIDGTGNVSSNVLTGNSGDNR 2173
Query: 371 LIQVIGQD 378
L G D
Sbjct: 2174 LTGNGGND 2181
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 19/150 (12%)
Query: 199 KGSLGNNIYKIEVQQKD-------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
KG+ GN+ Y ++ S TI+ + D+ +LTL G ID
Sbjct: 2102 KGNAGNDTYVVDDAGDQVIEAASEGIDMVLSSVTYTIFYA---DVENLTLTGTAA--IDG 2156
Query: 246 NTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
S++ G + + + ++ G +GND ++GN+ N+ GND +G+ G
Sbjct: 2157 TGNVSSNVLTGNSGDNRLTGNGGNDTFFGGAGNDFMLGNTGNDTMRGGGGNDHLEGAEGN 2216
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
D + + + F V ++
Sbjct: 2217 DNYVFQRGDGNDYVGDFRATKKVGSSDTAA 2246
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 245 LNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ S S+I G N ++ ++ ++ + G +GND + G + N+ F +GND G G
Sbjct: 2557 ISAGSGSNIIFGLSGNESLYGNSGVDVIYGGAGNDWMAGGAGNDTLFGQAGNDYLVGQDG 2616
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
D + Y + A+ A+ + L
Sbjct: 2617 DDRYVYRRGDQADSVDDATYAVTTATADINAAAAL 2651
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S +I + I + ES+ G+SG DV+ G + N+ +GND G +G D
Sbjct: 2551 PSSGGTISAGSGSNIIFGLSGNESLYGNSGVDVIYGGAGNDWMAGGAGNDTLFGQAGNDY 2610
Query: 307 FFYYAPSYLYKIYRFENAIIVYD 329
Y R + A V D
Sbjct: 2611 LVGQDGDDRYVYRRGDQADSVDD 2633
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N +A T GS+ D+V G + N +SGND+ G +G DT + Y+
Sbjct: 2744 NFVVAASTGA-IANGSAEADIVFGLTGNETLNGNSGNDILSGGAGNDTLVGGTGNDQYRF 2802
Query: 319 YRFENAIIVYDANE 332
+ A + ++ +
Sbjct: 2803 RAGDGADTIIESGD 2816
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + I E++ G++G D++ + N+V +G+D G +G D
Sbjct: 2355 TANAGTGSNIIFGLAGNETLWGNTGTDIIYAGAGNDVLSAGTGDDTLVGGTGNDYENGEG 2414
Query: 312 PSYLYKIYRFENAIIVYD 329
S Y R + A V D
Sbjct: 2415 GSDRYVYRRGDGADTVED 2432
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 7/131 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------- 252
G G++ + GDDL G + + L E+++
Sbjct: 2278 GDAGSDTLTLSGGIVAEDLSFAWTGRDGDDLTITIAGGSSGDSVTLGQEAFAGARIDKLA 2337
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G I V + +G++++ G + N + ++G D+ +G D
Sbjct: 2338 LDGMSATNFIVVGAVGGTANAGTGSNIIFGLAGNETLWGNTGTDIIYAGAGNDVLSAGTG 2397
Query: 313 SYLYKIYRFEN 323
+
Sbjct: 2398 DDTLVGGTGND 2408
>gi|239820612|ref|YP_002947797.1| outer membrane adhesin like proteiin [Variovorax paradoxus S110]
gi|239805465|gb|ACS22531.1| outer membrane adhesin like proteiin [Variovorax paradoxus S110]
Length = 2567
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 5/203 (2%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDLNTE 248
Q I G L + + + T+ +GG DLLD + + +
Sbjct: 2318 QNIEGVIGTGLADTLTGSASNDIIRGGAGNDTLDGAGGTGDLLDFSDGTAGLTFTLTQSS 2377
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S +S + + E V+G++ D + G+++N+ GNDV +G +G D
Sbjct: 2378 STTSFNASAAGLGTDGYKNFEGVIGTAFGDTITGSASNDQLRGGGGNDVINGLAGDDRIV 2437
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYTAS 367
A + + +N V+D+ + D ++D + A + ++ + L +
Sbjct: 2438 GGAGADILT-GGADNDTFVFDSAPNAVDSVTDFDASGSAASGDLIELSRGTFTALTTASG 2496
Query: 368 YEDLIQVIGQDVFESMKHFYEFG 390
G
Sbjct: 2497 NTLSAAEFASLNGGGAGDTVGAG 2519
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 46/140 (32%), Gaps = 7/140 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I G N + +++ +G+D V G + N+ +GND DG SG D
Sbjct: 2 TTITGSNGNDLLTGTAGSDTINSGNGDDSVSGGAGNDSLNGGAGNDTLDGGSGSDQLNGG 61
Query: 311 APSYLYKIYRFENAIIVYD---ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + ENA D L +L+F + + + T
Sbjct: 62 SGADTLIYNVSENAAAGTSDVYTGGAGVDTL----QLQFTRTQWLEASTQTQIAAYLTHL 117
Query: 368 YEDLIQVIGQDVFESMKHFY 387
G+ S F
Sbjct: 118 AAVTNARTGEVSNGSASDFV 137
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 14/111 (12%)
Query: 233 LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+T I G L + S I + +++ +S+ G +GND
Sbjct: 1 MTTITGSNGNDLLTGTAGSDTINSGNGDDSVSGGAGNDSLNGGAGNDT---------LDG 51
Query: 292 SSGNDVFDGSSGLDTFFY----YAPSYLYKIYRFENAIIVYDANEHKQDFL 338
SG+D +G SG DT Y A + +Y + + +L
Sbjct: 52 GSGSDQLNGGSGADTLIYNVSENAAAGTSDVYTGGAGVDTLQLQFTRTQWL 102
>gi|188528637|ref|NP_032634.3| matrix metalloproteinase-14 [Mus musculus]
gi|26353494|dbj|BAC40377.1| unnamed protein product [Mus musculus]
gi|74208110|dbj|BAE29158.1| unnamed protein product [Mus musculus]
gi|74211726|dbj|BAE29216.1| unnamed protein product [Mus musculus]
gi|74216086|dbj|BAE23719.1| unnamed protein product [Mus musculus]
gi|74228075|dbj|BAE38000.1| unnamed protein product [Mus musculus]
gi|78499513|gb|ABB45784.1| type 1 matrix metalloprotease 14 [Mus musculus]
gi|148704401|gb|EDL36348.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a [Mus
musculus]
Length = 582
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|74196330|dbj|BAE33060.1| unnamed protein product [Mus musculus]
Length = 582
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|71902282|ref|ZP_00684277.1| Hemolysin-type calcium-binding region [Xylella fastidiosa Ann-1]
gi|71727968|gb|EAO30188.1| Hemolysin-type calcium-binding region [Xylella fastidiosa Ann-1]
Length = 672
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 255 GYEKNMTIAQHT---VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N I T + ++G GND + G +++ +GNDV G +G DT+ +
Sbjct: 496 GTSGNDLIRGGTNGEGNDVLIGKGGNDELSGGLGDDILDGGTGNDVLSGGTGNDTYRFAI 555
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + +I ++ D Q +
Sbjct: 556 GAGVDRIEDYDTTTGNADVLSIGQGVSIN 584
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 269 ESVVGSSGNDVV------------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ +VG+SGND++ IG N+ G+D+ DG +G D + Y
Sbjct: 492 DLLVGTSGNDLIRGGTNGEGNDVLIGKGGNDELSGGLGDDILDGGTGNDVLSGGTGNDTY 551
Query: 317 K--IYRFENAIIVYDANEHKQDFLS 339
+ I + I YD D LS
Sbjct: 552 RFAIGAGVDRIEDYDTTTGNADVLS 576
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
Query: 273 GSSGNDVVIGNSANNVFFESS---GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G+ G+D+++G S N++ + GNDV G G D + N ++
Sbjct: 487 GTLGSDLLVGTSGNDLIRGGTNGEGNDVLIGKGGNDELSGGLGDDILD-GGTGNDVLSGG 545
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
F R D + N SI + + + Q +G D+ S+
Sbjct: 546 TGNDTYRFAIGAGVDRIEDYDTTTGNADVLSIGQGVSINQLWFQHVGNDLEVSI 599
>gi|294139717|ref|YP_003555695.1| RTX toxin [Shewanella violacea DSS12]
gi|293326186|dbj|BAJ00917.1| RTX toxin, putative [Shewanella violacea DSS12]
Length = 2267
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 16/140 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+Y G+D L + + G + G + +
Sbjct: 2060 DANDSLTGYTGTDTMYGGAGNDTL--SSVDGDD-----------KLYGEAGDDKLTAGNG 2106
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + G GND + G +++ +GND + G D + + + S I ++++
Sbjct: 2107 VDQLFGGEGNDTLDGGYGDDLLSGGAGNDTLNAGGGSDIYQFGSGSGQDIINNYDSSSSS 2166
Query: 328 YDANEHKQDFLSDVERLRFA 347
D +E L F+
Sbjct: 2167 IDVARFDD---VSIEDLWFS 2183
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+Y G+D L + + G + G + +
Sbjct: 968 DANDSLTGYTGTDTMYGGAGNDTL--SSVDGDD-----------KLYGEAGDDKLTAGNG 1014
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + G GND + G +++ +GNDV G G D F + + ++ +
Sbjct: 1015 VDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTT- 1073
Query: 328 YDANEHKQDFLSDVERLRFADQCID 352
+D L + AD +
Sbjct: 1074 ------NKDTLVFGANISIADVTLV 1092
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+Y G+D L + + G + G + +
Sbjct: 1150 DANDSLTGYTGTDTMYGGAGNDTL--SSVDGDD-----------KLYGEAGDDKLTAGNG 1196
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + G GND + G +++ +GNDV G G D F + + ++ +
Sbjct: 1197 VDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTT- 1255
Query: 328 YDANEHKQDFLSDVERLRFADQCID 352
+D L + AD +
Sbjct: 1256 ------NKDTLVFGANISIADVTLV 1274
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+Y G+D L + + G + G + +
Sbjct: 1332 DANDSLTGYTGTDTMYGGAGNDTL--SSVDGDD-----------KLYGEAGDDKLTAGNG 1378
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + G GND + G +++ +GNDV G G D F + + ++ +
Sbjct: 1379 VDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTT- 1437
Query: 328 YDANEHKQDFLSDVERLRFADQCID 352
+D L + AD +
Sbjct: 1438 ------NKDTLVFGANISIADVTLV 1456
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+Y G+D L + + G + G + +
Sbjct: 1514 DANDSLTGYTGTDTMYGGAGNDTL--SSVDGDD-----------KLYGEAGDDKLTAGNG 1560
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + G GND + G +++ +GNDV G G D F + + ++ +
Sbjct: 1561 VDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTT- 1619
Query: 328 YDANEHKQDFLSDVERLRFADQCID 352
+D L + AD +
Sbjct: 1620 ------NKDTLVFGANISIADVTLV 1638
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 16/138 (11%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A GS G++ + F I + G+D + +YID G
Sbjct: 778 AATGSDGDDTIRARSGSNSGVF---ILANNGNDRV---FGANGDDYID----------GG 821
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + +VG GND++ G + ++V +GNDV G G D F +
Sbjct: 822 SGDDYLYGSNGHDQLVGGEGNDILDGGNGDDVLSGGAGNDVLTGGYGNDRFLFGYGDGQD 881
Query: 317 KIYRFENAIIVYDANEHK 334
+ ++ + D
Sbjct: 882 TLSDYDTSTTNKDTLAFG 899
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+Y G+D L + + G + G + +
Sbjct: 1696 DANDSLTGYTGTDTMYGGAGNDTL--SSVDGDD-----------KLYGEAGDDKLTAGNG 1742
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + G GND + G +++ +GNDV G G D F + + ++ +
Sbjct: 1743 VDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSAT- 1801
Query: 328 YDANEHKQDFLSDVERLRFADQCID 352
+D L + AD +
Sbjct: 1802 ------NKDTLVFGANISIADVTLV 1820
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+Y G+D L + + G + G + +
Sbjct: 1878 DANDSLTGYTGTDTMYGGAGNDTL--SSVDGDD-----------KLYGEAGDDKLTAGNG 1924
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ + G GND + G +++ +GNDV G G D F + + ++ +
Sbjct: 1925 VDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSAT- 1983
Query: 328 YDANEHKQDFLSDVERLRFADQCID 352
+D L + AD +
Sbjct: 1984 ------NKDTLVFGANISIADVTLV 2002
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 41/110 (37%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N ++ +T +++ G +GND + ++ + +G+D +G+D F +
Sbjct: 1693 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGN 1752
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
++ + N+ + L D+++ S
Sbjct: 1753 DTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSATN 1802
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 41/110 (37%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N ++ +T +++ G +GND + ++ + +G+D +G+D F +
Sbjct: 1875 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGN 1934
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
++ + N+ + L D+++ S
Sbjct: 1935 DTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSATN 1984
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 40/103 (38%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N ++ +T +++ G +GND + ++ + +G+D +G+D F +
Sbjct: 965 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGN 1024
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
++ + N+ + L D+++
Sbjct: 1025 DTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSD 1067
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 40/103 (38%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N ++ +T +++ G +GND + ++ + +G+D +G+D F +
Sbjct: 1147 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGN 1206
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
++ + N+ + L D+++
Sbjct: 1207 DTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSD 1249
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 40/103 (38%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N ++ +T +++ G +GND + ++ + +G+D +G+D F +
Sbjct: 1329 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGN 1388
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
++ + N+ + L D+++
Sbjct: 1389 DTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSD 1431
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 40/103 (38%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N ++ +T +++ G +GND + ++ + +G+D +G+D F +
Sbjct: 1511 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGN 1570
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
++ + N+ + L D+++
Sbjct: 1571 DTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSD 1613
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N ++ +T +++ G +GND + ++ + +G+D +G+D F +
Sbjct: 2057 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGN 2116
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + ++ A + + +F +
Sbjct: 2117 DTLD-GGYGDDLLSGGAGNDTLNAGGGSDIYQFGSGSGQDI 2156
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 34/86 (39%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++ ++GND V G + ++ SG+D GS+G D + + ++ +
Sbjct: 800 ILANNGNDRVFGANGDDYIDGGSGDDYLYGSNGHDQLVGGEGNDILDGGNGDDVLSGGAG 859
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNV 356
N+ + L D+++
Sbjct: 860 NDVLTGGYGNDRFLFGYGDGQDTLSD 885
Score = 37.0 bits (84), Expect = 9.2, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 10/141 (7%)
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ ND G +G DT + A + ++ + +A + K + V++L +
Sbjct: 1693 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLY-GEAGDDKLTAGNGVDQLFGGEG 1751
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+L A + L G D F FG +G+D D +
Sbjct: 1752 NDTLDGGYGDDLLSGGAGNDVLTGGYGNDRF-------LFGYGDGQDTLSDYDTS-ATNK 1803
Query: 410 DLRNVFGSDRGAAARHYITHG 430
D VFG++ A + G
Sbjct: 1804 D-TLVFGANISIADVTLVKSG 1823
Score = 37.0 bits (84), Expect = 9.2, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 10/141 (7%)
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ ND G +G DT + A + ++ + +A + K + V++L +
Sbjct: 1875 KGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLY-GEAGDDKLTAGNGVDQLFGGEG 1933
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+L A + L G D F FG +G+D D +
Sbjct: 1934 NDTLDGGYGDDLLSGGAGNDVLTGGYGNDRF-------LFGYGDGQDTLSDYDTS-ATNK 1985
Query: 410 DLRNVFGSDRGAAARHYITHG 430
D VFG++ A + G
Sbjct: 1986 D-TLVFGANISIADVTLVKSG 2005
>gi|156408786|ref|XP_001642037.1| predicted protein [Nematostella vectensis]
gi|156229178|gb|EDO49974.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 64/187 (34%), Gaps = 46/187 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK-- 80
W N + Y + T D+T+ + V A WS V F T+ +
Sbjct: 67 WLNTSLLYAFETYTA-----DLTQ--TVQKAVIAKAFKMWSDVSPFIFTLTTDKTKAHIK 119
Query: 81 --FISSNNG----YVCTPR--YDSRYFME---INFDKADVWRYGIGKGTILSHNALHEIG 129
F ++ +G P Y+ ++FD + + G+ GT L A+HEIG
Sbjct: 120 ILFGTNTHGNCLKAFDGPGKVIAHAYYPSDGRLHFDDDETFTDGVNTGTNLLAIAVHEIG 179
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H LG+ H N SVM Y ++ DI
Sbjct: 180 HILGIAHSTDKN-------------------SVM-Y------PKYETYKPNLQLHAEDIN 213
Query: 190 AVQKIYG 196
A+ IYG
Sbjct: 214 AIAYIYG 220
>gi|113475542|ref|YP_721603.1| cell surface protein [Trichodesmium erythraeum IMS101]
gi|110166590|gb|ABG51130.1| cell surface protein [Trichodesmium erythraeum IMS101]
Length = 603
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
+FD LYL + N + + H++ G EGR+P AF Y+A++ + +A
Sbjct: 517 SFDENLYLIENPGVANAVANGFFDSGFEHWLEFGFLEGRSPQLAFDEQFYLATYPGVASA 576
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFV 481
A+ + G +H+ FG EGR
Sbjct: 577 VANG--VFINGLEHYVKFGEAEGRLP 600
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDL 579
++F Y+ + + NA A+ +G +H+ FG+ EGRS F+ YL +Y +
Sbjct: 516 ESFDENLYLIENPGVANAVANG--FFDSGFEHWLEFGFLEGRSPQLAFDEQFYLATYPGV 573
Query: 580 WNVFGSDR-SAAAQHYITHGMKEGR 603
+ + +HY+ G EGR
Sbjct: 574 ASAVANGVFINGLEHYVKFGEAEGR 598
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLR 496
+F Y+ + + NA A+ G +H+ FG EGR FD YL +Y +
Sbjct: 517 SFDENLYLIENPGVANAVANG--FFDSGFEHWLEFGFLEGRSPQLAFDEQFYLATYPGVA 574
Query: 497 NVFGSDRG-AAARHYITHGVKEGRNP 521
+ + HY+ G EGR P
Sbjct: 575 SAVANGVFINGLEHYVKFGEAEGRLP 600
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 539
+FD LYL + N + + H++ G EGR+P AF Y+A++ + +A
Sbjct: 517 SFDENLYLIENPGVANAVANGFFDSGFEHWLEFGFLEGRSPQLAFDEQFYLATYPGVASA 576
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
A+ + G +H+ FG EGR
Sbjct: 577 VANG--VFINGLEHYVKFGEAEGR 598
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 364 YTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRG 420
Y + + F+ +H+ EFG EGR FD YL +Y + + +
Sbjct: 523 YLIENPGVANAVANGFFDSGFEHWLEFGFLEGRSPQLAFDEQFYLATYPGVASAVANGVF 582
Query: 421 -AAARHYITHGVKEGRNP 437
HY+ G EGR P
Sbjct: 583 INGLEHYVKFGEAEGRLP 600
>gi|121728438|ref|ZP_01681465.1| hypothetical protein VCV52_1596 [Vibrio cholerae V52]
gi|121629311|gb|EAX61745.1| hypothetical protein VCV52_1596 [Vibrio cholerae V52]
Length = 1608
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 1305 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 1359
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 1360 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 1419
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 1420 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 1479
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 1480 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 1532
>gi|291301772|ref|YP_003513050.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290570992|gb|ADD43957.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 620
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 66/222 (29%), Gaps = 31/222 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMT 261
K+ + ++ +GG D + ++ G Y + SS + G + N
Sbjct: 265 KVNLTLLGGDGNDRVHSAGGADTI-VSGHGKDDVYAGEGNDYVSSGSGIDYVDGQDGNDD 323
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK---- 317
I T +++ G G+D + G + + GND DG +G D +
Sbjct: 324 IGGGTGNDTLYGLGGDDYINGGEDADYLEGAKGNDTIDGGTGPDIISGGKGDDTLRGGGT 383
Query: 318 -----------------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y E V + ++ D + D+ +
Sbjct: 384 GTDYDGYDPSKPERGDVFYGGEGKDDVTAGSGKSDAYIQDGDSTHNVDKTVTVEISDAGG 443
Query: 361 ILEYTAS---YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+++ S E + + GL RD F
Sbjct: 444 FIKFEGSDEFKERMQADLDMMRSSPTAQQMLEGLESKRDPNF 485
Score = 44.3 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 30/115 (26%), Gaps = 4/115 (3%)
Query: 271 VVGSSGNDVVIG--NSANN-VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
V G GNDV+ N+ N GND + G DT N +
Sbjct: 249 VRGGEGNDVITVDKNTKVNLTLLGGDGNDRVHSAGGADTIVSGHGKDDVYAGE-GNDYVS 307
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D + + + + + L G D +
Sbjct: 308 SGSGIDYVDGQDGNDDIGGGTGNDTLYGLGGDDYINGGEDADYLEGAKGNDTIDG 362
>gi|115528828|gb|AAI11523.1| Mmp21 protein [Mus musculus]
Length = 462
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 78/211 (36%), Gaps = 48/211 (22%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDI------TELN-PNAQEVARWALGEWSKVVDLTFEE 72
D + + L++ + ++L+ + + R A WS+V L F E
Sbjct: 49 DGQQEDASDTGASRAFSKKTLTWRLVGDAYSSQLSGDEQRYIFRLAFRMWSEVTPLDFRE 108
Query: 73 --TSIHS--DIKFISSNNGYVCTPRYDSRY---------FMEINFDKADVWRY-GIGKGT 118
T+ + DIK ++ PR EI+FD + + G
Sbjct: 109 DRTAPGTMVDIKLGFGRGRHLGCPRVFDGSGQEFAHAWRLGEIHFDDDEHFTPLSSDTGI 168
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HEIGH LGL P +Y G S+M P + +F
Sbjct: 169 SLLKVAVHEIGHVLGL--PHTYRVG-----------------SIM---QPNYIPQEPAFE 206
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+D A+Q++YG+ KGS + ++
Sbjct: 207 ----LDWADRKAIQRLYGSCKGSF-DTVFDW 232
>gi|144899998|emb|CAM76862.1| hypothetical protein MGR_1109 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 703
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 65/195 (33%), Gaps = 9/195 (4%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G + Y D+ S S + S + +++ G+ +L + +
Sbjct: 395 GANALYLVDAGNHSA-SLNNVNNMYFLGSGTHFTAEAPLTNISISGSAGSDSVTLDDGV- 452
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV---KNYIDLNTESWSSIGGYEKNMTIAQ 264
++++ G D++ L G + S +
Sbjct: 453 ----NAITINAVESVTGGTGLDIVTLAAGGQTVEVSGVESVIGGSGTDSITLAAGGQTIG 508
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +E+V G +GND++ G+SA G+D G G DT + +YK +
Sbjct: 509 VSGVETVTGGTGNDIITGSSAAESLVGGLGDDTLIGGGGADTLTGGDGADIYKYAATTDF 568
Query: 325 IIVYDANEHKQDFLS 339
+ + H D +
Sbjct: 569 GDIITSFSHNDDTIV 583
>gi|157167961|ref|XP_001662924.1| matrix metalloproteinase [Aedes aegypti]
gi|108881541|gb|EAT45766.1| matrix metalloproteinase [Aedes aegypti]
Length = 470
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 53/199 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-S 74
+++ + W I Y ++ + + + A EW+K +L F
Sbjct: 73 YVIGSESWRKRKITYFIANWSSKVGEDSVAKF-------MQRAFNEWAKYSNLKFVRVYD 125
Query: 75 IHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG---IGK 116
+DI + + P Y +I+FD+ + W+ +
Sbjct: 126 PSADIIVGFGSGHHGDNYPFDGPGNILAHAFYPYEMQSYGGDIHFDEDENWKENSTHLSD 185
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
G A+HE+GH+LGL H Y +S+M
Sbjct: 186 GVDFYSVAIHELGHSLGLAHSPVY-------------------SSLM--------FPYYK 218
Query: 177 FGYCATPMVSDIVAVQKIY 195
T DI+AV K+Y
Sbjct: 219 GITQGTLDYDDILAVYKLY 237
>gi|77404853|ref|YP_345425.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77390503|gb|ABA81684.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 1544
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ GD + + + G N +L G E I + + + G +G+D V G+
Sbjct: 1397 DAFGDVYISIENLMGSNNNDNLR--------GNEGANAIYGASGNDVIYGRAGDDTVTGD 1448
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
N+ + +GND G SG D F + A +I FE+ + +
Sbjct: 1449 DGNDTLYGQAGNDQLYGGSGSDVFVFGAGYARDRIADFEDDVDI 1492
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 9/173 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESV 271
T+ G D L +Y + + + KN A V IE++
Sbjct: 1174 GDAGNDTLSGGSGADTLSGGTGIDTASYATSASGLCADLSNSAKNTGDAADDVYAGIENL 1233
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYD 329
+GS +D ++G+ N SG+D +G +G DT + Y + + +
Sbjct: 1234 IGSDFSDELVGSGIGNRLTGGSGHDWLEGRAGADTLDGGSGWDRADYSLSTAGVSADLLT 1293
Query: 330 ANEH----KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D +E L ++ + L + + L G D
Sbjct: 1294 PTSNTGDAAGDTYISIESLGGSNFGDTLAGDNNANTLLGRSGNDVLRGREGDD 1346
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 57/153 (37%), Gaps = 7/153 (4%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIA----QHTVIESVVGSSGNDVVIGNSANNVF 289
T YI + + S+ G A + + + G G+D ++G+ N++
Sbjct: 1298 TGDAAGDTYISIESLGGSNFGDTLAGDNNANTLLGRSGNDVLRGREGDDHLLGHEDNDIL 1357
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D DG G+D Y + + K+ + +I DA D +E L ++
Sbjct: 1358 DGGAGSDTLDGGEGIDRVSYGSATTAVKVDLSDPSINTGDAFG---DVYISIENLMGSNN 1414
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + + + + + G D
Sbjct: 1415 NDNLRGNEGANAIYGASGNDVIYGRAGDDTVTG 1447
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 12/169 (7%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D + + GG Y + + ++ S G + ++ T +S+VG +G D+
Sbjct: 883 DTVDGGNGNDNISGSS-GGDLLYGNADKDTIS---GGSGSDSLVGGTGADSLVGGTGADL 938
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI--------IVYDAN 331
++G + + G+D DG + D + S L +++I I
Sbjct: 939 LLGEAGMDTLVGGDGSDSLDGGADSDVIYGSGGSDLASGGDGDDSIYGGIGSDRIFGGGG 998
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + L D ++L + LI D
Sbjct: 999 DDLLEGDEGSDTLYGNDGNDTLFGAAGFNMLSGGDGNDSLIGGDDDDQL 1047
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 11/127 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + +I ++V G +GND + G+S ++ + ++ D G SG D+
Sbjct: 866 TLTGMMSSDSIIGGEGRDTVDGGNGNDNISGSSGGDLLYGNADKDTISGGSGSDSLVGGT 925
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ E D L + DS++ S + Y + DL
Sbjct: 926 GADSLV----GGTGADLLLGEAGMDTLVGGD-------GSDSLDGGADSDVIYGSGGSDL 974
Query: 372 IQVIGQD 378
D
Sbjct: 975 ASGGDGD 981
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQ---TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G++ + T++ + G+D +L G + + L E S+ G
Sbjct: 615 SGGSGDDTLSGDAGNDTVRGGYGDDTVFGAKGND----SLQGQAGDDLLLGGEGADSLEG 670
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + + + GSSG+D + G+ + G+D +G+ G D Y+
Sbjct: 671 GDGDDIGSGGAGNDVMTGSSGDDHLSGDDGADTLDGGMGDDSLEGNEGNDRLLYWRGDDT 730
Query: 316 YKIYRFENAIIVYDANEHKQ 335
+ ++ + E+
Sbjct: 731 LIGGLGNDTFVLSTSAEYGS 750
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 1/120 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G E T+ +++ GSSG D++ GN+ + SG+D G +G D+
Sbjct: 875 SIIGGEGRDTVDGGNGNDNISGSSGGDLLYGNADKDTISGGSGSDSLVGGTGADSLVGGT 934
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ L + +V D +D + + + + + + +
Sbjct: 935 GADLL-LGEAGMDTLVGGDGSDSLDGGADSDVIYGSGGSDLASGGDGDDSIYGGIGSDRI 993
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 19/162 (11%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G+D + +DLN S+ G + T++ ++V G G+D
Sbjct: 588 GDGNDSI-------SGAQLDLNLYLQGGAGDDSVSGGSGDDTLSGDAGNDTVRGGYGDDT 640
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
V G N+ +G+D+ G G D+ + + + D LS
Sbjct: 641 VFGAKGNDSLQGQAGDDLLLGGEGADSLEGGDGDDIGSGGAGNDVMT----GSSGDDHLS 696
Query: 340 DVERLRFADQCI---DSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D + + L Y + LI +G D
Sbjct: 697 GDDGADTLDGGMGDDSLEGNEGNDRLLYWRGDDTLIGGLGND 738
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G++ N+ SG D G +G+DT Y + +A DA D
Sbjct: 1170 DRLWGDAGNDTLSGGSGADTLSGGTGIDTASYATSASGLCADLSNSAKNTGDA---ADDV 1226
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ +E L +D + V + L + ++ L G D +
Sbjct: 1227 YAGIENLIGSDFSDELVGSGIGNRLTGGSGHDWLEGRAGADTLDG 1271
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 63/227 (27%), Gaps = 27/227 (11%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
SY + T +Q G Y I + D +
Sbjct: 422 SYVRNGVTTQGGVGDVAITFNPIGWKRLQTTEG----------YDIRFENGD-KLRYAVV 470
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
SG ++L + D + G + + IA G G D + G
Sbjct: 471 ASGAPASVNLASLVLDGAVGDARANAL-DASGQTRQVQIA---------GGEGGDTLRGG 520
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDF-LS 339
+ +++ G DV G+ G DT F A I + IV + + D
Sbjct: 521 ANHDMLSGDGGADVIYGNDGNDTLFIDAADLASGIVNGGRGHDTAIVLGSEDVVLDLQAH 580
Query: 340 DVERLRFADQ--CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+E D I + L+ A + + G D
Sbjct: 581 SLEAAAGGDGNDSISGAQLDLNLYLQGGAGDDSVSGGSGDDTLSGDA 627
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ T+ G D LD GG + + + G + + +I + + G G
Sbjct: 943 AGMDTLVGGDGSDSLD----GGADSDVIYGSGGSDLASGGDGDDSIYGGIGSDRIFGGGG 998
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D++ G+ ++ + + GND G++G + + ++ ++ + D
Sbjct: 999 DDLLEGDEGSDTLYGNDGNDTLFGAAGFNMLSGGDGNDSLIGGDDDDQLV----GGNGAD 1054
Query: 337 FLSDVE 342
L +
Sbjct: 1055 TLIGGQ 1060
>gi|54296668|ref|YP_123037.1| structural toxin protein RtxA [Legionella pneumophila str. Paris]
gi|53750453|emb|CAH11847.1| structural toxin protein RtxA [Legionella pneumophila str. Paris]
Length = 7679
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 4/143 (2%)
Query: 246 NTESWSSIGGYEKN-MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
SS I+ + + G GNDV+ S ++V SG+DV G +G
Sbjct: 6957 RETVLSSGSKRSGGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIDAGSGDDVIVGGTGN 7016
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + + +R + A DF +++++ I V+V
Sbjct: 7017 DTLTGGSGADQFVFFRGHGSNNAGTAPTDIITDFEVNIDKIVINANNIIGVSVSNPVSNP 7076
Query: 364 YTASYEDLIQVIGQDVFESMKHF 386
+ + S++HF
Sbjct: 7077 DLSK--TYTITVNYSDAPSIEHF 7097
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GNDV+ G + N+ GND G G+DTFF+ + + D
Sbjct: 7530 LNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 7583
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ D SD L +D + +++ S+ Y
Sbjct: 7584 KANPVDQSSDASVLNLSD-LLSDADLETNSLDNYL 7617
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ N + + + G++GND + G N+ G D F SG D
Sbjct: 7520 SLTMLANNPELNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDD------ 7573
Query: 312 PSYLYKIYRFENAIIVYDANEHK---QDFLSDVE 342
+ I F+ + ++ D LSD +
Sbjct: 7574 DGGVDTITDFKANPVDQSSDASVLNLSDLLSDAD 7607
>gi|34810827|pdb|1OS2|A Chain A, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810828|pdb|1OS2|B Chain B, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810829|pdb|1OS2|C Chain C, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810830|pdb|1OS2|D Chain D, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810831|pdb|1OS2|E Chain E, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810832|pdb|1OS2|F Chain F, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810833|pdb|1OS9|A Chain A, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810834|pdb|1OS9|B Chain B, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810835|pdb|1OS9|C Chain C, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810836|pdb|1OS9|D Chain D, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810837|pdb|1OS9|E Chain E, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810838|pdb|1OS9|F Chain F, Binary Enzyme-Product Complexes Of Human Mmp12
Length = 165
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 6 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 58
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 59 VFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 117
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 118 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 151
Query: 188 IVAVQKIYGAPKGS 201
I +Q +YG PK +
Sbjct: 152 IRGIQSLYGDPKEN 165
>gi|163797281|ref|ZP_02191234.1| hypothetical protein BAL199_10045 [alpha proteobacterium BAL199]
gi|159177372|gb|EDP61928.1| hypothetical protein BAL199_10045 [alpha proteobacterium BAL199]
Length = 371
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI G+D + G N L + + G N T+ + + + G GN
Sbjct: 219 GNDTIIGGDGNDTM----FAGQDNDSLLGGDGRDILYGNLGNDTLYGGSAPDMLYGGQGN 274
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
DV+ G + + GND+ G +G D F+ +P I F+
Sbjct: 275 DVLSGGQGVDTLAGNRGNDLMIGGTGGDIFWMGSPDGADTISDFD 319
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/291 (15%), Positives = 83/291 (28%), Gaps = 17/291 (5%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH-ALGLMHPGSYNGGYPVYGVDN 151
+ D D I GT+LS + IG+ + + ++ P +
Sbjct: 5 TTSVTGLSGVATDGTDTGTLNITSGTLLSTSLTSIIGYSTINVSANAAHVISLPSTILAT 64
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+ + S S + + + + + A I G +L + +
Sbjct: 65 TSGTVTMVIS--STIGVSFTGANLTGTLLKVNLTASEGADSIIGGPDDDTLVGGVGNDSI 122
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+I G D + S+ G + I + + +
Sbjct: 123 TGGTGNGEDSIVAGDGKDTVRGGDGAD-------------SLFGGDGADLIYGNVGSDLL 169
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G SG D + G + ++ F GND G+ G D+ A + N I+
Sbjct: 170 SGGSGTDTMFGGADSDTIFGGEGNDRMWGNLGADSLLGEAGDDVIY-GNLGNDTIIGGDG 228
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + L D L ++ + L G DV
Sbjct: 229 NDTMFAGQDNDSLLGGDGRDILYGNLGNDTLYGGSAPDMLYGGQGNDVLSG 279
>gi|224070919|ref|XP_002187592.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 572
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 17/102 (16%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH-SDIKFISS----NNGYVCTPRYDSRYF------- 99
+ + +AL WS + L F E + + +DI+ S N+GY +
Sbjct: 129 RALMYYALKVWSDITPLNFHEVAGNNADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDH 188
Query: 100 ---MEINFDKADVWRY--GIGKGTILSHNALHEIGHALGLMH 136
+ +FD + W + G L A+HE GHA+GL H
Sbjct: 189 HTAGDTHFDDDEYWTFRSSDTNGMDLFAVAVHEFGHAIGLTH 230
>gi|254510354|ref|ZP_05122421.1| vcbs repeat domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534065|gb|EEE37053.1| vcbs repeat domain protein [Rhodobacteraceae bacterium KLH11]
Length = 2270
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 11/137 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-------DLNTESWSS--IGGYEKN 259
+ F T D D D L GG + I DL + + + G + N
Sbjct: 461 FGDAAPGTEFFATFDDPTVSD--DDNLFGGTGDDIVYGGRGDDLIEGNEDNDLLFGEDGN 518
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ I+ + G +G+D + G + +GND +G +G D F + I
Sbjct: 519 DTLRGGHGIDRLEGGAGSDELSGGDGADELTGGTGNDTLNGGAGEDIFAFKTGDGQDVIS 578
Query: 320 RFENAIIVYDANEHKQD 336
F+ A N D
Sbjct: 579 DFDPANDTIHINGDVLD 595
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 29/181 (16%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L+ E W+ + T+ + + + G +GND + G N++ + S G+D+ DG G
Sbjct: 626 NLSIEEWAGFLPNAGDDTLTGTSERDKIYGGAGNDTIQGLGGNDLIYGSFGDDLIDGGEG 685
Query: 304 LDTFFYYAPSY--------------------LYKIYRFENAIIVYDANE----HKQDFLS 339
D + A + + ++ I + + + +
Sbjct: 686 HDDLYGGAGNDRILGNSGGDYFDGGDGIDTIDFSLFSTNFNIDLSQSKAVHEGGFTEQVR 745
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ E + + ++L+ A + G D E G F
Sbjct: 746 NFENIIGGSGNNNLTGNVGANVLQGLAGNDTFTTGAGNDTIR-----VEGGAGADTVTDF 800
Query: 400 D 400
D
Sbjct: 801 D 801
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 18/136 (13%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK----IYRFENA 324
E+V+GS+ +D ++G+ +N G D DG G D + + + +
Sbjct: 23 ENVIGSNFDDNIVGDDQDNTIEGGEGIDQIDGLGGADILRGMEGDDVIDGGAPVGQGSDE 82
Query: 325 IIVYDANEHKQDFLS----------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
D +S + + D N ++ Y S D++
Sbjct: 83 EADRIEGGSGNDTISIHAGEAYGQAGNDSISTLDTGATGSNGDSPTVQAYGGSGNDMLDA 142
Query: 375 IGQDVFESMKHFYEFG 390
G +HF G
Sbjct: 143 RGSTG----EHFLSGG 154
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 17/158 (10%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS--- 293
++D + + + G + ++ + + G G D + N+ NV +
Sbjct: 384 AFSDEWLDAQSGAAGTTGTDDNDLFVGSEPL---TSGGLGRDFFVLNAVANVASGGADAD 440
Query: 294 ------GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
GND +G SG D F A F++ + D N + + +
Sbjct: 441 FMVGSAGNDTLNGDSGNDRIFGDAAPGTEFFATFDDPTVSDDDNLFGGT----GDDIVYG 496
Query: 348 DQCIDSVNVKQRSILEYTAS-YEDLIQVIGQDVFESMK 384
+ D + + + L + + L G D E
Sbjct: 497 GRGDDLIEGNEDNDLLFGEDGNDTLRGGHGIDRLEGGA 534
Score = 42.0 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 48/162 (29%), Gaps = 4/162 (2%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + +Y GDDL++ G N + + ++ G
Sbjct: 472 ATFDDPTVSDDDNLFGGTGDDIVYGGRGDDLIE----GNEDNDLLFGEDGNDTLRGGHGI 527
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G G D + G + N+ +G D+F +G
Sbjct: 528 DRLEGGAGSDELSGGDGADELTGGTGNDTLNGGAGEDIFAFKTGDGQDVISDFDPANDTI 587
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
++ + + + D++ V+ SI
Sbjct: 588 HINGDVLDPTVPTSGITLIEQGDNVLITYGSNDTILVENLSI 629
>gi|148704402|gb|EDL36349.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_b [Mus
musculus]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|146280079|ref|YP_001170236.1| sulfate ABC transporter, periplasmic sulfate-binding protein
[Rhodobacter sphaeroides ATCC 17025]
gi|145558320|gb|ABP72931.1| sulfate ABC transporter, periplasmic sulfate-binding protein
[Rhodobacter sphaeroides ATCC 17025]
Length = 485
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVV 280
I G D LD GG L + + G + + + + G +G+D +
Sbjct: 332 ISGGAGHDRLD--GRGGRDV---LQGGTGDDLLRGGPGDDGLFGGAGRDRLEGGAGHDRL 386
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + N+V +G+DV G +G D A + ++ R + ++ D N
Sbjct: 387 YGGAGNDVLLGGAGDDVLRGHAGGDRLHGGAGADVFVYRRGDGGDLILDFNR 438
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +GNDV++G + ++V +G D G +G D F Y I F
Sbjct: 379 GGAGHDRLYGGAGNDVLLGGAGDDVLRGHAGGDRLHGGAGADVFVYRRGDGGDLILDFNR 438
Query: 324 AIIVYDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A + D +H+ ++ + F +V L+
Sbjct: 439 AHDLIDLPLHLDHRMRAVAGDTLIDFGGGDRLTVRGILPDALD 481
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 32/119 (26%), Gaps = 10/119 (8%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--- 320
E + G +G+D + G +V +G+D+ G G D F A +
Sbjct: 325 GGAGPERISGGAGHDRLDGRGGRDVLQGGTGDDLLRGGPGDDGLFGGAGRDRLEGGAGHD 384
Query: 321 --FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ A D L A + DLI +
Sbjct: 385 RLYGGAGNDVLLGGAGDDVLRG-----HAGGDRLHGGAGADVFVYRRGDGGDLILDFNR 438
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ + + G G DV+ G + +++ G+D G +G D A
Sbjct: 332 ISGGAGHDRLDGRGGRDVLQGGTGDDLLRGGPGDDGLFGGAGRDRLEGGAGHDRLY-GGA 390
Query: 322 ENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYE 369
N +++ A + + +RL AD + IL++ +++
Sbjct: 391 GNDVLLGGAGDDVLRGHAGGDRLHGGAGADVFVYRRGDGGDLILDFNRAHD 441
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 32/112 (28%), Gaps = 10/112 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G + + G + ++ G DV G +G D F A
Sbjct: 321 DRLTGGAGPERISGGAGHDRLDGRGGRDVLQGGTGDDLLRGGPGDD----GLFGGAGRDR 376
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L + +L A + L G DVF
Sbjct: 377 LEGGAGHDRLYG------GAGNDVLLGGAGDDVLRGHAGGDRLHGGAGADVF 422
>gi|85703248|ref|ZP_01034352.1| type I secretion target repeat protein [Roseovarius sp. 217]
gi|85672176|gb|EAQ27033.1| type I secretion target repeat protein [Roseovarius sp. 217]
Length = 805
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 21/170 (12%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G+D + G + +I G + I +S+ G +G DV+
Sbjct: 454 IDGGDGNDTI----FGQDDDD---------TIFGGAGDDVIDGGIDNDSIDGGAGADVLT 500
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------KIYRFENAIIVYDANEHKQ 335
G ++ +GND G G D+ ++ + D
Sbjct: 501 GGQGDDTVTGGTGNDTLSGGDGADSLSGGDDRDVFLAAGAGDVIDGGTGDSTDDGVNDDF 560
Query: 336 DF--LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D L + R Q +D+ + + + + + E++
Sbjct: 561 DTLDLRGLGRFDIVGQTVDADGDSTSGTVNFLGTDGAVTGSLQFTEIENL 610
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 16/184 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-----------IGGYEKNMTIA 263
+I G+D +D DL + + G + + I
Sbjct: 313 GGDGADSILGGAGNDTIDSGSPVSTGPLPDLGFGTIVPADPDPENDRDFVSGGDGDDVIL 372
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY---R 320
+++ G +G DV+ G ++ GND G G DT A +
Sbjct: 373 TGDDADTITGGTGADVIDGGIDADLIDGDEGNDTLIGGEGSDTINGGAGDDVIYGGLDPS 432
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F + + DA + + D + + + D + A + + I D
Sbjct: 433 FPDEFNIPDATDPEPD--NGRDLIDGGDGNDTIFGQDDDDTIFGGAGDDVIDGGIDNDSI 490
Query: 381 ESMK 384
+
Sbjct: 491 DGGA 494
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 22/184 (11%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ + G + I++ + G ++ ++++G G+D ++G ++
Sbjct: 257 IRYSDEAGTSDGINVTDVYF----GLPGSVIDTGLPGDDTLIGGDGDDTLLGEIGDDSLI 312
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--HKQDFLSDVE----RL 344
G D G +G DT +P + IV + + +DF+S + L
Sbjct: 313 GGDGADSILGGAGNDTIDSGSPVSTGPLPDLGFGTIVPADPDPENDRDFVSGGDGDDVIL 372
Query: 345 RFADQCIDSVNVKQ--------RSILEYTASYEDLIQVIGQD-VFESMKHFYEFGLSEGR 395
D + +++ + LI G D + +G G
Sbjct: 373 TGDDADTITGGTGADVIDGGIDADLIDGDEGNDTLIGGEGSDTINGGAGDDVIYG---GL 429
Query: 396 DITF 399
D +F
Sbjct: 430 DPSF 433
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 52/150 (34%), Gaps = 6/150 (4%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++ +N ID+ + + N + + V G G+D ++ + ++ F
Sbjct: 3 INRIDGDNTENRIDIAYTADPEGDRIDANDA-PDGSNDDVVDGLGGDDTILAGAGDDTVF 61
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE----HKQDFLSDVERLRF 346
SG+D +G +G D P D N+ D ++ +
Sbjct: 62 AGSGSDSVEGGAGNDLLVGDTPDPAAGGREVFQWSEAPDPNDADPIDAGDPITGFTQNTG 121
Query: 347 A-DQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ D + + + A+ +D+ V+
Sbjct: 122 SVDVTFSVLKTSVTNDTTFGANTQDVSGVV 151
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 54/191 (28%), Gaps = 37/191 (19%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D+ L G + I T + GG + ++ I ++++G G+D + G + +
Sbjct: 364 GGDGDDVILTGDDADTITGGTGADVIDGGIDADL-IDGDEGNDTLIGGEGSDTINGGAGD 422
Query: 287 NVFFES-----------------------------SGNDVFDGSSGLDTFFYYAPS---- 313
+V + GND G DT F A
Sbjct: 423 DVIYGGLDPSFPDEFNIPDATDPEPDNGRDLIDGGDGNDTIFGQDDDDTIFGGAGDDVID 482
Query: 314 ---YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
I A ++ DS++ + A D
Sbjct: 483 GGIDNDSIDGGAGADVLTGGQGDDTVTGGTGNDTLSGGDGADSLSGGDDRDVFLAAGAGD 542
Query: 371 LIQVIGQDVFE 381
+I D +
Sbjct: 543 VIDGGTGDSTD 553
>gi|153802232|ref|ZP_01956818.1| hypothetical protein A51_B1612 [Vibrio cholerae MZO-3]
gi|124122214|gb|EAY40957.1| hypothetical protein A51_B1612 [Vibrio cholerae MZO-3]
Length = 1492
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 1189 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 1243
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 1244 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 1303
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 1304 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 1363
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 1364 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 1416
>gi|325131962|gb|EGC54662.1| iron-regulated protein FrpC [Neisseria meningitidis M6190]
Length = 415
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N +I +++ G GND + G + N+V GND +G G DT A
Sbjct: 18 LNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAG 77
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYT 365
+ + + + QD + + + +RF D + R
Sbjct: 78 NDYLEGSSGSDTYVF--GKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLL 135
Query: 366 ASYED 370
+D
Sbjct: 136 IKAKD 140
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKI 209
++ S +V SYF S + V D+ V+K+ + + G++ Y+
Sbjct: 139 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKL--VQQSTDGSDRLYAYQS 196
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+Y + GDDLL+ G N +I +
Sbjct: 197 GSTLNGGLGDDYLYGADGDDLLN----------------------GDAGNDSIYSGNGND 234
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + N+V GND +G G DT A + + + +
Sbjct: 235 TLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF-- 292
Query: 330 ANEHKQDFLSD 340
QD + +
Sbjct: 293 GKGFGQDTVYN 303
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 44/127 (34%), Gaps = 22/127 (17%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+IY G+D LD G E N + + + + G
Sbjct: 19 NGDAGNDSIYSGNGNDTLD----------------------GGEGNDALYGYNGNDVLNG 56
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + G N+ +GND +GSSG DT+ + +Y ++ A D
Sbjct: 57 GEGNDHLNGEDGNDTLIGGAGNDYLEGSSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRF 116
Query: 334 KQDFLSD 340
+D
Sbjct: 117 TDGITAD 123
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G +++ +GND +G DT + Y + + +
Sbjct: 199 TLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGE 258
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N+H + + A + + +D + D HF F
Sbjct: 259 GNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGF 318
Query: 390 GLS 392
+
Sbjct: 319 KAA 321
>gi|260428680|ref|ZP_05782658.1| bifunctional hemolysin/adenylate cyclase [Citreicella sp. SE45]
gi|260420274|gb|EEX13526.1| bifunctional hemolysin/adenylate cyclase [Citreicella sp. SE45]
Length = 601
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 44/143 (30%), Gaps = 20/143 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T++ G D L G + G + N ++
Sbjct: 404 GGNDTVIGRTGWDTLWGDDGHDHL----YGSEGQD---------DLHGGDGNDYLSGGFG 450
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G +G+D + GN N+ GND G++G DT A + + +
Sbjct: 451 YDFLWGDAGDDSLYGNLGNDSLDGGVGNDALYGATGNDTLRGGAGHDTL----YSSQGVD 506
Query: 328 YDANEHKQDFLSD---VERLRFA 347
D L V+ FA
Sbjct: 507 ELEGGPGDDLLFGGSLVDSFHFA 529
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 9/144 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ +++ G +G+D +IG ++ F +G+D DG +G DT + A
Sbjct: 310 LDGTIGHDRLSGSAGNDTLAGGAGDDTLIGGDDHDQLFGEAGDDSLDGGAGADTLWGDAG 369
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ F N + D++S V+ + + L ++
Sbjct: 370 ND----TIFGNTGVDEVHGGLGDDWISPGDGVDIVHGDGGNDTVIGRTGWDTLWGDDGHD 425
Query: 370 DLIQVIGQDVFES--MKHFYEFGL 391
L GQD + G
Sbjct: 426 HLYGSEGQDDLHGGDGNDYLSGGF 449
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 8/134 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+A ++++G +D + G + ++ +G D G +G DT F
Sbjct: 319 LSGSAGNDTLAGGAGDDTLIGGDDHDQLFGEAGDDSLDGGAGADTLWGDAGNDTIFGNTG 378
Query: 313 SYLYKIYRFENAIIVYDA-----NEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEY 364
++ I D + D + + + L D + + L
Sbjct: 379 VDEVHGGLGDDWISPGDGVDIVHGDGGNDTVIGRTGWDTLWGDDGHDHLYGSEGQDDLHG 438
Query: 365 TASYEDLIQVIGQD 378
+ L G D
Sbjct: 439 GDGNDYLSGGFGYD 452
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 50/173 (28%), Gaps = 14/173 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T++ G+D + + G + I+ ++
Sbjct: 352 DDSLDGGAGADTLWGDAGNDTI-------------FGNTGVDEVHGGLGDDWISPGDGVD 398
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V G GND VIG + + + G+D GS G D + Y F + D
Sbjct: 399 IVHGDGGNDTVIGRTGWDTLWGDDGHDHLYGSEGQDDLHGGDGND-YLSGGFGYDFLWGD 457
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A + + L L A ++ L G D E
Sbjct: 458 AGDDSLYGNLGNDSLDGGVGNDALYGATGNDTLRGGAGHDTLYSSQGVDELEG 510
Score = 40.9 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 21/133 (15%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF----------- 321
G ++ + + +++ F+ +G+D G +G D F + A I F
Sbjct: 227 GGDRSEALSAGAGDDLLFDGAGSDTLTGGTGADLFVFAADGSRDVITDFMETDMLGLPRV 286
Query: 322 -------ENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D L +RL + L ++ L
Sbjct: 287 PRPVVTTAGLPSTERTGGDGADVLDGTIGHDRLSGSAGNDTLAGGAGDDTLIGGDDHDQL 346
Query: 372 IQVIGQDVFESMK 384
G D +
Sbjct: 347 FGEAGDDSLDGGA 359
>gi|126323935|ref|XP_001378518.1| PREDICTED: similar to membrane-type-4 matrix metalloproteinase
[Monodelphis domestica]
Length = 589
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 30/135 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEETSI-HS 77
W+ + ++ + ++ R +AL WS + L F E + ++
Sbjct: 119 WNKRNLSWRVRTFPRD---------SSLGRDTVRALMYYALKVWSDITPLNFHEVAGSNA 169
Query: 78 DIKFISS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILS 121
DI+ S N+GY + + +FD + W + GT L
Sbjct: 170 DIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSSDAHGTDLF 229
Query: 122 HNALHEIGHALGLMH 136
A+HE GHA+GL H
Sbjct: 230 AVAVHEFGHAIGLTH 244
>gi|13591995|ref|NP_112318.1| matrix metalloproteinase-14 [Rattus norvegicus]
gi|146345458|sp|Q10739|MMP14_RAT RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT-MMP; Short=MT1-MMP; Short=MT1MMP; Flags:
Precursor
gi|1001927|emb|CAA62897.1| membrane-type metalloproteinase [Rattus norvegicus]
gi|47939003|gb|AAH72509.1| Mmp14 protein [Rattus norvegicus]
gi|149063898|gb|EDM14168.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a
[Rattus norvegicus]
gi|149063899|gb|EDM14169.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a
[Rattus norvegicus]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|70733640|ref|YP_257280.1| calcium-binding outer membrane-like protein [Pseudomonas fluorescens
Pf-5]
gi|68347939|gb|AAY95545.1| calcium-binding outer membrane-like protein [Pseudomonas fluorescens
Pf-5]
Length = 4920
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 47/132 (35%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V YI + + G ++ N T+ + + G GND++ G N++ +G
Sbjct: 4736 TTSNVHQYITEHYTEFDVSGSHDGNDTLLGGAGNDILFGQGGNDLLDGGKGNDILLGGTG 4795
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G G D + + + + V + + D+ L +
Sbjct: 4796 NDTLIGGQGNDILIGGSGADTFVWKAGDTGNDVIKDFKASEGDRIDLRDLLQGESASTID 4855
Query: 355 NVKQRSILEYTA 366
N + + ++ +
Sbjct: 4856 NFLKITTVDGVS 4867
>gi|74201105|dbj|BAE37413.1| unnamed protein product [Mus musculus]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|1495995|emb|CAA62432.1| MT-MMP protein [Homo sapiens]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|320665233|gb|EFX32326.1| hypothetical protein ECOSU61_23275 [Escherichia coli O157:H7 str.
LSU-61]
Length = 6925
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 6701 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 6754
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 6755 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 6814
Query: 319 YRFENAII 326
+ ++
Sbjct: 6815 GGNGSDVV 6822
>gi|119484721|ref|ZP_01619203.1| hypothetical protein L8106_14650 [Lyngbya sp. PCC 8106]
gi|119457539|gb|EAW38663.1| hypothetical protein L8106_14650 [Lyngbya sp. PCC 8106]
Length = 359
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 14/128 (10%)
Query: 226 GGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMT--------IAQHTVIE-SV 271
GG+D ++ ++ N + L +I G + N I + E ++
Sbjct: 39 GGEDTVNGSIDSELIIVNQGNDLVLGENGNDTIFGGKNNDALEGEMGNDILFGNLGEDTL 98
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G +D + G N+ SGND G G DT ++ + I V
Sbjct: 99 IGGENDDSLFGGQENDQLTGGSGNDTLYGDLGADTLTGGFGVDIFGLRENGQGIDVITDF 158
Query: 332 EHKQDFLS 339
E D +
Sbjct: 159 EDGVDLMQ 166
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 4/96 (4%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L ++ G + I + + V+G +GND + G N+ GND+ G+ G
Sbjct: 36 LTLGGEDTVNGSIDSELIIVNQGNDLVLGENGNDTIFGGKNNDALEGEMGNDILFGNLGE 95
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
DT F D L
Sbjct: 96 DTLIGGENDDSL----FGGQENDQLTGGSGNDTLYG 127
>gi|316935444|ref|YP_004110426.1| outer membrane adhesin like proteiin [Rhodopseudomonas palustris
DX-1]
gi|315603158|gb|ADU45693.1| outer membrane adhesin like proteiin [Rhodopseudomonas palustris
DX-1]
Length = 1551
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 17/108 (15%)
Query: 254 GGYEKNMTIAQHTV--IESVVGSSGNDVVIG---------NSANNVFFESSGNDVFDGSS 302
G I ++ IE V+G SGND +IG N+ ++ G+DV G +
Sbjct: 1403 SGRASGDEIGYDSLRNIEIVLGGSGNDTLIGDSNANTLVGNAGDDALIGGGGDDVLRGGT 1462
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVY------DANEHKQDFLSDVERL 344
G DT A + A+ + D + +E
Sbjct: 1463 GDDTIDGGAGFDTLDLSDATGAVTISFTAGTATGAGIGTDHFTGIESF 1510
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N I + + G+ G+D +IG S ++ G DV G G D
Sbjct: 269 VRAGAGNDVIYGDAGNDLLFGAGGSDQLIGGSGDDFLDGGEGTDVLTGGVGNDVIVATGD 328
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++ + + + A+ + D ++
Sbjct: 329 EVIFHTGDGIDLVSLDSASTIRLDGVTSANV 359
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 6/134 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI + + G G+D+++G ++ +G+D+ G +G D
Sbjct: 1325 VFGVAGNDTIDGGAGDDRIDGGHGDDILVGGDGDDELIGGAGSDILVGGAGDDELDGGDG 1384
Query: 313 SYLYKIYRFENAIIV------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + +E D L ++E + + + L A
Sbjct: 1385 HDVADYTADSAGFVADLSSGRASGDEIGYDSLRNIEIVLGGSGNDTLIGDSNANTLVGNA 1444
Query: 367 SYEDLIQVIGQDVF 380
+ LI G DV
Sbjct: 1445 GDDALIGGGGDDVL 1458
>gi|307150522|ref|YP_003885906.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306980750|gb|ADN12631.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 1012
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 67/218 (30%), Gaps = 24/218 (11%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTES----W 250
G+ GNNI + G+D + G I L+ +
Sbjct: 600 TGNTGNNILTGNSGNNILNGKEGADILIGDAGNDTYVVDNAG--DQVIETLDQGTDTVQA 657
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSG--NDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S +N+ I T ++ G+ N+ + GN+ NN + + GND +G +G DT
Sbjct: 658 SIDYTLPENVEILTLTESNNLTGTGNLLNNTLWGNTGNNSLYGAQGNDYINGKAGADTLT 717
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLS---------DVERLRFADQCIDSVNVK-Q 358
+ Y + + +I + D + +VE L +
Sbjct: 718 GGEGNDSYVVDNAGDQVI--ETLNQGTDTVQTSMNYTLPENVEYLILTGTDSVTGTGNVL 775
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ L L G D EG D
Sbjct: 776 NNTLWGNTGNNSLYGAQGNDNLNGKAGADTLTGGEGND 813
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 14/157 (8%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG--VKNYID------- 244
+YGA N + + D+ GD +++ G V+ ID
Sbjct: 788 LYGAQGNDNLNGKAGADTLTGGEGNDSYVVDNAGDQVIETVAQGTDKVQASIDYILPENV 847
Query: 245 ----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
L S G N + + ++ G GND + GN ++ +GND+ G
Sbjct: 848 EHLTLTGTDNLSGSGNLVNNYLTGNAGNNTLSGGDGNDTLSGNDGDDTLIGGNGNDLVTG 907
Query: 301 SSGLDTFFYYAP-SYLYKIYRFENAIIVYDANEHKQD 336
+G D F + + + I F D
Sbjct: 908 GNGNDVFLFESRIEGIDTIQDFSITNDTIQIRRSGFD 944
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 60/200 (30%), Gaps = 16/200 (8%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ N Y +P + G + TL V +
Sbjct: 539 NDNTNENTEY--FTVNLSNPLNGLLIQPVGTATISDTLFSSVSVT----------LPSGV 586
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N+T+ I + G++GN+++ GNS NN+ G D+ G +G DT+ + +
Sbjct: 587 ENLTLTGSNNI-NGTGNTGNNILTGNSGNNILNGKEGADILIGDAGNDTYVVD--NAGDQ 643
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + +VE L + + + L L G
Sbjct: 644 VIETLDQGTDTVQASIDYTLPENVEILTLTESNNLTGTGNLLNNTLWGNTGNNSLYGAQG 703
Query: 377 QDVFESMKHFYEFGLSEGRD 396
D EG D
Sbjct: 704 NDYINGKAGADTLTGGEGND 723
>gi|291281394|ref|YP_003498212.1| hypothetical protein G2583_0601 [Escherichia coli O55:H7 str. CB9615]
gi|290761267|gb|ADD55228.1| hypothetical protein G2583_0601 [Escherichia coli O55:H7 str. CB9615]
Length = 6925
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 6701 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 6754
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 6755 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 6814
Query: 319 YRFENAII 326
+ ++
Sbjct: 6815 GGNGSDVV 6822
>gi|262161765|ref|ZP_06030783.1| rTX toxin putative [Vibrio cholerae INDRE 91/1]
gi|262028497|gb|EEY47152.1| rTX toxin putative [Vibrio cholerae INDRE 91/1]
Length = 2233
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 1930 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 1984
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 1985 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 2044
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 2045 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 2104
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 2105 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 2157
>gi|73962349|ref|XP_856947.1| PREDICTED: similar to matrix metalloproteinase 14 preproprotein
isoform 2 [Canis familiaris]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 141 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 200
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 260
Query: 149 VDNDYEN 155
D EN
Sbjct: 261 QWMDTEN 267
>gi|793763|dbj|BAA05519.1| membrane-type matrix metalloproteinase [Homo sapiens]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|253998404|ref|YP_003050467.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
gi|253985083|gb|ACT49940.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
Length = 863
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I++ + G + ++ +++ SGND + GN+ ++ GND+ D
Sbjct: 2 ATTINVGGSVDNRSNGLKGDINYVGSAANNTILAGSGNDTLAGNAGDDYLDGGIGNDLLD 61
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
G +G DT A + Y + + ++ + + D +
Sbjct: 62 GGTGSDTLIGGAGNDTYVVDDSGD--VLVENAKQGTDTIV 99
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 72/194 (37%), Gaps = 20/194 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDD-------LLDLTLIGGVKNYIDLNTESWSSIGG 255
G+++Y I+ + D+GGDD DL+ +++ + S S+IG
Sbjct: 201 GDDLYIIDS------IYDVVVDTGGDDDEVHASISFDLSKNLELEHLVLTGAASISAIGN 254
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N +A +T + G +G D ++G++ N+ G D G G D ++ A L
Sbjct: 255 DSNNY-LAGNTGNNLMDGGAGADYLVGDAGNDTLKGGDGADTLIGGVGNDIYYADANDNL 313
Query: 316 YKIYRFENAIIVYDANEH------KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ I+ + + ++ E + + V + +
Sbjct: 314 LENASQGIDTIILTSADGLSSFDLSYGIFANFENFDLSKTGAVAFEVDGNTANNILTGND 373
Query: 370 DLIQVIGQDVFESM 383
+ GQD +S+
Sbjct: 374 GANALSGQDGNDSL 387
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 3/147 (2%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D D G I + + I G + N T++ + + +VG GND ++G
Sbjct: 121 FDISMIDTTSFNFEGNSSANILTGNDGKNEIYGLDGNDTLSGNAGDDYLVGGKGNDSLMG 180
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + GND G G D + + +Y + D ++E
Sbjct: 181 GADADTLDGGVGNDSLSGGDGDDLYIIDS---IYDVVVDTGGDDDEVHASISFDLSKNLE 237
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYE 369
S++ Y A
Sbjct: 238 LEHLVLTGAASISAIGNDSNNYLAGNT 264
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 48/154 (31%), Gaps = 11/154 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY- 310
+ G N TI + +++ G++G+D + G N++ +G+D G +G DT+
Sbjct: 23 NYVGSAANNTILAGSGNDTLAGNAGDDYLDGGIGNDLLDGGTGSDTLIGGAGNDTYVVDD 82
Query: 311 --------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
A I + I + + + + +IL
Sbjct: 83 SGDVLVENAKQGTDTIVLAADLGITTFSLSGAFKNYENFDISMIDTTSFNFEGNSSANIL 142
Query: 363 EYTASYEDLIQVIGQDVFESMK--HFYEFGLSEG 394
++ + G D + G
Sbjct: 143 TGNDGKNEIYGLDGNDTLSGNAGDDYLVGGKGND 176
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 9/125 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+IY + S G D + LT G+ ++ DL+ +++ ++ + T
Sbjct: 301 GNDIYYADANDNLLENA-----SQGIDTIILTSADGLSSF-DLSYGIFANFENFDLSKT- 353
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
V V G++ N+++ GN N GND G G DT A S +
Sbjct: 354 --GAVAFEVDGNTANNILTGNDGANALSGQDGNDSLMGGRGNDTLTGGAGSDTLVGGAND 411
Query: 323 NAIIV 327
+ +V
Sbjct: 412 DNYVV 416
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 63/199 (31%), Gaps = 28/199 (14%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ DS + + + ++ + + G N I IG ++ +
Sbjct: 468 NLNATLVDSSVLLNLTGNAANNTIAGSGAG---NKILGLGGDDILIGDELGDIVAGGNDT 524
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII- 326
++ G +GND + G + ++ +G D G G D + + I E+ +
Sbjct: 525 LD---GGAGNDALYGGAGDDSLVGGTGQDTLVGGEGNDRYVVNLLTSGTSIGSLEDNVTE 581
Query: 327 ------------------VYDANEHKQDFLSDVERLRFADQC---IDSVNVKQRSILEYT 365
Y + D ++E L + + + + + L+
Sbjct: 582 DTSAGTDTVYLIGNVKLSAYQMFDLTTDTFLNIEHLDISGTGSSKFNILGSDESNSLKGN 641
Query: 366 ASYEDLIQVIGQDVFESMK 384
A+ L IG D +
Sbjct: 642 AAANLLDGGIGNDTLDGAA 660
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 76/233 (32%), Gaps = 17/233 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQ-----TIYDSGGDDLLDLTLIG--GVKNYIDLNTESWSSI-- 253
GN+ Y + + + T S G D + L DL T+++ +I
Sbjct: 557 GNDRYVVNLLTSGTSIGSLEDNVTEDTSAGTDTVYLIGNVKLSAYQMFDLTTDTFLNIEH 616
Query: 254 ----GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G I S+ G++ +++ G N+ ++G D G +G D ++
Sbjct: 617 LDISGTGSSKFNILGSDESNSLKGNAAANLLDGGIGNDTLDGAAGADTLVGGAGDDIYYV 676
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ +VY +N +VE L + + +++ A
Sbjct: 677 DNKLDMVTESADGGTDMVY-SNLATYILADNVENLSIDTKGVSGTGNSLDNLIVGNAKAN 735
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGA 421
L+ G D + EG DI FD+ L D F A
Sbjct: 736 TLVGGDGNDTLNGGLGSDKLTGGEGEDIFVFDTA--LKGNIDTITDFHVGEDA 786
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 14/155 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDD--LLDLTLIGGVKNYIDLNTESWSSIGGYE-----KNMTI 262
+ T+ GDD +D L ++ +S++ Y +N++I
Sbjct: 653 NDTLDGAAGADTLVGGAGDDIYYVDNKLDMVTESADGGTDMVYSNLATYILADNVENLSI 712
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
V S G+S +++++GN+ N GND +G G D ++
Sbjct: 713 DTKGV--SGTGNSLDNLIVGNAKANTLVGGDGNDTLNGGLGSDKLTGGEGEDIFVF---- 766
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + DF + D ++
Sbjct: 767 -DTALKGNIDTITDFHVGEDAFNLDDAIFGGLSNG 800
>gi|148241991|ref|YP_001227148.1| hypothetical protein SynRCC307_0892 [Synechococcus sp. RCC307]
gi|147850301|emb|CAK27795.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 789
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 36/200 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSS----------- 252
+ + + G+D L D + G N I+LN W +
Sbjct: 589 NDSLQGASGNDQLIGGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTREGRDRLVSI 648
Query: 253 -----------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ G N T++ + +S+ G++G+D ++G + ++ SGND G
Sbjct: 649 ESVNAGGGNDVVTGNRGNNTLSGQSGNDSLRGAAGSDYLLGGNGSDRLIGGSGNDRLVGG 708
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
SG D + + + + D + +D++ V+ R+
Sbjct: 709 SGNDRLVGGSGRDTFVLSEGAGYDRISDFRNGQDRIQVG--------AGVDNLRVQNRNG 760
Query: 362 LEYTASYEDLIQVIGQDVFE 381
Y DL+ V+ +
Sbjct: 761 HAYVYEGRDLMAVVQGGAGD 780
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 68/203 (33%), Gaps = 24/203 (11%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESW 250
++YG + ++ + Y SGG +D + + ID S
Sbjct: 490 QLYGEAD---DDRLFGGSGNDVLNGGTGADYMSGGAGNDTY---YVDNENDIIDDRGLS- 542
Query: 251 SSIGG--YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S + + + IES VG++ N+ + GNS+NN +GND G+SG D
Sbjct: 543 SDVDTVVLQGAVRFTLGNGIESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQLI 602
Query: 309 YYAPSYLYKIYRFENAIIVYDANE-------------HKQDFLSDVERLRFADQCIDSVN 355
A + + + + + +D L +E +
Sbjct: 603 GGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTREGRDRLVSIESVNAGGGNDVVTG 662
Query: 356 VKQRSILEYTASYEDLIQVIGQD 378
+ + L + + L G D
Sbjct: 663 NRGNNTLSGQSGNDSLRGAAGSD 685
Score = 41.6 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 27/153 (17%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
S Y + +++ D+G G+D L + S S+ G E
Sbjct: 177 NASAAQQSYSANAVLSATGVERSMIDTGDGNDTLHI-------------LASASTYYGSE 223
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++ +V SG+D + N DG +G DT +
Sbjct: 224 LGVGLSSSSV----TLGSGDDNFY-------LHGNYENSSVDGGTGFDTLTLSRGTASSV 272
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ R + ++ V + N+ L +ER+ FAD
Sbjct: 273 VSRQDGSLSVSNGNQSL--ILQGIERINFADGT 303
>gi|89052501|ref|YP_507952.1| hypothetical protein Jann_0010 [Jannaschia sp. CCS1]
gi|88862050|gb|ABD52927.1| hypothetical protein Jann_0010 [Jannaschia sp. CCS1]
Length = 425
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 52/171 (30%), Gaps = 41/171 (23%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYI-------------DLNTESWSSIGGYEKNMT-- 261
TI + D L +TL GG DL+ ++S++ + N
Sbjct: 24 DGNSTINATAVSDTLQITLTGGSITITDTTTSVSTTFTNADLSGGAFSNVVQFRGNDADN 83
Query: 262 IAQHTVIESV----------------------VGSSGNDVVIGNSANNVFFESSGNDVFD 299
I +V + G G+D +IG + +N + G+D+
Sbjct: 84 IIGGSVGLNGQGYRGGSGDDQLTDDGNLGGQMRGGRGDDTIIGGTGDNQIRGNGGDDLLI 143
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
G SG + + + +I D + E F D
Sbjct: 144 GGSGNNNLIGGSGDDTLIGDQGSGNLI----GGSGDDLIITSELTTFVDGG 190
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT--IAQHTVIESVVGSSGNDVVIGNS 284
G+D ++ N S + N+ + ++++G +G++ + GN
Sbjct: 78 GNDADNIIGGSVGLNGQGYRGGSGDDQLTDDGNLGGQMRGGRGDDTIIGGTGDNQIRGNG 137
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+++ SGN+ G SG DT S ++ II + D + +
Sbjct: 138 GDDLLIGGSGNNNLIGGSGDDTLIGDQGSGNLIGGSGDDLIITSELTTFVDGGSGDNQMI 197
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 31/79 (39%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I + + ++G SGN+ +IG S ++ G+ G SG D +
Sbjct: 126 GGTGDNQIRGNGGDDLLIGGSGNNNLIGGSGDDTLIGDQGSGNLIGGSGDDLIITSELTT 185
Query: 315 LYKIYRFENAIIVYDANEH 333
+N +I+ +
Sbjct: 186 FVDGGSGDNQMIIPENATF 204
>gi|300900567|ref|ZP_07118731.1| type 1 secretion target domain protein [Escherichia coli MS 198-1]
gi|300355922|gb|EFJ71792.1| type 1 secretion target domain protein [Escherichia coli MS 198-1]
Length = 3292
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 3068 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 3121
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 3122 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 3181
Query: 319 YRFENAII 326
+ ++
Sbjct: 3182 GGNGSDVV 3189
>gi|114652041|ref|XP_001157686.1| PREDICTED: matrix metalloproteinase-14 isoform 4 [Pan troglodytes]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|804994|emb|CAA58519.1| MT-MMP [Homo sapiens]
gi|40675475|gb|AAH64803.1| Matrix metallopeptidase 14 (membrane-inserted) [Homo sapiens]
gi|54781371|gb|AAV40837.1| matrix metalloproteinase 14 (membrane-inserted) [Homo sapiens]
gi|158256086|dbj|BAF84014.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|149202706|ref|ZP_01879678.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
gi|149143988|gb|EDM32022.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
Length = 573
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 59/214 (27%), Gaps = 48/214 (22%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-----------IGGYEKNMTIAQHTVI 268
TI G+D +D DL + + G + + I
Sbjct: 93 DTIDGGAGNDTIDSGTSTSTLPLPDLGFGTTVPADLDPENDRDLVFGGDGDDVITTGDDA 152
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------------- 314
+++ G +G D++ G +V GND GS G DT A
Sbjct: 153 DTISGGAGADLIDGGIDADVIDGDDGNDTLIGSEGSDTINGGAGDDVIFGGLEEGFPDSI 212
Query: 315 -----------------------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+ ++ I+ A + D D + + AD
Sbjct: 213 NIPDATDPEPGNGRDLIDGGDGNDTIFGQDDDDTILGGAGDDVIDGGIDNDFIVGADGND 272
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + + A + + +G D +
Sbjct: 273 SLIGGQGDDTITGGAGNDTISGGLGADRLVGLDD 306
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 14/163 (8%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G+D + G + +I G + I + +VG+ GND +I
Sbjct: 229 IDGGDGNDTI----FGQDDDD---------TILGGAGDDVIDGGIDNDFIVGADGNDSLI 275
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANEHKQDFLSD 340
G ++ +GND G G D ++ + + ++ L
Sbjct: 276 GGQGDDTITGGAGNDTISGGLGADRLVGLDDRDVFVDVGAGDTIDGGTGGDDFDTLDLRG 335
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ R Q D + + + + E++
Sbjct: 336 LGRFEIVGQTTDPDGDSTSGTVNFQDRDGTVTGSLVFGEIENL 378
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 58/190 (30%), Gaps = 19/190 (10%)
Query: 222 IYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ + GDDL+DL G ++D + G + +I + V G+D V
Sbjct: 20 VDGTAGDDLIDLGYAGDPDGDFVDNDDALLP--GAAPNDDSIRAGAGDDVVFAGVGDDQV 77
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-----------YD 329
G ++ F G+D DG +G DT + + V
Sbjct: 78 DGADGADLIFGEDGSDTIDGGAGNDTIDSGTSTSTLPLPDLGFGTTVPADLDPENDRDLV 137
Query: 330 ANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK-- 384
D ++ D + + +++ + LI G D
Sbjct: 138 FGGDGDDVITTGDDADTISGGAGADLIDGGIDADVIDGDDGNDTLIGSEGSDTINGGAGD 197
Query: 385 HFYEFGLSEG 394
GL EG
Sbjct: 198 DVIFGGLEEG 207
>gi|47212180|emb|CAF95128.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 21/132 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + ++ S + + + +AL WS + L F E + +DI+
Sbjct: 80 WKKRHLSWRVRSFPKDSPSLGRDTV----RALMHYALKVWSDIAPLDFHEVAGSDADIQI 135
Query: 82 ISSNNGYVCTPRYDSRYF--------------MEINFDKADVWRYGI--GKGTILSHNAL 125
+ + +D + +FD + W + G L A+
Sbjct: 136 DFTKADHRDGYPFDGPGGTVAHAFFPGEKFTAGDTHFDDDEAWTFRSPEADGMDLFAVAV 195
Query: 126 HEIGHALGLMHP 137
HE GHA+GL+H
Sbjct: 196 HEFGHAIGLVHA 207
>gi|298498297|ref|ZP_07008104.1| cadherin domain-containing protein [Vibrio cholerae MAK 757]
gi|297542630|gb|EFH78680.1| cadherin domain-containing protein [Vibrio cholerae MAK 757]
Length = 2479
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 2176 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 2230
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 2231 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 2290
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 2291 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 2350
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 2351 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 2403
>gi|284051791|ref|ZP_06382001.1| Phosphatidylcholine--sterol O-acyltransferase [Arthrospira
platensis str. Paraca]
Length = 475
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 31/216 (14%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK-------DSPFIQTIYDSGGDDLLDLTLI 236
M+SDI+ Q G+ GN++ I SP + I GDD + +
Sbjct: 1 MLSDII-TQNRLDLGLGTSGNDVIIISELPPEQLTRFSSSPLTEAIALLEGDDYI---IN 56
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ I L G + N T+ H+ +++ G GND++IG S NN+ G D
Sbjct: 57 DDPQGRILL---------GNQGNDTLIGHSGNDTIYGGEGNDLIIGGSGNNILSGDRGLD 107
Query: 297 VFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQDFLSDVER------LRFADQ 349
G G++ F S I F+ I D+++ + F +
Sbjct: 108 TLTGGDGINEFILSQSSEDQDLITDFKPGIDKLRLFRGATFSDLDIQQSDLSTVIEFNGE 167
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ ++N + L +D I+ + +
Sbjct: 168 TLATLNNVSANSLT----IDDFIEALNFEEIYIFGD 199
>gi|291568011|dbj|BAI90283.1| putative esterase [Arthrospira platensis NIES-39]
Length = 482
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 31/216 (14%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK-------DSPFIQTIYDSGGDDLLDLTLI 236
M+SDI+ Q G+ GN++ I SP + I GDD + +
Sbjct: 8 MLSDII-TQNRLDLGLGTSGNDVIIISELPPEQLTRFSSSPLTEAIALLEGDDYI---IN 63
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ I L G + N T+ H+ +++ G GND++IG S NN+ G D
Sbjct: 64 DDPQGRILL---------GNQGNDTLIGHSGNDTIYGGEGNDLIIGGSGNNILSGDRGLD 114
Query: 297 VFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQDFLSDVER------LRFADQ 349
G G++ F S I F+ I D+++ + F +
Sbjct: 115 TLTGGDGINEFILSQSSEDQDLITDFKPGIDKLRLFRGATFSDLDIQQSDLSTVIEFNGE 174
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ ++N + L +D I+ + +
Sbjct: 175 TLATLNNVSANSLT----IDDFIEALNFEEIYIFGD 206
>gi|206563980|ref|YP_002234743.1| cable pilus associated adhesin protein [Burkholderia cenocepacia
J2315]
gi|198040020|emb|CAR56001.1| cable pilus associated adhesin protein [Burkholderia cenocepacia
J2315]
Length = 2924
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 56/140 (40%), Gaps = 5/140 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L+ +L+G ++ + S S + G N + + + + G GND++ G + N+
Sbjct: 2719 LNASLLGSTQSASIIEGTSGSDTVTGTSGNDRLYGYGGDDVLNGGDGNDLLRGGAGNDTL 2778
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+GND+ G +G DT A + ++ + + D ++D +
Sbjct: 2779 NGGNGNDILIGGTGNDTLTGGAGTDVFLWEVVGAD----NTGGNGHDVITDFQLASGPTD 2834
Query: 350 CIDSVNVKQRSILEYTASYE 369
+ ++ YTA +
Sbjct: 2835 TSGDKIDLSKLLVGYTADAD 2854
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 58/165 (35%), Gaps = 9/165 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT-VIESVVGSSGNDVVIGNSAN 286
D L+ ++ +S+ G ++ +I + T ++V G+SGND + G +
Sbjct: 2704 TDKTGLSASATAGQLLN------ASLLGSTQSASIIEGTSGSDTVTGTSGNDRLYGYGGD 2757
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V GND+ G +G DT + + + + + + +
Sbjct: 2758 DVLNGGDGNDLLRGGAGNDTLNGGNGNDILIGGTGNDTLTGGAGTDVFLWEVVGADNTGG 2817
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIG--QDVFESMKHFYEF 389
+ + + + DL +++ + H+ +
Sbjct: 2818 NGHDVITDFQLASGPTDTSGDKIDLSKLLVGYTADADGPAHYVDG 2862
>gi|148225975|ref|NP_001079862.1| matrix metalloproteinase 13 [Xenopus laevis]
gi|33585953|gb|AAH56040.1| MGC68994 protein [Xenopus laevis]
Length = 259
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 58/190 (30%), Gaps = 49/190 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI- 79
WS + Y T E + A G WS V L F S +DI
Sbjct: 99 RWSTTQLTYSIVNYTPDLPR-------QLVDEAIKRAFGVWSNVTPLQFTAISSGDADIF 151
Query: 80 -KFI----------SSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHE 127
+F +G + R + +FD+ + W G L A HE
Sbjct: 152 IRFGARAHGDSLPFDGPSGVLAHAYAPGRGIGGDAHFDEDESWTSSRA-GFNLFLVAAHE 210
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYE-NDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GH+LGL H P + +Y D+ S+
Sbjct: 211 FGHSLGLDHS-----TVPQALMFPNYRYEDTATFSL---------------------SQD 244
Query: 187 DIVAVQKIYG 196
DI +Q IYG
Sbjct: 245 DINGIQSIYG 254
>gi|144900306|emb|CAM77170.1| Hemolysin-type calcium-binding region [Magnetospirillum
gryphiswaldense MSR-1]
Length = 3109
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 8/201 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGD---DLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ NN D SG L+ L + + D N S+
Sbjct: 1693 TAGVANNTIAFFTWGGDGYLYVKGTGSGISFDQTLIRLQGVSAAPSR-DGNDAFVSTATA 1751
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +S+ GND + G ++ +G+D+ G G D +Y S
Sbjct: 1752 TMGADEMYGTAGADSISSLGGNDTIYGLGGDDTLHGGAGDDLLHGGDGSDVIYYTDSSLS 1811
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ +E D L+ +E + + + L+ ++L
Sbjct: 1812 VAVNLGMG---TASGDESGFDTLTSIEAVVGSQGADTIIGSSANETLDGYHGADELTGGG 1868
Query: 376 GQDVFESMKHFYEFGLSEGRD 396
G D+F + H + L+ G D
Sbjct: 1869 GADLFV-ISHPVQSNLASGYD 1888
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 55/157 (35%), Gaps = 16/157 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + TI+ + G D + ++LN S + G +++ IE
Sbjct: 1527 NETFQGNGGRDTIHGNDGWDTITFFDTENHGVTVNLNGSSGNDGFGDSDDIS-----GIE 1581
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYYAPSYLYKIYR 320
V+GS D + G N G+ D G +G D+ + S ++ +
Sbjct: 1582 HVIGSKYGDELNGGDGNERLDGRDGDDTITGGGGVDTIVGGAGQDSLTGGSGSDIFIVEN 1641
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + A + DF + +++ F + +
Sbjct: 1642 ASQSTVA--ATDTVTDFGTGQDQVWFTGAAGYAYSTA 1676
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 5/139 (3%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWS 251
A +L + +E ++ G + T GG I + + +
Sbjct: 1915 ATGVTLEQAVASVEALMTPDSIAYFEWEGGAYLYVSGTGSGSVDFGGTLVQIPVQAGAVT 1974
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG V + +VGS G DV+ + ++ +G D+ G +G DTF Y +
Sbjct: 1975 LSGGNTILAATGASVVADILVGSDGVDVIDALAGDDDITGGAGADILTGGAGDDTFLYAS 2034
Query: 312 PSYLYKIYRFENAIIVYDA 330
S + A DA
Sbjct: 2035 ASDGGDVITDFTAGGSEDA 2053
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 13/155 (8%)
Query: 204 NNIYKIEVQQKDSPFIQ-----TIYDSGGDDLL-DLT-----LIGGVKNYIDLNTESWSS 252
+ +Y D F + + GG + D + GG ID+N + +
Sbjct: 1434 DQLYGWTAPVGDRKFTLNGGRGSDHLIGGAGTIADYSDEYRVSEGGAGIRIDVNNVAGTY 1493
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + I VGS+ ND G+ N F + G D G+ G DT ++
Sbjct: 1494 TGTVVTSAGTDLTEGILHFVGSAFNDWFEGSDGNETFQGNGGRDTIHGNDGWDTITFF-D 1552
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ + + N D D +S +E + +
Sbjct: 1553 TENHGVTVNLNGSSGNDGFGDSDD-ISGIEHVIGS 1586
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 12/187 (6%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D I + + G D +D+ + + + N+ ++ G ++ A H + +
Sbjct: 2582 GDDIAGIVVVGAASGSDGVDIWFTTKLSDVSEGNSTRIGTLAGVNTSLITAAHFALADLT 2641
Query: 273 GSS---GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G DV+ G++ ++ +G+DV +G+ G DT + I
Sbjct: 2642 SNTPSVGADVINGSAGTDIIDALAGDDVINGNGGQDTLRGGGGND--SITLTGLVTGTTV 2699
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
A D L+ V A ++ +V I + ++ + + I + F
Sbjct: 2700 AGGLGTDMLTIV-----ASGAVNLQDVGISGIETFDFAHAGVGEEITSVSIGANILANNF 2754
Query: 390 G--LSEG 394
SEG
Sbjct: 2755 SAVWSEG 2761
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 48/170 (28%), Gaps = 36/170 (21%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-----------YIDLNTES 249
S G+ I V + S I G D L T + + IDL +
Sbjct: 2850 STGDGADTITVGGEASLSNTVIDGGDGIDTLAFTGLSSMGAPGYLGTISNIEVIDLTVAN 2909
Query: 250 WSSIGGYEKNMTIAQHTVIESVVG--------------------SSGND-VVIGNSANNV 288
++ Y + A +T + G SG+D + G +
Sbjct: 2910 ATNAIAYARIDGSAANTAVTIRYGHRSSDLAFQDWGADDSLTLVGSGDDNTLTGGVGVDT 2969
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
GND G +G D F + + D + D +
Sbjct: 2970 LIGDEGNDELTGGAGADLFLFTRSQGTSSF----GTDTITDFSSGDGDKI 3015
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 38/157 (24%)
Query: 197 APKGSLGNNIYKIEV-QQKDSPFIQTIY--DSGGDDLLDLTLIG---------------G 238
A G+ G+ +Y++ V + ++PF I D+GG D +D+ ++ G
Sbjct: 1224 ANGGTSGD-VYELSVGENSEAPFAGNIVITDAGGTDTIDVRVLSENTGKDYAFDGALRVG 1282
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV----------------VIG 282
I L+ + G N V SSG+D+ + G
Sbjct: 1283 DDLVIYLDPAAGIGGGTITINDHFNGKGVERLQTESSGDDMYEYLATGLSGTALDEMIFG 1342
Query: 283 ---NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N+ G+D F G GLD+F ++
Sbjct: 1343 TNKNATVETLTGGGGHDQFFGGGGLDSFVGDGFDTVH 1379
>gi|295690837|ref|YP_003594530.1| hemolysin-type calcium-binding region [Caulobacter segnis ATCC
21756]
gi|295432740|gb|ADG11912.1| Hemolysin-type calcium-binding region [Caulobacter segnis ATCC
21756]
Length = 367
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL GG I + ++ G N T+ +++ G G+D + G + +V
Sbjct: 171 TLQGGSGADILIGGAGNDTLDGGSGNDTLTGGAGADTLTGGRGDDTLDGGAGADVLVGGV 230
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDANEHKQDFLSDVE 342
G D+ G +G DT A + + + D+ D + D +
Sbjct: 231 GKDILIGGAGDDTLTGGAGADTLSGGSGADVFVFGASDSLPSAPDHILDFD 281
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 42/146 (28%), Gaps = 19/146 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA------------------NNVFFESSG 294
+ G + N + +++ G+ G+D + G + SG
Sbjct: 118 LTGGDANDHLVGGVGDDTLDGAGGDDSLEGGDGADTLIGGDGDDTLDGGAGADTLQGGSG 177
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D+ G +G DT + + + + D + + L +
Sbjct: 178 ADILIGGAGNDTLDGGSGNDTLT-GGAGADTLTGGRGDDTLDGGAGADVLVGGVGKDILI 236
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVF 380
L A + L G DVF
Sbjct: 237 GGAGDDTLTGGAGADTLSGGSGADVF 262
>gi|221115656|ref|XP_002168433.1| PREDICTED: similar to Matrix metalloproteinase-19 [Hydra
magnipapillata]
Length = 457
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 77/215 (35%), Gaps = 48/215 (22%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLT 69
+ R + ++ ++K LT L+ + L+ + ++ + A W V +L
Sbjct: 59 DNNKSQDSRIRRYTPQGSKWKKLDLTWKLLNDNNDNLSRSQVEDTLQQAFARWEAVTNLR 118
Query: 70 FE--ETSI--HSDI------KF--------ISSNNGYV----CTPRYDSRYFMEINFDKA 107
F E S ++DI +F + G V P + +++F
Sbjct: 119 FHKLEKSSDEYADIDVSFVYRFQQQERDPTLFYGAGNVLAHGYYPNTNKGISGDLHFYDE 178
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
+ G KG L A+HEIGH +GL H N S+M +
Sbjct: 179 TEFTLGTTKGINLLWVAVHEIGHCIGLEHSSVEN-------------------SIM--YP 217
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
M +F T DI+ +Q IYG+ +
Sbjct: 218 QYKGYMGENF----TLSKDDILGIQSIYGSKTQTS 248
>gi|254486240|ref|ZP_05099445.1| hypothetical protein RGAI101_896 [Roseobacter sp. GAI101]
gi|214043109|gb|EEB83747.1| hypothetical protein RGAI101_896 [Roseobacter sp. GAI101]
Length = 816
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 60/175 (34%), Gaps = 7/175 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSS 252
+ + +Y K + +++ D L+ + L GG N
Sbjct: 608 NNGADRLYGDNGNDKLVGGLNSDSLWGGADQDTLEGSAGSDNLYGGAGNDQLFGNAGADI 667
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ +++ G SG+D + G++ ++V G+D+ G++G D
Sbjct: 668 LEGEAGHDRLSGGINNDTIDGGSGDDTLQGDNGSDVLKGGDGDDLLKGNAGHDDLDGGRG 727
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + + DF ++++ L + + Y
Sbjct: 728 NDVLSGGFGVDRFTYGSGQDRIIDFQNEIDTLVLDSALWGGGALSVSQLATYVTQ 782
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 13/175 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D G + + N + + G N + +S+ G + D + G++ +
Sbjct: 589 GGDGFDAIGGGDGNDVLSGNNGAD-RLYGDNGNDKLVGGLNSDSLWGGADQDTLEGSAGS 647
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ + +GND G++G D A N D S + L+
Sbjct: 648 DNLYGGAGNDQLFGNAGADILEGEAGHDRLS----------GGINNDTIDGGSGDDTLQG 697
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGRDITF 399
+ +L+ A ++DL G DV + +G + R I F
Sbjct: 698 DNGSDVLKGGDGDDLLKGNAGHDDLDGGRGNDVLSGGFGVDRFTYGSGQDRIIDF 752
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 55/180 (30%), Gaps = 6/180 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
P + + G D L D + G N + +I G + N
Sbjct: 494 TDTAPGVPMPLNLIGTPGSDTLTGDNADDIIEGRAANDVLSGMGGDDTIFGEDGNDAAYG 553
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + G G+D + G + + G+D G G D + + +
Sbjct: 554 NAGSDVIEGGRGDDAIWGGIGWDTLRGNDGHDKLVGGDGFDAIGGGDGNDVLSGNNGADR 613
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + N+ L+ ADQ + + L A + L G D+ E
Sbjct: 614 LYGDNGNDKLVGGLNSDSLWGGADQDTLEGSAGSDN-LYGGAGNDQLFGNAGADILEGEA 672
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + +A + ++G +GND + GN +++ + +G+D+ G +G D F +
Sbjct: 349 TTGTDSADVLAGDASDDHLLGGAGNDTLSGNGGDDILSDGAGSDLLIGGAGRDRFIFGGD 408
Query: 313 SYLYKIYRFE 322
+ I F+
Sbjct: 409 GAVDTIGDFD 418
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI D G L ++ + L+ SS+ T+ + + G+ DV+
Sbjct: 299 TIADGVGTTLDGVSALSLTVQNGFLHLAVASSVESGLSVFTVDISARVAATTGTDSADVL 358
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G+++++ +GND G+ G D A S L + I + D + D
Sbjct: 359 AGDASDDHLLGGAGNDTLSGNGGDDILSDGAGSDLLIGGAGRDRFIF--GGDGAVDTIGD 416
Query: 341 VER 343
+
Sbjct: 417 FDI 419
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 42/160 (26%), Gaps = 15/160 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D GV ++L S + +IE G + NDV+ G ++
Sbjct: 490 DQPDTDTAPGVPMPLNLIGTPGSDTLTGDN-----ADDIIE---GRAANDVLSGMGGDDT 541
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLR 345
F GND G++G D + D L + +
Sbjct: 542 IFGEDGNDAAYGNAGSDVIEGGRGDDA----IWGGIGWDTLRGNDGHDKLVGGDGFDAIG 597
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D L + L+ + D
Sbjct: 598 GGDGNDVLSGNNGADRLYGDNGNDKLVGGLNSDSLWGGAD 637
>gi|157110199|ref|XP_001650996.1| matrix metalloproteinase [Aedes aegypti]
gi|108883947|gb|EAT48172.1| matrix metalloproteinase [Aedes aegypti]
Length = 646
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 69/187 (36%), Gaps = 55/187 (29%)
Query: 43 DITELNPNA-QEVARWALGEWSKVVDLTFEET-SIHSDIKFISS----NNGY-------- 88
+T+L+ + V AL W++ +LTF E S +DI+ + + +GY
Sbjct: 130 SMTDLDAGQVRRVLHEALDLWAQNANLTFREVYSSEADIQVLFARQFHGDGYKFDGPGKI 189
Query: 89 VCTPRYDSRYFM-EINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ Y + +FD+ + W +GT L A+HE GH+LGL H
Sbjct: 190 LAHAFYPGTGIGGDAHFDEEETWLLNEPLGTEGTRLFDVAVHEFGHSLGLGHS------- 242
Query: 145 PVYGVDNDYENDSFLTSVM------SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S ++M SY D D + +Q IYG
Sbjct: 243 ------------SVKEAIMFPWHHISYRGKDTIPED------------DRLGIQGIYGPK 278
Query: 199 KGSLGNN 205
K + G N
Sbjct: 279 KKTYGRN 285
>gi|254414047|ref|ZP_05027815.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179183|gb|EDX74179.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 1962
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 8/183 (4%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ + G+D L D L GG N + ++ G + + +
Sbjct: 1304 GHKGNDTLDGNAGNDYLEGGVGDDQLTGGEGNDQLYSQSGADTLSGGIGDDLLDGGNSDD 1363
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G G+D + G + N+ ++GND DG +G D + N + +
Sbjct: 1364 ILSGGDGDDQLYGQNGNDTLNGNTGNDYLDGGNGNDQLTGEEGNDRLY-GDNGNDTLNGN 1422
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFY 387
A D ++L D + + L+ + L D+ ++ +
Sbjct: 1423 AGNDLLDGGKGHDQLTGGDGNDQLYGQQGKDTLDGETGNDSLWGGDHNDILLGQAGNDYL 1482
Query: 388 EFG 390
+ G
Sbjct: 1483 DGG 1485
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 59/171 (34%), Gaps = 5/171 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
Q T+ GDDLLD GG + I + + G N T+ +T +
Sbjct: 1335 NDQLYSQSGADTLSGGIGDDLLD----GGNSDDILSGGDGDDQLYGQNGNDTLNGNTGND 1390
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +GND + G N+ + +GND +G++G D N +
Sbjct: 1391 YLDGGNGNDQLTGEEGNDRLYGDNGNDTLNGNAGNDLLDGGKGHDQLTGGD-GNDQLYGQ 1449
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D + + L D + L+ + L G+D
Sbjct: 1450 QGKDTLDGETGNDSLWGGDHNDILLGQAGNDYLDGGKGDDQLDGGEGKDRL 1500
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 16/182 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D LD G N + + + G + + TI + + G GND + G N
Sbjct: 1631 GNDYLD----AGSGNDQLIGGDGNDQLYGQDGDDTINAGVGNDYLEGGLGNDQLTGGDGN 1686
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ + G D+ +G +G D + A + + + + N + +
Sbjct: 1687 DYLYGQDGEDILNGDAGNDNLYGGANNDQLSGGDGNDLLYGEEGN----------DIIDA 1736
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGRDITFDSYLY 404
L + L G D ++ + E GL + + D Y
Sbjct: 1737 GLGDDYLEGGFGDDQLAGGDGNDQLYGQDGDDTIDAGVGNDYLEGGLGDDQLTGGDGDDY 1796
Query: 405 LG 406
L
Sbjct: 1797 LQ 1798
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 14/142 (9%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI G+D L +GG I + G + + T+ +T + ++G +GN
Sbjct: 1802 GNDTIDAGAGNDYL----VGGNGIDILFGQAGDDYLEGGDGDDTLYGNTGNDELIGGNGN 1857
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + +N+ G D+ +G D F A I+ F D+
Sbjct: 1858 DQLYAGEGDNILNGGLGQDLLYSGTGRDMFVLEAGMGEDTIFDF----------TVGFDY 1907
Query: 338 LSDVERLRFADQCIDSVNVKQR 359
L L F D I +
Sbjct: 1908 LGLANGLTFEDLTITQGSGNNA 1929
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 11/142 (7%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+N + S G I ++ IE+++ S +DV+IGN+ NN GNDV G+SG
Sbjct: 1015 INPGTASDGFGTTD---ILRN--IENILASQDDDVIIGNAQNNHLEGLGGNDVLIGNSGN 1069
Query: 305 DTFFYYAPSYLYKIYRFENAII------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
D A R NA+ + D L +VE + ++ +
Sbjct: 1070 DILDGGAGLDTISYRRDPNAVTVNLEQGIATDGWGNSDQLYNVENVIGSNSSDRLIGDAN 1129
Query: 359 RSILEYTASYEDLIQVIGQDVF 380
+ + + + G D+
Sbjct: 1130 ANTIITGTGDDWVEARNGDDII 1151
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 13/155 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G + +P TI G+D + GG + I+ + + G
Sbjct: 620 GDNDKIDGGTGNDVLSGDSGNPGEDTISGGAGNDTI---GGGGNHDIINGDEGNDIIWGD 676
Query: 256 YEKNMTI-----AQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ A +++ G SGND + G + +++ +GND DG +DT
Sbjct: 677 SSFDIIDVRTPAAPGAEGNDTIDGGSGNDEIHGEAGDDLITGGAGNDTIDGGEDIDTIKG 736
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ + + E D + E +
Sbjct: 737 GLGDDSL----YGGSDNDFLMGEAGNDLIDGGEGI 767
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 58/178 (32%), Gaps = 24/178 (13%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D +D GG N I G N TI I+++ G G+D + G S N
Sbjct: 694 GNDTID----GGSGNDEIHGEAGDDLITGGAGNDTIDGGEDIDTIKGGLGDDSLYGGSDN 749
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--------------------FENAII 326
+ +GND+ DG G+DT Y + F
Sbjct: 750 DFLMGEAGNDLIDGGEGIDTVSYENSPNGVIVNSDEVLGYSNPDNTLPIAIEPNFTIQAG 809
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L ++E + + + Q + ++ + LI G D +
Sbjct: 810 TAADGFGTTDTLKNLEDIIGSPFDDVIIGNLQANSIQSLDGNDLLIGNSGNDTIDGGA 867
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 16/166 (9%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D + ++T SSI G N T+ +++ G SG+DV+ G++ N+
Sbjct: 562 NDTIQFINSS-------VDTTQGSSIIGGASNDTLTGGAGGDTIHGESGDDVLEGSAGND 614
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA--------NEHKQDFLS 339
ND DG +G D + + + D +
Sbjct: 615 HITGGGDNDKIDGGTGNDVLSGDSGNPGEDTISGGAGNDTIGGGGNHDIINGDEGNDIIW 674
Query: 340 DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + + + ++ + +++ G D+
Sbjct: 675 GDSSFDIIDVRTPAAPGAEGNDTIDGGSGNDEIHGEAGDDLITGGA 720
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 23/207 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV---KNYIDLNTESWSS--I 253
+G L N+ + D+ +I +D L G ++ D+ S + I
Sbjct: 557 EGGLNNDTIQFINSSVDTTQGSSIIGGASNDTLTGGAGGDTIHGESGDDVLEGSAGNDHI 616
Query: 254 GGYEKNMTIAQHTVIESVVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N I T + + G SGN D + G + N+ +D+ +G G D +
Sbjct: 617 TGGGDNDKIDGGTGNDVLSGDSGNPGEDTISGGAGNDTIGGGGNHDIINGDEGNDIIWGD 676
Query: 311 APSYLYKI------------YRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVN 355
+ + + + E D ++ + + +
Sbjct: 677 SSFDIIDVRTPAAPGAEGNDTIDGGSGNDEIHGEAGDDLITGGAGNDTIDGGEDIDTIKG 736
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFES 382
L + + L+ G D+ +
Sbjct: 737 GLGDDSLYGGSDNDFLMGEAGNDLIDG 763
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 72/216 (33%), Gaps = 24/216 (11%)
Query: 193 KIYGA------PKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLT----LIGGVK 240
+YG + +N+Y Q +Y G+D++D + G
Sbjct: 1688 YLYGQDGEDILNGDAGNDNLYGGANNDQLSGGDGNDLLYGEEGNDIIDAGLGDDYLEGGF 1747
Query: 241 NYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-------- 291
L + + G + + TI + + G G+D + G ++
Sbjct: 1748 GDDQLAGGDGNDQLYGQDGDDTIDAGVGNDYLEGGLGDDQLTGGDGDDYLQGQEGNDTID 1807
Query: 292 -SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+GND G +G+D F A + ++ + N+ + +A +
Sbjct: 1808 AGAGNDYLVGGNGIDILFGQAGDDYLEGGDGDDTLYGNTGNDELIG--GNGNDQLYAGEG 1865
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +N L Y+ + D+ + +++ F
Sbjct: 1866 DNILNGGLGQDLLYSGTGRDMFVLEAGMGEDTIFDF 1901
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 17/161 (10%)
Query: 193 KIYGAP-----KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGV 239
++YG G+ GN++ K Q +Y G D LD +L GG
Sbjct: 1409 RLYGDNGNDTLNGNAGNDLLDGGKGHDQLTGGDGNDQLYGQQGKDTLDGETGNDSLWGGD 1468
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N I L + G + + + + + G G D++ G + ++ ND
Sbjct: 1469 HNDILLGQAGNDYLDGGKGDDQLDGGEGKDRLYGQQGEDILKGGTGDDYLDGGLDNDELY 1528
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G+ G D + Y E+ D DF+
Sbjct: 1529 GNQGNDRIYGQEG---YDTLDGEDGHDFLDGG-LGDDFIYG 1565
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/236 (12%), Positives = 59/236 (25%), Gaps = 55/236 (23%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK-------------NMT 261
+ TI G D + ++L + G +
Sbjct: 856 GNSGNDTIDGGAGIDTISY-HYDPSAVTVNLAENQATDGYGSTDTFLNIENIIGSALDDQ 914
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + +GND + G + ++ + +G+D G +G D
Sbjct: 915 ITGDSQANHITAGAGNDSIKGGAGDDQLYGEAGDDFLMGEAGNDVLDGGDDIDTVSFTNS 974
Query: 322 ENAIIV---------------------------------------YDANEHKQDFLSDVE 342
N++++ D L ++E
Sbjct: 975 LNSVVINLDEINSYSNPGGSFHTTILSTTPIPTDIEPAFTINPGTASDGFGTTDILRNIE 1034
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + + Q + LE + LI G D+ + RD
Sbjct: 1035 NILASQDDDVIIGNAQNNHLEGLGGNDVLIGNSGNDILDGGAGLDTISYR--RDPN 1088
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 17/129 (13%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFENA 324
+ G GND + GN+ N+ G+D G G D + + + + N+
Sbjct: 1302 LYGHKGNDTLDGNAGNDYLEGGVGDDQLTGGEGNDQLYSQSGADTLSGGIGDDLLDGGNS 1361
Query: 325 IIVYDANEH--------KQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + D L + + L + + L + L
Sbjct: 1362 DDILSGGDGDDQLYGQNGNDTLNGNTGNDYLDGGNGNDQLTGEEGNDRLYGDNGNDTLNG 1421
Query: 374 VIGQDVFES 382
G D+ +
Sbjct: 1422 NAGNDLLDG 1430
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 47/139 (33%), Gaps = 4/139 (2%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
IG + + + ++I + + + + G G D + + N+
Sbjct: 1116 IGSNSSDRLIGDANANTIITGTGDDWVEARNGDDIIFGEEGQDTLFAENGNDFLVGGKDA 1175
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D +G G DT Y+ + + V DA D + +E L +D +
Sbjct: 1176 DSLNGGEGNDTASYFTAASRVAVSLTTGKGWVGDAKG---DRIEAIENLEGSDYEDLLIG 1232
Query: 356 VKQRSILEYTASYEDLIQV 374
+ L A +DLI
Sbjct: 1233 NSINNTLSGLAG-DDLIYA 1250
>gi|332187443|ref|ZP_08389181.1| calx-beta domain protein [Sphingomonas sp. S17]
gi|332012604|gb|EGI54671.1| calx-beta domain protein [Sphingomonas sp. S17]
Length = 1645
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + + G GNDV+ G +V +GNDV G G D A
Sbjct: 1475 TLYGLGGHDQLNGGFGDDRLFGGDGNDVLFGGLGRDVLDGGAGNDVLFGGLGNDILTGGA 1534
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ R + + + D + +D L + +R A + VN L + +
Sbjct: 1535 GADVFHFGRLDGSDTITDFDT-ARDALVLDDGIRLAHSRVQDVNRDGVKDLVLSFTQATS 1593
Query: 372 IQVIGQDVFESMK-----HFYEFGLSEGRDITFDS 401
+ ++G + +S+K H+ + R FD
Sbjct: 1594 VTLLGVNDVKSVKFSGPDHWSD------RQPGFDG 1622
>gi|257486706|ref|ZP_05640747.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 857
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++++G G+D + G++ ++ +G D G G DTF Y + Y
Sbjct: 810 DTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSTLTDSY 857
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N+T T E+ G+ G+D ++G ++ +G D+ +G +G D + +
Sbjct: 786 VGNVTPGVLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGA 845
Query: 314 YLYKIYRFENA 324
+ ++
Sbjct: 846 DTFVYSTLTDS 856
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GNDV+ GN+ + +G D+ +G + D A + L+ ++ Y
Sbjct: 541 DTLTGTDGNDVMNGNAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY 600
Query: 329 DANEHKQ-DFLSDV----ERLRFADQCIDSVNVKQRSILEYTASYED 370
+A+ KQ D ++D +R+ + + + + + Y + D
Sbjct: 601 NASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
>gi|253998563|ref|YP_003050626.1| hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
gi|253985242|gb|ACT50099.1| hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
Length = 772
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 58/177 (32%), Gaps = 13/177 (7%)
Query: 196 GAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-----L 245
GA + G+ + TI GDD +D + G D +
Sbjct: 510 GADNVTTGDGNNNITLGAGNDTVTSGAGNDTINAGTGDDSID-SGAGNDSIIGDAGNDTI 568
Query: 246 NTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N + + + G + +I +SV G G D + G S ++ GND G +G
Sbjct: 569 NAGAGNDKVLGGAGDDSILAGDGNDSVDGGVGADYIDGGSGSDTLLGGDGNDTILGGAGN 628
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
D L+ I + + V + +D+ + + + + +
Sbjct: 629 DQLTGGKGDDLFIIGDDGVGFDIITDFSTTSTKTAGVVTVT-SDRLLITGHFGEDDV 684
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 9/140 (6%)
Query: 196 GAPKGSLGNN---IYKIEVQQKD--SPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTE 248
G+ ++G+ IY +Y GDD + ++ V NYIDL
Sbjct: 187 GSNSITVGDGKNVIYGEAGADTVVIGGGANKLYLGAGDDNVSISTSQTVFGANYIDLGAG 246
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ Y TI ++V G + G + ++ G D G +G D F
Sbjct: 247 NDVYQSSYSGVATIIAGEGNDTVQSGDGKTFIDGGAGDDELSSGRGADKIYGGAGND--F 304
Query: 309 YYAPSYLYKIYRFENAIIVY 328
+ IY + ++
Sbjct: 305 ISSGYGSDTIYGGDGDDFIF 324
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 46/159 (28%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
++ ++ I L + I E TI +++ G G DV+ + N++ +
Sbjct: 81 SITADAQDNILLGNMFANKIMAGEGADTIFGGGGNDTLYGGEGADVITTTTGNSIIYGEV 140
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D + S G + + + N I D + + D
Sbjct: 141 GDDTLNVSVGNNILYGGLGNDTITAGNGNNTIFAGDNKTTSLTTDTGSNSITVGDGKNVI 200
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ L G D FG +
Sbjct: 201 YGEAGADTVVIGGGANKLYLGAGDDNVSISTSQTVFGAN 239
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 23/192 (11%)
Query: 188 IVAVQKIYGAP--KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
I Q ++GA GN++Y+ + TI G+D + G K +ID
Sbjct: 229 ISTSQTVFGANYIDLGAGNDVYQSSYSG-----VATIIAGEGNDTV---QSGDGKTFIDG 280
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS----------GN 295
+ I + + G+D + G ++ F
Sbjct: 281 GAGDD-ELSSGRGADKIYGGAGNDFISSGYGSDTIYGGDGDDFIFARGYETYLDVANNAK 339
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G SG DT S + ++Y + +D ++ +DS+
Sbjct: 340 VTVYGGSGSDTIRVGMRSQSGSSTSTVASAVIY--ADDAKDTVNFGNDTVTIGNNVDSIP 397
Query: 356 VKQRSILEYTAS 367
++ Y
Sbjct: 398 GGTYTVYTYRGD 409
Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 49/204 (24%), Gaps = 20/204 (9%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLL-----------DLTLIGGVKNYIDLNTESWSSIG 254
Y+ + +Y G+D + D I ++I
Sbjct: 405 TYRGDDVINGRSGNYKLYTGYGNDTVTVLHGNSVIVTDEAGDTLGGADIVTAGNGNNTIT 464
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES------SGNDVFDGSSGLDTFF 308
Y N I + G+D + + NN G D G +
Sbjct: 465 TYRGNDAITAGNGNNKIYAGYGDDTITVGAGNNTIVTDETKDKVGGADNVTTGDGNNNIT 524
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A + N I + D + + + + A
Sbjct: 525 LGAGNDTVTSGA-GNDTINAGTGDDSIDSGAGNDSIIGDAGNDTINAGAGNDKVLGGAGD 583
Query: 369 EDLIQVIGQDVFES--MKHFYEFG 390
+ ++ G D + + + G
Sbjct: 584 DSILAGDGNDSVDGGVGADYIDGG 607
>gi|126740151|ref|ZP_01755840.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126718606|gb|EBA15319.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 702
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 7/189 (3%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GS ++++ + I +GG D TL GG + S ++ G
Sbjct: 428 NGGSGNDSLFGGSGRDSLRGDIGNDSLTGG--TGDDTLYGGDGDDRLFGNTSLDTLYGGA 485
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N I+ ++ V G +GND + G S ++ + GND GS G DT
Sbjct: 486 GNDYISAGDGVDFVNGDAGNDTIHGRSGWDLLNGNDGNDSIYGSQGDDTLNGGGDDDWLS 545
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR--SILEYTASYEDLIQVI 375
+A V N+ + + + L + L
Sbjct: 546 ---GGSAWDVLFGNDGNDTLYGNFGSDVQSGGAGNDQLFGGTGDDSLRGGDGNDTLQGNQ 602
Query: 376 GQDVFESMK 384
G D +
Sbjct: 603 GVDRLDGGA 611
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 4/126 (3%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGY 256
++IY + + + SGG ++ G L S + G
Sbjct: 518 NGNDGNDSIYGSQGDDTLNGGGDDDWLSGGS---AWDVLFGNDGNDTLYGNFGSDVQSGG 574
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + T +S+ G GND + GN + +G+D+ G + DTF +
Sbjct: 575 AGNDQLFGGTGDDSLRGGDGNDTLQGNQGVDRLDGGAGDDLLRGGTLRDTFVFNTGYDND 634
Query: 317 KIYRFE 322
+I FE
Sbjct: 635 EINDFE 640
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 17/189 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVI 268
S ++ GG D + G L+ + + + G N ++ +
Sbjct: 388 SEALSGSANADYLFGLGGADTI-----AGEAGDDRLDGGAGADLLNGGSGNDSLFGGSGR 442
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G GND + G + ++ + G+D G++ LDT + A + Y + +
Sbjct: 443 DSLRGDIGNDSLTGGTGDDTLYGGDGDDRLFGNTSLDTLYGGAGND----YISAGDGVDF 498
Query: 329 DANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDL----IQVIGQDVFE 381
+ D + S + L D + L + L +
Sbjct: 499 VNGDAGNDTIHGRSGWDLLNGNDGNDSIYGSQGDDTLNGGGDDDWLSGGSAWDVLFGNDG 558
Query: 382 SMKHFYEFG 390
+ + FG
Sbjct: 559 NDTLYGNFG 567
>gi|73988268|ref|XP_852601.1| PREDICTED: similar to Matrix metalloproteinase-26 precursor
(MMP-26) (Matrilysin-2) (Endometase) [Canis familiaris]
Length = 285
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 69/190 (36%), Gaps = 51/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + + Y+ + + + + A+ WS V L F++ S +DIK
Sbjct: 99 WDKHTLTYRIINYPRDINPSTV-------KNIMQNAVSIWSNVTPLIFQQVKSQDADIKI 151
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
G+ P SR I+FD+ + W +G L A+H
Sbjct: 152 SFWDLAHGDCWPFDGPGGVLGHAFLPN--SRAPGVIHFDRGEHWSTSY-RGFNLFLVAIH 208
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL+H S N S+M Y P+ D +
Sbjct: 209 ELGHSLGLLHSKSLN-------------------SIM-Y--PRYVNRDPRTFHLDG---D 243
Query: 187 DIVAVQKIYG 196
DI +Q++YG
Sbjct: 244 DIKRIQQLYG 253
>gi|186680837|ref|YP_001864033.1| Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
gi|186463289|gb|ACC79090.1| Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
Length = 1241
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 74/194 (38%), Gaps = 15/194 (7%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDD------LLDLTLIGGVKNYIDLNTESWSSI------ 253
+ T + G D ++ T++ Y + N + + I
Sbjct: 1048 TFTAANWNTPQVITVTGVNDGIVDDNIAYKIITGTVVSNDSKYNNFNPANIADIDVVNIK 1107
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N I +++ G+S +D++ G ++N++ GND G G D A +
Sbjct: 1108 NGNQVNSIITGSAKADNLQGTSSDDLIFGFASNDIIVGGLGNDQIYGGLGSDNLTGGAGN 1167
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ + + E + D N +D ++ L ++ + +I++ T++ ++L
Sbjct: 1168 DIFVLAKGEGIDTIKDFN-LSEDLIALSGGLIYS--GLSLTQSGSNTIIKDTSNNQNLAI 1224
Query: 374 VIGQDVFESMKHFY 387
+ G ++
Sbjct: 1225 LTGIQASTLNASYF 1238
>gi|332304956|ref|YP_004432807.1| peptidase M10A and M12B matrixin and adamalysin [Glaciecola
agarilytica 4H-3-7+YE-5]
gi|332172285|gb|AEE21539.1| peptidase M10A and M12B matrixin and adamalysin [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 353
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 49 PNAQEVARWALGEWSKV-VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
N + R A EW + + L F E + S+ +F + +
Sbjct: 62 ENQLQAVRDAFKEWKALGIGLDFIEVARASEAEFRIGFTAGSSWSYVGRDCIDLVPNPQE 121
Query: 108 DVWRYGIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
+G T ALHEIGHALG H + V+ D Y N + +Y+
Sbjct: 122 QTMNFGWDLTTPYGRDTALHEIGHALGFPHEHQNHKAGIVWDEDAVYAN---FAAYPNYW 178
Query: 167 MPQDSMMD 174
+ +
Sbjct: 179 DQATTYHN 186
>gi|86147540|ref|ZP_01065851.1| hypothetical protein MED222_13485 [Vibrio sp. MED222]
gi|85834708|gb|EAQ52855.1| hypothetical protein MED222_13485 [Vibrio sp. MED222]
Length = 5040
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 12/150 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG--------GVKNYIDLNTESWS 251
+G ++ D+ + + D+ G L + + IDLN S
Sbjct: 4807 TDVGGGVWIATADAIDTVKVVGLSDTPGSYTLKVEAVSEELDNSDTATSASIDLNLNIVS 4866
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + ++ V ++ +GN + S N+ SG+D G G DT
Sbjct: 4867 N--GVDIDLATETDDV--QLLAGAGNIDLTAGSGNDRLEGGSGDDTLVGGDGNDTLTGGG 4922
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
S + ++ + ++ + +D ++D
Sbjct: 4923 GSDILTGGDGMDSFVWFNIEDGVEDTITDF 4952
>gi|331013590|gb|EGH93646.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 298
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 8/140 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 86 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 139
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G +G D + +
Sbjct: 140 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGGSGADTLIGGTG 197
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+ + ++NE D L D+
Sbjct: 198 ADRYVFNNSNETGLDGLRDI 217
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 9/154 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSAN 286
DD D + + SS+ Y +E+ V+ +G GN+ +
Sbjct: 38 DDAADRVVETNADQQVGGIDTVLSSLASYT------LGANLENIVITGTGAANATGNTLD 91
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N+ + +G++V DG G DT Y + + +A + D L E L
Sbjct: 92 NLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGGS--GLDTLKGTENLTG 149
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ K ++L + + L G DV
Sbjct: 150 SQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVL 183
Score = 41.3 bits (95), Expect = 0.60, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 9/142 (6%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN+ NV ++ N+V DG++G D S Y + + ++ +A++ + +
Sbjct: 1 GNALKNVITGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQ----VGGI 56
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ + + + ++ T + + ++ +GRD D+
Sbjct: 57 DTVLSSLASYTLGANLENIVITGTGAANATGNTLDNLIYAGAGDNVM----DGRDGN-DT 111
Query: 402 YLYLGSYDDLRNVFGSDRGAAA 423
YL + + + A
Sbjct: 112 VSYLFATAGVTVALNTSAQQAT 133
>gi|296534099|ref|ZP_06896605.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296265573|gb|EFH11692.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 1373
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +++ G SGND + G + ++ G+DV G G D A +
Sbjct: 345 GMGGDDRLIGGDGNDTLDGGSGNDFLEGGNGDDTLTGGDGDDVLSGGHGNDVLLGGAGND 404
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + + A + + D L D+E
Sbjct: 405 VLRGGPGNDIFRYLRAADLQGDILRDLE 432
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 53/200 (26%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG--------------------GVKNY 242
GN++++ EV+ + T+ D D LD + +G GV
Sbjct: 1105 GNDVFRWEVEDIAGAALDTVLDFTVGDTLDFSPLGARFLGSGAFTGRGEAEIRQAGVMLL 1164
Query: 243 IDLNTESWSS-----------------------------IGGYEKNMTIAQHTVIESVVG 273
+DLN + ++ + G E + +++ G
Sbjct: 1165 VDLNGDGFTDASVQLNALPGSLQETAPGSGLLVLASPQVLTGTEGRDLLTGGGNADTIHG 1224
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+DV+ G N++ +GND G G D + + + +
Sbjct: 1225 LGGDDVLAGGGGNDILHGGAGNDTLLGGEGDDILVGGPGADSLTGGPGNDRFVFAHGDTG 1284
Query: 334 ----KQDFLSDVERLRFADQ 349
+D ++D +ADQ
Sbjct: 1285 NDSAARDTITDFNAAPYADQ 1304
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 40/109 (36%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ D L G V + L ++ G + I +++ G GND ++G S
Sbjct: 480 TAAIDTGGRLLEGNVPGSLTLVVARDRALAGTLGDDVITGGPGHDTLTGRDGNDTLLGGS 539
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
N+ +GND+ DG +G D +++I D
Sbjct: 540 GNDTLLGGNGNDLLDGGNGDDVLEGGLGWDIFRISPETGGRYTTDTLRD 588
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 15/126 (11%)
Query: 225 SGGDDLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+GG+D L +GG I D N + G N + +++ G G+DV+ G
Sbjct: 337 NGGNDTL--LGMGGDDRLIGGDGNDT----LDGGSGNDFLEGGNGDDTLTGGDGDDVLSG 390
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+V +GNDV G G D F Y + L I+ D LS +
Sbjct: 391 GHGNDVLLGGAGNDVLRGGPGNDIFRYLRAADL-------QGDILRDLEPGDLLSLSAIG 443
Query: 343 RLRFAD 348
RF
Sbjct: 444 AFRFIG 449
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 58/154 (37%), Gaps = 10/154 (6%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ D+ A++ Y + ++ Q ++ D+ GD ++D + G ++
Sbjct: 972 LIDLAALRARYIGSDPFQADGTAQLRSWQLGVTWLA--VDANGDGVVDAVMSLGDAAPLE 1029
Query: 245 --------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
L + + G N T+ ++++G GND + G + N+ +G D
Sbjct: 1030 ETAPGSGLLRRVADLVLSGGAGNDTLTGGAGQDTLLGLGGNDTLSGGAGNDSLDGGAGQD 1089
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G G DT + +++ + A D
Sbjct: 1090 WLRGGPGSDTLIGGPGNDVFRWEVEDIAGAALDT 1123
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 33/91 (36%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ +VG +G+D ++G N+V G+D G G DT A + L +
Sbjct: 163 GGAGADRLVGGAGDDRLLGLGGNDVLLGGEGDDTLSGGDGNDTLEGGAGADLLLGGAGAD 222
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+A D D + L D +
Sbjct: 223 LFRYTEAAHLAGDRFGDFDDLDRIDLSGVAG 253
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + T+ ++++G SGND ++G + N++ +G+DV +G G D F
Sbjct: 517 ITGGPGHDTLTGRDGNDTLLGGSGNDTLLGGNGNDLLDGGNGDDVLEGGLGWDIFRISPE 576
Query: 313 SYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFAD 348
+ D + Q L + F+
Sbjct: 577 TGGRYTTDTLRDFTQADRIDLTQFRGLVWINDGLFSG 613
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + ++G GNDV++G ++ GND +G +G D A +
Sbjct: 162 SGGAGADRLVGGAGDDRLLGLGGNDVLLGGEGDDTLSGGDGNDTLEGGAGADLLLGGAGA 221
Query: 314 YLYKIYRFE--NAIIVYDANEHKQDFLSDVERLRF 346
L++ D ++ + LS V LRF
Sbjct: 222 DLFRYTEAAHLAGDRFGDFDDLDRIDLSGVAGLRF 256
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 3/112 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-- 310
+ G + I +++ G G D++ G ++V G D G +G D F Y
Sbjct: 13 LTGTPGDDIIQGLGGNDTLSGGDGADILSGGDGDDVLTGGRGADTLHGGAGNDVFRYGSL 72
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
A +I F + + F+ + A ++L
Sbjct: 73 AELSEDRIVDFSTGDRLDFSAIAGLRFI-GAQNFTGAGMEARLAWQGATTLL 123
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 39/101 (38%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ G I + +E ++ G N T+ ++++G GNDV+ G + ++
Sbjct: 667 VSFSGNDLANILVGSEGDDTLSGLGGNDTLVGWAGHDTLIGGPGNDVLRGETGDDTLLGG 726
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+DV G D + ++ ++ D
Sbjct: 727 EGDDVLLPGLGRDVMTGGPGADWFRYRSVAEIGLLEDRITD 767
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 6/116 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG + D + GN N+ G+D G G DT + + + ++ +
Sbjct: 323 DRLVGDASADRLEGNGGNDTLLGMGGDDRLIGGDGNDTLDGGSGNDFLEGGNGDDTLT-- 380
Query: 329 DANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D LS + D + + + DL I +D+
Sbjct: 381 --GGDGDDVLSGGHGNDVLLGGAGNDVLRGGPGNDIFRYLRAADLQGDILRDLEPG 434
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 29/101 (28%), Gaps = 4/101 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G +G D ++G + ++ GNDV G G DT + + A
Sbjct: 161 ASGGAGADRLVGGAGDDRLLGLGGNDVLLGGEGDDTLSGGDGNDTLE----GGAGADLLL 216
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D E A + R L A L
Sbjct: 217 GGAGADLFRYTEAAHLAGDRFGDFDDLDRIDLSGVAGLRFL 257
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 23/56 (41%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++G+ G +++ G +++ GND G G D + R + +
Sbjct: 3 NIIGNGGANLLTGTPGDDIIQGLGGNDTLSGGDGADILSGGDGDDVLTGGRGADTL 58
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 34/124 (27%), Gaps = 27/124 (21%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIG---------------------------NS 284
++ G N + + +VG G+D + G +
Sbjct: 851 NLTGGPGNDVLTGGGGQDRLVGGGGDDRLSGLGGPDQLYGGTGNDTLDGGDGDDLLLGEA 910
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ +G D G G D + + A E + D ++D +
Sbjct: 911 GDDTLIGGAGRDTLRGGDGNDLLAGGLGADTLTGGAGNDIFRYLAAAELEGDRITDFQAG 970
Query: 345 RFAD 348
D
Sbjct: 971 DLID 974
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+IGN N+ + G+D+ G G DT I + V D L
Sbjct: 4 IIGNGGANLLTGTPGDDIIQGLGGNDTLSGG---DGADILSGGDGDDVLTGGRGA-DTLH 59
Query: 340 D 340
Sbjct: 60 G 60
>gi|291566971|dbj|BAI89243.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 498
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N TI +++ G ND++ + NN+ F + GND G G D+ + A
Sbjct: 63 IYGNQGNDTIIGGDGSDTIFGGQDNDLLEAGNGNNILFGNLGNDTLIGGPGNDSLYGGAG 122
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + I N+II + + D L+
Sbjct: 123 NDVI-IGGPGNSII---SGDKGLDTLTG 146
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 19/183 (10%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ + IY + G+D + IGG + +I G + N + + G+
Sbjct: 56 NDNNAKIIYGNQGNDTI----IGGDGSD---------TIFGGQDNDLLEAGNGNNILFGN 102
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND +IG N+ + +GNDV G G N I+ + +
Sbjct: 103 LGNDTLIGGPGNDSLYGGAGNDVIIGGPGNSIISGDKGLDTLTGGNGANQFILQSSGADR 162
Query: 335 ---QDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM--KHFYE 388
DF S ++++R + + V+ +++ ++ + S+ F
Sbjct: 163 DVITDFKSGIDKMRLPTGLTFNDLEVRGAGANTEIVRNGEVVAILNDVMSSSINSNDFIT 222
Query: 389 FGL 391
G
Sbjct: 223 AGQ 225
Score = 44.0 bits (102), Expect = 0.095, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 3/153 (1%)
Query: 231 LDLTLIGGVKNYI---DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
LDL + NYI L + IA + +V + ++ GN N+
Sbjct: 11 LDLGIATPGNNYIIVSQLPPGQIAHFSASPFQNAIALLEGDDYLVNDNNAKIIYGNQGND 70
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G+D G D + + + +I N+ + +
Sbjct: 71 TIIGGDGSDTIFGGQDNDLLEAGNGNNILFGNLGNDTLIGGPGNDSLYGGAGNDVIIGGP 130
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I S + ++ + + ++Q G D
Sbjct: 131 GNSIISGDKGLDTLTGGNGANQFILQSSGADRD 163
>gi|186896653|ref|YP_001873765.1| pore forming RTX toxin family protein [Yersinia pseudotuberculosis
PB1/+]
gi|186699679|gb|ACC90308.1| pore forming RTX toxin family protein [Yersinia pseudotuberculosis
PB1/+]
Length = 3110
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSI 253
G + G N + + + G D + L + G + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAAASKSHILSGGEGYDTVALGEVLGNEIDSIIDISKGYYSQV 2232
Query: 254 -GGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYL 315
Sbjct: 2291 GLAQ 2294
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 62/196 (31%), Gaps = 32/196 (16%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA----N 286
L +T G Y D T ++ ++ V SSGND V+ NSA
Sbjct: 2594 LKITDKSGQSQYRDPVTGTFIDYQINLDQNAHPFIAAQQAPVVSSGNDEVVINSATFLPG 2653
Query: 287 NVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
N GND + G G DT++Y A S I A+
Sbjct: 2654 NYIDTGDGNDAIIYIRGHEGTMLKGGDGDDTYYYSAGSGAINI-----------ADTSGL 2702
Query: 336 DFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L D L N +I + T+ + D + EF E
Sbjct: 2703 DHLYLDKHILLHTLSAERRENNLVLNIADNTSGRIIFVDWYLADENK-----VEFIWVED 2757
Query: 395 RDITFDSYLYLGSYDD 410
ITFD L Y D
Sbjct: 2758 SQITFDELFSLRPYSD 2773
>gi|1000037|pdb|1CGL|A Chain A, Structure Of The Catalytic Domain Of Fibroblast
Collagenase Complexed With An Inhibitor
gi|1000038|pdb|1CGL|B Chain B, Structure Of The Catalytic Domain Of Fibroblast
Collagenase Complexed With An Inhibitor
Length = 169
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 58/194 (29%), Gaps = 49/194 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W +RY+ + T D+ A WS V LTF + S +DI
Sbjct: 8 RWEQTHLRYRIENYTPDLPRADV-------DHAIEKAFQLWSDVTPLTFTKVSEGQADIM 60
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A HE
Sbjct: 61 ISFVRGDHRDNSPFDGPGGNLAHAFDPGPGIGGDAHFDEDERWTNNF-REYNLHRVAAHE 119
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M +F D
Sbjct: 120 LGHSLGLSHSTDIGA-------------------LM--------YPSYTFSGDVQLAQDD 152
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG +
Sbjct: 153 IDGIQAIYGRSQNP 166
>gi|302875207|ref|YP_003843840.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578064|gb|ADL52076.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 565
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 23/191 (12%)
Query: 221 TIYDSGGDDLLDLTLI--GGVKNYIDLNTESWSSIGGYEKNMT---------IAQHTVIE 269
T++D + + +L+ G LN E + GYE + T I T +
Sbjct: 304 TVWD---INTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGND 360
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V G+ GND++ G ++ + +G+D+ DG G D + + L +
Sbjct: 361 QVYGNGGNDLLYGEDGDDKLYGGNGDDILDGGEGKDYLYGENGNDLLDGKNGGGYLEGGA 420
Query: 330 ANE-------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N+ QD + + L D S+N S + S DLI + +
Sbjct: 421 GNDTYIFSKGDGQDIIYNSSSLD-TDNDKLSLNDVNLSETAFIKSNTDLIIKLNETTDSV 479
Query: 383 MKH-FYEFGLS 392
++ +G
Sbjct: 480 TILGYFNYGKY 490
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 221 TIYDSGGDDLLDLTLI--GGVKNYIDLNTESWSSIGGYEKNMT---------IAQHTVIE 269
T++D + + +L+ G LN E + GYE + T I T +
Sbjct: 106 TVWD---INTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGND 162
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
V G+ GND++ G ++ + +G+D+ DG G D + + L
Sbjct: 163 QVYGNGGNDLLYGEDGDDKLYGGNGDDILDGGEGKDYLYGENGNDLLD 210
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I + I + ++ + TV + + G ++ G ++ +GND G
Sbjct: 99 KIQFADGTVWDINTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGG 158
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+G D + + L ++ + + D L E
Sbjct: 159 TGNDQVYGNGGNDLLYGEDGDDKLY----GGNGDDILDGGE 195
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I + I + ++ + TV + + G ++ G ++ +GND G
Sbjct: 297 KIQFADGTVWDINTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGG 356
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+G D + + L ++ + + D L E
Sbjct: 357 TGNDQVYGNGGNDLLYGEDGDDKLY----GGNGDDILDGGE 393
>gi|73962351|ref|XP_848757.1| PREDICTED: similar to matrix metalloproteinase 14 preproprotein
isoform 1 [Canis familiaris]
Length = 585
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 141 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 200
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 260
Query: 149 VDNDYEN 155
D EN
Sbjct: 261 QWMDTEN 267
>gi|84517235|ref|ZP_01004590.1| S-layer protein RsaA [Loktanella vestfoldensis SKA53]
gi|84508910|gb|EAQ05372.1| S-layer protein RsaA [Loktanella vestfoldensis SKA53]
Length = 633
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 23/192 (11%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LD + G L+ +++ + I + +++ GS DV+IG + N+
Sbjct: 443 TLDASGSTGTNT---LSAATFA-----TNGVAITGGSGADTITGSGQADVIIGGAGNDTI 494
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF--A 347
G D G +G DTF + A II DF++ ++L+F
Sbjct: 495 TGGDGTDTVTGGAGADTFAFAAGDNAGADGAAVADII--------TDFVAGTDKLQFGNT 546
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D + Q ++ A D + F + G ++Y+Y+ +
Sbjct: 547 DIVSAQQSAVQAAVTALAAGSTDAQIATAMVAANTTVEGVSFAVFNG-----NTYVYVET 601
Query: 408 YDDLRNVFGSDR 419
D ++
Sbjct: 602 TADALTHVEANG 613
>gi|160877869|pdb|2Z2D|A Chain A, Solution Structure Of Human Macrophage Elastase (Mmp-12)
Catalytic Domain Complexed With A Gamma-Keto Butanoic
Acid Inhibitor
Length = 164
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 58/189 (30%), Gaps = 49/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 10 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 62
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 63 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 121
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 122 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 155
Query: 188 IVAVQKIYG 196
I +Q +YG
Sbjct: 156 IRGIQSLYG 164
>gi|2424977|dbj|BAA22225.1| SMCP-2 [Homo sapiens]
Length = 507
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 53/171 (30%), Gaps = 49/171 (28%)
Query: 54 VARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCTP 92
R A W + L F+E H D G++
Sbjct: 1 AVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHA 60
Query: 93 RYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + +FD + W + G L A+HE+GHALGL H + N
Sbjct: 61 YFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNA------- 113
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+M+ F + + D+ +Q++YG P G
Sbjct: 114 ------------IMAPFYQWKDVDNFK------LPEDDLRGIQQLYGTPDG 146
>gi|229508435|ref|ZP_04397938.1| hypothetical protein VCF_000001 [Vibrio cholerae BX 330286]
gi|229354389|gb|EEO19312.1| hypothetical protein VCF_000001 [Vibrio cholerae BX 330286]
Length = 1857
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 1554 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 1608
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 1609 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 1668
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 1669 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 1728
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 1729 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 1781
>gi|126737952|ref|ZP_01753682.1| hypothetical protein RSK20926_19962 [Roseobacter sp. SK209-2-6]
gi|126721345|gb|EBA18049.1| hypothetical protein RSK20926_19962 [Roseobacter sp. SK209-2-6]
Length = 877
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 20/166 (12%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ G+D L + + G N ++ + ++ + G G+D +
Sbjct: 566 LFGGAGNDTLSGSAGHDT-------------LEGGTGNDELSGGSGLDVLSGGVGDDTLS 612
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G S ++ + + GND+ G SG D + + + + + DFL
Sbjct: 613 GGSEGDILYGNDGNDLLRGGSGQDQLLGGSGTD----ELNGGSGDDALSGDSGTDFLEGG 668
Query: 342 ERLRFADQCIDS---VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D +D + L + + G D
Sbjct: 669 SGHDTLDGGVDDDTVIGGSGDDSLTGGYGNDSISAGSGNDTASGGA 714
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 12/175 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D LD GGV + + S+ G N +I+ + ++ G +G D V+G +
Sbjct: 668 GSGHDTLD----GGVDDDTVIGGSGDDSLTGGYGNDSISAGSGNDTASGGAGADKVLGGA 723
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIYRFENAIIVYDANEHKQD 336
N+ GND +G SG D + + N I A
Sbjct: 724 GNDQLSGGLGNDRLNGGSGADLLAGGDGNDHLNGGLGHDLLLGGAGNDRIYLGAGNDSAT 783
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D +R F + +D D + + S ++
Sbjct: 784 GGGDADRFIFRTEDLDGSTDLITDFSTLEGDILDFRSLDLMEDGMSFSEWFNGAA 838
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 12/188 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +Y + G+DLL GG L + G + ++ + +
Sbjct: 608 DDTLSGGSEGDILYGNDGNDLL----RGGSGQDQLLGGSGTDELNGGSGDDALSGDSGTD 663
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G SG+D + G ++ SG+D G G D+ + + + ++
Sbjct: 664 FLEGGSGHDTLDGGVDDDTVIGGSGDDSLTGGYGNDSISAGSGNDTASGGAGADKVLGGA 723
Query: 330 ANEHKQDFL--------SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N+ L S + L D +L A + + G D
Sbjct: 724 GNDQLSGGLGNDRLNGGSGADLLAGGDGNDHLNGGLGHDLLLGGAGNDRIYLGAGNDSAT 783
Query: 382 SMKHFYEF 389
F
Sbjct: 784 GGGDADRF 791
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 2/128 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++VG +G D + G ++ S D G +G D A
Sbjct: 490 DTLVGEAGADTLDGGLGADLAIGGSLGDHLRGGTGDDDLHGGAAPSDRSSEVISFYDESG 549
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDVFE-SMKHF 386
+ + L++ + F D+++ LE ++L G DV +
Sbjct: 550 LRYDQFGNLLAEDDDFLFGGAGNDTLSGSAGHDTLEGGTGNDELSGGSGLDVLSGGVGDD 609
Query: 387 YEFGLSEG 394
G SEG
Sbjct: 610 TLSGGSEG 617
>gi|262371395|ref|ZP_06064713.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262313732|gb|EEY94781.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 1327
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 5/139 (3%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA S G Y + + IY G TL G ++ I L + ++ G
Sbjct: 1120 GAIGPSSGGFDYTLNELGVLTNAKADIYHVAGT-----TLNGTERDDILLGGATNDTLYG 1174
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N + + +++ G +GND + G N++ + +GND+ G G D +
Sbjct: 1175 GKGNDVLIGGSGQDTLYGGNGNDRLEGGIGNDILYGDAGNDILIGGVGNDILNGGLGADT 1234
Query: 316 YKIYRFENAIIVYDANEHK 334
+ +N N+
Sbjct: 1235 FVWGATDNVNQTDTINDFS 1253
>gi|227081773|ref|YP_002810324.1| RTX toxin [Vibrio cholerae M66-2]
gi|227009661|gb|ACP05873.1| RTX toxin [Vibrio cholerae M66-2]
Length = 2593
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 2290 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 2344
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 2345 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 2404
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 2405 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 2464
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 2465 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 2517
>gi|119483461|ref|ZP_01618875.1| hypothetical protein L8106_05391 [Lyngbya sp. PCC 8106]
gi|119458228|gb|EAW39350.1| hypothetical protein L8106_05391 [Lyngbya sp. PCC 8106]
Length = 1299
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 57/171 (33%), Gaps = 13/171 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G DL + + V + I L I G + N ++ T + + G SG+DV +G N
Sbjct: 855 GGDLGEAIIGTDVDDTI-LGGGGRDVIRGLDGNDSLDGGTGNDVIDGGSGDDVQLGQEGN 913
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ SGND+ DG +G++T N +++ + D + L
Sbjct: 914 DSLVGGSGNDLLDGGAGINTLQG----------NDGNDVLIGGNESNILDGGKGNDNLSS 963
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
V + A + L G GRD
Sbjct: 964 GLGSDSLVGGIGDDTVNGNAGDDTLRGDQEDPTLPGGNDLVLGGA--GRDF 1012
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 9/143 (6%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
++ G+D + G ++ I N + S + G N TI T ++ +G GND
Sbjct: 391 DVVWGDEGNDSV---YGGSGEDLIFGNDGADS-LLGDNGNDTIFAGTGSDTALGGEGNDQ 446
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G ++ F G D G +G DTF + I E A IV D DF+
Sbjct: 447 ISGELGSDFLFGGEGADTLAGGTGSDTFAIAEGTGGQSI---EEANIVQDFQPD--DFIG 501
Query: 340 DVERLRFADQCIDSVNVKQRSIL 362
L F+D I + +
Sbjct: 502 LAGGLNFSDLDISQSSENAGDTI 524
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 12/174 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + F+ + D G L L LNT + G + I
Sbjct: 809 FDGDGPAGEDGFLFAVTD--GIGTLPQALFSIALVDRTLNTIPGKATTGGDLGEAIIGTD 866
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V ++++G G DV+ G N+ +GNDV DG SG D ++ + N +
Sbjct: 867 VDDTILGGGGRDVIRGLDGNDSLDGGTGNDVIDGGSGDDV----------QLGQEGNDSL 916
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V + D + + L+ D + + +IL+ ++L +G D
Sbjct: 917 VGGSGNDLLDGGAGINTLQGNDGNDVLIGGNESNILDGGKGNDNLSSGLGSDSL 970
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 225 SGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
SGG+D + + ++ G N + + SI G + + I + + G +GND
Sbjct: 1059 SGGNDTITGGVGNDSIFGEKGNDSLIGEQGQDSIFGGDNDDVIFGREDNDLMFGDAGNDT 1118
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++ +G D+ +G D F+Y P I
Sbjct: 1119 IRAGIGDDTLAGGAGGDLLISDAGNDVFYYLNPGEGVDI 1157
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 9/138 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E N +I + + GS G D + GN+ N+ +GND G D
Sbjct: 285 IDGLEGNDSIFGLAGNDQIQGSEGIDFLFGNTDNDTLEGGTGNDQIYGGKQSDRLVGDDG 344
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYT 365
E+ ++ + D L + L D+ D V + + Y
Sbjct: 345 DDGLFGNLGEDTLLGGQGRDVMYGGQANDSLRGGLDDDLVLGDKDNDVVWGDEGNDSVYG 404
Query: 366 ASYEDLIQVIGQDVFESM 383
S EDLI G D +S+
Sbjct: 405 GSGEDLI--FGNDGADSL 420
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 37/133 (27%), Gaps = 6/133 (4%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------A 311
N + + + G G+D ++G ++V + G+D G G D +
Sbjct: 1000 GNDLVLGGAGRDFMRGGEGDDTILGQDNSDVIYGDRGSDSISGDQGDDILVGDTGISSLS 1059
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N I + + + D + ++ A + +
Sbjct: 1060 GGNDTITGGVGNDSIFGEKGNDSLIGEQGQDSIFGGDNDDVIFGREDNDLMFGDAGNDTI 1119
Query: 372 IQVIGQDVFESMK 384
IG D
Sbjct: 1120 RAGIGDDTLAGGA 1132
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 15/136 (11%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGL 304
G ++ +I + + + G GND + G + N+ S G ND +G +G
Sbjct: 268 KGTVEDDSITGSSGEDVIDGLEGNDSIFGLAGNDQIQGSEGIDFLFGNTDNDTLEGGTGN 327
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSIL 362
D + S ++ + +D L + + + Q DS+ L
Sbjct: 328 DQIYGGKQSDRLVGDDGDDGL----FGNLGEDTLLGGQGRDVMYGGQANDSLRGGLDDDL 383
Query: 363 EYTASYEDLIQVIGQD 378
D++ +
Sbjct: 384 VLGDKDNDVVWGDEGN 399
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 58/176 (32%), Gaps = 13/176 (7%)
Query: 220 QTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+I S G+D++D ++ G N +E + G N T+ T + + G
Sbjct: 274 DSITGSSGEDVIDGLEGNDSIFGLAGNDQIQGSEGIDFLFGNTDNDTLEGGTGNDQIYGG 333
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--------IYRFENAII 326
+D ++G+ ++ F + G D G G D + + + + +N ++
Sbjct: 334 KQSDRLVGDDGDDGLFGNLGEDTLLGGQGRDVMYGGQANDSLRGGLDDDLVLGDKDNDVV 393
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D S + + D + + + + G D
Sbjct: 394 WGDEGNDSVYGGSGEDLIFGNDGADSLLGDNGNDTIFAGTGSDTALGGEGNDQISG 449
>gi|113474267|ref|YP_720328.1| cadherin [Trichodesmium erythraeum IMS101]
gi|110165315|gb|ABG49855.1| Cadherin [Trichodesmium erythraeum IMS101]
Length = 938
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 97/281 (34%), Gaps = 36/281 (12%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-GHAL 132
S +DI ++ + D D + Y + G + N I G L
Sbjct: 625 SPPTDIALSNNTIDENVAANTPIGNLSSTDPDTGDTFTYSLVSGAGDTDNGTFNISGDEL 684
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ Y P Y + + + + +Y ++ F + +DI+
Sbjct: 685 TIKSSPDYEN-KPSYSIRVETTDAAGE----TYQKELTINVNDLFDGNSG---NDIL--- 733
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTE 248
+ ++IY +E + K +Y GG+D++ D ++ G LN +
Sbjct: 734 -----RGTAAADSIYGLEGRDK-------LYGKGGNDIISGGADSDIVKGDSGDDQLNGD 781
Query: 249 SWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N I+ + V G SG+D + G++ + + +GND+ G G D
Sbjct: 782 DGRDRLYGGTGNDIISGGEDKDIVKGDSGDDQLNGDAGPDRLYGGTGNDILLGGDGNDLL 841
Query: 308 FYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDV 341
+ + ++Y + ++D + +
Sbjct: 842 YGQGGDDELNGGPGMDRLYGSDGIDTFVLGEGQERDSIYNF 882
>gi|319781735|ref|YP_004141211.1| outer membrane adhesin like proteiin [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167623|gb|ADV11161.1| outer membrane adhesin like proteiin [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 2079
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 31/160 (19%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSIGGYEKNMT---IA 263
+ S I TI G D+ D T G I+L + + G N + I
Sbjct: 1850 TVNDVIAGSTHIDTISGGAGTDIADYT--GSAAVSINLTDAGGAAGVHGTPSNPSDGNIT 1907
Query: 264 QH-------TVIESVVGSSGNDVVIGNSANN------------------VFFESSGNDVF 298
T IE ++G SG+D + GNS N +GND+
Sbjct: 1908 GGDALGDTLTGIEGLIGGSGDDYLYGNSGANYLAGGLGNDTLRGEGGADTLIGGAGNDLL 1967
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
G +G DT + +++ + ++ D N D +
Sbjct: 1968 VGGAGSDTLTGGTGADTFRLENLDIKDLITDFNGGDGDKI 2007
>gi|149203010|ref|ZP_01879981.1| hypothetical protein RTM1035_19746 [Roseovarius sp. TM1035]
gi|149143556|gb|EDM31592.1| hypothetical protein RTM1035_19746 [Roseovarius sp. TM1035]
Length = 636
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 12/93 (12%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
R FD+ Y Y D+ + A HY GV R+P F A Y+A++ D+
Sbjct: 15 RSAWFDAGWYGRVYPDVARL----PLDPATHYAWIGVFLARDPGPQFAARAYLAANPDVA 70
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
A D HF G EGR +
Sbjct: 71 AAGLDP-------FTHFLTTGQAEGRKAHPGAG 96
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGA 421
Y Y D+ ++ + H+ G+ RD F + YL + D+ G D
Sbjct: 24 YGRVYPDVARL----PLDPATHYAWIGVFLARDPGPQFAARAYLAANPDVAAA-GLD--- 75
Query: 422 AARHYITHGVKEGRNPDA 439
H++T G EGR
Sbjct: 76 PFTHFLTTGQAEGRKAHP 93
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 30/91 (32%), Gaps = 13/91 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F A Y + D+ D H++ G R F + YL +
Sbjct: 14 RRSAWFDAGWYGRVYPDVARLPLDPAT-------HYAWIGVFLARDPGPQFAARAYLAAN 66
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
D+ G D H++T G EGR
Sbjct: 67 PDVAAA-GLD---PFTHFLTTGQAEGRKAHP 93
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
R FD+ Y Y D+ + A HY GV R+P F A Y+A++ D+
Sbjct: 15 RSAWFDAGWYGRVYPDVARL----PLDPATHYAWIGVFLARDPGPQFAARAYLAANPDVA 70
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSI 565
A D HF G EGR
Sbjct: 71 AAGLDP-------FTHFLTTGQAEGRKA 91
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 13/91 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F A Y + D+ D H++ G R F YL +
Sbjct: 14 RRSAWFDAGWYGRVYPDVARLPLDP-------ATHYAWIGVFLARDPGPQFAARAYLAAN 66
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
D+ H++T G EGR
Sbjct: 67 PDVAAA----GLDPFTHFLTTGQAEGRKAHP 93
>gi|56696278|ref|YP_166635.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
gi|56678015|gb|AAV94681.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
Length = 707
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 37/109 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ + + G G+D + G + +++ G+D +G +G D +
Sbjct: 576 LDGGRGDDQLSGGAGSDQLSGGRGDDTLEGGAGHDLLKGGRGDDRLEGGAGHDMLIGGSG 635
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
++ V D + FA+ I + +
Sbjct: 636 DDVFVFAATAGHDHVLDFQAGADRLDLSGAGVSFAELTITAPTDGFAHV 684
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 38/142 (26%), Gaps = 12/142 (8%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + + + G G+D + G + ++ G+D +G +G D
Sbjct: 489 RDGDDALEGGDGHDVLDGGRGDDQLSGGAGSDQLNGGRGDDTLEGGAGHDLLDGGRGDDQ 548
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
A + D L D L A + L
Sbjct: 549 LS----GGAGSDQLSGGRGDDTLEGGAGHDLLDGGRGDDQ------LSGGAGSDQLSGGR 598
Query: 376 GQDVFESMK--HFYEFGLSEGR 395
G D E + G + R
Sbjct: 599 GDDTLEGGAGHDLLKGGRGDDR 620
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 17/170 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
Q T+ G DLLD G + L+ + S + G + T+
Sbjct: 519 SDQLNGGRGDDTLEGGAGHDLLD-----GGRGDDQLSGGAGSDQLSGGRGDDTLEGGAGH 573
Query: 269 ESVVGSSGNDVVIGNSA---------NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G G+D + G + ++ +G+D+ G G D A +
Sbjct: 574 DLLDGGRGDDQLSGGAGSDQLSGGRGDDTLEGGAGHDLLKGGRGDDRLEGGAGHDMLIGG 633
Query: 320 RFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
++ + ++H DF + +RL + + + + + A
Sbjct: 634 SGDDVFVFAATAGHDHVLDFQAGADRLDLSGAGVSFAELTITAPTDGFAH 683
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 10/125 (8%)
Query: 269 ESVVGSSGNDVV---------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G+ G+D + G ++ G+DV DG G D A S
Sbjct: 466 DGLFGAYGDDRISGGGGNDRLGGRDGDDALEGGDGHDVLDGGRGDDQLSGGAGSDQLNGG 525
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
R + + A D ++L + LE A ++ L G D
Sbjct: 526 R-GDDTLEGGAGHDLLDGGRGDDQLSGGAGSDQLSGGRGDDTLEGGAGHDLLDGGRGDDQ 584
Query: 380 FESMK 384
Sbjct: 585 LSGGA 589
>gi|326674248|ref|XP_002664668.2| PREDICTED: matrix metalloproteinase-20-like [Danio rerio]
Length = 422
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 54/160 (33%), Gaps = 44/160 (27%)
Query: 57 WALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFM-------------EI 102
AL WS L F + +DI F ++ + +D + ++
Sbjct: 121 LALKIWSDAAPLKFVQIKEGRADITFSFNSKAHGDFFPFDGPGGVLAHAFEPGEGLGGDV 180
Query: 103 NFDKADVWRYGIGK-GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
+FD ++W G G+ G L A HE+GH+LGL H
Sbjct: 181 HFDDDEIWTVGRGRPGYNLFTVAAHELGHSLGLSHSKDPTA------------------- 221
Query: 162 VMSYFMPQDSMMDASFGYCATPMV--SDIVAVQKIYGAPK 199
+M F AT + D + +Q +YG
Sbjct: 222 LM--------YPKYKFINAATYKLPRDDTLGIQALYGKKT 253
>gi|88813038|ref|ZP_01128280.1| hypothetical protein NB231_10984 [Nitrococcus mobilis Nb-231]
gi|88789671|gb|EAR20796.1| hypothetical protein NB231_10984 [Nitrococcus mobilis Nb-231]
Length = 426
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 67/210 (31%), Gaps = 25/210 (11%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
I A + GA + + N ++ + + +G T IG +DL
Sbjct: 176 INAQNNLTGAVETTTTNPAGGYALELASGDYTVSFSANGFATTSFQTSIGNQNVKLDLVD 235
Query: 248 ESWSSIGGYEKNM----------------TIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ S TI E++ G+SG+D + G + F
Sbjct: 236 PTTSGDTPISTPQPTPEPTPESTPEPQLNTITGTLTSETLHGTSGDDEIFGLGGRDRLFG 295
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---------E 342
++GND +G +G D + A + + + + + +D ++D E
Sbjct: 296 NAGNDHIEGGNGNDLLWGGAGADILTGGSGRDLFVFDAPFANAEDEITDFSPIDDFILLE 355
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLI 372
F+ ++ I D +
Sbjct: 356 NSIFSGLQTGRLSNSAFHIGTEAHDSTDQV 385
>gi|291568896|dbj|BAI91168.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 223
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E N T+ +++V + +D+++GN +++ F +GND G G DT
Sbjct: 58 LNGVEGNNTLFGGRGNDTLVAGNADDILLGNKDDDLLFGGNGNDSLYGGQGNDTLIAGDG 117
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ I + + D L E + + + SI+ +D+I
Sbjct: 118 ND---ILFGDKGNDILYGGAKGTDTLVGGE----GNDTFVMLPGEGYSIVSDFDINQDII 170
Query: 373 QVIGQDVFESMK 384
+IG ++
Sbjct: 171 VLIGNPDDYRLE 182
>gi|119909119|ref|XP_590696.3| PREDICTED: matrix metalloproteinase 17 [Bos taurus]
gi|297484686|ref|XP_002694502.1| PREDICTED: MMP17 protein-like [Bos taurus]
gi|296478663|gb|DAA20778.1| MMP17 protein-like [Bos taurus]
Length = 591
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 30/135 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEETSIHS- 77
W+ + ++ +P ++ R +AL WS + L F E + +
Sbjct: 128 WNKRNLSWRVRTFPRD---------SPLGRDTVRALMHYALKVWSDITPLNFHEVAGSAA 178
Query: 78 DIKFISSNNGYVCTPRYDSRYF--------------MEINFDKADVWRY--GIGKGTILS 121
DI+ S + +D + +FD + W + G L
Sbjct: 179 DIQIDFSTADHNDRYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSSDAHGMDLF 238
Query: 122 HNALHEIGHALGLMH 136
A+HE GHA+GL H
Sbjct: 239 AVAVHEFGHAIGLSH 253
>gi|47607148|gb|AAT36485.1| cable pili-associated 22 kDa adhesin protein [Burkholderia cepacia]
Length = 2888
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 56/140 (40%), Gaps = 5/140 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L+ +L+G ++ + S S + G N + + + + G GND++ G + N+
Sbjct: 2683 LNASLLGSTQSASIIEGTSGSDTVTGTSGNDRLYGYGGDDVLNGGDGNDLLRGGAGNDTL 2742
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+GND+ G +G DT A + ++ + + D ++D +
Sbjct: 2743 NGGNGNDILIGGTGNDTLTGGAGTDVFLWEVVGAD----NTGGNGHDVITDFQLASGPTD 2798
Query: 350 CIDSVNVKQRSILEYTASYE 369
+ ++ YTA +
Sbjct: 2799 TSGDKIDLSKLLVGYTADAD 2818
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 58/165 (35%), Gaps = 9/165 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT-VIESVVGSSGNDVVIGNSAN 286
D L+ ++ +S+ G ++ +I + T ++V G+SGND + G +
Sbjct: 2668 TDKTGLSASATAGQLLN------ASLLGSTQSASIIEGTSGSDTVTGTSGNDRLYGYGGD 2721
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V GND+ G +G DT + + + + + + +
Sbjct: 2722 DVLNGGDGNDLLRGGAGNDTLNGGNGNDILIGGTGNDTLTGGAGTDVFLWEVVGADNTGG 2781
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIG--QDVFESMKHFYEF 389
+ + + + DL +++ + H+ +
Sbjct: 2782 NGHDVITDFQLASGPTDTSGDKIDLSKLLVGYTADADGPAHYVDG 2826
>gi|323482766|gb|ADX86814.1| matrix metalloproteinase 3 [Mauremys mutica]
gi|331686391|gb|AED87074.1| matrix metalloproteinase 3 [Mauremys mutica]
Length = 481
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 64/194 (32%), Gaps = 47/194 (24%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK 80
W+ ++Y+ T D+ E A WS V L F ++DI
Sbjct: 112 RWTKTDLKYRILNYTPDMEPADV-------DEAIEKAWNVWSSVTPLKFTRVYEGNADIM 164
Query: 81 -----------FISSNNGYVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHE 127
F G Y + + +FD+ + W + KG L A HE
Sbjct: 165 ISFAAGFHGDFFSFDGVGGTLAHAYAPGEGIGGDAHFDEDEYWTKDL-KGFNLFLVAAHE 223
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H G +Y E + Y +PQD D
Sbjct: 224 FGHSLGLHHSNVL--GSLMYPAYLQTETRN-------YRLPQD----------------D 258
Query: 188 IVAVQKIYGAPKGS 201
+ +Q +YG P +
Sbjct: 259 VDGIQTLYGPPTST 272
>gi|209525083|ref|ZP_03273627.1| SCP-like extracellular [Arthrospira maxima CS-328]
gi|209494492|gb|EDZ94803.1| SCP-like extracellular [Arthrospira maxima CS-328]
Length = 370
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 1/109 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N TI +++ G ND++ NN+ F + GND G SG D+ + A
Sbjct: 63 FYGNQGNDTIIGGGGNDTLFGGKDNDLLEAGGGNNLLFGNLGNDTLIGGSGNDSLYGGAG 122
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + I N++I D + A D +
Sbjct: 123 NDVI-IGGPGNSLISGDKGLDTLTGGGGANQFILASSTADRDLITDFQP 170
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 32/149 (21%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G Y + TI GG+D L G +
Sbjct: 56 NDNTGRIFYG-------NQGNDTIIGGGGNDTL----------------------FGGKD 86
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + + G+ GND +IG S N+ + +GNDV G G
Sbjct: 87 NDLLEAGGGNNLLFGNLGNDTLIGGSGNDSLYGGAGNDVIIGGPGNSLISGDKGLDTLTG 146
Query: 319 YRFENAIIVYDANEHK---QDFLSDVERL 344
N I+ + + DF V+++
Sbjct: 147 GGGANQFILASSTADRDLITDFQPGVDKI 175
>gi|163744013|ref|ZP_02151381.1| hypothetical protein RG210_01642 [Phaeobacter gallaeciensis 2.10]
gi|161382701|gb|EDQ07102.1| hypothetical protein RG210_01642 [Phaeobacter gallaeciensis 2.10]
Length = 1728
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKN 259
S G++ + TI GG+D + G + L+ + G + +
Sbjct: 1477 SAGDDNDTFSGTN----YNDTINGGGGNDRI-----TGDRGEDLLHGGKGVDTLRGGDGD 1527
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + V +GND + G N++ G+D G G D + S +
Sbjct: 1528 DRLFLGSGNDRGVAGAGNDQMNGGGGNDMLHGGQGDDTLRGGQGADRVYGGQGSDSIRAG 1587
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + + L + D S L + L +G D+
Sbjct: 1588 QGNDTVFGGSGADRVRGDLGNDRISLGIDDDRAFGGSGDDS-LAGGDGEDTLNGGMGDDL 1646
Query: 380 FESMKHFYEFGLSEGR 395
F + GR
Sbjct: 1647 LRGGAGRDTFVFASGR 1662
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 45/141 (31%), Gaps = 24/141 (17%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+I G+D + G + DL N I+ + G SG+D
Sbjct: 1582 DSIRAGQGNDTV-FGGSGADRVRGDL------------GNDRISLGIDDDRAFGGSGDDS 1628
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + G+D+ G +G DTF + + +I F QD
Sbjct: 1629 LAGGDGEDTLNGGMGDDLLRGGAGRDTFVFASGRGNDRISDFN-----------VQDDQL 1677
Query: 340 DVERLRFADQCIDSVNVKQRS 360
++ F D+ Q
Sbjct: 1678 NLRDFSFTDREQTLAFGMQSD 1698
>gi|3646295|emb|CAA61753.1| MT4-MMP [Homo sapiens]
gi|119618934|gb|EAW98528.1| matrix metallopeptidase 17 (membrane-inserted) [Homo sapiens]
Length = 519
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSI-HSDIKFI 82
P LS+ + +P + R +AL WS + L F E + +DI+
Sbjct: 45 APTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQID 104
Query: 83 SS----NNGYVCTPRYDSRYF----------MEINFDKADVWRY--GIGKGTILSHNALH 126
S N+GY + + +FD + W + G L A+H
Sbjct: 105 FSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHFDDDEAWTFRSSDAHGMDLFAVAVH 164
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 165 EFGHAIGLSH 174
>gi|260432186|ref|ZP_05786157.1| type I secretion target repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416014|gb|EEX09273.1| type I secretion target repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 338
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 7/166 (4%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y+ E + ++ G DLL D TL G + I + G+ N
Sbjct: 99 YQGEDTIEGGDGRDVLHGGDGTDLLAGGADDDTLHGEDGDDILTGETGDDQLFGHFGNDL 158
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ G GND + G ++ G+D G +G D F + +
Sbjct: 159 LNGGAGSDALNGGQGNDDLSGADGDDSLQGGQGDDTLTGGAGADALFGGDGNDFVDGFSL 218
Query: 322 --ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
E + L+ + Q D + + E
Sbjct: 219 EEEPEADFLNGGAGDDTILAGTGDVVTGGQGADQIVLGDGQPDEKL 264
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 17/167 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+L ++G +N + E I GY+ TI + + G G D++ G + ++
Sbjct: 75 NLVIVGSAQNDVMTGQEGDDQINGYQGEDTIEGGDGRDVLHGGDGTDLLAGGADDDTLHG 134
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+D+ G +G D F + + L A D LS AD
Sbjct: 135 EDGDDILTGETGDDQLFGHFGNDLL----NGGAGSDALNGGQGNDDLSG------ADGDD 184
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQD-------VFESMKHFYEFGL 391
+ L A + L G D E F G
Sbjct: 185 SLQGGQGDDTLTGGAGADALFGGDGNDFVDGFSLEEEPEADFLNGGA 231
>gi|254469706|ref|ZP_05083111.1| type I secretion target repeat protein [Pseudovibrio sp. JE062]
gi|211961541|gb|EEA96736.1| type I secretion target repeat protein [Pseudovibrio sp. JE062]
Length = 2247
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL+ G +N I + G + I ++ +S+ G +G+D + G + ++
Sbjct: 653 DNTLLTGEQNDI---------VRGLAGDDLIKTYSGDDSLKGGAGDDRLFGGAGSDELNG 703
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
SGND DG G D + + Y R + +++ D + ++
Sbjct: 704 DSGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEI-NSSAGGNDTVRFID 753
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
K + TI G+D L + + G ++ G E N ++ + + +
Sbjct: 1042 TLKGTYLGDTIRGLDGNDTL--SGLNGND-----------TLEGGEGNDSLYGNNHDDRL 1088
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +G+D + G+S N+ G+D G SG DT+ + +I +++
Sbjct: 1089 FGGTGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEI----------NSS 1138
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQ 358
D + ++ L F D I +
Sbjct: 1139 AGGNDTVRFID-LNFEDAFIRLADFDN 1164
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ +S+ G + +D + G + ++ SGND DG G D + +
Sbjct: 1457 LYGLDGRDTLEGGEGNDSLYGGNHDDRLFGGAGSDFLRGDSGNDYLDGGIGDDELYGGSG 1516
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
Y R + +++ D + ++
Sbjct: 1517 DDTYIFGRGYGRDEI-NSSSGGNDTVRFID 1545
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ +S+ G + +D + G + ++ SGND DG G D + +
Sbjct: 863 LYGLDGRDTLEGGEGNDSLYGGNHDDRLFGGAGSDFLRGDSGNDYLDGGIGDDELYGGSG 922
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
Y R + +++ D + ++
Sbjct: 923 DDTYIFGRGYGRDEI-NSSAGGNDTVRFID 951
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ +S+ G + +D + G + ++ SGND DG G D + +
Sbjct: 1259 LYGLDGRDTLEGDEGNDSLYGGNHDDRLFGGAGSDELNGDSGNDYLDGGIGDDELYGGSG 1318
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
Y R + +++ D + ++
Sbjct: 1319 DDTYIFGRGYGRDEI-NSSAGGNDTVRFID 1347
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 231 LDLTLIGGVKNYIDLNTESWS-----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
+D T +G +D + + ++ G E N ++ + + G++G+D + G+S
Sbjct: 1637 IDGTYLGDTIRGLDGRDKLYGLDGRDTLEGGEGNDSLYGGNHHDQLFGAAGSDFLRGDSG 1696
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ G+D G SG DT+ + +I +++ D + ++
Sbjct: 1697 NDYLDGGIGDDELFGGSGDDTYIFGRGYGRDEI----------NSSSGGNDTVRFID 1743
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 231 LDLTLIGGVKNYIDLNTESWS-----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
+D T +G +D + + ++ G E N ++ + + G++G+D + G+S
Sbjct: 1835 IDGTYLGDTIRGLDGRDKLYGLDGRDTLEGGEGNDSLYGGNHHDQLFGAAGSDFLRGDSG 1894
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ G+D G SG DT+ + +I +++ D + ++
Sbjct: 1895 NDYLDGGIGDDELFGGSGDDTYIFGRGYGRDEI----------NSSSGGNDTVRFID 1941
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 43/117 (36%), Gaps = 11/117 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + T+ + V G +G+D++ S ++ +G+D G +G D +
Sbjct: 646 NMTGNAGDNTLLTGEQNDIVRGLAGDDLIKTYSGDDSLKGGAGDDRLFGGAGSDELNGDS 705
Query: 312 PSY-------LYKIYRFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVK 357
+ ++Y + +D + + +RF D ++ +
Sbjct: 706 GNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINSSAGGNDTVRFIDLNLEDAFIN 762
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 52/150 (34%), Gaps = 11/150 (7%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+DL ++ + T+S ++ G TI +++ G +GND + G N+
Sbjct: 1018 NDLEEVQENTDFNTTPLVGTQSAETLKGTYLGDTIRGLDGNDTLSGLNGNDTLEGGEGND 1077
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFL-- 338
+ ++ +D G +G D + + ++Y + +D +
Sbjct: 1078 SLYGNNHDDRLFGGTGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINS 1137
Query: 339 --SDVERLRFADQCIDSVNVKQRSILEYTA 366
+ +RF D + ++
Sbjct: 1138 SAGGNDTVRFIDLNFEDAFIRLADFDNKLQ 1167
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 11/141 (7%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DD + + G+ + + T I G T+ + + G G D + G N+
Sbjct: 820 DDTIRILENTGLSSTPIIGTAQGERIDGTYLGDTVRGLDGDDKLYGLDGRDTLEGGEGND 879
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFL-- 338
+ + +D G +G D + + ++Y + +D +
Sbjct: 880 SLYGGNHDDRLFGGAGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINS 939
Query: 339 --SDVERLRFADQCIDSVNVK 357
+ +RF D ++ +
Sbjct: 940 SAGGNDTVRFIDLNLEDAFIN 960
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 1/125 (0%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G+ D V G ++ + G D +G G D+ + + +
Sbjct: 1239 ERIDGTYLGDTVRGLDGDDKLYGLDGRDTLEGDEGNDSLYGGNHDDRLFGGAGSDELNGD 1298
Query: 329 DANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
N++ + D E + D R + +A D ++ I ++ ++ +
Sbjct: 1299 SGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINSSAGGNDTVRFIDLNLEDAFINIA 1358
Query: 388 EFGLS 392
+G S
Sbjct: 1359 NYGRS 1363
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 1/125 (0%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G+ D V G ++ + G D +G G D+ + + +
Sbjct: 1437 ERIDGTYLGDTVRGLDGDDKLYGLDGRDTLEGGEGNDSLYGGNHDDRLFGGAGSDFLRGD 1496
Query: 329 DANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
N++ + D E + D R + ++ D ++ I ++ ++ +
Sbjct: 1497 SGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINSSSGGNDTVRFIDLNLEDAFINIA 1556
Query: 388 EFGLS 392
G S
Sbjct: 1557 NSGRS 1561
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 79/278 (28%), Gaps = 69/278 (24%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
D+ Y + D ++YG G++ Y + +GG+D +
Sbjct: 702 NGDSGNDYLDGGIGDD-----ELYG----GSGDDTYIFGRGYGRDEINSS---AGGNDTV 749
Query: 232 DLTLIGGVKNYIDLN------TESWSSIGGYEKNMTIAQHTVI----------------- 268
+ +I++ +W G +++ + A + I
Sbjct: 750 RFIDLNLEDAFINIANYGRSLQFTWEKDGQFDQLLIDASGSWIERYEFADGTVLKKIEVL 809
Query: 269 ---------------------------------ESVVGSSGNDVVIGNSANNVFFESSGN 295
E + G+ D V G ++ + G
Sbjct: 810 DDLSVKATLIDDTIRILENTGLSSTPIIGTAQGERIDGTYLGDTVRGLDGDDKLYGLDGR 869
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSV 354
D +G G D+ + + + N++ + D E + D
Sbjct: 870 DTLEGGEGNDSLYGGNHDDRLFGGAGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIFG 929
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
R + +A D ++ I ++ ++ + +G S
Sbjct: 930 RGYGRDEINSSAGGNDTVRFIDLNLEDAFINIANYGRS 967
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 1/130 (0%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I E + G+ D + G + + G D +G G D+ +
Sbjct: 1826 IVGTAHGERIDGTYLGDTIRGLDGRDKLYGLDGRDTLEGGEGNDSLYGGNHHDQLFGAAG 1885
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + N++ + D E + D R + ++ D ++ I ++
Sbjct: 1886 SDFLRGDSGNDYLDGGIGDDELFGGSGDDTYIFGRGYGRDEINSSSGGNDTVRFIDLNLE 1945
Query: 381 ESMKHFYEFG 390
++M + +G
Sbjct: 1946 DAMLSYTRYG 1955
Score = 44.0 bits (102), Expect = 0.079, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 42/125 (33%), Gaps = 1/125 (0%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G+ D + G + + G D +G G D+ + + +
Sbjct: 1635 ERIDGTYLGDTIRGLDGRDKLYGLDGRDTLEGGEGNDSLYGGNHHDQLFGAAGSDFLRGD 1694
Query: 329 DANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
N++ + D E + D R + ++ D ++ I ++ ++ +
Sbjct: 1695 SGNDYLDGGIGDDELFGGSGDDTYIFGRGYGRDEINSSSGGNDTVRFIDLNLEDAFINIA 1754
Query: 388 EFGLS 392
G S
Sbjct: 1755 NSGRS 1759
>gi|114652043|ref|XP_001157566.1| PREDICTED: matrix metalloproteinase 14 isoform 2 [Pan troglodytes]
Length = 545
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|78777398|ref|YP_393713.1| hemolysin-type calcium-binding region [Sulfurimonas denitrificans DSM
1251]
gi|78497938|gb|ABB44478.1| Hemolysin-type calcium-binding region [Sulfurimonas denitrificans DSM
1251]
Length = 1864
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 194 IYGAPKGSL------GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
IYG + +Y I G D +D + I LN
Sbjct: 1421 IYGDQDDDTIDAGDGDDTVYGYGRYTTGQTNNDKIDGGDGFDTIDYSTTSDA---ITLNL 1477
Query: 248 ESWSSIGGYEKNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + ++ I ESVVGS GND + N + SG D
Sbjct: 1478 GNVVGGYATVEFLSATGTAGIYNDLIKNFESVVGSRGNDTITANDSGMTLDGWSGVDKLY 1537
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G +G DT N D L + + F +Q I +
Sbjct: 1538 GGAGADTII------------ARNQATEILDGGGGSDTLKLAQNVDFRNQTISN 1579
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/274 (13%), Positives = 75/274 (27%), Gaps = 47/274 (17%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---------- 251
+ I K T+ G D +D +Y+++
Sbjct: 1070 DTIDGRGGNNKLYGGDGGDTLISGSGKDYIDGGADTDTVSYVNMIEGVRVRLDRPNGEEY 1129
Query: 252 SIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ + + +E++ GSS +D + GN+ N +G+D G D
Sbjct: 1130 DYAHLNSDLVNEKDRILNVENITGSSYDDTIYGNANTNFIKGGAGDDRIFAGGGYDFIDG 1189
Query: 310 YAPSY-------------------------LYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A S + + ++ A ++ D + D+E++
Sbjct: 1190 GAGSDWITYKPSDYDFNTTKPSFMETFQGITVDLNSSDFVMVKETATDNLIDLIKDIEKI 1249
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF---ESMKHFYEFGLSEGRDITFDS 401
D + D++ G + S + G +
Sbjct: 1250 SATDGIDKIYGSNSADEEFWGWGGNDILYGRGGNDILHGGSGDDYIRPGRGVDKSYGDTG 1309
Query: 402 YLYLGSYDDLR-----NVFGSDRGAAARHYITHG 430
YL YDD + +H + G
Sbjct: 1310 DNYLELYDDGVKDKAFQAIRLNSDGKVQHKLVAG 1343
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 13/131 (9%)
Query: 248 ESWSSIGGYEKNMTI-AQHTVI----ESVVGSSGNDVVIGN-SANNVFFESSGNDVFDGS 301
S+SS +I A I E++ GS ND + GN + +N G+D DG
Sbjct: 1016 GSFSSSKQESGLDSIQATGYDIYKDIENITGSKYNDTIYGNLTKDNTLSGLGGSDTIDGR 1075
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G + + ++ I D +S V + + ++
Sbjct: 1076 GGNNKLYGGDGGDTLISGSGKDYID----GGADTDTVSYVNMI---EGVRVRLDRPNGEE 1128
Query: 362 LEYTASYEDLI 372
+Y DL+
Sbjct: 1129 YDYAHLNSDLV 1139
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 5/139 (3%)
Query: 232 DLTLIGGVKNYIDL-NTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D + I G + L E +S IG G N I + + + G G+D + G ++
Sbjct: 1344 DGSWIDGYNSIDGLEIAEGFSGIGLGNGTNDEIHGNELANIINGYGGDDDIYGYGGDDTI 1403
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
SG D G +G D + ++ + Y Q ++ +++ D
Sbjct: 1404 RGGSGKDKIYGGAGKDIIYGDQDDDTIDAGDGDDTVYGYGRYTTGQ---TNNDKIDGGDG 1460
Query: 350 CIDSVNVKQRSILEYTASY 368
+
Sbjct: 1461 FDTIDYSTTSDAITLNLGN 1479
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 16/149 (10%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+I G + N TI + ++ + G+D + G NN + G D SG D
Sbjct: 1043 NITGSKYNDTIYGNLTKDNTLSGLGGSDTIDGRGGNNKLYGGDGGDTLISGSGKDYIDGG 1102
Query: 311 APSYLYKIYRFENAIIVYDANEHKQ---------------DFLSDVERLRFADQCIDSVN 355
A + + V + + D + +VE + +
Sbjct: 1103 ADTDTVSYVNMIEGVRVRLDRPNGEEYDYAHLNSDLVNEKDRILNVENITGSSYDDTIYG 1162
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++ A + + G D +
Sbjct: 1163 NANTNFIKGGAGDDRIFAGGGYDFIDGGA 1191
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 56/187 (29%), Gaps = 26/187 (13%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDL-----------LDLTLIGGVKNYI----DLNT 247
GN+ Y + + S G D LD I +LN
Sbjct: 1647 GNDTYNFTGSTLSANMNFYLDASSGTDTLIMGVNQTINMLDNYYNTFETFQIGTDSNLNI 1706
Query: 248 ESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++++ G + K+ + V +++G SGND N N DG SG
Sbjct: 1707 KAYNDNGRTFYAHNKDFSAVDGDV--NLIGGSGNDTFYANYEA--LLAGKLN--IDGGSG 1760
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + F +A I + + D +S + + + +
Sbjct: 1761 SD-MVDVRTTQTNAALTFNDADIFNNIERLELDTISSTNSINIDARAMKQWIGSSSELTL 1819
Query: 364 YTASYED 370
A+
Sbjct: 1820 DIANNTQ 1826
Score = 38.6 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + +I +++ I + I V + V ++G+D ++ ++ + SG +
Sbjct: 596 GKDEGFILSKEPNYNIIKDGSGDNIIYGGIVKDVVYDAAGDDTYYLSAGDDTLYGGSGTN 655
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G + S K Y ++ + + N +S++E L +++ +
Sbjct: 656 RIYGDN-------DNGSAETKKYDGKDTVSYENVNSFG---ISEIELL--SNEGAITAQE 703
Query: 357 KQRSILEYTASYE 369
Q+ Y +
Sbjct: 704 SQKLGGSYDEDSD 716
>gi|163739102|ref|ZP_02146514.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161387502|gb|EDQ11859.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 1725
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 63/196 (32%), Gaps = 11/196 (5%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKN 259
S G++ + TI GG+D + G + L+ + G + +
Sbjct: 1474 SAGDDNDTFSGTN----YNDTINGGGGNDRI-----TGDRGEDLLHGGKGVDTLRGGDGD 1524
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + V +GND + G N++ G+D G G D + S +
Sbjct: 1525 DRLFLGSGNDRGVAGAGNDQMNGGGGNDMLHGGQGDDTLRGGQGADRVYGGQGSDSIRAG 1584
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + + L + + D S L + L +G D+
Sbjct: 1585 QGNDTVFGGSGADRVRGDLGNDQISLGIDDDRAFGGSGDDS-LAGGDGEDTLNGGMGDDL 1643
Query: 380 FESMKHFYEFGLSEGR 395
F + GR
Sbjct: 1644 LRGGAGRDTFIFASGR 1659
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 24/141 (17%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+I G+D + G + DL N I+ + G SG+D
Sbjct: 1579 DSIRAGQGNDTV-FGGSGADRVRGDL------------GNDQISLGIDDDRAFGGSGDDS 1625
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + G+D+ G +G DTF + + +I F D
Sbjct: 1626 LAGGDGEDTLNGGMGDDLLRGGAGRDTFIFASGRGNDRISDFN-----------VLDDQL 1674
Query: 340 DVERLRFADQCIDSVNVKQRS 360
++ F D+ Q
Sbjct: 1675 NLRDFSFTDREQALAFGMQSD 1695
>gi|291569831|dbj|BAI92103.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 515
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 68/209 (32%), Gaps = 27/209 (12%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPF-----------IQTIYDSGGDDLL-----DLTLIG 237
+YG G N +Y + G++ L D TL+G
Sbjct: 214 LYG---GGGNNTLYGFTGNDTLIGGGGNDLLYGGQNNDFLDGGNGNNTLYGGLNDDTLLG 270
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G+ + + G + N T+ ++++G +GND++ GN ++ G+D
Sbjct: 271 GIGRDLLFGEAGNDFLDGGDGNDTLYGGEDNDTLLGGNGNDLLFGNQGDDSLDGGPGDDT 330
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDV---ERLRFADQ 349
G G DT + + + + D ++ D L + L
Sbjct: 331 LYGGKGDDTLLGSQGNDILLGNMENDILYGGDGDDCLYGGQGNDTLYGGRGRDYLSGDRG 390
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
V V + + + L+ G D
Sbjct: 391 NDFLVGVDTSADFPGLTTIDTLVGGEGFD 419
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 15/150 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D GG N + L TE + G N T+ T ++++G GND++ G N+
Sbjct: 193 DYVFEGGDGNSLILGTEGNDLLYGGGGNNTLYGFTGNDTLIGGGGNDLLYGGQNNDFLDG 252
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--------- 342
+GN+ G DT L F A + D L E
Sbjct: 253 GNGNNTLYGGLNDDTLLGGIGRDLL----FGEAGNDFLDGGDGNDTLYGGEDNDTLLGGN 308
Query: 343 --RLRFADQCIDSVNVKQRSILEYTASYED 370
L F +Q DS++ Y +D
Sbjct: 309 GNDLLFGNQGDDSLDGGPGDDTLYGGKGDD 338
Score = 44.7 bits (104), Expect = 0.055, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 19/153 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ P T+Y GDD L +G N I L + G + + + +
Sbjct: 319 DDSLDGGPGDDTLYGGKGDDTL----LGSQGNDILLGNMENDILYGGDGDDCLYGGQGND 374
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYYA------PSY 314
++ G G D + G+ N+ + D G G DTF +
Sbjct: 375 TLYGGRGRDYLSGDRGNDFLVGVDTSADFPGLTTIDTLVGGEGFDTFVLGNENGPFYDNG 434
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
I + ++ + N L + F+
Sbjct: 435 NDDINGVADYALILNFNSTTDVILLSNDDYLFS 467
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 1/126 (0%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S + V G N++ + GND+ G G +T + + + I N ++ N
Sbjct: 190 PSADYVFEGGDGNSLILGTEGNDLLYGGGGNNTLYGFTGNDTL-IGGGGNDLLYGGQNND 248
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D + L + R +L A + L G D +
Sbjct: 249 FLDGGNGNNTLYGGLNDDTLLGGIGRDLLFGEAGNDFLDGGDGNDTLYGGEDNDTLLGGN 308
Query: 394 GRDITF 399
G D+ F
Sbjct: 309 GNDLLF 314
>gi|170030728|ref|XP_001843240.1| matrix metalloproteinase [Culex quinquefasciatus]
gi|167867916|gb|EDS31299.1| matrix metalloproteinase [Culex quinquefasciatus]
Length = 586
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 63/203 (31%), Gaps = 53/203 (26%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
+ W I Y ++ + + + A EW++ +L F +DI
Sbjct: 133 ESWRKRKITYFIANWSSKVGEDSVAKF-------MQKAFNEWARYSNLRFVRVYDPSADI 185
Query: 80 KFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGK---GTILS 121
+ + P + Y +I+FD+ + W+ + G
Sbjct: 186 IVGFGSGHHGDNYPFDGPGNILAHAFYPYEMASYGGDIHFDEDENWKENSTQLADGVDFY 245
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A+HE+GH+LGL H Y +S+M
Sbjct: 246 SVAIHELGHSLGLAHSPVY-------------------SSLM--------FPYYKGITQG 278
Query: 182 TPMVSDIVAVQKIYGAPKGSLGN 204
T DI+AV K+Y +
Sbjct: 279 TLDYDDILAVYKLYIQNPYITDD 301
>gi|188584077|ref|YP_001927522.1| haloacid dehalogenase [Methylobacterium populi BJ001]
gi|179347575|gb|ACB82987.1| Haloacid dehalogenase domain protein hydrolase [Methylobacterium
populi BJ001]
Length = 1867
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 62/217 (28%), Gaps = 38/217 (17%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-----------------PDAFK 441
FD+ Y Y DL ++ A +H+ HG +EGR P F
Sbjct: 695 FDTRFYRSYYPDLAT---FEQAALRQHFFQHGQREGRFAEPASLIAHLEAEHGALPKDFD 751
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
A Y H DL D K H+ FG E R D + DL
Sbjct: 752 AFIYRKLHSDL------NFDEEWQLKAHYLQFGRNERRRYQSDIDIDEEELRDLVRSGVI 805
Query: 502 DRGAAARHYITHGVK------EGRNPDA------FKALEYIASHEDLINAFADAPDLVQA 549
AA R G E N +A F +E+ A + +
Sbjct: 806 ALTAAERTSYKVGASVRKLLFERANIEAGPWLDHFDYVEFQALNYQWTGPLKSRTHALAV 865
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
D F+ Y + +L N +
Sbjct: 866 FLDRGPANLAALSLKARFDHAYYTRIHPELANASAEE 902
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 24/95 (25%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DIT----------------FD 400
Y + Y DL + +HF++ G EGR + FD
Sbjct: 695 FDTRFYRSYYPDLAT---FEQAALRQHFFQHGQREGRFAEPASLIAHLEAEHGALPKDFD 751
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+++Y + DL A HY+ G E R
Sbjct: 752 AFIYRKLHSDLNFDEEWQLKA---HYLQFGRNERR 783
>gi|148979436|ref|ZP_01815520.1| hypothetical protein VSWAT3_23579 [Vibrionales bacterium SWAT-3]
gi|145961795|gb|EDK27089.1| hypothetical protein VSWAT3_23579 [Vibrionales bacterium SWAT-3]
Length = 5974
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 14/113 (12%)
Query: 235 LIGGVKNYIDLNTESWSS-----IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
IDLN S+ + G ++ + + SGND + G + ++
Sbjct: 5784 NDTATSAAIDLNVNIVSNAVDINLAGETDDVQLLAGANATDLTAGSGNDRLEGGAGDDTL 5843
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
GND G G D + + + + +D ++D
Sbjct: 5844 IGGDGNDTLIGGGGSDILTGGDGMDSF---------VWLNIEDGVEDTITDFN 5887
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 30/71 (42%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ +D+ L G + L + + + N + ++++G GND +IG ++
Sbjct: 5800 SNAVDINLAGETDDVQLLAGANATDLTAGSGNDRLEGGAGDDTLIGGDGNDTLIGGGGSD 5859
Query: 288 VFFESSGNDVF 298
+ G D F
Sbjct: 5860 ILTGGDGMDSF 5870
>gi|113477138|ref|YP_723199.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168186|gb|ABG52726.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 678
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 14/175 (8%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
SD + +IYG G+ + + + +++ T N I
Sbjct: 490 ASDQAGISRIYGGIHFEDGD----LNGRALGREVAEHVWEK--------TQGVITPNTI- 536
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ T ++ G N I + + V G+ GND++ G N++ +G D+ G G
Sbjct: 537 IATNEKDNLIGSVTNDLIYSNRSDDIVFGNEGNDMLCGGKGNDIVNGGAGADLIYGDFGD 596
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
D + + I+ D E D + + L F I + R
Sbjct: 597 DILIGGVGGDNFHFRSNDGNNIITD-FEDGIDVIGLGDGLSFQQLTISQIGNDTR 650
>gi|167427311|gb|ABZ80287.1| olfactory receptor, family 51, subfamily L, member 1 (predicted)
[Callithrix jacchus]
Length = 504
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 68/215 (31%), Gaps = 58/215 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKF 81
W Y + Y+ + ++ A+ WS V L F++ +DIK
Sbjct: 29 WDKYTLTYRIINYPHDMKPSTV-------KDSIYNAVSIWSSVTSLIFQQVQNEDADIKI 81
Query: 82 IS------------SNNGYVCTPR-YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
G++ +S ++FDK + W G L A HEI
Sbjct: 82 SFWQWDHDDCWPFDGPGGFLGHAFLPNSENPGVVHFDKDEHWS-ASNTGFNLFLVATHEI 140
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMV- 185
GH+LGL H G+ N S+M +Y+ + T +
Sbjct: 141 GHSLGLKHSGNRN-------------------SIMYPTYW----------YHDPRTFHLS 171
Query: 186 -SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
DI +Q +Y + + + P
Sbjct: 172 ADDIQRIQGLY---EITFKVTMVDWNNSDAMEPIF 203
>gi|163741925|ref|ZP_02149314.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
gi|161384646|gb|EDQ09026.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
Length = 969
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 5/141 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ Q + Y GDD LD + N +S+ G +
Sbjct: 195 TGDGDGTVTFGGQTAYFWEFERFYLHSGDDTLDGSAATSAINVQ--TGGGDNSVTGGMGD 252
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI+ ++V G +G D + S ++V SSG D G +G D A S
Sbjct: 253 DTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSG-DTLVGGAGNDQITINAASGGS--V 309
Query: 320 RFENAIIVYDANEHKQDFLSD 340
A +V D D+ S+
Sbjct: 310 APSGATVVSDGGSASGDYDSN 330
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 55/167 (32%), Gaps = 26/167 (15%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A ++G++ + I++I + D +D + G Y++
Sbjct: 513 AGTVTVGSDTAQFSE-------IESITGTEKSDYIDGSAQSGNLAYVN----------SG 555
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---------GLDTF 307
+ TI + + + G +GND + G + + +G+D DG S G DT
Sbjct: 556 GGDDTILGGSGNDDLRGGAGNDRLEGRAGTDDLRGGAGDDYLDGGSGGDYIDAGMGSDTV 615
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
++ + V + D + + + D
Sbjct: 616 IGGTGDDTIQLTADADRDEVILEDGSGSDLIYNFDLGDSGDGTTVDQ 662
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+S+ G N TI+ + G G+D + G+S +++ F G+D +D +G DTF+
Sbjct: 90 NSMSGTSGNDTISGDANDNVIYGGDGDDYLTGSSGDDIIFGGEGSDNYDTDTGNDTFYGE 149
Query: 311 APSYLYKIYRFENAIIVYDANEHKQ 335
IY + +Y +
Sbjct: 150 GGDDWVAIYDNMDGESLYGGETGET 174
Score = 44.0 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 43/146 (29%), Gaps = 19/146 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQ---TIYDSGG------------DDLLDLTLIG-GV 239
G P + +++Y + + +D G + L + + V
Sbjct: 348 GTPGTTGSDDVYDSITVLNTTDGAFLGVSQFDVGIDKVYLSEEPVSFTNTLASSGVSDFV 407
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
Y + NT+S+ ++ SV+ + + G ++ G D D
Sbjct: 408 VTYANGNTQSFRFYNDGGAAISDPAQFFGTSVISGA---TLSGGEGDDTLTGGYGADSID 464
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAI 325
G G D I E +
Sbjct: 465 GGDGQDQIILQDGFGNDTITGGEGGV 490
Score = 37.8 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 72/294 (24%), Gaps = 45/294 (15%)
Query: 77 SDIKFISSN------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
D S + + + + + + + D Y T H
Sbjct: 10 GDGTLDSGDGISANQSAFTSSDVIGTGSWTWSGQYQGDGQTYSNVTDTGTYHYG------ 63
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS----------MMDASFGYC 180
Y Y + + MS D+ Y
Sbjct: 64 ----SDGNVYFVPDTWYTASGSASATTIPANSMSGTSGNDTISGDANDNVIYGGDGDDYL 119
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQQKDSPFIQTIYDS----------GGDD 229
DI I+G + + IYD+ G+
Sbjct: 120 TGSSGDDI-----IFGGEGSDNYDTDTGNDTFYGEGGDDWVAIYDNMDGESLYGGETGET 174
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEK-NMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
L D+ + G +D+N G A E SG+D + G++A +
Sbjct: 175 LGDMLEVYGDYAGVDVNVTFTGDGDGTVTFGGQTAYFWEFERFYLHSGDDTLDGSAATSA 234
Query: 289 FFE--SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G++ G G DT A + ++I ++ D
Sbjct: 235 INVQTGGGDNSVTGGMGDDTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSGD 288
>gi|270017081|gb|EFA13527.1| hypothetical protein TcasGA2_TC006957 [Tribolium castaneum]
Length = 345
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 69/206 (33%), Gaps = 70/206 (33%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-----------TSIHSDIKFIS 83
L + + +E+A+ A +W V +L FE S+ DI
Sbjct: 100 WNKTNLKWYFSLATNEMKELAQKAFDQWESVSNLKFEYWHSQPSAVGEYNSVKPDILISF 159
Query: 84 SN-----------NGYVCTPRYDSRYFM-------------EINFDKADVWRYGIGKGTI 119
SN +C+ +D + + I+FDK++ W +G T
Sbjct: 160 SNTLFQHNHNSRCQKGICSSSFDGKGNVLAHGFFPNNDECLGIHFDKSENWYFGESSNTP 219
Query: 120 LSHN-----ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM-SYFMPQDSMM 173
LHEIGH LG+ H + N S+M +Y+ +
Sbjct: 220 DDQTNFYTVLLHEIGHTLGIEHSANNN-------------------SIMYAYYKGDIDKL 260
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPK 199
D+ A+Q +YG P+
Sbjct: 261 TR----------DDMWAIQYLYGRPE 276
>gi|291297796|ref|YP_003509074.1| hypothetical protein Snas_0263 [Stackebrandtia nassauensis DSM
44728]
gi|290567016|gb|ADD39981.1| hypothetical protein Snas_0263 [Stackebrandtia nassauensis DSM
44728]
Length = 742
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 7/197 (3%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSS-IGGY 256
+ IY E + G+D + D I G+ + S + G
Sbjct: 402 DEIYGHEGNDLISGDGGQDYVDGQDGNDNISGGGDTDTIYGLDGDDTITGGSGKDYLEGA 461
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E N ++ T + V G G+D + G+ N+V + G D DG G D +
Sbjct: 462 EGNDSVNGGTGEDVVSGGRGDDTLHGDDGNDVIYAGDGKDSVDGGEGNDKLLVQDGDNVA 521
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
N V D + K + D ++ ++ + + +
Sbjct: 522 SDKVASNGYSVNDTDTVKNVKIVDSSFIKVDGSDEFEDRMRADLNMLSGSENGTKMLANL 581
Query: 377 QDVFESMKHFYEFGLSE 393
+D ++ + Y G E
Sbjct: 582 EDKIDNSRDDYMPGERE 598
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+I G E N I T + + G SG D + G+ N++ G D DG G D
Sbjct: 375 STIFGGEGNEEIQGSTKDDKISGGSGEDEIYGHEGNDLISGDGGQDYVDGQDGNDNISGG 434
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ IY + + + +D+L E
Sbjct: 435 GDTD--TIYGLDGDDTITGGS--GKDYLEGAE 462
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 35/129 (27%), Gaps = 1/129 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G I H + + G G D V G N+ D G G DT +
Sbjct: 395 ISGGSGEDEIYGHEGNDLISGDGGQDYVDGQDGNDNISGGGDTDTIYGLDGDDTITGGSG 454
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y N + E + L D + ++ + L+
Sbjct: 455 KD-YLEGAEGNDSVNGGTGEDVVSGGRGDDTLHGDDGNDVIYAGDGKDSVDGGEGNDKLL 513
Query: 373 QVIGQDVFE 381
G +V
Sbjct: 514 VQDGDNVAS 522
>gi|149523997|ref|XP_001512754.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 558
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 20/140 (14%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
++I +LL W + ++ LT + ++ A W+ V L+
Sbjct: 90 NQKILKYLLLG-RWRKRNLTFRILNLTPDLPPQMV-------RDALHAAFDYWTAVTPLS 141
Query: 70 FEET-SIHSDIKFIS------SNNGYVCTPRYDSRYFMEINF-----DKADVWRYGIGKG 117
F E + H+DI+F + P + + N +++ +G
Sbjct: 142 FREVHAGHADIRFFFHRRRVAGCSHAFDGPGRALKGIINANVGMLREAASNLMSXXXXRG 201
Query: 118 TILSHNALHEIGHALGLMHP 137
L A HE+GHALGL H
Sbjct: 202 INLRIIAAHELGHALGLGHS 221
>gi|229518633|ref|ZP_04408076.1| hypothetical protein VCC_002658 [Vibrio cholerae RC9]
gi|229343322|gb|EEO08297.1| hypothetical protein VCC_002658 [Vibrio cholerae RC9]
Length = 2821
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 31/233 (13%)
Query: 136 HPGSY---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
HP Y G ++ +N + ++ +Y+ ++ + T I
Sbjct: 2518 HPNEYLGRGGVDSFLLTKSNGDNANLNIALNAYYEGTTAVAPVTQQVAVT-----IDTDL 2572
Query: 193 KIYGAPK--------GSLGNNIYKIEV---QQKDSPFIQTIYDSG--GDDLL---DLTLI 236
I+ N +Y +P T+ DS +D++ D L+
Sbjct: 2573 VIHSGNSNDYIDLGISRADNTVYTGSSIPNFNNSTPSQSTLADSAFMKNDVITDHDGVLL 2632
Query: 237 GGVKNYID-----LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
V++ I +N S + + G N+ ++++G GND + G + N+
Sbjct: 2633 QSVQSQIQPITDTVNLGSGNDTVYGGGGNLAAYGGAGNDTLIGGDGNDALRGGADNDYLS 2692
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
GNDV G SG D + E+ D + + D ++D
Sbjct: 2693 GGRGNDVLRGDSGNDVLIGGLGHDILTGGSGEDLFKWVDGDLDGSTDRITDFH 2745
>gi|291567845|dbj|BAI90117.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 799
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI ++++G GND + G N+ G D G +G DT
Sbjct: 603 LRGTPDNNTIYGLAGNDTLIGGKGNDFLDGGLGNDSLVGGGGRDTLIGGAGNDTLNGGPG 662
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ E+ + A +H DF +++ ++ + + ++ +L
Sbjct: 663 ADIFVFGLGESRVA---APDHITDFDIGTDKIDLLNRRGRDIGAPENFTRARNSNAPNLR 719
Query: 373 QVIGQ 377
+++ Q
Sbjct: 720 RLVNQ 724
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I G N T+ + + G GND ++G + +GND +G G D F +
Sbjct: 610 NTIYGLAGNDTLIGGKGNDFLDGGLGNDSLVGGGGRDTLIGGAGNDTLNGGPGADIFVFG 669
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL 338
+ I +D K D L
Sbjct: 670 LGESR---VAAPDHITDFDIGTDKIDLL 694
>gi|227112734|ref|ZP_03826390.1| putative hemagglutinin/hemolysin-related protein [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 1159
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
YI ++ + + N + + + G GND +IG N++ + +G+D+
Sbjct: 987 HGYIATHSAEFDLSSAKDGNDILNGGAGNDILFGQGGNDTLIGGEGNDLLYGGAGDDILI 1046
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
G +G DT A + +K + ++ D N + D +
Sbjct: 1047 GGAGGDTLIGGAGADTFKWQAGDIGNDVIKDFNAKEGDRI 1086
Score = 44.3 bits (103), Expect = 0.068, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 29/100 (29%), Gaps = 3/100 (3%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+ N++ +GND+ G G DT + + +
Sbjct: 998 DLSSAKDGNDILNGGAGNDILFGQGGNDTLIGGEGND---LLYGGAGDDILIGGAGGDTL 1054
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ F Q D N + DL ++G+
Sbjct: 1055 IGGAGADTFKWQAGDIGNDVIKDFNAKEGDRIDLSDLVGE 1094
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D+L+ GG N I ++ G E N + + ++G +G D +IG +
Sbjct: 1003 KDGNDILN----GGAGNDILFGQGGNDTLIGGEGNDLLYGGAGDDILIGGAGGDTLIGGA 1058
Query: 285 ANNVFF---ESSGNDVF 298
+ F GNDV
Sbjct: 1059 GADTFKWQAGDIGNDVI 1075
>gi|149716837|ref|XP_001498859.1| PREDICTED: similar to matrilysin [Equus caballus]
Length = 267
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 52/166 (31%), Gaps = 39/166 (23%)
Query: 53 EVARWALGEWSKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY------------- 98
++ AL WS+ + L F+ S +DI + + +D
Sbjct: 127 QLVAKALKMWSEEIPLHFKRVSWGTADIMIGFARGAHGDPYPFDGPGNTLAHAFSPGPGL 186
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+ +FD+ + W G G A HE GH+LGL H +
Sbjct: 187 GGDAHFDEDERWTDGSSIGINFLFAATHEFGHSLGLGHSSDPSA---------------- 230
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
VM + DI +QK+YG S N
Sbjct: 231 ---VMYPTYRDGDPKNFKLS------RDDIKGIQKLYGERSDSRMN 267
>gi|301761496|ref|XP_002916173.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-21-like
[Ailuropoda melanoleuca]
Length = 469
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 73/218 (33%), Gaps = 51/218 (23%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNP--NAQEVARWALGEWSKVVDLTFEE--TSIHS-- 77
+ LT L + + + R A WS+V L F E + +
Sbjct: 65 RGGTRAFTKRTLTWRLLGEGASGQLAVDEQRHILRLAFRMWSEVTPLDFREDLAAPGAAV 124
Query: 78 DIKFISSNNGYVCTPRYDSRY---------FMEINFDKADVWRY-GIGKGTILSHNALHE 127
DIK ++ PR +I+FD + + G L A+HE
Sbjct: 125 DIKLGFGRGRHLGCPRVFDGSGQEFAHAWRLGDIHFDDDEHFTPPTSDAGISLLKVAVHE 184
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV-- 185
IGH LGL P +Y G S+M PM
Sbjct: 185 IGHVLGL--PHTYRTG-----------------SIM-----------QPNYIPQEPMFEL 214
Query: 186 --SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
SD A+QK+YG+ +GS + + ++++ T
Sbjct: 215 DWSDRKAIQKLYGSCEGSF-DTAFDWIRKERNQHGAVT 251
>gi|300864894|ref|ZP_07109739.1| hemolysin-type calcium-binding region (modular protein)
[Oscillatoria sp. PCC 6506]
gi|300337098|emb|CBN54889.1| hemolysin-type calcium-binding region (modular protein)
[Oscillatoria sp. PCC 6506]
Length = 529
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 11/146 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--------GYEKNMTIAQHTVIESVVG 273
IY G+D G + I S G G + N + +S+ G
Sbjct: 202 IYAGKGNDT---ASGGAASDTILGGEGDDSLFGNDDNDFIFGGKANDALDGGFGDDSIAG 258
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D +IG N+ + ND+ G G DT + S L+ + ++ + +
Sbjct: 259 GLGDDTIIGGFGNDNLLGAENNDILIGGEGTDTLTGGSGSDLFVLGSGAGSLSIITDYDD 318
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQR 359
DF+ L F D + N R
Sbjct: 319 AADFVGLPSNLSFNDLQVQQGNGLNR 344
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 61/205 (29%), Gaps = 31/205 (15%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TIY GGDD L+ + + G + +I +++VG+SG D+
Sbjct: 29 DTIYGVGGDDTLEGSQ-------------GLDQLFGGDGADSILGEEGNDTLVGNSGRDL 75
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G ++ GND G DT F A + N D +
Sbjct: 76 IFGGVGDDCIHGGLGNDTILGQDNNDTLFGDAGDD----FVNGNLGFDIVTGGTGNDTIR 131
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDI 397
E L + L G D + F G E
Sbjct: 132 GGED------DDSVFGNADDDYLYGDTGNDSLSGDRGSDQLLGGDGQDFLTGGDGE---- 181
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAA 422
D+ D L FG+D+ A
Sbjct: 182 --DTLFGEADNDVLNGDFGNDQIYA 204
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 4/145 (2%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I+ G+D + +G N + G + T +++ G +D
Sbjct: 83 DCIHGGLGNDTI----LGQDNNDTLFGDAGDDFVNGNLGFDIVTGGTGNDTIRGGEDDDS 138
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
V GN+ ++ + +GND G G D E+ + N+
Sbjct: 139 VFGNADDDYLYGDTGNDSLSGDRGSDQLLGGDGQDFLTGGDGEDTLFGEADNDVLNGDFG 198
Query: 340 DVERLRFADQCIDSVNVKQRSILEY 364
+ + S +IL
Sbjct: 199 NDQIYAGKGNDTASGGAASDTILGG 223
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 62/204 (30%), Gaps = 17/204 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ + + DS F D D + +L G + L + + G +
Sbjct: 122 TGGTGNDTIR-GGEDDDSVFGNADDDYLYGDTGNDSLSGDRGSDQLLGGDGQDFLTGGDG 180
Query: 259 ---------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
N + + + GND G +A++ G+D G+ D F
Sbjct: 181 EDTLFGEADNDVLNGDFGNDQIYAGKGNDTASGGAASDTILGGEGDDSLFGNDDNDFIFG 240
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTA 366
+ +++I A D + + L A+ + + L +
Sbjct: 241 GKANDALDGGFGDDSI----AGGLGDDTIIGGFGNDNLLGAENNDILIGGEGTDTLTGGS 296
Query: 367 SYEDLIQVIGQDVFESMKHFYEFG 390
+ + G + + +
Sbjct: 297 GSDLFVLGSGAGSLSIITDYDDAA 320
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 1/134 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G ++N I + + + G G+D + G ++ S G D G G D+
Sbjct: 3 NIFGTDENDEIVGNPASDRIRGLDGDDTIYGVGGDDTLEGSQGLDQLFGGDGADSILGEE 62
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + I ++ L + + + D + ++ +
Sbjct: 63 GNDTLVGNSGRDLIFGGVGDDCIHGGLGN-DTILGQDNNDTLFGDAGDDFVNGNLGFDIV 121
Query: 372 IQVIGQDVFESMKH 385
G D +
Sbjct: 122 TGGTGNDTIRGGED 135
>gi|197103998|ref|YP_002129375.1| hypothetical protein PHZ_c0532 [Phenylobacterium zucineum HLK1]
gi|196477418|gb|ACG76946.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 449
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 15/172 (8%)
Query: 222 IYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ G+D L T L G + + + + G N T+ + VVG G
Sbjct: 257 LHGGAGNDTLTGTSGENYLRGDAGDDRLVGGPLFDDLHGNIGNDTVYGGAGGDWVVGGQG 316
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + G+ ++ + GNDV G +G D ++ + A + D
Sbjct: 317 HDQLFGDDGHDAVLGNLGNDVLLGGTGNDVMRGGQGDDAVTGGAGDDWL----AGDRGSD 372
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYED---LIQVIGQDVFESMKH 385
L+ R AD IL++ + D L+ G + ++S
Sbjct: 373 TLAGA---RGADTFHSFAGAGLDHILDFNFAEGDRLNLVAGSGYNAYQSGAD 421
>gi|4505219|ref|NP_002414.1| matrilysin preproprotein [Homo sapiens]
gi|116861|sp|P09237|MMP7_HUMAN RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|35799|emb|CAA30678.1| unnamed protein product [Homo sapiens]
gi|35803|emb|CAA77942.1| PUMP [Homo sapiens]
gi|54781375|gb|AAV40839.1| matrix metalloproteinase 7 (matrilysin, uterine) [Homo sapiens]
gi|119587427|gb|EAW67023.1| matrix metallopeptidase 7 (matrilysin, uterine) [Homo sapiens]
Length = 267
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 71/215 (33%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W++ + Y+ T + L AL W
Sbjct: 84 KPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRL-------VSKALNMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F + +DI + + + +D + +FD+ +
Sbjct: 137 GKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFM 167
W G G + A HE+GH+LG+ H N YP YG
Sbjct: 197 RWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNG----------------D 240
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
PQ+ + DI +QK+YG S
Sbjct: 241 PQNFKLSQ----------DDIKGIQKLYGKRSNSR 265
>gi|238797765|ref|ZP_04641259.1| RTX toxin and Ca2+-binding protein [Yersinia mollaretii ATCC 43969]
gi|238718406|gb|EEQ10228.1| RTX toxin and Ca2+-binding protein [Yersinia mollaretii ATCC 43969]
Length = 475
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 11/138 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G+ N I + + +G+D + G + + F GND +G G D
Sbjct: 143 IYGHGGNDDINGGNGWDIIKAGTGDDFISGGNGGDHLFGGEGNDAINGDDGADAIAGGMG 202
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + Y D++S D D + L + +DLI
Sbjct: 203 ADMIQ----GGNQKDYIEGNAGNDYISG-------DADNDFLFGGNNDDLIFGGDGDDLI 251
Query: 373 QVIGQDVFESMKHFYEFG 390
+ G+ + +H G
Sbjct: 252 EGDGESYYPEPEHKNNIG 269
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 9/159 (5%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWS 251
+ + IY I GDD + D G + I+ + + +
Sbjct: 137 SNQDDIIYGHGGNDDINGGNGWDIIKAGTGDDFISGGNGGDHLFGGEGNDAINGDDGADA 196
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG +M I + + G++GND + G++ N+ F + +D+ G G D
Sbjct: 197 IAGGMGADM-IQGGNQKDYIEGNAGNDYISGDADNDFLFGGNNDDLIFGGDGDDLIEGDG 255
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
SY + N + D + + F D
Sbjct: 256 ESYYPEPEHKNNIGSDHLWGNKGNDVIIPGKGKDFLDGG 294
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 19/161 (11%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G++++ E I G D++ G K+YI+ N + I G
Sbjct: 173 GNGGDHLFGGEGNDAINGDDGADAIAGGMGADMI---QGGNQKDYIEGNAGND-YISGDA 228
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIG-------------NSANNVFFESSGNDVFDGSSGL 304
N + + + G G+D++ G N ++ + + GNDV G
Sbjct: 229 DNDFLFGGNNDDLIFGGDGDDLIEGDGESYYPEPEHKNNIGSDHLWGNKGNDVIIPGKGK 288
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
D Y + A I+ + +E+ + + L
Sbjct: 289 DFLDGGEGDDHYHFSFGDGANIINEISENSNAVIFNDHLLL 329
>gi|148255566|ref|YP_001240151.1| hypothetical protein BBta_4186 [Bradyrhizobium sp. BTAi1]
gi|146407739|gb|ABQ36245.1| hypothetical protein BBta_4186 [Bradyrhizobium sp. BTAi1]
Length = 760
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G KN I +++ G GND++ G + N++ G DV +G G+DT F
Sbjct: 281 GSVKNDAIDGGAGNDTIYGGVGNDILNGQAGNDILRGGEGGDVINGGDGIDTLFGNQGGD 340
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD 340
+ + A ++ QDF
Sbjct: 341 RFVFDQAILASNTGVNSDLIQDFNRG 366
>gi|83943588|ref|ZP_00956047.1| type I secretion target repeat protein [Sulfitobacter sp. EE-36]
gi|83845820|gb|EAP83698.1| type I secretion target repeat protein [Sulfitobacter sp. EE-36]
Length = 596
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 4/128 (3%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N TI +++ G GND + G ++ G D G D S L+
Sbjct: 272 GNDTILGGEGDDTIFGQGGNDSLDGGEGDDQIEGGDGQDTITSGGGNDRAEGGQGSDLFN 331
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--NVKQRSILEYTASYEDLIQVI 375
N IV + D DV L D+ ++ + +E+ + ++
Sbjct: 332 FTSGGNHTIVGGEDADGTDV--DVLNLSGLDRSQYTLTKTGPESGTIEFRDANGNVTGTT 389
Query: 376 GQDVFESM 383
E +
Sbjct: 390 TYSEIEEV 397
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 32/97 (32%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I T +++ G++ +D + + N+ G+D DG +G D + A
Sbjct: 3 AINGTTGTDTLQGTAEDDRIDAGAGNDRVSGEGGDDRIDGGAGDDLLYGDAGVGTAPGND 62
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ Y + +D F D N
Sbjct: 63 ASPITLSYASRLFNTGNSADEGDSVFYDNVATLDNGG 99
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
I G T+ + + +GND V G ++ +G+D+ G +G
Sbjct: 4 INGTTGTDTLQGTAEDDRIDAGAGNDRVSGEGGDDRIDGGAGDDLLYGDAG 54
>gi|307592084|ref|YP_003899675.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985729|gb|ADN17609.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 720
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 66/199 (33%), Gaps = 5/199 (2%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
SY + D ND SY + ++ +D++ + Y A
Sbjct: 441 SYEANNHLVSQTIDSNNDGLAEESYSYTYDANGNRTSATTDYGNNGTADVI-ITYSYDAN 499
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYE 257
K NI DS T YD+ G+ L + S I
Sbjct: 500 KRLTSENIDSQGDGTVDSTTTYT-YDANGNLTLAVNSSQTTIQNFAYIGGGGSDLINAGA 558
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N ++ I+ + G+ GND + G S ++ +G DV G G DTF Y +
Sbjct: 559 GNDVLSGGNGIDQLFGNGGNDTIDGGSGDDSLAGGAGADVLTGGLGADTFVY--NNLTDS 616
Query: 318 IYRFENAIIVYDANEHKQD 336
+ + I N + D
Sbjct: 617 LLANYDRITDLKINSDQID 635
>gi|189067481|dbj|BAG37740.1| unnamed protein product [Homo sapiens]
Length = 471
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 28/187 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-S 77
R WS + Y+ T ++ ++ + A WS V L F +
Sbjct: 109 RTLKWSKMNLTYRIVNYTPDMTHSEV-------EKAFKKAFKVWSGVTPLNFTRLHDGIA 161
Query: 78 DIKFISS--NNGYVC---TPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI +G P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
HE GH+LGL H +P+Y G + D + + S + P D + +
Sbjct: 221 AHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPK--HP 278
Query: 181 ATPMVSD 187
TP D
Sbjct: 279 KTPDKCD 285
>gi|90406967|ref|ZP_01215158.1| putative RTX toxin [Psychromonas sp. CNPT3]
gi|90312009|gb|EAS40103.1| putative RTX toxin [Psychromonas sp. CNPT3]
Length = 3350
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 21/204 (10%)
Query: 203 GNNIY---KIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSS-IGGY 256
G++ Q IY GDDLL D G V L+ + +
Sbjct: 3109 GDDTLHGKGGNDQLDGGAGNDIIYGGAGDDLLIGDSERYGFVAGDDFLSGGEGNDQLIAG 3168
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ + + G G+DV+ G++ ++ +G DV G G D +
Sbjct: 3169 DGNDTLEGGVGNDLLQGGRGDDVLAGDAGADILIGGNGADVLTGGQGNDLLIGGTGIDTF 3228
Query: 317 KIYRFENAI-IVYDANEHKQDFL-----------SDVE---RLRFADQCIDSVNVKQRSI 361
++ ++ D N + D L +++ F +
Sbjct: 3229 VWNDGDSGTDLIQDFNVAEGDKLDLSELLHVEAGHNIDDYLNFTFDGHNTSIEIFSNGNA 3288
Query: 362 LEYTASYEDLIQVIGQDVFESMKH 385
AS + +I + D+ +
Sbjct: 3289 EHDGASADQMIILENVDLVQGQSD 3312
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 57/196 (29%), Gaps = 30/196 (15%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG----- 255
+ N Y + + I L++ LN E SSI
Sbjct: 3020 NFDNGNYSFTANNVSTDQHEKI-------LINFVDTNQNSAQTTLNIEVKSSIYNVSHTF 3072
Query: 256 ---YEKNMT--IAQHTVIESVVGSSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ N + IA ++ ++ +D + ++ GND DG +G D
Sbjct: 3073 ESELDGNFSVEIADGDY-KNSNITATDDSDHKIEAFEGDDTLHGKGGNDQLDGGAGNDII 3131
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEY 364
+ A L + DFLS E +L D +L+
Sbjct: 3132 YGGAGDDLLIGDSERYGFV------AGDDFLSGGEGNDQLIAGDGNDTLEGGVGNDLLQG 3185
Query: 365 TASYEDLIQVIGQDVF 380
+ L G D+
Sbjct: 3186 GRGDDVLAGDAGADIL 3201
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII---------VYDANEHK 334
SA+NVF + ND GSS DT + + Y I + A + + +
Sbjct: 2550 SADNVFIAAQENDAIYGSSEFDTVIFSGNASDYTINANDFATNNGHLNIVDHLGNDSSGS 2609
Query: 335 QDFLSDVERLRFADQCIDSVNVKQR 359
D L +++RL FAD
Sbjct: 2610 GDNLYNIDRLVFADGVYLVQADGSF 2634
>gi|61368429|gb|AAX43178.1| matrix metalloproteinase 7 [synthetic construct]
gi|61369114|gb|AAX43287.1| matrix metalloproteinase 7 [synthetic construct]
Length = 268
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 71/215 (33%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W++ + Y+ T + L AL W
Sbjct: 84 KPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRL-------VSKALNMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F + +DI + + + +D + +FD+ +
Sbjct: 137 GKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFM 167
W G G + A HE+GH+LG+ H N YP YG
Sbjct: 197 RWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNG----------------D 240
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
PQ+ + DI +QK+YG S
Sbjct: 241 PQNFKLSQ----------DDIKGIQKLYGKRSNSR 265
>gi|330949925|gb|EGH50185.1| putative hemolysin-type calcium-binding region [Pseudomonas syringae
Cit 7]
Length = 1610
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 45/145 (31%), Gaps = 6/145 (4%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
N + + D G+D + L + LNT + + GG
Sbjct: 1390 NSTGAANATGNALDNLIYAGAGDNVMDGRDGNDTVSY-LFATAGVTVALNTSAQQATGG- 1447
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
T+ E+++GS D + GN N GND G +G D + +
Sbjct: 1448 SGLDTLKFT---ENLIGSQFADTLTGNKNANTLSGGDGNDTLSGGAGDDVLIGGSGADTL 1504
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV 341
+ + + L D+
Sbjct: 1505 IGGTGADHYVFNSITDTGLGGLRDI 1529
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 47/134 (35%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 327 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G + +++ +G D G + DTF + +
Sbjct: 387 TEANDVITGGAAHEQIFGLAGKDTLNGGAGDDILIGGAGADKLTGGASADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD 329
Y+ + +V D
Sbjct: 447 YRTATTSSTDLVTD 460
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 232 DLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D T ++ I++ + ++ G E + ++++G G+D + G++ ++
Sbjct: 772 DATGASVADSFAINVGNVTPGTLTGTENAEALYGTEGNDTILGLGGDDTLRGDTGADIIN 831
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D G + DTF Y A + Y+ Y A + DF +++ +
Sbjct: 832 GGAGRDALYGGADADTFVYSALTDSYRDYDAGG----LTATDTIYDFTPGQDKIDVSALG 887
Query: 351 IDSVNVKQRSILE 363
+ + L
Sbjct: 888 FLGLGNGEDHTLY 900
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 534 VEGTAGGDTLTGTDGNDVINGNAGTDRIDGGAGADTITGGADADTLTGGAGADLFIYNSR 593
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y+ Y ++ DF +R+ + + + + + Y + D
Sbjct: 594 LDSYRNYTASG----TKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 71/196 (36%), Gaps = 13/196 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ ++ Q D G D D+ ++ + + + +S S +
Sbjct: 1226 GHIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDT 1285
Query: 256 YEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ +E+ + +GN +V+IGN++NN+ ++G D+ G G D
Sbjct: 1286 VVSSVSWTLGANLENLVLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSD 1345
Query: 306 TFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+++ + + + ++ ++VE + + L
Sbjct: 1346 SYYVDDAADRVVETNADAQVGGVDTVYSSLASYTLGANVENIVINSTGAANATGNALDNL 1405
Query: 363 EYTASYEDLIQVIGQD 378
Y + ++++ +
Sbjct: 1406 IYAGAGDNVMDGRDGN 1421
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 1227 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFES 382
+ +++E L + +++ AS L G D+
Sbjct: 1287 VSSVSWTLGANLENLVLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTG 1340
>gi|291569343|dbj|BAI91615.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 498
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N TI +++ G ND++ + NN+ F + GND G G D+ + A
Sbjct: 63 IYGNQGNDTIIGGDGSDTIFGGQDNDLLEAGNGNNILFGNLGNDTLIGGPGNDSLYGGAG 122
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + I N+II + + D L+
Sbjct: 123 NDVI-IGGPGNSII---SGDKGLDTLTG 146
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 19/183 (10%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ + IY + G+D + IGG + +I G + N + + G+
Sbjct: 56 NDNNAKIIYGNQGNDTI----IGGDGSD---------TIFGGQDNDLLEAGNGNNILFGN 102
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND +IG N+ + +GNDV G G N I+ + +
Sbjct: 103 LGNDTLIGGPGNDSLYGGAGNDVIIGGPGNSIISGDKGLDTLTGGNGANQFILQSSGADR 162
Query: 335 ---QDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM--KHFYE 388
DF S ++++R + + V+ +++ ++ + S+ F
Sbjct: 163 DVITDFKSGIDKMRLPTGLTFNDLEVRGAGANTEIVRNGEVVAILNDVMSSSINSNDFIT 222
Query: 389 FGL 391
G
Sbjct: 223 AGQ 225
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 3/153 (1%)
Query: 231 LDLTLIGGVKNYI---DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
LDL + NYI L + IA + +V + ++ GN N+
Sbjct: 11 LDLGIATPGNNYIIVSQLPPGQIAHFSASPFQNAIALLEGDDYLVNDNNAKIIYGNQGND 70
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G+D G D + + + +I N+ + +
Sbjct: 71 TIIGGDGSDTIFGGQDNDLLEAGNGNNILFGNLGNDTLIGGPGNDSLYGGAGNDVIIGGP 130
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I S + ++ + + ++Q G D
Sbjct: 131 GNSIISGDKGLDTLTGGNGANQFILQSSGADRD 163
>gi|229515016|ref|ZP_04404476.1| hypothetical protein VCB_002669 [Vibrio cholerae TMA 21]
gi|229347721|gb|EEO12680.1| hypothetical protein VCB_002669 [Vibrio cholerae TMA 21]
Length = 4190
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 74/225 (32%), Gaps = 33/225 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----DLNTESW 250
G P+ LG Y S +T+ + G D ++ D T +
Sbjct: 3365 GTPQHLLGGKNYFGWENIDSSYIKETL--TQGVDNPNVLHTNQSNAIRGMWGSDNITTHF 3422
Query: 251 SSIGG-YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S + I ++ + S ND + G S N++ G+D G G+DT Y
Sbjct: 3423 SQFDQILAGDDGILGNS--DGTNASQVNDTLTGGSGNDILIGEQGDDTLYGGDGVDTAVY 3480
Query: 310 YAPSYLYKIYRFENAI-----------IVYDANE---HKQDFLSDVERLRFADQCIDSVN 355
Y I + + +V AN D L +ERL+FAD
Sbjct: 3481 AKNFSDYTIGQVKFDGGNTPNFQVKDKLVTVANPYAGEGTDQLYSIERLQFADGTYYFDR 3540
Query: 356 V------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+Q A DL G + S++ GL EG
Sbjct: 3541 NKGEWVKEQSYTEYKLAITVDLTDTDGSESIMSVEL---SGLIEG 3582
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-V 327
++++G +GND++ G N+ G D G SG D + + ++ V
Sbjct: 4042 DTLIGGAGNDILFGQGGNDSLDGGVGKDTLYGGSGNDILIGGLGNDILTGGSGDDLFKWV 4101
Query: 328 YDANEHKQDFLSDVE 342
+ D ++D
Sbjct: 4102 VGDLDGSTDRITDFH 4116
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---FY 309
IGG ++ Q +S+ G G D + G S N++ GND+ G SG D F
Sbjct: 4045 IGGAGNDILFGQG-GNDSLDGGVGKDTLYGGSGNDILIGGLGNDILTGGSGDDLFKWVVG 4103
Query: 310 YAPSYLYKIYRF 321
+I F
Sbjct: 4104 DLDGSTDRITDF 4115
Score = 44.0 bits (102), Expect = 0.090, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TLIGG N I S+ G T+ + + ++G GND++ G S +++F
Sbjct: 4041 DDTLIGGAGNDILFGQGGNDSLDGGVGKDTLYGGSGNDILIGGLGNDILTGGSGDDLFKW 4100
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+ DGS+ D + S KI + + D + + L++++ D
Sbjct: 4101 VVGD--LDGST--DRITDFHLSENDKIDLSDLFVNPSD--QDVMELLANIKLTVQGDDHS 4154
Query: 352 DSVNVKQRS 360
S VKQ +
Sbjct: 4155 SSFTVKQGN 4163
>gi|212633886|ref|YP_002310411.1| hemolysin-type calcium binding protein [Shewanella piezotolerans
WP3]
gi|212555370|gb|ACJ27824.1| Hemolysin-type calcium binding protein [Shewanella piezotolerans
WP3]
Length = 1338
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 9/139 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
V + I +G D D G ++ I+ + +I N TI
Sbjct: 610 GDSVTNVTINAPEVIVTAGSGD--DHVTTGSGEDLIEAGNGND-TINSGSGNDTIYGGAG 666
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRF 321
+++ +G+D+ G + +V +GND G +G DT A +
Sbjct: 667 NDTINTGAGDDIAYGAAGEDVINSGAGNDTIYGGAGNDTINTGAGDDKAYGGAGDDMLTN 726
Query: 322 ENAIIVYDANEHKQDFLSD 340
A E D L+
Sbjct: 727 TGAGDTALYGEEGHDTLTG 745
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 20/179 (11%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D +I I L +S +++ + + + + V SG D++ + N+
Sbjct: 593 YTDALVINRDAPVILLAGDSVTNVTINAPEVIVTAGSGDDHVTTGSGEDLIEAGNGNDTI 652
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
SGND G +G DT A + + A + D + +
Sbjct: 653 NSGSGNDTIYGGAGNDTINTGAGDDI----AYGAAGEDVINSGAGNDTI-------YGGA 701
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
D++N Y + +D++ G EG D + Y +
Sbjct: 702 GNDTINTGAGDDKAYGGAGDDMLTNTGAGDTALYG-------EEGHDTL--TGYYRANN 751
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 80/240 (33%), Gaps = 26/240 (10%)
Query: 199 KGSLGNNI-YKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G++I Y + TIY G+D + D GG + + NT +
Sbjct: 671 NTGAGDDIAYGAAGEDVINSGAGNDTIYGGAGNDTINTGAGDDKAYGGAGDDMLTNTGAG 730
Query: 251 -SSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNV-------FFESSGNDVFDGS 301
+++ G E + T+ + + + G GND + NS ++ G+D F
Sbjct: 731 DTALYGEEGHDTLTGYYRANNTLDGGEGNDTLTMNSISSSYRDSSNSLRGGRGDDSFTMG 790
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G DT+ Y + + R + D +H++D L + A + V+ S
Sbjct: 791 YGSDTYHYDLG-DGHDVIRDKGYDSSQDETKHRRDTL-----VLGAGITREMVSFTHDSA 844
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLS-EGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ D M + EG I F S D + + G
Sbjct: 845 GNIIITITDPDNAANNGSIMVMGAYTSSTYRIEG--IEFSGDESGASNLDEAAILAAAEG 902
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G+ G+D + G S + + GNDV SG D + A + A
Sbjct: 901 EGMFGTDGDDALTGTSMSETLYGGEGNDVIHTGSGEDIAYGGADNDTLT---NTGAGDTA 957
Query: 329 DANEHKQDFLSD 340
E D L+
Sbjct: 958 LYGEEGHDTLTG 969
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + + ++ E++ G GNDV+ S ++ + + ND + DT Y
Sbjct: 902 GMFGTDGDDALTGTSMSETLYGGEGNDVIHTGSGEDIAYGGADNDTLTNTGAGDTALYGE 961
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ + + D L+
Sbjct: 962 EGHDTLTGYYRANNTLDGG--EGNDTLT 987
Score = 42.0 bits (97), Expect = 0.37, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 30/216 (13%)
Query: 136 HPGSYNGGYPVYGVDNDYENDSFL----TSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
H + N + DN N S + + +Y + G + + A+
Sbjct: 1065 HDSAGNIIITITDPDNAANNGSIMVMGAYTSSTYRIEGIEFSGDESGASNLDEAAILAAL 1124
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
++++G + G+++ + + IY G D L
Sbjct: 1125 EEMHG----TEGSDV------IQGTSTADIIYGENGGDTLYGRKGADK------------ 1162
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + + ++G SG+D +IG + G+D GS+G DT+ + +
Sbjct: 1163 -LFGGSGDDKLVGGGGKDLLIGGSGDDQLIGGGGGDTLNGGEGSDNLKGSAGNDTYLFSS 1221
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
I +++ D +E L F+
Sbjct: 1222 DFGNDVINNYDSNSSSIDTAIFND---VSIEELWFS 1254
>gi|149633277|ref|XP_001509994.1| PREDICTED: similar to matrix metallopeptidase 8 (neutrophil
collagenase) [Ornithorhynchus anatinus]
Length = 629
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 59/183 (32%), Gaps = 42/183 (22%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFIS---- 83
++K + LT L++ + E + A WS LTF + + +DI
Sbjct: 105 KWKSNALTYRILNYISDMSQADTDEAFKKAFQLWSNASPLTFSKINEGDADIMIYFARRD 164
Query: 84 -SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+N P + +FD + W G KG L A HE GH+LGL
Sbjct: 165 HGDNSPFDGPNNILAHAFQPGRGIGGDAHFDADETWTKG-SKGYNLFLVAAHEFGHSLGL 223
Query: 135 MHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H +P Y F + + DI +Q
Sbjct: 224 SHSTEPGALMFPTYA-----------------FSDPKTFSLSQ---------DDINGIQS 257
Query: 194 IYG 196
IYG
Sbjct: 258 IYG 260
>gi|33863557|ref|NP_895117.1| hypthetical protein [Prochlorococcus marinus str. MIT 9313]
gi|33641006|emb|CAE21464.1| hypthetical protein [Prochlorococcus marinus str. MIT 9313]
Length = 354
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 27/176 (15%)
Query: 66 VDLTFEETSIHS----DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DL F +S DI +S ++G+ T + + D+ G
Sbjct: 69 IDLDFTRVYTYSGSDLDIYNLSGHSGWRDTYVGMTWTMGYGAYSWFDIAWLYTGDWEFDR 128
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ +HEIGH+LGL HPG NG P Y D+ +VMSY + G+
Sbjct: 129 NTIIHEIGHSLGLDHPGD-NGYNPAYNSDD---------TVMSYNEGLN-------GWSV 171
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
SDI A+ I+G + Y + +P +++ GG L +L G
Sbjct: 172 DWTQSDIDALVSIWGRE------DDYDYLDEPISNPLAGVLFEEGGVYRLYNSLTG 221
>gi|159044444|ref|YP_001533238.1| hypothetical protein Dshi_1895 [Dinoroseobacter shibae DFL 12]
gi|157912204|gb|ABV93637.1| hypothetical protein Dshi_1895 [Dinoroseobacter shibae DFL 12]
Length = 850
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 57/190 (30%), Gaps = 15/190 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL---------DLTLIGGVKNYIDLNTESWSSIG 254
+ IY + + + YD+ G D L GG + + S+
Sbjct: 533 DAIYGGAGPNSTATMV-SRYDADGTRYDPFGNVLPEDDDRLFGGEGDDYLSGSAGHDSLH 591
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ T +++ G SG+D++ G S + +G D +G SG D +
Sbjct: 592 GGVGNDTLDGGTGFDTLFGDSGDDILSGGSDQDTLHGGAGADALNGGSGHDVLHGDDGAD 651
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ D + L + L A + +
Sbjct: 652 N---LIGGSGDDTLHGGAGADDLRGGPGADILHGDGGDDRLDGGTEDDRLYGGAGDDYVK 708
Query: 373 QVIGQDVFES 382
G D+
Sbjct: 709 GAAGDDLLSG 718
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 57/200 (28%), Gaps = 32/200 (16%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVI 268
T++ GDD+L G + L+ + + + G + +
Sbjct: 596 NDTLDGGTGFDTLFGDSGDDIL-----SGGSDQDTLHGGAGADALNGGSGHDVLHGDDGA 650
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
++++G SG+D + G + + G +D G +G D
Sbjct: 651 DNLIGGSGDDTLHGGAGADDLRGGPGADILHGDGGDDRLDGGTEDDRLYGGAGDDYVKGA 710
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A L ++ ++ Y + A I + + +D
Sbjct: 711 AGDDLLSGGDGKDKLMGYSGADVLDGGAGADRLYLGAGADIATGGTGSD---RFIFRADD 767
Query: 371 LIQVIGQDVFESMKHFYEFG 390
L + + F G
Sbjct: 768 L-----DGSTDRITDFRNAG 782
>gi|15800218|ref|NP_286230.1| RTX family exoprotein [Escherichia coli O157:H7 EDL933]
gi|12513368|gb|AAG54838.1|AE005229_1 putative RTX family exoprotein [Escherichia coli O157:H7 str. EDL933]
Length = 5188
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 4964 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 5017
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 5018 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 5077
Query: 319 YRFENAII 326
+ ++
Sbjct: 5078 GGNGSDVV 5085
>gi|227822864|ref|YP_002826836.1| hypothetical protein NGR_c23240 [Sinorhizobium fredii NGR234]
gi|227341865|gb|ACP26083.1| hypothetical protein NGR_c23240 [Sinorhizobium fredii NGR234]
Length = 1049
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 13/173 (7%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
+ D G + D K+YG GN+ + + + + G
Sbjct: 805 GNGGNDTLRGGAGNDRLEDGAGNDKLYG----DAGNDT----LIRTNEIGTDSFDGGAGT 856
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + + +DL + + GG K +T+ T IE V GSS +D + G SAN
Sbjct: 857 DTLKFSFDSSMSVKLDLANNA--NNGGMAKGLTV---TGIEVVYGSSQDDDIRGTSANEK 911
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
FF +D G +G D A L + ++ + + D + D
Sbjct: 912 FFGGGADDFLFGGAGDDVLEGGAAGDLLQGGTGKDQFVFHSDGFGTGDQIVDF 964
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 77/246 (31%), Gaps = 54/246 (21%)
Query: 193 KIYGAPKGSL-----GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-------TLIGGVK 240
++YG GN+ + + +Y G+D L + G +
Sbjct: 689 RLYGGAGADRLEGGDGNDTLQATYSTQFDTQADKLYGGAGNDSLRINQGDFADAGTGTDR 748
Query: 241 NYIDLNTES------WSS------------------IGGYEKNMTIAQHTVIESVVGSSG 276
Y+DL ++ +S+ G N ++ + + + G+ G
Sbjct: 749 VYVDLANQATGVSFVFSNGTVTVNAATKFTGAESLEFYGTSGNDSVTAGALNDVLKGNGG 808
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-----------YYAPSYLYKIYRFENAI 325
ND + G + N+ + +GND G +G DT A + K +
Sbjct: 809 NDTLRGGAGNDRLEDGAGNDKLYGDAGNDTLIRTNEIGTDSFDGGAGTDTLKFSFDSSMS 868
Query: 326 IVYDANEHKQD-------FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D + + ++ +E + + Q D + + L G D
Sbjct: 869 VKLDLANNANNGGMAKGLTVTGIEVVYGSSQDDDIRGTSANEKFFGGGADDFLFGGAGDD 928
Query: 379 VFESMK 384
V E
Sbjct: 929 VLEGGA 934
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 2/146 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G + + ++D+ T SG L+ + ++ S S
Sbjct: 450 GKDTIRAGAGTDTVTIVRRDATTNLTFSISGVTGTLNDGTSVTDAEHYAIHAGSGSDTLT 509
Query: 256 YEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+++ + + G G+D + G + N+ GND G +T +
Sbjct: 510 AGAALSVKFYGANGNDRLTGGKGSDWLDGGAGNDTLKGGDGNDRIIDDGGANTIDAGTGN 569
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS 339
L ++ D ++
Sbjct: 570 DLVELEIASGTAANSILLGTGNDTVT 595
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 8/138 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N + +++ G G D++ G ++ +G+D+ G G DT
Sbjct: 190 TITGGRWNDFLNGGDGNDTLNGGIGRDMLDGADGDDTLNGGNGSDILSGDIGADTIRGGY 249
Query: 312 PSYLYKIYR-----FENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEY 364
+ + F A + + D LS D + + D + ++ + L+
Sbjct: 250 GNDMGDGGVGDDKLFGEAGNDHLTGANGADALSGGDGDDTLYGDVAFNLIHSGNDT-LDG 308
Query: 365 TASYEDLIQVIGQDVFES 382
+ + L +G D
Sbjct: 309 GSGNDFLNGGLGLDTITG 326
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 57/205 (27%), Gaps = 13/205 (6%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTE--SWSSIG 254
G+ + + E D + D G G D L L+ + + S++
Sbjct: 114 NAGTGDDMVMAFEPADSDGD----VVDGGLGFDTLALSFTDQTTALTFAAPDPIAQSNLA 169
Query: 255 GYEK-----NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G K I +++ G ND + G N+ G D+ DG+ G DT
Sbjct: 170 GGIKVTNVEQFMIVGTDFADTITGGRWNDFLNGGDGNDTLNGGIGRDMLDGADGDDTLNG 229
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S + I D ++L L +
Sbjct: 230 GNGSDILS-GDIGADTIRGGYGNDMGDGGVGDDKLFGEAGNDHLTGANGADALSGGDGDD 288
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEG 394
L + ++ S + G
Sbjct: 289 TLYGDVAFNLIHSGNDTLDGGSGND 313
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 60/236 (25%), Gaps = 38/236 (16%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G + I + TI G D ++ + +L+ +
Sbjct: 311 GNDFLNGGLGLDTITGGDGNDRVGVTI--GHGRDTINGGAGTDILEVQNLSGTFTAKASN 368
Query: 256 YEKNMTIA---------------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD- 299
++ + +++ GND + + N+ GND D
Sbjct: 369 LSNTLSDGTTFINMEAYSFDSGMGSSTVDNWTTGDGNDTMRSHDGNDTLSSGKGNDSIDS 428
Query: 300 ------------------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G+ G DT A + I R + + + L+D
Sbjct: 429 GNGVDIVNSGDGNDTITVGNGGKDTIRAGAGTDTVTIVRRDATTNLTFSISGVTGTLNDG 488
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHFYEFGLSEGR 395
+ A+ ++ A G D + + G
Sbjct: 489 TSVTDAEHYAIHAGSGSDTLTAGAALSVKFYGANGNDRLTGGKGSDWLDGGAGNDT 544
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 20/160 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIG 254
GA G +E++ +I G+D + + G ++ + +
Sbjct: 559 GANTIDAGTGNDLVELEIASGTAANSILLGTGNDTVTINAFRGLTAGKFTVDGGTGTDTA 618
Query: 255 GYEKNMTIA--------------QHTVIESV-----VGSSGNDVVIGNSANNVFFESSGN 295
++M A + +V SG D + G++ +++F GN
Sbjct: 619 AVNRSMGTANMSFVLSPSAVLTNGDVTLRNVEAVQIWTGSGTDSLTGSALSDLFHGGGGN 678
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D G +G D + A + + + + + +
Sbjct: 679 DTLKGLAGNDRLYGGAGADRLEGGDGNDTLQATYSTQFDT 718
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG++ + T G + L T++ ++ G I + + G ND + G+
Sbjct: 33 GGNEAM-ATNPGTDQQDFILGTDAVDTLSGGFSTDQIFGLAGNDILSGGFQNDTINGDVG 91
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ SG+D G +G D+ A + + FE A D + F D L
Sbjct: 92 NDAISGGSGSDNIQGGAGADSI--NAGTGDDMVMAFEPADSDGDVVDGGLGF--DTLALS 147
Query: 346 FADQCIDSVNVKQRSI 361
F DQ I
Sbjct: 148 FTDQTTALTFAAPDPI 163
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 33/133 (24%), Gaps = 2/133 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + T+ + SGND + G S N+ G D G G D
Sbjct: 281 LSGGDGDDTLYGDVAFNLIH--SGNDTLDGGSGNDFLNGGLGLDTITGGDGNDRVGVTIG 338
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I I+ N +N++ S S
Sbjct: 339 HGRDTINGGAGTDILEVQNLSGTFTAKASNLSNTLSDGTTFINMEAYSFDSGMGSSTVDN 398
Query: 373 QVIGQDVFESMKH 385
G H
Sbjct: 399 WTTGDGNDTMRSH 411
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 16/181 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN----MTI 262
Y + + + + GG + TL GG N ++ ++I N + I
Sbjct: 519 YGANGNDRLTGGKGSDWLDGGA--GNDTLKGGDGNDRIIDDGGANTIDAGTGNDLVELEI 576
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFE-SSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
A T S++ +GND V N+ F ++G DG +G DT A +
Sbjct: 577 ASGTAANSILLGTGNDTVTINA----FRGLTAGKFTVDGGTGTDTA---AVNRSMGTANM 629
Query: 322 ENAIIVYDANEHKQDFLSDVERLRF--ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + L +VE ++ + + L + G D
Sbjct: 630 SFVLSPSAVLTNGDVTLRNVEAVQIWTGSGTDSLTGSALSDLFHGGGGNDTLKGLAGNDR 689
Query: 380 F 380
Sbjct: 690 L 690
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 60/221 (27%), Gaps = 39/221 (17%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDL 245
DI+ VQ + G N + +DSG G +D G + +
Sbjct: 351 DILEVQNLSGTFTAKASNLSNTLSDGTTFINMEAYSFDSGMGSSTVDNWTTGDGNDTMRS 410
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI-GNSANNVFFESSGNDV------- 297
+ + ++ + N +I ++ V GND + GN + +G D
Sbjct: 411 HDGND-TLSSGKGNDSIDSGNGVDIVNSGDGNDTITVGNGGKDTIRAGAGTDTVTIVRRD 469
Query: 298 -----------------------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
SG DT A + N +
Sbjct: 470 ATTNLTFSISGVTGTLNDGTSVTDAEHYAIHAGSGSDTLTAGAALSVKFYGANGNDRLTG 529
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
D + + L+ D ++ + ++ +
Sbjct: 530 GKGSDWLDGGAGNDTLKGGDGNDRIIDDGGANTIDAGTGND 570
>gi|329851855|ref|ZP_08266536.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328839704|gb|EGF89277.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1261
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 73/219 (33%), Gaps = 20/219 (9%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ +Y + G+D + + +G S S G
Sbjct: 22 GTAGDYLYGGTGNDLLNGGAGSDNLIGDSGNDTV--SYVGAASGITVSIAISTSQNTGGS 79
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
T+ + E+V GS+ D + G+S N+ +GND G+ G DT+ + S +
Sbjct: 80 GFDTL---SGFENVTGSAYADSLTGSSGGNIIDGGAGNDTLAGAQGNDTYVVDSGSDVLV 136
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR---------SILEYTASY 368
+V ++VE L ++ ++L+ A
Sbjct: 137 EAAASGTDVVQAFASF--TLNANVENLVLLGASLNGTGNSLDNTITGNTSHNLLDGGAGN 194
Query: 369 EDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYL 405
+ L +G D ++ EG D S Y+
Sbjct: 195 DTLSGGLGDDSYVVDAAGDVVTESGGEGTDTVSSSVTYV 233
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 11/145 (7%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ--- 335
+ G +A + + +GND+ +G +G D + + + I V A Q
Sbjct: 18 TLTGGTAGDYLYGGTGNDLLNGGAGSDNLIGDSGNDTVSYVGAASGITVSIAISTSQNTG 77
Query: 336 ----DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEF 389
D LS E + + +I++ A + L G D V +S
Sbjct: 78 GSGFDTLSGFENVTGSAYADSLTGSSGGNIIDGGAGNDTLAGAQGNDTYVVDSGSDVLVE 137
Query: 390 GLSEGRDIT--FDSYLYLGSYDDLR 412
+ G D+ F S+ + ++L
Sbjct: 138 AAASGTDVVQAFASFTLNANVENLV 162
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 14/147 (9%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S + + GN+ N+ GND G +G DTF + + E IV
Sbjct: 909 NATGNSLANTLNGNAGANLLDGGGGNDTLSGGAGNDTFIVNVTADVAIEAFGEGTDIVQS 968
Query: 330 ANEHKQDFLSDVERLRFA----------DQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+++E L D + L+ A + ++ G D
Sbjct: 969 LATFTLG--ANIENLVLTGIANINGTGNDLNNSLTGTIGNNALDGGAGVDTMVGGQGNDT 1026
Query: 380 --FESMKHFYEFGLSEGRDITFDSYLY 404
+ EG D+ + S Y
Sbjct: 1027 YYVDIASDAITEAAGEGTDLVYASVTY 1053
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 63/163 (38%), Gaps = 12/163 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G +N+T+ T + G++ N+ + GNS NNV ++GND G G D+++ +
Sbjct: 729 LGANIENLTL-TGTGAINGTGNALNNNLTGNSGNNVLNGAAGNDTLTGGLGNDSYYVDSA 787
Query: 313 SYLYKIYRFENAIIVYDANEHKQD-------FLSDVERLRFADQCIDSVNVKQR--SILE 363
S + ++ + + L+ + L + ++L+
Sbjct: 788 SDVVVEVASGGTDLILSSVHYSLAGIVVENLTLTGADDLNGTGNGSGNALTGNSGNNVLD 847
Query: 364 YTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
+ + + +G D ++ EG D+ F S Y
Sbjct: 848 GGLANDTMAGGLGNDTYYVQATGDNVVEANGEGSDVIFSSVTY 890
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 80/228 (35%), Gaps = 24/228 (10%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
G+ G+N + + +++ S G+D D+ + +
Sbjct: 504 TGNSGDNSVVGNIGNNRLDGAEGNNSLFGSAGNDTYVVATVNDIVAEAPGDGTDTVESTI 563
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S+ +N+++ + I + G+SG ++++GNS NNV +G+D G G DTF
Sbjct: 564 SYSLAADLENLSLMETADI-NGTGNSGTNLIVGNSGNNVLDGGAGDDSLAGGLGNDTFIV 622
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASY 368
A + E V + + VE L + + +IL +
Sbjct: 623 EASGDVVTEASSEGTDEVQSSITYVLGD--HVENLSLTGGASINGSGNSLINILTGNSGN 680
Query: 369 EDLIQVIGQDVFES-----------MKHFYEFGLSEGRDITFDSYLYL 405
L +G D + GL EG DI S ++
Sbjct: 681 NILTGGLGADSMAGGLGNDTFVVEDIGDVVTEGLDEGTDIVLASATFI 728
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 13/171 (7%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A GN+ + + + G D + + G Y+D+ +++ + G
Sbjct: 987 ANINGTGND---LNNSLTGTIGNNALDGGAGVDTM-VGGQGNDTYYVDIASDAITEAAGE 1042
Query: 257 EKNMTIA------QHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ A V+E++ + N GN+ N +SGN+ DG +G DT
Sbjct: 1043 GTDLVYASVTYSLAGKVVENLTMTGTANLSATGNTLGNKLNGNSGNNSLDGGAGNDTLMG 1102
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ Y + + ++ + N D + + +++ +
Sbjct: 1103 GLGNDTYYVTSTGDKVV--ENNGEGTDIIYSTVTYTLTGRYAETLELTGSG 1151
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 11/165 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G +N+T+ + I + G+ G++VV GNS NN+ GND +G G DTFF A
Sbjct: 324 LGSNLENLTLTGNANI-NGTGNVGDNVVFGNSGNNMLDGGDGNDTLNGGLGDDTFFINAI 382
Query: 313 SYLYKIYRFENAIIVYDANEHKQD------FLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + V L+ + ++V +
Sbjct: 383 GDVVAETASAGSDEVRSLVSWTLAVDLENLTLTGSANISGTGNVANNVIIGNSGNNLLDG 442
Query: 367 SYEDLIQVIGQD----VFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D G + ++ ++EG D+ S Y+ S
Sbjct: 443 GGGDDSLNAGLGDDSYIVDAAGDLVTEAVAEGTDLVVASTSYVLS 487
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 10/137 (7%)
Query: 197 APKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIG-------GVKNYIDLNT 247
A +LGN + T+ G+D +T G G I +T
Sbjct: 1073 ATGNTLGNKLNGNSGNNSLDGGAGNDTLMGGLGNDTYYVTSTGDKVVENNGEGTDIIYST 1132
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+++ G Y + + + +++ GN +IGN+ NN GND+ G G D F
Sbjct: 1133 VTYTLTGRYAETLELTGSGNVDASGNGVGN-TLIGNTGNNTLNGLGGNDILTGGLGADVF 1191
Query: 308 FYYAPSYLYKIYRFENA 324
+ S + F A
Sbjct: 1192 LFGIASRADTVTDFSAA 1208
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 61/172 (35%), Gaps = 10/172 (5%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL S S + T G+SG++ V+GN NN + GN+ GS+G
Sbjct: 476 DLVVASTSYVLSANIENLTLGGTGNIDGTGNSGDNSVVGNIGNNRLDGAEGNNSLFGSAG 535
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFAD-------QCIDSVN 355
DT+ + + + V + L ++ + AD V
Sbjct: 536 NDTYVVATVNDIVAEAPGDGTDTVESTISYSLAADLENLSLMETADINGTGNSGTNLIVG 595
Query: 356 VKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYL 405
++L+ A + L +G D + E+ SEG D S Y+
Sbjct: 596 NSGNNVLDGGAGDDSLAGGLGNDTFIVEASGDVVTEASSEGTDEVQSSITYV 647
>gi|294013166|ref|YP_003546626.1| putative Ca2+-binding hemolysin [Sphingobium japonicum UT26S]
gi|292676496|dbj|BAI98014.1| putative Ca2+-binding hemolysin [Sphingobium japonicum UT26S]
Length = 4159
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 60/194 (30%), Gaps = 16/194 (8%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T++D L+ + ++S SI G N I + + GS GND++
Sbjct: 2229 TVWDRDKIIEQLLSQPATPYADYLVGSDSADSIDGLAGNDFIEGGKGNDILAGSDGNDIL 2288
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY----------RFENAIIVYDA 330
G N+V + G+D+ G G+DT A I+
Sbjct: 2289 FGGIGNDVLYGGEGDDILSGDQGVDTLDGGNGFDTADYSFSLDSWNIDLAAGTASIIQST 2348
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L +E + + + A + L G DV F G
Sbjct: 2349 GTAPTETLISIESVVGGLGSDRIKGSDVANRIRGGAGNDILEGRGGDDV------FIVEG 2402
Query: 391 LSEGRDITFDSYLY 404
EG D Y
Sbjct: 2403 DEEGIDTIDGGEGY 2416
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ +++ + G + IA +++ G +GND + G + ++ SG+D G +G
Sbjct: 1389 VRGTAFNDTLSGMGGDDEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGSGDDWLSGGAG 1448
Query: 304 LDTFFYYAPSYLYKIYRFENAIIV 327
DT+ + + V
Sbjct: 1449 NDTYLFNLGDGWDVLQDSSGTDTV 1472
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ +++ + G + IA +++ G +GND + G + ++ SG+D G +G
Sbjct: 1551 VRGTAFNDTLSGMGGDDEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGSGDDWLSGGAG 1610
Query: 304 LDTFFYYAPSYLYKIYRFENAIIV 327
DT+ + + V
Sbjct: 1611 NDTYLFNLGDGWDVLQDSSGTDTV 1634
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ ++I G N T+ + + G GND + G + N+ +G+D+ G G D
Sbjct: 1223 TLNNIQGTASNNTLLGMGGDDEISGLDGNDTLDGGAGNDRLDGGNGDDILSGGLGDDWLS 1282
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
A + Y + ++ D++ D + + D + V
Sbjct: 1283 GGAGNDTYLFNLGDGWDVLQDSS--GTDTVRFAAGISAGDIRLSQVRQDGD 1331
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T++D ++ ++ N I T S +++ G + I+ +++ G +GND +
Sbjct: 1208 TVWDRA---TINSQVVVVTLNNIQ-GTASNNTLLGMGGDDEISGLDGNDTLDGGAGNDRL 1263
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G + +++ G+D G +G DT+ + + V
Sbjct: 1264 DGGNGDDILSGGLGDDWLSGGAGNDTYLFNLGDGWDVLQDSSGTDTV 1310
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND + G + N+ +G+D G SG D A + Y + ++
Sbjct: 1405 DEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGSGDDWLSGGAGNDTYLFNLGDGWDVLQ 1464
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
D++ D + + D + V
Sbjct: 1465 DSS--GTDTVRFAAGISAGDIRLSQVRQDGD 1493
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND + G + N+ +G+D G SG D A + Y + ++
Sbjct: 1567 DEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGSGDDWLSGGAGNDTYLFNLGDGWDVLQ 1626
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
D++ D + + D + V
Sbjct: 1627 DSS--GTDTVRFAAGISAGDIRLSQVRQDGD 1655
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 10/134 (7%)
Query: 222 IYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
++ GG+DLL D G + +D S + + E N + + + S
Sbjct: 267 LFGDGGNDLLVGGKLDDWLFGGAGDDVLDAGGGSGNVLIAGEGNDRLVGSNGVSADPMDS 326
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D ++G N+ + G+D F+G G D S + + D +
Sbjct: 327 GSDWLLGGLGNDRLYGLGGDDYFEGGQGSDFIEGGKGSDTIIFRAGDGTDRISDIGTDEG 386
Query: 336 DFLSDVERLRFADQ 349
D ++ ++F D
Sbjct: 387 D----IDVIQFGDG 396
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 3/123 (2%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
DL +S + I + T +++ G G+D + G N+ G+D +G +
Sbjct: 1696 DLRQHLYSQV--LTAGDDIVRGTAFNDTLSGMGGDDEIAGLDGNDTLDGGKGSDRLEGGN 1753
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D + + I+ + V L + + D ++ +K +
Sbjct: 1754 GNDIYIFNRGDGRDAIWDSGGSDTVRFGAGIAPGDLEFTQAQQDGDSNGLTLAIKGTADQ 1813
Query: 363 EYT 365
Y
Sbjct: 1814 LYI 1816
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G GND + G + N F G+D G++G DT+ Y + I+ + D
Sbjct: 3316 RGGDGNDSLSGYATANTFEGGKGDDYLVGAAGDDTYVYRSGDGSDHIWDYNAGASDTDTL 3375
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSI---LEYTASYEDLIQVI 375
+ SDVE R D + I + + D+++ I
Sbjct: 3376 KLVDLNPSDVELRRSGDHLYVKDLTTGQEIWIEYHFYSDSRDVVERI 3422
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 58/185 (31%), Gaps = 26/185 (14%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---------GVKNYI-DLNTES--- 249
GN+ Y + + D L L + G + YI DL T
Sbjct: 2967 GNDTYVYASGDGNDHIVDYNGGVADSDTLKLVNLNPGDVELRRWGDQLYIKDLTTGQEIW 3026
Query: 250 -----WSSIGGYEKNMTIAQHTVIESVV--------GSSGNDVVIGNSANNVFFESSGND 296
SS +N+ A TV G++G + + G+ A + G+D
Sbjct: 3027 VEIQFHSSGSYAVENIQFADGTVWNLARIQQEAWIRGTAGAETIDGSGAADTIVGKQGDD 3086
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G DT+ Y + I + + D + DVE R DQ
Sbjct: 3087 FLRGGQGNDTYVYASGDGNDHIVDYNGGVTDSDTLKLVNLNPGDVELRRSGDQLYVKDLT 3146
Query: 357 KQRSI 361
+ I
Sbjct: 3147 TGQQI 3151
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 27/173 (15%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ D+ GY + GA G++ Y +
Sbjct: 3314 WFRGGDGNDSLSGYATANTFEGGKGDDYLVGA----AGDDTYVYRSGDGSDHIWDYNAGA 3369
Query: 226 GGDDLLDLTLIGGVKNYI----------DLNTES--------WSSIGGYEKNMTIAQHTV 267
D L L + + DL T +S + + A TV
Sbjct: 3370 SDTDTLKLVDLNPSDVELRRSGDHLYVKDLTTGQEIWIEYHFYSDSRDVVERIQFADGTV 3429
Query: 268 -----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
I + V ++GND + GNS N+ +G+D G +G DT + + L
Sbjct: 3430 WDRSNIAAFVATAGNDTITGNSGANILRGFAGDDGIVGLAGDDTVYGDDGNDL 3482
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 70/214 (32%), Gaps = 36/214 (16%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--------IGGVKNYIDLNTESWSSIG 254
GN+IY I+DSGG D + + D N + + G
Sbjct: 1754 GNDIYIFNRGDGRD----AIWDSGGSDTVRFGAGIAPGDLEFTQAQQDGDSNGLTLAIKG 1809
Query: 255 GYEKNMTI--AQHTVIESVVGSSGN--------DVVIGNS----------ANNVFFESSG 294
++ I A ++IE G+ D+ N+ ++ +SG
Sbjct: 1810 TADQLYIIGQAGGSLIERFEFFDGSVWTPQMLTDLRTSNNIGGQQVAVTMGDDTIVGTSG 1869
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D G G D + Y+ R + +YD +E + ++ + D +
Sbjct: 1870 TDTIRGMGGDDALRGGMGADTYRFARGDGFDTIYDPDEAAATDVLILDGINSGDVAVMFS 1929
Query: 355 NVKQRSILEYTAS----YEDLIQVIGQDVFESMK 384
I+ Y Y D +V G+ + ++
Sbjct: 1930 PTDTDDIILYIDDQSIVYLDQNRVGGKTGIDEIR 1963
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L S +S+ + E V +GND + N+ N+ +G+D G G
Sbjct: 1060 LQPGSLTSLSDRFDGIQFD-----EVVESGAGNDYITTNNGNDTLMGGTGDDNLIGGFGS 1114
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
DT+ + +I + Y + L + +D
Sbjct: 1115 DTYVWNLGDGHDRIEDSNYSETFY-PAWVGTNTLRFGAGISASD 1157
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 64/208 (30%), Gaps = 41/208 (19%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ GDD++ T + + I G + N T+ + + G +G+D + G S
Sbjct: 1383 TAGDDIVRGTAFNDTLSGM----GGDDEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGS 1438
Query: 285 ANNVFFESSGNDV-----------FDGSSGLDTFFYYAPSYLYKI-------------YR 320
++ +GND SSG DT + A I
Sbjct: 1439 GDDWLSGGAGNDTYLFNLGDGWDVLQDSSGTDTVRFAAGISAGDIRLSQVRQDGDVDGIM 1498
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQC-----------IDSVNVKQRSILEYTASYE 369
A + Q+ + +ER FAD V I+ TA +
Sbjct: 1499 LSIAGTTNRLHLVGQNGANRIERFEFADGTVWTDADLRQHLYSQVLTAGDDIVRGTAFND 1558
Query: 370 DLIQVIGQDVFESM--KHFYEFGLSEGR 395
L + G D + + G R
Sbjct: 1559 TLSGMGGDDEIAGVDGNDTLDGGAGNDR 1586
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-----NEHKQD 336
+ +++ +GND DG +G D + Y + + + D+ D
Sbjct: 3860 AGTGSDILTGGAGNDWLDGGAGADMAVFSGAMADYTVVTTNGTVTIVDSQPLLDGNDGTD 3919
Query: 337 FLSDVERLRFADQCIDSVN 355
L +E + F D ++
Sbjct: 3920 TLVGIETVSFRDGSLNLAA 3938
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 67/241 (27%), Gaps = 37/241 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW------------ 250
GN+ Y + + Y+ G D L L+ ++L
Sbjct: 3093 GNDTYVYASGDGNDHIVD--YNGGVTDSDTLKLVNLNPGDVELRRSGDQLYVKDLTTGQQ 3150
Query: 251 --------SSIGGYEKNMTIAQHTVIESVV--------GSSGNDVVIGNSANNVFFESSG 294
SS +N+ A TV G+S + + GNS N G
Sbjct: 3151 IWVEIQFHSSGSYAVENIQFADGTVWNLARIKQEAWYRGTSAGERIDGNSEGNTLLGKEG 3210
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G +G DT+ Y + +I + D DV R V
Sbjct: 3211 NDHLVGGAGSDTYVYQSGDGSDRIEDSPSTTTDVDRLVLLDLNPDDVTFSRVTSTGYMKV 3270
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESM-------KHFYEFGLSEGRDITFDSYLYLGS 407
N + + +L++ G + + G G D Y +
Sbjct: 3271 NATGEVLTIDYQFWNELVESRGLEEIQFADGTIWNRSQILAAGWFRGGDGNDSLSGYATA 3330
Query: 408 Y 408
Sbjct: 3331 N 3331
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 61/195 (31%), Gaps = 39/195 (20%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ GDD++ T + + I G + N T+ + + G +G+D + G S
Sbjct: 1545 TAGDDIVRGTAFNDTLSGM----GGDDEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGS 1600
Query: 285 ANNVFFESSGNDV-----------FDGSSGLDTFFYYAPSYLYKI-------------YR 320
++ +GND SSG DT + A I
Sbjct: 1601 GDDWLSGGAGNDTYLFNLGDGWDVLQDSSGTDTVRFAAGISAGDIRLSQVRQDGDVDGIM 1660
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQC-----------IDSVNVKQRSILEYTASYE 369
A + Q+ + +ER FAD V I+ TA +
Sbjct: 1661 LSIAGTTNRLHLVGQNGANRIERFEFADGTVWTDADLRQHLYSQVLTAGDDIVRGTAFND 1720
Query: 370 DLIQVIGQDVFESMK 384
L + G D +
Sbjct: 1721 TLSGMGGDDEIAGLD 1735
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ GND++IG++ + +G+D G +G D + Y A I ++ A
Sbjct: 1984 GTVGNDLLIGSNFADTLTGGTGDDRLVGGAGNDIYVYNAGDGNDVIVDSADSADSAAATG 2043
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ LS + AD + V I+ +
Sbjct: 2044 N---VLSFGPGITLADIRLTRNAVDGPLIISFAGQ 2075
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L S +S+ T + E+V +G+D + + ++ GND G G
Sbjct: 742 LQPGSLTSLSD-----TFYGNHFGETVAAGAGDDHIATGNGDDTLAGGLGNDNLIGGFGS 796
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
DT+ + +I Y + L + +D
Sbjct: 797 DTYVWNLGDGHDRIEDSNFTEYFY-PAWAGTNTLRFGAGISASD 839
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L S +S+ T + E+V +G+D + + ++ GND G G
Sbjct: 901 LQPGSLTSLSD-----TFYGNHFGETVAAGAGDDHIATGNGDDTLAGGLGNDNLIGGFGS 955
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
DT+ + +I Y + L + +D
Sbjct: 956 DTYVWNLGDGHDRIEDSNFTEYFY-PAWAGTNTLRFGAGISASD 998
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 8/110 (7%)
Query: 251 SSIGGYEKNMTIAQHTVIESVV--------GSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
SS +N+ A T+ + G+ G + + G+ A + ND G
Sbjct: 2907 SSTRYAIENIQFADGTIWDLARIQQEAWYRGTVGAETIDGSGAADTIVGKQENDFLRGGQ 2966
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G DT+ Y + I + + D + DVE R+ DQ
Sbjct: 2967 GNDTYVYASGDGNDHIVDYNGGVADSDTLKLVNLNPGDVELRRWGDQLYI 3016
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 27/67 (40%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++ G++ N+ ++G ++ GND DG +G D + ++ +
Sbjct: 1222 VTLNNIQGTASNNTLLGMGGDDEISGLDGNDTLDGGAGNDRLDGGNGDDILSGGLGDDWL 1281
Query: 326 IVYDANE 332
N+
Sbjct: 1282 SGGAGND 1288
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 45/195 (23%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI----DLNTESWSSIGG 255
G GN+ + + + G+D L G +N I LN + S
Sbjct: 2699 GGTGNDTFTVSGNGGHTFKFGA---GDGNDTLTNPGSGYARNDILQLVGLNADEVSLTRS 2755
Query: 256 YE------------------------------KNMTIAQHTVIESVV--------GSSGN 277
+ ++ A TV + G++
Sbjct: 2756 GDQLKVAITATGEVFNVAYQFWGEAQGAQYGLGSIAFADGTVWDRARIQREARIRGTAAG 2815
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ + G SA N + G+D G+ G D + Y + I + N + D +
Sbjct: 2816 ERIDGTSAPNTIQGNGGDDFLLGAGGDDIYLYASGDGNDHIVDYNNGVADSDTLKLIDLN 2875
Query: 338 LSDVERLRFADQCID 352
DVE R DQ
Sbjct: 2876 PGDVELRRSGDQLYV 2890
Score = 44.0 bits (102), Expect = 0.077, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D+ IG + GND G+ G D F Y + + A+
Sbjct: 2575 GGDDIFIGTNQAETVRGGQGNDTLSGNGGDDIFDYVGTANGIDSISGGDGFDTVRASADN 2634
Query: 335 QDF----LSDVERLR 345
L+ VERL
Sbjct: 2635 TRIVLSSLTSVERLT 2649
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
++G DV G ++ F +G+D G G D Y + + D+N
Sbjct: 598 TAGADVKTGLDQSDRFASGNGDDTLIGGKGNDNLIGGFGLDTYVWNLGDGHDRIEDSN 655
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 15/178 (8%)
Query: 225 SGGDDLLDLTLIGGVKN----YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G D +DL + D + WS G I + GS + V
Sbjct: 418 GAGGDRIDLRGAALTSRAGIEFFDFGSTIWS--RGQITAQAIFAKNAGSIISGSGTAESV 475
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G ++ +G D G G D++ + + I + D ++
Sbjct: 476 DGTRYDDALSGGAG-DTLRGGYGSDSYRFALGDGVVTID--------ERSFASDLDIVTF 526
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ AD + + ++ + S D + + QD+ + E ++G +T
Sbjct: 527 ASSIALADITVTVDPDASQDLIVHVGSAGDRLILKNQDIDSGVNSIEELRFADGTSLT 584
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 52/145 (35%), Gaps = 17/145 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT------LIGGVKNYIDLNTESWSS 252
G+ G++I+ + I +I G D + + ++ + + L +++
Sbjct: 2599 SGNGGDDIFDY---VGTANGIDSISGGDGFDTVRASADNTRIVLSSLTSVERLTGNGYAN 2655
Query: 253 IG---GYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLD 305
+ G ++ V++ ++ GND V V +GND F G+ G
Sbjct: 2656 VVVEWGASNDILNFSAVVLDGLTLETGGGNDSVTLTGGGIVLVGGTGNDTFTVSGNGGH- 2714
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDA 330
TF + A + + D
Sbjct: 2715 TFKFGAGDGNDTLTNPGSGYARNDI 2739
>gi|218511089|ref|ZP_03508967.1| calcium-binding domain-containing protein [Rhizobium etli Brasil 5]
Length = 338
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 5/168 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQ 264
+ + I DS + +TL+ DL E S ++ G + I
Sbjct: 12 TVTKTGAEFEAYDVIRDSAANPSAPVTLVVSDSGLADLADELGSVSANVTGSSGDNMITT 71
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G G D + G + N++ G+D +G G D + + + + +
Sbjct: 72 GAGNDNINGGDGADTLNGGAGNDLIQGGVGSDTLNGGDGNDMLWGDVGNDVIRGGAGNDT 131
Query: 325 IIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDL 371
I D + +++ D +D+ + ++ A + L
Sbjct: 132 ISDDDRFSF-TPAVFNIDAGDGDDAITVDTFSSLNSGTIDGGAGIDTL 178
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ + + +L ++DL S G + + I+ V G+D
Sbjct: 215 IWSTDPFPNFNPSLAVTDSAHLDL-----SDELGDRGSFIHGYASGID-VKTGGGDDEYF 268
Query: 282 GNSANNVFFESSGNDVFDGSSG 303
G N++F S GND+ +G++G
Sbjct: 269 GTDGNDIFDGSGGNDILNGNAG 290
>gi|332184085|gb|AEE26339.1| Iron-regulated protein frpA [Francisella cf. novicida 3523]
Length = 1829
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +++ G SGND ++G + ++ + SGND DG G DT +
Sbjct: 958 TLHGGSGNDLLDGGEGDDTLRGDSGNDTLLGGADDDKLYGGSGNDRLDGGEGNDTLRGDS 1017
Query: 312 PSYLYKIYRFENAIIVYDANE 332
+ + ++ D +
Sbjct: 1018 GNDTLLGGEGNDNLVDTDGSN 1038
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L T S ++ G + + I +++ G SGND++ G ++ SGND G +
Sbjct: 933 LGTSSDDTLHGSDTDDAIYGKAGDDTLHGGSGNDLLDGGEGDDTLRGDSGNDTLLGGADD 992
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
D + + + + D L E
Sbjct: 993 DKLYGGSGNDRLD----GGEGNDTLRGDSGNDTLLGGE 1026
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 31/109 (28%), Gaps = 8/109 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + + D+ WS + I + G GND + G N
Sbjct: 1187 GVDSIFNPNFVTTEEADDITGSEWSDTIEGKGGDDI--------LRGGIGNDRLDGGEGN 1238
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ SGND G G D S + ++ +
Sbjct: 1239 DTLRGDSGNDTLLGGEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRGGS 1287
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 31/109 (28%), Gaps = 8/109 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + + D+ WS + I + G GND + G N
Sbjct: 1415 GVDSIFNPNFVTTEEADDITGSEWSDTIEGKGGDDI--------LRGGIGNDRLDGGEGN 1466
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ SGND G G D S + ++ +
Sbjct: 1467 DTLRGDSGNDTLLGGEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRGGS 1515
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 46/119 (38%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+N ++ ++ +A +++VG+ +++ GN ++ SG+D+ +G +G
Sbjct: 1629 VNRLEFADGSILNRSDILAGTDSDDTLVGNDNTNIISGNEGDDTLIAGSGDDILEGGAGA 1688
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ A K + + D S+VE D + ++
Sbjct: 1689 DTYVIDANDTGTKTIKMSSNDDSIDTIRLDGVNSSNVEFEAVDDDLAILLRGNSGDLIS 1747
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 75/241 (31%), Gaps = 51/241 (21%)
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIG 237
P+V + ++G+ + IY T++ G+DLLD TL G
Sbjct: 930 PLVLGTSSDDTLHGSD---TDDAIYGKAGDD-------TLHGGSGNDLLDGGEGDDTLRG 979
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------NV 288
N L + G N + +++ G SGND ++G N NV
Sbjct: 980 DSGNDTLLGGADDDKLYGGSGNDRLDGGEGNDTLRGDSGNDTLLGGEGNDNLVDTDGSNV 1039
Query: 289 FFESSGND-------------------------VFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+G+D +G G D + S Y +
Sbjct: 1040 LDGGAGDDWVQGEGTLRGGSGSDGLWADEYSTNTLEGGQGDDRLYTGYRSTNTIKYNLGD 1099
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + E++ + I + L+ + DLI +G+D M
Sbjct: 1100 GFDLVARQGDGNAWGRRNEQI--YNDKILFGEGITKEDLKLSKEGNDLIIQVGEDSTNGM 1157
Query: 384 K 384
+
Sbjct: 1158 R 1158
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 40/196 (20%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
S + TI GGDD+L GG+ N + G E N T+ + ++++G
Sbjct: 1206 TGSEWSDTIEGKGGDDIL----RGGIGND---------RLDGGEGNDTLRGDSGNDTLLG 1252
Query: 274 SSGNDVVIGNSANNVFFESSGND-------------------------VFDGSSGLDTFF 308
GND ++ +NV +G+D +G G D +
Sbjct: 1253 GEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRGGSGSDGLWADEYSTNTLEGGQGDDRLY 1312
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
S Y + + + E++ + I + L+ +
Sbjct: 1313 TGYRSTNTIKYNLGDGFDLVARQGDGNAWGRRNEQI--YNDKILFGEGITKEDLKLSKEG 1370
Query: 369 EDLIQVIGQDVFESMK 384
DLI +G+D M+
Sbjct: 1371 NDLIIQVGEDSTNGMR 1386
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 40/196 (20%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
S + TI GGDD+L GG+ N + G E N T+ + ++++G
Sbjct: 1434 TGSEWSDTIEGKGGDDIL----RGGIGND---------RLDGGEGNDTLRGDSGNDTLLG 1480
Query: 274 SSGNDVVIGNSANNVFFESSGND-------------------------VFDGSSGLDTFF 308
GND ++ +NV +G+D +G G D +
Sbjct: 1481 GEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRGGSGSDGLWADEYSTNTLEGGQGDDRLY 1540
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
S Y + + + E++ + I + L+ +
Sbjct: 1541 TGYRSTNTIKYNLGDGFDLVARQGDGNAWGRRNEQI--YNDKILFGEGITKEDLKLSKEG 1598
Query: 369 EDLIQVIGQDVFESMK 384
DLI +G+D M+
Sbjct: 1599 NDLIIQVGEDSTNGMR 1614
>gi|114640111|ref|XP_001154066.1| PREDICTED: matrix metalloproteinase 3 isoform 3 [Pan troglodytes]
Length = 468
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 51/188 (27%), Gaps = 46/188 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 221 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 256
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 257 NGIQSLYG 264
>gi|218547939|ref|YP_002381730.1| adhesin for cattle intestine colonization [Escherichia fergusonii
ATCC 35469]
gi|218355480|emb|CAQ88089.1| adhesin for cattle intestine colonization [Escherichia fergusonii
ATCC 35469]
Length = 7222
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + S
Sbjct: 6998 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSVTTAQATG 7051
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y S
Sbjct: 7052 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTINIGNGGHDTLLYKLLSASDAT 7111
Query: 319 YRFENAII 326
+ ++
Sbjct: 7112 GGNGSDVV 7119
>gi|284054923|ref|ZP_06385133.1| hypothetical protein AplaP_26066 [Arthrospira platensis str.
Paraca]
Length = 168
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 13/95 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ ++IY GG+D + +GG N + G N + + ++G
Sbjct: 87 GTSIAESIYGRGGNDTI--FGMGGNDN-----------LEGGFGNNLLLGGEGNDFILGG 133
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
GND + G +++ GNDV G G DT
Sbjct: 134 PGNDTLYGGQDDDLLLGGEGNDVIWGDIGNDTIDG 168
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E +G+S + + G N+ F GND +G G + + +
Sbjct: 83 ELKIGTSIAESIYGRGGNDTIFGMGGNDNLEGGFGNNLLLGGEGND----FILGGPGNDT 138
Query: 329 DANEHKQDFLSDVE 342
D L E
Sbjct: 139 LYGGQDDDLLLGGE 152
Score = 41.3 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ E++ G+ +++ IG S + GND G G D + L
Sbjct: 70 NVTQETLEGTEADELKIGTSIAESIYGRGGNDTIFGMGGNDNLEGGFGNNLL----LGGE 125
Query: 325 IIVYDANEHKQDFLSDVER 343
+ D L +
Sbjct: 126 GNDFILGGPGNDTLYGGQD 144
>gi|256427107|gb|ACU81101.1| adenylate cyclase toxin [Bordetella pertussis]
Length = 1706
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G D +D + G L+ +
Sbjct: 1454 RLYGE----AGDD----WFFQDAANAGNLLDGGDGRDTVDFSGPGRG-----LDAGAKGV 1500
Query: 250 WSSIGGYEKNMTIAQHTV-----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS+ +DV+IG++ N +GNDV G +G
Sbjct: 1501 FLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANALNGLAGNDVLSGGAGD 1560
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + + +N
Sbjct: 1561 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYE----SGGGRDTIRINAG 1616
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1617 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1646
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S + G D D V+N ++ S IG + N + Q
Sbjct: 1227 YGFGIEADLSREWVRKASALGVDYYD-----NVRNVENVIGTSMKDVLIGDAQANTLMGQ 1281
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V G G+D++ G N++ + +GND G G DT A + + +
Sbjct: 1282 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREH 1340
Query: 325 IIVYDANEHKQDFL 338
++ D +
Sbjct: 1341 DVLRGG--DGVDTV 1352
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N SG+D DG +G DT ++ +
Sbjct: 1010 VQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQ 1069
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 1070 DLGVWSNQLDGGAGVDTVKY 1089
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/362 (17%), Positives = 108/362 (29%), Gaps = 58/362 (16%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 1304 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQT 1357
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGSSGNDVVIGNSA 285
G I L + +G + + A TV IE+VVG+ D + G++
Sbjct: 1358 GAHAGIAAGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 1415
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYL-------YKIYRFENAIIVYDANEHKQDFL 338
NV + G DV G G D ++Y + + + L
Sbjct: 1416 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLL 1475
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ D + + + + + ++ + ++ E + RD
Sbjct: 1476 DGGDGRDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDV 1535
Query: 399 F------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
++ L D L G D EG + + A ++DL
Sbjct: 1536 LIGDAGANALNGLAGNDVLSGGAGDDVLLG---------DEGSDLLSGDAG-----NDDL 1581
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGR-----FVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
D L VG H + + GR D + +DL A
Sbjct: 1582 FGGQGDDTYLFGVGYGHDTIYESGGGRDTIRINAGADQLWFARQGNDLEIRILGTDDALT 1641
Query: 508 RH 509
H
Sbjct: 1642 VH 1643
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 15/193 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 1063 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 1122
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GS ND + G+ +N + GND G G D L
Sbjct: 1123 -NLFSVDHVKNIENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLG--LD 1179
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D + + EY E DL +
Sbjct: 1180 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREW 1239
Query: 376 GQDVFESMKHFYE 388
+ +Y+
Sbjct: 1240 VRKASALGVDYYD 1252
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + + G +GND ++G N +G+DV DG
Sbjct: 1021 SITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDG 1080
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 1081 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSR 1140
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
Q + L + + G D+
Sbjct: 1141 LNDRIAGDDQDNELWGHDGNDTIRGRGGDDIL 1172
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G SG+D + G + N+ G + G +G D F +
Sbjct: 1015 GGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVW 1074
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 1075 SNQLDGGAGVDTV 1087
>gi|4826834|ref|NP_004986.1| matrix metalloproteinase-14 preproprotein [Homo sapiens]
gi|317373419|sp|P50281|MMP14_HUMAN RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=MMP-X1; AltName: Full=Membrane-type matrix
metalloproteinase 1; Short=MT-MMP 1; Short=MTMMP1;
AltName: Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
gi|963054|emb|CAA88372.1| membrane-type matrix metalloproteinase 1 [Homo sapiens]
gi|1127837|gb|AAA83770.1| membrane-type matrix metalloproteinase-1 [Homo sapiens]
gi|119586641|gb|EAW66237.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_b [Homo
sapiens]
gi|168277826|dbj|BAG10891.1| matrix metalloproteinase-14 precursor [synthetic construct]
Length = 582
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|332706931|ref|ZP_08426991.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332354196|gb|EGJ33676.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 287
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 55/171 (32%), Gaps = 11/171 (6%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
P T+ GDD L G N + S+ G T+ ++++G
Sbjct: 6 GGPGNDTLMGGAGDDTL----RGNAGNDSLVGGAGDDSLVGGAGKDTLIGGAGKDTLMGG 61
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G+D + GN+ N+ +G+D G +G DT A A
Sbjct: 62 AGDDTLRGNAGNDSLVGGAGDDSLVGGAGKDTLIGGAGKDTL----MGGAGDDTLRGNAG 117
Query: 335 QDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L + L + + L A + LI +G D
Sbjct: 118 NDSLVGGAGDDSLVGGAGDDSLLGGAGKDTLIGGAGKDTLIGGVGNDSLSG 168
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 1/130 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ +++ G++GND ++G + ++ +G D G +G DT A
Sbjct: 6 GGPGNDTLMGGAGDDTLRGNAGNDSLVGGAGDDSLVGGAGKDTLIGGAGKDTLMGGAGDD 65
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ N +V A + + + L + L A + L+
Sbjct: 66 TLR-GNAGNDSLVGGAGDDSLVGGAGKDTLIGGAGKDTLMGGAGDDTLRGNAGNDSLVGG 124
Query: 375 IGQDVFESMK 384
G D
Sbjct: 125 AGDDSLVGGA 134
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 52/165 (31%), Gaps = 8/165 (4%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G D L D TL G N + S+ G + ++ +
Sbjct: 87 GGAGKDTLIGGAGKDTLMGGAGDDTLRGNAGNDSLVGGAGDDSLVGGAGDDSLLGGAGKD 146
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G +G D +IG N+ GND G G DT PS N I
Sbjct: 147 TLIGGAGKDTLIGGVGNDSLSGGVGNDSLSGGLGNDTIVGVNPSSN---NPGVNEIDTLT 203
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
F + + +++ S D IQ+
Sbjct: 204 GGAGADTFAIGNSNNPYYVGGGGPAGLNDYALITDFQSGTDKIQL 248
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 52/133 (39%), Gaps = 8/133 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + ++ GDD +L+GG + ++ G + T+ + +
Sbjct: 64 DDTLRGNAGNDSLVGGAGDD----SLVGGAGKDTLIGGAGKDTLMGGAGDDTLRGNAGND 119
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+VG +G+D ++G + ++ +G D G +G DT + +++
Sbjct: 120 SLVGGAGDDSLVGGAGDDSLLGGAGKDTLIGGAGKDTLIGGVGNDSLSGGVGNDSL---- 175
Query: 330 ANEHKQDFLSDVE 342
+ D + V
Sbjct: 176 SGGLGNDTIVGVN 188
>gi|300697814|ref|YP_003748475.1| hemagglutinin/hemolysin-related protein (fragment) [Ralstonia
solanacearum CFBP2957]
gi|299074538|emb|CBJ54089.1| putative hemagglutinin/hemolysin-related protein (fragment)
[Ralstonia solanacearum CFBP2957]
Length = 1966
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 228 DDLLDLTLIGGVKNYID---LNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D L+ ++ L T S+I G N T+ + + + G +G+D + G
Sbjct: 1745 TDSTSLSSTANAGQLLNVSLLGTTQPSAIIEGTSGNDTLTGTSGNDRIYGYAGDDTLSGG 1804
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-----VYDANEHKQDFL 338
N++ +GNDV +G +G D A + + + + + D +
Sbjct: 1805 DGNDLLRGGAGNDVLNGGNGNDILIGGAGNDTLTGDAGGDIFLWEVSAANNTGGNGTDVI 1864
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+D + ++ YTA +
Sbjct: 1865 TDFTLASGPNDATADRIDVSALLVGYTAEAD 1895
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 44/117 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY + T++ + + G +GNDV+ G + N++ +GND G +G D F +
Sbjct: 1792 IYGYAGDDTLSGGDGNDLLRGGAGNDVLNGGNGNDILIGGAGNDTLTGDAGGDIFLWEVS 1851
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + I + D +D + + + A+ +
Sbjct: 1852 AANNTGGNGTDVITDFTLASGPNDATADRIDVSALLVGYTAEADGAAHYVNGVATID 1908
>gi|256829658|ref|YP_003158386.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256578834|gb|ACU89970.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 2836
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 63/215 (29%), Gaps = 37/215 (17%)
Query: 206 IYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+Y + T+ G D +D + DLN + + IGG N +
Sbjct: 1569 VYGFVGNDILRGGVNADTLDGGLGTDTVDYSASAAWVQA-DLNLAT-AQIGGGAGNDALG 1626
Query: 264 QH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
IE++ GSS +D + G+ NV +G D G +G DT A
Sbjct: 1627 DVLAGIENLTGSSWDDSLTGDGQANVLTGLAGIDTLIGGAGNDTLIGGAGVDSMDGGTGT 1686
Query: 323 NAIIVYDANEHKQ--------------------DFLSDVERLRFADQCI----------- 351
+ Q D L+ +E L
Sbjct: 1687 DMGDYSGGASWVQVNLTLATAQVGGGADNDALGDTLAGIENLTGTTDTAHGDVLTGNTLA 1746
Query: 352 -DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + L + + LI +G D + H
Sbjct: 1747 NLLIGLDGDDTLIGGSGNDTLIGGVGADSLDGGLH 1781
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 9/149 (6%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGS 274
T+ G D + +L N +DL S + GG N A V IE+V GS
Sbjct: 2159 GNDTLDGGTGSDTANYSLSTSAVN-VDL-ALSTAQTGGEVGNH--AAGDVLISIENVTGS 2214
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ D + G+ NNV +G+D G G DT A S + ++
Sbjct: 2215 AYGDTLTGDGGNNVLSGLAGDDSLIGGGGDDTLIGGAGSD--TFQGGDGDDLIRAGAGDV 2272
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + L D+ +D + + +E
Sbjct: 2273 VDGGVGSDVLVSEDEYLDVTSSTTITGIE 2301
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 65/201 (32%), Gaps = 10/201 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-- 267
+ I G D D N +DLN + ++ A+
Sbjct: 522 NDTLRGGAGADLIDGGAGQDFADYRTSASWVN-VDLNIQDGTTAQSGGGADNDAEGDTLI 580
Query: 268 -IESVVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+++GS+ DV+ GN+ANN G+D G +G DT A +
Sbjct: 581 GIENLIGSNDATHGDVLTGNAANNHLIGLDGDDTLIGGAGNDTLVSGAGADRVDGGTGTR 640
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ Y A+ + +++ A + N + IL ED+ D
Sbjct: 641 DLADYSASTAWVNVDLNIQNGTTAQTGGGAGNHAEGDILTGI---EDVNGSQYSDSLTGN 697
Query: 384 KHFYEFGLSEGRDITFDSYLY 404
+G D F Y
Sbjct: 698 GGSNRIWAYDGDDTIFGGGFY 718
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+Y G D +D T IDL + + G E ++ I IE+V+GS ND +
Sbjct: 446 LYTQEGGDTVDYT-ASTAAVDIDLTRATQAG-GHAEGDVLIG----IENVIGSGFNDSIT 499
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G++A N G D G G DT A + L ++
Sbjct: 500 GDAAANFLSGLDGTDTLLGGVGNDTLRGGAGADLIDGGAGQD 541
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 41/141 (29%), Gaps = 1/141 (0%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + I D G D G N I + GG +
Sbjct: 660 NGTTAQTGGGAGNHAEGDILTGIEDVNGSQYSDSLTGNGGSNRIWAYDGDDTIFGGGFYD 719
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI +S+ G + D + G++ N+ G D G +G D + + + +
Sbjct: 720 -TIHGGDGNDSIDGGTHEDFIYGDAGNDTLHGGGGIDSIWGGAGDDYLYGGSDNTQDLLI 778
Query: 320 RFENAIIVYDANEHKQDFLSD 340
+ + D L
Sbjct: 779 GGTGNDTLEGGSATLLDTLIG 799
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 61/188 (32%), Gaps = 21/188 (11%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG-----------YEKNMTIAQH 265
T+ G D D +L +DLN + + GG Y +
Sbjct: 1010 GGNDTLDGGDGIDTADYSL-SEASVLVDLNLTTAQTGGGDVTTALYWFDAYTSGTRYGGN 1068
Query: 266 -------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LY 316
IE+V GS+ D +IG+ NNV G D G G DT Y +
Sbjct: 1069 HAQGDMLVSIENVTGSAYGDTLIGDGGNNVLSGLDGADSLVGGDGSDTADYSLSTSAVNV 1128
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + N + D L+ +E + + V +IL+ + +I G
Sbjct: 1129 DLTLTTSQTGGEAGNHAEGDVLTGMENVTGSAHADTLVGDAGVNILDGLGGDDVIIAGAG 1188
Query: 377 QDVFESMK 384
V
Sbjct: 1189 DTVLGGAG 1196
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 19/201 (9%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP--FIQTIY 223
F S + M+ I + G+ + S ++
Sbjct: 1056 FDAYTSGTRYGGNHAQGDMLVSIE------NVTGSAYGDTLIGDGGNNVLSGLDGADSLV 1109
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIG 282
G D D +L N +DL + S GG N T +E+V GS+ D ++G
Sbjct: 1110 GGDGSDTADYSLSTSAVN-VDLTLTT-SQTGGEAGNHAEGDVLTGMENVTGSAHADTLVG 1167
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++ N+ G+DV +G DT A S + +Y + ++ + +S VE
Sbjct: 1168 DAGVNILDGLGGDDVIIAGAG-DTVLGGAGSDV--LYSGDASLDIS-----ASTTISGVE 1219
Query: 343 RLRFADQCIDSVNVKQRSILE 363
R+ +
Sbjct: 1220 RIDLTGTAGSLTVSGDAILYN 1240
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 245 LNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L + S++ G + + TI +++ G GND + G + + + +GND G G
Sbjct: 1836 LTGNNLSNLLSGLDGDDTIYGGGFYDTIYGGDGNDSIDGGTHEDAIYGGTGNDTLHGGGG 1895
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+D+ A +Y + I D L
Sbjct: 1896 IDSIRGGAGDD--YLYGGADNIQDLLIGGTGNDTLEG 1930
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 46/145 (31%), Gaps = 11/145 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G +LG+ + IE + +G + L+ + G +I G
Sbjct: 1808 GDGNHALGDTLAGIENLTGTNDIAHGDVLTGNNLSNLLSGLDGDD-----------TIYG 1856
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
TI +S+ G + D + G + N+ G D G +G D + A +
Sbjct: 1857 GGFYDTIYGGDGNDSIDGGTHEDAIYGGTGNDTLHGGGGIDSIRGGAGDDYLYGGADNIQ 1916
Query: 316 YKIYRFENAIIVYDANEHKQDFLSD 340
+ + + D L
Sbjct: 1917 DLLIGGTGNDTLEGGSATLWDTLVG 1941
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 17/130 (13%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D ++G ++ +G+D+ DG +G D Y + + +
Sbjct: 2425 NIQGLGGDDTLLGGPGDDTLAGGAGSDLMDGGAGYDMASYSTSASWVDMDLNLQDGVTAQ 2484
Query: 330 A-----NEHKQDFLSDVE------------RLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ N D L E L DQ V + L A + L+
Sbjct: 2485 SGGGAANHAAGDTLIGFEGVIGSNDAAHGDVLTGDDQANMLVGLDGDDSLVGGAGNDTLV 2544
Query: 373 QVIGQDVFES 382
+G D E
Sbjct: 2545 GGLGYDTLEG 2554
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 22/214 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG---GDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
L ++ Y + T+ G D L G N ID W I G
Sbjct: 2596 MVDLTDSWYSFPNSSYSDAYCDTLVGIENIIGSQWFDSLLGDGGANMID-GGGYWDYILG 2654
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA---- 311
+ T+ + +++ G +GND + G + N++ +G D G +G D A
Sbjct: 2655 RGGDDTLLGGSDNDTLDGGAGNDFMDGGADNDLLIGGAGIDTIQGGTGDDLIHGGADDVV 2714
Query: 312 -PSYLYKIYRFENAIIVYDANEHK----QDFLSDVERLRF----ADQCIDSVNVKQRSIL 362
+ +R E+ I A + ++ +ER+ D ++ + +
Sbjct: 2715 DGGDGFDTFRLEDNIGTGSAFDLGAMNDAGRITGIERIDITGDADDANTLTLRAEDVFEV 2774
Query: 363 EYTASY-----EDLIQVIGQDVFESMKHFYEFGL 391
+ Y D + +G+ + G
Sbjct: 2775 SGGSLYIDGDTGDSVTTMGEGWTQEAADVSHEGQ 2808
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ G+ ++ GG D+ T +++G + I E G G+D++IG
Sbjct: 842 DADGNLMVQPGKPGGDDATGDILTGIVNAVGTNGSDTLIGNDQANEM-FGVDGDDLMIGG 900
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ N+ + ND +G G D + + + + V
Sbjct: 901 AGNDKLEGVNNNDTLEGGLGADYIWGGMDYDIASYANAASGVNVS 945
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 61/211 (28%), Gaps = 36/211 (17%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ G D+ D + G ++L + GG + + IE
Sbjct: 1668 NDTLIGGAGVDSMDGGTGTDMGDYSG-GASWVQVNLTLATAQVGGGADNDALGDTLAGIE 1726
Query: 270 SVVGSS---------------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G++ G+D +IG S N+ G D DG D
Sbjct: 1727 NLTGTTDTAHGDVLTGNTLANLLIGLDGDDTLIGGSGNDTLIGGVGADSLDGGLHSDMVD 1786
Query: 309 YYAPSYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQ------------CIDSV 354
Y A + + + D N D L+ +E L +
Sbjct: 1787 YSASASWVNVNLNLATAQLGGGDGNHALGDTLAGIENLTGTNDIAHGDVLTGNNLSNLLS 1846
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + Y+ + G D + H
Sbjct: 1847 GLDGDDTIYGGGFYDTIYGGDGNDSIDGGTH 1877
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 2/104 (1%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHK 334
++++ G +++ SGND DG +G DT Y + + + N
Sbjct: 2142 HNLIEGRGGDDILAGLSGNDTLDGGTGSDTANYSLSTSAVNVDLALSTAQTGGEVGNHAA 2201
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D L +E + + ++L A + LI G D
Sbjct: 2202 GDVLISIENVTGSAYGDTLTGDGGNNVLSGLAGDDSLIGGGGDD 2245
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 12/138 (8%)
Query: 249 SWSSIGGYEKNMTIAQHTVIE------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + I IA V+ + G G+D + G + + GND DG +
Sbjct: 1817 TLAGIENLTGTNDIAHGDVLTGNNLSNLLSGLDGDDTIYGGGFYDTIYGGDGNDSIDGGT 1876
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D + + ++I +++ +++ L D++ ++
Sbjct: 1877 HEDAIYGGTGNDTLHGGGGIDSIRGGAGDDYLYGGADNIQDLLIGGTGNDTLEGGSATL- 1935
Query: 363 EYTASYEDLIQVIGQDVF 380
++ L+ +G D
Sbjct: 1936 -----WDTLVGGMGADRI 1948
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 52/133 (39%), Gaps = 9/133 (6%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN-------DVFDGSSGLDTF 307
G + + ++ +++VG G D + G ++ F + G+ D G +G+DT
Sbjct: 2527 GLDGDDSLVGGAGNDTLVGGLGYDTLEGGDGDDWFQDGVGSYDNTYTGDYLVGGAGIDTV 2586
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYT 365
Y + + ++ +++ D L +E + + + ++++
Sbjct: 2587 DYSNSLDVCMVDLTDSWYSFPNSSYSDAYCDTLVGIENIIGSQWFDSLLGDGGANMIDGG 2646
Query: 366 ASYEDLIQVIGQD 378
++ ++ G D
Sbjct: 2647 GYWDYILGRGGDD 2659
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T I + VG++G D +IGN NN +D+ G G D+ + + + E+
Sbjct: 2007 TGIVNAVGTNGADTLIGNDQNNEMLGQDADDLMIGGVGNDSLWGVNNNDTLEGGLGED 2064
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 20/137 (14%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY--------------- 309
+ +E S +++ G + ++V GND DG G+DT Y
Sbjct: 982 GSTVEQPEYLSAQNLLQGGAGDDVLAGLGGNDTLDGGDGIDTADYSLSEASVLVDLNLTT 1041
Query: 310 ---YAPSYLYKIYRFE--NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+Y F+ + Y N + D L +E + + + ++L
Sbjct: 1042 AQTGGGDVTTALYWFDAYTSGTRYGGNHAQGDMLVSIENVTGSAYGDTLIGDGGNNVLSG 1101
Query: 365 TASYEDLIQVIGQDVFE 381
+ L+ G D +
Sbjct: 1102 LDGADSLVGGDGSDTAD 1118
Score = 44.7 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 43/158 (27%), Gaps = 23/158 (14%)
Query: 280 VIGNSANNVFFESSGNDVFDGSS--------------GLDTFFYYAPSYLYKIYRFENAI 325
V G N+ +G+D DG G DT Y A + I
Sbjct: 414 VFGFDGNDTLRGGAGSDTLDGGGQTYASHTPWLYTQEGGDTVDYTASTAAVDIDLTRA-- 471
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESM 383
+ D L +E + + + L + L+ +G D +
Sbjct: 472 -TQAGGHAEGDVLIGIENVIGSGFNDSITGDAAANFLSGLDGTDTLLGGVGNDTLRGGAG 530
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ G + F Y S+ ++ A
Sbjct: 531 ADLIDGGAGQD----FADYRTSASWVNVDLNIQDGTTA 564
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+VG G+D ++G + N+ G D +G G D ++ Y + ++
Sbjct: 2525 LVGLDGDDSLVGGAGNDTLVGGLGYDTLEGGDGDD--WFQDGVGSYDNTYTGDYLV 2578
>gi|254424020|ref|ZP_05037738.1| Zinc carboxypeptidase family [Synechococcus sp. PCC 7335]
gi|196191509|gb|EDX86473.1| Zinc carboxypeptidase family [Synechococcus sp. PCC 7335]
Length = 964
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 220 QTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
IY GGDD + D+ + + + S + G + I + + G
Sbjct: 788 DVIYALGGDDTVAGGLGNDVLFGEDGDDVLRGDRNSRNPGGAAGGDDIIYGGNGSDRIGG 847
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SGND + G++ ++ + G+D+ G G D S + A
Sbjct: 848 KSGNDSLYGDAGDDFIWGDDGDDLIWGGRGNDVLTGDDNSG------GSGSDTFVLAFGD 901
Query: 334 KQDFLSDVER 343
D ++D E
Sbjct: 902 GTDTITDFEV 911
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 44/142 (30%), Gaps = 2/142 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T + I N T+ + + + E++VG DV+ ++ GNDV G G D
Sbjct: 756 TAVFLDIVPTPANATVMEGSALAETLVGQGQPDVIYALGGDDTVAGGLGNDVLFGEDGDD 815
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
S + II + S + L + D D + L +
Sbjct: 816 VLRGDRNSRNPGGAAGGDDIIYGGNGSDRIGGKSGNDSL-YGDAGDDFIWGDDGDDLIWG 874
Query: 366 ASYEDLIQVIGQDVFESMKHFY 387
D++ F
Sbjct: 875 GRGNDVLTGDDNSGGSGSDTFV 896
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 44/149 (29%), Gaps = 7/149 (4%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+D T + I + + N + ++ V + V+ G++
Sbjct: 728 TIDTTDFMPGRYTI------FVEGQDADGNWGVPTAVFLDIVPTPANATVMEGSALAETL 781
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
DV G DT + + + ++ D N + + + +
Sbjct: 782 VGQGQPDVIYALGGDDTVAGGLGNDVL-FGEDGDDVLRGDRNSRNPGGAAGGDDIIYGGN 840
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + K + Y + +D I D
Sbjct: 841 GSDRIGGKSGNDSLYGDAGDDFIWGDDGD 869
>gi|293403609|ref|ZP_06647700.1| predicted protein [Escherichia coli FVEC1412]
gi|291429462|gb|EFF02482.1| predicted protein [Escherichia coli FVEC1412]
Length = 1274
Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 1050 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 1103
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 1104 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 1163
Query: 319 YRFENAII 326
+ ++
Sbjct: 1164 GGNGSDVV 1171
>gi|307152761|ref|YP_003888145.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306982989|gb|ADN14870.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 680
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 230 LLDLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D ID + ++ G N T+ T +++ G +GND++ G + N
Sbjct: 491 TTDGRGAFRADGRIDSGAFEFGASLNLTGGTGNDTLTGGTGNDTLSGGAGNDILNGATGN 550
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
++ GND G G DT + L + +NA + N
Sbjct: 551 DILKGDGGNDTLSGDLGSDTLIGGTGNDLLNLGNSDNAFDLISYNSG 597
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 234 TLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ ++L + + + G N T++ + + G++GND++ G+ N+
Sbjct: 506 SGAFEFGASLNLTGGTGNDTLTGGTGNDTLSGGAGNDILNGATGNDILKGDGGNDTLSGD 565
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRF---ENAIIVYDANEHKQDFLSDVER 343
G+D G +G D + + + + + V + D LS
Sbjct: 566 LGSDTLIGGTGNDLLNLGNSDNAFDLISYNSGDGSDTVNQFSRTGGDQLSFTNI 619
>gi|170749424|ref|YP_001755684.1| hypothetical protein Mrad2831_3017 [Methylobacterium radiotolerans
JCM 2831]
gi|170655946|gb|ACB25001.1| hypothetical protein Mrad2831_3017 [Methylobacterium radiotolerans
JCM 2831]
Length = 322
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 12/85 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD Y Y D ARHY+ G +EGR+P F Y+ ++ D+ A
Sbjct: 230 PGFDEEYYRSWYADTCQY----PHGLARHYLDLGWREGRDPSGHFSTDGYLDANPDVRAA 285
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRF 480
+ HF G +GR
Sbjct: 286 GVNP-------LVHFLEVGFAQGRT 303
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSY 402
R+ + + Y + Y D Q +H+ + G EGRD + F +
Sbjct: 218 RYGLERYLETPLPGFDEEYYRSWYADTCQY----PHGLARHYLDLGWREGRDPSGHFSTD 273
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
YL + D+R H++ G +GR
Sbjct: 274 GYLDANPDVRAA----GVNPLVHFLEVGFAQGRT 303
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 12/114 (10%)
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
L + A A + +D + E FD Y Y D ARHY+
Sbjct: 201 LRDYAAVAARITGHIRDRYGLERYLETPLPGFDEEYYRSWYADTCQY----PHGLARHYL 256
Query: 512 THGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
G +EGR+P F Y+ ++ D+ A + HF G+ +GR+
Sbjct: 257 DLGWREGRDPSGHFSTDGYLDANPDVRAAGVNP-------LVHFLEVGFAQGRT 303
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 42/135 (31%), Gaps = 19/135 (14%)
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
FG E ++L D V G Y E P EY
Sbjct: 186 RFGLAEDDAFIDGTHL-----RDYAAVAARITGHIRDRYGLERYLE--TPLPGFDEEYYR 238
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA 589
S +AD H+ + G+ EGR + F+ D YL + D+
Sbjct: 239 S------WYADTCQYPHGLARHYLDLGWREGRDPSGHFSTDGYLDANPDVRAA----GVN 288
Query: 590 AAQHYITHGMKEGRA 604
H++ G +GR
Sbjct: 289 PLVHFLEVGFAQGRT 303
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 13/95 (13%)
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
G+ E DAF ++ + + + +D + Y E F+ +
Sbjct: 186 RFGLAE---DDAFIDGTHLRDYAAVAAR------ITGHIRDRYGLERYLETPLPGFDEEY 236
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
Y + Y D A+HY+ G +EGR
Sbjct: 237 YRSWYADTCQY----PHGLARHYLDLGWREGRDPS 267
>gi|168760354|ref|ZP_02785361.1| large repetitive protein [Escherichia coli O157:H7 str. EC4501]
gi|217324980|ref|ZP_03441064.1| FG-GAP repeat domain protein [Escherichia coli O157:H7 str. TW14588]
gi|189369040|gb|EDU87456.1| large repetitive protein [Escherichia coli O157:H7 str. EC4501]
gi|217321201|gb|EEC29625.1| FG-GAP repeat domain protein [Escherichia coli O157:H7 str. TW14588]
Length = 5188
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 4964 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 5017
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 5018 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 5077
Query: 319 YRFENAII 326
+ ++
Sbjct: 5078 GGNGSDVV 5085
>gi|149202355|ref|ZP_01879328.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
gi|149144453|gb|EDM32484.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
Length = 748
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 2/140 (1%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ +GG+DL++ + I + N D G + I ++V+ GND V
Sbjct: 169 VDGTGGNDLINGSYIEPIANGSDRVDNGDGVSGPGFNDDVINAGAGNDTVLAGLGNDSVQ 228
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + + SGND G G DT + ++Y + DV
Sbjct: 229 GGTGADSLSGESGNDTLLGQGGNDTLIGGNGDD--SLEGGAGNDVLYGDGGTATRWSYDV 286
Query: 342 ERLRFADQCIDSVNVKQRSI 361
F + ++ ++
Sbjct: 287 YTRDFTSANGQAFTIESGTL 306
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 18/206 (8%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
+D+ T + +D +A G G+ GN++ + + + + G
Sbjct: 143 TLDSVNASTNTNLGADRLAQAWDNGVVDGTGGNDLINGSYIEPIANGSDRVDNGDG---- 198
Query: 232 DLTLIGGVKNYIDLNTESWS--------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
++ G + I+ + + S+ G +++ + ++++G GND +IG
Sbjct: 199 -VSGPGFNDDVINAGAGNDTVLAGLGNDSVQGGTGADSLSGESGNDTLLGQGGNDTLIGG 257
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ ++ +GNDV G G T + Y A + +
Sbjct: 258 NGDDSLEGGAGNDVLYGDGGTATRWSYDVYTRDFTSANGQAFTIESGTLAGSGTSAG--- 314
Query: 344 LRFADQCIDSVNVKQRSILEYTASYE 369
F Q +Y Y
Sbjct: 315 --FDVTGHGQQATGQADPNDYGIIYT 338
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 33/145 (22%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------------------- 231
IY + + + +Y+ D I+ + +G
Sbjct: 336 IYTSNLIASADGVYRFATTSDDGSTIRILDSNGDPLTFTNQIGTTGSFLDNDFHQAATTR 395
Query: 232 --DLTLIGGVKNYIDLNTESWSSIGG--YEKNMTIAQHTVIESVVGSS--GNDVVIGNSA 285
D+TL G I++ W ++GG +T+ V + + G+D + GN
Sbjct: 396 WGDVTLEAGQSYTIEVRY--WENLGGNVLSGTVTLPGGAVQDLATSALIVGSDAIEGN-- 451
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYY 310
++ +G D+ G G DT
Sbjct: 452 -DLLDGGAGADLLFGEGGNDTLIAG 475
>gi|62860164|ref|NP_001015921.1| matrix metallopeptidase 15 [Xenopus (Silurana) tropicalis]
gi|197246650|gb|AAI68432.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
gi|213626999|gb|AAI70564.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
gi|213627211|gb|AAI70917.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
Length = 648
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 64/203 (31%), Gaps = 55/203 (27%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS---- 74
+ W+ + Y + + + R A WSK LTF E
Sbjct: 125 TGRKWNQQHLTYSIQNYSDKLGMHNS-------IDAIRKAFDVWSKATSLTFREVPYEAV 177
Query: 75 ----IHSDIKFISSNNGYVCTPRYDS-------RYFM------EINFDKADVWR--YGIG 115
+DI + ++ + + +D YF + +FD + W
Sbjct: 178 RQRHSSADILILFASGFHGDSSPFDGPGGFLAHAYFPGPGMGGDAHFDSEEPWTVENMDL 237
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
G L A+HE+GH+LGL H + + +M+ F D
Sbjct: 238 AGNHLFLVAVHELGHSLGLEHSNNPSA-------------------IMAPFYQWMDTEDF 278
Query: 176 SFGYCATPMVSDIVAVQKIYGAP 198
D +Q++YG P
Sbjct: 279 Q------LPEDDRRGIQQLYGPP 295
>gi|114640081|ref|XP_508721.2| PREDICTED: matrilysin isoform 2 [Pan troglodytes]
Length = 267
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 71/215 (33%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W++ + Y+ T + L AL W
Sbjct: 84 KPRCGVPDVAEYSLFPHSPKWTSKVVTYRIVSYTRDLPHITVDRL-------VSKALNMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F + +DI + + + +D + +FD+ +
Sbjct: 137 GKEIPLHFRKVVRGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFM 167
W G G + A HE+GH+LG+ H N YP YG
Sbjct: 197 RWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNG----------------D 240
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
PQ+ + DI +QK+YG S
Sbjct: 241 PQNFKLSQ----------DDIKGIQKLYGKRSNSR 265
>gi|89902526|ref|YP_524997.1| hemolysin-type calcium-binding protein [Rhodoferax ferrireducens
T118]
gi|89347263|gb|ABD71466.1| Hemolysin-type calcium-binding protein [Rhodoferax ferrireducens
T118]
Length = 1166
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 7/138 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGD---DLLDLTLIGGV---KNYIDLNTESWSSIGGYEKNMTIA 263
F T+ D+ GD L + D + + S G N T+
Sbjct: 932 TTDNHTQTFSYTMSDADGDFSSSTLAVASAASGSTPNASFDGTSGNDS-HSGTTGNDTMQ 990
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G +G+D + G N++ GND+ G +G D S +K +
Sbjct: 991 GNAGDDVLYGHAGDDKLNGGDGNDMLSGGDGNDLLIGGAGHDVLIGGLGSDTFKWSFGDQ 1050
Query: 324 AIIVYDANEHKQDFLSDV 341
A +H DF V
Sbjct: 1051 GTAASPAADHIMDFTPGV 1068
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 7/170 (4%)
Query: 201 SLGNNIYKIEVQQKDSPFIQT-----IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ N+ D+ + + + + + G N T ++ G
Sbjct: 932 TTDNHTQTFSYTMSDADGDFSSSTLAVASAASGSTPNASFDGTSGNDSHSGTTGNDTMQG 991
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + H + + G GND++ G N++ +G+DV G G DTF +
Sbjct: 992 NAGDDVLYGHAGDDKLNGGDGNDMLSGGDGNDLLIGGAGHDVLIGGLGSDTFKWSFGDQG 1051
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ I+ + + D++ L + V+ L +
Sbjct: 1052 TAASPAADHIMDFTPGVGGD--VLDLKDLLVGEHDGSGVSGNLAQFLHFA 1099
Score = 44.3 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 9/197 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA S G+ Y +++ + I +G + L+ + ++ + ++
Sbjct: 888 GATATSSGSE-YALQIDSETPFTYLRIEWTGNSQGIVLSSLDTLRTTDNHTQTFSYTMSD 946
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + + V + GS+ N G S N+ ++GND G++G D + +A
Sbjct: 947 ADGDFSSSTLAVASAASGSTPNASFDGTSGNDSHSGTTGNDTMQGNAGDDVLYGHAGDDK 1006
Query: 316 YKIYRFENAIIVYDANE-----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + D N+ D L +D S + + D
Sbjct: 1007 LNGGDGNDMLSGGDGNDLLIGGAGHDVLIGG---LGSDTFKWSFGDQGTAASPAADHIMD 1063
Query: 371 LIQVIGQDVFESMKHFY 387
+G DV +
Sbjct: 1064 FTPGVGGDVLDLKDLLV 1080
>gi|348021|gb|AAC37543.1| matrilysin [Homo sapiens]
gi|13177712|gb|AAH03635.1| Matrix metallopeptidase 7 (matrilysin, uterine) [Homo sapiens]
gi|60816397|gb|AAX36381.1| matrix metalloproteinase 7 [synthetic construct]
gi|60817901|gb|AAX36443.1| matrix metalloproteinase 7 [synthetic construct]
gi|61358328|gb|AAX41549.1| matrix metalloproteinase 7 [synthetic construct]
gi|61358920|gb|AAX41641.1| matrix metalloproteinase 7 [synthetic construct]
gi|123992912|gb|ABM84058.1| matrix metallopeptidase 7 (matrilysin, uterine) [synthetic
construct]
gi|157928550|gb|ABW03571.1| matrix metallopeptidase 7 (matrilysin, uterine) [synthetic
construct]
gi|261860302|dbj|BAI46673.1| matrix metallopeptidase 7 [synthetic construct]
Length = 267
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 71/215 (33%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W++ + Y+ T + L AL W
Sbjct: 84 KPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRL-------VSKALNMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F + +DI + + + +D + +FD+ +
Sbjct: 137 GKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFM 167
W G G + A HE+GH+LG+ H N YP YG
Sbjct: 197 RWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNG----------------D 240
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
PQ+ + DI +QK+YG S
Sbjct: 241 PQNFKLSQ----------DDIKGIQKLYGKRSNSR 265
>gi|330878915|gb|EGH13064.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 985
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 46/130 (35%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N+ Y + + +D +I + + + ++ G E N
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEAN 390
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I E + G +G D + G + +++ +G D G +G DTF + + Y+
Sbjct: 391 DVITGGAAHELIFGLAGKDTLNGGTGDDILVGGAGADKLSGGAGADTFRFDQLTDSYRTA 450
Query: 320 RFENAIIVYD 329
++ D
Sbjct: 451 TTSATDLLTD 460
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+S++ G I E++ G+ GND ++G ++ +G DV +G +G D
Sbjct: 779 ADSFAINVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAGRDA 838
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ A + + ++ YDA D + D
Sbjct: 839 LYGGADADTFVYSTLTDSYRDYDAGGLTATDTIFDF 874
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 5/118 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 534 TEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLTGGAGADVFVYSSR 593
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y+ Y ++ DF +R+ + + + + + Y + D
Sbjct: 594 LDSYRNYTAGG----PKQSDTIVDFNVAEDRIDLSTIGLRGLGDGSANTI-YLSLNGD 646
>gi|156977658|ref|YP_001448564.1| hypothetical protein VIBHAR_06446 [Vibrio harveyi ATCC BAA-1116]
gi|156529252|gb|ABU74337.1| hypothetical protein VIBHAR_06446 [Vibrio harveyi ATCC BAA-1116]
Length = 959
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 8/152 (5%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + ID + G + T+ + + G +GND + + N+ +GND
Sbjct: 776 GYFADVIDGREGDD-RLYGEGGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVTAGAGND 834
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDVERLRFADQ-- 349
V G G DT + ++ + V + D + VE + +
Sbjct: 835 VVAGGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYS 894
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
R+ L A + L+ +G + +E
Sbjct: 895 SYYKTANNARNTLIGGAGNDRLVGGLGAERYE 926
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 1/148 (0%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L ++ I G E + + +++ G G+DV+ G + N+ +GND +G
Sbjct: 773 LRGGYFADVIDGREGDDRLYGEGGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVTAGAG 832
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + + + + ++H S L S
Sbjct: 833 NDVVAGGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGR 892
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGL 391
Y++ Y+ + + GL
Sbjct: 893 YSSYYKTANNARNTLIGGAGNDRLVGGL 920
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 46/147 (31%), Gaps = 42/147 (28%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSS 275
+Y GGDD L D L GG N LN + + + N +A +++ G +
Sbjct: 791 LYGEGGDDTLEGGQGDDVLDGGAGND-TLNAGAGNDTVTAGAGNDVVAGGLGNDTLHGGT 849
Query: 276 GNDVVIGNSAN----------NVFFESSGND-------------------------VFDG 300
GND V G + N +G+D G
Sbjct: 850 GNDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYYKTANNARNTLIG 909
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIV 327
+G D + Y+ R + +
Sbjct: 910 GAGNDRLVGGLGAERYEFNRGDGQDTI 936
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 15/148 (10%)
Query: 265 HTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++ + GSS +D V GN ++ +GND G G DT + ++
Sbjct: 553 GDEFDNDLFGSSSDDFVYGNKGDDSITVGAGNDFVYGGEGNDTLHGGTGNDRVSGGEGDD 612
Query: 324 AIIVYDANE-----HKQDFLSDVERLRFADQ--CIDSVNVKQRSILEYTASYEDLIQVIG 376
+ V + D + VE + + R+ L A + L+ +G
Sbjct: 613 HLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYYKTANNARNTLIGGAGNDRLVGGLG 672
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ YEF +G+D D +Y
Sbjct: 673 AER-------YEFNRGDGQDTIRDRDVY 693
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 33/120 (27%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G DV+ G ++ + G+D +G G D A +
Sbjct: 764 ILSSAEADELRGGYFADVIDGREGDDRLYGEGGDDTLEGGQGDDVLDGGAGNDTLNAGAG 823
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + N+ L + S + + L G DV
Sbjct: 824 NDTVTAGAGNDVVAGGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLT 883
>gi|117925486|ref|YP_866103.1| hemolysin-type calcium-binding region [Magnetococcus sp. MC-1]
gi|117609242|gb|ABK44697.1| Hemolysin-type calcium-binding region [Magnetococcus sp. MC-1]
Length = 15245
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 219 IQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
++ + D G GDD + L GG+ ++ N +++ G ++T+ + + G+ GN
Sbjct: 13175 VRVLADGGAGDDTILLGSAGGMAVDLEGNN-VLTALAGSTASVTLVGGLGDDQLTGALGN 13233
Query: 278 DVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
D+++G N G+D G SG+D++ + + I I +
Sbjct: 13234 DILVGGRGTNTLTAGGGDDTLYALQGVNRMIGGSGVDSYIFAGVLGVNTIVENSGEISLT 13293
Query: 329 DANEHKQDFLSDV 341
D + D L V
Sbjct: 13294 DFSGGVPDALMSV 13306
>gi|320192908|gb|EFW67548.1| hypothetical protein ECoD_00155 [Escherichia coli O157:H7 str.
EC1212]
Length = 5188
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 4964 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 5017
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 5018 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 5077
Query: 319 YRFENAII 326
+ ++
Sbjct: 5078 GGNGSDVV 5085
>gi|268679433|ref|YP_003303864.1| hypothetical protein Sdel_0798 [Sulfurospirillum deleyianum DSM 6946]
gi|268617464|gb|ACZ11829.1| hypothetical protein Sdel_0798 [Sulfurospirillum deleyianum DSM 6946]
Length = 1538
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+E+ S + G E T+ + + G +GND + GN+ N++ F +GND+ +G +G DT
Sbjct: 1324 SETSSLLSGTENTNTLNGTNENDLMRGYAGNDTLNGNNGNDILFGGAGNDILNGGNGSDT 1383
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ I N D F DSV +
Sbjct: 1384 LDGGVGND---ILNGGNVNDTLDGGAGVDQLYGGNNNDIFVYDSADSVIHGGNGVDTLLF 1440
Query: 367 SYEDLIQVIG 376
S++ + + G
Sbjct: 1441 SHDATVDLSG 1450
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 234 TLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+L+ G +N LN + + + GY N +++ G++GND++ G + N++
Sbjct: 1328 SLLSGTENTNTLNGTNENDLMRGYAGN---------DTLNGNNGNDILFGGAGNDILNGG 1378
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRF--------ENAIIVYDANEHKQDFLSDVERL 344
+G+D DG G D + N I VYD+ + + V+ L
Sbjct: 1379 NGSDTLDGGVGNDILNGGNVNDTLDGGAGVDQLYGGNNNDIFVYDSADSVIHGGNGVDTL 1438
Query: 345 RFA-DQCIDSVNVKQRSI 361
F+ D +D + I
Sbjct: 1439 LFSHDATVDLSGITDGKI 1456
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 8/157 (5%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
+ + S + M I + G + N + T+ + G+D
Sbjct: 1306 TEANGSSASVSEIMSVTISETSSLLSGTENTNTLNGT-NENDLMRGYAGNDTLNGNNGND 1364
Query: 230 LLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+L GG N I LN + S + G N + V +++ G +G D + G + N++
Sbjct: 1365 IL----FGGAGNDI-LNGGNGSDTLDGGVGNDILNGGNVNDTLDGGAGVDQLYGGNNNDI 1419
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
F S + V G +G+DT + + + + I
Sbjct: 1420 FVYDSADSVIHGGNGVDTLLFSHDATVDLSGITDGKI 1456
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 13/129 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ V+ GND+V +SA+ + + ND DG +G DT + + Y I + I
Sbjct: 297 DFVLLGDGNDLVYTDSASPIAYRDDSNDTLVIDGGNGADTVLFGKNASEYTITTTASGSI 356
Query: 327 VYDAN---------EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ N L +VE+L+F D N + +
Sbjct: 357 LVSENVSSDSDGNGIGDVTELRNVEKLQFLDGAYYPYNTAATLSVTTVT--TFVEDASSN 414
Query: 378 DVFESMKHF 386
V + H+
Sbjct: 415 GVGSVVAHY 423
>gi|261379743|ref|ZP_05984316.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria subflava NJ9703]
gi|284797419|gb|EFC52766.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria subflava NJ9703]
Length = 912
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ G++ V ++ + +G ++ G N I + E + + +
Sbjct: 54 NGGDDTVYSNVSYTLPNHVENLVLTG---TANIFGAGNNSNNILIGNEGRNRLNSGCGDD 110
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + G GND + G + N+ +GNDV +G G DT+ + A S I
Sbjct: 111 IVYGGGGNDFINGGEGNDCLFGETGNDTLNGEAGNDVLEGGEGDDTYLFSAKSEQDTIID 170
Query: 321 FENAIIV 327
+ +
Sbjct: 171 NQGHNSI 177
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 36/97 (37%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N I E + + + T+ +++ G GND + G N++ +GN
Sbjct: 343 AGNNSNNILTGNEGRNRLNSGRGDDTVYGMGGNDNLNGGDGNDYLDGGDGNDLINGDAGN 402
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
D+ G +G D A + Y + I N
Sbjct: 403 DILMGGNGKDILKGGAGNDTYIYGDNDTIIDNQGINT 439
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ GS GND +IG S +++ +G D+ +G G DT++ + V+
Sbjct: 259 KTIDGSDGNDHLIGTSGDDIIDGKAGADIMEGRDGNDTYYVDNTKDVVIEQAGGGEDTVF 318
Query: 329 DANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ H VE + I + +IL L G D M
Sbjct: 319 SSISHTAAT--HVENVTLTGSANIFAAGNNSNNILTGNEGRNRLNSGRGDDTVYGMG 373
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 24/57 (42%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G +GND + + ++ +GND +G DT+ + I+ +
Sbjct: 570 DKLYGGNGNDKLYAHVGTDLLDGGAGNDYLEGGEHNDTYVFGKGYGHDTIFDYNFGF 626
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 19/140 (13%)
Query: 193 KIYGAPKG---SLGNNIYKIEVQQKDSPFI-QTIYDSGGDDLLDLTLIGGV--------- 239
IYG + G N K ++ +TI++ G ++T G
Sbjct: 423 YIYGDNDTIIDNQGINTLKFSDGLNNAKLNLKTIHNDDGSQSWEITSDQGSALIQNQIGA 482
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIE----SVVGSSGNDVVIGNSANNVFFES-SG 294
I ++ +S Y ++ + VG++G+D + GN+ NN G
Sbjct: 483 DGSISIDRFQFSD-QTYTAAQFQQAFQALKAKNINFVGTNGDDTLHGNAGNNEIDGGNDG 541
Query: 295 NDVFDGSSGLDTFFYYAPSY 314
D+ G G D ++ +Y
Sbjct: 542 RDILYGHDGDDILREHSETY 561
Score = 41.3 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 7/138 (5%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E TI + ++G+SG+D++ G + ++ GND + + D A
Sbjct: 256 ESGKTIDGSDGNDHLIGTSGDDIIDGKAGADIMEGRDGNDTYYVDNTKDVVIEQAGGGED 315
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED--LIQV 374
++ + L+ + A +++ + D + +
Sbjct: 316 TVFSSISHTAATHVENV---TLTGSANIFAAGNNSNNILTGNEGRNRLNSGRGDDTVYGM 372
Query: 375 IGQDVFES--MKHFYEFG 390
G D + + G
Sbjct: 373 GGNDNLNGGDGNDYLDGG 390
Score = 37.8 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 21/164 (12%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ F TI+ + LDL+ V Y G + TI I V +
Sbjct: 757 NNFNHTIHADSDNSDLDLSHYTSVVEY-----------RGNRSDETITLGRGINIVDTAG 805
Query: 276 GNDVVIGNSANNV--FFE-SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GND + A+N F +SGND F+ G DT + K + + +
Sbjct: 806 GNDTITDPGADNTVIMFGRNSGNDTFNPYGGSDTQVLFKEGLTLKDLQLKTGDDWVLTIK 865
Query: 333 HKQDFLS-------DVERLRFADQCIDSVNVKQRSILEYTASYE 369
D L+ +V+ F + + + ++++
Sbjct: 866 DTGDTLTIHDIANNNVDSFVFGNGKSYTADEISKALITENTQNN 909
>gi|307152895|ref|YP_003888279.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306983123|gb|ADN15004.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 1366
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 59/162 (36%), Gaps = 6/162 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSSIG 254
G GN+ I + Q +Y G D + + G D ++ +I
Sbjct: 950 NGGAGNDT--INPNDPAAGVNQLVYGGAGADSITGGSGADSLFGGLETADQAGDTADTID 1007
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + TI + +S++G GND + GN N+ +G+D DG +G DT P+
Sbjct: 1008 GAGGDDTIYGNLGDDSILGGDGNDSIFGNEGNDNLTGGAGSDTIDGGAGNDTINPNDPAA 1067
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
F A D L ADQ D+ +
Sbjct: 1068 GVNQLVFGGAGADSITGGSGADSLIGGLSPTGADQTGDTADT 1109
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 56/177 (31%), Gaps = 6/177 (3%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIG 254
G + + +I G D L L G D+ I
Sbjct: 850 GNDTINTNDAAAAGNELVFGGAGADSILGGSGADTLIGGLSAAGADQTGDIADT----ID 905
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI + +S+ G +GND + GN N+ + +D +G +G DT P+
Sbjct: 906 GGAGNDTIYGNLGDDSIFGGAGNDSIFGNEGNDNLTGGTDSDTINGGAGNDTINPNDPAA 965
Query: 315 LYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ A D L +E A D+++ Y +D
Sbjct: 966 GVNQLVYGGAGADSITGGSGADSLFGGLETADQAGDTADTIDGAGGDDTIYGNLGDD 1022
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 5/151 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D + + DL I G N ++ + +S+ G +GND
Sbjct: 588 DTLLGGDGNDTI-FGGLQTTDQTGDLADT----IDGGAGNDSLFGNAGNDSLFGGAGNDS 642
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ GN + +GN+ DG +G D A + + I+ A
Sbjct: 643 LFGNDGVDTLVGDAGNNYLDGGTGNDILNASAGAGDTVLGGAGADSILGGAGADSLIGGL 702
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYED 370
D D+++ + Y +D
Sbjct: 703 SATGATQTDDLADTIDGGAGADTIYGNLGDD 733
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 12/183 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD----------LTLIGGVKNYIDLNTESWSSIGGYEKN 259
TI G+D ++ L G + I + + S IGG
Sbjct: 1039 NDNLTGGAGSDTIDGGAGNDTINPNDPAAGVNQLVFGGAGADSITGGSGADSLIGGLSPT 1098
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++ G+ GND + GN ++ F ++G+D G +G D +
Sbjct: 1099 GADQTGDTADTIDGAGGNDTIYGNLGDDSLFGNAGDDSIFGGAGGDNITGGDGADTLFGG 1158
Query: 320 RFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+A + D + ++ + + + + L G
Sbjct: 1159 FSASAAAADQTGDLADTIDGGAGIDIIFGNLGNDSIIGGDGDDSIVGLQGQDTLTGSAGA 1218
Query: 378 DVF 380
D F
Sbjct: 1219 DGF 1221
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 65/193 (33%), Gaps = 11/193 (5%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTE 248
++G + + + + T+ G D + +LIGG+ T+
Sbjct: 735 LFGGTGTNYLDGGTGNDSLNASAGAGDTVLGGAGADSILGGVGADSLIGGLSATGATQTD 794
Query: 249 SWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I G I + +S+ G++GND + GN N+ + ND DG G DT
Sbjct: 795 DLADTIDGAGGADAIYGNLGDDSLFGNAGNDSIFGNEGNDNLTGGTDNDSIDGGVGNDTI 854
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ F A D L ADQ D + ++ A
Sbjct: 855 NTNDAAAAGNELVFGGAGADSILGGSGADTLIGGLSAAGADQTGDIADT-----IDGGAG 909
Query: 368 YEDLIQVIGQDVF 380
+ + +G D
Sbjct: 910 NDTIYGNLGDDSI 922
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 54/180 (30%), Gaps = 8/180 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----LNTESWSS-IGGYEKNMTI 262
TI G+D + L + D LN + I G N TI
Sbjct: 169 GGNDSLVGGEAGDTISGDEGNDTI-LGGLQTSDQTGDTADSLNGGGGNDVIYGNLGNDTI 227
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G ND + G S + G D G G DT + +
Sbjct: 228 LGDIGSDTIFGGRDNDFIDGGSDADSLVGGEGTDTITGGEGNDTILGGLQTSD-QTGDTA 286
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+++ D N+ L + + + K +L + + ++ G D
Sbjct: 287 DSLTGLDGNDVIFGNLGN-DTITGDAGSDTIFGGKDNDVLSGGSENDSVVGGEGSDTING 345
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 72/225 (32%), Gaps = 36/225 (16%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI---------DLN 246
G G+ GN+ I+ +QTI+ + GDDL+ + GG I L
Sbjct: 30 GTINGNGGNDT--IQALGGAVTGVQTIFANQGDDLV--STAGGFPTTIEAYGGQGNDTLI 85
Query: 247 TESWSS-IGGYEKNMTIAQ------------------HTVIESVVGSSGNDVVIGNSANN 287
++S I G E TI +S+ G +GND + GN +
Sbjct: 86 GGNFSDTIYGSEGTDTIVGSGGDDFLFGGLQSGVSQSGDGADSIDGGTGNDQIFGNLGAD 145
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+GND G DT + + I + N+ L + +
Sbjct: 146 TLLGGTGNDSVFGGQDADTISGAGGNDSLVGGEAGDTISGDEGNDTILGGLQTSD--QTG 203
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFG 390
D ++ + ++ IG D F + G
Sbjct: 204 DTADSLNGGGGNDVIYGNLGNDTILGDIGSDTIFGGRDNDFIDGG 248
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 7/127 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGV-------KNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ G+D+L+ + G + I + S IGG +
Sbjct: 654 GDAGNNYLDGGTGNDILNASAGAGDTVLGGAGADSILGGAGADSLIGGLSATGATQTDDL 713
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G +G D + GN ++ F +G + DG +G D+ A + + I+
Sbjct: 714 ADTIDGGAGADTIYGNLGDDSLFGGTGTNYLDGGTGNDSLNASAGAGDTVLGGAGADSIL 773
Query: 328 YDANEHK 334
Sbjct: 774 GGVGADS 780
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 52/184 (28%), Gaps = 18/184 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ TI +GG D + D +L G N SI G E N +
Sbjct: 786 SATGATQTDDLADTIDGAGGADAIYGNLGDDSLFGNAGND---------SIFGNEGNDNL 836
Query: 263 AQHTVIESVVGSSGNDVVIGNSA----NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T +S+ G GND + N A N + F +G D G SG DT +
Sbjct: 837 TGGTDNDSIDGGVGNDTINTNDAAAAGNELVFGGAGADSILGGSGADTLIGGLSAAGADQ 896
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
I A + + + L + + G D
Sbjct: 897 TGDIADTIDGGAGNDTIYGNLGDDSIFGGAGNDSIFGNEGNDNLTGGTDSDTINGGAGND 956
Query: 379 VFES 382
Sbjct: 957 TINP 960
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 69/213 (32%), Gaps = 24/213 (11%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
GG ++ END+ + V S D+ S G + ++ A + G S
Sbjct: 336 GGEGSDTINGGTENDTLVGGVQSGDQSGDTADTISGGTGDDVIFGNLGADSLVGGDNATS 395
Query: 202 LG---NNIYKIEVQQKDSP-----------FIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G + + TI G+D + L G ++
Sbjct: 396 TGTGADTLLGGRDNDIIIGGDGDDSLVGGEGTDTITGGDGNDTIFGGLQSGDQS-----G 450
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ +I G N I + +S++G +GND + G +V + ND G G DT
Sbjct: 451 DTADTISGGAGNDQIFGNLGSDSILGDAGNDTIFGGREADVIDGGADNDSIVGGEGTDTL 510
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + D D ++
Sbjct: 511 LGGDGNDTLV-----GGLQTTDQTGDTADTING 538
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 10/123 (8%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TI G+D + G D ++ S+ G + N I + +++ G +G+
Sbjct: 259 GTDTITGGEGNDTI-----LGGLQTSDQTGDTADSLTGLDGNDVIFGNLGNDTITGDAGS 313
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G N+V S ND G G DT + + D + D
Sbjct: 314 DTIFGGKDNDVLSGGSENDSVVGGEGSDTINGGTENDTLV-----GGVQSGDQSGDTADT 368
Query: 338 LSD 340
+S
Sbjct: 369 ISG 371
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 3/138 (2%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ IY + + +I+ G D + + + + G + T
Sbjct: 1117 DTIYGNLGDDSLFGNAGDDSIFGGAGGDNITGGDGADTLFGGFSASAAAADQTGDLAD-T 1175
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I I+ + G+ GND +IG ++ G D GS+G D F+Y +
Sbjct: 1176 IDGGAGIDIIFGNLGNDSIIGGDGDDSIVGLQGQDTLTGSAGADGFYYQGAAASAVSGAD 1235
Query: 322 ENAIIVYDANEHKQDFLS 339
I ++ D +
Sbjct: 1236 NVDTITDFKAGNEADKIV 1253
Score = 40.1 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 5/150 (3%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D G + I N + S +GG + + T ++++G ND++IG ++
Sbjct: 364 DTADTISGGTGDDVIFGNLGADSLVGG---DNATSTGTGADTLLGGRDNDIIIGGDGDDS 420
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
G D G G DT F S + I A + + +
Sbjct: 421 LVGGEGTDTITGGDGNDTIFGGLQSGDQSGDTAD--TISGGAGNDQIFGNLGSDSILGDA 478
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ +++ A + ++ G D
Sbjct: 479 GNDTIFGGREADVIDGGADNDSIVGGEGTD 508
>gi|189069202|dbj|BAG35540.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 31/157 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + I + T + E R A W L F E
Sbjct: 119 WQHNEITFCIQNYTPKVGEYATYE-------AIRKAFRVWESATPLRFREVPYAYIREGH 171
Query: 76 --------------HSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVW--RYGIGKGT 118
H D G++ + + +FD A+ W R G
Sbjct: 172 EKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGN 231
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ A+HE+GHALGL H + + D EN
Sbjct: 232 DIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|168798055|ref|ZP_02823062.1| large repetitive protein [Escherichia coli O157:H7 str. EC508]
gi|189379302|gb|EDU97718.1| large repetitive protein [Escherichia coli O157:H7 str. EC508]
gi|326345968|gb|EGD69707.1| hypothetical protein ECF_00795 [Escherichia coli O157:H7 str. 1125]
Length = 5188
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 4964 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 5017
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 5018 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 5077
Query: 319 YRFENAII 326
+ ++
Sbjct: 5078 GGNGSDVV 5085
>gi|21242932|ref|NP_642514.1| hemolysin-type calcium-binding protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|21108432|gb|AAM37050.1| hemolysin-type calcium binding protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 2183
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+D ++G + ++V GNDV G +G DT A Y + R + ++ +A
Sbjct: 935 SDDRLVGGAGDDVLSGRGGNDVLSGGAGFDTLAGGAGDDAYLVGRGDGRDVITEA--GGS 992
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D L + AD + + A+Y
Sbjct: 993 DTLRFGADIAAADVRLVRTSSAPADATGRAAAY 1025
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N T+ +++VG +GND ++G + + +G+D G +G D
Sbjct: 53 VSTLTGNDTLDGGVGNDTLVGGNGNDALMGGEGRDTLYGGAGHDTLIGGAGADLLDGGLG 112
Query: 313 SYLYKIYRFENAIIVYDANEHKQD 336
+ Y I + DA E +D
Sbjct: 113 NDTYVIDAADLPEGSSDAAELLRD 136
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 71/211 (33%), Gaps = 13/211 (6%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
++ + + ++ SV S P + F T S I +
Sbjct: 1891 FDAQSQTFKAAANAPLGTYEISV-SAKDPWGAQATQKF--AVTVQSSTITGTSRNDTLTG 1947
Query: 200 GSLGNNIYKIEVQQKDSPFI---QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ + I + + I D+ GD ++ G +++ S+ ++G
Sbjct: 1948 TTGNDTIDGLAGADTMTGLAGDDTYIVDNTGDKAVEAANAGTDTV---MSSVSF-TLGAN 2003
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+N+ +A I + G+ N+ + GN+ NV +G D DG +G DT + Y
Sbjct: 2004 VENLVLAGSGAI-NGTGNELNNRLTGNAGANVLTGGAGADYLDGGAGTDTLAGGLGNDTY 2062
Query: 317 KIYRFENAIIVY--DANEHKQDFLSDVERLR 345
+ R V D D +
Sbjct: 2063 WLARGYGTDTVQENDTTSGNLDIAKFANDVS 2093
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ ++++G G D + G + ++ +G D+ DG G DT+ A
Sbjct: 61 TLDGGVGNDTLVGGNGNDALMGGEGRDTLYGGAGHDTLIGGAGADLLDGGLGNDTYVIDA 120
Query: 312 PS 313
Sbjct: 121 AD 122
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 13/148 (8%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + V +G+D + G+ N+ +GND D G DTFFY
Sbjct: 378 ITGRDGADRIYAGAGDDVVTAGAGDDQIWGDLGNDTIDAGAGNDTVDSGQGRDTFFYSRG 437
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + A D + E L +D V + T +
Sbjct: 438 DGVDRYSAGM-------AAPADGDVIRFKEGLAQSDLMFSRVEDDLLVRVIGTQDRLTVK 490
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFD 400
EFG +GR + F
Sbjct: 491 AAFTSQPLSR----IEFG--DGRAVAFA 512
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 12/157 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-GVKNYIDLNTESWSSIG 254
G + G + I ++ GG L +T G G +L +
Sbjct: 643 GQTQNGSGRTVRFAAGLTPAQVGISSVPGEGGRKDLLVTWAGEGNAGTQELRILGFMDFA 702
Query: 255 GYEKNMTIAQHTVIESVV-----------GSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ + +++ G+ G+D + G ++ +GND DG +G
Sbjct: 703 EGQRGLRFVFDDAPQTLWSWGDVFNRANSGTPGDDALRGTPGDDELRGLAGNDTIDGLAG 762
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
D A + + + +I + D L
Sbjct: 763 NDMLDGGAGADTLRGGDGNDVLIAGEGGAAGSDTLYG 799
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ + + S I T+ ++V G GND + G ++ +
Sbjct: 509 VAFADLALTPGQAQATAGNDSEIHLLPTGDTVDALAGSDTVYGGVGNDTIDGGEGADMLY 568
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+G+D + G +TF A +I ++
Sbjct: 569 GGAGDDALTDARGDNTF--DAGDGNDRITGMGTSV 601
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 31/129 (24%), Gaps = 14/129 (10%)
Query: 273 GSSGNDVVIGNS-----------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
G G+D + G N+ GND G +G D
Sbjct: 35 GGEGDDWLAGEDEHAVDAVSTLTGNDTLDGGVGNDTLVGGNGNDALMGGEGRDTLY-GGA 93
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDV 379
+ ++ A D + + + +L + ++ +
Sbjct: 94 GHDTLIGGAGADLLDGGLGNDTYVIDAADLPEGSSDAAELLRDAGGDDTVMLSGAVSSSR 153
Query: 380 FESMKHFYE 388
+ +
Sbjct: 154 TDKGQDLAM 162
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
D + G + N+ +G D DG +G D +Y R + ++
Sbjct: 1498 AGQDRDELKGGAGNDRLVSYAGLDTMDGGAGNDVLVGG---DIYLFGRGDGRDVIES 1551
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GND ++ + + +GNDV G D + + I + +
Sbjct: 1503 DELKGGAGNDRLVSYAGLDTMDGGAGNDVLVGG---DIYLFGRGDGRDVIESWTGRVSGE 1559
Query: 329 DANE 332
+
Sbjct: 1560 RSQT 1563
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-----YYAPSYLYKIYRFENAII 326
VG+ N+V++GN+ +NV G + +G +G D + YA + + +
Sbjct: 1138 VGNGANNVIVGNAGSNVLDGKEGLERLEGGAGDDIYVDMAGDAYAINKDEIVEQANGGND 1197
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + +VE L D + V S + +S
Sbjct: 1198 TLLLDAKSRSLADNVENLVLVDWTNTTRVVPVDSYYGFQSS 1238
Score = 40.5 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 23/159 (14%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIY--DSGGDDLL--DLTLIGGVKNYIDLNTESWSSIG 254
+G G++IY + I +GG+D L D N +L W++
Sbjct: 1165 EGGAGDDIYVDMAGDAYAINKDEIVEQANGGNDTLLLDAKSRSLADNVENLVLVDWTNTT 1224
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDV---VIGNSANNVFFESS----------------GN 295
+ + +D + GN+ +NV ++ G
Sbjct: 1225 RVVPVDSYYGFQSSSLLYDGRSDDTRVRLSGNALDNVIDATNQGRISTMMMRDRSDAFGG 1284
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
V DG+ G DT Y + + ++ + +
Sbjct: 1285 LVLDGAGGNDTLIGGVEDDFYLVDSAGDKVVETGVDANG 1323
Score = 37.8 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 68/226 (30%), Gaps = 49/226 (21%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWS 251
G LGN+ Y I+ S + + D+GGDD + L+ + + S
Sbjct: 109 GGLGNDTYVIDAADLPEGSSDAAELLRDAGGDDTVMLSGAVSSSRTDKGQDLAMRMGEVS 168
Query: 252 SIGGY--EKNMTIAQHTVIES---------------------------VVGSSGNDVVIG 282
G E T A T++ + G G D +
Sbjct: 169 ERRGLVLENGFTGAFETLVVNGVQVSTARWIRANVTEDKNLTAEAGGKAYGGRGADRLSL 228
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + ++GND+FD + D + + R + V A +
Sbjct: 229 GAGGGMLQGAAGNDIFDIAQARD-----SGGAVLTFERGDGLDTVTGAVSAQTQAARAAN 283
Query: 343 RLRF-----ADQCIDSVNVKQRSILEYTA--SYEDLIQVIGQDVFE 381
F AD + + Y +D++++ G +
Sbjct: 284 VFEFGEGIAADGVALVRKFDGQGMALYLRYGDGDDMVRLDGLSGSD 329
>gi|119358096|ref|YP_912740.1| hemolysin-type calcium-binding region [Chlorobium phaeobacteroides
DSM 266]
gi|119355445|gb|ABL66316.1| Hemolysin-type calcium-binding region [Chlorobium phaeobacteroides
DSM 266]
Length = 2467
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 227 GDDLLD-----LTLIGGVKNYI-DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G+D + TL G V+N I D + +S IG N+ I ++ + ++ G GND +
Sbjct: 493 GNDTVQSKILMYTLPGNVENLILDNGSNVFSGIGNSLSNIIIG-NSFVNNLEGEGGNDYL 551
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G N++ +GND DG +G D + +Y + + I+
Sbjct: 552 YGLEGNDMIRGGAGNDTVDGGAGNDLIEGGSGDDVYVVDNPGDTIV 597
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 67/201 (33%), Gaps = 28/201 (13%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ GDD D+ + + + + + ++G +N+ +
Sbjct: 1376 NDTLDGGVGADSMEGGKGDDTYVVNYSRDVVMERAGEGTDLVQSGTGWTLGDNIENLEL- 1434
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T G+S N+++ GN NN+ GND DG G D + Y + EN
Sbjct: 1435 TGTASTRGTGNSLNNLISGNGGNNILTGGEGNDTLDGGMGSDNMAGGSGDDTYMV--NEN 1492
Query: 324 AIIVYDANEHKQDFLS---------DVERLRFA----------DQCIDSVNVKQRSILEY 364
+ +V + + D + ++E L + D + +L
Sbjct: 1493 SDVVTEYADEGIDLVRSSVSWMLGDNIENLELSGAEDFIGIGNDCDNGITSGSGNDMLTG 1552
Query: 365 TASYEDLIQVIGQDVFESMKH 385
A + L +G+D
Sbjct: 1553 GAGNDTLNGGLGEDRLAGGGD 1573
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +++ G + ND + G + + GND DG G D
Sbjct: 415 VPGTDGSDVIYGYDGDDTLDGGADNDTLYGGAGFDSISGGDGNDTLDGGDGKDVMAGGKG 474
Query: 313 SYLYKIYRFENAIIVYDANEHKQ 335
LY + F+ + D
Sbjct: 475 HDLYVVNDFDEVVEYADEGNDTV 497
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 10/184 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID---LNTESWSSIGGYEKN 259
G++ Y + + T + G D + +L + I+ L S S+ G +
Sbjct: 1114 GDDTYVVNDSLD----VVTEVANEGIDSIQSSLSWLLGANIENLELLGTSDSNGTGNGLD 1169
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I +T +VG++G D ++G + N++ SG D G G DT+ +
Sbjct: 1170 NRITGNTGANMLVGAAGKDTLVGGAGNDILDGGSGADSMAGGVGDDTYVVNYSRDVVMER 1229
Query: 320 RFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E +V D + ++E A+ ++ R + + L +G D
Sbjct: 1230 AGEGTDLVQSGISWTLGDHVENLELTGTANTRGTGNDLGNR--ITGNSGRNTLDGGVGAD 1287
Query: 379 VFES 382
+
Sbjct: 1288 SMAA 1291
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 29/169 (17%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGG------------- 238
+ GN+ ++ + + T+ G+D LD +++GG
Sbjct: 808 SNTKGTGND---LDNRIIGNSGRNTLVGGAGNDTLDGGVGADSMVGGIGDDIYVVNYSLD 864
Query: 239 -----VKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
IDL S ++G +N+ + T G+ ++ + GNS N
Sbjct: 865 VVTENADEGIDLVQSSTGWTLGANLENLEL-TGTANTRGTGNDHDNRITGNSGKNTLTGG 923
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+GND DG +G D+ Y + + ++ +A+E S+V
Sbjct: 924 AGNDTLDGGTGADSMSGGIGDDTY-VVNYSLDVVTENADEGCDRVQSNV 971
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 34/215 (15%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYID----- 244
A GN+ + + + T+ G+D LD ++ G Y+
Sbjct: 898 ANTRGTGND---HDNRITGNSGKNTLTGGAGNDTLDGGTGADSMSGGIGDDTYVVNYSLD 954
Query: 245 -LNTESWSSIGGYEKNMTIAQHTVIESV----------VGSSGNDVVIGNSANNVFFESS 293
+ + + N++ + +E++ G+ ++++ GNS N
Sbjct: 955 VVTENADEGCDRVQSNVSWTLGSNVENLELTGTANTRGTGNELDNLITGNSGRNTLTGGD 1014
Query: 294 GNDVFDGSSGLDTFFYYAPSYLY-------KIYRFENAIIVYDANEHKQDFLSDVERLRF 346
GND DG SG D+ Y + F I + + E L
Sbjct: 1015 GNDTLDGGSGADSMSGGIGDDTYVVNCSLDVVTEFSGEGIDRVQSSTAWTLGGNFENLEL 1074
Query: 347 ADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVF 380
+ +++ + L +G D
Sbjct: 1075 TGTTNTRGMGNELDNLIIGNSGRNTLDGGVGADSM 1109
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 69/189 (36%), Gaps = 19/189 (10%)
Query: 225 SGGDDLLDLTLIG-----GVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGND 278
GDDL ++ G IDL S S+ +N+ + T + G+ ++
Sbjct: 2183 GSGDDLYVVSESGDVVTEYADEGIDLVRSGVSWSLETNFENLEL-IGTANITGTGNELDN 2241
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ GNS NN +GND DG G D+ + +Y ++ +V + DF+
Sbjct: 2242 YLTGNSGNNQLSGRAGNDTLDGGVGTDSMTGGTGNDIY--VVNTSSDVVIEHEGEGDDFV 2299
Query: 339 ---------SDVERL-RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
S+ E L + + +I+ + L + G DV
Sbjct: 2300 LASVNWSLGSNTEYLALIGNGNTNGDGNDFDNIIIGNNGWNTLKGMAGNDVLIGGSAADN 2359
Query: 389 FGLSEGRDI 397
+GRDI
Sbjct: 2360 LTGGDGRDI 2368
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 59/187 (31%), Gaps = 10/187 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEK 258
+G++ Y + + G DL+ ++ N +L ++I G
Sbjct: 1291 AGIGDDTYVVSDILD----VVIEQAGEGTDLVRSSVSWTLGDNVENLELTGTANISGKGN 1346
Query: 259 --NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I +T +VG +G D ++G + N+ G D +G G DT+ +
Sbjct: 1347 EFDNRITGNTGANMLVGYAGKDTLVGGAGNDTLDGGVGADSMEGGKGDDTYVVNYSRDVV 1406
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVI 375
E +V ++E L +++ L
Sbjct: 1407 MERAGEGTDLVQSGTGWTLGD--NIENLELTGTASTRGTGNSLNNLISGNGGNNILTGGE 1464
Query: 376 GQDVFES 382
G D +
Sbjct: 1465 GNDTLDG 1471
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 8/126 (6%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-------K 317
T G+ ++ +IGNS N +GND DG G D+ +Y
Sbjct: 806 GTSNTKGTGNDLDNRIIGNSGRNTLVGGAGNDTLDGGVGADSMVGGIGDDIYVVNYSLDV 865
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIG 376
+ + I + +++E L + + + L G
Sbjct: 866 VTENADEGIDLVQSSTGWTLGANLENLELTGTANTRGTGNDHDNRITGNSGKNTLTGGAG 925
Query: 377 QDVFES 382
D +
Sbjct: 926 NDTLDG 931
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 19/177 (10%)
Query: 225 SGGDDLLDLTLIG-----GVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGND 278
GDDL ++ G IDL S S+ +N+ + T + G+ ++
Sbjct: 1661 GSGDDLYVVSESGDVVTEYADEGIDLVRSGVSWSLETNFENLEL-IGTANITGTGNELDN 1719
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ GN+ N SG+D DG SG+D+ +Y + E+ +V + + D +
Sbjct: 1720 RITGNNGKNTLIGGSGDDTLDGRSGVDSMSGGVGDDVYVVT--ESGDVVTEYADEGIDMV 1777
Query: 339 S---------DVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
++E L S + + + + L +G+D
Sbjct: 1778 QSNVSWTLGANIENLELLGTSNSSGTGNELDNCITGNSEKNTLNGGLGEDRLAGGGD 1834
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 19/177 (10%)
Query: 225 SGGDDLLDLTLIG-----GVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGND 278
GDDL ++ G IDL S S+ +N+ + T + G+ ++
Sbjct: 1922 GSGDDLYVVSESGDVVTEYADEGIDLVRSGVSWSLETNFENLEL-IGTANITGTGNELDN 1980
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ GN+ N SG+D DG SG+D+ +Y + E+ +V + + D +
Sbjct: 1981 RITGNNGKNTLIGGSGDDTLDGRSGVDSMSGGVGDDVYVVT--ESGDVVTEYADEGIDMV 2038
Query: 339 S---------DVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
++E L S + + + + L +G+D
Sbjct: 2039 QSNVSWTLGANIENLELLGTSNSSGTGNELDNCITGNSEKNTLNGGLGEDRLAGGGD 2095
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 54/164 (32%), Gaps = 31/164 (18%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEK 258
G G++ Y + + T Y G DL+ ++ + + I +L + G E
Sbjct: 1480 GGSGDDTYMVNENSD----VVTEYADEGIDLVRSSVSWMLGDNIENL------ELSGAED 1529
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I ++ + S N++ +GND +G G D +Y +
Sbjct: 1530 FIGIGNDC----------DNGITSGSGNDMLTGGAGNDTLNGGLGEDRLAGGGDDDVYVV 1579
Query: 319 ----------YRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
++ + D + ++E L AD
Sbjct: 1580 DNHFDIVMEHTDEGIDLVRSSISWTLGDHVENLELLGTADDSGT 1623
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 19/201 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL------LDLTLIGGVKNYIDLNTES 249
G + G+ ++ GDD LD+ + + + +
Sbjct: 1006 GRNTLTGGDG----NDTLDGGSGADSMSGGIGDDTYVVNCSLDVVTEFSGEGIDRVQSST 1061
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++GG +N+ + T +G+ ++++IGNS N G D G G DT+
Sbjct: 1062 AWTLGGNFENLEL-TGTTNTRGMGNELDNLIIGNSGRNTLDGGVGADSMLGGQGDDTYVV 1120
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCID-------SVNVKQRSI 361
+ E + + + ++E L +D ++
Sbjct: 1121 NDSLDVVTEVANEGIDSIQSSLSWLLGANIENLELLGTSDSNGTGNGLDNRITGNTGANM 1180
Query: 362 LEYTASYEDLIQVIGQDVFES 382
L A + L+ G D+ +
Sbjct: 1181 LVGAAGKDTLVGGAGNDILDG 1201
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 67/188 (35%), Gaps = 10/188 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL---TLIGGVKNYIDLNTESWSSIGG 255
+G G+++Y ++ I +++ G DL+ +G +DL + ++ G
Sbjct: 579 EGGSGDDVYVVD---NPGDTIVELFNE-GVDLVRSEVSWTLGSHLENLDLPGNANNNGSG 634
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I ++ S++G +GND + G ++ +G D G G D F A + L
Sbjct: 635 NTLDNRITGNSGKNSLMGGAGNDTLFGAEGDDTLEGGTGADSMAGGMGNDLFI--ADTIL 692
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQV 374
+ I + + VE L + + + + L
Sbjct: 693 DVVMEQAEEGIDLVRSNVSWTLSAHVEHLELLGTASTCGMGNELDNRITGNSGRNTLDGG 752
Query: 375 IGQDVFES 382
+G D
Sbjct: 753 VGADSMSG 760
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 2/125 (1%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
++++IGN+ N +GNDV G S D ++ ++ I ++ +
Sbjct: 2329 FDNIIIGNNGWNTLKGMAGNDVLIGGSAADNLTGGDGRDIFLYNSVSDSSI--NSADVIT 2386
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
DF +++ + +S+ +S D GQ F+S+
Sbjct: 2387 DFTGGADKIDLSGIDANSIEEGNQSFDSVILDGSDTFYAQGQLRFDSVTGILYGNTDNDT 2446
Query: 396 DITFD 400
F
Sbjct: 2447 APEFS 2451
Score = 44.0 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 18/149 (12%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF----------DGS 301
++ G N T+ +S+ G GND + G +V G+D++
Sbjct: 432 TLDGGADNDTLYGGAGFDSISGGDGNDTLDGGDGKDVMAGGKGHDLYVVNDFDEVVEYAD 491
Query: 302 SGLDT-----FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQCIDS 353
G DT Y P + + + + + + V L
Sbjct: 492 EGNDTVQSKILMYTLPGNVENLILDNGSNVFSGIGNSLSNIIIGNSFVNNLEGEGGNDYL 551
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ ++ A + + G D+ E
Sbjct: 552 YGLEGNDMIRGGAGNDTVDGGAGNDLIEG 580
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ ++ + GNS N G D G G DT+ + + E V
Sbjct: 733 GNELDNRITGNSGRNTLDGGVGADSMSGGIGDDTYVVDNSLDVVAEFVGEGCDQVRSNGS 792
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ E L + + + L+ G D +
Sbjct: 793 WMLG--GNFENLELLGTSNTKGTGNDLDNRIIGNSGRNTLVGGAGNDTLDG 841
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 78/259 (30%), Gaps = 55/259 (21%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
+ +D+ + + ++I ++ + + GN ++ + + + + G D
Sbjct: 1132 NEGIDSIQSSLSWLLGANIENLELLGTSDSNGTGN---GLDNRITGNTGANMLVGAAGKD 1188
Query: 230 LLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTIAQ------------------------ 264
L +GG N I D + + S GG + +
Sbjct: 1189 TL----VGGAGNDILDGGSGADSMAGGVGDDTYVVNYSRDVVMERAGEGTDLVQSGISWT 1244
Query: 265 -HTVIESVVG-------SSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+E++ +GND+ + GNS N G D G DT+
Sbjct: 1245 LGDHVENLELTGTANTRGTGNDLGNRITGNSGRNTLDGGVGADSMAAGIGDDTYVVSDIL 1304
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR----------SILE 363
+ E +V + +VE L S + ++L
Sbjct: 1305 DVVIEQAGEGTDLVRSSVSWTLGD--NVENLELTGTANISGKGNEFDNRITGNTGANMLV 1362
Query: 364 YTASYEDLIQVIGQDVFES 382
A + L+ G D +
Sbjct: 1363 GYAGKDTLVGGAGNDTLDG 1381
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 70/229 (30%), Gaps = 33/229 (14%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNN-----IYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ + ++I ++ + + GN E + + GGDD + +
Sbjct: 2042 VSWTLGANIENLELLGTSNSSGTGNELDNCITGNSEKNTLNGGLGEDRLAGGGDDDVYV- 2100
Query: 235 LIGGVKNYID-LNTESWSSIGGYEKNMTIAQHTVIESV-VGSSGNDVVIGNSANNVFFES 292
V N+ D + + I +++ +E++ + + +D GN +N +
Sbjct: 2101 ----VDNHFDTVMEHTDEGIDLVRSSISWTLGDHVENLELLGTADDSGTGNELDNRITGN 2156
Query: 293 SGN------------------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SGN D G SG D + + Y E +V
Sbjct: 2157 SGNNMLTGGDGDDILDGGSGSDSMAGGSGDDLYVVSESGDVVTEYADEGIDLVRSGVSWS 2216
Query: 335 QDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + E L I + + L + L G D +
Sbjct: 2217 LET--NFENLELIGTANITGTGNELDNYLTGNSGNNQLSGRAGNDTLDG 2263
>gi|153836909|ref|ZP_01989576.1| putative biofilm-associated surface protein [Vibrio parahaemolyticus
AQ3810]
gi|149749867|gb|EDM60612.1| putative biofilm-associated surface protein [Vibrio parahaemolyticus
AQ3810]
Length = 2335
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +++ QQ D F+ + D G ++ + + D+ + G
Sbjct: 2107 GSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLTLNDSGTDIAQTERHASVG 2166
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +I I+ ++G +G D + G + +++ GND+ G G D
Sbjct: 2167 DEFANSITGGESIDILLGQAGEDTLSGGAGDDILVGGLGNDILTGGLGSDILTGGEGIDT 2226
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++ + + + +DF D ++L +D
Sbjct: 2227 FTFTQE--SLDMTSSRDVIKDFRLDEDKLDLSD 2257
>gi|124026802|ref|YP_001015917.1| hypothetical protein NATL1_20971 [Prochlorococcus marinus str.
NATL1A]
gi|123961870|gb|ABM76653.1| Hypothetical protein NATL1_20971 [Prochlorococcus marinus str.
NATL1A]
Length = 393
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 102/272 (37%), Gaps = 41/272 (15%)
Query: 7 VYTTERI-ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
Y ++I L D+Y+ N I YK ++ D + + R +
Sbjct: 29 SYYIDKIEGTQYL-DKYYINSGISYKESNY----ITLDSRLHSIEEKSFLRSVFRRLDEE 83
Query: 66 VDLTFEETS--IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK------G 117
+DL F E S SDI N+ + + + + A + G
Sbjct: 84 LDLDFFEMSHNNGSDIDIFHVNSSSIFDTNTIGQAIKQEHQSGAWWELFWKDSDELKKFG 143
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
++ + +HEIGHALGL HP + D +N + ++MSY
Sbjct: 144 SLEKNTIIHEIGHALGLAHPFN----------DPFNKNYTTQDTIMSYNRGPS------- 186
Query: 178 GYCATPMVSDIVAVQKIY------GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
G+ D++A++ I+ G + +N YK + DS FI++ G++L+
Sbjct: 187 GWNEWFSSIDLLALKSIWKREDDLGIIEYENPSNSYKFIRENNDSLFIKSEI---GNELI 243
Query: 232 D-LTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
D + + +++N + S + I
Sbjct: 244 DGIQNLHFSDQILNVNEDILSVFNELKGIDHI 275
>gi|15829796|ref|NP_308569.1| hypothetical protein ECs0542 [Escherichia coli O157:H7 str. Sakai]
gi|13360000|dbj|BAB33965.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|326341256|gb|EGD65048.1| Large repetitive protein [Escherichia coli O157:H7 str. 1044]
Length = 5291
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 5067 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 5120
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 5121 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 5180
Query: 319 YRFENAII 326
+ ++
Sbjct: 5181 GGNGSDVV 5188
>gi|300866945|ref|ZP_07111617.1| hypothetical protein OSCI_3180021 [Oscillatoria sp. PCC 6506]
gi|300335049|emb|CBN56779.1| hypothetical protein OSCI_3180021 [Oscillatoria sp. PCC 6506]
Length = 305
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 10/143 (6%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ G N L + + I G N I + +SV+G+ G D + G N+
Sbjct: 7 TPSFDFLQGTLNNDTLRGLAGNDTIQGLGGNDLIFGNQDSDSVIGNEGADTLFGGQGNDT 66
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
F+ S GND+ +G G D + + ++ ++ A L AD
Sbjct: 67 FYGSEGNDIINGDRGQDFLIGGEGTDILTGGVGDDLFVLDTAGASS---------LADAD 117
Query: 349 QCIDSVNVKQRSILEYTASYEDL 371
+ D N R +L + DL
Sbjct: 118 KITDFGNGNDRLVLTGGLKFNDL 140
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 4/128 (3%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ D + G N+ +GND G G D F + E A ++
Sbjct: 3 NIDGTPSFDFLQGTLNNDTLRGLAGNDTIQGLGGNDLIFG--NQDSDSVIGNEGADTLFG 60
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL--IQVIGQDVFESMKHFY 387
+ + S+ + D+ D + + + + +DL + G
Sbjct: 61 GQGNDTFYGSEGNDIINGDRGQDFLIGGEGTDILTGGVGDDLFVLDTAGASSLADADKIT 120
Query: 388 EFGLSEGR 395
+FG R
Sbjct: 121 DFGNGNDR 128
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 19/135 (14%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYLYKIYRFEN 323
G+ ND + G + N+ GND+ G+ G DT F + + N
Sbjct: 15 GTLNNDTLRGLAGNDTIQGLGGNDLIFGNQDSDSVIGNEGADTLFGGQGNDTFY-GSEGN 73
Query: 324 AIIVYDANEH------KQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
II D + D L+ + L D S I ++ + L+ +
Sbjct: 74 DIINGDRGQDFLIGGEGTDILTGGVGDDLFVLDTAGASSLADADKITDFGNGNDRLV-LT 132
Query: 376 GQDVFESMKHFYEFG 390
G F + F G
Sbjct: 133 GGLKFNDLDIFLTEG 147
>gi|114571026|ref|YP_757706.1| hypothetical protein Mmar10_2480 [Maricaulis maris MCS10]
gi|114341488|gb|ABI66768.1| hypothetical protein Mmar10_2480 [Maricaulis maris MCS10]
Length = 143
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYD 493
F EY+ + D+ +A + V DHF G +EGR + YL
Sbjct: 42 TSAEFDEDEYVQRNPDVGDAISRG--RVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNP 99
Query: 494 DLRNVF-GSDRGAAARHYITHGVKEGR 519
D+ F D + H+ G EGR
Sbjct: 100 DIAAAFESGDIVNVSAHFHETGYAEGR 126
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y+ D+ + R A A H++ G +EGR+ + EY++ + D+ AF
Sbjct: 46 FDEDEYVQRNPDVGDAISRGRVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNPDIAAAF 105
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRF 480
+ HF G EGR
Sbjct: 106 ESGDIVNVSA--HFHETGYAEGRV 127
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
FD Y+ D+ + R A A H++ G +EGR+ + EY++ + D+
Sbjct: 43 SAEFDEDEYVQRNPDVGDAISRGRVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNPDIA 102
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGR 563
AF + + HF GY EGR
Sbjct: 103 AAFESGDIVNVSA--HFHETGYAEGR 126
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDITF--DSYLYLGSYDD 410
+ EY D+ I + S + HF G EGRD + YL D
Sbjct: 41 ATSAEFDEDEYVQRNPDVGDAISRGRVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNPD 100
Query: 411 LRNVFGS-DRGAAARHYITHGVKEGR 435
+ F S D + H+ G EGR
Sbjct: 101 IAAAFESGDIVNVSAHFHETGYAEGR 126
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF--NPDLYLTSYD 577
F EY+ + D+ +A + V + DHF G++EGR + YL+
Sbjct: 42 TSAEFDEDEYVQRNPDVGDAISRG--RVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNP 99
Query: 578 DLWNVFGS-DRSAAAQHYITHGMKEGR 603
D+ F S D + H+ G EGR
Sbjct: 100 DIAAAFESGDIVNVSAHFHETGYAEGR 126
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGI 607
S F+ D Y+ D+ + R A A H++ G +EGR +
Sbjct: 43 SAEFDEDEYVQRNPDVGDAISRGRVASALDHFLRQGFQEGRDYSL 87
>gi|2624991|gb|AAB86602.1| matrix metalloproteinase-14 [Mus musculus]
Length = 581
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EXIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|6685346|sp|O70138|MMP8_MOUSE RecName: Full=Neutrophil collagenase; AltName: Full=Collagenase 2;
AltName: Full=Matrix metalloproteinase-8; Short=MMP-8;
Flags: Precursor
gi|3025475|gb|AAC12707.1| neutrophil collagenase [Mus musculus]
Length = 465
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 61/209 (29%), Gaps = 51/209 (24%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
D LL W++ + Y T ++ + A WS
Sbjct: 93 VPDSGDFLLTPGSPKWTHTNLTYWIINHTPQLSRAEV-------KTAIEKAFHVWSVASP 145
Query: 68 LTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYG 113
LTF E +DI +N P + +FD + W
Sbjct: 146 LTFTEILQGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWT-Q 204
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
K L A HE GH+LGL H YP Y Y S +Y +PQD
Sbjct: 205 DSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSLPQD-- 252
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q IYG
Sbjct: 253 --------------DINGIQTIYGPSDNP 267
>gi|171057323|ref|YP_001789672.1| Na-Ca exchanger/integrin-beta4 [Leptothrix cholodnii SP-6]
gi|170774768|gb|ACB32907.1| Na-Ca exchanger/integrin-beta4 [Leptothrix cholodnii SP-6]
Length = 1415
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 81/221 (36%), Gaps = 20/221 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI 253
KG GN+ Y ++S T + G+D + + TL ++N + + S
Sbjct: 393 KGGAGNDTY----IAEESGGQITEEAASGNDTIISYLSNYTLSSTIENLVLGGVANISGT 448
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E N T+ +T ++ G+ GND + G + N+ +G D G +G DT+ Y +
Sbjct: 449 GSAEAN-TLTGNTGNNTLNGAGGNDTIYGGAGNDSLTGGTGTDSLLGGAGDDTYTYDSGD 507
Query: 314 YLYKIYRFENAII------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQR--SILEYT 365
+ + N I + L+ + + + + ++++
Sbjct: 508 VIVEGLNEGNDTILSAVSLTLAVANVEGITLTGADNVNATGDGLANTLTGNTGNNVMDGG 567
Query: 366 ASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLY 404
+ L G D V ++ G G D S Y
Sbjct: 568 VGADSLAGGQGDDTYVVDNAGDVITEGAGAGTDTVQASITY 608
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 87/274 (31%), Gaps = 34/274 (12%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ Y ++ + T G D + ++ + ++ +N+T+
Sbjct: 1124 GDDTYVVDNAGD----VITEGAGAGTDTVQASITYSLAGLANV------------ENITL 1167
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G++ + VIGN+ N +GND G +G DT +Y +
Sbjct: 1168 TGSAAI-NATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMVGGLGDDVYYVDAAG 1226
Query: 323 NAIIVYDANEHKQDFL---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLI 372
+ +V + D + S+VE L + ++L A +L
Sbjct: 1227 D--VVTEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLT 1284
Query: 373 QVIGQDVFESMK--HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH--YIT 428
+G D G+ F+ L S D + F + A + +
Sbjct: 1285 GGLGNDTLNGAAGNDVLNGGVGSDL-FVFNGTLNAASNVDTISDFSAGDRIALDNDIFSA 1343
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G N +F A A DL
Sbjct: 1344 LGAAGTLNSSSFYAGAGFVESTSAAQAAGVYYDL 1377
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 64/235 (27%), Gaps = 21/235 (8%)
Query: 198 PKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ IY ++ GDD T G LN + + +
Sbjct: 466 NGAGGNDTIYGGAGNDSLTGGTGTDSLLGGAGDDTY--TYDSGDVIVEGLNEGNDTILSA 523
Query: 256 YEKNMTIAQHTVIE-------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ +A I + G + + GN+ NNV G D G G DT+
Sbjct: 524 VSLTLAVANVEGITLTGADNVNATGDGLANTLTGNTGNNVMDGGVGADSLAGGQGDDTYV 583
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTAS 367
+ V + + L++VE + I++ + + A
Sbjct: 584 VDNAGDVITEGAGAGTDTVQASITYSLAGLANVENITLTGSAAINATGNALANRVIGNAG 643
Query: 368 YEDLIQVIGQDVFESMK--HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L+ G D GL D Y+ + D+
Sbjct: 644 ANRLVGDAGNDTLGGGAGNDTMVGGLG-------DDVYYVDAAGDVVTEVAGQGT 691
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 29/192 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ Y ++ + T G D + ++ + ++ +N+T+
Sbjct: 578 GDDTYVVDNAGD----VITEGAGAGTDTVQASITYSLAGLANV------------ENITL 621
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G++ + VIGN+ N +GND G +G DT +Y +
Sbjct: 622 TGSAAI-NATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMVGGLGDDVYYVDAAG 680
Query: 323 NAIIVYDANEHKQDFL---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLI 372
+ +V + D + S+VE L + ++L A +L
Sbjct: 681 D--VVTEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLT 738
Query: 373 QVIGQDVFESMK 384
+G D
Sbjct: 739 GGLGNDTLNGGA 750
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 29/192 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ Y ++ + T G D + ++ + ++ +N+T+
Sbjct: 760 GDDTYVVDNAGD----VITEGAGAGTDTVQASITYSLAGLANV------------ENITL 803
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G++ + VIGN+ N +GND G +G DT +Y +
Sbjct: 804 TGSAAI-NATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMVGGLGDDVYYVDAAG 862
Query: 323 NAIIVYDANEHKQDFL---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLI 372
+ +V + D + S+VE L + ++L A +L
Sbjct: 863 D--VVTEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLT 920
Query: 373 QVIGQDVFESMK 384
+G D
Sbjct: 921 GGLGNDTLNGGA 932
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 29/192 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ Y ++ + T G D + ++ + ++ +N+T+
Sbjct: 942 GDDTYVVDNAGD----VITEGAGAGTDTVQASITYSLAGLANV------------ENITL 985
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G++ + VIGN+ N +GND G +G DT +Y +
Sbjct: 986 TGSAAI-NATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMVGGLGDDVYYVDAAG 1044
Query: 323 NAIIVYDANEHKQDFL---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLI 372
+ +V + D + S+VE L + ++L A +L
Sbjct: 1045 D--VVTEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLT 1102
Query: 373 QVIGQDVFESMK 384
+G D
Sbjct: 1103 GGLGNDTLNGGA 1114
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 1/110 (0%)
Query: 270 SVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++G +G ND + G + ++V + +D G +G DT+ +
Sbjct: 363 NILGGTGYNDSLTGGAGDDVLDGRALDDTMKGGAGNDTYIAEESGGQITEEAASGNDTII 422
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + I + + L L G D
Sbjct: 423 SYLSNYTLSSTIENLVLGGVANISGTGSAEANTLTGNTGNNTLNGAGGND 472
>gi|327269110|ref|XP_003219338.1| PREDICTED: collagenase 3-like [Anolis carolinensis]
Length = 473
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 57/188 (30%), Gaps = 47/188 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
WS+ + Y+ T ++ R A WS V L F S +DI
Sbjct: 114 WSHNNLTYRIVNYTPDLKKSEV-------DRAFRKAFKVWSDVTPLNFTRIRSGIADIMI 166
Query: 82 ISSN------NGYVCTPRYDSRYFM-------EINFDKADVWRYGIGKGTILSHNALHEI 128
+ + F + +FD+ ++W G L A HE+
Sbjct: 167 SFGRKEHGDFYPFDGPSGLLAHAFPPGPNTGGDAHFDEDELWSTDSN-GYNLFIVAAHEL 225
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + V +Y ++ D+
Sbjct: 226 GHSLGLEHSTDPGA---------------LMYPVYTYTGNTGFLLP----------DDDV 260
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 261 QGIQTLYG 268
>gi|148652894|ref|YP_001279987.1| putative outer membrane adhesin-like protein [Psychrobacter sp.
PRwf-1]
gi|148571978|gb|ABQ94037.1| putative outer membrane adhesin like proteiin [Psychrobacter sp.
PRwf-1]
Length = 5098
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ +T + T + +G GND+ G++ +++ +G+D G +G D
Sbjct: 4893 DSSDQDVALTYSGGTGDDIFIGGKGNDIFNGDAGDDILSGGAGHDKLYGGAGNDYLDGGT 4952
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
Y N +IVY + + ++ L F
Sbjct: 4953 GFD-YLSGGEGNDVIVYAPDNLSMNGGGGIDTLLF 4986
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 44/138 (31%), Gaps = 22/138 (15%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
AP ++ D T SGG D IGG N I G
Sbjct: 4878 APTVVFRGTTGDDKLDSSDQDVALTY--SGG--TGDDIFIGGKGNDI---------FNGD 4924
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTF 307
+ ++ + + G +GND + G + + GNDV +G G+DT
Sbjct: 4925 AGDDILSGGAGHDKLYGGAGNDYLDGGTGFDYLSGGEGNDVIVYAPDNLSMNGGGGIDTL 4984
Query: 308 FYYAPSYLYKIYRFENAI 325
+ Y + +
Sbjct: 4985 LFNRDDYTLDFDKISASA 5002
>gi|126735754|ref|ZP_01751499.1| putative secreted calcium-binding protein [Roseobacter sp. CCS2]
gi|126714941|gb|EBA11807.1| putative secreted calcium-binding protein [Roseobacter sp. CCS2]
Length = 731
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 56/175 (32%), Gaps = 14/175 (8%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
I GDD++D D E + +GG + +
Sbjct: 566 TMVGGAGSDVIVGQEGDDMIDGGSGRSTITSSD-RLEDFDQVGGQNGDF----------L 614
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G GND + GNS N++ F GND G G DTF + + + ++ D
Sbjct: 615 FGGEGNDQIHGNSGNDLLFGGEGNDQLWGGGGFDTFVFKEGNDQIHDFTHGVDTLMLDEA 674
Query: 332 EHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
LSDV + + D + L ++Q + + +
Sbjct: 675 LLDGRELSDVVRQDTMNEVDSTVFDFGNGNTLTLHGEFDLGAILQSVEMNQVGDV 729
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 20/122 (16%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA--------------------NNVFF 290
S G T+ + +VG G+D++ G S + F
Sbjct: 556 SMFIGGSTAETMVGGAGSDVIVGQEGDDMIDGGSGRSTITSSDRLEDFDQVGGQNGDFLF 615
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND G+SG D F + + + + N+ DF V+ L +
Sbjct: 616 GGEGNDQIHGNSGNDLLFGGEGNDQLWGGGGFDTFVFKEGNDQIHDFTHGVDTLMLDEAL 675
Query: 351 ID 352
+D
Sbjct: 676 LD 677
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 3/131 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I +G S + ++G + ++V G+D+ DG SG T + +N +
Sbjct: 555 ISMFIGGSTAETMVGGAGSDVIVGQEGDDMIDGGSGRSTITSSDRLEDFDQVGGQNGDFL 614
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + Q + L F + D + D I V M
Sbjct: 615 FGGEGNDQIHGNSGNDLLFGGEGNDQLWGGGGFDTFVFKEGNDQIHDFTHGVDTLM---L 671
Query: 388 EFGLSEGRDIT 398
+ L +GR+++
Sbjct: 672 DEALLDGRELS 682
>gi|329764725|ref|ZP_08256320.1| NHL repeat-containing protein [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138775|gb|EGG43016.1| NHL repeat-containing protein [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 500
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
P I GGDD + D + GG N I + I G + N I+ +
Sbjct: 375 GGPGNDKINGGGGDDKIQGNEGDDKISGGKGNDIISGGDGDDKINGGKDNDMISGGLGND 434
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
V G+ G+D + G+ N+ GND DG +G++
Sbjct: 435 KVHGNQGDDTITGDEGNDRLHGGKGNDTIDGGTGINRCNGGQGINTLS 482
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 11/146 (7%)
Query: 199 KGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KG+ GN++ Y+ + + I G+D ++ GG + I N I G
Sbjct: 347 KGTNGNDLIIGYEGDDKIDGKKGNDCIIGGPGNDKING---GGGDDKIQGNEGDDK-ISG 402
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I+ + + G ND++ G N+ + G+D G G D +
Sbjct: 403 GKGNDIISGGDGDDKINGGKDNDMISGGLGNDKVHGNQGDDTITGDEGNDRLHGGKGNDT 462
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDV 341
I + LS+
Sbjct: 463 ID----GGTGINRCNGGQGINTLSNC 484
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I + G+D L G N + + E I G + N I + + G G+D +
Sbjct: 337 IDGTAGNDKLK----GTNGNDLIIGYEGDDKIDGKKGNDCIIGGPGNDKINGGGGDDKIQ 392
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN ++ GND+ G G D + + + + D ++
Sbjct: 393 GNEGDDKISGGKGNDIISGGDGDDKINGGKDNDMISGGLGNDKV----HGNQGDDTITGD 448
Query: 342 E 342
E
Sbjct: 449 E 449
>gi|238898291|ref|YP_002923972.1| putative RTX-family protein-12 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466050|gb|ACQ67824.1| putative RTX-family protein-12 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 505
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 55/145 (37%), Gaps = 11/145 (7%)
Query: 200 GSLGNNIYKIEVQQ--KDSPF-----IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ GN++ ++ D+ F ++ D + LDL + G N ++ +
Sbjct: 245 ATSGNDVVRLSNAAVLPDNTFRSLEGHDSVID---ESDLDLKVYAGTGND-NVLVGRDRT 300
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N T + + G +G+D + G N+ ++GND +G G DT+ Y
Sbjct: 301 DKARKGNKTFYGEAGDDFLAGGAGSDHLYGGIGNDTLQGNTGNDRLEGGEGDDTYLYTVG 360
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
I ++ +QD
Sbjct: 361 HGNDTIKEIGGNDVLVLLGVTEQDV 385
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 18/135 (13%)
Query: 225 SGGDDLLDLTLIGGV-KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS-------- 275
+ G+D++ L+ + N S I + ++ + T ++V+
Sbjct: 246 TSGNDVVRLSNAAVLPDNTFRSLEGHDSVIDESDLDLKVYAGTGNDNVLVGRDRTDKARK 305
Query: 276 ---------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G+D + G + ++ + GND G++G D Y
Sbjct: 306 GNKTFYGEAGDDFLAGGAGSDHLYGGIGNDTLQGNTGNDRLEGGEGDDTYLYTVGHGNDT 365
Query: 327 VYDANEHKQDFLSDV 341
+ + + L V
Sbjct: 366 IKEIGGNDVLVLLGV 380
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGN 295
GV +I N E +S I E+ + + I +G +G ND + G+ +NV + GN
Sbjct: 50 NGVIEFIQKNPEGYSEINVGEQKTVLPK--WITLSLGDTGYNDKIEGDDTDNVLSSTLGN 107
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
D+ G +G D + + + K +N +
Sbjct: 108 DLLKGGAGSDGYQIHHTPQIKKTITIDNEDKTARPDTD 145
>gi|144899715|emb|CAM76579.1| Autotransporter adhesin [Magnetospirillum gryphiswaldense MSR-1]
Length = 3627
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 33/227 (14%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----LNTESWSSIGGYE------ 257
+++ + T+ S G+D + L G +D ++ + + +
Sbjct: 1839 QLDDTVIGGEGVDTLVASSGNDAIFLDAASG-GARLDGIEVIDAGAGNDVVDLTSDRFDY 1897
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+TI + + + S+G+D +IG + N+ +G+DV G G DT
Sbjct: 1898 GNVTIDGGSGNDVLWSSAGDDTLIGGTGNDTLNAGAGDDVLLGGDGNDTIIVDKDESAGD 1957
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + A Q ++V + + + + Q
Sbjct: 1958 VVDGGSGTDTLRVE-------------LTAGQYTEAVRDELLEFNAFASDPANAGQSFTF 2004
Query: 378 DVFESMKHFYEFGLS---EGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
D ++ GLS G I L S D+ D+ A
Sbjct: 2005 DSLGGLQVTNMEGLSVEVNGTPIN------LNSPPDVVEAAVVDQTA 2045
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 29/206 (14%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL------IGGVKNYIDLNTE 248
Y G+ + + + T G D L ++ IG V+ +
Sbjct: 3287 YQDQGGAARDGTDHTVDSNGLNDTLDTYIGGSGHDTLTMSDGNDAIWIGNVQGVEVIQAG 3346
Query: 249 SWSSI-------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + + G ++T+ + +++ + G+DV+IG S N ++GND F G
Sbjct: 3347 AGNDVVDMNYSDGTSYGDLTVDGGSGNDAIFTNDGDDVLIGGSGTNYLSGNAGNDTFIGG 3406
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----------------DFLSDVERLR 345
SG D A + + VY D S +E +
Sbjct: 3407 SGSDAMHGGAGADTVDYSDSATGVNVYLGAGDGNGYSGSGGVGNSGDAQGDTYSGIENVV 3466
Query: 346 FADQCIDSVNVKQRSILEYTASYEDL 371
+ S+ + A +
Sbjct: 3467 GSAHDDYVYGSASGSVADLGAGNDTF 3492
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSI 253
Y G G + + + + + + D+ D+T D + + S S++
Sbjct: 2938 YTVSDGQGGTSTATVNLTVDSDGINENVSYTIDADIGDVTGAANTSTDYDGSGSASSSTV 2997
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G N + ++V G +GND + G S N+ SG D G SG D
Sbjct: 2998 TGTSGNDSKYGGAGNDTVDGGAGNDKLYGGSGNDSVVGGSGTDTLFGGSGNDHL 3051
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 65/206 (31%), Gaps = 9/206 (4%)
Query: 200 GSLGNNIYKIEVQQKDS-PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + + V+ D T D+ G D +G + D SS +
Sbjct: 1700 TDNDDGTWTLSVEDLDGLQLTVTQVDADGFD------LGVSVSTTDGTDVELSSDSLHVS 1753
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A + + G +G+D V G N+ +G DV +G +G D F A
Sbjct: 1754 FTGSAAD-GNDVLSGGTGDDTVFGGGGNDTISGGAGTDVLNGGAGNDVFTMAAGEDGTWG 1812
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + QD +S + D I V + L G
Sbjct: 1813 GGTGAKDVGDKSTSGTQDVVSVGGMNQLDDTVIGGEGVDTLVASSGNDAI-FLDAASGGA 1871
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLY 404
+ ++ ++ D+T D + Y
Sbjct: 1872 RLDGIEVIDAGAGNDVVDLTSDRFDY 1897
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 5/93 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + DL N ++ ++V G +GND + + ++
Sbjct: 3472 DYVYGSASGSVADLGAG-----NDTFDNTEVSSVVKSDTVDGGAGNDTIWTGNGDDTLIG 3526
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+G+D G +G DTF + S + +
Sbjct: 3527 GAGDDQLYGEAGSDTFLFDFGSGHDTVNGGGGS 3559
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 53/176 (30%), Gaps = 42/176 (23%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNTESWSSIGGYE 257
G+ GN+ + ++ G D +D + GV Y+ + S G
Sbjct: 3395 SGNAGNDTF------IGGSGSDAMHGGAGADTVDYSDSATGVNVYLGAGDGNGYSGSGGV 3448
Query: 258 KNMTIAQHTV---IESVVG------------------SSGNDVVI--------------G 282
N AQ IE+VVG +GND G
Sbjct: 3449 GNSGDAQGDTYSGIENVVGSAHDDYVYGSASGSVADLGAGNDTFDNTEVSSVVKSDTVDG 3508
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ N+ + +G+D G +G D + A S + V D L
Sbjct: 3509 GAGNDTIWTGNGDDTLIGGAGDDQLYGEAGSDTFLFDFGSGHDTVNGGGGSWTDTL 3564
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 16/56 (28%), Gaps = 2/56 (3%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDANEHKQD 336
N+ SG D G G D Y A S + D +H D
Sbjct: 3248 GDGNDTLSGGSGTDTLFGGGGDDVLVYSADQVSDRNDADYQDQGGAARDGTDHTVD 3303
>gi|319637699|ref|ZP_07992465.1| hypothetical protein HMPREF0604_00088 [Neisseria mucosa C102]
gi|317400854|gb|EFV81509.1| hypothetical protein HMPREF0604_00088 [Neisseria mucosa C102]
Length = 912
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 3/127 (2%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ G++ V +++ + +G ++ G N I + E + + +
Sbjct: 54 NGGDDTVYSSVSYTLPNYVENLVLTG---TANIFGAGNNSNNILIGNEGRNRLNSGRGDD 110
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + G GND + G + N+ +GND+ +G G DT+ + A S I
Sbjct: 111 IVHGGGGNDFINGGEGNDRLFGETGNDTLNGEAGNDMLEGGEGDDTYLFSAKSEQDTIID 170
Query: 321 FENAIIV 327
+ +
Sbjct: 171 DQGHNSI 177
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 37/103 (35%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++ G N I E + + + TI +++ G GND + G N+
Sbjct: 337 TANIFAAGNNSNNILTGNEGRNRLNSGRGDDTIYGMGGNDNLNGGDGNDYLDGGDGNDAI 396
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+G+DV G +G D A + Y + I N
Sbjct: 397 NGDAGDDVLVGGNGKDILKGGAGNDTYIYGDNDTIIDNQGINT 439
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 65/215 (30%), Gaps = 35/215 (16%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSS 275
I+ +G + LT G LN+ I G N + + + G
Sbjct: 335 TGTANIFAAGNNSNNILTGNEGRNR---LNSGRGDDTIYGMGGNDNLNGGDGNDYLDGGD 391
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------------------------- 310
GND + G++ ++V +G D+ G +G DT+ Y
Sbjct: 392 GNDAINGDAGDDVLVGGNGKDILKGGAGNDTYIYGDNDTIIDNQGINTLKFSDGLNNAKL 451
Query: 311 ------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
N+ D ++R +F DQ + +Q
Sbjct: 452 NLKTIHNDDGSQSWEITSEQGSALIQNQIGADGSVSIDRFQFNDQTYTAAQFQQAFQALK 511
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + G ++GRDI +
Sbjct: 512 AETIKFVGTNGDDTLHGDAGNNEIDGGNDGRDILY 546
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 24/57 (42%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G +GND + + ++ +GND +G DT+ + I+ +
Sbjct: 570 DKLYGGNGNDKLYAHVGADLLDGGAGNDYLEGGEHNDTYVFGKGYGHDTIFDYNFGF 626
Score = 37.0 bits (84), Expect = 9.4, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 21/164 (12%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ F TI+ + LDL+ V Y G + TI I V +
Sbjct: 757 NNFNHTIHADSDNSDLDLSRYTSVVEY-----------RGNRSDETITLGRGINIVDTAG 805
Query: 276 GNDVVIGNSANNVFF---ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GND + A+N +SGND F+ G DT + K + + +
Sbjct: 806 GNDTITDPGADNTIIMFGRNSGNDTFNPYGGSDTQVLFKEGLTLKDLQLKTGDDWVLTIK 865
Query: 333 HKQDFLS-------DVERLRFADQCIDSVNVKQRSILEYTASYE 369
D L+ +++ F + + ++++
Sbjct: 866 DTGDTLTIHDIANNNIDSFVFESGKSYTADEISKALITENTQNN 909
>gi|330957671|gb|EGH57931.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 1610
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D + L + LNT + + GG + + T E++ GS D + GN
Sbjct: 1419 DGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLDTLKGT--ENLTGSQFADALTGNKN 1473
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
NV GND G +G D + + + + AN+ L D+
Sbjct: 1474 ANVLIGGEGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNSANDLGLGALRDI 1529
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N+ Y + + +D +I + + + ++ G E N
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVQGSEAN 390
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I E + G +G D + G + +++ +G D G +G DTF + + Y+
Sbjct: 391 DIITGSAANELIFGLAGKDTLNGGAGDDILVGGAGADKLSGGAGADTFRFDQLTDSYRTA 450
Query: 320 RFENAIIVYD 329
+V D
Sbjct: 451 TVSATDLVSD 460
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 232 DLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D T ++ I++ + ++ G + T+ ++++G G+D + G++ ++
Sbjct: 772 DATGASVADSFAINVGNVAPGTLTGSQNAETLYGTEGDDTLLGLGGDDTLRGDTGADILN 831
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D G + DTF Y + Y+ Y A + DF S +++ +
Sbjct: 832 GGAGRDTLYGGANADTFVYSTLTDSYRNYEAGG----LTATDTIADFTSGQDKIDVSALG 887
Query: 351 IDSVNVKQRSILE 363
+ + + L
Sbjct: 888 VLGLGNGENHTLY 900
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+ GND++ GN+ + +G D G + D A + L+ ++ Y
Sbjct: 541 DTLTGTEGNDLINGNAGVDRLNGGAGADTLTGGADADILTGGAGADLFIYTSRLDSYRNY 600
Query: 329 DA-----NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+A ++ DF + +R+ + + + + + Y + D
Sbjct: 601 NASGTKQSDTITDFNTAEDRIDLSSIGLRGLGDGSANTI-YLSVNAD 646
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 4/141 (2%)
Query: 246 NTESWSSIGGYEKNMT-IAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
N +S G N I E ++ G+S +D ++G + N++ G D G
Sbjct: 1200 NDLGFSGNSGDNNNPADIVSGGQNEGGNIFGTSDDDTLVGGTGNDILDGDQGADDMTGGD 1259
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSI 361
G D + + I + + ++VE L I++ +++
Sbjct: 1260 GNDIYVVDNALDTVTESNDSPSQIDTVVSSVSWELGANVENLMLTGFSAINATGNALKNV 1319
Query: 362 LEYTASYEDLIQVIGQDVFES 382
+ A+ L G D+
Sbjct: 1320 ITGNAANNILDGGAGADLLTG 1340
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 67/190 (35%), Gaps = 18/190 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTESWS- 251
G GN+I + D G+D+ +T + ID S S
Sbjct: 1239 GGTGNDILDGDQGADDMTG------GDGNDIYVVDNALDTVTESNDSPSQIDTVVSSVSW 1292
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+G +N+ + + I + G++ +V+ GN+ANN+ +G D+ G G D++
Sbjct: 1293 ELGANVENLMLTGFSAI-NATGNALKNVITGNAANNILDGGAGADLLTGGDGSDSYVVDD 1351
Query: 312 PSYL---YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I ++ +++E L + + Y +
Sbjct: 1352 VADRVVETATDAQTGGIDTVYSSLASYTLGANLENLVITSSAAANATGNALDNVLYAGAG 1411
Query: 369 EDLIQVIGQD 378
++++ +
Sbjct: 1412 DNVLDGRDGN 1421
>gi|327283195|ref|XP_003226327.1| PREDICTED: matrix metalloproteinase-17-like [Anolis carolinensis]
Length = 562
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 24/132 (18%)
Query: 23 WSNYFIRYKPDVLTTHR-LSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W+ + ++ L D + + +AL WS + L F E + + +DI+
Sbjct: 98 WNKRNLSWRVRTFPKESHLGHDTV------RALMYYALKVWSDITPLNFHEVAGNNADIQ 151
Query: 81 FISS----NNGY----------VCTPRYDSRYFMEINFDKADVWRY--GIGKGTILSHNA 124
S N+GY + + +FD + W + G L A
Sbjct: 152 IDFSKTDHNDGYPFDGPGGMVAHAFSPGEHHAAGDTHFDDDESWTFRSSDAHGMDLFAVA 211
Query: 125 LHEIGHALGLMH 136
+HE GHA+GL H
Sbjct: 212 VHEFGHAIGLTH 223
>gi|73808266|ref|NP_068573.2| matrix metalloproteinase-26 preproprotein [Homo sapiens]
gi|13629493|sp|Q9NRE1|MMP26_HUMAN RecName: Full=Matrix metalloproteinase-26; Short=MMP-26; AltName:
Full=Endometase; AltName: Full=Matrilysin-2; Flags:
Precursor
gi|9937495|gb|AAG02470.1| matrix metalloproteinase-26 [Homo sapiens]
gi|10185070|emb|CAC08821.1| matrilysin-2 [Homo sapiens]
gi|75516560|gb|AAI01544.1| Matrix metallopeptidase 26 [Homo sapiens]
gi|75517698|gb|AAI01542.1| Matrix metallopeptidase 26 [Homo sapiens]
gi|119589223|gb|EAW68817.1| matrix metallopeptidase 26 [Homo sapiens]
Length = 261
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 56/157 (35%), Gaps = 48/157 (30%)
Query: 58 ALGEWSKVVDLTFEETSIH-SDIKFIS-----SNNGYVCTPRY--------DSRYFMEIN 103
A+ WS V L F++ +DIK + P +S ++
Sbjct: 127 AVSIWSNVTPLIFQQVQNGDADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVH 186
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FDK + W G L A HEIGH+LGL H G+ +S+M
Sbjct: 187 FDKNEHWS-ASDTGYNLFLVATHEIGHSLGLQHSGN-------------------QSSIM 226
Query: 164 --SYFMPQDSMMDASFGYCATPMV--SDIVAVQKIYG 196
+Y+ + T + DI +Q +YG
Sbjct: 227 YPTYW----------YHDPRTFQLSADDIQRIQHLYG 253
>gi|284050049|ref|ZP_06380259.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
gi|291565710|dbj|BAI87982.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 664
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/278 (15%), Positives = 93/278 (33%), Gaps = 25/278 (8%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF-GYCATPMVSD----------IVA 190
++G D + S+M +++ + TP+ I A
Sbjct: 345 ASDSLFGGDGNDSLLGRRFSIMDGGDGNNTLNGGEWLRTGTTPLEVSLFGGAGNDLIIGA 404
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLI-----GGVKNYI 243
I G G++ S T+ G+D + + G V I
Sbjct: 405 QGSITNVIAGGAGDDTIVFGTTNDILLSDTANTL----GNDSITAANVEFFNEGNVGVSI 460
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
N + +++ G E+N + + + ++G +G+D ++G + N+ F SGND+ DG G
Sbjct: 461 T-NLQGNNTVEGSERNDLLVTGSGNDLLLGGNGDDTLLGGAGNDFLFGGSGNDLLDGGPG 519
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + E + + + + +Q + V R
Sbjct: 520 DDTL--EGGFGVNTLVGGEGDNQFFYRFSEAVKTTTSADFITDFNQGGNDRLVFVRDASV 577
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ + + ++ + + GL D ++
Sbjct: 578 GGFGFALVPGISNSELGPNQFIYLPTGLYRDADANINT 615
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 56/185 (30%), Gaps = 35/185 (18%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G + Y + P TI GG+D + + +GG Y D S + G
Sbjct: 6 GPTFLTSGPDQYNQDAPFAPRP--DTILGLGGNDTITTSTLGGSLVYGDSLVG--SDLSG 61
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + Q D + G N+ + G G DT P+ L
Sbjct: 62 NDVLVARGQG------------DTLFGGPGNDSLLGRAPGVALVGGDGRDTIVAEQPATL 109
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
Y +D L V + + N + +IL + +
Sbjct: 110 Y--------------GGAGRDLLVAV-----SGGNLMFGNQDEDTILGGLQGNDTIYGGK 150
Query: 376 GQDVF 380
G D+
Sbjct: 151 GDDLI 155
Score = 45.1 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 15/202 (7%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLL-----DL 233
P I+ + +LG + +Y + D + G D L +
Sbjct: 22 PFAPRPDTILGLGGNDTITTSTLGGSLVYGDSLVGSDLSGNDVLVARGQGDTLFGGPGND 81
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES- 292
+L+G + L E+ T+ + +V SG +++ GN +
Sbjct: 82 SLLGRAPG-VALVGGDGRDTIVAEQPATLYGGAGRDLLVAVSGGNLMFGNQDEDTILGGL 140
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKI-------YRFENAIIVYDANEHKQDFLSDVERLR 345
GND G G D +Y+ S + N + D + +
Sbjct: 141 QGNDTIYGGKGDDLIGFYSASGQSNVGLVVPPAVGGANQGNNWVNGNIGNDTIVGINTGD 200
Query: 346 FADQCIDSVNVKQRSILEYTAS 367
D+ ++ L Y +
Sbjct: 201 SLYGGQDNDSIVGVGSLSYLSG 222
Score = 44.3 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 35/165 (21%)
Query: 225 SGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMT-IAQHTVIESVVGSSGN 277
G+D + D L G +++ NT + + G +++ A +V++ G GN
Sbjct: 281 GAGNDTIMSFAAEDTLLGGEGDDFLSTNTSAQLTTQGINSSLSGFAGGSVLD---GGPGN 337
Query: 278 DVVIGNSANNVFFESSGND--------VFDGSSGLDTFFYY---------------APSY 314
D ++ A++ F GND + DG G +T +
Sbjct: 338 DTLVSVFASDSLFGGDGNDSLLGRRFSIMDGGDGNNTLNGGEWLRTGTTPLEVSLFGGAG 397
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVK 357
I + +I A D + + +D N
Sbjct: 398 NDLIIGAQGSITNVIAGGAGDDTIVFGTTNDILLSDTANTLGNDS 442
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 58/195 (29%), Gaps = 36/195 (18%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G+++Y + Y SG G+D L I T S S
Sbjct: 197 NTGDSLYGGQDNDSIVGVGSLSYLSGDEGNDTL----------RIQNPTGSISPFDPQTA 246
Query: 259 NMTIAQHTVIESVVGSSGNDVVIG-----NSANNVFFESSGNDV---------FDGSSGL 304
+ + Q T++ G +G+D +IG N +GND G G
Sbjct: 247 LVGVTQVTMM----GGAGDDSIIGPIGRFGEGQNFLDGGAGNDTIMSFAAEDTLLGGEGD 302
Query: 305 DTFFYYAPSYLY------KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
D + L + F ++ + F DS+ ++
Sbjct: 303 DFLSTNTSAQLTTQGINSSLSGFAGGSVLDGGPGNDTLVSVFASDSLFGGDGNDSLLGRR 362
Query: 359 RSILEYTASYEDLIQ 373
SI++ L
Sbjct: 363 FSIMDGGDGNNTLNG 377
Score = 40.9 bits (94), Expect = 0.81, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 2/109 (1%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TIY GDDL+ G N + + G + N + + +++VG +
Sbjct: 142 GNDTIYGGKGDDLIGFYSASGQSNVGLVVPPAV--GGANQGNNWVNGNIGNDTIVGINTG 199
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
D + G N+ G G DT P+ + + A++
Sbjct: 200 DSLYGGQDNDSIVGVGSLSYLSGDEGNDTLRIQNPTGSISPFDPQTALV 248
>gi|296216049|ref|XP_002754397.1| PREDICTED: stromelysin-1 [Callithrix jacchus]
Length = 477
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 57/192 (29%), Gaps = 50/192 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTLDLPK-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADVMI 161
Query: 73 ---TSIHSDIKFISSNNGYVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHE 127
H D + G V Y + + +FD + W GT L A HE
Sbjct: 162 SFAVREHGDF-YPFDGPGRVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHE 219
Query: 128 IGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+GH LGL H + YPVY + + D + + +
Sbjct: 220 LGHTLGLFHSDNTEALMYPVY----------------------NPLTDLTRFHLSQ---D 254
Query: 187 DIVAVQKIYGAP 198
D+ +Q +YG
Sbjct: 255 DVNGIQSLYGPH 266
>gi|195957725|gb|ACG59772.1| myroilysin precursor [Myroides profundi]
Length = 273
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 10/184 (5%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRY 94
++ + P + + EWS ++TF S I+ + +
Sbjct: 79 NGSVITVGLYGGTPYVRSKVKQYAQEWSNYANITFNFVESGTPQIRVTFTQGAGSYSYLG 138
Query: 95 DSRYFMEINFDKADV-WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ N + + W S +HE GHALG++H + + + Y
Sbjct: 139 TQALSIPSNEETMNFGWFDDSTSDAEFSRTVIHEFGHALGMIHEHQHPLTNIPWDKNKVY 198
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--YGAPKGSLGNNIYKIEV 211
+ +Y+ +D + Y T Q I Y N V
Sbjct: 199 A---YYAGYPNYWSKKDVDNNLFATYSTTQTQYSAYDTQSIMHYSISSALTTN---GFSV 252
Query: 212 QQKD 215
Sbjct: 253 GNNS 256
>gi|149492485|ref|XP_001510529.1| PREDICTED: similar to hCG2044662, partial [Ornithorhynchus
anatinus]
Length = 312
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 21/126 (16%)
Query: 32 PDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEETSI-HSDIKFISSNN 86
P L + + R +AL WS + L F E + H+DI+ S
Sbjct: 36 PSALPASTRVRTFPRESQLGHDTVRALMYYALKVWSDITPLNFHEVAGSHADIQIDFSKA 95
Query: 87 GYVCTPRYDSRYF--------------MEINFDKADVWRY--GIGKGTILSHNALHEIGH 130
+ +D + +FD + W + +G L A+HE GH
Sbjct: 96 DHSDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDESWTFRSSDAQGMDLFAVAVHEFGH 155
Query: 131 ALGLMH 136
A+GL H
Sbjct: 156 AIGLTH 161
>gi|73959405|ref|XP_547166.2| PREDICTED: similar to matrix metalloproteinase 25 preproprotein
[Canis familiaris]
Length = 761
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 60/191 (31%), Gaps = 41/191 (21%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD----LTF 70
+ L W + ++ + L + + AL W + + F
Sbjct: 107 YALSGSMWRKRTLTWRVRSFPQS------SALTQETVRTLMHHALTTWGAPTEPDILIDF 160
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFM---EINFDKADVWRYGI--GKGTILSHNAL 125
+ H D + G + + +FD + W YG G+GT L A+
Sbjct: 161 AR-AYHQD-SYPFDGQGGTLAHAFFPGEHPISGDTHFDDEETWTYGSKDGEGTDLFAVAV 218
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GHALGL H + N S+M F +
Sbjct: 219 HEFGHALGLGHSSAPN-------------------SIMRPFYQGPVGDPHEYRLS----D 255
Query: 186 SDIVAVQKIYG 196
D +Q++YG
Sbjct: 256 DDREGLQQLYG 266
>gi|85702912|ref|ZP_01034016.1| alkaline phosphatase [Roseovarius sp. 217]
gi|85671840|gb|EAQ26697.1| alkaline phosphatase [Roseovarius sp. 217]
Length = 1423
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 10/154 (6%)
Query: 199 KGSLGNNIYK--IEVQQKDSPFIQTIYDSG-GDDLL------DLTLIGGVKNYIDLNTES 249
G LGN+ Q + + + G G+DL+ D G + I+ T
Sbjct: 1219 NGGLGNDTIGGGFGDDQINGGAGNDVANGGFGNDLVQGEGDNDRLGGGQGADTIEGGTGD 1278
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++GG + +S+ G G+D V+G + ++ +DV DG +G DT
Sbjct: 1279 D-NLGGGAGTDLLDGGEGNDSLGGGFGDDTVLGGAGDDFLAGGGRDDVLDGGAGNDTLNG 1337
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ L + + + D ++D +
Sbjct: 1338 GDGNDLMTGGEGVDVFVFNTLISGEADIITDFDS 1371
Score = 44.3 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 15/125 (12%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V G N+ G+D +G +G D F N ++ + + +
Sbjct: 1217 TVNGGLGNDTIGGGFGDDQINGGAGNDVANGG----------FGNDLVQGEGDNDRLGGG 1266
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
+ + + +L+ + L G D + + F G GRD
Sbjct: 1267 QGADTIEGGTGDDNLGGGAGTDLLDGGEGNDSLGGGFGDDTVLGGAGDDFLAGG---GRD 1323
Query: 397 ITFDS 401
D
Sbjct: 1324 DVLDG 1328
>gi|156717858|ref|NP_001096469.1| matrix metallopeptidase 17 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
gi|134024244|gb|AAI36207.1| LOC100125088 protein [Xenopus (Silurana) tropicalis]
Length = 588
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH-SDIKFISS----NNGYVCTPRYDSRYF------- 99
+ + +AL WS + L F E + + +DI+ S N+GY +
Sbjct: 146 RALMYYALKVWSDITPLNFHEVAGNNADIQIDFSRADHNDGYPFDGPGGTVAHAFFPGEH 205
Query: 100 ---MEINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGS 139
+ +FD + W + G L A+HE GHA+GL H
Sbjct: 206 LTSGDTHFDDEESWTFRSSDIHGMDLFAVAVHEFGHAIGLTHISD 250
>gi|8843950|gb|AAF80180.1| matrix metalloproteinase MMP-26 [Homo sapiens]
Length = 261
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 56/157 (35%), Gaps = 48/157 (30%)
Query: 58 ALGEWSKVVDLTFEETSIH-SDIKFIS-----SNNGYVCTPRY--------DSRYFMEIN 103
A+ WS V L F++ +DIK + P +S ++
Sbjct: 127 AVSIWSNVTPLIFQQVQNGDADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVH 186
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FDK + W G L A HEIGH+LGL H G+ +S+M
Sbjct: 187 FDKNEHWS-ASDTGYNLFLVATHEIGHSLGLQHSGN-------------------QSSIM 226
Query: 164 --SYFMPQDSMMDASFGYCATPMV--SDIVAVQKIYG 196
+Y+ + T + DI +Q +YG
Sbjct: 227 YPTYW----------YHDPRTFQLSADDIQRIQHLYG 253
>gi|254229412|ref|ZP_04922828.1| Autotransporter adhesin [Vibrio sp. Ex25]
gi|151938103|gb|EDN56945.1| Autotransporter adhesin [Vibrio sp. Ex25]
Length = 2748
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +++ QQ D F+ + D G ++ + + D+ + G
Sbjct: 2520 GSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLTLNDSGTDIAQTERHASVG 2579
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +I I+ ++G +G D + G + +++ GND+ G G D
Sbjct: 2580 DEFANSITGGESIDILLGQAGEDTLSGGAGDDILVGGLGNDILTGGLGSDILTGGEGIDT 2639
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++ + + + +DF D ++L +D
Sbjct: 2640 FTFTQE--SLDMTSSRDVIKDFRLDEDKLDLSD 2670
>gi|291568485|dbj|BAI90757.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1059
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 4/128 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I E+++G GND + NN F GND G SG D
Sbjct: 859 WFGSDGDDLIMGSDYDETLLGFKGNDFLDARQGNNTLFGGQGNDTLVGGSGRDALLG--N 916
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI--LEYTASYED 370
++ + +Y + L F D+ D + I L +
Sbjct: 917 KDDDILFGGNSGDTLYGGQGDDTLVAGEGNSLLFGDKGNDILYGGSEGIDTLNGGEGNDT 976
Query: 371 LIQVIGQD 378
+ + G+
Sbjct: 977 FVMLPGEG 984
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 68/181 (37%), Gaps = 23/181 (12%)
Query: 212 QQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQH 265
PF + S GDDL+ D TL+G N ++D + +++ G + N T+
Sbjct: 849 NSITQPFPNQWFGSDGDDLIMGSDYDETLLGFKGNDFLDARQGN-NTLFGGQGNDTLVGG 907
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++++G+ +D++ G ++ + + G+D G F +
Sbjct: 908 SGRDALLGNKDDDILFGGNSGDTLYGGQGDDTLVAGEGNSLLFGDKGND----------- 956
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L+ E + + + +++ +D++ ++G M
Sbjct: 957 -ILYGGSEGIDTLNGGE----GNDTFVMLPGEGYTVVADWEMNQDVMVLLGDATNYRMGD 1011
Query: 386 F 386
Sbjct: 1012 L 1012
>gi|262396873|ref|YP_003288726.1| rTX toxin putative [Vibrio sp. Ex25]
gi|262340467|gb|ACY54261.1| rTX toxin putative [Vibrio sp. Ex25]
Length = 2743
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +++ QQ D F+ + D G ++ + + D+ + G
Sbjct: 2515 GSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLTLNDSGTDIAQTERHASVG 2574
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +I I+ ++G +G D + G + +++ GND+ G G D
Sbjct: 2575 DEFANSITGGESIDILLGQAGEDTLSGGAGDDILVGGLGNDILTGGLGSDILTGGEGIDT 2634
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++ + + + +DF D ++L +D
Sbjct: 2635 FTFTQE--SLDMTSSRDVIKDFRLDEDKLDLSD 2665
>gi|260896121|ref|ZP_05904617.1| flagellin hook IN domain protein [Vibrio parahaemolyticus Peru-466]
gi|308088089|gb|EFO37784.1| flagellin hook IN domain protein [Vibrio parahaemolyticus Peru-466]
Length = 2539
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +++ QQ D F+ + D G ++ + + D+ + G
Sbjct: 2311 GSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLTLNDSGTDIAQTERHASVG 2370
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +I I+ ++G +G D + G + +++ GND+ G G D
Sbjct: 2371 DEFANSITGGESIDILLGQAGEDTLSGGAGDDILVGGLGNDILTGGLGSDILTGGEGIDT 2430
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++ + + + +DF D ++L +D
Sbjct: 2431 FTFTQE--SLDMTSSRDVIKDFRLDEDKLDLSD 2461
>gi|260878364|ref|ZP_05890719.1| flagellin hook IN domain protein [Vibrio parahaemolyticus AN-5034]
gi|308090276|gb|EFO39971.1| flagellin hook IN domain protein [Vibrio parahaemolyticus AN-5034]
Length = 2437
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +++ QQ D F+ + D G ++ + + D+ + G
Sbjct: 2209 GSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLTLNDSGTDIAQTERHASVG 2268
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +I I+ ++G +G D + G + +++ GND+ G G D
Sbjct: 2269 DEFANSITGGESIDILLGQAGEDTLSGGAGDDILVGGLGNDILTGGLGSDILTGGEGIDT 2328
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++ + + + +DF D ++L +D
Sbjct: 2329 FTFTQE--SLDMTSSRDVIKDFRLDEDKLDLSD 2359
>gi|254488611|ref|ZP_05101816.1| hypothetical protein RGAI101_3274 [Roseobacter sp. GAI101]
gi|214045480|gb|EEB86118.1| hypothetical protein RGAI101_3274 [Roseobacter sp. GAI101]
Length = 752
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 61/180 (33%), Gaps = 6/180 (3%)
Query: 225 SGGDDLLDLT-----LIGGVKNYIDLNT-ESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ G + + + ++ + +D + + I N I +S+ G GND
Sbjct: 242 TDGANTITFSEIEHLVLTDQADTVDGSADTAGMYIEARGGNDDILGGFGNDSLRGEDGND 301
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + ++ +G+D+ G DT + + S + I + ++ +Y ++E
Sbjct: 302 TLSGQAGDDSVAGGAGDDLIYTGYGADTVWGDSGSDRFVIDDGDGSVTIYGSDEGGDTDT 361
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
D + + + + + ++ + G D++
Sbjct: 362 LDFNTGAATNGVTVTFGGWEFGAFNFDGTTGTFYEIEAVQGTDLADSLDASADMSGLDLS 421
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 35/170 (20%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-----IGGYEK 258
+ ++ + I D G + + GG + +D NT + ++ GG+E
Sbjct: 328 DTVWGDSGSDR-----FVIDDGDGSVTIYGSDEGGDTDTLDFNTGAATNGVTVTFGGWEF 382
Query: 259 NMTIAQHTV-----IESVVGS--------------------SGNDVVIGNSANNVFFESS 293
T IE+V G+ +G+D ++G ++ +
Sbjct: 383 GAFNFDGTTGTFYEIEAVQGTDLADSLDASADMSGLDLSGAAGDDTILGGMGDDFIDGGT 442
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G+D G G DT + + + + D N L+D +
Sbjct: 443 GDDSLKGGLGNDTITGDDGTDTFSYAAGDGTDTITDFNTGNTGTLNDGDS 492
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGS 301
D + GN N+ +GND G
Sbjct: 20 DSIQGNGGNDTISGGAGNDTIYGG 43
>gi|34495766|ref|NP_899981.1| RTX repeat-containing structural toxin [Chromobacterium violaceum
ATCC 12472]
gi|34101622|gb|AAQ57990.1| probable RTX (repeat in structural toxin) [Chromobacterium violaceum
ATCC 12472]
Length = 4130
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 31/172 (18%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG +L + + + + GG+D + L I + + + +
Sbjct: 2871 YGKNAITLDDGNNSFADLRGKTDTGFAVRGMGGNDAIYLDTSKADNVLIG-DDGNLNQLS 2929
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + ND + N++ G+D G G+DT Y
Sbjct: 2930 GKPNEV----------------NDTLYAGKGNDILIGGKGDDSLYGGDGVDTAVYAGNFK 2973
Query: 315 LYKIYR---FENAIIVYDANE-----------HKQDFLSDVERLRFADQCID 352
Y I R + ++ + D L D+ERL+F D
Sbjct: 2974 DYTITRPVIGAGGSVFFEVTDKQVTAANPYAGEGHDSLYDIERLQFKDGTYY 3025
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 35/107 (32%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ T G K + T++++ + I+ ++ G++ +N
Sbjct: 3938 YNYTFTGDSKLLGNGQTDTFTYTVRDADGDLSSARLHIDLSTLDPNQRLLQGDAGDNRLT 3997
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ N++ G +G D +K + A + DF
Sbjct: 3998 GTDANELIRGGAGNDILTGGLGVDTFKWTLGDQGTAAKPARDVITDF 4044
>gi|330448513|ref|ZP_08312161.1| hemolysin-type calcium-binding repeat family protein
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492704|dbj|GAA06658.1| hemolysin-type calcium-binding repeat family protein
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 899
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N T+ + + + G GND + G +++ GND+ G G D A S
Sbjct: 725 GQHGGNDTLNGNGGNDILFGDGGNDTLNGGDGHDLLLGGYGNDILSGGDGDDILTGGAGS 784
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
L+ + D H DF ++L +D
Sbjct: 785 DLFLFDSISKDQVSTD---HITDFNVKEDKLNISD 816
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 37/92 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +++ G G+D+++G N++ G+D+ G +G D F + +
Sbjct: 732 TLNGNGGNDILFGDGGNDTLNGGDGHDLLLGGYGNDILSGGDGDDILTGGAGSDLFLFDS 791
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
S V + + D L +
Sbjct: 792 ISKDQVSTDHITDFNVKEDKLNISDLLDKNDH 823
Score = 38.2 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 3/82 (3%)
Query: 278 DVVIGN--SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D +G N+ + GND+ G G D + + + N I+ +
Sbjct: 720 DKFLGGQHGGNDTLNGNGGNDILFGDGGND-TLNGGDGHDLLLGGYGNDILSGGDGDDIL 778
Query: 336 DFLSDVERLRFADQCIDSVNVK 357
+ + F D V+
Sbjct: 779 TGGAGSDLFLFDSISKDQVSTD 800
>gi|197104477|ref|YP_002129854.1| hypothetical protein PHZ_c1011 [Phenylobacterium zucineum HLK1]
gi|196477897|gb|ACG77425.1| hypothetical protein PHZ_c1011 [Phenylobacterium zucineum HLK1]
Length = 802
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 2/150 (1%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
DL D LIG + I + + + G + I + + G+ GND V G ++
Sbjct: 605 DLGDTRLIGTDADEIIRDPGGRNFLRGGGGDDRIYGGSGFDDAHGNLGNDTVSGGEGDDW 664
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
GND+ +G G D + ++ + V + + D
Sbjct: 665 VVGGQGNDLLNGEGGHDVVYGNLGDD--TLHGGLGSDWVRGGQGDDLIYAGGGDDWISGD 722
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D++ + L +T L +V+
Sbjct: 723 MGSDTITGGAGADLFHTHGNAGLDRVLDFS 752
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 12/127 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ IY + G+D + D ++GG N + + G
Sbjct: 635 DDRIYGGSGFDDAHGNL-------GNDTVSGGEGDDWVVGGQGNDLLNGEGGHDVVYGNL 687
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ T+ + V G G+D++ ++ G+D G +G D F + + L +
Sbjct: 688 GDDTLHGGLGSDWVRGGQGDDLIYAGGGDDWISGDMGSDTITGGAGADLFHTHGNAGLDR 747
Query: 318 IYRFENA 324
+ F A
Sbjct: 748 VLDFSFA 754
>gi|28900806|ref|NP_800461.1| hypothetical protein VPA0951 [Vibrio parahaemolyticus RIMD 2210633]
gi|28809252|dbj|BAC62294.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 487
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +++ QQ D F+ + D G ++ + + D+ + G
Sbjct: 259 GSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLTLNDSGTDIAQTERHASVG 318
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +I I+ ++G +G D + G + +++ GND+ G G D
Sbjct: 319 DEFANSITGGESIDILLGQAGEDTLSGGAGDDILVGGLGNDILTGGLGSDILTGGEGIDT 378
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++ + + + +DF D ++L +D
Sbjct: 379 FTFTQE--SLDMTSSRDVIKDFRLDEDKLDLSD 409
>gi|262394175|ref|YP_003286029.1| putative RTX toxin [Vibrio sp. Ex25]
gi|262337769|gb|ACY51564.1| putative RTX toxin [Vibrio sp. Ex25]
Length = 4848
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
Q +++ G +GND++ G N++ G+D+ G G D S ++K N
Sbjct: 4691 QGDKSDNLSGGAGNDLLFGQGGNDILVGGEGDDILIGGLGNDILTGDEGSDIFKWSEVTN 4750
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + DF D + L F+D D + +L S +
Sbjct: 4751 EV------DTVTDFNKDEDTLDFSDLFDDLSKDEVGELLNDLQSGD 4790
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 232 DLTLIGGVK--NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D++ I G Y+ N E ++ +K+ ++ + + G GND+++G +++
Sbjct: 4666 DVSTIDGEDIHEYVKNNLEEFNQSHQGDKSDNLSGGAGNDLLFGQGGNDILVGGEGDDIL 4725
Query: 290 FESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND+ G G D F + + + + F D ++ D D
Sbjct: 4726 IGGLGNDILTGDEGSDIFKWSEVTNEVDTVTDFNKDEDTLDFSDLFDDLSKD 4777
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 25/117 (21%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGS--------SGLDTFFYYAPSYLYKIY---- 319
VG+ ND G ++VF ND F G G DT + YK+
Sbjct: 4097 VGTDYNDTFYGGGGDDVFIGGGNNDSFYGDDASTITDYDGQDTVYLTGNFSDYKMTFKDD 4156
Query: 320 -------------RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
R +++ + ++ + D L ++ER+ FAD+ ++ +L+
Sbjct: 4157 HGGQVPYWILLDNRSIDSVNDHTGSDDRGDHLYEIERIVFADKVVELKPDGTYEVLQ 4213
>gi|291302041|ref|YP_003513319.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290571261|gb|ADD44226.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 639
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 60/180 (33%), Gaps = 28/180 (15%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ I+ + I+ GG+D +D N+ + + G + +
Sbjct: 244 DDTIHGSDKANVLNGGDGADVIHGGGGNDRIDAGG----------NSSGYDVVYGNDGDD 293
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSA---------NNVFFESSGNDVFDGSSGLDTFFYYA 311
TI + + V G +GND + G ++ + +DV G G D
Sbjct: 294 TITGGSGNDRVAGGAGNDTIDGGQGKDYLDGQRDDDTITGGTEDDVIYGLEGEDVLRGED 353
Query: 312 PSYLYKIYRFENAIIVYDANE-----HKQDFLSDVE--RLRFADQCIDSVNVKQRSILEY 364
+ + R + I N+ H +D LS + + + D+V+ Y
Sbjct: 354 GNDYLEGGRDNDRIDGGIGNDTISGGHGEDTLSGGDGRDVLYGGHGKDTVDGGSGLDQAY 413
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 58/204 (28%), Gaps = 13/204 (6%)
Query: 195 YGAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLN 246
Y G+ G++ TI G D LD T+ GG ++ +
Sbjct: 283 YDVVYGNDGDDTITGGSGNDRVAGGAGNDTIDGGQGKDYLDGQRDDDTITGGTEDDVIYG 342
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E + G + N + + + G GND + G + G DV G G DT
Sbjct: 343 LEGEDVLRGEDGNDYLEGGRDNDRIDGGIGNDTISGGHGEDTLSGGDGRDVLYGGHGKDT 402
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + + D + +D
Sbjct: 403 VDGGSGLDQAYVQEEDAIT----KDRYGIDTAER-NNVTISDNAGVYQVEGSDDFKARVQ 457
Query: 367 SYEDLIQVIGQDVFESMKHFYEFG 390
+ D++ K EFG
Sbjct: 458 ADLDMMAASPTAQQMLDKQAAEFG 481
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 33/129 (25%), Gaps = 4/129 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G +D + G+ NV G DV G G D S Y + +
Sbjct: 238 VFGGKDDDTIHGSDKANVLNGGDGADVIHGGGGNDRIDAGGNSSGYDVVYGNDGDDTITG 297
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-YTASYEDLIQVIGQD---VFESMKHF 386
QR + +D+I + + E +
Sbjct: 298 GSGNDRVAGGAGNDTIDGGQGKDYLDGQRDDDTITGGTEDDVIYGLEGEDVLRGEDGNDY 357
Query: 387 YEFGLSEGR 395
E G R
Sbjct: 358 LEGGRDNDR 366
>gi|89268105|emb|CAJ83580.1| matrix metalloproteinase 15 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
Length = 584
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 64/203 (31%), Gaps = 55/203 (27%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS---- 74
+ W+ + Y + + + R A WSK LTF E
Sbjct: 61 TGRKWNQQHLTYSIQNYSDKLGMHNS-------IDAIRKAFDVWSKATSLTFREVPYEAV 113
Query: 75 ----IHSDIKFISSNNGYVCTPRYDS-------RYFM------EINFDKADVWR--YGIG 115
+DI + ++ + + +D YF + +FD + W
Sbjct: 114 RQRHSSADILILFASGFHGDSSPFDGPGGFLAHAYFPGPGMGGDAHFDSEEPWTVENMDL 173
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
G L A+HE+GH+LGL H + + +M+ F D
Sbjct: 174 AGNHLFLVAVHELGHSLGLEHSNNPSA-------------------IMAPFYQWMDTEDF 214
Query: 176 SFGYCATPMVSDIVAVQKIYGAP 198
D +Q++YG P
Sbjct: 215 Q------LPEDDRRGIQQLYGPP 231
>gi|303289933|ref|XP_003064254.1| hypothetical protein MICPUCDRAFT_49135 [Micromonas pusilla CCMP1545]
gi|226454570|gb|EEH51876.1| hypothetical protein MICPUCDRAFT_49135 [Micromonas pusilla CCMP1545]
Length = 3814
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD- 542
++ Y+ Y DLR FG + GAA RH+ HG KEGR+ + + +S +
Sbjct: 3013 EAKCYVNRYPDLRRAFGHNIGAAKRHWNKHGKKEGRDKECDSHKKVKSSKAKFKCWGGNE 3072
Query: 543 --APDLVQAGKDHFSNFGYEEG 562
++ + + N+G G
Sbjct: 3073 VCRMNVWRDWSKNNKNYGDRPG 3094
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ Y+ Y DLR FG + GAA RH+ HG KEGR+
Sbjct: 3014 AKCYVNRYPDLRRAFGHNIGAAKRHWNKHGKKEGRD 3049
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
Y+ Y DL FG + AA +H+ HG KEGR
Sbjct: 3014 AKCYVNRYPDLRRAFGHNIGAAKRHWNKHGKKEGR 3048
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+D + Y Y DL + G ++ + +H+ + G EGRD
Sbjct: 3003 TLDCDYITTEEAKCYVNRYPDLRRAFGHNIGAAKRHWNKHGKKEGRD 3049
>gi|21730383|pdb|1JIZ|A Chain A, Crystal Structure Analysis Of Human Macrophage Elastase
Mmp- 12
gi|21730384|pdb|1JIZ|B Chain B, Crystal Structure Analysis Of Human Macrophage Elastase
Mmp- 12
Length = 166
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 58/189 (30%), Gaps = 49/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 11 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 63
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 64 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 122
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 123 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 156
Query: 188 IVAVQKIYG 196
I +Q +YG
Sbjct: 157 IRGIQSLYG 165
>gi|302875211|ref|YP_003843844.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578068|gb|ADL52080.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 559
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 23/191 (12%)
Query: 221 TIYDSGGDDLLDLTLI--GGVKNYIDLNTESWSSIGGYEKNMT---------IAQHTVIE 269
T++D + + +L+ G LN E + GYE + T I T +
Sbjct: 298 TVWD---INTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGND 354
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V G+ GND++ G ++ + +G+D+ DG G D + + L +
Sbjct: 355 QVYGNGGNDLLYGEDGDDKLYGGNGDDILDGGEGKDYLYGENGNDLLDGKNGGGYLEGGA 414
Query: 330 ANE-------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N+ QD + + L D S+N S + S DLI + +
Sbjct: 415 GNDTYIFSKGDGQDIIYNSSSLD-TDNDKLSLNDVNLSETAFIKSNTDLIIKLNETTDSV 473
Query: 383 MKH-FYEFGLS 392
++ +G
Sbjct: 474 TILGYFNYGKY 484
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ ND + GN+ N++ GND+ G G DT+ + + I ++ AI D
Sbjct: 6 LIGTENNDQLTGNTGNDILDGGLGNDLLIGGRGNDTYIFNRGYGVITIEDYDEAIGAIDT 65
Query: 331 NEHKQDFLSDVERLRF 346
+ ++E + F
Sbjct: 66 IKFGVGI--NIENITF 79
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I +KN TI ++V G+ GND + G ++ + +G+D+ DG G D +
Sbjct: 139 TIRASDKNETIIALGSNDAVYGNGGNDFLYGQGGDDKLYGGNGDDILDGGEGKDYLYGEN 198
Query: 312 PSYLYK 317
+ L
Sbjct: 199 GNDLLD 204
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G TI E+++ ND V GN N+ + G+D G +G D
Sbjct: 131 MYGTPNADTIRASDKNETIIALGSNDAVYGNGGNDFLYGQGGDDKLYGGNGDDILDGGEG 190
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
Y N ++ + + V+ F
Sbjct: 191 KD-YLYGENGNDLLDGKNGGGYLEGGAGVDTYIF 223
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 4/101 (3%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I + I + ++ + TV + + G ++ G ++ +GND G
Sbjct: 291 KIQFADGTVWDINTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGG 350
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+G D + + L ++ + + D L E
Sbjct: 351 TGNDQVYGNGGNDLLYGEDGDDKLY----GGNGDDILDGGE 387
>gi|163739550|ref|ZP_02146960.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
gi|161387303|gb|EDQ11662.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
Length = 969
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 5/141 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ Q + Y GDD LD + N +S+ G +
Sbjct: 195 TGDGDGTVTFGGQTAYFWEFERFYLHSGDDTLDGSAATSAINVQ--TGGGDNSVTGGMGD 252
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI+ ++V G +G D + S ++V SSG D G +G D A S
Sbjct: 253 DTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSG-DTLLGGAGNDQITINAASGGS--V 309
Query: 320 RFENAIIVYDANEHKQDFLSD 340
A +V D D+ S+
Sbjct: 310 APSGATVVTDGGSASGDYDSN 330
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 26/167 (15%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A ++G++ + I++I + D +D + G Y++
Sbjct: 513 AGTVTVGSDTAQFSE-------IESITGTEKSDYIDGSAQSGNLAYVN----------SG 555
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG---------SSGLDTF 307
+ TI + + + G +GND + G + + +G+D DG +G DT
Sbjct: 556 GGDDTILGGSGNDDLQGGAGNDRLEGRAGTDDLRGGTGDDYLDGGTGGDYIDAGTGSDTV 615
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
++ + V + D + + + D
Sbjct: 616 IGGTGDDTIQLTADADRDEVILEDGSGSDLIYNFDLGDSGDGTTVDQ 662
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D T I N S+ G N TI+ + G G+D + G+S +++
Sbjct: 73 DTWYTTSGSASATTIPAN-----SMSGTSGNDTISGDANDNVIYGGDGDDYLTGSSGDDI 127
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
F G+D +D +G DTF+ IY + +Y +
Sbjct: 128 IFGGEGSDNYDTDTGNDTFYGEGGDDWVAIYDNMDGESLYGGETGET 174
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 43/146 (29%), Gaps = 19/146 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQ---TIYDSGG------------DDLLDLTLIG-GV 239
G P + +++Y + + +D G + L + + V
Sbjct: 348 GTPGTTGSDDVYDSITVLNTTDGAFLGVSQFDVGIDKVYLSEEPVSFTNTLASSGVSDFV 407
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
Y + NT+S+ ++ SV+ + + G ++ G D D
Sbjct: 408 VTYANGNTQSFRFYNDGGAAISDPAQFFGTSVISGA---TLSGGEGDDTLTGGYGADSID 464
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAI 325
G G D I E +
Sbjct: 465 GGDGQDQIILQDGFGNDTITGGEGGV 490
Score = 37.4 bits (85), Expect = 7.5, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 72/294 (24%), Gaps = 45/294 (15%)
Query: 77 SDIKFISSN------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
D S + + + + + + + D Y T H
Sbjct: 10 GDGTLDSGDGISANQSAFTSSDVIGTGSWTWSGQYQGDGQTYSNVTDTGTYHYG------ 63
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS----------MMDASFGYC 180
Y Y + + MS D+ Y
Sbjct: 64 ----SDGNVYFVPDTWYTTSGSASATTIPANSMSGTSGNDTISGDANDNVIYGGDGDDYL 119
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQQKDSPFIQTIYDS----------GGDD 229
DI I+G + + IYD+ G+
Sbjct: 120 TGSSGDDI-----IFGGEGSDNYDTDTGNDTFYGEGGDDWVAIYDNMDGESLYGGETGET 174
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEK-NMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
L D+ + G +D+N G A E SG+D + G++A +
Sbjct: 175 LGDMLEVYGDYAGVDVNVTFTGDGDGTVTFGGQTAYFWEFERFYLHSGDDTLDGSAATSA 234
Query: 289 FFE--SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G++ G G DT A + ++I ++ D
Sbjct: 235 INVQTGGGDNSVTGGMGDDTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSGD 288
>gi|9022385|gb|AAF82359.1|AF248646_1 matrix metalloproteinase-26 precursor [Homo sapiens]
gi|9837566|gb|AAG00603.1|AF291664_1 matrix metalloproteinase-26 [Homo sapiens]
Length = 261
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 56/157 (35%), Gaps = 48/157 (30%)
Query: 58 ALGEWSKVVDLTFEETSIH-SDIKFIS-----SNNGYVCTPRY--------DSRYFMEIN 103
A+ WS V L F++ +DIK + P +S ++
Sbjct: 127 AVSIWSNVTPLIFQQVQNGDADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVH 186
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FDK + W G L A HEIGH+LGL H G+ +S+M
Sbjct: 187 FDKNEHWS-ASDTGYNLFLVATHEIGHSLGLQHSGN-------------------QSSIM 226
Query: 164 --SYFMPQDSMMDASFGYCATPMV--SDIVAVQKIYG 196
+Y+ + T + DI +Q +YG
Sbjct: 227 YPTYW----------YHDPRTFQLSADDIQRIQHLYG 253
>gi|193070431|ref|ZP_03051372.1| RTX C- domain family [Escherichia coli E110019]
gi|192956250|gb|EDV86712.1| RTX C- domain family [Escherichia coli E110019]
Length = 1024
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 45/152 (29%), Gaps = 7/152 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGH 859
Query: 371 LIQVIGQDVFESMK----HFYEFGL-SEGRDI 397
I + + F + EG D+
Sbjct: 860 HIIDDDGGKEDKLSLADIDFRDVAFKREGNDL 891
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G +++ + GND G G DT +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQL----YGGDG 781
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
++L+ + D+ N +++L + L G D+ +
Sbjct: 782 NDKLIGGAGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 27/158 (17%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDDL++ G + Y D ++ S G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDLIEG-NDGNDRLYGDKGNDTLS---GGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGN---------DVFDGSSGLDTFFYYAPS 313
+GN+ + G + NV GN D+ DG G D +
Sbjct: 789 AGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+Y+ I+ D + K+D LS + + F D
Sbjct: 849 DIYRYLSGYGHHIIDD-DGGKEDKLSLAD-IDFRDVAF 884
>gi|115610712|ref|XP_781575.2| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
gi|115961219|ref|XP_001188043.1| PREDICTED: similar to matrix metalloproteinase 14
[Strongylocentrotus purpuratus]
Length = 509
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 61/194 (31%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDIK 80
W + Y+ D T + + ++ AL WS V LTF + + +DI
Sbjct: 90 WPYTDLTYRLDGTTPDLPAALVN-------QIMALALKAWSDVSSLTFAQVAADQPADIL 142
Query: 81 FIS-----SNNGYVCTPRY--DSRYFMEIN-------FDKADVWRYGIGKGTILSHNALH 126
+ P YF N FD A+ + GI +G L A H
Sbjct: 143 IDFFEADHGDGNPFDGPGAVLAHAYFPNPNPIAGDAHFDDAETYTDGIPQGINLFQVAAH 202
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E GH+LGL H + ++M+ F +
Sbjct: 203 EFGHSLGLGHS-------------------TIDAALMAPF-------YQGYVPDFELHPD 236
Query: 187 DIVAVQKIYGAPKG 200
D+ +Q YG
Sbjct: 237 DVAGIQAHYGQNTN 250
>gi|163739110|ref|ZP_02146522.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161387510|gb|EDQ11867.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 307
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 25/174 (14%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ T++ +GGDD+L GGV + I G + + ++G
Sbjct: 158 RGGSGADTLHGNGGDDVL----RGGVGRDV---------IFGGVGADLLGGGRGNDRLIG 204
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SG+D + G + + + +G+DV G G D F + + +I FE +
Sbjct: 205 GSGSDTIRGGAGVDRLYGGTGDDVMTGGDGADIFVFNEGDHTDRITDFEVGVDRIKLGRG 264
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + DV+ + D Y A+ L++ +S HF
Sbjct: 265 AE-SMDDVDFAQVGDDAAI-----------YFANVTILVEDTAFSELQSADHFL 306
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 11/129 (8%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ T+A + + G G DV+ G S + + G+DV G G D F + L
Sbjct: 135 GDDTVAAGAGNDFLTGGLGADVLRGGSGADTLHGNGGDDVLRGGVGRDVIFGGVGADLLG 194
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
R + +I D + +D + + D+
Sbjct: 195 GGRGNDRLI----GGSGSDTIRG-------GAGVDRLYGGTGDDVMTGGDGADIFVFNEG 243
Query: 378 DVFESMKHF 386
D + + F
Sbjct: 244 DHTDRITDF 252
>gi|91213874|ref|YP_543860.1| hemolysin A [Escherichia coli UTI89]
gi|191170766|ref|ZP_03032318.1| RTX C- domain family [Escherichia coli F11]
gi|300974724|ref|ZP_07172713.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 200-1]
gi|91075448|gb|ABE10329.1| hemolysin A [Escherichia coli UTI89]
gi|190908990|gb|EDV68577.1| RTX C- domain family [Escherichia coli F11]
gi|300308857|gb|EFJ63377.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 200-1]
gi|307629393|gb|ADN73697.1| hemolysin A [Escherichia coli UM146]
gi|315290886|gb|EFU50255.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 153-1]
gi|324010974|gb|EGB80193.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 60-1]
Length = 1024
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 45/152 (29%), Gaps = 7/152 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGH 859
Query: 371 LIQVIGQDVFESMK----HFYEFGL-SEGRDI 397
I + + F + EG D+
Sbjct: 860 HIIDDEGGKDDKLSLADIDFRDVAFKREGNDL 891
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G ++ + GND G G DT + +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKL 785
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
I N +L+ + D+ N +++L + L G D+ +
Sbjct: 786 IGGTGNN----YLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 87/255 (34%), Gaps = 44/255 (17%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD ++ G N + ++ G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDHIE----GNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGN---------DVFDGSSGLDTFFYYAPS 313
+GN+ + G + NV GN D+ DG G D +
Sbjct: 789 TGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS----DVERLRFADQCIDSVNVKQ-RSILEYTASY 368
+Y+ I+ D K D LS D + F + D + K ++L
Sbjct: 849 DIYRYLSGYGHHIIDD-EGGKDDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLSIGHKN 907
Query: 369 E-DLIQVIGQDVFESMKHFYEFGL-SEGRDITFDS----YLYLGSYDDLRNVFGSDRGAA 422
++ + H E +GR IT DS + Y S + + V+G D
Sbjct: 908 GITFKNWFEKESDDLSNHQIEQIFDKDGRVITPDSLKKAFEYQQSNNKVSYVYGHDAS-- 965
Query: 423 ARHYITHGVKEGRNP 437
T+G ++ NP
Sbjct: 966 -----TYGSQDNLNP 975
>gi|182682036|ref|YP_001830196.1| hemolysin-type calcium binding domain-containing protein [Xylella
fastidiosa M23]
gi|182632146|gb|ACB92922.1| Haemolysin-type calcium binding domain protein [Xylella fastidiosa
M23]
Length = 2107
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 35/196 (17%)
Query: 246 NTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
E+ SS+G G N T+ + ++G G+D + G+ N++ +G+DV DG
Sbjct: 1024 TPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDTLYGSGGNDLLLGGAGDDVLDGG 1083
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRF------------ 346
+G + A + + K+ + ++ + D L + F
Sbjct: 1084 TGSNRLEGGAGNDVLKVSYWSADNVLNGGS--GDDLLYGSAYADTYLFNKGDGHDTIIEQ 1141
Query: 347 -ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDITFDSYLY 404
D + + + +D++ +G +K + DS Y
Sbjct: 1142 SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWL------------DSNGY 1189
Query: 405 LGSYDDLRNVFGSDRG 420
+D+ + +D
Sbjct: 1190 RNGNNDIEQIVFADGT 1205
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 35/196 (17%)
Query: 246 NTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
E+ SS+G G N T+ + ++G G+D + G+ N++ +G+DV DG
Sbjct: 1374 TPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDTLYGSGGNDLLLGGAGDDVLDGG 1433
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRF------------ 346
+G + A + + K+ + ++ + D L + F
Sbjct: 1434 TGSNRLEGGAGNDVLKVSYWSADNVLNGGS--GDDLLYGSAYADTYLFNKGDGHDTIIEQ 1491
Query: 347 -ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDITFDSYLY 404
D + + + +D++ +G +K + DS Y
Sbjct: 1492 SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWL------------DSNGY 1539
Query: 405 LGSYDDLRNVFGSDRG 420
+D+ + +D
Sbjct: 1540 RNGNNDIEQIVFADGT 1555
Score = 63.6 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 35/196 (17%)
Query: 246 NTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
E+ SS+G G N T+ + ++G G+D + G+ N++ +G+DV DG
Sbjct: 1724 TPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDTLYGSGGNDLLLGGAGDDVLDGG 1783
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRF------------ 346
+G + A + + K+ + ++ + D L + F
Sbjct: 1784 TGSNRLEGGAGNDVLKVSYWSADNVLNGGS--GDDLLYGSAYADTYLFNKGDGHDTIIEQ 1841
Query: 347 -ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDITFDSYLY 404
D + + + +D++ +G +K + DS Y
Sbjct: 1842 SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWL------------DSNGY 1889
Query: 405 LGSYDDLRNVFGSDRG 420
+D+ + +D
Sbjct: 1890 RNGNNDIEQIVFADGT 1905
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 55/342 (16%), Positives = 94/342 (27%), Gaps = 113/342 (33%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+GG ++ ND SY+ + + S D+ +YG+
Sbjct: 1081 DGGTGSNRLEGGAGNDVLKV---SYWSADNVLNGGSG--------DDL-----LYGSAYA 1124
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTESW 250
+ Y TI + GDD L L G +DL
Sbjct: 1125 ----DTYLFN----KGDGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHD 1176
Query: 251 S-------SIGGYEKN------MTIAQHTVIE---------SVVGSSGNDVVIGNSA--- 285
S GY + A T+ + +G+ GND + G
Sbjct: 1177 SIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDI 1236
Query: 286 ---------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIY 319
+N +GND V +G SG D + A + Y
Sbjct: 1237 LLGGDGDDVLDGGMGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYGSAYADTYLFN 1296
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + D L E + AD + +D++ +G
Sbjct: 1297 KGDGHDTI--IEQSGDDKLVFGEGIAAAD-------------VRLLHQGQDVVLDLGNGH 1341
Query: 380 FE-SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+K + DS Y +D+ + +D
Sbjct: 1342 DSIRLKDWL------------DSNGYRNGNNDIEQIVFADGT 1371
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 55/342 (16%), Positives = 94/342 (27%), Gaps = 113/342 (33%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+GG ++ ND SY+ + + S D+ +YG+
Sbjct: 1431 DGGTGSNRLEGGAGNDVLKV---SYWSADNVLNGGSG--------DDL-----LYGSAYA 1474
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTESW 250
+ Y TI + GDD L L G +DL
Sbjct: 1475 ----DTYLFN----KGDGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHD 1526
Query: 251 S-------SIGGYEKN------MTIAQHTVIE---------SVVGSSGNDVVIGNSA--- 285
S GY + A T+ + +G+ GND + G
Sbjct: 1527 SIRLKDWLDSNGYRNGNNDIEQIVFADGTLWTPETLSSMGLTTLGTLGNDTLNGWQGKDI 1586
Query: 286 ---------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIY 319
+N +GND V +G SG D + A + Y
Sbjct: 1587 LLGGDGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYGSAYADTYLFN 1646
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + D L E + AD + +D++ +G
Sbjct: 1647 KGDGHDTI--IEQSGDDKLVFGEGIAAAD-------------VRLLRQGQDVVLDLGNGH 1691
Query: 380 FE-SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+K + DS Y +D+ + +D
Sbjct: 1692 DSIRLKDWL------------DSNGYRNGNNDIEQIVFADGT 1721
Score = 44.3 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 84/311 (27%), Gaps = 87/311 (27%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+GG ++ ND SY+ + + S D+ +YG+
Sbjct: 1781 DGGTGSNRLEGGAGNDVLKV---SYWSADNVLNGGSG--------DDL-----LYGSAYA 1824
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTESW 250
+ Y TI + GDD L L G +DL
Sbjct: 1825 ----DTYLFN----KGDGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHD 1876
Query: 251 S-------SIGGYEKN------MTIAQHTVIE---------SVVGSSGNDVVIGNSA--- 285
S GY + A T+ + +G+ GND + G
Sbjct: 1877 SIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDI 1936
Query: 286 ---------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIY 319
+N +GND V +G SG DT + A + Y
Sbjct: 1937 LLGGDGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDTLYGSAYADTYLFN 1996
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + D L E L + C + + + +
Sbjct: 1997 KGDGHDTI--IEQSGDDKLVFGEGLHREEACFTRSGDDLSILFNGSEDQVTVAGWFSEAA 2054
Query: 380 FESMKHFYEFG 390
+ ++ G
Sbjct: 2055 HQVESLVFQDG 2065
Score = 37.4 bits (85), Expect = 8.3, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 12/99 (12%)
Query: 271 VVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAII 326
+ G SG+D + G++ + F + G+D SG D + R + +
Sbjct: 1975 LNGGSGDDTLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGEGLHREEACFTRSGDDLS 2034
Query: 327 VYDANEHKQDFLSD--------VERLRFADQCIDSVNVK 357
+ Q ++ VE L F D + S V+
Sbjct: 2035 ILFNGSEDQVTVAGWFSEAAHQVESLVFQDGTVLSGEVE 2073
>gi|284053921|ref|ZP_06384131.1| type I secretion target domain/SCP-like extracellular
domain-containing protein [Arthrospira platensis str.
Paraca]
gi|291570348|dbj|BAI92620.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 1/109 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N TI +++ G ND++ NN+ F + GND G SG D+ + A
Sbjct: 63 FYGNQGNDTIIGGGGNDTLFGGKDNDLLEAGGGNNILFGNLGNDTLIGGSGNDSLYGGAG 122
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + I N++I D + A D +
Sbjct: 123 NDVI-IGGPGNSLISGDKGLDTLTGGGGANQFILAPSTADRDLITDFQP 170
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G Y + TI GG+D L GG N + + + G
Sbjct: 56 NDNTGRIFYG-------NQGNDTIIGGGGNDTL----FGGKDNDLLEAGGGNNILFGNLG 104
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
N T+ + +S+ G +GNDV+IG N++
Sbjct: 105 NDTLIGGSGNDSLYGGAGNDVIIGGPGNSLISG 137
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 21/80 (26%), Gaps = 4/80 (5%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
IA + V + + GN N+ GND G D + +
Sbjct: 44 AIALLAGNDYAVNDNTGRIFYGNQGNDTIIGGGGNDTLFGGKDNDLLEAGGGNNIL---- 99
Query: 321 FENAIIVYDANEHKQDFLSD 340
F N D L
Sbjct: 100 FGNLGNDTLIGGSGNDSLYG 119
>gi|269218354|ref|ZP_06162208.1| putative beta-lactamase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212213|gb|EEZ78553.1| putative beta-lactamase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 588
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 10/160 (6%)
Query: 217 PFIQTIYDSGGDDLLD--------LTLIGGV-KNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ TI GG+D + TL GG + I+ S I G N I
Sbjct: 227 GYNLTIRGGGGNDTITVPEGSSVGFTLSGGAGDDRIN-GGGSGDRILGGVGNDEIKAGGG 285
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ V G SGND + G ++ F SG D G +G D + + E+ +
Sbjct: 286 NDYVSGGSGNDYMDGQDGDDRMFGGSGRDTLYGLNGDDRLSGGDDQDYLEGGKGEDMLYG 345
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
N+ D + A + + + +
Sbjct: 346 GSGNDVLSGGRGDDKIFGGAGDDVSYGGLGSDVAIGGGGA 385
>gi|260831504|ref|XP_002610699.1| hypothetical protein BRAFLDRAFT_202443 [Branchiostoma floridae]
gi|229296066|gb|EEN66709.1| hypothetical protein BRAFLDRAFT_202443 [Branchiostoma floridae]
Length = 174
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 48/160 (30%)
Query: 58 ALGEWSKVVDLTFEE-TSIHSDI--KFISSNNG-----------YVCTPRYDSRYFMEIN 103
AL W+ V L F E TS +DI KF N+G Y + + +
Sbjct: 39 ALEVWANVSGLRFVERTSGDADIMIKFARGNHGDGKGFEGPGGEYAHAFQPPGLDWPDGY 98
Query: 104 FDKADV-------WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
D DV W +G L A+HE GHALGL H
Sbjct: 99 GDDGDVHFDADEYWTLRSPRGVNLFQIAVHEFGHALGLSHTDD----------------- 141
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+++M F +C P D+ A+Q +YG
Sbjct: 142 --PSTIMFPFPV------FRNDFCVHP--DDVRAIQSLYG 171
>gi|209526870|ref|ZP_03275390.1| hypothetical protein AmaxDRAFT_4215 [Arthrospira maxima CS-328]
gi|209492741|gb|EDZ93076.1| hypothetical protein AmaxDRAFT_4215 [Arthrospira maxima CS-328]
Length = 134
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L+ + I L + +I G N TI + + G SG+D++ GN N+ +
Sbjct: 51 DDYLVNDAQGRILLGHQGNDTIIGNSGNDTIYGGQNDDYLNGGSGDDLLFGNRGNDTIYG 110
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYL 315
SGND G G D + + +
Sbjct: 111 GSGNDTIYGGVGNDWIVGGSGNNV 134
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 27/72 (37%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +V + +++G+ N+ +SGND G D + L R + I
Sbjct: 52 DYLVNDAQGRILLGHQGNDTIIGNSGNDTIYGGQNDDYLNGGSGDDLLFGNRGNDTIYGG 111
Query: 329 DANEHKQDFLSD 340
N+ + +
Sbjct: 112 SGNDTIYGGVGN 123
>gi|170052992|ref|XP_001862472.1| matrix metalloproteinase [Culex quinquefasciatus]
gi|167873694|gb|EDS37077.1| matrix metalloproteinase [Culex quinquefasciatus]
Length = 483
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 73/229 (31%), Gaps = 49/229 (21%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW----ALGEWSKVVDLTFEETS--IH 76
WS F+ YK T + Q V R+ A WS V +L F E +
Sbjct: 100 WSKNFLTYKIMNFPTGQP-----------QSVIRYLLDKAFSAWSNVTNLDFAEVTFVDR 148
Query: 77 SDIKFISSNNGYVCTPRYDSRYFM---------------EINFDKADVWRYGIGKGTILS 121
+DI+ + G V R + F ++F+ + G G L
Sbjct: 149 ADIEVVFG--GQVHWSRGERCSFPMDTDVFAHAFYPEEGNVHFNTKYYFDGGESLGQFL- 205
Query: 122 HNALHEIGHALGLMHP-------GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
A+HEIGH LGL H G D +N L V +
Sbjct: 206 EVAMHEIGHVLGLDHSKSKASLMHLTEIGRFTEPQPIDVKNIQRLYGV----RGESMRAA 261
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
S T M A+Q G G+ Y ++ + I + +
Sbjct: 262 GSRLCSLTAMD---AAIQTSDGVIYVFAGDYFYDVKNKFAPGKLISSKW 307
>gi|260220565|emb|CBA28230.1| hypothetical protein Csp_A06240 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 4403
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 16/138 (11%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD L+++ + I G + N I H I+ + G G++++ +
Sbjct: 3385 GDDTLNVSGRDVAQRIF---------IEGEQGNDIIVGHDGIDLIRGGGGDNLISAGKGD 3435
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-------DANEHKQDFLS 339
+ GND DG G DT + P KI + +I + D
Sbjct: 3436 DQVVIRGGNDAIDGGEGTDTLRFDLPGQEKKITVDASGVIHVYSASGSWNTGSFVPDTNG 3495
Query: 340 DVERLRFADQCIDSVNVK 357
VER R A + +
Sbjct: 3496 WVERYRLASDYGTDGSNR 3513
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+ S N+ + + +++ G+D + G++ ++ F G+D + +G D
Sbjct: 4047 QGSFRSDTFDVSNVAVDKRVLVK---AGYGSDTITGHAGSDEIFGEGGSDSINAGAGDDL 4103
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + I + A+ H D V+
Sbjct: 4104 IWLSGGND---ILNGGDGTDALGAHLHGADARGWVD 4136
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D D++ + K + + + TI H + + G G+D + + ++
Sbjct: 4052 SDTFDVSNVAVDKRVL---------VKAGYGSDTITGHAGSDEIFGEGGSDSINAGAGDD 4102
Query: 288 VFFESSGNDVFDGSSGLDTF 307
+ + S GND+ +G G D
Sbjct: 4103 LIWLSGGNDILNGGDGTDAL 4122
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 71/232 (30%), Gaps = 22/232 (9%)
Query: 264 QHTVIESVVGSSGNDV-----VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
Q ++ + + SG DV + G N++ G D+ G G + I
Sbjct: 3381 QGSLGDDTLNVSGRDVAQRIFIEGEQGNDIIVGHDGIDLIRGGGGDNLISAGKGDDQVVI 3440
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+AI + + + L E+ D + D + +
Sbjct: 3441 RGGNDAIDGGEGTDTLRFDLPGQEKKITVDASGVIHVYSASGSWNTGSFVPDTNGWVERY 3500
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
S + G R FD L ++ +R + GRN +
Sbjct: 3501 RLAS--DYGTDGS--NRIAVFD----LALGRNVAMAKNMERL----QWRLDDNSSGRNTN 3548
Query: 439 AFK----ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
FK + +++ + ++ + + G H +++ E R + D
Sbjct: 3549 TFKVGTAGDDALSAADVVLAGTGNDTITLSSGWLHTNDW-RYENRALLIDGG 3599
>gi|254439650|ref|ZP_05053144.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198255096|gb|EDY79410.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 316
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 15/182 (8%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
YG G G+++ + + GG+D L D + GG +
Sbjct: 90 YGEFFGDDGDDV------AEGQSGHDYLDGRGGNDTLLGGEGDDHIHGGAGEDSLSGDDG 143
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ GY + ++ T +++ G G+DV+ G S ++ G+D G +G D
Sbjct: 144 DDLVYGYIGDDDLSGGTGNDTLHGGDGDDVINGGSDSDELLGGYGDDTLIGGAGRDNIQG 203
Query: 310 YAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYT 365
+ + E+ A Y QD L + AD + I++Y
Sbjct: 204 SEGNDVLDGVTGEDIAKTDYLNGSEGQDTLIGNDGDVMSGGADADRFEITGGTVFIMDYA 263
Query: 366 AS 367
Sbjct: 264 DD 265
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 22/111 (19%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS-------------- 293
E + G + + + + + G GND ++G ++ +
Sbjct: 88 EGYGEFFGDDGDDVAEGQSGHDYLDGRGGNDTLLGGEGDDHIHGGAGEDSLSGDDGDDLV 147
Query: 294 ----GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G+D G +G DT + + D L
Sbjct: 148 YGYIGDDDLSGGTGNDTLHGGDGDD----VINGGSDSDELLGGYGDDTLIG 194
>gi|119488097|ref|ZP_01621541.1| hypothetical protein L8106_11887 [Lyngbya sp. PCC 8106]
gi|119455386|gb|EAW36525.1| hypothetical protein L8106_11887 [Lyngbya sp. PCC 8106]
Length = 1102
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 9/117 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD++D G DLN S G N TI + + G +GND + G+ +
Sbjct: 942 GDDIIDG-GEGDDVLRGDLNRR--SPGGNIGGNDTINGGLGDDRIGGKAGNDALFGDEGD 998
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ F G+D+ G G D + A A D ++D E
Sbjct: 999 DEIFGDDGDDLLRGGLGDDVLTGD------DFSGGQGADTFVLAIGEGTDIITDFEV 1049
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 46/131 (35%), Gaps = 19/131 (14%)
Query: 222 IYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I D G GDD+L L N +I G + I +++ G G+D +
Sbjct: 945 IIDGGEGDDVLRGDLNRRSPGG---NIGGNDTINGGLGDDRIGGKAGNDALFGDEGDDEI 1001
Query: 281 IGNSANNVFFESSGNDVF-----DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+ +++ G+DV G G DTF I FE
Sbjct: 1002 FGDDGDDLLRGGLGDDVLTGDDFSGGQGADTFVLAIGEGTDIITDFE----------VGI 1051
Query: 336 DFLSDVERLRF 346
DF+ E L F
Sbjct: 1052 DFIGLTEGLSF 1062
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 2/155 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N S S+ + I + E+++G+ ND+++ + +++ G+D+ DG G D
Sbjct: 894 NEVSGSTTVYDFGSDAIIGSSGDETLLGTDNNDLILAEAGDDLVAGLLGDDIIDGGEGDD 953
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
N I + + + + L F D+ D + L
Sbjct: 954 VLRGDLNRRSPGGNIGGNDTINGGLGDDRIGGKAGNDAL-FGDEGDDEIFGDDGDDLLRG 1012
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+D++ + F + EG DI D
Sbjct: 1013 GLGDDVLTGDDFSGGQGADTFVL-AIGEGTDIITD 1046
>gi|119490529|ref|ZP_01622971.1| hypothetical protein L8106_07856 [Lyngbya sp. PCC 8106]
gi|119453857|gb|EAW35013.1| hypothetical protein L8106_07856 [Lyngbya sp. PCC 8106]
Length = 716
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 62/186 (33%), Gaps = 14/186 (7%)
Query: 224 DSGGDDLLDLTLI---GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D+ D LD + I G+ IDL + G + I +++ G GND V
Sbjct: 475 DTLIGDTLDESEIESERGLSGMIDL-------LWGGAGDDFINGGRSNDTLSGGVGNDTV 527
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G +++ + +G+D+ G G D + +N + DA
Sbjct: 528 RGGKEDDLIYGEAGDDLMYGDLGNDQLCGNEGNDTLYGDINDNQ-TISDAPGRDTICGGS 586
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQD--VFESMKHFYEFGLSEGRDI 397
+ F D+ D + + Y S ED L G D + G R I
Sbjct: 587 GNDMLFGDRDQDRLCGGEDGDTLYGGSGEDTLAGEQGDDWLFGDEGDDLISGGTGRDRFI 646
Query: 398 TFDSYL 403
F
Sbjct: 647 LFSGGG 652
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 12/141 (8%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L N ID + + + G + + + + GND + G N++ F +
Sbjct: 329 SLFNAFDNVIDGSDNADDIVAGSLGSDVVFAFGGDDRIEAFDGNDTMYGGVGNDLQFGNQ 388
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL--SDVERLRFADQCI 351
GND G G DT I N + AN D L + L
Sbjct: 389 GNDFILGGDGRDTL----------IGTEGNNGLAASANVEDNDTLHGHGNDDLMQGGPGA 438
Query: 352 DSVNVKQRSILEYTASYEDLI 372
D + ++ + +D+I
Sbjct: 439 DLMFSGKQDDFAFGGKNDDMI 459
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 18/123 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ GN+ ++ QTI D+ G D + GG N + + G
Sbjct: 556 GNEGNDTLYGDINDN-----QTISDAPGRDTI----CGGSGNDM---------LFGDRDQ 597
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +++ G SG D + G ++ F G+D+ G +G D F ++ I
Sbjct: 598 DRLCGGEDGDTLYGGSGEDTLAGEQGDDWLFGDEGDDLISGGTGRDRFILFSGGGTDTIQ 657
Query: 320 RFE 322
F+
Sbjct: 658 DFQ 660
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 7/156 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ + + D G D D + G + + + I ++ N T+
Sbjct: 323 RLNLTPSLFNAFDNVID--GSDNADDIVAGSLGSDVVFAFGGDDRIEAFDGNDTMYGGVG 380
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---LDTFFYYAPSYLYKIYRFENA 324
+ G+ GND ++G + + GN+ S+ DT + L + A
Sbjct: 381 NDLQFGNQGNDFILGGDGRDTLIGTEGNNGLAASANVEDNDTLHGHGNDDL--MQGGPGA 438
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+++ + F + + F DQ D+++ Q +
Sbjct: 439 DLMFSGKQDDFAFGGKNDDMIFGDQGNDTLHGDQGN 474
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 7/183 (3%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y Q + I G D L + G N E ++ G+ +
Sbjct: 373 DTMYGGVGNDLQFGNQGNDFILGGDGRDTL-IGTEGNNGLAASANVEDNDTLHGHGNDDL 431
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-YKIYR 320
+ + + +D G +++ F GND G G DT + R
Sbjct: 432 MQGGPGADLMFSGKQDDFAFGGKNDDMIFGDQGNDTLHGDQGNDTLIGDTLDESEIESER 491
Query: 321 FENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ +I DF++ + L K+ ++ A + + +G
Sbjct: 492 GLSGMIDLLWGGAGDDFINGGRSNDTLSGGVGNDTVRGGKEDDLIYGEAGDDLMYGDLGN 551
Query: 378 DVF 380
D
Sbjct: 552 DQL 554
>gi|326672700|ref|XP_001342721.4| PREDICTED: matrix metalloproteinase-21-like [Danio rerio]
Length = 599
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 75/202 (37%), Gaps = 42/202 (20%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEETS----IHS 77
W+ + K + ++L+ + + R A WS++ L F E +
Sbjct: 191 WTGHMAFSKSVLKWRLIGEGYSSQLSIQEQKYIFRLAFRMWSEISPLQFIEDLHSPLENI 250
Query: 78 DIKFISSNNGYVC-TPRYDSR--------YFMEINFDKADVWR-YGIGKGTILSHNALHE 127
DI+ ++ + R+D + +I+FD + + G G L A+HE
Sbjct: 251 DIRLGFGTGRHLGCSQRFDGAGREFAHAWFLGDIHFDDDEHFTVPNTGSGISLLKVAVHE 310
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
IGH LGL P Y G S+M Q S + G+ M D
Sbjct: 311 IGHVLGL--PHIYRPG-----------------SIM-----QPSYLPQDAGFEIDWM--D 344
Query: 188 IVAVQKIYGAPKGSLGNNIYKI 209
++Q++YG G + ++
Sbjct: 345 RKSIQRLYGVCTGRF-STVFDW 365
>gi|290343622|ref|YP_003494989.1| hypothetical protein OTV1_150 [Ostreococcus tauri virus 1]
gi|260161037|emb|CAY39738.1| hypothetical protein OTV1_150 [Ostreococcus tauri virus 1]
Length = 174
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 17/134 (12%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGL--SEGRD---ITFD--SYLYLGSYDDLRNVF 415
Y A + DL G D H+ + SE R+ D + YL Y D +
Sbjct: 36 CYGARHWDLRAAFGTDGDALGSHYTTYTTNGSENRNNSCTLSDEEAQCYLDRYPDAKTYA 95
Query: 416 GSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPDL------VQV 465
G+D A +HY G+ + R+ + Y+ + DL AF +
Sbjct: 96 GTDLKKARKHYYETGMAQNRDFACGLSVKELQCYVERYPDLQTAFGTDYAARGTDKTLYK 155
Query: 466 GKDHFSNFGCEEGR 479
H+ +G E R
Sbjct: 156 AGVHWDTYGKGEDR 169
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 20/142 (14%)
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF-----VTFDSYLYLGSYDDLR 496
Y A H DL AF D + ++ G E R ++ YL Y D +
Sbjct: 34 NECYGARHWDLRAAFGTDGDALGSHYTTYTTNG-SENRNNSCTLSDEEAQCYLDRYPDAK 92
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALE----YIASHEDLINAFADAPDLVQAGKD 552
G+D A +HY G+ + R+ +++ Y+ + DL AF D G D
Sbjct: 93 TYAGTDLKKARKHYYETGMAQNRDFACGLSVKELQCYVERYPDLQTAFG--TDYAARGTD 150
Query: 553 --------HFSNFGYEEGRSIT 566
H+ +G E R +
Sbjct: 151 KTLYKAGVHWDTYGKGEDRDYS 172
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 23/142 (16%)
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVK--EGRNPDAF----KALEYIASHEDLINAF 540
Y + DLR FG+D A HY T+ E RN +A Y+ + D
Sbjct: 36 CYGARHWDLRAAFGTDGDALGSHYTTYTTNGSENRNNSCTLSDEEAQCYLDRYPDAKTYA 95
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT-----FNPDLYLTSYDDLWNVFGSDRSA------ 589
++ + H+ G + R Y+ Y DL FG+D +A
Sbjct: 96 GTD---LKKARKHYYETGMAQNRDFACGLSVKELQCYVERYPDLQTAFGTDYAARGTDKT 152
Query: 590 ---AAQHYITHGMKEGRALGIS 608
A H+ T+G E R
Sbjct: 153 LYKAGVHWDTYGKGEDRDYSCP 174
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-----TFDS 401
++ +S + Y Y D G D+ ++ KH+YE G+++ RD +
Sbjct: 67 SENRNNSCTLSDEEAQCYLDRYPDAKTYAGTDLKKARKHYYETGMAQNRDFACGLSVKEL 126
Query: 402 YLYLGSYDDLRNVFGSDRGA---------AARHYITHGVKEGRN 436
Y+ Y DL+ FG+D A A H+ T+G E R+
Sbjct: 127 QCYVERYPDLQTAFGTDYAARGTDKTLYKAGVHWDTYGKGEDRD 170
>gi|256078917|ref|XP_002575739.1| matrix metallopeptidase-7 (M10 family) [Schistosoma mansoni]
gi|238660985|emb|CAZ31973.1| matrix metallopeptidase-7 (M10 family) [Schistosoma mansoni]
Length = 454
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 67/198 (33%), Gaps = 53/198 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W+ + ++ +H LS A V + WS+VV+L F E
Sbjct: 176 WTKKQLTWQIQSYPSHSLSR------VRAHAVFQHTFNLWSRVVNLDFMEEKDYYKPADI 229
Query: 73 -----TSIHSD-IKFISSNN----GYVCTPRYDSRYFMEINFDKADVWRYGI-GKGTILS 121
H D I F + Y TP + + +FD ++W G L
Sbjct: 230 VIQFGAGKHGDSIPFDGAGGVLAHAYYPTPDNVYSFSGDAHFDDDEIWNDGPHKTHRNLI 289
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE+GH+LGL H S T++M + +
Sbjct: 290 SVAAHELGHSLGLGHS-------------------SVPTAIMYPYYTRTWEK-------V 323
Query: 182 TPMVSDIVAVQKIYGAPK 199
DI +Q+IYGA K
Sbjct: 324 KLDPDDIAGIQQIYGAAK 341
>gi|114640100|ref|XP_001153816.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
Length = 472
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 55/189 (29%), Gaps = 48/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNHTPDLPR-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D + G+ Y + +I+FD + W GT L A HE
Sbjct: 161 SFAVKEHGDF-YSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHE 218
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + +M Y + A F D
Sbjct: 219 LGHSLGLFHSANTEA-------------------LM-YPLYNSFTELAQFRLSQ----DD 254
Query: 188 IVAVQKIYG 196
+ +Q +YG
Sbjct: 255 VNGIQSLYG 263
>gi|166367763|ref|YP_001660036.1| Na-Ca exchanger/integrin-beta4 like [Microcystis aeruginosa
NIES-843]
gi|166090136|dbj|BAG04844.1| Na-Ca exchanger/integrin-beta4 like [Microcystis aeruginosa
NIES-843]
Length = 979
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 61/177 (34%), Gaps = 13/177 (7%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV----------VGSSGN 277
D+ +TL V I + + E +++ +E++ G++GN
Sbjct: 769 DETFTVTLSNPVNATIARAMATITITDTLESDVSTVLTNGLENLQLTGTNPINGTGNAGN 828
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ + GNS NN+ GND G++G DT A + + + DF
Sbjct: 829 NRITGNSGNNILNGDLGNDTLAGNAGNDTLTGGAGIDQIEYRSTRAFVASDFGVDTISDF 888
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + +++ + ++ + + V + + F + G
Sbjct: 889 VVNQDKIVLSKTTFAALTSGVGNGFN---QPSNFAVVANNSLVAASNAFIVYSSGTG 942
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 9/95 (9%)
Query: 229 DLLDLTLIGGVKNYID-LNTESWSSIGGYEKNMTIAQH--------TVIESVVGSSGNDV 279
D + N +D L + ++ G E N I + E + G+ G+D
Sbjct: 4 DTVTGNGTVITGNKVDTLISIERCNLFGTEDNDFILGGWGSDSLLFSTSEGLRGNGGDDT 63
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ GNS ++ F GND G G D +
Sbjct: 64 IDGNSGEDLLFGEDGNDFLIGGWGSDALVGGDDND 98
>gi|112789936|gb|ABI21610.1| Smu14 [uncultured organism]
Length = 467
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 9/183 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + G+D L GG + L + G +N ++ +
Sbjct: 257 NDTLNGASGNDMLDGGDGNDTLS----GGSGVDVLLGGLGDDQLSGGTENDSLDGGDGND 312
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +GNDV++ N+ S GND G G D + Y R + + +
Sbjct: 313 VLNGDAGNDVLVAGLGNDTLNGSDGNDSLTGGVGNDLLQGGNNADTYYFNRGDGVDTLQE 372
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + SD + + + + +T DL+ +GQ + K++Y
Sbjct: 373 SGDW-----SDTANYGGSADKVVFGPGIAVADITFTHVGNDLVMDLGQGDKLTFKNWYVV 427
Query: 390 GLS 392
G
Sbjct: 428 GSY 430
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 9/179 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
P +++ G+D ++IG N + ++ G N T+ I+ + G
Sbjct: 33 GSDPAGNSLFGLSGND----SIIGNTGNDTLSGGDGDDALTGRGGNDTLDGGDGIDVLNG 88
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GNDV++ N+ S GND G G D + Y R + + ++ +
Sbjct: 89 DAGNDVLVAGLGNDTLNGSDGNDSLTGGVGNDLLQGGNNADTYYFNRGDGVDTLQESGDW 148
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
SD + + + + +T DL+ +GQ + K++Y G
Sbjct: 149 -----SDTANYGGSADKVVFGPGIAVADITFTHVGNDLVMDLGQGDKLTFKNWYVVGSY 202
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 11/137 (8%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSSGL 304
G ++ I S+ G SGND +IGN+ N+ GND DG G+
Sbjct: 24 GSLCDDVLIGSDPAGNSLFGLSGNDSIIGNTGNDTLSGGDGDDALTGRGGNDTLDGGDGI 83
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D A + + + + D N+ + + L D+ + ++
Sbjct: 84 DVLNGDAGNDVLVAGLGNDTLNGSDGNDSLTGGVGN--DLLQGGNNADTYYFNRGDGVDT 141
Query: 365 TASYEDLIQVIGQDVFE 381
D
Sbjct: 142 LQESGDWSDTANYGGSA 158
>gi|34395495|sp|Q44492|ALGE5_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 5; AltName:
Full=Mannuronan epimerase 5
gi|790689|gb|AAA87309.1| mannuronan C-5-epimerase [Azotobacter vinelandii]
Length = 997
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL+ G +D + G + N T+ + E ++G +GND + G + N++
Sbjct: 809 DLSAFTGANLILDERV----VLEGSDGNDTLDGGSAAEELLGGAGNDSLDGGAGNDILDG 864
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+G D G SG D F Y + F N + DF + + +
Sbjct: 865 GAGRDTLSGGSGSDIFRY-----DDALDSFRNYGTGVTGTDTITDFTPGEDLIDLS 915
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDL-NTESWSS 252
G N+ Y I+ ++ D ++Y + ++ + L G DL T ++
Sbjct: 327 GNTIVGSANSTYGIQ-ERADGTDYSSLYANSVSNVQSGSVRLYGTNSVVSDLPGTGQQAT 385
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ E+++G GND + G + N++ +G D G +G D F A
Sbjct: 386 LEGTTGNDTLTGSEAHETLLGLDGNDRLNGGAGNDILDGGAGRDNLTGGAGADLFRVSAR 445
Query: 313 SYLYKIY--RFENAIIVYDANEHKQDF 337
+ Y+ F + I +D + + D
Sbjct: 446 TDSYRTDSASFNDLITDFDPAQDRIDL 472
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 5/123 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + + E+++G +GND + G +++ +G D G +G D F + A
Sbjct: 537 IEGDAGNNALLGTSAAETLLGHAGNDTLDGAGGDDILVGGAGRDTLTGGAGADLFRFDAL 596
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-----QCIDSVNVKQRSILEYTAS 367
S + Y + + + DV L F +V V Y S
Sbjct: 597 SDSQRNYTTGDNQGDRIVDFSVGEDKLDVSALGFTGLGDGYNGTLAVVVNSAGDRTYVKS 656
Query: 368 YED 370
YE
Sbjct: 657 YET 659
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 17/139 (12%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
NY DL +ES+ A + + + GS+GND + G +A+ + +G
Sbjct: 668 FSLEGNYQDLGSESF----------VFATPSGQQLLEGSAGNDSLQGTAADEIVHGGAGR 717
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-----QC 350
D G +G D F + + Y+ A ++ D D D+ L F+
Sbjct: 718 DTLSGGAGADVFRFSELTDSYRTASTSFADLITD--FDLADDRIDLSGLGFSGLGDGYDG 775
Query: 351 IDSVNVKQRSILEYTASYE 369
+V V Y SYE
Sbjct: 776 TLAVVVNSTGTRTYLKSYE 794
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 39/81 (48%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +++G+S + ++G++ N+ + G+D+ G +G DT A + L++
Sbjct: 536 VIEGDAGNNALLGTSAAETLLGHAGNDTLDGAGGDDILVGGAGRDTLTGGAGADLFRFDA 595
Query: 321 FENAIIVYDANEHKQDFLSDV 341
++ Y +++ D + D
Sbjct: 596 LSDSQRNYTTGDNQGDRIVDF 616
>gi|119488995|ref|ZP_01621930.1| type I secretion target repeat protein [Lyngbya sp. PCC 8106]
gi|119454951|gb|EAW36094.1| type I secretion target repeat protein [Lyngbya sp. PCC 8106]
Length = 1525
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 1/129 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G E N IA + + + G G+D + GN N+ + G D+ +G G D
Sbjct: 770 NISGGEGNDAIAGNEDNDIISGGLGDDKITGNDGNDQIEGNGGQDLIEGGLGEDNISGGD 829
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ K +N II D+ + + + + D + L + +
Sbjct: 830 GDDILK-GNQDNDIIKGDSGNDQIEGNDGNDIIEGNDGDDSISGGVGQDELYGNDGNDQI 888
Query: 372 IQVIGQDVF 380
G+D
Sbjct: 889 NGDAGKDSL 897
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 53/164 (32%), Gaps = 19/164 (11%)
Query: 244 DLNTESWSSIGG------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
D N +S +GG + + T+ T ++++G GND +IG N+ GND
Sbjct: 1016 DANDNKFSGLGGNDYIDGRDGDDTLDGGTGDDNLIGGKGNDSLIGQDGNDDLDGQEGNDF 1075
Query: 298 FDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
DG G D A Y DFLS E +
Sbjct: 1076 LDGGKGEDVLLGEAGDDTLYGQADGDDLDGGEGHDYLDGGEGDDFLSGREGHD------E 1129
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
+ L + + L G DV E+ K G E
Sbjct: 1130 LFGREGDDYLSGGSGNDTLQGEAGMDVLFGEAGKDILYGGTGED 1173
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 62/201 (30%), Gaps = 17/201 (8%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ +Y + IY G D L D + GG N I I G+
Sbjct: 542 DTLYGEDESDKIHGDGGNDYIYGGNGWDELQGHGDDDYISGGEGNDI---------IHGH 592
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I ++ + G +D++ G +++ GND G G D
Sbjct: 593 QGQDEIHGGGGLDFISGGDESDILYGEDESDIIHGDGGNDSIYGGEGWDEIQGNDGDDYL 652
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQVI 375
+ ++ I + +++ D E F + + Y +D L +
Sbjct: 653 RGEGGKDLIFGGNGDDNITGGDGDDEIWGFYGNDLIFGDSGFGHDKIYGEYGDDSLYGRV 712
Query: 376 GQDVFESMKHFYEFGLSEGRD 396
G D + EG D
Sbjct: 713 GNDSISGGDDQDQIFGEEGAD 733
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 6/112 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N I + + + G+ G+D + G + + + GND +G +G D+ +
Sbjct: 843 IKGDSGNDQIEGNDGNDIIEGNDGDDSISGGVGQDELYGNDGNDQINGDAGKDSLYGGNG 902
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSIL 362
+ L E+ + +D LS E L + D+ D++
Sbjct: 903 ADLLAGDDGEDEVY----GNDGEDTLSGGEADDLLYGDKDNDTIYGDNGDDF 950
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 55/163 (33%), Gaps = 14/163 (8%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
A +YG + IY +I GDD + DL T
Sbjct: 929 ADDLLYGDKDN---DTIYGDNGDDFIVGGEGADSINGGEGDDTASF-FTSSLGVIADLTT 984
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G + ++ IE++ GS D +IG++ +N F GND DG G DT
Sbjct: 985 GGGGGSGDSRGD----RYEGIENLEGSEFRDRLIGDANDNKFSGLGGNDYIDGRDGDDTL 1040
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ +++I D N D L E F D
Sbjct: 1041 DGGTGDDNLIGGKGNDSLIGQDGN----DDLDGQEGNDFLDGG 1079
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 2/156 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D +D G +++ I GY+ I ++ + G +D + G +
Sbjct: 492 GGDGIDEINGNGGDDFLH-GEGGGDIIHGYQGQDEIHGGGGLDFISGGDESDTLYGEDES 550
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ GND G +G D + Y N II + + ++ +
Sbjct: 551 DKIHGDGGNDYIYGGNGWDELQGH-GDDDYISGGEGNDIIHGHQGQDEIHGGGGLDFISG 609
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D+ + I+ + + G D +
Sbjct: 610 GDESDILYGEDESDIIHGDGGNDSIYGGEGWDEIQG 645
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 33/77 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +++ G GND + G N+ GND+ G G++T +
Sbjct: 1382 LYGQGGDDELTGEAGKDTLDGGLGNDTLNGGEHNDRLIGGDGNDILAGGEGVNTLTGGSG 1441
Query: 313 SYLYKIYRFENAIIVYD 329
++++ + ++ D
Sbjct: 1442 QDEFELFFGDGYQLILD 1458
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 41/141 (29%), Gaps = 11/141 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L GG I L + + G + N + +++ G ND + G ++
Sbjct: 1334 DDILDGGDGQDILLGDDGNDELFGGKHNDLLDGGEGQDTLSGGENNDQLYGQGGDDELTG 1393
Query: 292 SSGNDVFDGSSGLDTFFYYA------PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+G D DG G DT I + + +F L
Sbjct: 1394 EAGKDTLDGGLGNDTLNGGEHNDRLIGGDGNDILAGGEGVNTLTGGSGQDEF-----ELF 1448
Query: 346 FADQCIDSVNVKQRSILEYTA 366
F D ++ A
Sbjct: 1449 FGDGYQLILDFLPSQDSFKLA 1469
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 60/187 (32%), Gaps = 18/187 (9%)
Query: 200 GSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWS 251
G G++ + ++ G+D LD L GG + L
Sbjct: 1033 GRDGDDTLDGGTGDDNLIGGKGNDSLIGQDGNDDLDGQEGNDFLDGGKGEDVLLGEAGDD 1092
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + G G+D + G ++ F G+D G SG DT A
Sbjct: 1093 TLYGQADGDDLDGGEGHDYLDGGEGDDFLSGREGHDELFGREGDDYLSGGSGNDTLQGEA 1152
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
F A +D L ++ F D + R L+ +DL
Sbjct: 1153 GMD----VLFGEAGKDILYGGTGEDSLFGGDQNDFLDGG------EDRDFLDGGNGNDDL 1202
Query: 372 IQVIGQD 378
G+D
Sbjct: 1203 YGRQGED 1209
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 7/144 (4%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + Q + GG+D D G + + ++ G + N I
Sbjct: 1164 DILYGGTGEDSLFGGDQNDFLDGGEDR-DFLDGGNGNDDLYGRQGED-TLYGGKGNDFIW 1221
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--- 320
+ +++ G GND++ G N++ G D G +G DT + L
Sbjct: 1222 GNEDKDTLYGDEGNDILDGGEDNDILDGGDGRDELWGQTGEDTLYGGNGHDLLDGGEDSD 1281
Query: 321 --FENAIIVYDANEHKQDFLSDVE 342
D L+ E
Sbjct: 1282 QLNGGTGHDKLYGRQGADDLTGGE 1305
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 8/136 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S +G + + + + ++G NDV+ GN +++ SG D+ DG G+D Y
Sbjct: 370 SRLGTEDDDWIVGSSESNDQLLGLGRNDVLRGNDGDDILVGGSGYDLLDGGEGIDIADYS 429
Query: 311 APSYLYK--------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ I + D + DVE ++ + + +
Sbjct: 430 SYPSSLTPEGIVVNPSQVAGVEIYEINDGWGTTDTVLDVEIIQGSLHRDVMNGFDHKRDI 489
Query: 363 EYTASYEDLIQVIGQD 378
Y D I G D
Sbjct: 490 FYGGDGIDEINGNGGD 505
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 10/192 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFI---QTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW 250
+G+ GN+I + +Y + G+D ++ +L GG + +
Sbjct: 853 EGNDGNDIIEGNDGDDSISGGVGQDELYGNDGNDQINGDAGKDSLYGGNGADLLAGDDGE 912
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + T++ + + G ND + G++ ++ G D +G G DT ++
Sbjct: 913 DEVYGNDGEDTLSGGEADDLLYGDKDNDTIYGDNGDDFIVGGEGADSINGGEGDDTASFF 972
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + + + D +E L ++ + + +
Sbjct: 973 --TSSLGVIADLTTGGGGGSGDSRGDRYEGIENLEGSEFRDRLIGDANDNKFSGLGGNDY 1030
Query: 371 LIQVIGQDVFES 382
+ G D +
Sbjct: 1031 IDGRDGDDTLDG 1042
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 14/111 (12%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+Y G+D + TL G N I + G E N + + + G
Sbjct: 1209 DTLYGGKGNDFIWGNEDKDTLYGDEGNDI---------LDGGEDNDILDGGDGRDELWGQ 1259
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+G D + G + +++ +D +G +G D + + ++++
Sbjct: 1260 TGEDTLYGGNGHDLLDGGEDSDQLNGGTGHDKLYGRQGADDLTGGEGKDSL 1310
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 27/98 (27%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ + G+ G+D + G ++ G D G GLD S
Sbjct: 490 FYGGDGIDEINGNGGDDFLHGEGGGDIIHGYQGQDEIHGGGGLDFISGGDESDTLYGEDE 549
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ I N++ E D S
Sbjct: 550 SDKIHGDGGNDYIYGGNGWDELQGHGDDDYISGGEGND 587
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 57/204 (27%), Gaps = 26/204 (12%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK------NYIDLNTESWSS-IGGY 256
+ +Y E GGD +L G + L+ S + G
Sbjct: 1227 DTLYGDEGNDILDGGEDNDILDGGDGRDELWGQTGEDTLYGGNGHDLLDGGEDSDQLNGG 1286
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIG------------------NSANNVFFESSGNDVF 298
+ + + + G G D + G A+++ G D+
Sbjct: 1287 TGHDKLYGRQGADDLTGGEGKDSLWGHEDSDHLRGDGGDDYLDGGQADDILDGGDGQDIL 1346
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G D F + L ++ + + N+ D E A + +
Sbjct: 1347 LGDDGNDELFGGKHNDLLDGGEGQDTLSGGENNDQLYGQGGDDELTGEAGKDTLDGGLGN 1406
Query: 359 RSILEYTASYEDLIQVIGQDVFES 382
+ L + LI G D+
Sbjct: 1407 DT-LNGGEHNDRLIGGDGNDILAG 1429
>gi|298379219|ref|ZP_06989100.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|298280332|gb|EFI21836.1| conserved hypothetical protein [Escherichia coli FVEC1302]
Length = 1040
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 816 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 869
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 870 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 929
Query: 319 YRFENAII 326
+ ++
Sbjct: 930 GGNGSDVV 937
>gi|284053367|ref|ZP_06383577.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 147
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 7/121 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND + GN +N+ F GND G +G +T +Y + + +
Sbjct: 1 DTIYGGQGNDTIRGNDGDNLLFGDLGNDFLYGGAGRNTLMGGEGDDIYFLDPIHRSSQLR 60
Query: 329 DANEHKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D D + + F I + L DL +
Sbjct: 61 DV-----DEIRGFNVVNNPFFGDKIAVPVGTRIDELSLERDRPDLRPSQNDVNGNGLNDI 115
Query: 387 Y 387
Sbjct: 116 I 116
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+I G + N TI + + G GND + G + N G+D++
Sbjct: 2 TIYGGQGNDTIRGNDGDNLLFGDLGNDFLYGGAGRNTLMGGEGDDIYF 49
>gi|254473578|ref|ZP_05086974.1| 5'-nucleotidase [Pseudovibrio sp. JE062]
gi|211957290|gb|EEA92494.1| 5'-nucleotidase [Pseudovibrio sp. JE062]
Length = 439
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 53/164 (32%), Gaps = 7/164 (4%)
Query: 204 NNIYKIEVQQKDSPFIQTIYD---SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
N +Y ++ + G D LD Y + N
Sbjct: 253 NGLYGLDGDDHLEGGGGDDWLNAYGSGSDYLDGGSGNDTVRYRWSEAAVTVDLADQANNT 312
Query: 261 TIAQHTV---IESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
A IE+V+G+ +D++IG++ NN + GND G G DTF +
Sbjct: 313 GDAAGDTYVSIENVMGTDKFDDIIIGDAGNNKLWGYGGNDTLTGGDGNDTFLFETNFEHD 372
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
I F D +D E + + + V Q +
Sbjct: 373 TITDFTVGAGSDDTIRFTEDSFVSFEDVLATASQVGTDTVIQLN 416
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I L + + ++ + +++V ++GND + G ++ SGND+ G +
Sbjct: 3 IQLGSGDENYSTTSSEDHHVLAGAGNDTIVTAAGNDQLYGEEGDDYLDGGSGNDILSGGA 62
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
G +T+F+ I + +V D +
Sbjct: 63 GHNTYFFDRDYDKDVIKDTLGSDVVKFGAGITMDNIR 99
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 48/161 (29%), Gaps = 22/161 (13%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
++L T S + T I V GS ND +IG+ NN + G
Sbjct: 206 NNSAEAVSVNLATGEMSGGDAEGDQL-----TNISQVFGSEHNDTIIGDDNNNGLYGLDG 260
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----------------DANEHKQDFL 338
+D +G G D Y Y N + Y + + D
Sbjct: 261 DDHLEGGGGDDWLNAYGSGSDYLDGGSGNDTVRYRWSEAAVTVDLADQANNTGDAAGDTY 320
Query: 339 SDVERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQD 378
+E + D+ D + + L + L G D
Sbjct: 321 VSIENVMGTDKFDDIIIGDAGNNKLWGYGGNDTLTGGDGND 361
>gi|327254817|gb|EGE66433.1| hemolysin-type calcium-binding repeat family protein [Escherichia
coli STEC_7v]
Length = 6924
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + S
Sbjct: 6700 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSVTTAQATG 6753
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 6754 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 6813
Query: 319 YRFENAII 326
+ ++
Sbjct: 6814 GGNGSDVV 6821
>gi|224612960|emb|CAQ77251.1| HlyA protein [Escherichia coli]
gi|323943998|gb|EGB40082.1| RTX domain-containing protein [Escherichia coli H120]
Length = 1024
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 45/152 (29%), Gaps = 7/152 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGH 859
Query: 371 LIQVIGQDVFESMK----HFYEFGL-SEGRDI 397
I + + F + EG D+
Sbjct: 860 HIIDDDGGKEDKLSLADIDFRDVAFKREGNDL 891
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G +++ + GND G G DT +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQL----YGGDG 781
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
++L+ + D+ N +++L + L G D+ +
Sbjct: 782 NDKLIGGAGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 27/158 (17%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDDL++ G + Y D ++ S G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDLIEG-NDGNDRLYGDKGNDTLS---GGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGN---------DVFDGSSGLDTFFYYAPS 313
+GN+ + G + NV GN D+ DG G D +
Sbjct: 789 AGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+Y+ I+ D + K+D LS + + F D
Sbjct: 849 DIYRYLSGYGHHIIDD-DGGKEDKLSLAD-IDFRDVAF 884
>gi|254409377|ref|ZP_05023158.1| Bacterial pre-peptidase C-terminal domain family [Microcoleus
chthonoplastes PCC 7420]
gi|196183374|gb|EDX78357.1| Bacterial pre-peptidase C-terminal domain family [Microcoleus
chthonoplastes PCC 7420]
Length = 539
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 49/132 (37%), Gaps = 1/132 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + ++ + + G +GND + G++ +++ ++G+D+ +G G D F
Sbjct: 147 LEGDDGDDFLSGGDEADILNGGNGNDRMFGDAGDDLLNGNAGDDIINGGDGNDQAFGGLG 206
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + + + D N+ D + L L + L+
Sbjct: 207 NDRFFLGAGNDQVFGEDGNDLADGEAGD-DLLDGGAGADILFGSLGNDSLVGGDDDDFLV 265
Query: 373 QVIGQDVFESMK 384
+G D
Sbjct: 266 AGVGNDSLSGDA 277
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 11/171 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ GDDLL+ + N D N +++ G N + V G
Sbjct: 166 NGGNGNDRMFGDAGDDLLNGNAGDDIINGGDGNDQAF----GGLGNDRFFLGAGNDQVFG 221
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND+ G + +++ +G D+ GS G D+ +++ + +
Sbjct: 222 EDGNDLADGEAGDDLLDGGAGADILFGSLGNDSLVGGDDDDFLVAGVGNDSL----SGDA 277
Query: 334 KQDFLSDVERL--RFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D L V+ F Q + + +D + +G+ +
Sbjct: 278 GNDTLIGVDPFVPTFGFGQGEIDTLSGGEGVDTFVLGQDDQVFYVGEGNND 328
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 17/150 (11%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVV 280
++ G+DL D G L+ + + I G N ++ + +V GND +
Sbjct: 219 VFGEDGNDLAD-----GEAGDDLLDGGAGADILFGSLGNDSLVGGDDDDFLVAGVGNDSL 273
Query: 281 IGNSANNVFFE----------SSGN-DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G++ N+ G D G G+DTF ++ + N +
Sbjct: 274 SGDAGNDTLIGVDPFVPTFGFGQGEIDTLSGGEGVDTFVLGQDDQVFYVGEGNNDYALIT 333
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+D + E + + + Q
Sbjct: 334 DFIFGEDIIQFAENPTGSVSVSEEGDAGQT 363
>gi|297687615|ref|XP_002821303.1| PREDICTED: matrix metalloproteinase-21-like [Pongo abelii]
Length = 569
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 45 TELNPN-AQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY- 98
++L+ + + A WS+V L F E + + DIK ++ PR
Sbjct: 187 SQLSAAEQRRIVALAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSG 246
Query: 99 --------FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + + G L A+HEIGH LGL P +Y G
Sbjct: 247 QEFAHAWRLGDIHFDDDEHFTPPTSDMGISLLKVAVHEIGHVLGL--PHTYRTG------ 298
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + +F SD A+QK+YG+
Sbjct: 299 -----------SIM---QPNYIPQEPAFE----LDWSDRKAIQKLYGS 328
>gi|270010059|gb|EFA06507.1| hypothetical protein TcasGA2_TC009406 [Tribolium castaneum]
Length = 505
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 41/168 (24%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE-----------TSIHSDIKFIS 83
L + + +E+A+ A +W V +L FE S+ DI
Sbjct: 215 WNKTNLKWYFSLATNEMKELAQKAFDQWESVSNLKFEYWHSQPSAVGEYNSVKPDILISF 274
Query: 84 SN-----------NGYVCTPRYDS-------RYFME------INFDKADVWRYGIGKGTI 119
SN +C+ +D +F I+FDK++ W +G T
Sbjct: 275 SNTLFQHNHNSRCQKGICSSSFDGKGNVLAHGFFPNNDECLGIHFDKSENWYFGESSNTP 334
Query: 120 LSHN-----ALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTS 161
LHEIGH LG+ H + N Y Y D+ Y +L +
Sbjct: 335 DDQTNFYTVLLHEIGHTLGIEHSANNNSIMYAYYKGDSGYPLRPWLLT 382
>gi|313231998|emb|CBY09110.1| unnamed protein product [Oikopleura dioica]
Length = 497
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 63/205 (30%), Gaps = 50/205 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS------ 74
W + + + + + R ALG W+ LTFEE
Sbjct: 121 NKWDTHKLTFHVQNKPYSLSDLQV-------KRAFRKALGIWATASGLTFEERKRKKKRY 173
Query: 75 --IHSDIKFISSNNGYVCTPRYDSRYFM------------EINFDKADVWRYGIGKG-TI 119
+ D+ + C + +FD ++ W KG
Sbjct: 174 KRSNVDLNIGFRERNHECGRSRAFDGPGGELAHAFFPTAGQAHFDMSEKWSTRERKGFNN 233
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS--YFMPQDSMMDASF 177
L A HE+GH LGL H S S+M+ Y P+ S
Sbjct: 234 LVAVATHEVGHMLGLGHS-------------------SIDGSIMNAWYNDPKLSKAPRFR 274
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSL 202
+ DI A+Q +YGAPK
Sbjct: 275 NFIK-LNWDDIQAIQDLYGAPKSGR 298
>gi|254469875|ref|ZP_05083280.1| hemolysin-type calcium-binding protein [Pseudovibrio sp. JE062]
gi|211961710|gb|EEA96905.1| hemolysin-type calcium-binding protein [Pseudovibrio sp. JE062]
Length = 906
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 50/178 (28%), Gaps = 9/178 (5%)
Query: 206 IYKIEVQQKDSPFI-----QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
I+ + F T Y G+D L+ T D + E I G +
Sbjct: 77 IFDFTYNNDTADFYGLSYGVTAYMGDGNDDLNGTGHADTFYGQDGHDE----IYGRGGDD 132
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I I+++ G G D + G + + G D +G G D + +
Sbjct: 133 HIDGGAGIDTIWGGDGADQIDGGDDADTIYGGDGADRIEGGKGNDIIWGGSSGNTVASAN 192
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D + D + + ++ + L G D
Sbjct: 193 EMHGGAGDDIIHGATYVATTPNVDIAVDHIDIAYGGEGDDVIYGYDGNDILDGGTGAD 250
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 7/141 (4%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ IY + + I+ + + D+ + + N+
Sbjct: 159 DTIYGGDGADRIEGGKGNDIIWGGSSGNTVASANEMHGGAGDDIIHGA--TYVATTPNVD 216
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR- 320
IA I+ G G+DV+ G N++ +G D G +G D + +
Sbjct: 217 IAVD-HIDIAYGGEGDDVIYGYDGNDILDGGTGADTIYGGTGNDILSSGSLKDQAVSDQL 275
Query: 321 -FENAIIVYDANEHKQDFLSD 340
++ + D+ SD
Sbjct: 276 WGGAGADMFIIGDGSTDYTSD 296
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+V+GS G+D++ G+ N+ + GND G+ G DT + +
Sbjct: 627 IENVIGSHGHDIITGDDEGNILSGAGGNDRITGAGGNDTLVGGIGVDAFIFTADSGQDTI 686
Query: 328 YD 329
D
Sbjct: 687 TD 688
>gi|193076527|gb|ABO11182.2| iron-regulated protein [Acinetobacter baumannii ATCC 17978]
Length = 979
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ +D + G N+ GND +G +G DT + + + +E I ++ +
Sbjct: 657 IIGTKLDDTLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGNAVMTGGDYEKDIYIFQS 716
Query: 331 NEHKQDFLSD-----VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
H QD ++D F D + N L + +I+ G D S K+
Sbjct: 717 G-HGQDIINDKSYDWTNLQYFNDVKFEGANFTDAQFLR--VGNDLVIKAFGTDDSVSFKN 773
Query: 386 FYEFGLSEGRDITF 399
+ S RD F
Sbjct: 774 YLNDNDSYSRDFNF 787
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N ++++GS G+D + G + ++ +GND+ +G G D A
Sbjct: 806 LNGTDGNDVQNGWKGKDNLLGSLGDDTLNGLAGDDWLEGGAGNDILNGGEGNDLLEGGAG 865
Query: 313 SYLYKIYRFENAIIVYDANEHKQD 336
+ + I D
Sbjct: 866 NDTLTGGIGADTAIFKILAGFGND 889
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 27/69 (39%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND++ G N++ +GND G G DT + + N + +
Sbjct: 844 GGAGNDILNGGEGNDLLEGGAGNDTLTGGIGADTAIFKILAGFGNDATGGNGVDTWSDFN 903
Query: 333 HKQDFLSDV 341
Q ++
Sbjct: 904 ISQGDKINI 912
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 42/185 (22%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS------------GNDVFD 299
++ G + N T+ + + G +G D +IG S N V G D+ +
Sbjct: 665 TLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGNAVMTGGDYEKDIYIFQSGHGQDIIN 724
Query: 300 GSSG--------LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----------DFLSDV 341
S D F A + R N +++ D S
Sbjct: 725 DKSYDWTNLQYFNDVKFEGANFTDAQFLRVGNDLVIKAFGTDDSVSFKNYLNDNDSYSRD 784
Query: 342 ERLRFADQCIDSVNV----------KQRSILEYTASYEDLIQVIGQDVFESMK--HFYEF 389
FAD+ + + +V + ++L+ +G D + + E
Sbjct: 785 FNFIFADKTLTTADVMNIVIPLNGTDGNDVQNGWKGKDNLLGSLGDDTLNGLAGDDWLEG 844
Query: 390 GLSEG 394
G
Sbjct: 845 GAGND 849
>gi|91069926|gb|ABE10854.1| RTX toxin [uncultured Prochlorococcus marinus clone ASNC2259]
Length = 251
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
KN + +++ G +GND + G N+ GND+ G G D ++K
Sbjct: 128 KNDVLNGKKGNDNLWGYAGNDKISGGFGNDTLNGGKGNDLLVGGKGNDELIGGKGKDIFK 187
Query: 318 IYRFENAIIVYDANEHKQDFLSD 340
+ + + ++ D + +
Sbjct: 188 LSKGKGYDLIQDFKDKQDKIFIG 210
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + + + + G GND + G N++ GND G G D F
Sbjct: 132 LNGKKGNDNLWGYAGNDKISGGFGNDTLNGGKGNDLLVGGKGNDELIGGKGKDIFKLSKG 191
Query: 313 SYLYKIYRFEN 323
I F++
Sbjct: 192 KGYDLIQDFKD 202
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFFY 309
++ GY N I+ +++ G GND+++G N+ G D+ G D
Sbjct: 140 NLWGYAGNDKISGGFGNDTLNGGKGNDLLVGGKGNDELIGGKGKDIFKLSKGKGYD-LIQ 198
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDF 337
KI F ++ +D
Sbjct: 199 DFKDKQDKI--FIGSMTKLKLKNKGKDV 224
>gi|326389127|ref|ZP_08210707.1| hypothetical protein Y88_3503 [Novosphingobium nitrogenifigens DSM
19370]
gi|326206358|gb|EGD57195.1| hypothetical protein Y88_3503 [Novosphingobium nitrogenifigens DSM
19370]
Length = 234
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 15/151 (9%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ T+ +GG+D L +GG ++ G N + T ++++
Sbjct: 31 GNGNGLANTMTGAGGNDTL--YGMGGTD-----------TLYGGIGNDRLYGGTGVDTLY 77
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D++ G +V +GND G G DT + + + + A
Sbjct: 78 GGNGADLLYGGKGADVLSGGNGNDRLFGGFGNDTLDGGSGRNVLYGGAGADKFVFSAAPG 137
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + + R AD ++ K + L
Sbjct: 138 NGN--FNTIADFRHADGDHIVLDSKVFAALT 166
>gi|189345973|ref|YP_001942502.1| metallophosphoesterase [Chlorobium limicola DSM 245]
gi|189340120|gb|ACD89523.1| metallophosphoesterase [Chlorobium limicola DSM 245]
Length = 2701
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE---SVVGSSGNDVVI 281
SGG D + + + I+ S N+ + E + G GND +I
Sbjct: 2507 SGGIDTVKSKVDWQLGTGIENLELLGSDDLDGTGNVLDNELVGNEGDNMLEGLFGNDSLI 2566
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GN +++ GND+ G G D + +++ + + + DF S
Sbjct: 2567 GNGGDDILDGGWGNDLLFGGEGADLLTGGSGRDIFRYTNASESGFTAETMDIISDFTSRQ 2626
Query: 342 ERLRFADQCIDSVNVKQRSI 361
+RL + +S +S
Sbjct: 2627 DRLDLSGMDANSSLSGDQSF 2646
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 16/162 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N ++ + + G +GND + GN ++ GND G G DT++ +
Sbjct: 2425 DFGETTGNDNLSGSRTDDVIYGDAGNDSIAGNDGDDTLIGGVGNDTMQGGRGDDTYYVDS 2484
Query: 312 PSYLYK--IYRFENAIIVYDANEHKQDFL---------SDVERL-RFADQCIDSVNVKQR 359
+ + F + D + + +E L +D
Sbjct: 2485 EGDVVRESSSSFGGFFSFFGNRSGGIDTVKSKVDWQLGTGIENLELLGSDDLDGTGNVLD 2544
Query: 360 SILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITF 399
+ L L + G D + + G G D+ F
Sbjct: 2545 NELVGNEGDNMLEGLFGNDSLIGNGGDDILDGGW--GNDLLF 2584
>gi|94497759|ref|ZP_01304326.1| putative glycosyltransferase [Sphingomonas sp. SKA58]
gi|94422808|gb|EAT07842.1| putative glycosyltransferase [Sphingomonas sp. SKA58]
Length = 1096
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 23/162 (14%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
F+ YL +Y D+R + G D A HY+ G R+P + F Y+ + D+
Sbjct: 18 SPLFNEDWYLRTYPDVR-ILGVDAAA---HYLWLGSLLRRDPSSEFSTSGYLEMNPDVGA 73
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF-----DSYLYLGSYDDLRNVFGSDRGAAARH 509
A + H+ G E R + D + D+ + + H
Sbjct: 74 AGMNP-------LLHYVKNGHRENRRLGPRRRALDPASW--KQGDVPVIADAPSVLLCAH 124
Query: 510 YI---THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ G E D AL + + + PD ++
Sbjct: 125 EVNAHMFG-GERSFIDMLDALGQMRLNIYVAVPKEGNPDYIE 165
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 10/95 (10%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLY 404
A+ + Y +Y D+ + ++ H+ G RD + F + Y
Sbjct: 9 AEHVALIKQSPLFNEDWYLRTYPDVRIL----GVDAAAHYLWLGSLLRRDPSSEFSTSGY 64
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L D+ G+ HY+ +G +E R
Sbjct: 65 LEMNPDV----GAAGMNPLLHYVKNGHRENRRLGP 95
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 19/117 (16%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+ ++ D+ D H+ G R + F+ YL D+
Sbjct: 20 LFNEDWYLRTYPDVRILGVD-------AAAHYLWLGSLLRRDPSSEFSTSGYLEMNPDV- 71
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV 637
G+ HY+ +G +E R LG S + D+ + D V
Sbjct: 72 ---GAAGMNPLLHYVKNGHRENRRLGPRRRALDPA------SWKQGDVPVIADAPSV 119
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 17/109 (15%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
F+ YL +Y D+R + G D AA HY+ G R+P + F Y+ + D+
Sbjct: 18 SPLFNEDWYLRTYPDVR-ILGVD---AAAHYLWLGSLLRRDPSSEFSTSGYLEMNPDVGA 73
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSI-----TFNPDLYLTSYDDLWNV 582
A + H+ G+ E R + +P + +
Sbjct: 74 AGMNP-------LLHYVKNGHRENRRLGPRRRALDPASWKQGDVPVIAD 115
>gi|268589569|ref|ZP_06123790.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Providencia rettgeri DSM 1131]
gi|291315095|gb|EFE55548.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Providencia rettgeri DSM 1131]
Length = 2436
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 47/141 (33%), Gaps = 8/141 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + I +++I +++ GND++I N NV + +G+D G D
Sbjct: 2011 LDTNNGDDLIEDNSMIGNIINSGEGNDIIITNGGGNVLYGGNGDDYVYGGENSDLILSDL 2070
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQC-IDSVNVKQRSILEY 364
+ ++ ++ + + D + F Q + +
Sbjct: 2071 GNDKLDGQGGDDHYLIDGSKGGGNTEILDQVGFNNIHLFNFKTQYEVIDEREDTYHLYTS 2130
Query: 365 TASYEDLIQVIGQDVFESMKH 385
++ + + Q+ + H
Sbjct: 2131 QSNLRTVKVKMPQNNNNQVHH 2151
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 19/174 (10%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
Q ++D G + + T + S G N + T ++ G GNDV
Sbjct: 2237 QKVWDKSG-----FGRVFKAQAV----TGAISIPDGIYGNNVLYASTSDTNLYGGEGNDV 2287
Query: 280 VIGNSANNVFFESSGND--VFDGS-SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
I N +N + ++SG + + +G G ++ + + F D + D
Sbjct: 2288 FISNGSNGLLTDASGKNSFIINGEIVGWNSLYSLGGENTIYLINFN-----KDVIREEPD 2342
Query: 337 FLSDVERLRFADQCIDSVNVKQRS--ILEYTASYEDLIQVIGQDVFESMKHFYE 388
S+ R + + SV + Q I L G + + + H E
Sbjct: 2343 HRSNATRYIYTSEQGRSVKIFQYPNTIAPTVVHVRSLEGQNGHSIQQKLNHLVE 2396
>gi|260902087|ref|ZP_05910482.1| type 1 secretion C-terminal domain protein [Vibrio parahaemolyticus
AQ4037]
gi|308109918|gb|EFO47458.1| type 1 secretion C-terminal domain protein [Vibrio parahaemolyticus
AQ4037]
Length = 1982
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +++ QQ D F+ + D G ++ + + D+ + G
Sbjct: 1754 GSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLTLNDSGTDIAQTERHASVG 1813
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +I I+ ++G +G D + G + +++ GND+ G G D
Sbjct: 1814 DEFANSITGGESIDILLGQAGEDTLSGGAGDDILVGGLGNDILTGGLGSDILTGGEGIDT 1873
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++ + + + +DF D ++L +D
Sbjct: 1874 FTFTQE--SLDMTSSRDVIKDFRLDEDKLDLSD 1904
>gi|260365709|ref|ZP_05778223.1| type 1 secretion C-terminal domain protein [Vibrio parahaemolyticus
K5030]
gi|308111800|gb|EFO49340.1| type 1 secretion C-terminal domain protein [Vibrio parahaemolyticus
K5030]
Length = 1982
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + +++ QQ D F+ + D G ++ + + D+ + G
Sbjct: 1754 GSYSFTQSDDLTLQGDQQADLHFLFKVSDGKGGISENVFTLTLNDSGTDIAQTERHASVG 1813
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +I I+ ++G +G D + G + +++ GND+ G G D
Sbjct: 1814 DEFANSITGGESIDILLGQAGEDTLSGGAGDDILVGGLGNDILTGGLGSDILTGGEGIDT 1873
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ + ++ + + + +DF D ++L +D
Sbjct: 1874 FTFTQE--SLDMTSSRDVIKDFRLDEDKLDLSD 1904
>gi|238897660|ref|YP_002923339.1| putative RTX-family protein-2 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465417|gb|ACQ67191.1| putative RTX-family protein-2 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 772
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 226 GGDDLLDLTLIG--GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GGD L D TL G N D ++ ++ G E + TI + + G +G+D +
Sbjct: 572 GGDFLADNTLDAKEGNDNIFD-DSARLHTLRGGEGDDTIITTKGNKKLFGDAGHDQLFSG 630
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SD 340
++ GND G G DT++ L I + D D
Sbjct: 631 QGDDELNGGQGNDRLSGGKGDDTYWIERDHGLTNIEDSGGNDKIVLTGMALNDLRVVKKD 690
Query: 341 VERLRFA 347
+ F+
Sbjct: 691 EDMYLFS 697
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 42/130 (32%), Gaps = 18/130 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLL----DLTLIGGVKNYIDL----- 245
G + GN + P ++ ++ G G+DL+ DL I+L
Sbjct: 111 GTKHYTGGNQADVFYLFTATVPETRSYFNGGEGEDLIIAERDLKGTPYQGYGINLQKNEV 170
Query: 246 --NTESWSSIGGYEKNMTIAQHTVIESVVGSSGN-DVVIGNSANNVFFESSGNDVFDGSS 302
+ N+ IE + G D ++GN NN+ G D G
Sbjct: 171 RFRINQTENFWPLIGNLK-----EIEHIHGHMNTPDYLVGNEKNNILNGLGGRDEIWGHE 225
Query: 303 GLDTFFYYAP 312
G DT
Sbjct: 226 GNDTLILEQG 235
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ +D++ G+ +NV S GND G G D + + R + D E
Sbjct: 421 TPFDDILNGDRQDNVLISSRGNDKLRGGKGQDIYQIQM-KDSAQTERTVSIDNKDDQAEP 479
Query: 334 KQDFLS---DVERLRF 346
+ D L +E L+
Sbjct: 480 EVDLLMLPFKIEDLQI 495
>gi|186680725|ref|YP_001863921.1| FG-GAP repeat-containing protein [Nostoc punctiforme PCC 73102]
gi|186463177|gb|ACC78978.1| FG-GAP repeat protein [Nostoc punctiforme PCC 73102]
Length = 725
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 7/140 (5%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESV 271
+ F TI D +T+ G + L + I G N I +S+
Sbjct: 549 SGAATFKYTITDGQLTSTAKVTVEVGAR----LFGGKGNDHINGTPGNDYINGGNGRDSL 604
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YD 329
G +G+D ++G + N++ +GND+ DG +G D + ++ I+
Sbjct: 605 NGGNGDDTLLGGNGNDILVGGNGNDILDGGNGNDRLSGGFGKDILTGGNGKDIFILAATQ 664
Query: 330 ANEHKQDFLSDVERLRFADQ 349
+ DF + + +
Sbjct: 665 GGDKITDFTKGTDLIGLSGG 684
>gi|296532462|ref|ZP_06895184.1| probable group 2 glycosyl transferase [Roseomonas cervicalis ATCC
49957]
gi|296267211|gb|EFH13114.1| probable group 2 glycosyl transferase [Roseomonas cervicalis ATCC
49957]
Length = 802
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 12/101 (11%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 453
R FD Y + HY+ G ++G +P F Y+ + D+
Sbjct: 18 RSGLFDPAHYRLQCP----PGALEGQDPVAHYLREGWQQGLDPSQGFATRFYLERNPDVA 73
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
++ A+ H+ G EEGR L + D
Sbjct: 74 SSGANP-------LLHYLQAGREEGRAALPPERERLLAAAD 107
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAA 423
A Y + + + H+ G +G D + F + YL D+ S
Sbjct: 25 AHYRLQCPPGALEGQDPVAHYLREGWQQGLDPSQGFATRFYLERNPDV----ASSGANPL 80
Query: 424 RHYITHGVKEGR 435
HY+ G +EGR
Sbjct: 81 LHYLQAGREEGR 92
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 13/120 (10%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDD 494
F Y D H+ G ++G F + YL D
Sbjct: 19 SGLFDPAHYRLQCPPGALEGQDP-------VAHYLREGWQQGLDPSQGFATRFYLERNPD 71
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ + + HY+ G +EGR + +A+ + + A P A + +
Sbjct: 72 VASSGAN----PLLHYLQAGREEGRAALPPERERLLAAADCIDPPRAPTPAEWAALEATW 127
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 537
R FD Y + G D A HY+ G ++G +P F Y+ + D+
Sbjct: 18 RSGLFDPAHYRLQCPP-GALEGQDPVA---HYLREGWQQGLDPSQGFATRFYLERNPDVA 73
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSI 565
++ A+ H+ G EEGR+
Sbjct: 74 SSGANP-------LLHYLQAGREEGRAA 94
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Query: 535 DLINAFADAPDLVQAGKD---HFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSA 589
D + P G+D H+ G+++G S F YL D+ S +
Sbjct: 23 DPAHYRLQCPPGALEGQDPVAHYLREGWQQGLDPSQGFATRFYLERNPDVA----SSGAN 78
Query: 590 AAQHYITHGMKEGRALGIS 608
HY+ G +EGRA
Sbjct: 79 PLLHYLQAGREEGRAALPP 97
>gi|148545445|ref|YP_001265547.1| hypothetical protein Pput_0188 [Pseudomonas putida F1]
gi|148509503|gb|ABQ76363.1| conserved repeat domain [Pseudomonas putida F1]
Length = 9030
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V YI + + G + N ++ + + G G+D + G N++ +G
Sbjct: 8846 TTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGGSDTLDGGKGNDILLGGTG 8905
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
ND G G D + + + + ++ D N+ + D +
Sbjct: 8906 NDTLIGGQGDDILIGGSGADTFVWKAGDIGNDVIKDFNKAEGDRI 8950
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A+Q Y A K + + T +D G + L GG N I
Sbjct: 8829 ALQ-TYVAQKSGVEVGAVTTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGG 8887
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---ESSGNDVF 298
++ G + N + T ++++G G+D++IG S + F GNDV
Sbjct: 8888 SDTLDGGKGNDILLGGTGNDTLIGGQGDDILIGGSGADTFVWKAGDIGNDVI 8939
>gi|30249346|ref|NP_841416.1| glycosyl transferase family protein [Nitrosomonas europaea ATCC
19718]
gi|30180665|emb|CAD85281.1| Glycosyl transferase, family 2 [Nitrosomonas europaea ATCC 19718]
Length = 1217
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y Y ++R G+D HY HG EG+NP F Y+ H +++
Sbjct: 262 FDAAWYFTQYPEVRES-GAD---PVDHYFYHGAAEGKNPGPFFDTSRYLEQHPEILETDL 317
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ H+ G EG
Sbjct: 318 NP-------LLHYVEIGFYEGLKADP 336
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 479 RFVTF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 536
R ++ D+ Y Y ++R G+D HY HG EG+NP F Y+ H ++
Sbjct: 257 RQCSWFDAAWYFTQYPEVRES-GAD---PVDHYFYHGAAEGKNPGPFFDTSRYLEQHPEI 312
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNP-DLYLTSYDDLWNVFGSDRSAA 590
+ + H+ G+ EG + +P + +L +D G + A
Sbjct: 313 LETDLNP-------LLHYVEIGFYEG--LKADPCNRWLRLFDKQITDLGKTGNTA 358
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 16/148 (10%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F A Y + ++ + AD DH+ G EG++ F+ YL +
Sbjct: 257 RQCSWFDAAWYFTQYPEVRESGADP-------VDHYFYHGAAEGKNPGPFFDTSRYLEQH 309
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKK 636
++ HY+ G EG L + + ++ D + H+K
Sbjct: 310 PEILE----TDLNPLLHYVEIGFYEG--LKADPCN-RWLRLFDKQITDLGKTGNTAGHEK 362
Query: 637 VDLYTDYFGDGNYYDSDLYSMHDINHDF 664
+ + + Y D YSM DF
Sbjct: 363 YTVVSAVYNVAAYLDDFFYSMTCQTLDF 390
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGA 421
Y Y ++ + + + H++ G +EG++ FD+ YL + ++
Sbjct: 267 YFTQYPEVRE----SGADPVDHYFYHGAAEGKNPGPFFDTSRYLEQHPEILET----DLN 318
Query: 422 AARHYITHGVKEGRNPDA 439
HY+ G EG D
Sbjct: 319 PLLHYVEIGFYEGLKADP 336
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F A Y + ++ + AD DH+ G EG+ FD+ YL +
Sbjct: 257 RQCSWFDAAWYFTQYPEVRESGADP-------VDHYFYHGAAEGKNPGPFFDTSRYLEQH 309
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEG 518
++ +D HY+ G EG
Sbjct: 310 PEILE---TDLNPLL-HYVEIGFYEG 331
>gi|307150972|ref|YP_003886356.1| C-type lectin domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981200|gb|ADN13081.1| C-type lectin domain protein [Cyanothece sp. PCC 7822]
Length = 860
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES---VVGSSGNDVVIG 282
G ++L+D + G + ++ ++ + +E+ V+G++ +D++ G
Sbjct: 439 GQNNLIDASSATGSTSI----NADLANQNLVVDGLSFSSSFKVENFVNVIGTAQDDIISG 494
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE------HKQD 336
+ A+N + G+D F GSSG DT A F AI + A D
Sbjct: 495 DQADNQLSGNEGDDTFVGSSGNDTLDGGAGIDTLDYSSFTEAITLLRAGSINKGSAGGID 554
Query: 337 FLSDVERLRFADQCIDSVNVKQR 359
+S++E + A + ++++
Sbjct: 555 SISNIETIIGAVEQANTIDASNG 577
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 8/139 (5%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTV-IESVVGSSGNDVVIGNSAN 286
+ +D + ++D+N + S + G ++ +V G++ D +IGN A
Sbjct: 570 NTIDASNGISPTTFLDVNLATNSLIVNGLPTLGALSFTVQNFVNVTGTTQTDSIIGNEAA 629
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE------HKQDFLSD 340
N+ + G+D F GSSG DT A F AI + A D +S+
Sbjct: 630 NLIDGNEGDDTFVGSSGNDTLEGGAGIDTLDYSSFTEAITLLRAGSINKGSAGGIDSISN 689
Query: 341 VERLRFADQCIDSVNVKQR 359
+E + A ++++
Sbjct: 690 IETIIGAVGQANTIDASNG 708
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 57/146 (39%), Gaps = 12/146 (8%)
Query: 219 IQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQHTVIESVVGS 274
I+TI + G + +D + ++D+N + S + +++ + ++ G+
Sbjct: 690 IETIIGAVGQANTIDASNGISPTTFLDVNLAANSLIVNGLPTLGSLSFTVQNFV-NITGT 748
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ D + GN+ N +SG D+ G G D + ++ + N+
Sbjct: 749 TQADSLTGNNLVNQIIGNSGEDLLFGGEGDDFLQGGLDNDIFVLRSGNG-------NDTI 801
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRS 360
QDF ++ A + + + S
Sbjct: 802 QDFQVGFDKFGLAGLAFEDLTLTDTS 827
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 12/87 (13%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV----------IGNSANNVFFESSGND 296
++ GG E + I + N+++ + N+ ++ GND
Sbjct: 172 PGEPNNFGGNENYVGINYGNT--GAWNDTFNEIISRGIIEISSSVINAGDDTLNGLGGND 229
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ +G +G D + A Y K Y N
Sbjct: 230 LINGGAGNDELYGEAAFYQGKYYLLSN 256
Score = 38.6 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G++ ND + +++ + G+D+ +G D + A Y K Y N
Sbjct: 50 DIIQGTASNDAIQSLEGDDIVYGLGGDDLINGGDENDNIYGEAVFYQDKYYLLSN 104
>gi|157821123|ref|NP_001099778.1| matrix metalloproteinase-21 [Rattus norvegicus]
gi|149061331|gb|EDM11754.1| matrix metalloproteinase 21 (predicted) [Rattus norvegicus]
Length = 568
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 71/194 (36%), Gaps = 47/194 (24%)
Query: 25 NYFIRYKPDVLTTHRLSFDI------TELN-PNAQEVARWALGEWSKVVDLTFEE--TSI 75
V + L++ + ++L+ + + R A WS+V L F E T+
Sbjct: 160 GRSDTGASRVFSKKTLTWRLVGDAYSSQLSGDEQRYIFRLAFRMWSEVTPLDFREDLTAP 219
Query: 76 HS--DIKFISSNNGYVCTPRYDSRY---------FMEINFDKADVWRY-GIGKGTILSHN 123
+ DIK ++ PR EI+FD + + G L
Sbjct: 220 GTMVDIKLGFGRGRHLGCPRVFDGSGQEFAHAWHLGEIHFDDDEHFTPLSSDTGISLLKV 279
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A+HEIGH LGL P +Y G S+M P + +F
Sbjct: 280 AVHEIGHVLGL--PHTYRVG-----------------SIM---QPNYIPQEPAFE----L 313
Query: 184 MVSDIVAVQKIYGA 197
SD A+Q++YG+
Sbjct: 314 DWSDRKAIQRLYGS 327
>gi|332208034|ref|XP_003253101.1| PREDICTED: LOW QUALITY PROTEIN: stromelysin-2-like [Nomascus
leucogenys]
Length = 474
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 52/188 (27%), Gaps = 46/188 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNYTPDLPR-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
H D + G ++ +I+FD D GT L A HE G
Sbjct: 161 SFAVKEHGDF-YSFDGPGQSLXYPPGPGFYGDIHFDD-DEKSTEDASGTNLFLVAAHEFG 218
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H+LGL H + +Y + + + + D+
Sbjct: 219 HSLGLFHSANTEA--LMYPLYHSFTELARFR----------------------LSQDDVN 254
Query: 190 AVQKIYGA 197
+Q +YG
Sbjct: 255 GIQSLYGP 262
>gi|307155173|ref|YP_003890557.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306985401|gb|ADN17282.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 966
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 10/190 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLI-------GGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G+D + + ID S + G I T
Sbjct: 682 GGTGNDTLIGGAGNDTYIVDNTADVVIETSTLSTEIDTVQSSVTYSLGNNLEKLILSGTS 741
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ G++ N+ + GNSANN+ S+G D G G D + + I
Sbjct: 742 AINGTGNALNNTITGNSANNILDGSTGADTLIGGGGNDLYIVDNTGDIVTETSTLAGEID 801
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQD--VFESMK 384
+ ++VE L + + +I+ ++ L G D +
Sbjct: 802 TVQSSITYTLKANVENLTLTGTSLINGTGNALNNIITGNSNNNTLTGNAGSDILIGGGGN 861
Query: 385 HFYEFGLSEG 394
GL++G
Sbjct: 862 DTLNLGLNDG 871
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-------TLIGGVKNYIDLNTESW 250
GN+ S T+ GG+DL + T + ID S
Sbjct: 751 NNTITGNS---ANNILDGSTGADTLIGGGGNDLYIVDNTGDIVTETSTLAGEIDTVQSSI 807
Query: 251 S-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ ++ +N+T+ ++I + G++ N+++ GNS NN ++G+D+ G G DT
Sbjct: 808 TYTLKANVENLTLTGTSLI-NGTGNALNNIITGNSNNNTLTGNAGSDILIGGGGNDTLNL 866
Query: 310 YAPSYLYKIYRF--ENAIIVYDANEHKQDFLSDV 341
+ I R+ + + V + D L+ +
Sbjct: 867 GLNDGVADIVRYTLGDGVDVINQFVKGSDKLAFI 900
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+P TI ++ G + + I + S+I + I T
Sbjct: 206 NLSNPTNATIKNNSGTVTISDSNIIVNNTL----ESTSSTILPANIDNLILLGTSNIDGT 261
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G++ N+ + GN +N +G+D+ G G DT +
Sbjct: 262 GNANNNTLTGNGVDNTLSGEAGDDLLYGLGGNDTLMGGDGND 303
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 33/85 (38%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + G + ++ G+D+ DG +G+D+ + +Y + + + ++ D
Sbjct: 576 NDDLYGGNGDDNLEGGIGDDLLDGGTGIDSLSGGTGNDIYIVDNSGDVVTETSTITNEID 635
Query: 337 FLSDVERLRFADQCIDSVNVKQRSI 361
+ D D + +I
Sbjct: 636 TVKSSINYSLGDNLEDLILTGTSAI 660
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 12/137 (8%)
Query: 210 EVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYID-LNTESWSSIGGYEKNMTIAQHT 266
K++ TI DS ++ L+ T + ID L S+I G
Sbjct: 212 NATIKNNSGTVTISDSNIIVNNTLESTSSTILPANIDNLILLGTSNIDGT--------GN 263
Query: 267 VIESVVGSSGND-VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + +G D + G + +++ + GND G G D S
Sbjct: 264 ANNNTLTGNGVDNTLSGEAGDDLLYGLGGNDTLMGGDGNDHLIGDGDSANNPQPDPNILT 323
Query: 326 IVYDANEHKQDFLSDVE 342
+ D L+ +
Sbjct: 324 PNVNVFTGFNDTLTAFD 340
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 36/120 (30%), Gaps = 10/120 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D + G +++ +G D G +G D + + I
Sbjct: 577 DDLYGGNGDDNLEGGIGDDLLDGGTGIDSLSGGTGNDIYIVDNSGDVVTETSTITNEIDT 636
Query: 329 DANEHKQDFLSDVERLRFADQCID----------SVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++E L +IL+ + LI G D
Sbjct: 637 VKSSINYSLGDNLEDLILTGTSAINGTGNNLNNTLTGNTAANILDGGTGNDTLIGGAGND 696
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 19/194 (9%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+++Y I GG + L+ G YI N+ + N
Sbjct: 577 DDLYGGNGDDNLEGGIGDDLLDGGTGIDSLSGGTGNDIYIVDNSGDVVTETSTITNEIDT 636
Query: 264 QHTVIESVVGSSGNDVVIGNS------------------ANNVFFESSGNDVFDGSSGLD 305
+ I +G + D+++ + A N+ +GND G +G D
Sbjct: 637 VKSSINYSLGDNLEDLILTGTSAINGTGNNLNNTLTGNTAANILDGGTGNDTLIGGAGND 696
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEY 364
T+ + + + I + +++E+L + + + +
Sbjct: 697 TYIVDNTADVVIETSTLSTEIDTVQSSVTYSLGNNLEKLILSGTSAINGTGNALNNTITG 756
Query: 365 TASYEDLIQVIGQD 378
++ L G D
Sbjct: 757 NSANNILDGSTGAD 770
>gi|148668674|gb|EDL00990.1| matrix metallopeptidase 1a (interstitial collagenase) [Mus
musculus]
Length = 421
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 55/174 (31%), Gaps = 51/174 (29%)
Query: 53 EVARWALGEWSKVVDLTFEET-SIHSDIKFIS-----SNNGYVCTPRY--------DSRY 98
+AR A WS V LTF+ DI +N P Y
Sbjct: 87 AIAR-AFRVWSDVTPLTFQRVFEEEGDIVLSFHRGDHGDNNPFDGPNYKLAHTFQPGPGL 145
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
++++D + W + A HE+GH+LGL H
Sbjct: 146 GGDVHYDLDETWTNSSENFNLFYVTA-HELGHSLGLTHSSDIGA---------------- 188
Query: 159 LTSVM--SY-FMPQDSMMDASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNI 206
+M SY + +D +++ DI +Q +YG P G
Sbjct: 189 ---LMFPSYTWYTEDFVLNQ----------DDINRIQDLYGPSPNPIQPTGATT 229
>gi|325267648|ref|ZP_08134300.1| hypothetical protein HMPREF9098_2028 [Kingella denitrificans ATCC
33394]
gi|324980998|gb|EGC16658.1| hypothetical protein HMPREF9098_2028 [Kingella denitrificans ATCC
33394]
Length = 1531
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + T+ + + G +G+D + G ++ + G+D G G D A
Sbjct: 1329 VHGSDGDDTLIGGAGNDVLYGQAGHDELYGEDGDDRLYGGEGDDKLAGGRGSDYLAGGAG 1388
Query: 313 SYLYKIYRFENA--IIVYDANEHKQDFLSDVERLRFADQCI 351
S Y R ++ D + D L + D
Sbjct: 1389 SDRYVFERNFGKDFVMNLDTSPDSTDTLRITDGYTPDDFTF 1429
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND + G N+ + GND G +G +T Y I E A E K
Sbjct: 1081 AGNDYLDGGEGNDTLYGGLGNDTLTGGTGSNTLDGGEGFDTYVITGEEFAQTTATPAEKK 1140
Query: 335 Q 335
Sbjct: 1141 S 1141
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 30/153 (19%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDLNTESWSSI 253
A G + +Y S I G+D+L+ + G K +L+ ++ I
Sbjct: 810 AEMGDGNDRVYG-------SMSADMIDGGDGNDILNGSSFVPAGTDKPQAELDKDADIII 862
Query: 254 GGYEKNMTI--AQHTVI------------------ESVVGSSGNDVVIGNSANNVFFESS 293
GG ++ I A I + +G G+D + G+ +
Sbjct: 863 GGNGHDLIIGMAGDDTIYTGKKDEHKETKPTGMRGDWALGHLGDDTIYGSRGQDFLQGGE 922
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G+D+ G + D + E +I
Sbjct: 923 GSDIIHGGADDDVILGDSFIRFSSRTVLEKGVI 955
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 8/146 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + I+ + G D + G + G+D +G GLDT+
Sbjct: 609 NLTDLSNHYVRFGSDTIDELKGGDLEDYLFGGGNIDTLDGGEGDDYMEGGQGLDTYII-- 666
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ + + N K + E + I +Q + + Y +DL
Sbjct: 667 -KDHDTVFDSDMQGKILFDNGGKPIQIDRFESDGEQNPVIWHSPDRQFTAVRYG---KDL 722
Query: 372 IQVIGQDVFES--MKHFYEFGLSEGR 395
I D + +K F++ G+
Sbjct: 723 IVSTKSDKSDKVTVKDFFKIAKDNGK 748
Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 43/186 (23%)
Query: 200 GSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GSL + ++ + +Y S D++D GG N I LN S+ G +
Sbjct: 795 GSLSDTVFATSSGIWAEMGDGNDRVYGSMSADMID----GGDGNDI-LNGSSFVPAGTDK 849
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---------------------ESSGND 296
+ + I ++G +G+D++IG + ++ + G+D
Sbjct: 850 PQAELDKDADI--IIGGNGHDLIIGMAGDDTIYTGKKDEHKETKPTGMRGDWALGHLGDD 907
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
GS G D E + I++ + D + +RF+ + + V
Sbjct: 908 TIYGSRGQDFLQGG-----------EGSDIIHGGADD--DVILGDSFIRFSSRTVLEKGV 954
Query: 357 KQRSIL 362
+I+
Sbjct: 955 IPDAIV 960
>gi|171058980|ref|YP_001791329.1| heme peroxidase [Leptothrix cholodnii SP-6]
gi|170776425|gb|ACB34564.1| Animal haem peroxidase [Leptothrix cholodnii SP-6]
Length = 1650
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 56/164 (34%), Gaps = 25/164 (15%)
Query: 199 KGSLGNN----IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++G+ + + Q +++ + G + T T S++
Sbjct: 1301 TNTIGDTNGLGTFSFQWQTSPDGTPGSVWTNVGTNTAAFTPAQAQVGQFLRVTVSFTDGQ 1360
Query: 255 GYEKNMTIAQHTVIESVVGSSGN-------------------DVVIGNSANNVFFESSGN 295
G +++T A +VI + G + D + G + N+ +GN
Sbjct: 1361 GNLESLTSAPTSVIGDLFGGTAAADVFNGTAGADNAAGAGAADTLNGQAGNDTLNGGAGN 1420
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
D +G +G D+ + + + + +V + N D +
Sbjct: 1421 DTLNGGTGADSMTGGGGNDTFLVDDAGD--VVVEGNGGGTDTVQ 1462
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 53/223 (23%), Gaps = 29/223 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYD---------SGGDDLL-------DLTLIGGV 239
GA +L + + D GG D + TL
Sbjct: 1417 GAGNDTLNGGTGADSMTGGGGNDTFLVDDAGDVVVEGNGGGTDTVQVQSLLNAFTLAANF 1476
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHT--------VIESVVGSSGNDVVIGNSANNVFFE 291
+N + + +++ G N + + G GNDV++G + +
Sbjct: 1477 ENLLVVGATNFAGTGNGVGNTLTGGTGGDTLSGLGGADVLNGGDGNDVLLGGAGADDLTG 1536
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYK-----IYRFENAIIVYDANEHKQDFLSDVERLRF 346
G D G +G D F Y I F + F
Sbjct: 1537 GVGADTMTGGAGADNFIYTNVDQSTAALRDLIIDFGATDDIDLGAIDANAGTVANNAFSF 1596
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
N + + + + D +
Sbjct: 1597 IGTAAFGANATGQLRYSFVGANTLVEASNDADAVAEFSLLLQG 1639
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 8/131 (6%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + + +G+D + G++ N+ +GND F G D K
Sbjct: 869 ILMGGTDGADRLRAGAGDDTLHGDAGNDRLEGGAGNDFFFAGEGDDILTDSFGDDNMK-G 927
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ N +I +N D L + F ++ + + V G
Sbjct: 928 QGGNDVI---SNSGGFDLLFGGDGKDFILGGQGDAESFGGHGDDFIHAGTGINTVFGDSG 984
Query: 380 FESMKHFYEFG 390
+ E G
Sbjct: 985 N----DWIEGG 991
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 9/189 (4%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWS 251
G++ + + + GDD+L + G N + N+ +
Sbjct: 882 AGAGDDTLHGDAGNDRLEGGAGNDFFFAGEGDDILTDSFGDDNMKGQGGNDVISNSGGFD 941
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + I G G+D + + N F SGND +G G D
Sbjct: 942 LLFGGDGKDFILGGQGDAESFGGHGDDFIHAGTGINTVFGDSGNDWIEGGDGADLLQGDN 1001
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + +++ D N+ D S + + + + + Y S E +
Sbjct: 1002 GDPFQQSTIIGHDVLLGDGNDD-YDSESGDDIMFGTPGTNRAEGMLGFDWVTYARSTELV 1060
Query: 372 IQVIGQDVF 380
+ +
Sbjct: 1061 DADLNRTAL 1069
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 12/146 (8%)
Query: 237 GGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG L + + G N + + G+D++ + ++ GN
Sbjct: 872 GGTDGADRLRAGAGDDTLHGDAGNDRLEGGAGNDFFFAGEGDDILTDSFGDDNMKGQGGN 931
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
DV S G D F + H DF+ A I++V
Sbjct: 932 DVISNSGGFDLLFGGDGKD----FILGGQGDAESFGGHGDDFI-------HAGTGINTVF 980
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFE 381
+ DL+Q D F+
Sbjct: 981 GDSGNDWIEGGDGADLLQGDNGDPFQ 1006
Score = 37.0 bits (84), Expect = 9.4, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 56/184 (30%), Gaps = 48/184 (26%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYE 257
G++I + GG+D++ + GG L + + G
Sbjct: 912 GDDILTDSFGDDNMKG------QGGNDVISNSGGFDLLFGGDGKDFILGGQGDAESFGGH 965
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSA-------------------------------- 285
+ I T I +V G SGND + G
Sbjct: 966 GDDFIHAGTGINTVFGDSGNDWIEGGDGADLLQGDNGDPFQQSTIIGHDVLLGDGNDDYD 1025
Query: 286 ----NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+++ F + G + +G G D Y + L A++ D ++ D +V
Sbjct: 1026 SESGDDIMFGTPGTNRAEGMLGFDWVTYARSTELVDADLNRTALLPPD-LDNINDRFDNV 1084
Query: 342 ERLR 345
E L
Sbjct: 1085 EGLS 1088
>gi|300981333|ref|ZP_07175469.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 45-1]
gi|301050621|ref|ZP_07197489.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 185-1]
gi|300297687|gb|EFJ54072.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 185-1]
gi|300408993|gb|EFJ92531.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 45-1]
Length = 1024
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G ++ + GND G G DT +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQL----YGGDG 781
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
++L+ + D+ N +++L + L G D+ +
Sbjct: 782 NDKLIGGAGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD ++ G N + ++ G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDHIE----GNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GN+ + G + NV GND GS G D + L K
Sbjct: 789 AGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 323 N 323
+
Sbjct: 849 D 849
>gi|126727078|ref|ZP_01742916.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2150]
gi|126703750|gb|EBA02845.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2150]
Length = 761
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 9/140 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTE------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G ++ T + ID+ S+S +M +E+ +GND +
Sbjct: 348 GTVTVNTTDMQVYS--IDITPGFDMESISFSVANSGTSHMIYLDGLSMEAGAADAGNDTI 405
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G ++ G+D G G D F Y A + I F ++ QD
Sbjct: 406 DGGLGDDTIDGGEGDDTLTGGQGDDVFIYAAGTGADVITDFGTGQS-GSIDDGIQDNNDF 464
Query: 341 VERLRFADQCIDSVNVKQRS 360
V+ F + + +
Sbjct: 465 VDLSGFYNTTTLANVNNADA 484
Score = 37.8 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 10/88 (11%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE----- 291
+ ID N + N A + + + G +GND + + N+V
Sbjct: 130 TSNDDIIDANYADDPDGDMVDANDA-ADGSNDDVIEGYAGNDSISAGARNDVIDGGTDDD 188
Query: 292 ----SSGNDVFDGSSGLDTFFYYAPSYL 315
+G+D G G D APS +
Sbjct: 189 TIDGGAGDDSILGGDGNDVLLGDAPSSV 216
>gi|24375799|ref|NP_719842.1| RTX toxin, putative [Shewanella oneidensis MR-1]
gi|24350748|gb|AAN57286.1|AE015864_1 RTX toxin, putative [Shewanella oneidensis MR-1]
Length = 2768
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 13/148 (8%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T+ + V G SG+D++IG + GND G G D + +
Sbjct: 2585 GSGDDTVNGGQGSQLVYGGSGDDLLIGGEGIDGLRGGDGNDTLIGGLGDDVLRGDSGADT 2644
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ ++R+ +A +H DF ++L +D S L+++ + + I
Sbjct: 2645 F-VWRYADAD---KGTDHIMDFKVGEDKLDLSDLLQGETANTLESYLKFSLNNGSTVIDI 2700
Query: 376 GQDVF---------ESMKHFYEFGLSEG 394
+ + + + ++G +
Sbjct: 2701 DANKDGTFDQHIVLDGVNLYSQYGATNN 2728
>gi|123187|sp|P09983|HLYAC_ECOLX RecName: Full=Hemolysin, chromosomal
gi|146379|gb|AAA23975.1| chromosomal hemolysin A (hlyA) [Escherichia coli]
Length = 1023
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 739 FHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDG 798
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 799 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 856
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G ++ + GND G G DT +
Sbjct: 725 TRADKFFGSKFADIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQL----YGGDG 780
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
++L+ + D+ N +++L + L G D+ +
Sbjct: 781 NDKLIGGAGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 837
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 838 NDLLKGGYGN------DIYRYLSGY 856
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 16/121 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD ++ G + Y D ++ S G + + + ++G
Sbjct: 732 GSKFADIFHGADGDDHIEG-NDGNDRLYGDKGNDTLS---GGNGDDQLYGGDGNDKLIGG 787
Query: 275 SGNDVVIGNSAN------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GN+ + G + NV GND GS G D + L K
Sbjct: 788 AGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 847
Query: 323 N 323
+
Sbjct: 848 D 848
>gi|147904008|ref|NP_001079285.1| matrix metalloproteinase-21 precursor [Xenopus laevis]
gi|50400815|sp|O93470|MMP21_XENLA RecName: Full=Matrix metalloproteinase-21; Short=MMP-21;
Short=xMMP; Flags: Precursor
gi|3211705|gb|AAC21447.1| matrix metalloproteinase [Xenopus laevis]
Length = 604
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 52/226 (23%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYK-PDVLTTHRLSFDITELNPNAQEVARWAL 59
M++ K Y E+ A + ++ ++++ +++LS + + V R A
Sbjct: 186 MYSNK--YREEQEALQKSTGKVFTKKLLKWRMIGEGYSNQLSIN------EQRYVFRLAF 237
Query: 60 GEWSKVVDLTFEETSIH----SDIKFISS-------NNGYVCTPR-YDSRYF-MEINFDK 106
WS+V+ L FEE + DIK + + + + + +F +I+FD
Sbjct: 238 RMWSEVMPLDFEEDNTSPLSQIDIKLGFGRGRHLGCSRAFDGSGQEFAHAWFLGDIHFDD 297
Query: 107 ADVWR-YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
+ + G L A HEIGH LGL H + S+M
Sbjct: 298 DEHFTAPSSEHGISLLKVAAHEIGHVLGLSHIH-------------------RVGSIM-- 336
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNIYK 208
P D+ F +SD A+Q +YG+ P + + IYK
Sbjct: 337 -QPNYIPQDSGFE----LDLSDRRAIQNLYGSCEGPFDTAFDWIYK 377
>gi|221639946|ref|YP_002526208.1| glycoside hydrolase, family 16 [Rhodobacter sphaeroides KD131]
gi|221160727|gb|ACM01707.1| Glycoside hydrolase, family 16 [Rhodobacter sphaeroides KD131]
Length = 475
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 13/139 (9%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + ++ +G + L + GG + G + + +
Sbjct: 309 TGTAAINGAGNGLANVLWGNGAANRL--SGGGGNDR-----------LEGRDGSDVLNGG 355
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T ++++G +G+D + G + ++ SGND DG D A + +
Sbjct: 356 TGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGRD 415
Query: 326 IVYDANEHKQDFLSDVERL 344
++ D ++
Sbjct: 416 VITDFRVGNGGDRLEIHDY 434
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 21/133 (15%)
Query: 271 VVGSSGN---DVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYYAPSYLYKI 318
+ +GN +V+ GN A N GN DV +G +G DT A
Sbjct: 313 AINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRLAG 372
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ N+ + D+ + + + + D+I
Sbjct: 373 GTGSDRLVGGSGNDRLDGGI---------DRDVLTGGAGADTFVFAAGYGRDVITDFRVG 423
Query: 379 VFESMKHFYEFGL 391
+++
Sbjct: 424 NGGDRLEIHDYAA 436
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 3/117 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+SG D++ G N+ + D G +G DT+ ++ +
Sbjct: 233 DDLRGTSGEDLLYGFGGNDTLRGGAAADRMIGGTGNDTYIVDHAGD--EVVERAGEGLDR 290
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMK 384
+ VERL + ++L + L G D E
Sbjct: 291 VCASVSHQLAAHVERLVLTGTAAINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRD 347
>gi|118098430|ref|XP_415092.2| PREDICTED: similar to membrane-type-4 matrix metalloproteinase
[Gallus gallus]
Length = 592
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 17/102 (16%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH-SDIKFISS----NNGYVCTPRYDSRYF------- 99
+ + +AL WS + L F E + + +DI+ S N+GY +
Sbjct: 150 RALMYYALKVWSDITPLNFHEVAGNNADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDH 209
Query: 100 ---MEINFDKADVWRY--GIGKGTILSHNALHEIGHALGLMH 136
+ +FD + W + G L A+HE GHA+GL H
Sbjct: 210 HTAGDTHFDDDEYWTFRSSDAHGMDLFAVAVHEFGHAIGLTH 251
>gi|62897521|dbj|BAD96700.1| matrix metalloproteinase 7 preproprotein variant [Homo sapiens]
Length = 267
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 70/215 (32%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W++ + Y+ T + L AL W
Sbjct: 84 KPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRL-------VSKALNMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F + +DI + + + +D + +FD+ +
Sbjct: 137 GKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFM 167
W G G A HE+GH+LG+ H N YP YG
Sbjct: 197 RWTDGSSLGINFLCAATHELGHSLGMGHSSDPNAVMYPTYGNG----------------D 240
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
PQ+ + DI +QK+YG S
Sbjct: 241 PQNFKLSQ----------DDIKGIQKLYGKRSNSR 265
>gi|332558957|ref|ZP_08413279.1| glycoside hydrolase family protein [Rhodobacter sphaeroides WS8N]
gi|332276669|gb|EGJ21984.1| glycoside hydrolase family protein [Rhodobacter sphaeroides WS8N]
Length = 475
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ G+ L ++ L G N L+ + + G + + + T ++++G +G+D + G
Sbjct: 315 NGAGNGLANVLLGNGAANR--LSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRLAG 372
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ ++ SGND DG D A + + ++ D ++
Sbjct: 373 GTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGRDVITDFRVGNGGDRLEIH 432
Query: 343 RL 344
Sbjct: 433 DY 434
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 2/120 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ G + L + + + G N + + + G +G+D +IG + ++
Sbjct: 311 TAAINGAGNGLANVLLGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRL 370
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D G SG D + A A + +D ++D D+
Sbjct: 371 AGGTGSDRLVGGSGNDRL--DGGIDRDVLTGGAGADTFVFAAGYGRDVITDFRVGNGGDR 428
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T+ + + G+SG D++ G N+ + D G +G DT+
Sbjct: 220 LPSDSTVFGKAGADDLRGTSGEDLLYGFGGNDTLRGGAAADRMIGGTGNDTYIVDHAGD- 278
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQV 374
++ + + VERL + ++L + L
Sbjct: 279 -EVVERAGEGLDRVCASVSHQLAAHVERLVLTGTAAINGAGNGLANVLLGNGAANRLSGG 337
Query: 375 IGQDVFESMK 384
G D E
Sbjct: 338 GGNDRLEGRD 347
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 50/171 (29%), Gaps = 19/171 (11%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF----- 298
++ S S++ G + + + + G GND + G +A + +GND +
Sbjct: 217 NIRLPSDSTVFGKAGADDLRGTSGEDLLYGFGGNDTLRGGAAADRMIGGTGNDTYIVDHA 276
Query: 299 ------DGSSGLDTFFYY----APSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRF 346
GLD +++ ++ A I N L + RL
Sbjct: 277 GDEVVERAGEGLDRVCASVSHQLAAHVERLVLTGTAAINGAGNGLANVLLGNGAANRLSG 336
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGR 395
+L ++ LI G D G R
Sbjct: 337 GGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDR 387
>gi|117918839|ref|YP_868031.1| outer membrane adhesin like protein [Shewanella sp. ANA-3]
gi|117611171|gb|ABK46625.1| putative outer membrane adhesin like proteiin [Shewanella sp. ANA-3]
Length = 5839
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 13/142 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D G + ++GG N I + G T+ ++++G +GND +IG
Sbjct: 5626 FDQSGANDKADIILGGAGNDILFGQGGNDYLDGGAGKDTLYGGNGNDTLIGGAGNDTLIG 5685
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ N+ G+DV G SG DTF + +H DF +
Sbjct: 5686 GAGNDTLIGGLGDDVLRGDSGNDTFVWRYADAD-------------KGTDHIMDFNVSED 5732
Query: 343 RLRFADQCIDSVNVKQRSILEY 364
+L +D S L +
Sbjct: 5733 KLDLSDLLQGETAGTLESYLNF 5754
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 27/159 (16%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
Q S T+Y S G+D + T GG + GY N + I+
Sbjct: 4988 QTDASSGQDTVYGSNGNDHIVSTNGGGDH------------LLGYAGNDVLVGGDAIQ-- 5033
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI---YRFENA---- 324
D + G + N++ G D G G D Y I YR+
Sbjct: 5034 -----GDTINGGTGNDILVAGLGQDSLYGGEGNDIAVLMGNRADYIITKDYRYSQWDNWF 5088
Query: 325 -IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + L D+E ++F D + ++
Sbjct: 5089 NFTTIEHGQTITKALHDIEYIQFDDGIYELDKNTGELVM 5127
>gi|94480751|emb|CAK02715.1| HlyA protein [Escherichia coli]
Length = 1024
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G ++ + GND G G DT +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQL----YGGDG 781
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
++L+ + D+ N +++L + L G D+ +
Sbjct: 782 NDKLIGGAGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 16/121 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD ++ G + Y D ++ S G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDHIEG-NDGNDRLYGDKGNDTLS---GGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GN+ + G + NV GND GS G D + L K
Sbjct: 789 AGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 323 N 323
+
Sbjct: 849 D 849
>gi|330943684|gb|EGH45986.1| calcium binding hemolysin protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 775
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 15/155 (9%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------S 249
+ G+++Y ++ Q T++D L G I T
Sbjct: 126 SHFNQDGDSVYAVDQLQFAD---STVWDGAKLKTEVLKTTGDNDTIIGYQTADQLFGLAG 182
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + + +++ G G+D ++G + N+ GND+ DG +G D+
Sbjct: 183 NDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSLAG 242
Query: 310 YAPSYLYKIYRFENAIIVYD-----ANEHKQDFLS 339
S Y R +Y+ AN QD +
Sbjct: 243 GLGSDTYVFRRGSGQDTIYNSVSNEANTDIQDVIV 277
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + +++ G G+D ++G N+ GND+ DG G+D+
Sbjct: 550 TLSGRAGNDILDGGEGNDTLYGEDGSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGK 609
Query: 312 PSYLYKIYRFENAIIVYDANEHKQD 336
S Y + + ++ +
Sbjct: 610 GSDTYTFRKGYGQDTINNSAYNDTT 634
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ N T++ +++ G GND++ G + ++ + +GND DG G DT S
Sbjct: 5 HDGNDTLSGEAGSDTLYGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGMGSDT 64
Query: 316 YKIYRFENAIIVYDANEH 333
Y + + + +
Sbjct: 65 YVLRKGSGQDQINNYTSD 82
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 31/73 (42%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + T+ + + G + D++ G + N+ GND DG G DT+
Sbjct: 10 TLSGEAGSDTLYGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGMGSDTYVLRK 69
Query: 312 PSYLYKIYRFENA 324
S +I + +
Sbjct: 70 GSGQDQINNYTSD 82
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 30/75 (40%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ H +++ G +G+D + G N++ + D+ G +G DT +
Sbjct: 1 TVYFHDGNDTLSGEAGSDTLYGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGM 60
Query: 321 FENAIIVYDANEHKQ 335
+ ++ + Q
Sbjct: 61 GSDTYVLRKGSGQDQ 75
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 36/155 (23%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF---- 321
++++G +GND++ G + ++V SGND G G DT+ + S I +
Sbjct: 392 DGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGADTYIFRKGSGQDTILNYAYSD 451
Query: 322 ------------ENAIIVYDANEHKQDFL--------------------SDVERLRFADQ 349
D + +++++F+D
Sbjct: 452 ATQNKLDVVKLEGLTASQVSIRREGDDLIFQISDTGETLRVSSHFSSDAYAIDQVQFSDG 511
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++L TA + + +D +
Sbjct: 512 IFWDKTQITAALLVGTAGDDSITGYATEDKLSGLA 546
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 7/136 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+++D+ LT G N T + G N T++ + + G G D +
Sbjct: 331 SVWDTSFIKSALLTGNAGDDNITGYETADM--LKGLRGNDTLSGRAGDDVLDGGDGRDTL 388
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G N+ +GND+ G +G D + + + I + QD + +
Sbjct: 389 NGEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGADTYIFRKGS--GQDTILN 446
Query: 341 VERLRFADQCIDSVNV 356
++D + ++V
Sbjct: 447 ---YAYSDATQNKLDV 459
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 249 SWSSIGGY-EKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGNDVFDG 300
S S+I GY + A T++E+ +G+ +DV+ G S ++V GND G
Sbjct: 678 SASTIYGYAIDQLQFADGTILENAQIRAALLLGTDADDVMTGYSTDDVIAGDGGNDTLSG 737
Query: 301 SSGLDTFFYYAPSYL 315
SG D
Sbjct: 738 GSGSDRIEGGDGKDN 752
>gi|221118670|ref|XP_002163794.1| PREDICTED: similar to matrix metalloproteinase [Hydra
magnipapillata]
Length = 600
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 77/216 (35%), Gaps = 45/216 (20%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEW 62
P +++ R + ++ +K LT L+ + L + ++V A +W
Sbjct: 145 GMPDFSSNTGTLLGSRKRRYALQGSAWKKTNLTWKLLNDNNDGLTRDQVEDVLIEAFTKW 204
Query: 63 SKVVDLTFE----ETSIHSDIKFIS---------------SNNGYVCTPRYDSRYFMEIN 103
KV L F+ ++S DI+ + P + +++
Sbjct: 205 EKVSSLNFKKLDLQSSEKVDIEVKFVQNYHQDPYVFDGLGGTLAHAFYPHTNEGLSGDVH 264
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FD A+++ G G L A+HEIGH++GL H + +M
Sbjct: 265 FDDAEMFTIGSSTGRNLLWVAVHEIGHSIGLEHSNVKDA-------------------IM 305
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+ + D DI+ VQ +YG+ K
Sbjct: 306 FPYYRGNKGNDFLLT------DDDILGVQTLYGSRK 335
>gi|163794872|ref|ZP_02188841.1| Hemolysin-type calcium-binding region [alpha proteobacterium
BAL199]
gi|159179691|gb|EDP64218.1| Hemolysin-type calcium-binding region [alpha proteobacterium
BAL199]
Length = 268
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 5/139 (3%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+ + +P T SG D + ++ LN + S+ G E + T
Sbjct: 118 AGDGTMVVTYSLGGAPADVTAVASG-----DAADVPALEAAGFLNPYAGSAQSGTEGDDT 172
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I +++ G GNDV+ G N+ SGND G +G D
Sbjct: 173 ITGGLGNDAISGLGGNDVLSGGDGNDTLDGGSGNDTLVGGAGNDVLSGGDGDDALYGGAG 232
Query: 322 ENAIIVYDANEHKQDFLSD 340
+ + + D L D
Sbjct: 233 DTIVGGTGNDTVYVDSLDD 251
>gi|21693575|gb|AAM75352.1|AF520613_1 matrix metalloproteinase-21 [Homo sapiens]
gi|21928002|gb|AAM78033.1| MMP21 protein [Homo sapiens]
gi|58003496|gb|AAW62254.1| matrix metalloproteinase 21 [Homo sapiens]
Length = 569
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 45 TELNPN-AQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY- 98
++L+ + + A WS+V L F E + + DIK ++ PR
Sbjct: 187 SQLSAADQRRIVALAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSG 246
Query: 99 --------FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + + G L A+HEIGH LGL P +Y G
Sbjct: 247 QEFAHAWRLGDIHFDDDEHFTPPTSDTGISLLKVAVHEIGHVLGL--PHTYRTG------ 298
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + +F SD A+QK+YG+
Sbjct: 299 -----------SIM---QPNYIPQEPAFE----LDWSDRKAIQKLYGS 328
>gi|119484363|ref|ZP_01618980.1| beta-lactamase, putative [Lyngbya sp. PCC 8106]
gi|119457837|gb|EAW38960.1| beta-lactamase, putative [Lyngbya sp. PCC 8106]
Length = 1543
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 71/211 (33%), Gaps = 30/211 (14%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDL-----TLIGGVKNY----IDLNTESWSS 252
N ++ +E I+ + G+D +D ++ GG N D N W +
Sbjct: 1270 NTLFGMEGNDNIYSQDGDDLIFGNQGNDHIDTGLGNDSIYGGKNNDAVWGQDGNDMIWGN 1329
Query: 253 IG-----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N +I + + G G D + G+ N+V GND G+ G D
Sbjct: 1330 LDSDSLMGSSGNDSIYGGQEDDYLWGGLGEDWLFGDIGNDVVSGGDGNDNVFGNKGNDEL 1389
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
F + + I+ ++ + N+ + L F + D + + + Y
Sbjct: 1390 FGNSGND--TIFAGKDNDSICGGND---------QDLLFGNLGADLIRGGEGNDSLYGGQ 1438
Query: 368 -YEDLIQVIGQDVFESM--KHFYEFGLSEGR 395
+ L G D+ G E
Sbjct: 1439 ENDTLTGGNGNDLISGDLGNDLLIGGEGEDT 1469
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 26/190 (13%)
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSP 217
S+M Y + D + G +GN++ +
Sbjct: 1334 SLMGSSGNDSIYGGQEDDYLWGGLGEDWL---------FGDIGNDVVSGGDGNDNVFGNK 1384
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
++ + G+D + G N SI G + + + + G GN
Sbjct: 1385 GNDELFGNSGNDTI----FAGKDND---------SICGGNDQDLLFGNLGADLIRGGEGN 1431
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G N+ +GND+ G G D + I + D QD
Sbjct: 1432 DSLYGGQENDTLTGGNGNDLISGDLGNDLLIGGEGEDTFLISSTTEKDRIADFVI-GQDK 1490
Query: 338 LSDVERLRFA 347
++ L F
Sbjct: 1491 IALTGNLTFD 1500
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 13/184 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
E+ + +QTI + + L ++ I++NT + G E N I +
Sbjct: 1234 EITPNPNSVVQTINTADSEPTLGTVENDEIRGDINVNT-----LFGMEGNDNIYSQDGDD 1288
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ GND + N+ + ND G G D + S ++I
Sbjct: 1289 LIFGNQGNDHIDTGLGNDSIYGGKNNDAVWGQDGNDMIWGNLDSDSLMGSSGNDSIYGGQ 1348
Query: 330 ANEH-----KQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+++ +D+L + + D + K L + + + D
Sbjct: 1349 EDDYLWGGLGEDWLFGDIGNDVVSGGDGNDNVFGNKGNDELFGNSGNDTIFAGKDNDSIC 1408
Query: 382 SMKH 385
Sbjct: 1409 GGND 1412
>gi|313496540|gb|ADR57906.1| Surface adhesion protein, putative [Pseudomonas putida BIRD-1]
Length = 8682
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V YI + + G + N ++ + + G G+D + G N++ +G
Sbjct: 8498 TTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGGSDTLNGGKGNDILLGGTG 8557
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
ND G G D + + + + ++ D N+ + D +
Sbjct: 8558 NDTLIGGQGDDILIGGSGADTFVWKAGDVGNDVIKDFNKAEGDRI 8602
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A+Q Y A K + + T +D G + L GG N I
Sbjct: 8481 ALQ-TYVAQKSGVEVGAVTTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGG 8539
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---ESSGNDVF 298
++ G + N + T ++++G G+D++IG S + F GNDV
Sbjct: 8540 SDTLNGGKGNDILLGGTGNDTLIGGQGDDILIGGSGADTFVWKAGDVGNDVI 8591
>gi|26986912|ref|NP_742337.1| surface adhesion protein, putative [Pseudomonas putida KT2440]
gi|24981520|gb|AAN65801.1|AE016208_1 surface adhesion protein, putative [Pseudomonas putida KT2440]
Length = 8682
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V YI + + G + N ++ + + G G+D + G N++ +G
Sbjct: 8498 TTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGGSDTLNGGKGNDILLGGTG 8557
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
ND G G D + + + + ++ D N+ + D +
Sbjct: 8558 NDTLIGGQGDDILIGGSGADTFVWKAGDVGNDVIKDFNKAEGDRI 8602
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A+Q Y A K + + T +D G + L GG N I
Sbjct: 8481 ALQ-TYVAQKSGVEVGAVTTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGG 8539
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---ESSGNDVF 298
++ G + N + T ++++G G+D++IG S + F GNDV
Sbjct: 8540 SDTLNGGKGNDILLGGTGNDTLIGGQGDDILIGGSGADTFVWKAGDVGNDVI 8591
>gi|126462926|ref|YP_001044040.1| glycoside hydrolase family protein [Rhodobacter sphaeroides ATCC
17029]
gi|126104590|gb|ABN77268.1| glycoside hydrolase, family 16 [Rhodobacter sphaeroides ATCC 17029]
Length = 475
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 13/139 (9%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + ++ +G + L + GG + G + + +
Sbjct: 309 TGTAAINGAGNGLANVLWGNGAANRL--SGGGGNDR-----------LEGRDGSDVLNGG 355
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T ++++G +G+D + G + ++ SGND DG D A + +
Sbjct: 356 TGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGRD 415
Query: 326 IVYDANEHKQDFLSDVERL 344
++ D ++
Sbjct: 416 VITDFRVGNGGDRLEIHDY 434
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 21/133 (15%)
Query: 271 VVGSSGN---DVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYYAPSYLYKI 318
+ +GN +V+ GN A N GN DV +G +G DT A
Sbjct: 313 AINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRLAG 372
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ N+ + D+ + + + + D+I
Sbjct: 373 GTGSDRLVGGSGNDRLDGGI---------DRDVLTGGAGADTFVFAAGYGRDVITDFRVG 423
Query: 379 VFESMKHFYEFGL 391
+++
Sbjct: 424 NGGDRLEIHDYAA 436
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 3/117 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+SG D++ G N+ D G +G DT+ ++ +
Sbjct: 233 DDLRGTSGEDLLYGFGGNDTLRGGGAADRMIGGTGNDTYIVDHAGD--EVVERAGEGLDR 290
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMK 384
+ VERL + ++L + L G D E
Sbjct: 291 VCASVSHQLAAHVERLMLTGTAAINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRD 347
>gi|255261460|ref|ZP_05340802.1| type I secretion target repeat protein [Thalassiobium sp. R2A62]
gi|255103795|gb|EET46469.1| type I secretion target repeat protein [Thalassiobium sp. R2A62]
Length = 324
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 61/180 (33%), Gaps = 18/180 (10%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS-- 284
G D D+ G + +D + + + + T+ T ++ + G G D +IG
Sbjct: 80 GTDECDIIYSGDTDDTVDGSAGND-HLDDEGGDDTLIGGTGMDVLHGGLGTDTLIGGEDG 138
Query: 285 -------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH---- 333
++ +GND +G G DT + ++ +I N+
Sbjct: 139 DALYGHMQDDHLDGGAGNDTLNGGDGHDTMIGGGGDDMALGGSGDDIMIGGVGNDTLQGG 198
Query: 334 -KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D + E +D D +N R AS +D+ + + + G +
Sbjct: 199 IGDDTIDGRE--ETSDAQQDFLNGG-RGDDTLIASNDDIAHGSSGNDNFVVGDWISKGQN 255
Score = 41.3 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 57/194 (29%), Gaps = 36/194 (18%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTI 262
+ + ++ G D L D + G L+ + + + G + + T+
Sbjct: 109 GGDDTLIGGTGMDVLHGGLGTDTLIGGEDGDALYGHMQDDHLDGGAGNDTLNGGDGHDTM 168
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG---------------------- 300
+ +G SG+D++IG N+ G+D DG
Sbjct: 169 IGGGGDDMALGGSGDDIMIGGVGNDTLQGGIGDDTIDGREETSDAQQDFLNGGRGDDTLI 228
Query: 301 ---------SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SSG D F + ++ D+ D + + + A
Sbjct: 229 ASNDDIAHGSSGNDNFVVGDWISKGQNATIKDFDTTEDSLIIAYDLSTGLPDVAVATTNG 288
Query: 352 DSVNVKQRSILEYT 365
+ + I+
Sbjct: 289 NLGVLLNGQIVATL 302
>gi|207739511|ref|YP_002257904.1| hemagglutinin/hemolysin-related protein [Ralstonia solanacearum
IPO1609]
gi|206592890|emb|CAQ59796.1| hemagglutinin/hemolysin-related protein [Ralstonia solanacearum
IPO1609]
Length = 3347
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N I + +++ G GND++ G + N+V +GND+ G +G DT A
Sbjct: 3163 TLTGTSGNDRIYGYAGDDTLSGGDGNDLLRGGAGNDVLNGGNGNDILIGGAGNDTLTGGA 3222
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ + + D ++D D ++ YTA +
Sbjct: 3223 GGDIFLWQVNAAD----NTGGNGTDVITDFTLASGPDDATADRIDVSALLVGYTAEAD 3276
>gi|163736619|ref|ZP_02144038.1| hypothetical protein RGBS107_15846 [Phaeobacter gallaeciensis
BS107]
gi|161390489|gb|EDQ14839.1| hypothetical protein RGBS107_15846 [Phaeobacter gallaeciensis
BS107]
Length = 498
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
K T++ GDD+L+ GG + + ++ G N T+ +
Sbjct: 318 NDTLKAGNGADTLHGGAGDDILN----GGRGRDLITGDDGRDTLAGGRANDTLTGGAGND 373
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +G+DV+ G++ N++ G+D GS G D + ++ +
Sbjct: 374 RLSGGAGHDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSGGDSFVF-- 431
Query: 330 ANEHKQDFLSDVE 342
A +D ++D +
Sbjct: 432 ARGSGRDTITDFQ 444
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ GDD L +L L + + + ++ + ++G SG+D + GN+
Sbjct: 263 NAGDDNLRGSLGNDT-----LIGGAGNDTLRGDNDVG-PDDNADDLLIGGSGHDSLDGNA 316
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLS 339
N+ +G D G +G D L + + AN+ D LS
Sbjct: 317 GNDTLKAGNGADTLHGGAGDDILNGGRGRDLITGDDGRDTLAGGRANDTLTGGAGNDRLS 376
Query: 340 DV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEG 394
+ +R + + L + + LI G D + F G
Sbjct: 377 GGAGHDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSGGDSFVFARGSG 436
Query: 395 RDITFD 400
RD D
Sbjct: 437 RDTITD 442
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 11/144 (7%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ ++ +I S + + G + N+ G+D G +G D + Y
Sbjct: 101 VALSGDDIITSAWNGG--ERITGFAGNDTIRAGDGDDTIFGGAGQDELVLGDGVHTYSF- 157
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCI-----DSVNVKQRSILEYTASYEDLIQV 374
F+++ +D L +VE +R A+Q + + + S + D+I
Sbjct: 158 AFDDSAGALLTTTKGRDMLFNVETVRLANQTLRIQEGSATDEALLSTNVDDTNRSDMIHG 217
Query: 375 IGQD---VFESMKHFYEFGLSEGR 395
G D + + F G E R
Sbjct: 218 RGGDDTITGGAGRDFLLGGAGEDR 241
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 67/233 (28%), Gaps = 33/233 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + LG+ ++ DS G D L ++ + + + S +
Sbjct: 142 GQDELVLGDGVHTYSFAFDDSAGALLTTTKGRDMLFNVETVRLANQTLRIQEGSATDEAL 201
Query: 256 YEKNM-------TIAQHTVIESVVGSSGNDVVIGNSANNVFFE----------------- 291
N+ I +++ G +G D ++G + +
Sbjct: 202 LSTNVDDTNRSDMIHGRGGDDTITGGAGRDFLLGGAGEDRLSGGKNDDFLDGGLDDDHLS 261
Query: 292 -SSGNDVFDGSSGLDTFFYYAPSYLYKI------YRFENAIIVYDANEHKQDFLSDVERL 344
++G+D GS G DT A + + + +++ + D + + L
Sbjct: 262 GNAGDDNLRGSLGNDTLIGGAGNDTLRGDNDVGPDDNADDLLIGGSGHDSLDGNAGNDTL 321
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHFYEFGLSEGR 395
+ + IL + + G+D G R
Sbjct: 322 KAGNGADTLHGGAGDDILNGGRGRDLITGDDGRDTLAGGRANDTLTGGAGNDR 374
>gi|300864907|ref|ZP_07109751.1| hypothetical protein OSCI_1150001 [Oscillatoria sp. PCC 6506]
gi|300337078|emb|CBN54901.1| hypothetical protein OSCI_1150001 [Oscillatoria sp. PCC 6506]
Length = 1078
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 9/162 (5%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI G+D + GG+ ++ + E + G N I ++++G GND
Sbjct: 833 DTIVGDSGNDTI----YGGLNDFFKTDPEGRDVLFGGIGNDLINGQEGDDTIIGEEGNDT 888
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G N+ SGND+ G +G D + IY + V ++D ++
Sbjct: 889 LRGGKENDGLRGGSGNDLMLGDNGNDLLCGDEGND--TIYGDNKGVSVAVGGSGQRDCIN 946
Query: 340 DVE--RLRFADQCIDSVNVKQRS-ILEYTASYEDLIQVIGQD 378
E L + ++ D++N + L + L G D
Sbjct: 947 GGEGDDLIYGNEGEDNLNGDDGNDSLAGGKDNDILSGGTGDD 988
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 71/206 (34%), Gaps = 14/206 (6%)
Query: 204 NNIY--KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVK--NYIDLNTESWSSIG 254
+ IY K I+ D+L D T+ GGV + DLN + +
Sbjct: 662 DTIYAGKENDLVHGGKNNDLIWGDLNSDILIGDSGDDTIFGGVNDLSVSDLNPDL---LF 718
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + ++V+G G D+ G N+ F +D G G DT S
Sbjct: 719 GGSGNDYLNGNEGDDTVIGGEGKDIAYGGKGNDWIFGQLDSDTLYGGEGNDTILGDRGSN 778
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ +I D + + + + K ++ + + ++
Sbjct: 779 GEVAPVGQEDLIFGDRGDDIIGGGDGNDTIHAGKENDLVYGGKGDDLIWGELNSDTIVGD 838
Query: 375 IGQDVF-ESMKHFYEFGLSEGRDITF 399
G D + F++ EGRD+ F
Sbjct: 839 SGNDTIYGGLNDFFKTD-PEGRDVLF 863
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D + G + I G E + I + +++ G GND + G N
Sbjct: 921 GNDTIYGDNKGVSVAVG--GSGQRDCINGGEGDDLIYGNEGEDNLNGDDGNDSLAGGKDN 978
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ +G+D G SG DT + ++ + V +
Sbjct: 979 DILSGGTGDDWLVGDSGEDTLIGGIGNDVFVLSPNSGVDTVLN 1021
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 14/108 (12%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE + G GND++ GNS +N F G D G G D + S
Sbjct: 588 IEIISGDRGNDLLTGNSGDNWLFGDRGADTIHGDRGADILIGDSGSAN------------ 635
Query: 328 YDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++D + E + D++ + + L + DLI
Sbjct: 636 PGDGAGEEDLIFGEEENDIIGGGDGNDTIYAGKENDLVHGGKNNDLIW 683
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 8/136 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-------- 304
IGG + N TI + V G ND++ G+ +++ SG+D G
Sbjct: 655 IGGGDGNDTIYAGKENDLVHGGKNNDLIWGDLNSDILIGDSGDDTIFGGVNDLSVSDLNP 714
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D F + + ++ +I + + + D +IL
Sbjct: 715 DLLFGGSGNDYLNGNEGDDTVIGGEGKDIAYGGKGNDWIFGQLDSDTLYGGEGNDTILGD 774
Query: 365 TASYEDLIQVIGQDVF 380
S ++ V +D+
Sbjct: 775 RGSNGEVAPVGQEDLI 790
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 14/104 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGSSG 303
+ G + + I +++VG SGND + G +V F GND+ +G G
Sbjct: 817 VYGGKGDDLIWGELNSDTIVGDSGNDTIYGGLNDFFKTDPEGRDVLFGGIGNDLINGQEG 876
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSDVE 342
DT + + + + + N ++ D L E
Sbjct: 877 DDTIIGEEGNDTLRGGKENDGLRGGSGNDLMLGDNGNDLLCGDE 920
Score = 42.0 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 54/178 (30%), Gaps = 30/178 (16%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG---------- 294
L I G N + ++ + G G D + G+ ++ SG
Sbjct: 583 LFAGGIEIISGDRGNDLLTGNSGDNWLFGDRGADTIHGDRGADILIGDSGSANPGDGAGE 642
Query: 295 ---------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
ND+ G G DT + + L + N +I D N S + +
Sbjct: 643 EDLIFGEEENDIIGGGDGNDTIYAGKENDLVHGGK-NNDLIWGDLNSDILIGDSGDDTI- 700
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
F SV+ +L + + L G D EG+DI +
Sbjct: 701 FGGVNDLSVSDLNPDLLFGGSGNDYLNGNEGDDTVIG---------GEGKDIAYGGKG 749
>gi|300867068|ref|ZP_07111735.1| putative secreted calcium-binding protein [Oscillatoria sp. PCC
6506]
gi|300334899|emb|CBN56901.1| putative secreted calcium-binding protein [Oscillatoria sp. PCC
6506]
Length = 269
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 17/159 (10%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GG D + + + I G + +I + +S+ G GND ++
Sbjct: 36 VWALGGKDTVTGSSDAEL-------------IFGNNDSDSIFGGSGNDSLFGGKGNDDIL 82
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G S +++ D DG SG D L + N ++ D +
Sbjct: 83 GESGDDILTGEKNRDFLDGGSGNDLLRGGVGVDLL-VGGEGNDTLIGDKDVDIYKGGLGS 141
Query: 342 ERLRF-ADQCIDSVNVKQ--RSILEYTASYEDLIQVIGQ 377
+ F ADQ + +++ +DLI + G
Sbjct: 142 DVFVFRADQSGVRAVGIELPDAVIVDFNKSDDLIGLTGG 180
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 1/117 (0%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E V G D V G+S + F ++ +D G SG D+ F + + + I+
Sbjct: 34 EGVWALGGKDTVTGSSDAELIFGNNDSDSIFGGSGNDSLFGGKGNDDI-LGESGDDILTG 92
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ N D S + LR V + L + +G DVF
Sbjct: 93 EKNRDFLDGGSGNDLLRGGVGVDLLVGGEGNDTLIGDKDVDIYKGGLGSDVFVFRAD 149
>gi|158147670|emb|CAM84377.1| hemolysin HlyA [Escherichia coli]
Length = 1024
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G ++ + GND G G DT +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQL----YGGDG 781
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
++L+ + D+ N +++L + L G D+ +
Sbjct: 782 NDKLIGGAGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 16/121 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD ++ G + Y D ++ S G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDHIEG-NDGNDRLYGDKGNDTLS---GGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GN+ + G + NV GND GS G D + L K
Sbjct: 789 AGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 323 N 323
+
Sbjct: 849 D 849
>gi|227820945|ref|YP_002824915.1| hemolysin-type calcium-binding repeat-like hypothetical protein
[Sinorhizobium fredii NGR234]
gi|227339944|gb|ACP24162.1| hemolysin-type calcium-binding repeat-like hypothetical protein
[Sinorhizobium fredii NGR234]
Length = 985
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 17/164 (10%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++YG GN+ + + G D L+ +I +DL + +
Sbjct: 770 RLYG----DAGNDTFDRFSDGTGTDHFD---GGSGVDTLEFDIISDQSVIVDLENSARN- 821
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
GG +T+ IE+VVG + +D ++GN N G+D DG +G D A
Sbjct: 822 -GGVATGLTL---VSIENVVGQNTDDTILGNGVANTLKGGMGDDRLDGRAGNDKLEGGAH 877
Query: 313 SYLYKIYRFENAII-----VYDANEHKQDFLSDVERLRFADQCI 351
L + I + + DF ++L
Sbjct: 878 GDLLTGGTGADQFIYASGDAIGSGDQITDFKRGEDKLVIDKGVF 921
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 50/159 (31%), Gaps = 14/159 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-------- 251
G G++ + + ++ G D L ++ KN + + + +
Sbjct: 529 GGAGSDSLSVNYGGGSTAGRFSVDGGSGTDTLWISRYDSTKNLTFVLSANATLVNGDVTV 588
Query: 252 ------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + + T+ ++ + + G GND + G ++ +G D G G D
Sbjct: 589 KNIEKINFTSGQGHDTLTAGSLDDDLNGMGGNDTLKGLGGDDDLTGWTGADTLYGGDGND 648
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ R N + D+ S +
Sbjct: 649 GLWGSGGIKDTSADRLHGEKGNDVLNVNAGDYASGGDGF 687
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 6/141 (4%)
Query: 203 GNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
GN++ + S + G++ D++ + G S++ + E
Sbjct: 669 GNDVLNVNAGDYASGGDGFDRLVIEFGEETFDVSFVFGNGLVKVNANTSFTGMEALEY-- 726
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ ++V GS+ D + G N+ GND G D + A + + +
Sbjct: 727 --VGGSGKDAVTGSAQIDYLDGGLGNDTLRGGGGNDYLIDGRGNDRLYGDAGNDTFDRFS 784
Query: 321 FENAIIVYDANEHKQDFLSDV 341
+D D+
Sbjct: 785 DGTGTDHFDGGSGVDTLEFDI 805
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 1/130 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF-ESSGNDVFDGSSGLDTFFYY 310
++ GY N T+ + + G G+D++ G N++ S G DV G +G DT +
Sbjct: 348 TLSGYSGNDTLIGLAGNDHLDGGLGSDILDGGDGNDLLIVGSGGKDVIKGGTGYDTIWID 407
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + ++ + I S ++ +
Sbjct: 408 RSDGTTGLTFTVSGTTAKLSDGTVVTDGESFRIETGSGSDIISAGTAGYLSIDAGSGNNR 467
Query: 371 LIQVIGQDVF 380
L G D F
Sbjct: 468 LTGGKGGDSF 477
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 28/72 (38%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T +++ G SGND +IG + N+ G+D+ DG G D +
Sbjct: 344 TGADTLSGYSGNDTLIGLAGNDHLDGGLGSDILDGGDGNDLLIVGSGGKDVIKGGTGYDT 403
Query: 326 IVYDANEHKQDF 337
I D ++
Sbjct: 404 IWIDRSDGTTGL 415
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 53/169 (31%), Gaps = 18/169 (10%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+ D G ++ F +G+DV +G G D + +IY V
Sbjct: 131 GSNFADSFTGGRWDDWFEGGAGDDVLNGGIGKD--WLSGDGGSDRIYGGNGGDSVLGGA- 187
Query: 333 HKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D+LS V+ L + + L + +++ G D
Sbjct: 188 -GDDYLSGGYGVDWLSADEGNDTLLGGAGGDYLYGHSGNDNIKGESGTDTISGGS----- 241
Query: 390 GLSEGRDITF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
GRD YL D V G RH + +G++
Sbjct: 242 ----GRDTIDGGSEDDYLAGDGDNDTVLGGAGNDTIRHNMESWANDGKD 286
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 22/145 (15%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I +SV+G +G+D + G + GND G +G D + ++
Sbjct: 165 LSGDGGSDRIYGGNGGDSVLGGAGDDYLSGGYGVDWLSADEGNDTLLGGAGGDYLYGHSG 224
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ K E D +S + S +Y A D
Sbjct: 225 NDNIK-------------GESGTDTISG---------GSGRDTIDGGSEDDYLAGDGDND 262
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDI 397
V+G ++++H E ++G+D+
Sbjct: 263 TVLGGAGNDTIRHNMESWANDGKDV 287
Score = 37.4 bits (85), Expect = 8.1, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT-IAQHTVIES-----VVGSS 275
I SGG D++ G +ID + + ++ TV+ + S
Sbjct: 386 IVGSGGKDVIKG-GTGYDTIWIDRSDGTTGLTFTVSGTTAKLSDGTVVTDGESFRIETGS 444
Query: 276 GNDVVIGNSANNV-FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D++ +A + SGN+ G G D+F+ + S ++ I Y +K
Sbjct: 445 GSDIISAGTAGYLSIDAGSGNNRLTGGKGGDSFYSTSGSDTVSGGDGDDRIADYGGGTNK 504
Query: 335 QD 336
D
Sbjct: 505 LD 506
>gi|309366330|emb|CAP21608.2| hypothetical protein CBG_00098 [Caenorhabditis briggsae AF16]
Length = 381
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
++ + + G + + RY +++FD+ ++W KG L A+
Sbjct: 66 ANIDIVFAAGDHEDGEPFDGKGNILAHAFFPRYGGDVHFDEDEMWSANKSKGVDLYAVAV 125
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HEIGH+LGL H ++ S+M+ F Q + G
Sbjct: 126 HEIGHSLGLKHSANH-------------------LSIMAPFYKQYT------GNVMHLHQ 160
Query: 186 SDIVAVQKIYGAP 198
DI AV+++YG+P
Sbjct: 161 DDIQAVKRLYGSP 173
>gi|325496384|gb|EGC94243.1| adhesin for cattle intestine colonization [Escherichia fergusonii
ECD227]
Length = 4932
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + S
Sbjct: 4708 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSVTTAQATG 4761
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y S
Sbjct: 4762 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTINIGNGGHDTLLYKLLSASDAT 4821
Query: 319 YRFENAII 326
+ ++
Sbjct: 4822 GGNGSDVV 4829
>gi|254505835|ref|ZP_05117980.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Vibrio parahaemolyticus 16]
gi|219551058|gb|EED28038.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Vibrio parahaemolyticus 16]
Length = 5819
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 12/127 (9%)
Query: 227 GDDLLDLTLIGGVKN-------YIDLN-----TESWSSIGGYEKNMTIAQHTVIESVVGS 274
G+ L +T I N +DLN S +++ + +
Sbjct: 5604 GNHTLTVTAISQESNGDTASSTSLDLNLDVVIDGSTIDQSTQAQDVQLIGDGGNTELHSG 5663
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D++ G S N+ SG+D G G D S + + + D ++
Sbjct: 5664 SGDDLLQGGSGNDHLIGGSGDDHLQGGEGDDILEGGLGSDILTGGGGMDTFVWLDIDDGA 5723
Query: 335 QDFLSDV 341
D ++D
Sbjct: 5724 TDTITDF 5730
>gi|260808835|ref|XP_002599212.1| hypothetical protein BRAFLDRAFT_199955 [Branchiostoma floridae]
gi|229284489|gb|EEN55224.1| hypothetical protein BRAFLDRAFT_199955 [Branchiostoma floridae]
Length = 158
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 31/154 (20%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
W+ + Y+ T ++ + R L WS V L FE+TS +SDI+
Sbjct: 2 WNKRKLTYRIKNYTPDLPEEEV-------DDAVRRGLQVWSNVTPLVFEKTSAYSDIEMS 54
Query: 83 SSNNGY------VCTPRYDSRYF-------MEINFDKADVWRYGIGKG---TILSHNALH 126
G+ + F +++FD ++ W +G T L A H
Sbjct: 55 FEKYGHGDEDPLDGPGGTLAHAFFPGPGIGGDVHFDDSETWTVRSFRGGLRTNLFIVAAH 114
Query: 127 EIGHALGLMHPGS--------YNGGYPVYGVDND 152
E+GH+LGL H Y G P + + D
Sbjct: 115 ELGHSLGLDHSDVRGSLMFPIYQGYTPNFKLHKD 148
>gi|72383060|ref|YP_292415.1| hypothetical protein PMN2A_1222 [Prochlorococcus marinus str.
NATL2A]
gi|72002910|gb|AAZ58712.1| hypothetical protein PMN2A_1222 [Prochlorococcus marinus str.
NATL2A]
Length = 392
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 78/215 (36%), Gaps = 38/215 (17%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHS----DI-------KFISSNNGYVCTPRYDS 96
N Q + ++DL F E S ++ DI F + G + +
Sbjct: 65 NQEEQNFIKDIFNRLDLIIDLDFYEMSHNNGSMLDIYHITYSSHFEQNVIGQAIQQKTST 124
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ +I + + R K + LHEIGH LGL HP D +N
Sbjct: 125 GGWWDIFWKDSPNERSSDSKEN--FNTILHEIGHTLGLSHPND----------DPFDKNF 172
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-----GSLGNNI-YKIE 210
+ ++MSY + DI A+ KI+G G+++ YK +
Sbjct: 173 NSQDTIMSYNKGP-------GDWGHWFSTKDINALIKIWGRENDLGFIDFDGDSVQYKFK 225
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ FI+T G +D+ ++ + I++
Sbjct: 226 KSEDKKYFIETEI--GFEDITNIYSLNFTDKTINV 258
>gi|47221888|emb|CAF98900.1| unnamed protein product [Tetraodon nigroviridis]
Length = 553
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 29/162 (17%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--- 72
++ Q W I Y + T ++ + E + R AL W +V LTF+E
Sbjct: 78 YVTTAQRWDKDHITYS---ILTQQIPSSLGERRTL--DTIRKALDMWQRVTPLTFKELPA 132
Query: 73 -----------------TSIHSDIKFISSNNGYVCTPRYDSRY-FMEINFDKADVWRYGI 114
+ H D+ G + Y + +FD + W
Sbjct: 133 VPSSNQSALADIMLLFASGFHGDMSLFDGPGGSLAHAFYPGPGMGGDTHFDADEHWTLDS 192
Query: 115 GK--GTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
G L A+HE+GHALGL H + + P+Y + +
Sbjct: 193 QSEEGIDLFLVAVHELGHALGLEHSENPSAVMAPLYRWRHTH 234
>gi|254476763|ref|ZP_05090149.1| hypothetical protein RR11_2601 [Ruegeria sp. R11]
gi|214031006|gb|EEB71841.1| hypothetical protein RR11_2601 [Ruegeria sp. R11]
Length = 1330
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 18/181 (9%)
Query: 204 NNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+N+Y TI+ G D + L + ++ G E +
Sbjct: 1157 DNVYGRADDDHLRGGWGDDTIHGGTGSDTI-------------LAGQGHDTVFGGEGSDR 1203
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + V +D V G N+ G D +G +G D A S + +
Sbjct: 1204 VRAGWGDDKVFLGLADDHVFGGKGNDTLIGGMGRDTLNGGAGNDRLRGGADSDTFIFAKG 1263
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D + D L ++ F+ ++++ + ++ S++D +I +DV E
Sbjct: 1264 RGMDTIAD-FDATMDVL-ELRNFGFSS-PQEALSFGAQQGDDFVFSFDDGSGLILRDVSE 1320
Query: 382 S 382
+
Sbjct: 1321 A 1321
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 79/251 (31%), Gaps = 25/251 (9%)
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIVAVQKIYGAPKGSLGNNIYKIEV 211
++ TS MS + + G +TP D+ +L + I
Sbjct: 1006 FDAADGATSDMSLITVTVTAPPSPGGGGSTPQAPVDVTGGSDGETFDGTNLNDTINGDGG 1065
Query: 212 QQKDSPFI--QTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSSIGG 255
+ ++ G+D + + + GG N + L + G
Sbjct: 1066 DDLIRGGLGQDSLMGGIGNDTIRGNAGEDELFLGSGNDSGFGGDGNDLVLAGPGQDLVRG 1125
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ N T+ + +++ G GND V N+ + + +D G G DT S
Sbjct: 1126 HQGNDTLHGGSNADTIFGGRGNDSVFAGKGNDNVYGRADDDHLRGGWGDDTIHGGTGSDT 1185
Query: 316 -------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTAS 367
++ E + V + FL + F + D+ + R L A
Sbjct: 1186 ILAGQGHDTVFGGEGSDRVRAGWGDDKVFLGLADDHVFGGKGNDTLIGGMGRDTLNGGAG 1245
Query: 368 YEDLIQVIGQD 378
+ L D
Sbjct: 1246 NDRLRGGADSD 1256
>gi|156405599|ref|XP_001640819.1| predicted protein [Nematostella vectensis]
gi|156227955|gb|EDO48756.1| predicted protein [Nematostella vectensis]
Length = 222
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 61/198 (30%), Gaps = 53/198 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF--EETSI 75
LR + W + Y L D + + + AL WS V L+F
Sbjct: 59 LRIRSWDKRHLTYHI--TYGRDLDKD------SQRRIFARALQYWSDVSGLSFSPTNNGG 110
Query: 76 HSDIKFISSNNGYVCTPRYDSRYF-----------------MEINFDKADVWRYGIGKGT 118
+DIK + + + +FD+ + + G GT
Sbjct: 111 SADIKISFGARSHGGPHDGNRCAYAFDGPGKVLAHAFFPSNGRAHFDEDETYTDGTPSGT 170
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A HE GHALGL H N VM P + A+F
Sbjct: 171 NLMWVATHEFGHALGLEHSDVRNA-------------------VM---YPYYTGYVANFR 208
Query: 179 YCATPMVSDIVAVQKIYG 196
DI +Q +YG
Sbjct: 209 ----LQDDDIRGIQVLYG 222
>gi|218672447|ref|ZP_03522116.1| Hemolysin-type calcium-binding region [Rhizobium etli GR56]
Length = 256
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + N A V + GS G+DV+ GN ++ +GND +G +G+DT +
Sbjct: 168 DVKTGDGNDEFAGSDVKDIFDGSGGSDVINGNGGDDKLTGGAGNDTINGGAGIDTAVFAG 227
Query: 312 PSYLYKIYRFENAIIVYDA 330
Y + + ++ A
Sbjct: 228 NFANYSLAVDNGSRVMTSA 246
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 10/123 (8%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---GLDTFF------- 308
N TI+ +++ G +G+D + GN+ N+ GND G D
Sbjct: 1 NDTISGGDGADTLSGGAGDDTIYGNAGNDTLLGGDGNDRITDGGFNFGPDGLLPEILNID 60
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I RF I D L ++++ I +A +
Sbjct: 61 AGNGDDVITIDRFAAFISGTIDGGDGIDALRAWSLHGLTLNNVENLETAAFQISGSSAQF 120
Query: 369 EDL 371
E
Sbjct: 121 ESF 123
Score = 40.1 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 27/90 (30%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ G D G +G DT + A + + I N L ++ +
Sbjct: 1 NDTISGGDGADTLSGGAGDDTIYGNAGNDTLLGGDGNDRITDGGFNFGPDGLLPEILNID 60
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + + T D I +
Sbjct: 61 AGNGDDVITIDRFAAFISGTIDGGDGIDAL 90
>gi|159044966|ref|YP_001533760.1| hypothetical protein Dshi_2425 [Dinoroseobacter shibae DFL 12]
gi|157912726|gb|ABV94159.1| hypothetical protein Dshi_2425 [Dinoroseobacter shibae DFL 12]
Length = 559
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G D LDL+ G ++L T + G + I E+V G+ NDV++GN
Sbjct: 407 GDGVDTLDLSQASG-PVGVNLETGAIEVDHGAGQAAAAINF----ENVTGTDSNDVIVGN 461
Query: 284 SANNVFFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFENAI 325
+ +NV G+D G +G DTF F+ A + I FE I
Sbjct: 462 AQDNVIRGGLGDDTMSGGAGADTFVFFEADIGVDVILDFEIGI 504
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 25/176 (14%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM--------TIAQHTVIE------- 269
G D LD + + ++L T + ++ ++A V+E
Sbjct: 190 GDGIDTLDFSQL-DTNVSVNLETGQIVDNVFFAASLPEEFEIGASLAAAPVVETSQAIDF 248
Query: 270 -SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+V+G+ +D + GN+ +NV GND G +G DT S ++ I+
Sbjct: 249 ENVIGTEFSDALTGNAWDNVISGGGGNDRIAGGAGNDTLIGNKGSDTVDGGSGDDKIVW- 307
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N D AD + VN + E +D+ + D
Sbjct: 308 -NNGDGSDLFDGG-----ADDDVVQVNFDTDLVNEDL-QNKDVAEFSTTDAGVQFA 356
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 9/153 (5%)
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N+ +L ++ G +K++ I + + G+D+V G S ++ G+D G
Sbjct: 5 NFFNLIFGHGNTHGTEDKDI-IVGSFGADDINAKGGDDLVFGLSGDDKISGGEGDDQLFG 63
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D S ++ + + N D + E
Sbjct: 64 GFGDDVVIGNRGSD--AMFGGQGDDRLVWNNGDGSDLMDGGEGHD------VQQVNFDTD 115
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
++ +D+ + D G SE
Sbjct: 116 LVNDDLQNDDVAEFTVTDAGLQFARIEVNGQSE 148
>gi|1705980|sp|P55032|MMP7_FELCA RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|436482|gb|AAA18222.1| PUMP-1 [Felis catus]
Length = 262
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 61/188 (32%), Gaps = 46/188 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W + + Y+ T + L VA+ AL WSK + L+F
Sbjct: 99 WISKVVTYRIISYTRDLPRVTVDHL------VAK-ALNMWSKEIPLSFRRVVLGIPDIVI 151
Query: 74 ----SIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F + +FD+ + W G G G A HE+
Sbjct: 152 GFARGAHGDFYPFDGPGGTLAHAYEPGPGLGGDAHFDEDERWADGRGLGINFLAVATHEL 211
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + SVM Y S + +P DI
Sbjct: 212 GHSLGLRHSSDPD-------------------SVM-Y---PTYGARDSENFKLSP--GDI 246
Query: 189 VAVQKIYG 196
+Q++YG
Sbjct: 247 REIQELYG 254
>gi|118138582|pdb|2J0T|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
Complex With The Inhibitory Domain Of Timp-1
gi|118138583|pdb|2J0T|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
Complex With The Inhibitory Domain Of Timp-1
gi|118138584|pdb|2J0T|C Chain C, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
Complex With The Inhibitory Domain Of Timp-1
Length = 170
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 57/194 (29%), Gaps = 49/194 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 9 RWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTPLTFTKVSEGQADIM 61
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A HE
Sbjct: 62 ISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLHRVAAHE 120
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M +F D
Sbjct: 121 LGHSLGLSHSTDIGA-------------------LM--------YPSYTFSGDVQLAQDD 153
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG +
Sbjct: 154 IDGIQAIYGRSQNP 167
>gi|270017158|gb|EFA13604.1| hypothetical protein TcasGA2_TC010302 [Tribolium castaneum]
Length = 527
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 65/197 (32%), Gaps = 59/197 (29%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------- 85
+ + L + + +E+A+ A +W V L FE S DI +N
Sbjct: 114 NKWSKTNLKWYFSLATNEMKELAQKAFDQWESVSKLKFEFNSNKPDILISFANMPFQHNH 173
Query: 86 ----------NGYVCTPRYDSRYF-------MEINFDKADVWRYG-----IGKGTILSHN 123
N + + F + I+FDK++ W +G T
Sbjct: 174 NSRCQKGVCSNSFDGKGNILAHGFFPNNDECLGIHFDKSENWYFGELGNTPDGQTNFYTV 233
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM-SYFMPQDSMMDASFGYCAT 182
LHEIGH LG+ H + +M +Y+ +
Sbjct: 234 LLHEIGHTLGIEHSANDKA-------------------IMYAYYKGVGDKLTQ------- 267
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ A+Q +YG P+
Sbjct: 268 ---DDVWAIQYLYGIPE 281
>gi|805013|emb|CAA58521.1| MT-MMP [Rattus norvegicus]
Length = 582
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSDIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|226945423|ref|YP_002800496.1| secreted mannuronan C5-epimerase [Azotobacter vinelandii DJ]
gi|226720350|gb|ACO79521.1| Secreted mannuronan C5-epimerase [Azotobacter vinelandii DJ]
Length = 998
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL+ G +D + G + N T+ + E ++G +GND + G + N++
Sbjct: 810 DLSAFTGANLILDERV----VLEGSDGNDTLDGGSAAEELLGGAGNDSLDGGAGNDILDG 865
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+G D G SG D F Y + F N + DF + + +
Sbjct: 866 GAGRDTLTGGSGADVFRY-----DDALDSFRNYGTGVTGTDTITDFTPGEDLIDLS 916
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDL-NTESWSS 252
G N+ Y I+ ++ D ++Y + ++ + L G DL T ++
Sbjct: 327 GNTIVGSANSTYGIQ-ERADGTDYSSLYANSVSNVQSGSVRLYGTNSVVSDLPGTGQQAT 385
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ E+++G G+D + G + N++ +G D G +G D F A
Sbjct: 386 LEGTTGNDTLTGSDAHETLLGLDGDDRLNGGAGNDILDGGAGRDNLTGGAGADLFRVSAR 445
Query: 313 SYLYKIY--RFENAIIVYDANEHKQDF 337
+ Y+ F + I +DA+E D
Sbjct: 446 TDSYRTDSASFNDLITDFDADEDSIDL 472
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 5/122 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + + E+++G +GND + G +++ +G D G +G D F + A
Sbjct: 537 IEGDAGNNALLGTSAAETLLGHAGNDTLDGAGGDDILVGGAGRDTLTGGAGADLFRFDAL 596
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-----QCIDSVNVKQRSILEYTAS 367
S + Y + + + DV L F +V V Y S
Sbjct: 597 SDSQRNYTTGDNQGDRIVDFSVGEDKLDVSALGFTGLGDGYNGTLAVVVNSAGDRTYVKS 656
Query: 368 YE 369
YE
Sbjct: 657 YE 658
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 39/81 (48%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +++G+S + ++G++ N+ + G+D+ G +G DT A + L++
Sbjct: 536 VIEGDAGNNALLGTSAAETLLGHAGNDTLDGAGGDDILVGGAGRDTLTGGAGADLFRFDA 595
Query: 321 FENAIIVYDANEHKQDFLSDV 341
++ Y +++ D + D
Sbjct: 596 LSDSQRNYTTGDNQGDRIVDF 616
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+GND + G +A+ + +G D G +G D F + + Y+ A ++ D
Sbjct: 696 GSAGNDSLQGTAADEIVHGGAGRDTLSGGAGADVFRFSELTDSYRTASTSFADLITD--F 753
Query: 333 HKQDFLSDVERLRFAD-----QCIDSVNVKQRSILEYTASYE 369
D D+ L F+ +V V Y SYE
Sbjct: 754 DLADDRIDLSGLGFSGLGDGYDGTLAVVVNSTGTRTYLKSYE 795
>gi|108805305|ref|YP_645242.1| hemolysin-type calcium-binding region [Rubrobacter xylanophilus DSM
9941]
gi|108766548|gb|ABG05430.1| Hemolysin-type calcium-binding region [Rubrobacter xylanophilus DSM
9941]
Length = 865
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 12/146 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
KG G++ + V + TI G D G + L+ ++ G
Sbjct: 92 KGGAGSDTF---VASTTADGADTIVGGSGKDTASYAARTGAVA-VTLDGKANDGATGEGD 147
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ +E+V SG D + G++ N +GND G G D F + +
Sbjct: 148 NV----GGDVENVTSGSGADRLSGSALGNRLDSGAGNDALSGLDGDDLLFAGYGNDSLR- 202
Query: 319 YRFENAIIVYDANEHKQDFLSDVERL 344
D S+ E
Sbjct: 203 ---GGPGTDRCDPGLGTDTASECEPF 225
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 25/67 (37%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G++G+D + G + +V GNDV G G D A S + +
Sbjct: 54 TISGTAGSDTLTGTARADVICGLGGNDVIKGLGGNDQLKGGAGSDTFVASTTADGADTIV 113
Query: 330 ANEHKQD 336
K
Sbjct: 114 GGSGKDT 120
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 10/137 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---SGLDTFF 308
+I G + T+ + + G GNDV+ G N+ +G+D F S G DT
Sbjct: 54 TISGTAGSDTLTGTARADVICGLGGNDVIKGLGGNDQLKGGAGSDTFVASTTADGADTIV 113
Query: 309 YYAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ A+ V A + DVE + +
Sbjct: 114 GGSGKDTASYAARTGAVAVTLDGKANDGATGEGDNVGGDVENVTSGSGADRLSGSALGNR 173
Query: 362 LEYTASYEDLIQVIGQD 378
L+ A + L + G D
Sbjct: 174 LDSGAGNDALSGLDGDD 190
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 7/164 (4%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI+ +++ G++ DV+ G N+V GND G +G DTF +
Sbjct: 54 TISGTAGSDTLTGTARADVICGLGGNDVIKGLGGNDQLKGGAGSDTFVASTTADGADTIV 113
Query: 321 FENA--IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ Y A D + A D+V ++ + + +G
Sbjct: 114 GGSGKDTASYAARTGAVAVTLDGKANDGATGEGDNVGGDVENVTSGSGADRLSGSALGNR 173
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ + GL +G D+ F Y D LR G+DR
Sbjct: 174 LDSGAGNDALSGL-DGDDLLFAGYG----NDSLRGGPGTDRCDP 212
>gi|49904709|gb|AAH76638.1| Matrix metallopeptidase 14 (membrane-inserted) [Mus musculus]
Length = 582
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 38/127 (29%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD + W G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSVEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|324113059|gb|EGC07035.1| type 1 secretion protein [Escherichia fergusonii B253]
Length = 3782
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + S
Sbjct: 3558 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSVTTAQATG 3611
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y S
Sbjct: 3612 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLSASDAT 3671
Query: 319 YRFENAII 326
+ ++
Sbjct: 3672 GGNGSDVV 3679
>gi|126640800|ref|YP_001083784.1| iron-regulated protein [Acinetobacter baumannii ATCC 17978]
Length = 896
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ +D + G N+ GND +G +G DT + + + +E I ++ +
Sbjct: 574 IIGTKLDDTLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGNAVMTGGDYEKDIYIFQS 633
Query: 331 NEHKQDFLSD-----VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
H QD ++D F D + N L + +I+ G D S K+
Sbjct: 634 G-HGQDIINDKSYDWTNLQYFNDVKFEGANFTDAQFLR--VGNDLVIKAFGTDDSVSFKN 690
Query: 386 FYEFGLSEGRDITF 399
+ S RD F
Sbjct: 691 YLNDNDSYSRDFNF 704
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N ++++GS G+D + G + ++ +GND+ +G G D A
Sbjct: 723 LNGTDGNDVQNGWKGKDNLLGSLGDDTLNGLAGDDWLEGGAGNDILNGGEGNDLLEGGAG 782
Query: 313 SYLYKIYRFENAIIVYDANEHKQD 336
+ + I D
Sbjct: 783 NDTLTGGIGADTAIFKILAGFGND 806
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 27/69 (39%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND++ G N++ +GND G G DT + + N + +
Sbjct: 761 GGAGNDILNGGEGNDLLEGGAGNDTLTGGIGADTAIFKILAGFGNDATGGNGVDTWSDFN 820
Query: 333 HKQDFLSDV 341
Q ++
Sbjct: 821 ISQGDKINI 829
Score = 41.3 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 42/185 (22%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS------------GNDVFD 299
++ G + N T+ + + G +G D +IG S N V G D+ +
Sbjct: 582 TLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGNAVMTGGDYEKDIYIFQSGHGQDIIN 641
Query: 300 GSSG--------LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----------DFLSDV 341
S D F A + R N +++ D S
Sbjct: 642 DKSYDWTNLQYFNDVKFEGANFTDAQFLRVGNDLVIKAFGTDDSVSFKNYLNDNDSYSRD 701
Query: 342 ERLRFADQCIDSVNV----------KQRSILEYTASYEDLIQVIGQDVFESMK--HFYEF 389
FAD+ + + +V + ++L+ +G D + + E
Sbjct: 702 FNFIFADKTLTTADVMNIVIPLNGTDGNDVQNGWKGKDNLLGSLGDDTLNGLAGDDWLEG 761
Query: 390 GLSEG 394
G
Sbjct: 762 GAGND 766
>gi|1658112|gb|AAD13803.1| membane-type 1 metalloproteinase precursor [Oryctolagus cuniculus]
Length = 572
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 40/127 (31%), Gaps = 24/127 (18%)
Query: 53 EVARWALGEWSKVVDLTFEET---------------------SIHSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVHYAYIRDGREKQADIMIFFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYEN 155
D EN
Sbjct: 262 QWMDTEN 268
>gi|300868187|ref|ZP_07112819.1| hypothetical protein OSCI_3590036 [Oscillatoria sp. PCC 6506]
gi|300333811|emb|CBN58003.1| hypothetical protein OSCI_3590036 [Oscillatoria sp. PCC 6506]
Length = 1635
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 7/153 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S TIY G D++D GG N + + G + ++ + +
Sbjct: 1454 NDNLTGSGGTDTIYGDRGADIID----GGDGNDQIFGGKESDKLSGGNGDDFLSGNNDND 1509
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +GND++ G N+V G+D G G D A + + E D
Sbjct: 1510 TLTGGAGNDILRGGKENDVLLGGDGDDELWGDRGFDALTGGAGKDNFVL---EFTATSPD 1566
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ DF S ++++ ++ + +++
Sbjct: 1567 QADVITDFNSTDDKIKLVGFTFSQLSFESVNVI 1599
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 7/125 (5%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ +I + + G SGND + G+ + + G D+ DG G D F S
Sbjct: 1436 DTSIPTSAFGQPIRGLSGNDNLTGSGGTDTIYGDRGADIIDGGDGNDQIFGGKESDKLS- 1494
Query: 319 YRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + D L+ + LR + + L ++ L
Sbjct: 1495 ---GGNGDDFLSGNNDNDTLTGGAGNDILRGGKENDVLLGGDGDDELWGDRGFDALTGGA 1551
Query: 376 GQDVF 380
G+D F
Sbjct: 1552 GKDNF 1556
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 1/107 (0%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ +++ GS G D + G+ ++ GND G D + +N
Sbjct: 1452 SGNDNLTGSGGTDTIYGDRGADIIDGGDGNDQIFGGKESDKLSGGNG-DDFLSGNNDNDT 1510
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ A + + L D + + L A ++ +
Sbjct: 1511 LTGGAGNDILRGGKENDVLLGGDGDDELWGDRGFDALTGGAGKDNFV 1557
>gi|294678675|ref|YP_003579290.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294477495|gb|ADE86883.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 730
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 2/134 (1%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
++I + SGG D D +L GG N + ++ G +
Sbjct: 241 TEADDSIDGLAGNDTLDGLAGADTLSGGAD--DDSLDGGADNDALAGDDGADTLAGGAGD 298
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+A +++ G G D + G + ++ +GND G G D+ A +
Sbjct: 299 DTLAGGAGNDALAGDDGTDSLAGGAGDDTLDGGAGNDALAGDDGTDSLAGSAGNDTLDGG 358
Query: 320 RFENAIIVYDANEH 333
+A+ D +
Sbjct: 359 AGNDALTGGDGTDS 372
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 10/153 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G E + +I +++ G +G D + G + ++ + ND G G DT A
Sbjct: 237 DLQGTEADDSIDGLAGNDTLDGLAGADTLSGGADDDSLDGGADNDALAGDDGADTLAGGA 296
Query: 312 PSYLYKIYRFENAIIVYD-----ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILE 363
+A+ D A D L + + L D L+
Sbjct: 297 GDDTLAGGAGNDALAGDDGTDSLAGGAGDDTLDGGAGNDALAGDDGTDSLAGSAGNDTLD 356
Query: 364 YTASYEDLIQVIGQDVFESMK--HFYEFGLSEG 394
A + L G D + G E
Sbjct: 357 GGAGNDALTGGDGTDSLAGGAGNDTLDGGAGED 389
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 5/133 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G E + I H ++VV +GND V G + GND G + D+ A
Sbjct: 520 TLTGTEADEAIYAHLGADTVVAGAGNDTVSGGYGADSLNGQDGNDSLLGGAQNDSLDGGA 579
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ + + D + D L A + L
Sbjct: 580 GNDSLLGEDGDDRLSDLSGADLLDGGAGDDLVIATDDPT-----STAADTLLGGAGNDTL 634
Query: 372 IQVIGQDVFESMK 384
+ + +
Sbjct: 635 VGDLLDTMTGGAG 647
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 3/106 (2%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + G+ G D + G ++ GND G+ G D + +
Sbjct: 36 IFGDDDANEIEGTDGRDFIDGGHGHDTIDGGLGNDTLRGNLGADELTDFFGANTLHGGYG 95
Query: 322 ENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEY 364
+ + DA D L + + L D Y
Sbjct: 96 YDHLTALDAKGGASDLLDGGGNNDTLLGDDGDTLLGGDGTDYFRAY 141
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 23/88 (26%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I +++ G GND + GN + + G + G G D
Sbjct: 45 IEGTDGRDFIDGGHGHDTIDGGLGNDTLRGNLGADELTDFFGANTLHGGYGYDHLTALDA 104
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ L
Sbjct: 105 KGGASDLLDGGGNNDTLLGDDGDTLLGG 132
>gi|254426292|ref|ZP_05040008.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196187706|gb|EDX82672.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 544
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 14/200 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + P Q ++GG + L I V + + + + + + T+
Sbjct: 319 RFSLDDPTDPVWQISVNTGGLNPFGLAYIPSVHDELYVCGDKDDVLKTAKGQDTVYGGAG 378
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------KIYRF 321
+ + G GND + G + ++ + G+DV G G DT + L +
Sbjct: 379 KDKLWGQGGNDKLFGEADDDYLRGNRGDDVLIGGLGNDTVNGGSGDDLLIGAQVESLTPG 438
Query: 322 ENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSIL-EYTASYEDLIQVIGQDV 379
+ Y + F L D + + D S+ + +L ++T +D++++ G
Sbjct: 439 AGEVDTYKGGKGADTFVLGDALSVHYDDGDPASLGFEDYGLLKDFTLDQQDVVRLHGS-- 496
Query: 380 FESMKHFYEFGLSEGRDITF 399
YE G +G F
Sbjct: 497 ----ADRYELGSVQGDTFIF 512
>gi|92112190|ref|YP_572118.1| putative hemagglutinin/hemolysin-related protein [Chromohalobacter
salexigens DSM 3043]
gi|91795280|gb|ABE57419.1| putative hemagglutinin/hemolysin-related protein [Chromohalobacter
salexigens DSM 3043]
Length = 3314
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 1/119 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ T + + G GND + G N++ +G+D +G +G D
Sbjct: 3122 VEGTSANETLDGGTGSQRLYGYEGNDTLNGGDGNDLLRGGAGDDTLNGGAGNDLLIDGNG 3181
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ I+ D + L D ID V L DL
Sbjct: 3182 ADTFNAGAGDDLIVTSGNGFTSIDGSDGFDTLLL-DGGIDLDMVNGGLGLVTNIERLDL 3239
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + + +++ G GND++ G + N+ +GND+ G +G DT +
Sbjct: 2715 TLDGTADNDRLYGYGGNDTLNGGEGNDLLRGGAGNDTLNGGTGNDILIGGTGDDTLAGGS 2774
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ +++ + I AN+ DF S
Sbjct: 2775 GNDVFRWEQGHQGTIGTPANDTITDFNS 2802
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY N T+ + + G +GND + G + N++ +G+D G SG D F +
Sbjct: 2725 LYGYGGNDTLNGGEGNDLLRGGAGNDTLNGGTGNDILIGGTGDDTLAGGSGNDVFRWEQG 2784
Query: 313 SYLYKIYRFENAIIVYDANE 332
+ I +++
Sbjct: 2785 HQGTIGTPANDTITDFNSAR 2804
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + +++ G GND++ G + ++ +GND+ +G DTF A
Sbjct: 3130 TLDGGTGSQRLYGYEGNDTLNGGDGNDLLRGGAGDDTLNGGAGNDLLIDGNGADTFNAGA 3189
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
L I N D ++ L D
Sbjct: 3190 GDDL--IVTSGNGFTSIDGSDGFDTLLLD 3216
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I + E++ G++ ND + G N+ GND+ G +G DT + +
Sbjct: 2704 DYLIQGTSAAETLDGTADNDRLYGYGGNDTLNGGEGNDLLRGGAGNDTLNGGTGNDILIG 2763
Query: 319 YRFENAIIVYDANE 332
++ + N+
Sbjct: 2764 GTGDDTLAGGSGND 2777
>gi|326932338|ref|XP_003212276.1| PREDICTED: matrix metalloproteinase-23-like [Meleagris gallopavo]
Length = 400
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 32/146 (21%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIK 80
W ++ + YK + ++ T + +A A WS+V +F E H+ D+K
Sbjct: 98 WDHFNLTYKILSFPRNLINARDT-----RKGLA-AAFQMWSEVSPFSFREVPRHAPSDLK 151
Query: 81 FISSNNGYV-------------CTPRYDSRYFM---EINFDKADVWRYGIGK-------- 116
+ + T +F EI+FD + W G +
Sbjct: 152 IGFYSINHTDCLESLIHHCFDGTTGELAHAFFPPNGEIHFDDHEYWILGNTRFSWKKGVW 211
Query: 117 GTILSHNALHEIGHALGLMHPGSYNG 142
T L H A HEIGHALGLMH + N
Sbjct: 212 LTDLVHVAAHEIGHALGLMHSQNPNA 237
>gi|254454104|ref|ZP_05067541.1| hypothetical protein OA238_4730 [Octadecabacter antarcticus 238]
gi|198268510|gb|EDY92780.1| hypothetical protein OA238_4730 [Octadecabacter antarcticus 238]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 7/144 (4%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+I + G D L + TL GG + + G N + +++ G
Sbjct: 25 DSIDGTQGTDNLSGGLGNDTLYGGGGGDQLNGGLGFDDMYGGSGNDVMVGLNGFDTLYGG 84
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D + GNS N+ F +GND+ +G G D S I A I+Y +
Sbjct: 85 SGDDNLKGNSGNDTLFGGNGNDILNGGQGADVMHGDGDSD--TITGLGGADILYGGDGDD 142
Query: 335 QDFLSDVERLRFADQCIDSVNVKQ 358
+ L + D D + Q
Sbjct: 143 NLSGNAANDLIYGDAGNDIIEGGQ 166
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 204 NNIYKIEVQQKDS--PFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+++Y T+Y GDD L + TL GG N I LN + +
Sbjct: 61 DDMYGGSGNDVMVGLNGFDTLYGGSGDDNLKGNSGNDTLFGGNGNDI-LNGGQGADVMHG 119
Query: 257 EKN-MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + TI + + G G+D + GN+AN++ + +GND+ +G
Sbjct: 120 DGDSDTITGLGGADILYGGDGDDNLSGNAANDLIYGDAGNDIIEGG 165
Score = 44.3 bits (103), Expect = 0.074, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 12/151 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------NVFFESSGNDVFDGSS 302
++ G +I +++ G GND + G + + SGNDV G +
Sbjct: 17 TVAGVGSCDSIDGTQGTDNLSGGLGNDTLYGGGGGDQLNGGLGFDDMYGGSGNDVMVGLN 76
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + + K N + + + + + IL
Sbjct: 77 GFDTLYGGSGDDNLK-GNSGNDTLFGGNGNDILNGGQGADVMHGDGDSDTITGLGGADIL 135
Query: 363 EYTASYEDLIQVIGQDVF--ESMKHFYEFGL 391
++L D+ ++ E G
Sbjct: 136 YGGDGDDNLSGNAANDLIYGDAGNDIIEGGQ 166
Score = 44.0 bits (102), Expect = 0.088, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 59/168 (35%), Gaps = 45/168 (26%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG------ 255
+ +Y + T++ G+D+L+ G + D ++++ + +GG
Sbjct: 79 DTLYGGSGDDNLKGNSGNDTLFGGNGNDILNG-GQGADVMHGDGDSDTITGLGGADILYG 137
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGN-------------------------------- 283
+ + ++ + + + G +GND++ G
Sbjct: 138 GDGDDNLSGNAANDLIYGDAGNDIIEGGQGADDLFGGDGDDVISGSVGFDTLYGGDGDDD 197
Query: 284 ----SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ N+ G+D+ G +G DTF + A I F N++
Sbjct: 198 LNGNAGNDFINGGLGDDLLRGGTGADTFEFLAGDGRDTIRDFGNSVDT 245
>gi|262092796|gb|ACY25772.1| alkaline metalloprotease [uncultured bacterium]
Length = 64
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + ++D GG D LD + +DLN ES+S +GG + N++IA
Sbjct: 11 MSLTSARDKPVFCVWDGGGVDTLDFSGFS-QDQKVDLNAESFSDVGGLKGNVSIA 64
>gi|255263402|ref|ZP_05342744.1| poly(beta-D-mannuronate) C5 epimerase 7 [Thalassiobium sp. R2A62]
gi|255105737|gb|EET48411.1| poly(beta-D-mannuronate) C5 epimerase 7 [Thalassiobium sp. R2A62]
Length = 968
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 41/109 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
IGG N TI + + V G+ GND + G+ ++V SGND DG +G D F +
Sbjct: 210 IGGDTWNDTINGGSGNDFVFGNQGNDELNGDEGDDVIEGGSGNDTMDGGTGDDLFTFEGG 269
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + + + + + +D+ +
Sbjct: 270 FGVDTVDGGADNDTLDLSQVQADMTVGGTNIWGTSDRSATDDAGNTVTF 318
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 1/130 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ N + + + + + V+G SG+D ++G S ++
Sbjct: 551 NFETYAFSSNRANPVNNQYVDATATSVGLMLDTANGNDIVLGGSGDDTILGGSGDDALNG 610
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQC 350
+GN+V DG G+DT Y F I + + S+ ERL F +
Sbjct: 611 GAGNNVIDGGEGVDTIELAGSVANYTFETFSHIRIDDTETGLGGNNKASNFERLAFDEGE 670
Query: 351 IDSVNVKQRS 360
+
Sbjct: 671 FAWQRGNNAN 680
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L ++ ++ N + + + G+ G+D + G + ++ +GN+V DG G+
Sbjct: 711 LIGDNGANFTWKNGNDVLNGGAGNDLLFGNGGDDALNGGAGDDALNGGAGNNVIDGGEGV 770
Query: 305 DTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
DT Y F I + + S+ ERL F + +
Sbjct: 771 DTIELAGSVANYTFETFSHIRIDDTETGLGGNNKASNFERLAFDEGEFAWQRGNNAN 827
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEK 258
+ + + K S F + +D G + G +L S + G
Sbjct: 791 RIDDTETGLGGNNKASNFERLAFDEG-----EFAWQRGNNANNNLTASDDSGAIMVGLHG 845
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ T+ + ++G +G + N N+V +GND+ G+ G DTF + I
Sbjct: 846 SDTMTGGDGDDVLIGDNGANFTWKN-GNDVLNGGAGNDLLFGNGGDDTFVFEDGFGHDII 904
Query: 319 YRFENAIIVYDA 330
FE+ + V +
Sbjct: 905 GDFEHGVDVINV 916
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 6/157 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ TI G D + GGV + + +N S + + + T+ + + G
Sbjct: 159 GNSGADTINAGAGQDFVK----GGVGSDL-INGGDGSDYLVGDHSDSNEYQTLADRIGGD 213
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-H 333
+ ND + G S N+ F + GND +G G D + + ++
Sbjct: 214 TWNDTINGGSGNDFVFGNQGNDELNGDEGDDVIEGGSGNDTMDGGTGDDLFTFEGGFGVD 273
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
D +D + L + D S D
Sbjct: 274 TVDGGADNDTLDLSQVQADMTVGGTNIWGTSDRSATD 310
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G G+DV+IG++ N F +GNDV +G +G D F ++A +
Sbjct: 700 DTMTGGDGDDVLIGDNGAN-FTWKNGNDVLNGGAGNDLLFGNGGDDALNGGAGDDA-LNG 757
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
A + D V+ + A + I
Sbjct: 758 GAGNNVIDGGEGVDTIELAGSVANYTFETFSHIR 791
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 13/164 (7%)
Query: 224 DSGGDDLLDLT---LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D+ G D + G +N D++++ I G N I + + G+SG D +
Sbjct: 109 DADG--TFDYSVELGNRGQQNMGDISSQVTQIITGGGGNDIIDGGAGDDIIAGNSGADTI 166
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL--YKIYRFENAIIVYDANEHKQDFL 338
+ + G+D+ +G G D + D
Sbjct: 167 NAGAGQDFVKGGVGSDLINGGDGSDYLVGDHSDSNEYQTLADRIGGDTWNDTINGGSG-- 224
Query: 339 SDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFE 381
F +Q D +N + ++E + + + G D+F
Sbjct: 225 ---NDFVFGNQGNDELNGDEGDDVIEGGSGNDTMDGGTGDDLFT 265
>gi|220924742|ref|YP_002500044.1| hypothetical protein Mnod_4882 [Methylobacterium nodulans ORS 2060]
gi|219949349|gb|ACL59741.1| hypothetical protein Mnod_4882 [Methylobacterium nodulans ORS 2060]
Length = 235
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 66/208 (31%), Gaps = 36/208 (17%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D Y D+ G D H+ +G +EGR P+ F Y + A
Sbjct: 42 DVNYYFMEGQDVLKA-GVD---PVEHFCRYGWREGRRPNLCFDPCWYRGRY------LAG 91
Query: 459 APDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
PD+ + H+ G G F+ Y Y D G +HY+ H
Sbjct: 92 RPDVNPLA--HYIAIGEAAGFRPIAYFNPAWYRQIY-----AIPPDCG-CLKHYLDHRRS 143
Query: 517 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE--EGRSITFNPDLYL 573
+ P+A F Y+ H I A D H G S F+ Y
Sbjct: 144 QRFAPNALFDIRFYLDRHGHEIGANRDP-------FAHLLRLGATRDLDPSRVFDSAAYR 196
Query: 574 TSY-----DDLWNVFGSDRSAAAQHYIT 596
+ + ++ G +R H++
Sbjct: 197 AQFMGAVDAEPIDLSGHERKVPLVHFLD 224
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 62/190 (32%), Gaps = 28/190 (14%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
+ Y +D+++ + ++HF +G EGR FD Y G Y R
Sbjct: 38 SGLVDVNYYFMEGQDVLKA----GVDPVEHFCRYGWREGRRPNLCFDPCWYRGRYLAGRP 93
Query: 414 VFGSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
HYI G G R F Y + A PD H+ +
Sbjct: 94 DV-----NPLAHYIAIGEAAGFRPIAYFNPAWYRQIY-------AIPPDC--GCLKHYLD 139
Query: 473 FGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEY 529
+ FD YL + + G++R A H + G +P F + Y
Sbjct: 140 HRRSQRFAPNALFDIRFYLDRHG---HEIGANRDPFA-HLLRLGATRDLDPSRVFDSAAY 195
Query: 530 IASHEDLINA 539
A ++A
Sbjct: 196 RAQFMGAVDA 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 39/121 (32%), Gaps = 17/121 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R Y +D++ A D +HF +G+ EGR F+P Y Y
Sbjct: 36 RESGLVDVNYYFMEGQDVLKAGVDP-------VEHFCRYGWREGRRPNLCFDPCWYRGRY 88
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEG-RALGISGMQFKSVMNLSEKSRDKADLSLSFDHK 635
+ G HYI G G R + + + D L DH+
Sbjct: 89 -----LAGRPDVNPLAHYIAIGEAAGFRPIAYFNPAW--YRQIYAIPPDCGCLKHYLDHR 141
Query: 636 K 636
+
Sbjct: 142 R 142
>gi|83645367|ref|YP_433802.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83633410|gb|ABC29377.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 3483
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 10/183 (5%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ Q + S D++ G + N +D N + + E + + +
Sbjct: 2175 TWDFTALMAQAVVGSADADVIQGFSNGEIINTLDGNDK----VRAGEGDDEVDGGAGDDE 2230
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G G D++ G + +G D G G DT F + S + + D
Sbjct: 2231 LYGEGGADLLKGGLGADRLDGGAGEDRLFGGDGNDTLFGGSGSDELSGEVGADTLHGGDG 2290
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L + E +D + S +L + + L G D + + G
Sbjct: 2291 QDQLSGGLGNDELFGDSDADVLSGGEGN-DMLHGGSGDDVLNGDAGDDK-----LYGDGG 2344
Query: 391 LSE 393
E
Sbjct: 2345 QDE 2347
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T++D + LLD+ LIGG + ++ GY + ++ ++++G+ G D +
Sbjct: 2013 TVWDK--ETLLDMALIGGDGDE---------TLIGYSTDDILSGAGGADTLLGNDGADSL 2061
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + + +GNDV G +G D LY+ R + ++ DAN + +D
Sbjct: 2062 SGGAGADDLQGGAGNDVLAGDAGDDKLAGGLGDDLYRFSRGDGKDVITDANGTDRIEFTD 2121
Query: 341 V 341
V
Sbjct: 2122 V 2122
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 244 DLNTESWSSIGGYEKNMT-------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
DL T + + + N + I + + G+ G+DV+ G ++ G+D
Sbjct: 1149 DLLTGALQDVSIWNNNYSGSEGHSYIIGSAGADRLNGNGGDDVLEGREGSDTLTGGKGSD 1208
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
G G D Y+ + ++ ++N +D + + +D
Sbjct: 1209 RIVGGVGDDNLQGGEGDDRYEFSAGDGRDVINNSNAAGEDRIYLDASIAQSD 1260
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 38/105 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + + G GND ++G + N+ G+D +G G DT
Sbjct: 1873 IYGDLNDNRIDGLQGNDLLNGDRGNDELLGGAGNDQLLGGHGDDTLNGGVGDDTLTGGEG 1932
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ Y + ++ + + D + + AD + +
Sbjct: 1933 ADTYLFSLGDGKDVINNNDSSGVDAVVFDASVASADVRVSRTSNN 1977
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 51/170 (30%), Gaps = 17/170 (10%)
Query: 241 NYIDLNT-----ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
Y DLN + G + N I ++ + G G+D + G ++ G+
Sbjct: 2545 GYRDLNDEIHAGGGDDKVWGRQGNDAIYGDAGVDYLDGDEGDDRLFGGEGDDNLVGRIGD 2604
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D +G G D+ + + D L AD+
Sbjct: 2605 DYLEGGLGDDSLQGNEGAD----ELYGQDGEDSLFGGAGDDLLDGG-----ADKDYFEAG 2655
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDITFDSYL 403
+ A + L G D + Y +G +G D+ F+
Sbjct: 2656 AGNDKVF-GGAGNDQLSGDAGDDELTGGEGDDKYVYGPGDGHDVIFNGDG 2704
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N I + + G D + G+ ++V G+D DG +G DTF +
Sbjct: 1518 NLTGLAGNDVIRGQKGNDVIDAGDGADKLYGDEGDDVLTGGKGDDSLDGGAGSDTFHFNL 1577
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I ++ + + D
Sbjct: 1578 GDGADTIIDRNHSGSDINTLQFGPGISKD 1606
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 18/154 (11%)
Query: 222 IYDSGGDDLL-------DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVG 273
++ G+D L +L+ G L+ + G N + + + + G
Sbjct: 2258 LFGGDGNDTLFGGSGSDELSGEVGADT---LHGGDGQDQLSGGLGNDELFGDSDADVLSG 2314
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND++ G S ++V +G+D G G D + A E
Sbjct: 2315 GEGNDMLHGGSGDDVLNGDAGDDKLYGDGGQDELYGGAGKD-------ELYGSGQLFGGE 2367
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+D L L D + ++L
Sbjct: 2368 GEDLLEGQGTLDGGDGNDELRGQGSDTLLGGAGD 2401
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T ++ G G+D + GN+ N+ G D +G G DT Y ++
Sbjct: 606 SGTGNDTYSGGEGDDYLFGNAGNDSLSGGEGIDYLEGGDGSDTLEGGEGFDTY---VSDS 662
Query: 324 AIIVYDANEHKQDFLSD 340
+ + D++ L D
Sbjct: 663 SDTLKDSDGKGTVKLED 679
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D +D L G N S+ G T++ +S+ G G+D + G
Sbjct: 1329 GYDAVDDNLKGLSGND---------SLYGQAGADTLSGDAGADSLSGGDGDDKLYGGEGL 1379
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ G+DV G D + A +Y+I A D +S+
Sbjct: 1380 DTLSGDKGDDVLVGGKDNDRLYGGAGKDIYQI-----------AKGDGHDTISEEYSETV 1428
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
D+ + + + + ++ L+ + + +++ S G + F
Sbjct: 1429 VDRVVFGAGILAENTVLLRRGWDLLVSIDEGAQTVRINNYFNKDASTGYALEF 1481
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 4/137 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + + + +GND V G + N+ +G+D G G D + Y
Sbjct: 2633 SLFGGAGDDLLDGGADKDYFEAGAGNDKVFGGAGNDQLSGDAGDDELTGGEGDDKYVYGP 2692
Query: 312 PSYLYKIYRFENAII----VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
I+ + V NE + F D + L A + +V+ + +
Sbjct: 2693 GDGHDVIFNGDGGFDGVLFVGGLNESRLTFSRDGDDLLIAIDDGVNDSVRVKDHFKGGDF 2752
Query: 368 YEDLIQVIGQDVFESMK 384
D +Q G + +
Sbjct: 2753 AIDWVQPDGSSMINTAN 2769
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 21/139 (15%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+TIA+ + + GSS D++ G + ++ G+D G +G DT+ + A
Sbjct: 3315 GTVTIAE-AGADVIFGSSDGDLIDGGAGDDHLTGGRGDDYLIGGAGNDTYHFAAGDGRDT 3373
Query: 318 IYRFENAIIV----------------YDANEHKQDFLSDVERLR----FADQCIDSVNVK 357
I + A D + D L +++R FAD V+
Sbjct: 3374 INDYAGAGEDQLQFAAGVDEQNLWFSRDGEDLVMDLLGSQDQVRVQSWFADNSQQLEMVR 3433
Query: 358 QRSILEYTASYEDLIQVIG 376
+ E L+ +
Sbjct: 3434 TDDAVIDAGRIEQLVSAMA 3452
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 54/192 (28%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL---------TLIGGVKNYIDLNTESW 250
G G+++Y T GG D L + + +++ LN
Sbjct: 3199 GGRGDDVYVFNAGGGKDVIDNT---GGGFDTLRFEGISFGQVSSGLQRNGDHLTLNVSGG 3255
Query: 251 SSIGGYEKNMTIAQHTV--IESVVGS---------------------------------- 274
S + H + IE G
Sbjct: 3256 SDSVTLKNFFKGGDHAIDRIEFASGGQITGDQIFGVFGMSNPDSDGSPNYSGLPDERGFG 3315
Query: 275 ------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+G DV+ G+S ++ +G+D G G D A + Y + +
Sbjct: 3316 TVTIAEAGADVIFGSSDGDLIDGGAGDDHLTGGRGDDYLIGGAGNDTYHFAAGDGRDTIN 3375
Query: 329 DANEHKQDFLSD 340
D +D L
Sbjct: 3376 DYAGAGEDQLQF 3387
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 31/211 (14%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDS---GGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G+ G I ++ +T+ D GGD D TLIG + I ++
Sbjct: 1996 NEGTTGYAIDEVRFADGTVWDKETLLDMALIGGD--GDETLIGYSTDDILSGAGGADTLL 2053
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTF----- 307
G + +++ + + G +GNDV+ G++ ++ G+D+ F G D
Sbjct: 2054 GNDGADSLSGGAGADDLQGGAGNDVLAGDAGDDKLAGGLGDDLYRFSRGDGKDVITDANG 2113
Query: 308 -----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-------------VERLRFADQ 349
F S ++ R +++ Q ++ VE + F+D
Sbjct: 2114 TDRIEFTDVASTAVRVRREGGNLVISVPGSDDQVTITGQYLGEQLTPAASSVESVTFSDG 2173
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +A D+IQ
Sbjct: 2174 VTWDFTALMAQAVVGSAD-ADVIQGFSNGEI 2203
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYRFE 322
+ + GS +D +IG S ++ +G+D+ G G D + Y + RF
Sbjct: 3025 DVINGSDADDTLIGGSGDDTLSGGAGDDLLLGGVGDDVYVYTGGQDVLRDAAGVDTLRFG 3084
Query: 323 NAIIVYDANEHKQ 335
I +
Sbjct: 3085 GGITFGQVSSGLT 3097
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 10/158 (6%)
Query: 187 DIVAVQKIYGAPKG-----SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK- 240
DI +Q G K G+++ +D + +++ G L+ I
Sbjct: 1593 DINTLQFGPGISKDDFWVRRSGDSLVLFHKNMQDRVTVSRYFENDGLGEYALSHIRFDDG 1652
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ +DL+ +I + + TI + + + G GNDV+ G +++ G D G
Sbjct: 1653 SELDLDELKKRAIQPTDDSDTIYGFSTNDVLNGLKGNDVLYGKDGDDIILGQEGEDRLYG 1712
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+G D + A + D L
Sbjct: 1713 ENGQDELQGGLGEDSL----YGGADNDRLFGQEGNDTL 1746
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 19/181 (10%)
Query: 218 FIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
IY G D LD L GG + + + G + ++ + + +
Sbjct: 2567 GNDAIYGDAGVDYLDGDEGDDRLFGGEGDDNLVGRIGDDYLEGGLGDDSLQGNEGADELY 2626
Query: 273 GSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G G D + G + +++ +GND G +G D A ++
Sbjct: 2627 GQDGEDSLFGGAGDDLLDGGADKDYFEAGAGNDKVFGGAGNDQLSGDAGDDELTGGEGDD 2686
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D + + + + V S L ++ +DL+ I V +S+
Sbjct: 2687 KYVY--GPGDGHDVIFNGD---GGFDGVLFVGGLNESRLTFSRDGDDLLIAIDDGVNDSV 2741
Query: 384 K 384
+
Sbjct: 2742 R 2742
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 12/85 (14%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGS------------SGNDVVIGNSANNVFFESSGNDVFD 299
+GG + IE G SGNDV+IG N+V G+D+
Sbjct: 2812 GLGGGDTIFAFGGDDRIEGGDGGDHLYGGNGSGVGSGNDVIIGGDGNDVLVGEDGDDLLF 2871
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENA 324
G +G D ++Y A + I
Sbjct: 2872 GGAGDDHYYYKAGQGVDVIDASGGG 2896
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 1/121 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N T + + + G++GND + G + G+D +G G DT+ +
Sbjct: 604 YFSGTGNDTYSGGEGDDYLFGNAGNDSLSGGEGIDYLEGGDGSDTLEGGEGFDTYVSDSS 663
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDL 371
L + D E + + D + + D
Sbjct: 664 DTLKDSDGKGTVKLEDTTLVGGTRKEDDPENIYKSKDGRFTYELNGSVLTINGGLTINDF 723
Query: 372 I 372
Sbjct: 724 S 724
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 10/183 (5%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ IY +Y GDD++ +G + G
Sbjct: 1668 TDDSDTIYGFSTNDVLNGLKGNDVLYGKDGDDII----LGQEGEDRLYGENGQDELQGGL 1723
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++ + + G GND + G ++ G+D +G +G D +++
Sbjct: 1724 GEDSLYGGADNDRLFGQEGNDTLYGGDGDDDLIGGVGDDHLEGGAGDDNYYFTKGDGKDS 1783
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
IY I +Y + D + R D + + +I +Y Y D + G+
Sbjct: 1784 IYDNNGKITIYVSEIELDDVIFR-RNGRHLDVLFKQTDTDKITIRDY---YPDFGGIAGR 1839
Query: 378 DVF 380
+
Sbjct: 1840 SIG 1842
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 8/172 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE----KNMTIAQHTVIESVVGS--SGND 278
GG L +GG ++ E+ I + ++I +V + V +G+
Sbjct: 3109 GGGQVTLTDFFLGGDALVENIEFETGGQISAQQIFGVFGLSIPAASVYDQTVDGTQNGDS 3168
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ ++ +GND +G G D +Y ++ D D L
Sbjct: 3169 ALTAGDGRDLVRGFNGNDTLNGGKGDDLLIGGRGDDVYVFNAGGGKDVI-DNTGGGFDTL 3227
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
E + F L + + + + EF
Sbjct: 3228 R-FEGISFGQVSSGLQRNGDHLTLNVSGGSDSVTLKNFFKGGDHAIDRIEFA 3278
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 6/126 (4%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY---- 328
G D+V G + N+ G+D+ G G D + + A I
Sbjct: 3172 AGDGRDLVRGFNGNDTLNGGKGDDLLIGGRGDDVYVFNAGGGKDVIDNTGGGFDTLRFEG 3231
Query: 329 -DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + L +V ++ + D I+ + F
Sbjct: 3232 ISFGQVSSGLQRNGDHLTLNVSGGSD-SVTLKNFFKGGDHAIDRIEFASGGQITGDQIFG 3290
Query: 388 EFGLSE 393
FG+S
Sbjct: 3291 VFGMSN 3296
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGND------------VFDGSSGLD-TFFYY 310
+ V G +GND + G++ ++ G+D +F+G G D F
Sbjct: 2654 AGAGNDKVFGGAGNDQLSGDAGDDELTGGEGDDKYVYGPGDGHDVIFNGDGGFDGVLFVG 2713
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + ++ ++ D + + + D ID V S++ +
Sbjct: 2714 GLNESRLTFSRDGDDLLIAIDDGVNDSVRVKDHFKGGDFAIDWVQPDGSSMINTANINKL 2773
Query: 371 LIQVIGQDVFE 381
D
Sbjct: 2774 AAGGDPDDGGS 2784
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 27/82 (32%), Gaps = 7/82 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRF 321
+ + G ++ + G N++ GND G +G D +
Sbjct: 1871 DVIYGDLNDNRIDGLQGNDLLNGDRGNDELLGGAGNDQLLGGHGDDTLNGGVGDDTLTGG 1930
Query: 322 ENAIIVYDANEHKQDFLSDVER 343
E A + +D +++ +
Sbjct: 1931 EGADTYLFSLGDGKDVINNNDS 1952
Score = 40.9 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 24/180 (13%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNM-TIAQHTVI-ESVVGSSGNDVVIGNSANNVF 289
D + + N L GG + + T E + G++G +++ G +
Sbjct: 2760 DGSSMINTANINKLAAGGDPDDGGSNGEYDNVMEGTEAGEQIAGTNGKNLIRGLGGGDTI 2819
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIVYDANEHKQDFL--------- 338
F G+D +G G D + S + E D L
Sbjct: 2820 FAFGGDDRIEGGDGGDHLYGGNGSGVGSGNDVIIGGDGNDVLVGEDGDDLLFGGAGDDHY 2879
Query: 339 -----SDVERLRFADQCID---SVNVKQRSILEYTASYEDLIQVIGQDVFESMK---HFY 387
V+ + + D ++ RS L Y +DL+ ++ D+ + ++ HF
Sbjct: 2880 YYKAGQGVDVIDASGGGSDWVFFLDGLNRSRLSYHQDGDDLVILVDGDLAQQVRVKDHFL 2939
>gi|78186267|ref|YP_374310.1| VCBS [Chlorobium luteolum DSM 273]
gi|78166169|gb|ABB23267.1| VCBS protein [Chlorobium luteolum DSM 273]
Length = 7284
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 87/259 (33%), Gaps = 29/259 (11%)
Query: 196 GAPKGSLGNNI------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G + GN Y ++ + D G LD+T + +D ++
Sbjct: 3302 GEAITNDGNTAMESASNYVVDGTTATGDTVVFQQDDYGL-TLDMTSGSTLALDLDSDSTY 3360
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSS------------------GNDVVIGNSANNVFFE 291
+ + G T+ T IE++ G++ G DV+ G + N+ +
Sbjct: 3361 TTYVVGELGEGTVYISTAIENITGTAQGDSITGSADANVLSGLEGMDVLSGGAGNDTIYG 3420
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+ +D+ G G D + + + + + ++ A + ++ F
Sbjct: 3421 GADDDLIYGGDGNDILYSGSATLTDSVQGVGDDVLYGGAGDDTYKVGEVADQNYFVGGDG 3480
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ V R+I Y + DL + ++ + L+ + GS +
Sbjct: 3481 EDTAVFSRTIGSYYINRADLRFLTDVNLTSGTEDAIWGVLNNDESSLSAT----GSETAV 3536
Query: 412 RNVFGSDRGAAARHYITHG 430
F SD+ Y+ +G
Sbjct: 3537 DVDFASDQPIFQVEYVVNG 3555
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 65/206 (31%), Gaps = 30/206 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTL--IGGVKNYIDLNTESWSSIGGY 256
G G++IY + + D G G D + +L + L + G+
Sbjct: 2641 GDAGDDIYIVTGAND-----FVLEDQGEGIDEVRTSLGTYTLTDDVDILRYTGTTVNAGF 2695
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP---- 312
+ + + G + ND + G + ++V + +G D G G DT
Sbjct: 2696 TG----TGNELANRIYGGAYNDTLTGGAGDDVLWGGAGADTLSGGIGNDTIIIGTDRIAV 2751
Query: 313 ---SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-----------ADQCIDSVNVKQ 358
+ Y N V D D + ++ L+F + K
Sbjct: 2752 AYYNGAYTTTASANTDPVDDYAGDSVDGGAGIDTLQFQGTANNQNLIISSTTTGIEVFKV 2811
Query: 359 RSILEYTASYEDLIQVIGQDVFESMK 384
+I YT+ DL D ++
Sbjct: 2812 VNIPGYTSYALDLDASALSDDSDNFA 2837
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G N T++ +S+V SGND + G + + GNDV G +G D+
Sbjct: 2092 NTLTGTSLNDTLSGGDGDDSLVAGSGNDTLSGGAGADTLDAGLGNDVLAGGTGADSLLGG 2151
Query: 311 APSYLYKIYRFENAII 326
++ F +A
Sbjct: 2152 DGDDVFAYSAFSDATS 2167
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 5/130 (3%)
Query: 234 TLIGGVKNYIDLNTESWSS----IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
T G N ID N S ++ I G + T +++ G G+D + G +++
Sbjct: 6690 TAEGLGLNGIDANLTSLATGDIYITGTDAANTFLLGGGDDTIYGYGGDDYLRGGDGDDII 6749
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ G+D G G D + + + D + + + D
Sbjct: 6750 YAGMGDDTIYGGDGDDFLVGGSGRDGSDFISGGDGVDTACFYYSTYDTAA-ARYVLYLDS 6808
Query: 350 CIDSVNVKQR 359
+ ++
Sbjct: 6809 DGNMLSSNLD 6818
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 47/131 (35%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL G + + L E + G N I + + G +G+DV++G + ++ F
Sbjct: 2880 TLKGSAYSDVILGGEGADGLYGQGGNDYIFGEGGNDQIFGGAGDDVIVGGTGDDRAFGDL 2939
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D+F G +G D F S + + + +LS R +
Sbjct: 2940 GSDIFIGGAGNDYFSGSKASEYVDSSPVDTGVDKAVVAADAKIYLSGDARFEATASVTVT 2999
Query: 354 VNVKQRSILEY 364
N E
Sbjct: 3000 SNADGTDTYEG 3010
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 252 SIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G + + I T I + G SG+D + SGND+ G D
Sbjct: 7062 TINGLDGDDVIRISETSTKIHYLYGGSGDDFLSAGQGTEWLDGGSGNDILVSLGGDDRML 7121
Query: 309 YYAPSY--LYKIYRFENAIIVYDANEHKQDFL 338
+ + Y +A V D + + +
Sbjct: 7122 GGSGDDLIVLATYNDGDAGSVLDPSGDGRTLI 7153
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
V+GS D +IG +V F +G+D G G+DT Y I
Sbjct: 3634 VLGSLKADTIIGGDGADVVFGLAGDDKITGGLGVDTLDGGIGEDNYYIT 3682
Score = 37.8 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 68/215 (31%), Gaps = 39/215 (18%)
Query: 203 GNNIYKIEVQQKDSP------FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G++++ + +I G D + ++ G + SS G
Sbjct: 2153 GDDVFAYSAFSDATSSAIDEVTGDSISGGAGTDTILISTQGAYDFR------TISSAMGI 2206
Query: 257 EKNMTIAQH----TVIESVVGSSG-------------------NDVVIGNSANNVFFESS 293
EK + A +I++ + +G + + N +E
Sbjct: 2207 EKLVIDAGTATPTVIIDNKLVGAGEVLNVSSASADGTVNVILHATSLTQGTINITGYEFG 2266
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRF---ADQ 349
N F+G +G+DT YY Y + + ++ + D L +E + F A
Sbjct: 2267 DNSEFNGGTGIDTITYYGSVSDYSFSGSPDTYVKIVSDTYGVDHTLRGIEVINFVTEAAP 2326
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+++ + Y A + + D+
Sbjct: 2327 TTVTMSARLIGAGGYAALSDAIAVASTGDLIMMAA 2361
>gi|50122188|ref|YP_051355.1| putative hemagglutinin/hemolysin-related protein [Pectobacterium
atrosepticum SCRI1043]
gi|49612714|emb|CAG76164.1| putative hemagglutinin/hemolysin-related protein [Pectobacterium
atrosepticum SCRI1043]
Length = 4558
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
NYI+ ++ + N + + + G GND + G + N++ + SG+D+
Sbjct: 4386 HNYIESHSAEFDLSSAKGGNDILNGGDGDDILFGQGGNDTLYGGAGNDLLYGGSGDDILI 4445
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
G +G DT A + +K + ++ D N + D +
Sbjct: 4446 GGAGSDTLIGGAGADTFKWQAGDIGNDVIKDFNAKEGDRI 4485
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG+D+L+ GG + I ++ G N + + + ++G +G+D +IG +
Sbjct: 4402 KGGNDILN----GGDGDDILFGQGGNDTLYGGAGNDLLYGGSGDDILIGGAGSDTLIGGA 4457
Query: 285 ANNVFF---ESSGNDVF 298
+ F GNDV
Sbjct: 4458 GADTFKWQAGDIGNDVI 4474
>gi|300693942|ref|YP_003749915.1| glycosyltransferase domain [Ralstonia solanacearum PSI07]
gi|299075979|emb|CBJ35291.1| hypothethical protein, Glycosyltransferase domain [Ralstonia
solanacearum PSI07]
Length = 610
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 13/91 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y D+ HY+ G E R F A Y + D++ +
Sbjct: 113 FDPDFYRRLNPDIAR-----LADPLEHYLQIGGFEWRRAHPRFDAQWYAGRYGDVLTSGL 167
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
H+ G +EGR + L+
Sbjct: 168 HP-------LVHYILIGRQEGRSAVPPARLF 191
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 33/106 (31%), Gaps = 14/106 (13%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYD 577
F Y + D I AD +H+ G E R F+ Y Y
Sbjct: 109 ESGLFDPDFYRRLNPD-IARLADP-------LEHYLQIGGFEWRRAHPRFDAQWYAGRYG 160
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
D+ + HYI G +EGR+ F + +R
Sbjct: 161 DVL----TSGLHPLVHYILIGRQEGRSAVPPARLFDIAKKMISDAR 202
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 14/87 (16%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYD 493
F Y + D+ + +H+ G E R FD+ Y G Y
Sbjct: 109 ESGLFDPDFYRRLNPDIAR--------LADPLEHYLQIGGFEWRRAHPRFDAQWYAGRYG 160
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRN 520
D+ HYI G +EGR+
Sbjct: 161 DVLTSGLH----PLVHYILIGRQEGRS 183
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSY 408
Y D+ ++ + ++H+ + G E R FD+ Y G Y
Sbjct: 105 RIVSESGLFDPDFYRRLNPDIARLA-----DPLEHYLQIGGFEWRRAHPRFDAQWYAGRY 159
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
D+ HYI G +EGR+
Sbjct: 160 GDVLT----SGLHPLVHYILIGRQEGRSAVP 186
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 37/112 (33%), Gaps = 19/112 (16%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y D+ + HY+ G E R F A Y + D++ +
Sbjct: 113 FDPDFYRRLNPDIARLAD-----PLEHYLQIGGFEWRRAHPRFDAQWYAGRYGDVLTSGL 167
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
H+ G +EGRS L+ D+ SD A +H
Sbjct: 168 HP-------LVHYILIGRQEGRSAVPPARLF-----DIAKKMISDAR-AIEH 206
>gi|195332885|ref|XP_002033123.1| GM20587 [Drosophila sechellia]
gi|194125093|gb|EDW47136.1| GM20587 [Drosophila sechellia]
Length = 776
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 44/170 (25%)
Query: 52 QEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDS-------------R 97
+ + + AL W+ LTF E S +DI+ + + + ++D
Sbjct: 171 ERMVQSALDVWASHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAFYPSEG 230
Query: 98 YFMEINFDKADVWRYGIGK----GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ +FD + W + GT + ALHE+GH+LGL H +
Sbjct: 231 RGGDAHFDADETWNFDGESDDSHGTNFFNVALHELGHSLGLAHSAIPDA----------- 279
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
VM + + + D +Q++YG + + G
Sbjct: 280 --------VMFPWYQNNEVAGK-------LPDDDRYGIQQLYGTKEKTWG 314
>gi|114635797|ref|XP_508241.2| PREDICTED: matrix metalloproteinase-26 [Pan troglodytes]
Length = 261
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 65/192 (33%), Gaps = 55/192 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKF 81
W+ + + Y+ + ++ A+ WS V L F++ +DIK
Sbjct: 99 WNKHTLTYRIINYPHDMKPSTV-------KDSIYNAVSIWSNVTPLIFQQVQNEDADIKI 151
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ P +S ++FDK + W G L A HEI
Sbjct: 152 SFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWS-ASDTGYNLFLVATHEI 210
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMV- 185
GH+LGL H G+ +S+M +Y+ + T +
Sbjct: 211 GHSLGLQHSGN-------------------RSSIMYPTYW----------YHDPRTFQLS 241
Query: 186 -SDIVAVQKIYG 196
DI +Q +YG
Sbjct: 242 ADDIQRIQHLYG 253
>gi|56681804|gb|AAW21438.1| leukotoxin A [Pasteurellaceae bacterium I48]
Length = 390
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 230 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 289
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 290 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 326
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 218 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 274
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 275 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 319
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 216 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 271
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 272 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 331
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 332 LVITNTKQEKVTI--QNWFREAEFAKTIRNYVATRDDKIEEIIGQNGERI 379
>gi|77464082|ref|YP_353586.1| hypothetical protein RSP_0513 [Rhodobacter sphaeroides 2.4.1]
gi|77388500|gb|ABA79685.1| hypothetical protein RSP_0513 [Rhodobacter sphaeroides 2.4.1]
Length = 475
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 13/139 (9%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + ++ +G + L + GG + G + + +
Sbjct: 309 TGTAAINGAGNGLANVLWGNGAANRL--SGGGGNDR-----------LEGRDGSDVLNGG 355
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T ++++G +G+D + G + ++ SGND DG D A + +
Sbjct: 356 TGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGRE 415
Query: 326 IVYDANEHKQDFLSDVERL 344
++ D ++
Sbjct: 416 VITDFRVGNGGDRLEIHDY 434
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 29/113 (25%), Gaps = 13/113 (11%)
Query: 271 VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ +GN +V+ GN A N GND +G G D A
Sbjct: 313 AINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTL----IGGAGHD 368
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A D L R +L A + + G
Sbjct: 369 RLAGGTGSDRLVG------GSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGRE 415
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 22/57 (38%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+V G G D + G S ++ + GND G D + Y + + ++
Sbjct: 225 TVFGKGGADDLRGTSGEDLLYGFGGNDTLRGGGAADRMIGGTRNDTYIVDHAGDEVV 281
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 6/134 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-YKIYRFENAII 326
+E++ S + V G + +SG D+ G G DT + R + I+
Sbjct: 215 VENIRLPS-DSTVFGKGGADDLRGTSGEDLLYGFGGNDTLRGGGAADRMIGGTRNDTYIV 273
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +E + ++R+ + + +V++ + A + +
Sbjct: 274 DHAGDEVVERAGEGLDRVCASVSHQLAAHVERLVLTGTAAINGAGNGLANVLWGNGAANR 333
Query: 387 YEFG----LSEGRD 396
G EGRD
Sbjct: 334 LSGGGGNDRLEGRD 347
Score = 37.4 bits (85), Expect = 8.8, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 21/172 (12%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF----- 298
++ S S++ G + + + + G GND + G A + + ND +
Sbjct: 217 NIRLPSDSTVFGKGGADDLRGTSGEDLLYGFGGNDTLRGGGAADRMIGGTRNDTYIVDHA 276
Query: 299 ------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-------ERLR 345
GLD + S+ + + A + L++V RL
Sbjct: 277 GDEVVERAGEGLDR-VCASVSHQLAAHVERLVLTGTAAINGAGNGLANVLWGNGAANRLS 335
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGR 395
+L ++ LI G D G R
Sbjct: 336 GGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDR 387
>gi|83954971|ref|ZP_00963649.1| type I secretion target repeat protein [Sulfitobacter sp. NAS-14.1]
gi|83840697|gb|EAP79869.1| type I secretion target repeat protein [Sulfitobacter sp. NAS-14.1]
Length = 590
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 26/80 (32%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N TI +++ G GND + G ++ G D G D S L+
Sbjct: 266 GNDTILGGEGDDTIFGQGGNDSLDGGEGDDQIEGGDGQDTITSGGGNDRAEGGQGSDLFN 325
Query: 318 IYRFENAIIVYDANEHKQDF 337
N IV + D
Sbjct: 326 FTSGGNHTIVGGEDADGTDV 345
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
I T +++ G++ +D + + ++V G+D +G G D + A
Sbjct: 3 AINGTTGTDTLQGTAEDDRIDAGAGDDVVSGEGGDDRINGGEGDDVLYGDAGVGT 57
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
I G T+ + + +G+DVV G ++ G+DV G +G
Sbjct: 4 INGTTGTDTLQGTAEDDRIDAGAGDDVVSGEGGDDRINGGEGDDVLYGDAG 54
>gi|186686966|ref|YP_001870159.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
gi|186469318|gb|ACC85118.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
Length = 1001
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I + + + G++GND +IG + N+ + +GND+ G +G D
Sbjct: 871 VNGQGGDDIINGLSGNDLLRGNAGNDTLIGGAGNDTLYGGAGNDLLYGGAGSDILTGDNG 930
Query: 313 SYLYKIYRFENAIIVYD 329
+ ++ E + D
Sbjct: 931 NDIFAFAAGEGTDTITD 947
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 49/147 (33%), Gaps = 8/147 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D D+ ++ I N + + + N++ + + G GND + G S ++
Sbjct: 151 TDSFDVFNANSTQSTI-FNKNTVTFLNDLSNNVS-GFDNSDDVINGQGGNDRIDGLSGDD 208
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ +GND G +G DT Y + I + D + +
Sbjct: 209 ILRGGAGNDTLIGGAGNDTLIGYQGNNAL-IGDIGEDYLNVDTSTGDNTLNGGI-----G 262
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQV 374
D +++ + L + L
Sbjct: 263 DDTLNARGTTGNNSLSGGDGNDYLSTS 289
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 61/169 (36%), Gaps = 7/169 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I G + I + +++ G GND +IG + N+V GND+ G G D F Y
Sbjct: 671 DISGTVSDDYIIGNNGNDTLSGGYDGNDTIIGGAGNDVVIGGKGNDILTGGVGNDKFVYD 730
Query: 311 APSYLYKIYR---FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + I D+N Q ++ ++ L F D + Q L +
Sbjct: 731 LLESNYDTGTDIITDFGGIGKDSNP-SQAVIASLDTLEFIDNSGFRLFSAQNLQLTQNGN 789
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNV 414
++ + S F L G +I F + + D+ +
Sbjct: 790 NLEITFEDLFNSSNSKVILQNFQLENLDGENILFPGQTTITNSIDVFDA 838
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 55/174 (31%), Gaps = 31/174 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ E D+ + G+D L + ++ +E +++ G +
Sbjct: 310 GGAGNDTLNAESPSGDN----LLSGGDGNDYLSTSGTKSDNGQLNFTSEGNNTLDGGAGD 365
Query: 260 MTIAQH--TVIESVVGSSGNDV------------VIGNSANNVFFESSGNDVFD------ 299
+ T + G GND ++ +S NN +G+D
Sbjct: 366 DRLYADISTGNNLLSGGDGNDTLSTSGTYTRNSFIVPSSGNNTLNGGAGDDYLYASASTG 425
Query: 300 -----GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
G G D+F S + ++ + K D L L F D
Sbjct: 426 SNFFSGGDGNDSFSLSTISSDGS--PSNSYLVTQTVDGGKGDDLLSFNLLPFHD 477
Score = 41.3 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 12/100 (12%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFFYYAPSYLYKIYR 320
+++G++GND ++G+ + +GND G+ G D F Y + + I
Sbjct: 3 NIIGTNGNDTLVGSYEADTINGEAGNDTITGNEGDDTLTGGGGKDQFVYNYYTGIDIITD 62
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
F + + +++V+ L+F + N+
Sbjct: 63 FGGIGKGVNPSAG---VIAEVDTLQFQGAALTDRNMLLTQ 99
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 50/151 (33%), Gaps = 25/151 (16%)
Query: 200 GSLGNNIY-----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
S G+N + + + ++ G+D L + Y + + S +++
Sbjct: 250 TSTGDNTLNGGIGDDTLNARGTTGNNSLSGGDGNDYLSTSSFPIYSGYSYIASSSNNTLD 309
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS-------------GNDVFDGS 301
G N T+ + SG++++ G N+ S GN+ DG
Sbjct: 310 GGAGNDTL-------NAESPSGDNLLSGGDGNDYLSTSGTKSDNGQLNFTSEGNNTLDGG 362
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+G D + + + + + +
Sbjct: 363 AGDDRLYADISTGNNLLSGGDGNDTLSTSGT 393
Score = 37.4 bits (85), Expect = 7.5, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 40/160 (25%), Gaps = 37/160 (23%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE--SV 271
+ T+ G+D L G I E + ++ + T+ + +
Sbjct: 211 RGGAGNDTLIGGAGNDTL--IGYQGNNALIGDIGEDYLNVDTSTGDNTLNGGIGDDTLNA 268
Query: 272 VGSSGNDVVIGNSAN----------------------NVFFESSGNDVFD---------- 299
G++GN+ + G N N +GND +
Sbjct: 269 RGTTGNNSLSGGDGNDYLSTSSFPIYSGYSYIASSSNNTLDGGAGNDTLNAESPSGDNLL 328
Query: 300 -GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
G G D F + D L
Sbjct: 329 SGGDGNDYLSTSGTKSDNGQLNFTSEGNNTLDGGAGDDRL 368
>gi|304412243|ref|ZP_07393852.1| type 1 secretion target domain protein [Shewanella baltica OS183]
gi|304349509|gb|EFM13918.1| type 1 secretion target domain protein [Shewanella baltica OS183]
Length = 1635
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 12/161 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G GND++ G N+ + +GND+ G +G DT + V+
Sbjct: 1453 DVLIGGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKLT-GGTGADTFVW 1511
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE------YTASYEDLIQVIGQDVFES 382
A E D ++D D + + + L+ +S +I +
Sbjct: 1512 QAGESGTDHITDFNIHEDKLDLRDLLQGENTNTLDSYLNFSLNSSGSTVIDIDANQDGVF 1571
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+H G++ FD Y + + GS+
Sbjct: 1572 EQHIILDGVN-----LFDEYGSTNDAGIINGLLGSNNDGPL 1607
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 7/141 (4%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N + + + G +GND++ G + N+ GND G +G DTF + A
Sbjct: 1457 GGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKLTGGTGADTFVWQAGES 1516
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N +++ +D L E D ++ S + + +D V
Sbjct: 1517 GTDHITDFN---IHEDKLDLRDLLQG-ENTNTLDSYLNFSLNSSGSTVIDIDANQD--GV 1570
Query: 375 IGQDVF-ESMKHFYEFGLSEG 394
Q + + + F E+G +
Sbjct: 1571 FEQHIILDGVNLFDEYGSTND 1591
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 80/247 (32%), Gaps = 37/247 (14%)
Query: 197 APKGSLGNNIYKIEV----QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + G + + +TI ++ G D L GG + + N
Sbjct: 789 SNFKTSGITTEQFRTGDFTTAPFNTGTRTIDNTSGQDQL--LGTGGNDHLVSANGGGD-L 845
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + ++ D + G + N+V GND G +G D
Sbjct: 846 LYGMDGDDILVGSDAVQ-------GDSLYGGTGNDVLVAGLGNDGLYGDAGTDIAVLLGN 898
Query: 313 SYLYKIYRFENAII--------VYDANEHKQDFLSDVERLRFAD------QCIDSVNVKQ 358
Y I + V + L DVE ++F D Q + ++Q
Sbjct: 899 RADYIIEKGTGYSSNDRWFNFFVTENGIGVTKALHDVEYVQFKDGIYAINQITGELTLEQ 958
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ ++Y + + +D ES+ GL EG + LY S L +D
Sbjct: 959 PTAVDYPIEIN--VSLADRDGSESIDSIQLSGLPEG------TLLY-SSNGTLMGTADAD 1009
Query: 419 RGAAARH 425
H
Sbjct: 1010 GNILLNH 1016
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D G L + I G N + + + G +GND +IG N+
Sbjct: 1442 DFDQSGASDKADVLIGGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKLT 1501
Query: 291 ESSGNDVF---DGSSGLDTF 307
+G D F G SG D
Sbjct: 1502 GGTGADTFVWQAGESGTDHI 1521
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 10/110 (9%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+V GND+ G G D + + L F A D L+
Sbjct: 1452 ADVLIGGQGNDILYGQGGNDQLYGGNGNDL----IFGGAGNDTIIGGLGNDKLTGG---T 1504
Query: 346 FADQCIDSVNVKQRSILEYTASYE---DLIQVIGQDVFESMKHFYEFGLS 392
AD + + +E DL ++ + ++ + F L+
Sbjct: 1505 GADTFVWQAGESGTDHITDFNIHEDKLDLRDLLQGENTNTLDSYLNFSLN 1554
>gi|213623846|gb|AAI70300.1| Matrix metalloproteinase 21 [Xenopus laevis]
gi|213627655|gb|AAI70298.1| Matrix metalloproteinase 21 [Xenopus laevis]
Length = 604
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 52/226 (23%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYK-PDVLTTHRLSFDITELNPNAQEVARWAL 59
M++ K Y E+ A + ++ ++++ +++LS + + V R A
Sbjct: 186 MYSNK--YREEQEALQKSTGKVFTKKLLKWRMIGEGYSNQLSIN------EQRYVFRLAF 237
Query: 60 GEWSKVVDLTFEETSIH----SDIKFISS-------NNGYVCTPR-YDSRYF-MEINFDK 106
WS+V+ L FEE + DIK + + + + + +F +I+FD
Sbjct: 238 RMWSEVMPLDFEEDNTSPLSQIDIKLGFGRGRHLGCSRAFDGSGQEFAHAWFLGDIHFDD 297
Query: 107 ADVWR-YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
+ + G L A HEIGH LGL H + S+M
Sbjct: 298 DEHFTAPSSEHGISLLKVAAHEIGHVLGLSHIH-------------------RVGSIM-- 336
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGA---PKGSLGNNIYK 208
P D+ F +SD A+Q +YG+ P + + IYK
Sbjct: 337 -QPNYIPQDSGFE----LDLSDRRAIQNLYGSCEGPFDTAFDWIYK 377
>gi|150376845|ref|YP_001313441.1| putative secreted calcium-binding protein [Sinorhizobium medicae
WSM419]
gi|4689002|emb|CAB41457.1| calcium binding protein [Sinorhizobium meliloti]
gi|150031392|gb|ABR63508.1| putative secreted calcium-binding protein [Sinorhizobium medicae
WSM419]
Length = 219
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ G+D + GG + + G + I + ++G +G+D ++
Sbjct: 49 LFGGNGNDTV----FGGEGTDVLHGENGNDVLVGGSGDDLIYGDNGDDILLGGAGSDFLL 104
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G N+V +GNDV DG SG D S ++ ++ D
Sbjct: 105 GGRGNDVLLGGAGNDVIDGGSGSDLLAGGQGSDIFVFDGGGGNDVILDFTPG 156
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 7/131 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I H + V G +G+D++ G+ +++ F +GND G G D
Sbjct: 13 LFGSRFDDFIRAHGGDDFVNGGNGDDIIFGDEGDDLLFGGNGNDTVFGGEGTDVLHGENG 72
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + ++ D L + + L + +++ + +
Sbjct: 73 ND----VLVGGSGDDLIYGDNGDDILLGGAGSDFLLGGRGNDVLLGGAGNDVIDGGSGSD 128
Query: 370 DLIQVIGQDVF 380
L G D+F
Sbjct: 129 LLAGGQGSDIF 139
>gi|332710198|ref|ZP_08430150.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332351037|gb|EGJ30625.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 847
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 11/150 (7%)
Query: 203 GNNIY--KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ Y +D G G D +D + ++L + S ++
Sbjct: 646 GDDKYVGGAGNDTFQDSGGVNYFDGGEGRDTVDFQNLINSGIKLNLAEGTGSYTDEQDQE 705
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAP 312
+ IE VG++ ND +IGN +N+ G+D G +G D +
Sbjct: 706 VA-QTLISIERAVGTNFNDELIGNGEDNILLGLDGDDTITGGAGNDVIKTGDGNNTIDSG 764
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S + I + D + + +
Sbjct: 765 SGVDTIELGNGNNTIALEEGEGHDKVINFQ 794
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 78/217 (35%), Gaps = 28/217 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN++++ +D G G D +D + ++L + S ++
Sbjct: 189 GGAGNDVFRDSAGVN-------YFDGGEGLDTVDFQNLINSGIKLNLAEGTASYTDEQDQ 241
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVF---------FESSGNDV---------FDG 300
+ IE VG++ ND + GN +N F +GND FDG
Sbjct: 242 EVA-QTLISIERAVGTNFNDELTGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDG 300
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQR 359
G DT ++ + ++ E I D+N+ + L +E + + + + Q
Sbjct: 301 GEGRDTVDFFEFDFGVQVNIVEGTAISTDSNDQEIIQTLISIENVLGTNFDDELIGNGQG 360
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + I G DVF F EG D
Sbjct: 361 NTFLGYNGNDKFIGGAGNDVFRDSAGVNYFDGGEGLD 397
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E N I + + + G G+DV+ GN N+ F G DV G +G D + +
Sbjct: 31 VRGREGNDLIQGNLGNDVISGDQGDDVIQGNEGNDTLFGGEGEDVIQGGAGNDRIWGDSG 90
Query: 313 SYLYKIYRFEN-----AIIVYDANEHKQDFLSDVERL 344
+ + + + A + Y D + E +
Sbjct: 91 NDVLQGGAGNDTFRDSAGVNYFDGGEGLDTVEFQELI 127
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 9/137 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN++++ +D G G D +D + ++L + S ++
Sbjct: 374 GGAGNDVFRDSAGVN-------YFDGGEGLDTVDFRNLINSGIKLNLAEGTGSYTDEQDQ 426
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ IE V G++ ND + GN +N F G+D + G +G DTF +
Sbjct: 427 EVA-QTLISIERVFGTNFNDELTGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDG 485
Query: 319 YRFENAIIVYDANEHKQ 335
+ + ++ + Q
Sbjct: 486 GEGRDTVDFFEFDFGVQ 502
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 9/136 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN++++ +D G G D ++ + ++L + S ++
Sbjct: 559 GGAGNDVFRDSAGVN-------YFDGGEGLDTVNFQNLINSGIKLNLAEGTASYTDEQDQ 611
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ IE V G++ ND +IGN +N F G+D + G +G DTF +
Sbjct: 612 EVA-QTLISIERVFGTNFNDELIGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDG 670
Query: 319 YRFENAIIVYDANEHK 334
+ + +
Sbjct: 671 GEGRDTVDFQNLINSG 686
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 71/217 (32%), Gaps = 25/217 (11%)
Query: 203 GNNIY--KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ Y +D G G D +D +++ + S ++
Sbjct: 276 GDDKYVGGAGNDTFQDSGGVNYFDGGEGRDTVDFFEFDFGVQ-VNIVEGTAISTDSNDQE 334
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I IE+V+G++ +D +IGN N F +GND F G +G D F A +
Sbjct: 335 I-IQTLISIENVLGTNFDDELIGNGQGNTFLGYNGNDKFIGGAGNDVFRDSAGVNYFDGG 393
Query: 320 RF--------------------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ ++ L +ER+ + + +
Sbjct: 394 EGLDTVDFRNLINSGIKLNLAEGTGSYTDEQDQEVAQTLISIERVFGTNFNDELTGNEVD 453
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + + G D F+ F EGRD
Sbjct: 454 NTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDGGEGRD 490
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 9/136 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+ ++ +D G G D ++ + ++L + S +
Sbjct: 96 GGAGNDTFRDSAGVN-------YFDGGEGLDTVEFQELINSGIKLNLVEGTASYTDDQSQ 148
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+T IE VG++ ND +IGN A+N F G+D + G +G D F A +
Sbjct: 149 EVT-QTLISIERAVGTNFNDELIGNEADNSFSGLEGDDKYVGGAGNDVFRDSAGVNYFDG 207
Query: 319 YRFENAIIVYDANEHK 334
+ + +
Sbjct: 208 GEGLDTVDFQNLINSG 223
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 77/217 (35%), Gaps = 25/217 (11%)
Query: 203 GNNIY--KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ Y +D G G D +D ++L + SS ++
Sbjct: 461 GDDKYVGGAGNDTFQDSGGVNYFDGGEGRDTVDFFEFDFGVQ-VNLVEGTASSTDSNDQE 519
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYY 310
+T IE+V G++ +D +IGN N F +GNDVF S+G++ F
Sbjct: 520 IT-QTLISIENVFGTNFDDELIGNDQGNSFLGYNGDDKYLGGAGNDVFRDSAGVNYFDGG 578
Query: 311 APSYLYKIYRFENAIIVYD------ANEHKQD-----FLSDVERLRFADQCIDSVNVKQR 359
N+ I + + +QD L +ER+ + + + +
Sbjct: 579 EGLDTVNFQNLINSGIKLNLAEGTASYTDEQDQEVAQTLISIERVFGTNFNDELIGNEVD 638
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + + G D F+ F EGRD
Sbjct: 639 NTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDGGEGRD 675
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 17/127 (13%)
Query: 260 MTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
M I T+ E ++ G S ND++ N++ GND+ G+ G D + +
Sbjct: 1 MAIILGTLNEDNLEGLSENDIIQALDGNDIVRGREGNDLIQGNLGNDVISGDQGDDVIQ- 59
Query: 319 YRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D L E ++ +L+ A +
Sbjct: 60 ------------GNEGNDTLFGGEGEDVIQGGAGNDRIWGDSGNDVLQGGAGNDTFRDSA 107
Query: 376 GQDVFES 382
G + F+
Sbjct: 108 GVNYFDG 114
>gi|284053148|ref|ZP_06383358.1| cadherin [Arthrospira platensis str. Paraca]
Length = 151
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 36/88 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N I + +++ G +GND + G +++ F G+D+ G+ G DT
Sbjct: 17 IYGGQGNDLIHGGSGNDTLFGDAGNDTIFGEEGDDLIFGGEGDDILIGAEGNDTLTGGEG 76
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I + D + L D
Sbjct: 77 RDRFVIAATHGTNTITDFTVGQDMILLD 104
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N TI + + + G GND++ G S N+ F +GND G G D F
Sbjct: 1 GNQGNDTIFGGSGDDLIYGGQGNDLIHGGSGNDTLFGDAGNDTIFGEEGDDLIFGGEGDD 60
Query: 315 -------LYKIYRFENAIIVYDANEHKQDFLSDV 341
+ E A H + ++D
Sbjct: 61 ILIGAEGNDTLTGGEGRDRFVIAATHGTNTITDF 94
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G SG+D++ G N++ SGND G +G DT F L F
Sbjct: 6 DTIFGGSGDDLIYGGQGNDLIHGGSGNDTLFGDAGNDTIFGEEGDDL----IFGGEGDDI 61
Query: 329 DANEHKQDFLSDVE 342
D L+ E
Sbjct: 62 LIGAEGNDTLTGGE 75
>gi|323976022|gb|EGB71115.1| type 1 secretion protein [Escherichia coli TW10509]
Length = 7189
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 46/127 (36%), Gaps = 7/127 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + S
Sbjct: 6965 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSVTTAQATG 7018
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y S
Sbjct: 7019 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLSASDAT 7078
Query: 319 YRFENAI 325
+ +
Sbjct: 7079 GGNGSDV 7085
>gi|296216039|ref|XP_002754394.1| PREDICTED: matrilysin-like [Callithrix jacchus]
Length = 267
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 72/215 (33%), Gaps = 50/215 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L + W++ + Y+ T + + + AL W
Sbjct: 84 KPRCGVPDVAEYSLFPDHAKWTSKVVTYRIMSYTRDLPRITV-------ERLVSKALNMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F + +DI + + +D + +FD+ +
Sbjct: 137 GKEIPLRFRKLPWGTADIMIGFARGAHGDPYPFDGPGNTLAHAFAPGPGLGGDAHFDEDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFM 167
W G G + A HE+GH+LG+ H N YP YG
Sbjct: 197 RWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNG----------------D 240
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
PQ+ + DI +QK+YG S
Sbjct: 241 PQNFKLSQ----------DDIKGIQKLYGTRSNSR 265
>gi|255318886|ref|ZP_05360112.1| biofilm-associated protein [Acinetobacter radioresistens SK82]
gi|262378859|ref|ZP_06072016.1| hypothetical protein HMPREF0018_00803 [Acinetobacter radioresistens
SH164]
gi|255304142|gb|EET83333.1| biofilm-associated protein [Acinetobacter radioresistens SK82]
gi|262300144|gb|EEY88056.1| hypothetical protein HMPREF0018_00803 [Acinetobacter radioresistens
SH164]
Length = 1391
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ N+ + GY+ N T+ + + ++G +G+D + + N+ +GND G G
Sbjct: 1221 NSNSTVSQRLYGYDGNDTLNGGSGNDILLGGNGDDTLNAGAGNDYINGGAGNDTITGGPG 1280
Query: 304 LDTFFYY-APSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSI 361
DT + + + + + + D +D ++ +++ N+ Q
Sbjct: 1281 ADTVVFDLLVAANARGGNGTDTWTDFHVGNIRTDNQADRIDVSDLLGGEVNANNLGQYIQ 1340
Query: 362 LEYTASYEDLIQVIGQDVF 380
L Y ++ + I +D
Sbjct: 1341 LNYNSTSSTVTLSIDRDGT 1359
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+S Q +Y G+D L+ GG N I L ++ N I +++
Sbjct: 1221 NSNSTVSQRLYGYDGNDTLN----GGSGNDILLGGNGDDTLNAGAGNDYINGGAGNDTIT 1276
Query: 273 GSSGNDVVIGN--SANNVFFESSGNDV 297
G G D V+ + A N +G D
Sbjct: 1277 GGPGADTVVFDLLVAANA-RGGNGTDT 1302
Score = 37.4 bits (85), Expect = 7.2, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 22/151 (14%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q++YG Y + GDD L+ G +YI+ + +
Sbjct: 1228 QRLYG----------YDGNDTLNGGSGNDILLGGNGDDTLN---AGAGNDYINGGAGNDT 1274
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVI----GN-SANNVFFESSGNDVFDGSSGLDT 306
GG + + V + G +G D GN +N +D+ G +
Sbjct: 1275 ITGGPGADTVVFDLLVAANARGGNGTDTWTDFHVGNIRTDNQADRIDVSDLLGGEVNANN 1334
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
Y+ Y ++ + +
Sbjct: 1335 L----GQYIQLNYNSTSSTVTLSIDRDGTGT 1361
>gi|209528316|ref|ZP_03276774.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491249|gb|EDZ91646.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 686
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ + +V G+D+++GN +++ F GND G G DT +
Sbjct: 525 QGNNTLFGGQGNDILVAGQGDDILLGNKDDDILFGGDGNDAIYGGQGNDTLVAGNGN--- 581
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+I + + D L E + + + + S++ +D++ ++G
Sbjct: 582 QILFGDQGNDILFGGTQGVDTLVGGE----GNDTLVMLPGEGYSMVTDFQVNQDMVVLLG 637
Query: 377 QD 378
Sbjct: 638 SP 639
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 18/183 (9%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+T+ GDD L + TL GG N I + + + G + + + +++ G
Sbjct: 510 ETLLGFQGDDWLQVSQGNNTLFGGQGNDILVAGQGDDILLGNKDDDILFGGDGNDAIYGG 569
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSS-GLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND ++ + N + F GND+ G + G+DT + + E +V
Sbjct: 570 QGNDTLVAGNGNQILFGDQGNDILFGGTQGVDTLVGGEGNDTLVMLPGEGYSMV------ 623
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILE-----YTASYEDLIQVIGQDVFESMKHFYE 388
DF + + + D S Y A + L+ V+ S++
Sbjct: 624 -TDFQVNQDMVVLLGSPDDYEIGSLPSGFHSGTAIYVAGSDQLVGVLEGVTNVSLEDGNI 682
Query: 389 FGL 391
FG
Sbjct: 683 FGW 685
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I E+++G G+D + + NN F GND+ G D
Sbjct: 494 WFGTDHHDVIIGTASDETLLGFQGDDWLQVSQGNNTLFGGQGNDILVAGQGDDILLG--N 551
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI--LEYTASYED 370
++ + +Y + + ++ F DQ D + + + L +
Sbjct: 552 KDDDILFGGDGNDAIYGGQGNDTLVAGNGNQILFGDQGNDILFGGTQGVDTLVGGEGNDT 611
Query: 371 LIQVIGQD 378
L+ + G+
Sbjct: 612 LVMLPGEG 619
>gi|254466358|ref|ZP_05079769.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
gi|206687266|gb|EDZ47748.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
Length = 523
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 15/110 (13%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND 278
I+ GGDD++ S + G N I + + ++G SGND
Sbjct: 331 NAIFALGGDDII--------------RAGGGSDAVAGGSGNDDIRGGSGNDVILGGSGND 376
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
V GN +++ G+DV G SG D S L + I
Sbjct: 377 TVNGNRDDDIISGGDGDDVLRGGSGNDVIADGRGSDLVLGGLGNDTFIFT 426
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 43/129 (33%), Gaps = 1/129 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I + I ++V G SGND + G S N+V SGND +G+ D
Sbjct: 333 IFALGGDDIIRAGGGSDAVAGGSGNDDIRGGSGNDVILGGSGNDTVNGNRDDDIISGGDG 392
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + I ++ L + + F + + A + L
Sbjct: 393 DDVLRGGSGNDVIADGRGSDLVLGGLGN-DTFIFTEAALAGGGGASADTFRGGAGTDTLY 451
Query: 373 QVIGQDVFE 381
V+ F
Sbjct: 452 LVLDGANFA 460
>gi|22218341|ref|NP_671724.1| matrix metalloproteinase-21 preproprotein [Homo sapiens]
gi|317373390|sp|Q8N119|MMP21_HUMAN RecName: Full=Matrix metalloproteinase-21; Short=MMP-21; Flags:
Precursor
gi|22134532|gb|AAM92903.1|AF331526_1 putative matrix metalloproteinase [Homo sapiens]
gi|55661689|emb|CAH73211.1| matrix metallopeptidase 21 [Homo sapiens]
gi|55959618|emb|CAI12086.1| matrix metallopeptidase 21 [Homo sapiens]
gi|162318546|gb|AAI56369.1| Matrix metallopeptidase 21 [synthetic construct]
gi|225000648|gb|AAI72493.1| Matrix metallopeptidase 21 [synthetic construct]
Length = 569
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 41/168 (24%)
Query: 45 TELN-PNAQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY- 98
++L+ + + + A WS+V L F E + + DIK ++ PR
Sbjct: 187 SQLSVADQRRIVALAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSG 246
Query: 99 --------FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + + G L A+HEIGH LGL P +Y G
Sbjct: 247 QEFAHAWRLGDIHFDDDEHFTPPTSDTGISLLKVAVHEIGHVLGL--PHTYRTG------ 298
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + +F SD A+QK+YG+
Sbjct: 299 -----------SIM---QPNYIPQEPAFE----LDWSDRKAIQKLYGS 328
>gi|84516511|ref|ZP_01003870.1| hypothetical protein SKA53_07866 [Loktanella vestfoldensis SKA53]
gi|84509547|gb|EAQ06005.1| hypothetical protein SKA53_07866 [Loktanella vestfoldensis SKA53]
Length = 1211
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 33/95 (34%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + T+ +++VG +G D + G + +G D G +G DT A
Sbjct: 835 DVTLADGGATVVLGANADTLVGGNGADNITGGGGADTLTGGAGADTITGGAGADTLIGSA 894
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ I + D + +RF
Sbjct: 895 GDDIFLIGAAGKGEGSHHELGEIIDGGEGNDTVRF 929
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 3/123 (2%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI E++ G GND + G + +N+ + GND G G DTF A + +
Sbjct: 527 TIIGGNANETITGGMGNDNLDGGNGDNILDGAGGNDTLTGQLGHDTFRITAGTDTVNRFM 586
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ++V + + + ++ + D V
Sbjct: 587 GSDVVVVSAGATAIVNVA---QEFTATNASRNNGGAAANARFNVDTLNVDFANFSAMTVV 643
Query: 381 ESM 383
+++
Sbjct: 644 DAV 646
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 255 GYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N+TI ++ ++G GND ++ S N+ +GND DG +G+D
Sbjct: 395 GTAGNVTIDTTGASNRVDFILGGDGNDNILAGSGNDHIIGGAGNDTLDGGAGVDRIHAG- 453
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
I +N + D D L
Sbjct: 454 --DGDDIILGDNDDVSLDGGN-GTDTLRLFASFT 484
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 9/124 (7%)
Query: 223 YDSGGDDLLDLTLIGGVKNY---IDLNTESWSSIGGYEKNMTIAQHTVIE---SVVGSSG 276
D+ D + + + V ID+ + G + IE +V +G
Sbjct: 627 VDTLNVDFANFSAMTVVDAVTEGIDIRGAAAVGGLGTSIITGTNGNDTIEGFSTVNAGAG 686
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D V G + N+ +G D G G DTF + A ++ D
Sbjct: 687 DDTVTGAAGNSTITGGAGADTLAGGGGNDTFVFGATDSAS---VPGAGTTDATGSDRITD 743
Query: 337 FLSD 340
+ +
Sbjct: 744 WNAG 747
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 2/97 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + I ++++ SGND +IG + N+ +G D G D
Sbjct: 404 TTGASNRVDFILGGDGNDNILAGSGNDHIIGGAGNDTLDGGAGVDRIHAGDGDDIILGDN 463
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF--LSDVERLRF 346
+ + ++ + +D ++ +E +
Sbjct: 464 DDVSLDGGNGTDTLRLFASFTSNRDISQMTSIEVITL 500
Score = 45.1 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 33/117 (28%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G +IG +AN GND DG +G + + + + +
Sbjct: 523 TGASTIIGGNANETITGGMGNDNLDGGNGDNILDGAGGNDTLTGQLGHDTFRITAGTDTV 582
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
F+ + A ++ + + + +V F F
Sbjct: 583 NRFMGSDVVVVSAGATAIVNVAQEFTATNASRNNGGAAANARFNVDTLNVDFANFSA 639
Score = 41.3 bits (95), Expect = 0.61, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 17/183 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQ---TIYDSG-GDDLLDLTLIGGVKN----------YIDL 245
GS G++I+ I K I D G G+D + + +
Sbjct: 892 GSAGDDIFLIGAAGKGEGSHHELGEIIDGGEGNDTVRFVSTKPNDTLQLTADVKVETVAI 951
Query: 246 NTESWSSIGGYEKNM--TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ S++G N+ + +T ++G++G + + GN+ NN GND+ G G
Sbjct: 952 SDAHGSTVGTSNSNIDASNMINTEHVILIGNNGANQLTGNAGNNTIIGGGGNDLIRGGPG 1011
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D A S + + + + D + +E +D+ +V + L
Sbjct: 1012 DDNLSGGAGSEDFIFNLSDTGVNRITDFQVSVDDII-LEVTGLSDRDGVAVAADTINNLS 1070
Query: 364 YTA 366
+ +
Sbjct: 1071 FDS 1073
>gi|262276014|ref|ZP_06053823.1| hypothetical protein VHA_002997 [Grimontia hollisae CIP 101886]
gi|262219822|gb|EEY71138.1| hypothetical protein VHA_002997 [Grimontia hollisae CIP 101886]
Length = 3056
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G DL T + G E + T+ E + G+D + G +++ +G+D
Sbjct: 2877 SGQLVVFDLTTTQF----GTEADDTLTAGDDGERIYAGDGDDTLTGGLGDDILVGGAGDD 2932
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G +G DTF + + NE D L
Sbjct: 2933 LLTGGTGDDTFAWSGSDVEAGTVAVDTITDFDLGNETTGDKL 2974
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIV 327
G+ +D + + G+D G G D A L ++ +
Sbjct: 2890 FGTEADDTLTAGDDGERIYAGDGDDTLTGGLGDDILVGGAGDDLLTGGTGDDTFAWSGSD 2949
Query: 328 YDANEHKQDFLSDVE 342
+A D ++D +
Sbjct: 2950 VEAGTVAVDTITDFD 2964
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 3/154 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ Q + + D G D + TL V T + N+ + +
Sbjct: 2669 RFSAQPPSDIAVTALSDVGDGDPKEATLTINVNVVDTETTGVLNDADNSADNLVVDGNAP 2728
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ V G +G DVV+G ++ +G+D G T A ++ + F +A V
Sbjct: 2729 AQ-VHGGAGEDVVVGGLGEDILVGGAGDDDIWGGEVGGTGDGDADTFKWVSGDFGDAANV 2787
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
A + +DF + ++ + +D + + +
Sbjct: 2788 --ATDTIKDFEAGIDVIDISDAFDTNGMITFTDL 2819
>gi|302563365|ref|NP_001180685.1| matrix metallopeptidase 23A (pseudogene) [Macaca mulatta]
Length = 569
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 45 TELNPN-AQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY- 98
++L+ + + A WS+V L F E + + DIK ++ PR
Sbjct: 187 SQLSAAEQRRIVALAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSG 246
Query: 99 --------FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + + G L A+HEIGH LGL P +Y G
Sbjct: 247 QEFAHAWRLGDIHFDDDEHFTPPTSDMGISLLKVAVHEIGHVLGL--PHTYRTG------ 298
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + +F SD A+QK+YG+
Sbjct: 299 -----------SIM---QPNYIPQEPAFE----LDWSDRKAIQKLYGS 328
>gi|94497762|ref|ZP_01304329.1| hypothetical protein SKA58_12300 [Sphingomonas sp. SKA58]
gi|94422811|gb|EAT07845.1| hypothetical protein SKA58_12300 [Sphingomonas sp. SKA58]
Length = 1425
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 12/87 (13%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y+ ++ D R V +H++ G+ R+P F Y+ + D++ A
Sbjct: 17 FDADWYVKTFPDARLV----DVTPIQHFVRFGLLLQRDPGPRFDTRHYVEVNPDVVAAGM 72
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFD 484
D H+ G EGR
Sbjct: 73 DP-------LLHYIRHGEAEGREPLPA 92
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 10/97 (10%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFD 400
L F D + Y ++ D V ++HF FGL RD FD
Sbjct: 1 MLTFDDLAREVEQSGLFDADWYVKTFPDARLV----DVTPIQHFVRFGLLLQRDPGPRFD 56
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ Y+ D+ G D HYI HG EGR P
Sbjct: 57 TRHYVEVNPDVVAA-GMD---PLLHYIRHGEAEGREP 89
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 13/93 (13%)
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLY 488
+E F A Y+ + D A + HF FG R FD+ Y
Sbjct: 8 AREVEQSGLFDADWYVKTFPD-------ARLVDVTPIQHFVRFGLLLQRDPGPRFDTRHY 60
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ D+ G D HYI HG EGR P
Sbjct: 61 VEVNPDVVAA-GMD---PLLHYIRHGEAEGREP 89
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y+ ++ D R V +H++ G+ R+P F Y+ + D++ A
Sbjct: 17 FDADWYVKTFPDARLV----DVTPIQHFVRFGLLLQRDPGPRFDTRHYVEVNPDVVAAGM 72
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI 565
D H+ G EGR
Sbjct: 73 DP-------LLHYIRHGEAEGREP 89
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 29/92 (31%), Gaps = 13/92 (14%)
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLY 572
+E F A Y+ + D A + HF FG R F+ Y
Sbjct: 8 AREVEQSGLFDADWYVKTFPD-------ARLVDVTPIQHFVRFGLLLQRDPGPRFDTRHY 60
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+ D+ HYI HG EGR
Sbjct: 61 VEVNPDVVAAGMD----PLLHYIRHGEAEGRE 88
>gi|261223972|ref|ZP_05938253.1| hypothetical protein EscherichiacoliO157_05107 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256314|ref|ZP_05948847.1| hypothetical protein EscherichiacoliO157EcO_10839 [Escherichia coli
O157:H7 str. FRIK966]
Length = 1170
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 946 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 999
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 1000 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 1059
Query: 319 YRFENAII 326
+ ++
Sbjct: 1060 GGNGSDVV 1067
>gi|259417266|ref|ZP_05741185.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
gi|259346172|gb|EEW57986.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
Length = 741
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 49/153 (32%), Gaps = 23/153 (15%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQH 265
Y E++ D ++ TI G + ++ G S + G + I
Sbjct: 211 YNWELRHPDDWYLGTI-QGGANPTVNFGASGLNDTVF---AGSGDDLVLGMYGDDVIYGE 266
Query: 266 TVIESVVGSSGNDVVI------------------GNSANNVFFESSGNDVFDGSSGLDTF 307
T +++ G G+D + G +++ +G+D G +G D
Sbjct: 267 TGADTLDGDYGDDTIWAGTDADTVDGGDGDDYLSGQEGDDLIQGGAGSDTLIGGTGNDEL 326
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
A ++I+ + D L D
Sbjct: 327 KGDADDDTFQIFDNSGVDTIIGGESGVDDDLVD 359
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 10/166 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES----WSSIGGYEKNM 260
+ Y + + + I +I+D G + G + +L + + ++ I G + +
Sbjct: 36 STYYVNIDAEAR--IISIWDGGAWYRVGEDGNGSTDS--NLGSPTSLDDFNIITGNDASD 91
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +S++G+ G+D + G+ ++ GND G G D+ A + +Y
Sbjct: 92 YIEASDGDDSLIGAGGDDTLSGDQGDDTIDGGEGNDNLAGGDGQDSILAGAGND--SVYA 149
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ A + + AD I+ V L+Y A
Sbjct: 150 DNVWATLSSAASGTGTTPTSLTVTNSADGPIELWWVDGAGQLQYYA 195
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 27/189 (14%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+D DY +D+ Y + D+ +Q GA +L
Sbjct: 272 LDGDYGDDTIWAGT----DADTVDGGDGDDYLSGQEGDDL--IQG--GAGSDTLIGGTGN 323
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--------WSSIGGYEKNM 260
E++ I+D+ G D + G + +DL+ S + IG E
Sbjct: 324 DELKGDADDDTFQIFDNSGVDTIIGGESGVDDDLVDLSGRSSGASVNFTGAEIGIIEGGS 383
Query: 261 TIAQHTVIESVVGSSGNDVVIG-----------NSANNVFFESSGNDVFDGSSGLDTFFY 309
A IE + + +D + + + S+G+D G G D F
Sbjct: 384 DTAYFQEIERLRLTDFDDSLDASASSAGVNVDAGAGADTLTGSAGDDSLTGGGGDDRFVM 443
Query: 310 YAPSYLYKI 318
I
Sbjct: 444 TTSGGADTI 452
>gi|147883920|gb|ABQ52218.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis]
Length = 1225
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 32/210 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
++YG G++ Q + + G D +D + G L+ +
Sbjct: 973 RLYGE----AGDD----WFFQDAANAGNLLDGGDGRDTVDFSGPGRG-----LDAGAKGV 1019
Query: 250 WSSIGGYEKNMTIAQHTV-----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+G ++ T IE+ VGS+ +DV+IG++ NV +GNDV G +G
Sbjct: 1020 FLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAGD 1079
Query: 305 DTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D S ++ + + D + + +N
Sbjct: 1080 DVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHDTIYE----SGGGHDTIRINAG 1135
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 1136 ADQLWFARQGNDLEIRILGTDDALTVHDWY 1165
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 8/131 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S + G D D V+N ++ S IG + N + Q
Sbjct: 746 YGFGIEADLSREWVRKASALGVDYYD-----NVRNVENVIGTSMKDVLIGDAQANTLMGQ 800
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V G G+D++ G N++ + +GND G G DT A + + +
Sbjct: 801 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREH 859
Query: 325 IIVYDANEHKQ 335
++ +
Sbjct: 860 DVLRGGDGVDT 870
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N SG+D DG +G DT ++ +
Sbjct: 529 VQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQ 588
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 589 DLGVWSNQLDGGAGVDTVKY 608
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 26/152 (17%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 823 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQT 876
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGSSGNDVVIGNSA 285
G I L + +G + + A TV IE+VVG+ D + G++
Sbjct: 877 GAHAGIAAGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 934
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
NV + G DV G G D
Sbjct: 935 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLS 966
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 15/193 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 582 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 641
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GS ND + G+ +N + GND G G D L
Sbjct: 642 -NLFSVDHVKNIENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLG--LD 698
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D + + EY E DL +
Sbjct: 699 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREW 758
Query: 376 GQDVFESMKHFYE 388
+ +Y+
Sbjct: 759 VRKASALGVDYYD 771
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + + G +GND ++G N +G+DV DG
Sbjct: 540 SITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDG 599
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 600 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSR 659
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
Q + L + + G D+
Sbjct: 660 LNDRIAGDDQDNELWGHDGNDTIRGRGGDDIL 691
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G SG+D + G + N+ G + G +G D F +
Sbjct: 534 GGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVW 593
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 594 SNQLDGGAGVDTV 606
>gi|126176191|ref|YP_001052340.1| outer membrane adhesin like protein [Shewanella baltica OS155]
gi|125999396|gb|ABN63471.1| putative outer membrane adhesin like proteiin [Shewanella baltica
OS155]
Length = 2239
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 12/161 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G GND++ G N+ + +GND+ G +G DT + V+
Sbjct: 2057 DVLIGGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKLT-GGTGADTFVW 2115
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE------YTASYEDLIQVIGQDVFES 382
A E D ++D D + + + L+ +S +I +
Sbjct: 2116 QAGESGTDHITDFNIHEDKLDLRDLLQGENTNTLDSYLNFSLNSSGSTVIDIDANQDGVF 2175
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+H G++ FD Y + + GS+
Sbjct: 2176 EQHIILDGVN-----LFDEYGSTNDAGIINGLLGSNNDGPL 2211
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 7/141 (4%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N + + + G +GND++ G + N+ GND G +G DTF + A
Sbjct: 2061 GGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKLTGGTGADTFVWQAGES 2120
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N +++ +D L E D ++ S + + +D V
Sbjct: 2121 GTDHITDFN---IHEDKLDLRDLLQG-ENTNTLDSYLNFSLNSSGSTVIDIDANQD--GV 2174
Query: 375 IGQDVF-ESMKHFYEFGLSEG 394
Q + + + F E+G +
Sbjct: 2175 FEQHIILDGVNLFDEYGSTND 2195
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 79/247 (31%), Gaps = 37/247 (14%)
Query: 197 APKGSLGNNIYKIEV----QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + G + + +TI ++ G D L GG + + N
Sbjct: 1393 SNFKTSGITTEQFRTGDFTNAPFNTGTRTIDNTSGQDQL--LGTGGNDHLVSANGGGD-L 1449
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + ++ D + G + N+V GND G +G D
Sbjct: 1450 LYGMDGDDILVGSDAVQ-------GDSLYGGTGNDVLVAGLGNDGLYGGAGTDIAVLLGN 1502
Query: 313 SYLYKIYRFENAII--------VYDANEHKQDFLSDVERLRFAD------QCIDSVNVKQ 358
Y I + V + L D+E ++F D Q + ++
Sbjct: 1503 RADYIIEKGTGYSSNDRWFNFFVTENGIGVTKALHDIEYVQFKDGIYAINQITGELTLEP 1562
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ ++Y + + +D ES+ GL EG + LY S L +D
Sbjct: 1563 PTAVDYPIEIN--VSLADRDGSESIDSIQLSGLPEG------TLLY-SSNGTLMGTADAD 1613
Query: 419 RGAAARH 425
H
Sbjct: 1614 GNILLNH 1620
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ +D G LIGG N I + G N I ++++G GND +
Sbjct: 2045 SDFDQSGASDKADVLIGGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKL 2104
Query: 281 IGNSANNVFF---ESSGNDVF 298
G + + F SG D
Sbjct: 2105 TGGTGADTFVWQAGESGTDHI 2125
>gi|26249405|ref|NP_755445.1| hemolysin A [Escherichia coli CFT073]
gi|26109813|gb|AAN82018.1|AE016766_106 Hemolysin A [Escherichia coli CFT073]
Length = 1024
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G ++ + GND G G DT + +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKL 785
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
I N +L+ + D+ N +++L + L G D+ +
Sbjct: 786 IGGTGNN----YLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD ++ G N + ++ G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDHIE----GNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GN+ + G + NV GND GS G D + L K
Sbjct: 789 TGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 323 N 323
+
Sbjct: 849 D 849
>gi|58176944|pdb|1UTT|A Chain A, Crystal Structure Of Mmp-12 Complexed To 2-(1,3-Dioxo-1,3-
Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
gi|58176945|pdb|1UTZ|A Chain A, Crystal Structure Of Mmp-12 Complexed To
(2r)-3-({[4-[(Pyri
Din-4-Yl)phenyl]-Thien-2-
Yl}carboxamido)(Phenyl)propanoic Acid
gi|58176946|pdb|1UTZ|B Chain B, Crystal Structure Of Mmp-12 Complexed To
(2r)-3-({[4-[(Pyri
Din-4-Yl)phenyl]-Thien-2-
Yl}carboxamido)(Phenyl)propanoic Acid
Length = 159
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 58/189 (30%), Gaps = 49/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 4 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 56
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 57 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 115
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 116 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 149
Query: 188 IVAVQKIYG 196
I +Q +YG
Sbjct: 150 IRGIQSLYG 158
>gi|296534518|ref|ZP_06896938.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296265155|gb|EFH11360.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 1158
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G+D ++ + G IDL+ + S I G + IA+ TVIE +G G+D + GN
Sbjct: 466 DEAGEDRINAAAVSG-PVRIDLSGATESRIAGQR--LVIAEGTVIEHALGGDGDDWLGGN 522
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+A+N + G+D G G D A + + V + L
Sbjct: 523 AADNHLIGNRGSDTLRGLEGNDILEGGAGDD---LLIGDAGDDVLEGGPGADRMLGG 576
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 16/145 (11%)
Query: 265 HTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ + G +G+D + G ++ GND G SG D + Y + +
Sbjct: 807 GNALDNWLQGGAGDDWLEGGGGDDRLEGGHGNDFLKGGSGADVMLGGFGNDTYSVNDPRD 866
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD----------QCIDSVNVKQRSILEYTASYEDLIQ 373
I+V ++ S +E D + + + A L
Sbjct: 867 -IVVEHIHQGFDTVRSWIEDYALPDWVEVLELWGHVARNGTGNASHNRITGNALDNRLAG 925
Query: 374 VIGQDVFESMK--HFYEFGLSEGRD 396
G D+ M + E G EG D
Sbjct: 926 GAGNDMLYGMAGDDWLEGG--EGDD 948
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 9/140 (6%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+IY ++ ++ ++ G D + D L V+ + L G
Sbjct: 973 GNDIY--WLRDPRDRILE--FEGNGYDTVFAFVDTQLPAHVEALVLLGEAPLKGTGNRLD 1028
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I + G G+DV+IG + + G+D +G +G D A + +
Sbjct: 1029 NRIIGHDAG-SRLWGMGGDDVLIGGAGQDQLRGGEGDDWLEGGAGDDELAGGAGADRFVF 1087
Query: 319 YRFENAIIVYDANEHKQDFL 338
R + D N + D L
Sbjct: 1088 GRHFGQDRLLDFNPEEGDRL 1107
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 19/154 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN---YIDLNTESWSSIGGY 256
G G+++Y+++ +D+ Q + G D + ++ + ++L + G
Sbjct: 575 GGAGDDLYRVD-DPRDAVIEQ---EGEGYDTVRASIDYALPAHVERLELLPGARIGAGNA 630
Query: 257 EKNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N+ I + + + G +G+DV+ G + +G+D G +G D
Sbjct: 631 LGNVIIGHDGGVRLLGLAGDDVLRGGAGDDVLEGGEGQDRLEGGAGDDRLLGGAGNDLLL 690
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ D L E
Sbjct: 691 GGEGRD----WLEGGGGGDRLEGGAGDDHLFGQE 720
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 9/142 (6%)
Query: 203 GNNIYKIEV---------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
GN+ Y + Q I D D +++ + G S + I
Sbjct: 855 GNDTYSVNDPRDIVVEHIHQGFDTVRSWIEDYALPDWVEVLELWGHVARNGTGNASHNRI 914
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + +A + + G +G+D + G ++ SG+DV DG +G D +
Sbjct: 915 TGNALDNRLAGGAGNDMLYGMAGDDWLEGGEGDDWLIGGSGHDVLDGGAGFDRMHGGPGN 974
Query: 314 YLYKIYRFENAIIVYDANEHKQ 335
+Y + + I+ ++ N +
Sbjct: 975 DIYWLRDPRDRILEFEGNGYDT 996
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 37/127 (29%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------------- 296
+ G + + + + G +G+D ++G + N++ G D
Sbjct: 653 LRGGAGDDVLEGGEGQDRLEGGAGDDRLLGGAGNDLLLGGEGRDWLEGGGGGDRLEGGAG 712
Query: 297 --------------------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+G G D A +Y + +V A E
Sbjct: 713 DDHLFGQEGDDILLGGGGRDRLNGGGGADWMEGGAGDDVYWV-DHPGDRVVERAGEGHDR 771
Query: 337 FLSDVER 343
++ ++
Sbjct: 772 VVASIDY 778
>gi|301631743|ref|XP_002944955.1| PREDICTED: matrix metalloproteinase-21-like, partial [Xenopus
(Silurana) tropicalis]
Length = 409
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 51 AQEVARWALG--EWSKVVDLTFEE--TSIHSDIKFISSNNGYVC-TPRYDS--------R 97
Q+ A AL WS+VV L F E T DI+ ++ + +D
Sbjct: 181 QQQRAILALAFRMWSEVVPLLFVEDLTGDDIDIRIGFGTGQHLGCSQAFDGVGQQFAHAW 240
Query: 98 YFMEINFDKADVW-RYGIGKGTILSHNALHEIGHALGLMH 136
Y +I+FD + + G L A+HEIGHALGL H
Sbjct: 241 YLGDIHFDDDEHFVGPSSEHGISLLKVAVHEIGHALGLSH 280
>gi|301017935|ref|ZP_07182560.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 69-1]
gi|300399930|gb|EFJ83468.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 69-1]
Length = 1024
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G ++ + GND G G DT + +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKL 785
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
I N +L+ + D+ N +++L + L G D+ +
Sbjct: 786 IGGTGNN----YLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD ++ G N + ++ G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDHIE----GNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GN+ + G + NV GND GS G D + L K
Sbjct: 789 TGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 323 N 323
+
Sbjct: 849 D 849
>gi|320638321|gb|EFX08041.1| hypothetical protein ECO5101_06994 [Escherichia coli O157:H7 str.
G5101]
Length = 1223
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 999 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 1052
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 1053 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 1112
Query: 319 YRFENAII 326
+ ++
Sbjct: 1113 GGNGSDVV 1120
>gi|325982594|ref|YP_004294996.1| outer membrane adhesin like protein [Nitrosomonas sp. AL212]
gi|325532113|gb|ADZ26834.1| outer membrane adhesin like proteiin [Nitrosomonas sp. AL212]
Length = 1060
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 11/177 (6%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ + TL V+N I + + G + N TI + + G +GND ++G + +
Sbjct: 787 NSSVTYTLPNNVENLILRGALAINGTGNGQAN-TITGNAANNVLKGGAGNDNLLGGAGMD 845
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII------VYDANEHKQDFLSD- 340
+G D DG G D+ + + Y + ++II + N + D
Sbjct: 846 TLEGGTGRDTLDGGFGADSLKGGSGNDNYGVDNAGDSIIEAAGGGIDGVNSSVTYAIPDP 905
Query: 341 VERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEG 394
VE L + Q +I+ L G D+ + + GL
Sbjct: 906 VENLTLTGTSALNGTGNSQANIIIGNTGNNQLKAAAGNDILDGRQGTDLLTGGLGND 962
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 12/167 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH----TVIESVVGSSGNDVVI 281
G D+L+ + + +Y + T S+ + T+ + IE+++GS+ D +
Sbjct: 672 GNDNLVGTSSLNDTASYENATTSVTVSLNIATQQNTLGAGLDTLSKIENLIGSNFADHLT 731
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII------VYDANEHKQ 335
GN+A+N+ GNDV G SG DT + Y + + +I + N
Sbjct: 732 GNTASNILQGRLGNDVLTGWSGADTLIGGPGNDSYFVEIAGDVVIEAFNEGIDSVNSSVT 791
Query: 336 DFL-SDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L ++VE L I+ Q + + A+ L G D
Sbjct: 792 YTLPNNVENLILRGALAINGTGNGQANTITGNAANNVLKGGAGNDNL 838
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 27/198 (13%)
Query: 199 KGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLD-------LTLIGGVKNYI----- 243
G+ NN+ K + + T+ G D LD L G NY
Sbjct: 821 TGNAANNVLKGGAGNDNLLGGAGMDTLEGGTGRDTLDGGFGADSLKGGSGNDNYGVDNAG 880
Query: 244 -DLNTESWSSIGGYEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFES 292
+ + I G ++T A +E+ + +GN +++IGN+ NN +
Sbjct: 881 DSIIEAAGGGIDGVNSSVTYAIPDPVENLTLTGTSALNGTGNSQANIIIGNTGNNQLKAA 940
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND+ DG G D + +++ + D N D + + A
Sbjct: 941 AGNDILDGRQGTDLLTGGLGNDIFRFTTLGQTDTITDFN-VINDTIQLENAVFTALTATG 999
Query: 353 SVNVKQRSILEYTASYED 370
++ + I D
Sbjct: 1000 TLAAGRFRIGANALDAND 1017
>gi|56681778|gb|AAW21425.1| leukotoxin A [Pasteurellaceae bacterium I43]
Length = 385
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 229 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 288
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 289 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 325
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 217 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 273
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 274 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 318
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 215 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 270
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 271 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 330
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 331 LVITNTKQEKVTI--QNWFREAEFAKTIQNYVATRDDKIEEIIGQNGERI 378
>gi|119492945|ref|ZP_01623975.1| hypothetical protein L8106_26497 [Lyngbya sp. PCC 8106]
gi|119452871|gb|EAW34045.1| hypothetical protein L8106_26497 [Lyngbya sp. PCC 8106]
Length = 1422
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 8/134 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGDDL+ + + N + S + G+++N I + + + G G+D + G+
Sbjct: 31 GGDDLI---FGAEADDQLFGNEGADS-VYGHQENDIIYGGSGADFLFGGQGDDSIFGDEG 86
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ + G D+ G G D F + + + + +D + + L
Sbjct: 87 NDRIYADRGTDILIGGEGEDVFILEIGTGDFSVTTTNLIVDF----NVDEDQIELQDGLT 142
Query: 346 FADQCIDSVNVKQR 359
F D I+
Sbjct: 143 FEDVNIERTPEGDS 156
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L S S I G + I + + G+ G D V G+ N++ + SG D G G
Sbjct: 18 LVGTSGSDQILGLGGDDLIFGAEADDQLFGNEGADSVYGHQENDIIYGGSGADFLFGGQG 77
Query: 304 LDTFFYYAPSYLYKIYRFENAII 326
D+ F + R + +I
Sbjct: 78 DDSIFGDEGNDRIYADRGTDILI 100
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 14/94 (14%)
Query: 259 NMTIAQHT-VIESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFF 308
++ I T + ++G G+D++ G A++ F + G ND+ G SG D F
Sbjct: 14 DVNILVGTSGSDQILGLGGDDLIFGAEADDQLFGNEGADSVYGHQENDIIYGGSGADFLF 73
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
F + + D L E
Sbjct: 74 GGQGDDS----IFGDEGNDRIYADRGTDILIGGE 103
>gi|189347155|ref|YP_001943684.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
gi|189341302|gb|ACD90705.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
Length = 824
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 24/206 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT------------LIGGVKNYIDLN 246
G G++ Y I+ ++ G D + + ++ G
Sbjct: 454 SGGSGDDTYYID--NSKDTVYES--SGAGTDTVHSSINYTLRTNFEHLVLSGTSAINATG 509
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++I G + N I+ + + G+ GND + G + ++V + GND +G G +T
Sbjct: 510 NSAENNITGNDANNIISGGAGNDVLTGNGGNDRLNGQTGDDVLYGGGGNDTLNGGDGNET 569
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-------DVERLRFADQ-CIDSVNVKQ 358
+ + LY + ++ D + + + + VE + F ++ Q
Sbjct: 570 LYGGDGNDLYYVSSSGTILVEEDVSGYDTVYTTVNYLLPEYVESMLFMGSFSLEGTGNGQ 629
Query: 359 RSILEYTASYEDLIQVIGQDVFESMK 384
++L ++ + + G D
Sbjct: 630 DNLLTGNSAENSINGLGGNDTLNGAA 655
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 6/139 (4%)
Query: 244 DLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
D T W+ + G + N + + +++ G SGND++ G +++ + G+D G
Sbjct: 171 DFITGEWTDDYLFGLDGNDMLYSYEGNDTIEGGSGNDLIDGGLDHDLLYGGEGDDTVYGG 230
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQR 359
D +Y S IY +A + + QD L + + +D++
Sbjct: 231 VYFDYSWYGWMSGDDSIY--GDAGNDFLDGSYGQDILDGGAGDDILHGGSGLDTLTGGNG 288
Query: 360 SILEYTASYEDLIQVIGQD 378
+ Y Y+D + +
Sbjct: 289 NDTLYGGEYDDTLGGGAGN 307
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 233 LTLIGGVKNYIDLNTE--SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+L G +L T + +SI G N T+ + ++G +GND++ G S N++
Sbjct: 620 FSLEGTGNGQDNLLTGNSAENSINGLGGNDTLNGAAGNDILLGGAGNDLLEGVSGNDILL 679
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYL 315
G D+ G SG D + A
Sbjct: 680 GEEGADILKGGSGADALYGDAGDDT 704
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 78/251 (31%), Gaps = 37/251 (14%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL H Y G Y + S+ MS DA + DI+
Sbjct: 212 GLDHDLLYGGEGDDTVYGGVYFDYSW-YGWMS--GDDSIYGDAGNDFLDGSYGQDIL--- 265
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI---- 243
G G++I + T+ G+D L D TL GG N +
Sbjct: 266 ------DGGAGDDI------LHGGSGLDTLTGGNGNDTLYGGEYDDTLGGGAGNDLLYGM 313
Query: 244 --DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ S + G + + T+ + + G GND + G +++ +D DGS
Sbjct: 314 DEQFDEYSSDLLHGDDGDDTLYGGNGQDQLYGGIGNDTLDGGDGSDMLDGGDDHDSLDGS 373
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D A + +VYD + +LS + L +
Sbjct: 374 LGNDMIIGSAGNDTLS------GGMVYDDDFQG--WLSGDDTLYGDSGFDSLDGGAGNDL 425
Query: 362 LEYTASYEDLI 372
L + L
Sbjct: 426 LSGGEDNDTLS 436
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 36/211 (17%)
Query: 205 NIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMT 261
+Y Q + I T+ G D+LD G ++ L+ + I G N T
Sbjct: 333 TLYGGNGQDQLYGGIGNDTLDGGDGSDMLD-----GGDDHDSLDGSLGNDMIIGSAGNDT 387
Query: 262 IAQHTVIESVVGS--SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY---------- 309
++ V + SG+D + G+S + +GND+ G DT
Sbjct: 388 LSGGMVYDDDFQGWLSGDDTLYGDSGFDSLDGGAGNDLLSGGEDNDTLSGGAGDDMLDGG 447
Query: 310 ------YAPSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLRFADQC-IDS 353
S Y + VY+++ D + ++ E L + I++
Sbjct: 448 GGIDSMSGGSGDDTYYIDNSKDTVYESSGAGTDTVHSSINYTLRTNFEHLVLSGTSAINA 507
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + G DV
Sbjct: 508 TGNSAENNITGNDANNIISGGAGNDVLTGNG 538
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 8/121 (6%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G+ G+D + G ++ F GND+ G DT + + L
Sbjct: 157 YGDHLGVLTGTDGDDFITGEWTDDYLFGLDGNDMLYSYEGNDTIEGGSGNDLID----GG 212
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D + ++ + + A + L GQD+ +
Sbjct: 213 LDHDLLYGGEGDDTVYGGVYFDYS----WYGWMSGDDSIYGDAGNDFLDGSYGQDILDGG 268
Query: 384 K 384
Sbjct: 269 A 269
>gi|163745460|ref|ZP_02152820.1| type I secretion target repeat protein [Oceanibulbus indolifex
HEL-45]
gi|161382278|gb|EDQ06687.1| type I secretion target repeat protein [Oceanibulbus indolifex
HEL-45]
Length = 308
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 58/169 (34%), Gaps = 5/169 (2%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSS-IGGYEKNMT 261
Y + ++ G+D L G DL + + + G+ +
Sbjct: 67 YGGNDLLHGAGGDDDLHGQDGNDTLRGDDGNDRMHGNDGDDDLFGGAGNDSLFGHNGDDF 126
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ GS+G+D++ G++ ++ G+D G +G DT F
Sbjct: 127 LYGGAGDDALQGSAGDDLLNGDAGDDALQGGLGDDALRGGNGEDTLFGGWGDDTLTGADD 186
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
E + + ++ + + + + D + + + A D
Sbjct: 187 EQSRDYLNGGGGDDLIVAGAQDVVTSGEGTDQIVLGDWIAEQGAAQIMD 235
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 39/134 (29%), Gaps = 1/134 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + + + + G+ G+D + G N+ GND G+ G D F A
Sbjct: 54 TVQGGSGNDQLGGYGGNDLLHGAGGDDDLHGQDGNDTLRGDDGNDRMHGNDGDDDLFGGA 113
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + A + + + L L + L
Sbjct: 114 GNDSL-FGHNGDDFLYGGAGDDALQGSAGDDLLNGDAGDDALQGGLGDDALRGGNGEDTL 172
Query: 372 IQVIGQDVFESMKH 385
G D
Sbjct: 173 FGGWGDDTLTGADD 186
Score = 40.9 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 27/107 (25%), Gaps = 1/107 (0%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D++ G+ SGND G G D + + D N+
Sbjct: 44 DILTGSDDGETVQGGSGNDQLGGYGGNDLLHGAGGDDDLHGQDGNDTLRGDDGNDRMHGN 103
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + A L A + L G D+
Sbjct: 104 DGDDDLFGGAGND-SLFGHNGDDFLYGGAGDDALQGSAGDDLLNGDA 149
>gi|21654707|gb|AAK64605.1| stromelysin-1 [Felis catus]
Length = 393
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 54/193 (27%), Gaps = 52/193 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE----------- 71
W + Y+ T AL W +V LTF
Sbjct: 45 WRKTHLTYRIVNYTPDLPR-------EAVDSAFEKALKAWEEVTPLTFSKIYEGEADVMI 97
Query: 72 --ETSIHSD-IKFISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D I F N G+ P + +FD + W GT L A H
Sbjct: 98 FFAVRDHGDFIPFDGPGNILGHAYAPGPGING--DAHFDDDEQWTKDT-SGTNLFLVAAH 154
Query: 127 EIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E+GH+LGL H YPVY D
Sbjct: 155 ELGHSLGLYHSADPTALMYPVYNPRTDLTRFRLA-------------------------Q 189
Query: 186 SDIVAVQKIYGAP 198
D+ +Q +YG P
Sbjct: 190 DDVNGIQSLYGPP 202
>gi|67921335|ref|ZP_00514854.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
gi|67857452|gb|EAM52692.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
Length = 119
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ GND + GN+ N+ G+D+ G +G D + + ++ + ++D
Sbjct: 4 GNDGNDTLTGNAGNDDLRGGIGDDILRGGAGDDNLRGGSGNDIFNFSANQGRDRIWDFEL 63
Query: 333 HKQDFLSDV-----ERLRFADQCIDSVNVKQR 359
+ L D+ E + + Q
Sbjct: 64 GDKIRLKDINPQSLELIELNGNTFLDLGNNQG 95
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ G++GND + G +++ +G+D G SG D F + A +I+ F
Sbjct: 2 IEGNDGNDTLTGNAGNDDLRGGIGDDILRGGAGDDNLRGGSGNDIFNFSANQGRDRIWDF 61
Query: 322 E 322
E
Sbjct: 62 E 62
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ GN N+ ++GND G G D A + + I + +D +
Sbjct: 2 IEGNDGNDTLTGNAGNDDLRGGIGDDILRGGAGDDNLRGGSGND--IFNFSANQGRDRIW 59
Query: 340 DVE 342
D E
Sbjct: 60 DFE 62
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--GSSGLDTFF 308
I G + N T+ + + + G G+D++ G + ++ SGND+F+ + G D +
Sbjct: 2 IEGNDGNDTLTGNAGNDDLRGGIGDDILRGGAGDDNLRGGSGNDIFNFSANQGRDRIW 59
>gi|300867548|ref|ZP_07112198.1| hypothetical protein OSCI_3410019 [Oscillatoria sp. PCC 6506]
gi|300334436|emb|CBN57368.1| hypothetical protein OSCI_3410019 [Oscillatoria sp. PCC 6506]
Length = 528
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 76/207 (36%), Gaps = 23/207 (11%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL- 231
AS +T +++ V Q G +NI + T+ +G D L
Sbjct: 296 ASAEQNSTFQITEAVMDQYPGGILGTESNDNIIGSPATDVVLAAEGADTLEGAGDGDYLL 355
Query: 232 ----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D ++G N I + G + N ++ + V G GND + G+ +
Sbjct: 356 GGKGDDRILGEDSNDI---------LSGNQGNDFVSGGVADDLVRGGKGNDQIFGDDGED 406
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-----SDVE 342
+ G D G G D F + + + NA + D N + D + ++
Sbjct: 407 ILIGERGTDRLTGGGGSDIFILRTDTGIEETNPA-NADWLLDFNASEGDLIGINGGVPID 465
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYE 369
L F+ ++ + +I++YT + E
Sbjct: 466 ILTFSPTDVNQDGI-ADTIIQYTETNE 491
>gi|217978872|ref|YP_002363019.1| glycosyl transferase group 1 [Methylocella silvestris BL2]
gi|217504248|gb|ACK51657.1| glycosyl transferase group 1 [Methylocella silvestris BL2]
Length = 1220
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/316 (21%), Positives = 110/316 (34%), Gaps = 61/316 (19%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR------- 395
+ FA + + S ++ + Y Y DL + + +H+ G EGR
Sbjct: 12 SIPFA-KSLKSSDLLDFDPVFYRFHYSDLHGL--NSDEDLRRHYVLHGREEGRWKSRAEA 68
Query: 396 --DIT---------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR------NP- 437
D F +++Y ++DL F + HY+ HG KEGR NP
Sbjct: 69 RNDFVSRFGALPDDFQAHVYKELHEDLAKAFDHEWQFEF-HYLEHGRKEGRRYKREGNPA 127
Query: 438 -DAFKALEYIASHEDLINAFADA----PDLVQVGKDHFSNFGCEE----GRFVTFDSYLY 488
DA + + D + + P Q G F G E FD Y
Sbjct: 128 GDAETSWITLFRLGDFVACAQNWLTEVPRTQQEGIALFLEAGIERLAPINLDFVFDPEFY 187
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE-------YIASHEDLINAFA 541
+Y RN + RH++ G+ G +P+ K+L+ Y + D +
Sbjct: 188 RSAYGFERNKRDVEL---YRHWLEIGMPNGLSPNEEKSLQDLLPSRRYPEAF-DWRRYKS 243
Query: 542 DAPDLVQAG-------KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
P G H G+E+G + N D S D+L+ G +H
Sbjct: 244 TLPTRASEGLRHRIDVLRHLFQTGFEKGLTNQINGD----SSDELFAAIGDYHLIRGRHR 299
Query: 595 ITHGMKEGRALGISGM 610
+ RAL ++ +
Sbjct: 300 LAIAAY-NRALALNPL 314
>gi|119494066|ref|ZP_01624618.1| hypothetical protein L8106_04231 [Lyngbya sp. PCC 8106]
gi|119452203|gb|EAW33405.1| hypothetical protein L8106_04231 [Lyngbya sp. PCC 8106]
Length = 298
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 72/191 (37%), Gaps = 9/191 (4%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS 252
+ I+ + I+ + G+D D L GG + +
Sbjct: 58 NNPDATIFGLSGNDSIFGGTGDNEIFGNEGNDTTYGLAGDDALYGGQGDDYLFGGDDDDR 117
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+A + +S+ G GND++ GN ++V + + GND+ G G DT F
Sbjct: 118 LQGDAGNDTLAGGSGNDSLFGGEGNDLLEGNDGDDVLYGNQGNDLLQGDGGSDTMFGGQG 177
Query: 313 SYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++++ N+ +D FA D+ + E A ++
Sbjct: 178 NDTLQGGDGGDSLLGDKGNDRLNGGTGTDTYAFTFAGGS-DADTIVAFESGETIALGGEV 236
Query: 372 IQVIGQDVFES 382
+G DV +
Sbjct: 237 FDALGGDVEAA 247
>gi|297690056|ref|XP_002822443.1| PREDICTED: matrilysin-like [Pongo abelii]
Length = 267
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 68/214 (31%), Gaps = 48/214 (22%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP +A++ L W++ + Y+ T + L AL W
Sbjct: 84 KPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRL-------VSKALNMW 136
Query: 63 SKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRY-------------FMEINFDKAD 108
K + L F + +DI + + +D + +FD+ +
Sbjct: 137 GKEIPLHFRKVVWGTADIMIGFARGAHGDAYPFDGPGNTLAHAFAPGKGLGGDAHFDEDE 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
W G G + A HE+GH+LG+ H N VM Y P
Sbjct: 197 RWTDGSSLGINFLYAATHELGHSLGMGHSSDPNA-------------------VM-Y--P 234
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
D + DI +QK+YG S
Sbjct: 235 TYGNGDPQHFKLSQ---DDIKGIQKLYGKKSNSR 265
>gi|288575653|ref|ZP_06393870.1| iron-regulated protein FrpC [Neisseria mucosa ATCC 25996]
gi|288567421|gb|EFC88981.1| iron-regulated protein FrpC [Neisseria mucosa ATCC 25996]
Length = 204
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 2/163 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D+ G +Y+ + G E N ++ ++++ G++GND + G
Sbjct: 19 GWDTADVLDGGKGNDYLSGYNGDD-LLKGGEGNDSLYGGEGVDTLEGNAGNDYLSGEKGA 77
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ GND G G D A E V++ H +D +SD L
Sbjct: 78 DILKGGEGNDELHGGEGSDILNGGAGDDRLYGGSSEADTYVFE-KGHGKDVVSDYGSLLE 136
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ N + + +++ G D S+++++
Sbjct: 137 HTDTLLFENAVFSDAVFSRLGNDLVVKAYGGDDQVSLQNYFSS 179
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 14/142 (9%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG+ GN+ + G +V GND G +G D + + +
Sbjct: 9 VGTDGNESLYGWDTADVLDGGKGNDYLSGYNGDDLLKGGEGNDSL----YGGEGVDTLEG 64
Query: 332 EHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D+LS + L+ + + + IL A + L S Y
Sbjct: 65 NAGNDYLSGEKGADILKGGEGNDELHGGEGSDILNGGAGDDRLYG------GSSEADTYV 118
Query: 389 FGLSEGRDITFDSYLYLGSYDD 410
F G+D+ D Y L + D
Sbjct: 119 FEKGHGKDVVSD-YGSLLEHTD 139
>gi|284042067|ref|YP_003392407.1| Hemolysin-type calcium-binding region [Conexibacter woesei DSM
14684]
gi|283946288|gb|ADB49032.1| Hemolysin-type calcium-binding region [Conexibacter woesei DSM
14684]
Length = 546
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 28/160 (17%)
Query: 214 KDSPFIQTIYDSGGDDLLDL------TLIGGVKNYIDLNTESWSS------------IGG 255
+ + + GGDDL+D T+ GG N I ++ S +
Sbjct: 220 QGNDGADVVAGFGGDDLVDGGEGPNGTISGGDGNDI-VSPGSVTDPVDGGAGRDLLSYAN 278
Query: 256 YEKNMTIA-QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ +++ + T E++ G+ +DV+ G+ N F GND DG G D F
Sbjct: 279 FASGVSVGLEGTGAENLDGTRFDDVLHGDDGPNTIFGLEGNDQIDGRGGTDDLFGGFGED 338
Query: 315 LYKIYRFE--------NAIIVYDANEHKQDFLSDVERLRF 346
+ E A A++ D LS E + F
Sbjct: 339 TLQARDGEADTAECGPGADDTVTADQLGLDLLSGCETVIF 378
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 3/102 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+S S+ GG + + + GS GND +IG + + G DV G G D
Sbjct: 180 PDSLSAQGGRGTGGPLTRGITL---FGSDGNDALIGGDRADELQGNDGADVVAGFGGDDL 236
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
N I+ + D + + L +A+
Sbjct: 237 VDGGEGPNGTISGGDGNDIVSPGSVTDPVDGGAGRDLLSYAN 278
>gi|220927083|ref|YP_002502385.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
gi|219951690|gb|ACL62082.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
Length = 615
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 3/145 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G++ N ++ + ++V G +GND++IG N+ GND G G D+ F
Sbjct: 359 IHGFDNNDSLYGDSGNDTVFGDAGNDLLIGGGGNDELRGFLGNDTLFGEYGNDSLFGEQD 418
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI-LEYTASYEDL 371
+ L R ++ N+ + + F D+ D V+ + + + L
Sbjct: 419 NDLIDGGRGDDFASGGSGNDEVRGAAGN--DHLFGDEGDDRVDGGEGDDQVRGWFGNDTL 476
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRD 396
G D + G G D
Sbjct: 477 FGSEGNDQVFGEEDDDFLGAGSGND 501
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + + + + + G G D + G N++ F ++GND G +G DTF +
Sbjct: 485 VFGEEDDDFLGAGSGNDYLSGGLGTDSLYGEDGNDLLFGNAGNDELVGGAGSDTFGFGRG 544
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
I F D + ++ A Q + + V
Sbjct: 545 DGQDLIRDFVTGGPERDVIAFNGGVFTSFAAVQAASQQVGADVVITYGA 593
>gi|149756826|ref|XP_001493989.1| PREDICTED: matrix metallopeptidase 17 (membrane-inserted) [Equus
caballus]
Length = 579
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 31 KPDVLTTHRLSFDITEL---NPNAQEVAR----WALGEWSKVVDLTFEETSIHS-DIKFI 82
P + LS+ + +P ++ R +AL WS + L F E + + DI+
Sbjct: 104 APTRWSKRNLSWRVRTFPRDSPLGRDTVRALMHYALKVWSDITPLNFHEVAGSAADIQID 163
Query: 83 SSNNGYVCTPRYDSRYF--------------MEINFDKADVWRY--GIGKGTILSHNALH 126
S + +D + +FD + W + G L A+H
Sbjct: 164 FSKADHNDRYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSADAHGMDLFTVAVH 223
Query: 127 EIGHALGLMH 136
E GHA+GL H
Sbjct: 224 EFGHAIGLSH 233
>gi|26988517|ref|NP_743942.1| glycosyl transferase, putative [Pseudomonas putida KT2440]
gi|24983284|gb|AAN67406.1|AE016367_6 glycosyl transferase, putative [Pseudomonas putida KT2440]
Length = 1147
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 66/228 (28%), Gaps = 46/228 (20%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA--------------- 439
R D Y Y DL + A +H+ G +EGR A
Sbjct: 33 RRFVLDLAYYRNRYPDLSS---LTDDALEQHWHAFGHQEGRYASASHESGDAELIAEAVL 89
Query: 440 ---------------FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
Y+ + DL + + + HF FG EGR T D
Sbjct: 90 NAADSAVMVKPDVAKVDLDFYLTFYPDLKAG---GVETQAIAEAHFQRFGRAEGRLPTLD 146
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
++ G AA I K G + + + + + A+ P
Sbjct: 147 AWAKKHELPLELLPNGFSLSAA----IDRSAKRGLEVEPQRVMGIFLGQDVIPIDLAETP 202
Query: 545 D-----LVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
+ G + S +EGR I L + +++N G
Sbjct: 203 QKSQLVFSKLGMHYLSRHKVQEGR-ILLEAALSIAPSAEVFNRLGGSY 249
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 43/131 (32%), Gaps = 16/131 (12%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
R D Y Y DL ++ A +H+ G +EGR A E +
Sbjct: 33 RRFVLDLAYYRNRYPDLSSLTDD---ALEQHWHAFGHQEGRYA---SASHESGDAELIAE 86
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
A +A D K + D YLT Y DL ++ A H+ G
Sbjct: 87 AVLNAADSAVMVKP----------DVAKVDLDFYLTFYPDLKAGGVETQAIAEAHFQRFG 136
Query: 599 MKEGRALGISG 609
EGR +
Sbjct: 137 RAEGRLPTLDA 147
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 76/273 (27%), Gaps = 62/273 (22%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--------------------- 398
+ Y Y DL + +H++ FG EGR +
Sbjct: 38 DLAYYRNRYPDLSSLTD---DALEQHWHAFGHQEGRYASASHESGDAELIAEAVLNAADS 94
Query: 399 ----------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY--- 445
D YL Y DL+ + A H+ G EGR P A
Sbjct: 95 AVMVKPDVAKVDLDFYLTFYPDLKAGGVETQAIAEAHFQRFGRAEGRLP-TLDAWAKKHE 153
Query: 446 ----IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ + ++A D + + G G+ V L +
Sbjct: 154 LPLELLPNGFSLSAAIDRSAKRGLEVEPQRVMGIFLGQDVIPID---LAETPQKSQLV-- 208
Query: 502 DRGAAARHYIT-HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
HY++ H V+EGR +A IA ++ N + + G+
Sbjct: 209 -FSKLGMHYLSRHKVQEGR--ILLEAALSIAPSAEVFNRLGGS----------YMEDGHF 255
Query: 561 EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
FN L +W F A H
Sbjct: 256 SIALQYFNAAAQL-PNPPVWTAFNQAHCLAKLH 287
>gi|5542534|pdb|3AYK|A Chain A, Catalytic Fragment Of Human Fibroblast Collagenase
Complexed With Cgs-27023a, Nmr, Minimized Average
Structure
gi|5542566|pdb|4AYK|A Chain A, Catalytic Fragment Of Human Fibroblast Collagenase
Complexed With Cgs-27023a, Nmr, 30 Structures
gi|157830144|pdb|1AYK|A Chain A, Inhibitor-Free Catalytic Fragment Of Human Fibroblast
Collagenase, Nmr, 30 Structures
gi|157831323|pdb|1HFC|A Chain A, 1.56 Angstrom Structure Of Mature Truncated Human
Fibroblast Collagenase
gi|157834633|pdb|2AYK|A Chain A, Inhibitor-Free Catalytic Fragment Of Human Fibroblast
Collagenase, Nmr, Minimized Average Structure
gi|157836376|pdb|2TCL|A Chain A, Structure Of The Catalytic Domain Of Human Fibroblast
Collagenase Complexed With An Inhibitor
gi|999357|gb|AAB34887.1| truncated mature collagenase, mCL-t [human, fibroblast, Peptide
Recombinant Partial, 169 aa]
Length = 169
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 57/194 (29%), Gaps = 49/194 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 8 RWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTPLTFTKVSEGQADIM 60
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A HE
Sbjct: 61 ISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLHRVAAHE 119
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M +F D
Sbjct: 120 LGHSLGLSHSTDIGA-------------------LM--------YPSYTFSGDVQLAQDD 152
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG +
Sbjct: 153 IDGIQAIYGRSQNP 166
>gi|332257486|ref|XP_003277835.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-21-like
[Nomascus leucogenys]
Length = 532
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 45 TELNPN-AQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY- 98
++L+ + + A WS+V L F E + + DIK ++ PR
Sbjct: 150 SQLSAAEQRRIVALAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSG 209
Query: 99 --------FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + + G L A+HEIGH LGL P +Y G
Sbjct: 210 QEFAHAWRLGDIHFDDDEHFTPPTSDMGISLLKVAVHEIGHVLGL--PHTYRTG------ 261
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + +F SD A+QK+YG+
Sbjct: 262 -----------SIM---QPNYIPQEPAFE----LDWSDRKAIQKLYGS 291
>gi|154148762|ref|YP_001406981.1| Ig family protein [Campylobacter hominis ATCC BAA-381]
gi|153804771|gb|ABS51778.1| Ig family protein [Campylobacter hominis ATCC BAA-381]
Length = 2245
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ E + + + + G+ G+D + G N+ +GND G G DT+ +
Sbjct: 903 TFDAGEGSDIVFAGNKNDKIFGNDGDDTLYGEDGNDTLIGGTGNDTLQGGDGDDTYIFNL 962
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+IY I+ + +D L +
Sbjct: 963 GDGKDEIYESSGNDIIEFGDGISKDSLIVIRD 994
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 44/117 (37%), Gaps = 4/117 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY+++ T + V + ND + GN ++ + GND G +G DT
Sbjct: 895 IRGYDEDFTFDAGEGSDIVFAGNKNDKIFGNDGDDTLYGEDGNDTLIGGTGNDTLQGGDG 954
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
Y + +Y+++ D + + + + + + + ++ Y
Sbjct: 955 DDTYIFNLGDGKDEIYESS--GNDIIEFGDGI--SKDSLIVIRDGENNLKIYVKDNP 1007
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + G + N I + I G+ G+D + G S ++ + G+D+ G+SG D
Sbjct: 726 SEVYGNDGNDKIIANGTI---YGNEGDDTLKGYSGDDTIYGGEGDDILIGASGDDFLQGD 782
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ Y + + + + + D + + + D
Sbjct: 783 SGDDTYVFGKEWGNDTINNFDRNGTDKIKFTDGISKYD 820
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 35/92 (38%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S G E + TI +++ G+ G+D + G N+ +GND G G D + +
Sbjct: 1227 SYIGKESDDTIYGLNSNDTIKGNDGDDTLYGEDGNDTLIGGTGNDKLIGGKGDDIYIFNL 1286
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+IY + +D L +
Sbjct: 1287 GDGKDEIYEESGNDTIEFGKGISKDSLIVIRD 1318
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 20/159 (12%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSG---------GDDLLD-LTLIGGVKNYIDLNT 247
L N YKI + D TI+D G D D L+ G + I ++
Sbjct: 1753 NHFFLSNRYYKINSIEFDDG---TIWDEKYIDHNAVYYGSDANDELSGYMGNDDIIKADS 1809
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSG------NDVVIGNSANNVFFESSGNDVFDGS 301
+ +I G++ + I + + G +G ND + G + N+ GND +G
Sbjct: 1810 GND-TIYGFDGDDEIYGEDGDDYLSGGNGIEKNTGNDKLYGGAGNDQLRGEDGNDYLNGG 1868
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
SG D ++Y I + +D LS
Sbjct: 1869 SGDDRYYYSYGDGFDTIENEGGGSDSLIFFDITRDRLSF 1907
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 10/125 (8%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DD+L+L+ + G +L +N + + + G G+D++ G+S ++
Sbjct: 105 DDILNLSPLKGSDEADNL--------YLTNENDILNAGNGNDEIHGKKGDDIINGDSGDD 156
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
F GND+ +G +G D + + Y + + D + + ++ +
Sbjct: 157 RLFGGIGNDILNGGTGNDELYGEDGNDTYVFSKNWGKDTIVD--NQGLNSIEFIDGINVN 214
Query: 348 DQCID 352
D D
Sbjct: 215 DLVFD 219
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 228 DDLLDLTLIGGVKNYIDLN--TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
+D+ L+LI + L + ++I G + + TI + +++ +GND + S
Sbjct: 1054 NDIKKLSLINSSNSTETLRGYDDENNNIVGNDADETIYGGELDDTINAGAGNDTITAYSG 1113
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDF 337
N SG+DVF G +T+ + KI R ++ I ++ K D
Sbjct: 1114 KNTLIGGSGDDVFYGDQANNTYIFSKGDGNDKISGRSSDSTIKFEDGISKDDI 1166
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+S + ++D G + +I+L + ++ E + I
Sbjct: 392 FNGASINSKIDKIVFDDGSSIT--------NREFINL---AVANSSSNENDTLIGYFDDD 440
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GND +I N N+V +G+D G G DT+ + I +
Sbjct: 441 YVLDALDGNDTIITNGGNDVLIGGAGDDTLKGGKGNDTYKFELNHGKDIIEDNIGKETIV 500
Query: 329 DANEHKQDFL 338
K+D +
Sbjct: 501 INGRTKEDLI 510
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + ++ GND +I N +++ G+D G +G D + + I
Sbjct: 291 IGYNDHSYTINALDGNDTIITNIKDDILIGGKGDDTLIGKAGNDIYIFGKDFGNDTIIEE 350
Query: 322 ENA--IIVYDANEHKQDFL 338
N +I + K D L
Sbjct: 351 NNDKNVIKFTDGISKDDLL 369
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 19/181 (10%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES--VVGSSGND-VVIGNSA 285
D+ + I + I + S S N+ +A + E+ ++G +D V+
Sbjct: 390 DMFNGASINSKIDKIVFDDGS-SITNREFINLAVANSSSNENDTLIGYFDDDYVLDALDG 448
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ + GNDV G +G DT + YK I+ D + ++
Sbjct: 449 NDTIITNGGNDVLIGGAGDDTLKGGKGNDTYKFELNHGKDIIEDNIGKETIVING----- 503
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
K+ I Y A+ DLI + +S+ ++ + I FD Y+
Sbjct: 504 ---------RTKEDLIFTYDATTTDLIINYKDNKNDSIT-IKKWKYMDNLTIKFDDNSYI 553
Query: 406 G 406
Sbjct: 554 D 554
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 17/154 (11%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDLN 246
A + IYG N KD TIY GDD ++ G + I+ N
Sbjct: 1410 ADETIYGGELDDTINAGAG-NDTIKDLNGNNTIYAGIGDDTINANGTIYAGIGDDTINAN 1468
Query: 247 TE--SWSSIGGYEKNMTIAQHTVIESVVG------SSGNDVVIGNSAN-----NVFFESS 293
+ S + TI +++ +GND+V + N
Sbjct: 1469 GTIYAGSGNDTINASGTIYAEDGNDNINATGFIDAGNGNDIVTASDVYSSEEFNTIIGGK 1528
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G+D GS + + + +IY +
Sbjct: 1529 GDDELHGSYSNEKYIFSKGDGKDEIYENGGNDTI 1562
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 81/228 (35%), Gaps = 65/228 (28%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-----GNNIYK 208
ND+ S Y + ++A+ G+ +DIV +Y + + + G++ +
Sbjct: 1476 GNDTINASGTIYAEDGNDNINAT-GFIDAGNGNDIVTASDVYSSEEFNTIIGGKGDD--E 1532
Query: 209 IEVQQKDSPFIQT-------IYDSGGDDLLDLTLIGGVKNYI------------------ 243
+ + +I + IY++GG+D ++ +N I
Sbjct: 1533 LHGSYSNEKYIFSKGDGKDEIYENGGNDTIEFKNNLLKENLIVKRNGENDITIKFKDDQT 1592
Query: 244 --------------------------DLNTESWSSIG-----GYEKNMTIAQHTVIESVV 272
+ T +++ I G++++ TI + ++ +
Sbjct: 1593 DLITLKNVVYGNIISNQNTIENFTFANGETLTFNDIKKASMIGFDEDDTIKGYDDADNFI 1652
Query: 273 GSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+S G+D +IG N+ SGND G G DT+ + I
Sbjct: 1653 STSAGDDKIIGGIFNDTIIGGSGNDKLQGGDGDDTYIFNLGDGKDIIT 1700
Score = 45.1 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 63/214 (29%), Gaps = 14/214 (6%)
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+T +DI + I + + +TIY DD ++ G
Sbjct: 1373 STLNFNDIKKLSLINSSNSTETLRGYDDENNNIVGNDADETIYGGELDDTINAG--AGND 1430
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
DLN ++I + TI + I G+D + N + SGND +
Sbjct: 1431 TIKDLNGN--NTIYAGIGDDTINANGTI---YAGIGDDTINANG---TIYAGSGNDTINA 1482
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S T + + F +A D D S E D S
Sbjct: 1483 SG---TIYAEDGNDNINATGFIDAGNGNDIVT-ASDVYSSEEFNTIIGGKGDDELHGSYS 1538
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+Y S D I ++ F L E
Sbjct: 1539 NEKYIFSKGDGKDEIYENGGNDTIEFKNNLLKEN 1572
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 46/145 (31%), Gaps = 24/145 (16%)
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+T +DI + I + + +TIY DD ++
Sbjct: 1049 STLNFNDIKKLSLINSSNSTETLRGYDDENNNIVGNDADETIYGGELDDTIN-------- 1100
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVF 298
N TI ++ +++G SG+DV G+ ANN F + GND
Sbjct: 1101 --------------AGAGNDTITAYSGKNTLIGGSGDDVFYGDQANNTYIFSKGDGNDKI 1146
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFEN 323
G S T + I
Sbjct: 1147 SGRSSDSTIKFEDGISKDDIKVTRG 1171
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 22/157 (14%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------------NVFFESSGN 295
S ++ I + +V V GN N + SG+
Sbjct: 699 SDKATFKNGGVIYALDGDDEIVSVENKSEVYGNDGNDKIIANGTIYGNEGDDTLKGYSGD 758
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-----LRFADQC 350
D G G D + + ++ + E D +++ +R ++F D
Sbjct: 759 DTIYGGEGDDILIGASGDDFLQGDSGDDTYVF--GKEWGNDTINNFDRNGTDKIKFTDGI 816
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ R + + + I + + F+
Sbjct: 817 SKYDLIFARGVKNSDVTNDLFIYSKDKKNSIKITDFF 853
>gi|163849586|ref|YP_001637629.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|163661191|gb|ABY28558.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
Length = 357
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 62/177 (35%), Gaps = 18/177 (10%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
D M +DI IYG + ++ + IY GG D +
Sbjct: 113 YGDEGDDSIQGGMAADI-----IYGDSEVDGASD---GNDYIRGGEGADLIYGGGGADTI 164
Query: 232 DLTLIGGVKNY-----IDL----NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ G DL N S ++ G E N TI + + G + ND + G
Sbjct: 165 RGSYNDGSDKVYGGTGDDLIVYTNDLSAVTLYGDEGNDTINGGFGDDKIFGGADNDTLSG 224
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-FENAIIVYDANEHKQDFL 338
N+ +G D+ DG SG D + + ++ F N + + A+ D +
Sbjct: 225 GYGNDAIDGGTGADLLDGGSGADVLTGGSGADVFMFTTKFGNGNVDHIADFSTGDKI 281
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 12/157 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D + + G LN+ ++ G E + +I + + G S D + N
Sbjct: 88 GNDYV--SGGAGKDTLYFLNSLDGVALYGDEGDDSIQGGMAADIIYGDSEVDG--ASDGN 143
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ G D+ G G DT K+Y ++ N+ L +
Sbjct: 144 DYIRGGEGADLIYGGGGADTIRGSYNDGSDKVYGGTGDDLIVYTNDLSAVTL-------Y 196
Query: 347 ADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQDVFES 382
D+ D++N + A + L G D +
Sbjct: 197 GDEGNDTINGGFGDDKIFGGADNDTLSGGYGNDAIDG 233
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 4/129 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G+D + G++A++ + GND G G D + I +
Sbjct: 32 VKAGGGDDTIYGSTADDFIYGDGGNDTIFGGYGKD--YLSGGDGDDLITNGGQQPLHTGN 89
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ D + + + ++ + + + D + G
Sbjct: 90 DYVSGGAGKDTLYFLNSLDGVALYGDEGDDSIQGGMAADIIYGDSEVDGASDGNDYIRGG 149
Query: 391 LSEGRDITF 399
EG D+ +
Sbjct: 150 --EGADLIY 156
>gi|75910203|ref|YP_324499.1| phytase [Anabaena variabilis ATCC 29413]
gi|75703928|gb|ABA23604.1| Phytase [Anabaena variabilis ATCC 29413]
Length = 1844
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 54/197 (27%), Gaps = 49/197 (24%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-- 265
DSP TI GDD + + + N + + + G N T
Sbjct: 1610 GDGADTVDSPGNNTISTGNGDDTV-FVGSNASVSTGNGNDQVFIGVNGPASNTTANGGNG 1668
Query: 266 ----TVIES------------------------VVGSSGNDVVIGNSANNVFFESSG--- 294
TVIE+ G SGND + N + N SG
Sbjct: 1669 EDEITVIEAGGSNNLFGAAGNDTLQVIEGSRQFAFGGSGNDTLTSNGSYNRLNGGSGDDK 1728
Query: 295 -----NDVFDGSSGLDTFFYY--------APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
ND G G D F + + + + + + DF V
Sbjct: 1729 LFSSVNDSLFGGDGDDVLFAGQAGSNRLSGGAGADQFWIANGS--LPTSKNTVTDFAVGV 1786
Query: 342 ERLRFADQCIDSVNVKQ 358
+++ + +
Sbjct: 1787 DKIGLGGIGVTQFSALS 1803
>gi|157833825|pdb|1SLM|A Chain A, Crystal Structure Of Fibroblast Stromelysin-1: The C-
Truncated Human Proenzyme
Length = 255
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 52/190 (27%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 92 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 144
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 145 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 203
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 204 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 239
Query: 189 VAVQKIYGAP 198
+Q +YG P
Sbjct: 240 NGIQSLYGPP 249
>gi|323965177|gb|EGB60636.1| type 1 secretion protein [Escherichia coli M863]
Length = 3820
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + S
Sbjct: 3596 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSVTTAQATG 3649
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 3650 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 3709
Query: 319 YRFENAII 326
+ ++
Sbjct: 3710 GGNGSDVV 3717
>gi|220904393|ref|YP_002479705.1| outer membrane adhesin-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868692|gb|ACL49027.1| outer membrane adhesin like proteiin [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 2784
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 32/214 (14%)
Query: 189 VAVQKIYGAPK--GSLGNNIYKIEVQQK-----------DSPFIQTIYDSGGDDLL---- 231
+ +Q YG + G Y++++ + F T++D G + +
Sbjct: 2532 ITLQGQYGTLTIDSATGQYTYELDMSNPTVQHLGKGSTLNETFTTTVHD--GWETVNSKL 2589
Query: 232 ------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
D T+ G I S + + G + I E++ G GND++ G +
Sbjct: 2590 EITVNSDHTVKGLDTPGILYGDSSDNLLLGSGGDDIIKGGIGNEALFGGEGNDILYGGAG 2649
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-------KQDFL 338
N+ SG++ G G D + A + + + +I D + + +
Sbjct: 2650 NDYLDGGSGSNQLYGGEGNDVLVFSASNTVMDGGTGIDMMIGADKDTLDSLFANPATNTI 2709
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++E + ++ + E ++
Sbjct: 2710 QNIEIFVTEGGKGLTSLADLENLGVLLNNNEKIV 2743
>gi|126736251|ref|ZP_01751994.1| beta-lactamase, putative [Roseobacter sp. CCS2]
gi|126714417|gb|EBA11285.1| beta-lactamase, putative [Roseobacter sp. CCS2]
Length = 707
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 51/155 (32%), Gaps = 3/155 (1%)
Query: 230 LLDLTLIGGV-KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+D + GV ID + S ++ G I + V G++G D + G + ++
Sbjct: 537 TMDTSSDSGVIGAVIDGSDAS-ETLEGGAGFDLIFAGGGDDIVRGNAGADAIFGRAGDDT 595
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
G D G +G D + + I + DF ++++ D
Sbjct: 596 LLGGQGADTLLGGAGADVLDGGLGQDMLVGGAGADTFIFNSGTDEIVDFEQGLDQIIL-D 654
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + +L D I + + +
Sbjct: 655 PSLWTGLTSAADLLFLYGDISDGRATIDFENGDVL 689
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 7/117 (5%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------GYEKNMTIAQHTVIESVVGSSG 276
D G D + ID+ S S G +T+ + + G++G
Sbjct: 306 DDFGLDNISALAAAKRGAGIDIFAASSSETGVTQLRLDTGVAGVTLTAVVDGDDLTGTNG 365
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
D++ G++ ++ ++G+D+ G D A + ++ + + D
Sbjct: 366 GDILQGHNGDDTLNGAAGDDILRDGLGRDNMTGGAGADVFILSADGAEDTITDFTAG 422
>gi|119485489|ref|ZP_01619817.1| hypothetical protein L8106_10116 [Lyngbya sp. PCC 8106]
gi|119457245|gb|EAW38371.1| hypothetical protein L8106_10116 [Lyngbya sp. PCC 8106]
Length = 248
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 14/122 (11%)
Query: 222 IYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ GDD+++ T+ G + N I I N I + + + +G
Sbjct: 78 VFAGKGDDIIEGRFGADTIFGDIGNDI---------INANAGNDLIFGNNDQDQINAGNG 128
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + G N+ GND+ G G D S + I ++ D
Sbjct: 129 DDTIFGGQGNDDIDAGIGNDLIFGDIGNDRLRGGGGSDQFVIGSGFGTDVISDYGNGTDR 188
Query: 337 FL 338
L
Sbjct: 189 IL 190
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 68/181 (37%), Gaps = 15/181 (8%)
Query: 220 QTIYDSGGDDLLDLT------LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+I+ G D L + LIGG+ N + + + + + I +++ G
Sbjct: 39 DSIFGLDGGDTLQGSQEGGDTLIGGLGNDFLFVNGNNNWVFAGKGDDIIEGRFGADTIFG 98
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND++ N+ N++ F ++ D + +G DT F + + I +
Sbjct: 99 DIGNDIINANAGNDLIFGNNDQDQINAGNGDDTIFGGQGNDDIDAGIGNDLI----FGDI 154
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D L +DQ + I +Y + + ++ + E+ F E + E
Sbjct: 155 GNDRLRGG---GGSDQFVIGSGFGTDVISDYGNGTDRI--LLQGGITEADLDFVEADIVE 209
Query: 394 G 394
G
Sbjct: 210 G 210
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 9/128 (7%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESS-GNDVFDGSSGLDTF-------FYYAPS 313
I +S+VG+S D + G + S G D G G D + +A
Sbjct: 23 IFGTEGADSLVGTSEPDSIFGLDGGDTLQGSQEGGDTLIGGLGNDFLFVNGNNNWVFAGK 82
Query: 314 YLYKI-YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I RF I D + + + + + + +D+
Sbjct: 83 GDDIIEGRFGADTIFGDIGNDIINANAGNDLIFGNNDQDQINAGNGDDTIFGGQGNDDID 142
Query: 373 QVIGQDVF 380
IG D+
Sbjct: 143 AGIGNDLI 150
>gi|307306987|ref|ZP_07586727.1| type 1 secretion target domain protein [Shewanella baltica BA175]
gi|306910565|gb|EFN40995.1| type 1 secretion target domain protein [Shewanella baltica BA175]
Length = 1617
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 12/161 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G GND++ G N+ + +GND+ G +G DT + V+
Sbjct: 1435 DVLIGGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKLT-GGTGADTFVW 1493
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE------YTASYEDLIQVIGQDVFES 382
A E D ++D D + + + L+ +S +I +
Sbjct: 1494 QAGESGTDHITDFNIHEDKLDLRDLLQGENTNTLDSYLNFSLNSSGSTVIDIDANQDGVF 1553
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+H G++ FD Y + + GS+
Sbjct: 1554 EQHIILDGVN-----LFDEYGSTNDAGIINGLLGSNNDGPL 1589
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 7/141 (4%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N + + + G +GND++ G + N+ GND G +G DTF + A
Sbjct: 1439 GGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKLTGGTGADTFVWQAGES 1498
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N +++ +D L E D ++ S + + +D V
Sbjct: 1499 GTDHITDFN---IHEDKLDLRDLLQG-ENTNTLDSYLNFSLNSSGSTVIDIDANQD--GV 1552
Query: 375 IGQDVF-ESMKHFYEFGLSEG 394
Q + + + F E+G +
Sbjct: 1553 FEQHIILDGVNLFDEYGSTND 1573
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 80/247 (32%), Gaps = 37/247 (14%)
Query: 197 APKGSLGNNIYKIEV----QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + G + + +TI ++ G D L GG + + N
Sbjct: 771 SNFKTSGITTEQFRTGDFTTAPFNTGTRTIDNTSGQDQL--LGTGGNDHLVSANGGGD-L 827
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + ++ D + G + N+V GND G +G D
Sbjct: 828 LYGMDGDDILVGSDAVQ-------GDSLYGGTGNDVLVAGLGNDGLYGDAGTDIAVLLGN 880
Query: 313 SYLYKIYRFENAII--------VYDANEHKQDFLSDVERLRFAD------QCIDSVNVKQ 358
Y I + V + L DVE ++F D Q + ++Q
Sbjct: 881 RADYIIEKGTGYSSNDRWFNFFVTENGIGVTKALHDVEYVQFKDGIYAINQITGELTLEQ 940
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ ++Y + + +D ES+ GL EG + LY S L +D
Sbjct: 941 PTAVDYPIEIN--VSLADRDGSESIDSIQLSGLPEG------TLLY-SSNGTLMGTADAD 991
Query: 419 RGAAARH 425
H
Sbjct: 992 GNILLNH 998
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D G L + I G N + + + G +GND +IG N+
Sbjct: 1424 DFDQSGASDKADVLIGGQGNDILYGQGGNDQLYGGNGNDLIFGGAGNDTIIGGLGNDKLT 1483
Query: 291 ESSGNDVF---DGSSGLDTF 307
+G D F G SG D
Sbjct: 1484 GGTGADTFVWQAGESGTDHI 1503
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 10/110 (9%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+V GND+ G G D + + L F A D L+
Sbjct: 1434 ADVLIGGQGNDILYGQGGNDQLYGGNGNDL----IFGGAGNDTIIGGLGNDKLTGG---T 1486
Query: 346 FADQCIDSVNVKQRSILEYTASYE---DLIQVIGQDVFESMKHFYEFGLS 392
AD + + +E DL ++ + ++ + F L+
Sbjct: 1487 GADTFVWQAGESGTDHITDFNIHEDKLDLRDLLQGENTNTLDSYLNFSLN 1536
>gi|125654687|ref|YP_001033881.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77386347|gb|ABA81776.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 313
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 56/182 (30%), Gaps = 22/182 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG---------VKNYIDLNTESW 250
G GN+ ++I +Y G D LDL+ D E +
Sbjct: 82 GQAGNDTFRIRGVDLADD----VYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPF 137
Query: 251 SSIGGYEKNMTI--AQHTVI------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ I A+ V+ E++ G GND + G +V G D G +
Sbjct: 138 GPYVVKSIEIVIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGT 197
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D A + ++E ++V A +R FA +
Sbjct: 198 GNDLLLGGAGNDRLD-GQWERDVLVGGAGNDILIGGGGADRFVFAGNFGRDRIRDFSPDM 256
Query: 363 EY 364
E
Sbjct: 257 EG 258
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + T + ++G +GND + G +V +GND+ G G D F +
Sbjct: 184 LRGMEGADALFGGTGNDLLLGGAGNDRLDGQWERDVLVGGAGNDILIGGGGADRFVFAGN 243
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+I F + + ++
Sbjct: 244 FGRDRIRDFSPDMEGEWIDLRGVGAITGF 272
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 5/104 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+AQ + ++ G+ GND++ G + GND +G G+D + L +
Sbjct: 17 LAQSALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFY 76
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+A + D + + AD + YT
Sbjct: 77 HDACY----GQAGNDTFR-IRGVDLADDVYGGAGTDTLDLSGYT 115
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 51/176 (28%), Gaps = 40/176 (22%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF------------------FESSGND 296
G N + + +VG GND + G + + +GND
Sbjct: 28 GTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDACYGQAGND 87
Query: 297 VF-----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVER 343
F G +G DT + L +R + A YD + +E
Sbjct: 88 TFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEI 147
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + L + L G DV M EG D F
Sbjct: 148 VIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGM---------EGADALF 194
>gi|157830597|pdb|1CGE|A Chain A, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
Collagenase Complexed To Itself
Length = 168
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 58/194 (29%), Gaps = 49/194 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W +RY+ + T D+ A WS V LTF + S +DI
Sbjct: 7 RWEQTHLRYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTPLTFTKVSEGQADIM 59
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A HE
Sbjct: 60 ISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLHRVAAHE 118
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M +F D
Sbjct: 119 LGHSLGLSHSTDIGA-------------------LM--------YPSYTFSGDVQLAQDD 151
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG +
Sbjct: 152 IDGIQAIYGRSQNP 165
>gi|300868523|ref|ZP_07113142.1| hypothetical protein OSCI_3720049 [Oscillatoria sp. PCC 6506]
gi|300333512|emb|CBN58330.1| hypothetical protein OSCI_3720049 [Oscillatoria sp. PCC 6506]
Length = 1633
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 61/185 (32%), Gaps = 9/185 (4%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+N+Y + + + + +GG+ D L G N I L I G + + ++
Sbjct: 1388 DDNLYGGDSKDIFNGNQGNDFITGGNS--DDILYGDEDNDIILGELGNDLIFGGKGSDSL 1445
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G+ +D + G N+V + GND GS G D F S
Sbjct: 1446 NGREANDIIFGNKDDDFIDGGKENDVLYGGQGNDTILGSEGNDNLFGQLDSD----TICG 1501
Query: 323 NAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + D L E + + K IL + L G D+
Sbjct: 1502 GVGDDLISGNEQDDILGGCEGNDTIYGGEDNDTITGGKGNDILHGDLGNDSLTGGSGNDI 1561
Query: 380 FESMK 384
F
Sbjct: 1562 FALKA 1566
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 66/174 (37%), Gaps = 7/174 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
K + +Y G+D + L G + L++++ I G + I+ +
Sbjct: 1458 KDDDFIDGGKENDVLYGGQGNDTI-LGSEGNDNLFGQLDSDT---ICGGVGDDLISGNEQ 1513
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G GND + G N+ GND+ G G D+ + + ++ + +
Sbjct: 1514 DDILGGCEGNDTIYGGEDNDTITGGKGNDILHGDLGNDSLTGGSGNDIFALKAGHGFDTI 1573
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D QD + L F ++ + Q +I++ + E L +IG
Sbjct: 1574 SD-FTVGQDSIGLSGVLSF--GQLEMIQNTQGTIVKNLLTGEQLAVIIGVSKDA 1624
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 1/168 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D IG N L + S + + + + G+ GND + G +++++ +
Sbjct: 1361 DEIQIGTPSNDKFLGSNSGNIFDAKSGDDNLYGGDSKDIFNGNQGNDFITGGNSDDILYG 1420
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
ND+ G G D F S R N II + ++ D + + L
Sbjct: 1421 DEDNDIILGELGNDLIFGGKGSDSLN-GREANDIIFGNKDDDFIDGGKENDVLYGGQGND 1479
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + L + + +G D+ + G EG D +
Sbjct: 1480 TILGSEGNDNLFGQLDSDTICGGVGDDLISGNEQDDILGGCEGNDTIY 1527
>gi|291520117|emb|CBK75338.1| hypothetical protein CIY_27760 [Butyrivibrio fibrisolvens 16/4]
Length = 178
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
F++ Y Y D+ G+D H++ G+ E R P +F Y + + DL +
Sbjct: 52 FNAKEYAAYYPDVEQALGTDEKILFSHFVNFGIWEQRQPSVSFNVDVYASRNADLQKLYG 111
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
D + H++N E L + +V+ +G A
Sbjct: 112 DD---IVAYYVHYANNKKTEAWRPLPVPTDALWHNCIVYSVYDFVKGQA 157
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFG 416
+ EY A Y D+ Q +G D HF FG+ E R +F+ +Y DL+ ++G
Sbjct: 52 FNAKEYAAYYPDVEQALGTDEKILFSHFVNFGIWEQRQPSVSFNVDVYASRNADLQKLYG 111
Query: 417 SDRGAAARHYITHGVKE 433
D A HY + E
Sbjct: 112 DDIVAYYVHYANNKKTE 128
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRN 497
F A EY A + D+ A ++ HF NFG E R V+F+ +Y DL+
Sbjct: 52 FNAKEYAAYYPDVEQALGTDEKIL---FSHFVNFGIWEQRQPSVSFNVDVYASRNADLQK 108
Query: 498 VFGSDRGAAARHYITHGVKEGRNP 521
++G D A HY + E P
Sbjct: 109 LYGDDIVAYYVHYANNKKTEAWRP 132
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 7/123 (5%)
Query: 453 INAFADAPDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ AF + H EE F++ Y Y D+ G+D H+
Sbjct: 20 VTAFTIDSSAASAVETHKRTLTVEELTALSTIFNAKEYAAYYPDVEQALGTDEKILFSHF 79
Query: 511 ITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG-RSITFN 568
+ G+ E R P +F Y + + DL + D + A H++N E R +
Sbjct: 80 VNFGIWEQRQPSVSFNVDVYASRNADLQKLYGDD---IVAYYVHYANNKKTEAWRPLPVP 136
Query: 569 PDL 571
D
Sbjct: 137 TDA 139
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDD 578
F A EY A + D+ A ++ + HF NFG E R S++FN D+Y + D
Sbjct: 49 STIFNAKEYAAYYPDVEQALGTDEKILFS---HFVNFGIWEQRQPSVSFNVDVYASRNAD 105
Query: 579 LWNVFGSDRSAAAQHY 594
L ++G D A HY
Sbjct: 106 LQKLYGDDIVAYYVHY 121
Score = 44.3 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
+ AF A + H EE +++ FN Y Y D+ G+D H+
Sbjct: 20 VTAFTIDSSAASAVETHKRTLTVEELTALSTIFNAKEYAAYYPDVEQALGTDEKILFSHF 79
Query: 595 ITHGMKEGR--ALGISGMQFKS 614
+ G+ E R ++ + + S
Sbjct: 80 VNFGIWEQRQPSVSFNVDVYAS 101
>gi|229529479|ref|ZP_04418869.1| RTX (Repeat in toxin) cytotoxin [Vibrio cholerae 12129(1)]
gi|229333253|gb|EEN98739.1| RTX (Repeat in toxin) cytotoxin [Vibrio cholerae 12129(1)]
Length = 2630
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 65/221 (29%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+++ +++ + GG K++ + G G+DV +N
Sbjct: 2253 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGTSN 2311
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 2312 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 2370
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ G D+
Sbjct: 2371 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVV 2430
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N D AA + EGR+
Sbjct: 2431 -----KLMGYHAVLNGGDGDDHLIAAAISKFSQFNGGEGRD 2466
Score = 44.7 bits (104), Expect = 0.055, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 55/205 (26%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQ------------TIYDSGGDDLL---------------D 232
G G++++ + ++ G+D D
Sbjct: 2297 GGRGDDVFYATGTSNIFTGGEGNDMGVLMGRENMMFGGDGNDTAVVAGRINHVFLGAGDD 2356
Query: 233 LTLIGGVKNYID--------LNTESWSSIGGYEK---NMTIAQHTVIESVVGSSGNDV-- 279
+ + G ID + + +++ + + ++TI + +E +GND
Sbjct: 2357 QSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVEL---GAGNDFAN 2413
Query: 280 VIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVYD 329
+ GN N +GNDV +G G D A S + E ++V
Sbjct: 2414 IFGN--YNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIAAAISKFSQFNGGEGRDLMVLG 2471
Query: 330 ANEHKQDFLSDVERLRFADQCIDSV 354
++ +DV+ + ID++
Sbjct: 2472 GYQNTFKGGTDVDSFVVSGDVIDNL 2496
Score = 37.4 bits (85), Expect = 7.2, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTI-AQHTVIES------VVGS 274
D+G D D ++ G N ++L + +++I G + A + V++ + G
Sbjct: 2385 VDTG--DDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGG 2442
Query: 275 SGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D +I + + + F G D+ +TF + + +V D
Sbjct: 2443 DGDDHLIAAAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRS 2502
Query: 333 HKQDFLSDVE 342
+ ++
Sbjct: 2503 EDNIVFNGID 2512
>gi|149188797|ref|ZP_01867088.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
gi|148837458|gb|EDL54404.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
Length = 1480
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 62/188 (32%), Gaps = 13/188 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ G+D LD L GG + L ++ G N I
Sbjct: 911 NDTLSGGGGADVLSGDAGEDTLDGGDGNDELSGGEATDVLLGGAGNDTLSGDAGNDFIYA 970
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ ++++G G D + G S NN+ SG+D+ G +G DT K +
Sbjct: 971 GSGDDTLLGGDGTDQLFGESGNNLIDGGSGDDILMGGTGNDTILGGDGDDFIKTGAGNDT 1030
Query: 325 IIVYDANEH-----KQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ N++ + LS + + AD + L ++ + +G
Sbjct: 1031 VSGGVGNDNISAESGSNVLSGNAGDDTITSADGNDTLDGGEGNDALTSGGGHDTVRGGLG 1090
Query: 377 QDVFESMK 384
D +
Sbjct: 1091 NDTIVASA 1098
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 2/156 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D L GG + + + + +G + A T ++ G +G+D +IG+ A
Sbjct: 781 GGDGYDF-LAGGAGDDVMTDDGQDTLLGEAGNDTLTAAATGSHNIYGGTGDDTLIGSDAA 839
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ + + ND G G DT F + + + +A + D + L
Sbjct: 840 DTLYGGADNDTITGGGGNDTLFAGDGADTVTAGT-GDDTVYGEAGNNTVDLGEGNDTLFG 898
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+V L + L G+D +
Sbjct: 899 GSGSDHAVGGLGNDTLSGGGGADVLSGDAGEDTLDG 934
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 20/191 (10%)
Query: 203 GNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--------S 252
+ +Y +Y G+D L+ G + ++ N
Sbjct: 1118 DDTLYGGSDNDSLISGAGHDKLYGGDGNDTLN---AGSGHDVLEGNEGDDKLYGYGDNDQ 1174
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + ++G GND + G+S ++ + GND +G SG DT F
Sbjct: 1175 LDGGSGNDQLFGGDGDDQLIGGIGNDKLKGDSGVDLLYGGEGNDRLEGGSGNDTLFGQDG 1234
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + E D L S + L + ++ +
Sbjct: 1235 NDTL----YGQSGDDQMFGELGDDKLFGGSGNDNLSGKEGNDTLDGGGGSDYVDGGVGND 1290
Query: 370 DLIQVIGQDVF 380
L G D+
Sbjct: 1291 TLRGGSGDDLV 1301
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 17/186 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
IY GDD L D T ++ +L + G N TI
Sbjct: 956 NDTLSGDAGNDFIYAGSGDDTLLGGDGTDQLFGESGNNLIDGGSGDDILMGGTGNDTILG 1015
Query: 265 HTVIESVVGSSGNDVVIGNSAN---------NVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + +GND V G N NV ++G+D + G DT +
Sbjct: 1016 GDGDDFIKTGAGNDTVSGGVGNDNISAESGSNVLSGNAGDDTITSADGNDTLDGGEGND- 1074
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-TASYEDLIQV 374
+ V + S + D+ D+++ Y + + LI
Sbjct: 1075 -ALTSGGGHDTVRGGLGNDTIVASAGNNTLYGDEGNDTISSGAGDDTLYGGSDNDSLISG 1133
Query: 375 IGQDVF 380
G D
Sbjct: 1134 AGHDKL 1139
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 18/201 (8%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDL----TLIGGVKNYIDLNTESWS 251
G GN+ + K T+ G+D + ++ G + + +
Sbjct: 1005 MGGTGNDTILGGDGDDFIKTGAGNDTVSGGVGNDNISAESGSNVLSGNAGDDTITSADGN 1064
Query: 252 S-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G E N + ++V G GND ++ ++ NN + GND +G DT +
Sbjct: 1065 DTLDGGEGNDALTSGGGHDTVRGGLGNDTIVASAGNNTLYGDEGNDTISSGAGDDTLYGG 1124
Query: 311 APSYLYKIYRFENAIIVYDANE-----HKQDFLSDVE----RLRFADQCIDSVNVKQRSI 361
+ + + + D N+ D L E + D +
Sbjct: 1125 SDNDSLISGAGHDKLYGGDGNDTLNAGSGHDVLEGNEGDDKLYGYGDNDQLDGGSGNDQL 1184
Query: 362 LEYTASYEDLIQVIGQDVFES 382
+ LI IG D +
Sbjct: 1185 FGGDGD-DQLIGGIGNDKLKG 1204
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 11/146 (7%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGY 256
+ IY K TIY GDD LD L G N + + + G
Sbjct: 201 DQIYGGAGDDILKGQQGNDTIYGGTGDDFLDGDINDDRLFGEEGNDVLVGGNGDDYLSGG 260
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N T+ +++ G G+D ++G ++ G D+ G G DT + A
Sbjct: 261 TGNDTLLGSDGNDTLHGDEGDDTLLGELGDDTIHGGDGADIIIGDDGTDTLYGDAGDDK- 319
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVE 342
F D L E
Sbjct: 320 ---IFGGKGDDLLEGGEGADELQGEE 342
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 58/186 (31%), Gaps = 25/186 (13%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ I G D L D + GG + + E + G E N I
Sbjct: 290 DDTIHGGDGADIIIGDDGTDTLYGDAGDDKIFGGKGDDLLEGGEGADELQGEEGNDNILG 349
Query: 265 HTVIESVVGSSGNDVVI------------------GNSANNVFFESSGNDVFDGSSGLDT 306
+ + V+G +GND + G++ N+V GND G G D
Sbjct: 350 GSGADFVIGGAGNDTISGGDDNDLLLGGDGDDVMQGDAGNDVLVGEFGNDTLSGGDGNDV 409
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + +Y D + + +++ D + + Y
Sbjct: 410 LIGDSGNDV--LVGGLGNDELYGGEGSDTIDAGDGDDIVHSNEGADVIATGAGNDQVYAG 467
Query: 367 SYEDLI 372
D+I
Sbjct: 468 EGNDVI 473
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 9/174 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTV 267
++ G+D+L + DL + + + TI +
Sbjct: 632 NDTLTAGNNASELFGGSGNDVLTGSDEN------DLLAGGSDDDQLFSGKGDDTIFAGSG 685
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++VV GND V G + +N +G+D G +G DT + R N ++
Sbjct: 686 ADNVVTGEGNDTVFGEAGSNTISTGTGDDAVYGGTGADTVDAGEGNDAIYADR-GNDVVH 744
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D ++L D L Y+ L G DV
Sbjct: 745 AGLGDDHIDGGDGDDKLYGQDGNDAIFGGDGNDELVGGDGYDFLAGGAGDDVMT 798
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + T++ G+D L D + G + + ++ G E N T+
Sbjct: 1217 NDRLEGGSGNDTLFGQDGNDTLYGQSGDDQMFGELGDDKLFGGSGNDNLSGKEGNDTLDG 1276
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ V G GND + G S +++ F GND DG SGLD F + E
Sbjct: 1277 GGGSDYVDGGVGNDTLRGGSGDDLVFGQEGNDSLDGGSGLDQLFAGSGDDTLTFDSEE 1334
Score = 44.7 bits (104), Expect = 0.056, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 82/273 (30%), Gaps = 40/273 (14%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVM-----------------------SYFMPQDSMMDA 175
Y+ D+ +DS+ T+ +Y + Q + A
Sbjct: 60 EYDSSSNSETSDSSSGDDSWGTTTTVYSYSGSESNSSEETIVHGVRLGNYIIEQTGNLTA 119
Query: 176 SFGYCATP------MVSDIVAVQKIYGAPKGSLGNNIYKIEVQ----QKDSPFIQTIYDS 225
+F T + D V A G+ + E D+P ++
Sbjct: 120 NFNVSGTYETVIVTIKDDQGVVIHSQEAIVDENGDVVIDFEFTESQVSADTPVFFSLESV 179
Query: 226 GGD---DLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G D L+ I + D + G + N TI T + + G +D +
Sbjct: 180 DGTPIDDDLESVNIAVHNIFNDQIYGGAGDDILKGQQGNDTIYGGTGDDFLDGDINDDRL 239
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G N+V +G+D G +G DT + ++ E + D
Sbjct: 240 FGEEGNDVLVGGNGDDYLSGGTGNDTLLGSDGND--TLHGDEGDDTLLGELGDDTIHGGD 297
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ D D++ + +DL++
Sbjct: 298 GADIIIGDDGTDTLYGDAGDDKIFGGKGDDLLE 330
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 8/189 (4%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++YG + ++ + I G+D + G N + +NT S
Sbjct: 427 ELYGGEGSDTIDAGDGDDIV-HSNEGADVIATGAGNDQV----YAGEGNDV-INTGSGDD 480
Query: 253 I-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + I T +++ SG+DV+ + N+ F SG + D +G DT +
Sbjct: 481 IVFGQSGSNVIDTGTGADTIYTESGDDVISSGADNDTIFAGSGLNQIDSGNGDDTIYADD 540
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ I D N + + D +++ D + + +
Sbjct: 541 GADNVISGLGDDVIYAGDGNNTVKAGIGD-DKVYAGSGDDDIDAGDGHDEVFAGGGNDTI 599
Query: 372 IQVIGQDVF 380
+G D
Sbjct: 600 NAGLGNDSI 608
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 53/173 (30%), Gaps = 28/173 (16%)
Query: 204 NNIYKIEVQQKDSP--FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNM 260
+ +Y + ++ G+D L G + L+ S + G N
Sbjct: 1236 DTLYGQSGDDQMFGELGDDKLFGGSGNDNL-----SGKEGNDTLDGGGGSDYVDGGVGND 1290
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-----------------DGSSG 303
T+ + + V G GND + G S + F SG+D G G
Sbjct: 1291 TLRGGSGDDLVFGQEGNDSLDGGSGLDQLFAGSGDDTLTFDSEEMTSGDANTVYFSGGEG 1350
Query: 304 LDTFFYYAPSYLYKIYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDS 353
D + I + A I N D ++++ D ++
Sbjct: 1351 FDVLVVGSDGDNQTIDMSKTAFQEIEGVRVNSSDTDISIALDKIVVNDTAGEA 1403
Score = 41.6 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 57/205 (27%), Gaps = 6/205 (2%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYIDL 245
I A + G+ + IY + + IY G++ + IG K Y
Sbjct: 518 IFAGSGLNQIDSGNGDDTIYADDGADNVISGLGDDVIYAGDGNNTVK-AGIGDDKVY--- 573
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I + + + +++ GND + ++V G + G +G D
Sbjct: 574 AGSGDDDIDAGDGHDEVFAGGGNDTINAGLGNDSIFAGGGDDVVLGQQGANKLFGEAGND 633
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + + + D N+ D + +++
Sbjct: 634 TLTAGNNASELFGGSGNDVLTGSDENDLLAGGSDDDQLFSGKGDDTIFAGSGADNVVTGE 693
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFG 390
+ + + +G
Sbjct: 694 GNDTVFGEAGSNTISTGTGDDAVYG 718
>gi|56681790|gb|AAW21431.1| leukotoxin A [Pasteurellaceae bacterium I6]
Length = 391
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 232 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 291
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 292 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 328
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ N+ F G D DG+ G D F I N
Sbjct: 220 VEEIIGTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 276
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 277 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 321
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 9/170 (5%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ I + +D+ + N D +I G + N + + + G +G
Sbjct: 218 KAVEEIIGTSHNDIFKGSKFNDAFNGGD----GVDTIDGNDGNDRLFGGKGDDIIDGGNG 273
Query: 277 NDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
+D + G N++ G+D+F G D+ + + N H
Sbjct: 274 DDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDLTFEKVNHH 333
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E++ Q ++I Y A+ +D I+ I E +
Sbjct: 334 LVITNTKQEKVTI--QHWFREAEFAKTIRNYVATRDDKIEEIIGQNGERI 381
>gi|254422945|ref|ZP_05036663.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196190434|gb|EDX85398.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 654
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S G + I + + G GND + G+ +++ + +G+D+ G G D +
Sbjct: 520 SVQNGATGDDIIYGGAGRDRIGGKGGNDKLYGDEDDDLIWGDNGDDLLWGGRGNDGLYGG 579
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ + E +YD QD + L F
Sbjct: 580 QGRDTFVLAPGEGTDSLYD-FTQGQDVFGLTQALSF 614
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 28/97 (28%), Gaps = 26/97 (26%)
Query: 271 VVGSSGNDVVIGN----------SANNVFFESSGNDVFDGSSGLDTFFYY---------- 310
+ G G+D++ G+ + +++ + +G D G G D +
Sbjct: 503 IFGEFGDDILRGDRNNRSVQNGATGDDIIYGGAGRDRIGGKGGNDKLYGDEDDDLIWGDN 562
Query: 311 ------APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+Y + A D L D
Sbjct: 563 GDDLLWGGRGNDGLYGGQGRDTFVLAPGEGTDSLYDF 599
>gi|153824830|ref|ZP_01977497.1| von Willebrand factor, type A [Vibrio cholerae MZO-2]
gi|149741548|gb|EDM55578.1| von Willebrand factor, type A [Vibrio cholerae MZO-2]
Length = 1979
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 57/177 (32%), Gaps = 24/177 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----DLNTESW 250
G P+ LG Y S +T+ + G D ++ D T +
Sbjct: 1145 GTPQHLLGGKNYFGWENIDSSYIKETL--TSGVDNPNVVHTKQSNAIRGMWGSDNITTHF 1202
Query: 251 SSIGG-YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S + I ++ + S ND + G S N++ G+D G G+DT Y
Sbjct: 1203 SQFDQILAGDDGILGNS--DGTNASQVNDTLTGGSGNDILIGEQGDDTLYGGDGVDTAVY 1260
Query: 310 YAPSYLYKIYRFENA--------------IIVYDANEHKQDFLSDVERLRFADQCID 352
Y I + + + D L +ERL+FAD
Sbjct: 1261 AKNFSDYTIGQVKFDGGNTPNFQVKDKLVTVTNPYAGEGTDQLYSIERLQFADGTYY 1317
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G +GND++ G N+ G D G SG DT + + I N I+
Sbjct: 1820 DTLIGGAGNDILFGQGGNDRLDGGVGKDTLYGGSGNDTLIGGNDNDIL-IGGLGNDILT- 1877
Query: 329 DANEHKQDFLSDVE 342
+D V+
Sbjct: 1878 --GGSGEDLFKWVD 1889
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TLIGG N I + G N + +++ G SGND +IG + N++
Sbjct: 1819 DDTLIGGAGNDI---------LFGQGGNDRLDGGVGKDTLYGGSGNDTLIGGNDNDILIG 1869
Query: 292 SSGNDVFDGSSGLDTF 307
GND+ G SG D F
Sbjct: 1870 GLGNDILTGGSGEDLF 1885
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 1/113 (0%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D +IG + N++ F GND DG G DT + + + I +N I++
Sbjct: 1819 DDTLIGGAGNDILFGQGGNDRLDGGVGKDTLYGGSGNDTL-IGGNDNDILIGGLGNDILT 1877
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
S + ++ D +D + DL + + + +
Sbjct: 1878 GGSGEDLFKWVDGDLDGSTDRITDFHLSEKDKIDLSDLFDNPSEQEVTALLDS 1930
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
IGG ++ Q + + G G D + G S N+ + ND+ G G D +
Sbjct: 1823 IGGAGNDILFGQG-GNDRLDGGVGKDTLYGGSGNDTLIGGNDNDILIGGLGNDILTGGSG 1881
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFAD 348
L+K + + + + DF LS+ +++ +D
Sbjct: 1882 EDLFKWVDGD----LDGSTDRITDFHLSEKDKIDLSD 1914
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 1/102 (0%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
YI + + K+ T+ + + G GND + G + + SGND G
Sbjct: 1802 YISQHASEFDISTDIHKDDTLIGGAGNDILFGQGGNDRLDGGVGKDTLYGGSGNDTLIGG 1861
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVE 342
+ D + + E+ D + + D ++D
Sbjct: 1862 NDNDILIGGLGNDILTGGSGEDLFKWVDGDLDGSTDRITDFH 1903
>gi|307292909|ref|ZP_07572755.1| Cadherin [Sphingobium chlorophenolicum L-1]
gi|306880975|gb|EFN12191.1| Cadherin [Sphingobium chlorophenolicum L-1]
Length = 1431
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 88/266 (33%), Gaps = 34/266 (12%)
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y+ + +V P + + M ++ AV K+ A +LG + +
Sbjct: 1137 YDEQAIAVTVTILNAPPIIISNGGGASATIRMSENVAAVTKV-TATDVNLGQTV-TYSLG 1194
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN--------------TESWSSIGGYEK 258
+ I G +L+ + + ++
Sbjct: 1195 SAVDGALFAIDAQTGVLTFKAAPDFETPTDSNLDNRYQVQVLATDSLGAQDFQNLTIVVN 1254
Query: 259 NM------------TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
N+ T+ +++ G+ GNDV+IGN ++ + GND DG +G D
Sbjct: 1255 NVKGVSLTAASGGSTLTGGMEEDTLKGAGGNDVLIGNGGADILTGNGGNDSIDGGAGADR 1314
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
A + + + + +Y A + + D + F D +D +++ L +
Sbjct: 1315 ITGGAGADMLT-GGADADLFIYAATGNSTPLVMD-RIMDFQD-GLDRIDLSAIDALPALS 1371
Query: 367 SYEDLIQVIGQDVFESMK--HFYEFG 390
+ IG F HF+ G
Sbjct: 1372 GNQAFS-FIGNAAFSGAGQLHFFTNG 1396
>gi|291302473|ref|YP_003513751.1| RTX toxins and related Ca2+-binding protein-like protein
[Stackebrandtia nassauensis DSM 44728]
gi|290571693|gb|ADD44658.1| RTX toxins and related Ca2+-binding protein- like protein
[Stackebrandtia nassauensis DSM 44728]
Length = 717
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 23/190 (12%)
Query: 203 GNNIYKIEVQQK--DSPFIQTIYDSGGDDLLD-------------LTLIGGVKNYIDLNT 247
+ I Q+ +Y + G+D LD L + G+ L+
Sbjct: 386 DDTIVGGSQTQEIYAGDGNDVVYGAAGNDYLDGQKGDDKLYGGQGLDVAYGLDGADLLHG 445
Query: 248 ESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S + G + N + +++ G G+D + G+ ++VF+ G+DV G G +T
Sbjct: 446 GSEKDFLEGGQGNDMATGGSGNDAISGGGGDDRMAGDDGDDVFYGGKGHDVVAGGEGANT 505
Query: 307 FFYYAPSYLYK-------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
A + I +A + +++ K +D++ + + ++ +
Sbjct: 506 AHVQAEDAVVDARFNRVEISDNNDAFDIKGSDDFKDRVQADLDMMAASPTGQQMLDDMSK 565
Query: 360 SILEYTASYE 369
Y+
Sbjct: 566 HDNPEIRDYD 575
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 1/132 (0%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E W + + + TI + + + GNDVV G + N+ G+D G GLD
Sbjct: 374 NEHWDEVHAGKGDDTIVGGSQTQEIYAGDGNDVVYGAAGNDYLDGQKGDDKLYGGQGLDV 433
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + L ++ + N+ S + + +
Sbjct: 434 AYGLDGADLLHGGSEKDFLEGGQGNDMATGG-SGNDAISGGGGDDRMAGDDGDDVFYGGK 492
Query: 367 SYEDLIQVIGQD 378
++ + G +
Sbjct: 493 GHDVVAGGEGAN 504
>gi|254430604|ref|ZP_05044307.1| von Willebrand factor, type A [Cyanobium sp. PCC 7001]
gi|197625057|gb|EDY37616.1| von Willebrand factor, type A [Cyanobium sp. PCC 7001]
Length = 651
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + + G G+D++IG N+ + +GNDV G +G D +
Sbjct: 504 MTGSFGNDVLRGGRKKDRLFGGDGDDLLIGKKGNDRLYGGNGNDVLRGGAGPDWLRGGSG 563
Query: 313 SYLYKIYRFENAIIVY----DANEHKQDFLSDVER 343
+ ++ ++ + D + D+E
Sbjct: 564 RDVLIGGSGKDTFVLELDPVSGAQPGGDLIRDLEI 598
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++ G + G+ N+V D G G D + ++Y ++
Sbjct: 494 TIIKKKGRYFMTGSFGNDVLRGGRKKDRLFGGDGDDLLIGKKGND--RLYGGNGNDVLRG 551
Query: 330 ANEHKQDFLSD 340
D+L
Sbjct: 552 GA--GPDWLRG 560
>gi|126724570|ref|ZP_01740413.1| Hemolysin-type calcium-binding protein [Rhodobacterales bacterium
HTCC2150]
gi|126705734|gb|EBA04824.1| Hemolysin-type calcium-binding protein [Rhodobacterales bacterium
HTCC2150]
Length = 843
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 76/403 (18%), Positives = 132/403 (32%), Gaps = 20/403 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ D TL GG + L I G I + + G GND++ +++
Sbjct: 92 NSYDDTLYGGDGKDVLLGNGGHDEIYGGTGKDLINAGSGNDDAYGGDGNDILNLEDGDDL 151
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+GND+ + G D Y + + +++ DVE +
Sbjct: 152 GVGGAGNDIINAGDGED-LVYGDGQGDNLLNTNTDGTNPTSFDQYAASGGWDVETIE--G 208
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
Q S NV+ YT + DL + + G G IT +S +Y
Sbjct: 209 QTSMSQNVETEEGGTYTIQF-DLAANLAGGLTSGTVEVMWNGEVVG-TITAESGVYETHS 266
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D+ G G E + S+E + + D+
Sbjct: 267 IDV---VGDGNEGVLTFNTVSGQDESGVVINMDGPIF--SYEKTMEIYGQEIDVAAFAPG 321
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG---SDRGAAARHYITHGVKEGRNPDAFK 525
+ +G+ FD +Y+D G + G + +G+ D F
Sbjct: 322 QVKLYQVIDGQLKVFDPET--KNYEDAGEPTGIKINAIGFNVEDDMIYGIA---KKDGFD 376
Query: 526 ALEYIASHEDLI--NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF 583
L S +DL+ +A +A + + G + EG TF+ L S D+ N+
Sbjct: 377 HLGNPVSKQDLVMMDAEGNAYCIGKTGHGDYVGDFDSEGNLWTFDSSLNRVSAIDVDNLD 436
Query: 584 GSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
G +Y+ + EGRA I+ ++ E +
Sbjct: 437 GDGNPLVTDYYLPKDLFEGRAYDIAYNTEENAFYAVEAPSENG 479
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 39/121 (32%), Gaps = 4/121 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
N + IY GDD + IGG N E I G + I
Sbjct: 611 NTEGGNDVLRGGEGDDEIYGGAGDDKV----IGGADNDELYGDEGSDQIRGGSGSDEIYG 666
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + ++G SG D G N+ GND G SG D + ++
Sbjct: 667 GSGDDKILGGSGGDTASGGEDNDYINGGGGNDSISGGSGNDKLVGGKGADTISGGEGDDH 726
Query: 325 I 325
+
Sbjct: 727 M 727
>gi|73995001|ref|XP_852332.1| PREDICTED: similar to matrix metalloproteinase 17 preproprotein
[Canis familiaris]
Length = 661
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 24/133 (18%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIHS-DI 79
W + ++ + L P+ + + +AL WS + L F E + + DI
Sbjct: 193 TWHKRSLSWRVRTFPRD------SPLGPDTVRALMHYALKVWSDITPLNFHEVAGSAADI 246
Query: 80 KFISSNNGYVCTPRYDSRYF--------------MEINFDKADVW--RYGIGKGTILSHN 123
+ S + +D + +FD + W R L
Sbjct: 247 QIDFSKADHNDAYPFDGPGGTVAHAFFPGDHHTAGDAHFDDDESWAFRSSDAHDMDLFAV 306
Query: 124 ALHEIGHALGLMH 136
A+HE GHA+GL H
Sbjct: 307 AVHEFGHAIGLSH 319
>gi|329848648|ref|ZP_08263676.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843711|gb|EGF93280.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1081
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 73/221 (33%), Gaps = 21/221 (9%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYID-------LNTESWSSIG 254
+ IY + + T GG +D + G V + +T ++S G
Sbjct: 574 DAIYGGNGNDTLNGGLGTDTLVGGLDNDTYSVDNTGDVVTEANGQGTDTIFSTVTYSLSG 633
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-SGLDTFFYYAPS 313
Y + +T+ I + G+S + GN+ NN GND DG G DT A
Sbjct: 634 RYIEFLTLTGAANI-NATGNSLAQTLTGNTGNNTLTGLGGNDRLDGGAGGADTLIGGAGD 692
Query: 314 YLYKIYRFENAIIVYDANEH-------KQDFLSDVERLRFAD-QCIDSVNVKQRSILEYT 365
Y I + + S+VERL I+ ++L
Sbjct: 693 DTYVISTTGDTVTETIGEGWDLVESAITYTLGSEVERLTLTGSANINGTGNGLNNVLTGN 752
Query: 366 ASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
A L +G D ++ + G D F + Y
Sbjct: 753 AGNNTLAGGLGDDTYYVQNAADHVSESSNSGTDSVFSTVTY 793
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 64/199 (32%), Gaps = 24/199 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIA 263
T+ GG+D L + +++GG N I +T+ ++ G + + I
Sbjct: 482 NDTLHGGAGQDTLSGGGGNDELFGDSGNSSILGGSGNDTIHASTDWFNISFGQDGDDLIY 541
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-------Y 316
+ I+ + G +GND + G + GND G +G DT +
Sbjct: 542 GNFQIDQLDGGAGNDTMYGYDGGDSINGIDGNDAIYGGNGNDTLNGGLGTDTLVGGLDND 601
Query: 317 KIYRFENAIIVYDANEHKQDFLSD----------VERLRFAD-QCIDSVNVKQRSILEYT 365
+V +AN D + +E L I++ L
Sbjct: 602 TYSVDNTGDVVTEANGQGTDTIFSTVTYSLSGRYIEFLTLTGAANINATGNSLAQTLTGN 661
Query: 366 ASYEDLIQVIGQDVFESMK 384
L + G D +
Sbjct: 662 TGNNTLTGLGGNDRLDGGA 680
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 54/186 (29%), Gaps = 14/186 (7%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG G GN+ ++ +T+ G DLLD T + I+L T
Sbjct: 387 YGTFLGGDGNDT-----VLANNGANETLDGGAGTDLLDTTSWDDGYS-INLATG------ 434
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + E+ + GND V G S N +G D G G DT A
Sbjct: 435 --VTNYSPESFINFENAIMGDGNDTVTGTSGANDIDGGAGEDTLLGEDGNDTLHGGAGQD 492
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + N + D S ++ + L
Sbjct: 493 TLSGGGGNDELFGDSGNSSILGGSGNDTIHASTDWFNISFGQDGDDLIYGNFQIDQLDGG 552
Query: 375 IGQDVF 380
G D
Sbjct: 553 AGNDTM 558
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 14/137 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ + G D + L+ K I+L +++ G E ++I
Sbjct: 140 GDDYITYNNLTHNGSTFD---GGDGVDTFNAYLLVSTK-TINLADGTYADDYGTETLISI 195
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
E+V+G+ DV+ G+ A N+ G D G G DT + +
Sbjct: 196 ------ENVIGAPQTDVITGSDAANMLNGLGGEDSLYGGGGNDTIYGGDNYD----VIYG 245
Query: 323 NAIIVYDANEHKQDFLS 339
+ E D++
Sbjct: 246 GDGVNELYGEGGDDYIQ 262
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 5/147 (3%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLT-LIGGVKNYIDLNTESWS 251
IYG + + Q + F + YD G G D+LD + + G IDL +++
Sbjct: 243 IYGGDGVNELYGEGGDDYIQTQTSFYGSTYDGGDGSDMLDYSWIFGDYGIVIDLTVGTYT 302
Query: 252 SIGGYEKNMT---IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G E + + E+++G++G + + GN+ N+ G D +G G DT
Sbjct: 303 DGFGSETLLNFERVLGTQGSETLIGTTGANQIYGNAGNDSIVGFGGADTLNGGEGNDTVT 362
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQ 335
V ++ +
Sbjct: 363 ALTDFDGEDSVDGGEGDDVITSSGYGT 389
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 72/227 (31%), Gaps = 26/227 (11%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------DLTLIGGVKNYIDLNT 247
A GN + + T+ GDD + G + T
Sbjct: 736 ANINGTGN---GLNNVLTGNAGNNTLAGGLGDDTYYVQNAADHVSESSNSGTDSVFS--T 790
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++S G +N+T+ V G+ + ++GN+ N +G+D +GS+G DT
Sbjct: 791 VTYSLAGKQIENLTLTDAAV--DATGNGLANTLVGNANANTLDGGAGHDSLNGSAGADTM 848
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQ-------DFLSDVERLRFADQCIDSVNVKQR- 359
+ Y + + + ++ ++VE L +
Sbjct: 849 IGGTGNDSYAVDDVGDVVTEAASSGGDVVNASVTCTLSAEVESLVLTGTAAINGTGNAGN 908
Query: 360 SILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
+ L + L +G D ++ G D+ + + Y
Sbjct: 909 NTLTGNSGNNVLSGGLGNDTYYVQNTGDNVVEAGGAGTDLIYSTVTY 955
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 52/175 (29%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ GNN + D + G + + ++ G
Sbjct: 903 TGNAGNNTLTGNSGNNVLSGGLGNDTYYVQNTGDNVVEAGGAGTDLIYSTVTYTLAGRFA 962
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T + G+S ++ +IGN NN G D G G D F + A S I
Sbjct: 963 ETLTLTGTANINATGNSNSNTLIGNDGNNTLNGKGGPDKLTGGLGADIFLFEAGSAKDTI 1022
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
Y F A +++ + + +I AS D++
Sbjct: 1023 YDFSAAQNDTINVNAYTGGVANNSLVAQVGGNVVITFDASNTITVIGASQADVLA 1077
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 51/170 (30%), Gaps = 12/170 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G++ Y + + G D ++ N +L +I G
Sbjct: 30 MSGAGDDTYNVPGDVVVENPNE-----GTDLVISTITYTLGANVENLTLSGSGNIDGTGN 84
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ VI G+ G++ + GN N+ +GND G +G D+F
Sbjct: 85 EL----GNVI---TGNDGDNSLTGNDGNDTLAGGNGNDTLTGGAGDDSFDDIGGVNSISG 137
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
++ I + + F F + S + Y Y
Sbjct: 138 GDGDDYITYNNLTHNGSTFDGGDGVDTFNAYLLVSTKTINLADGTYADDY 187
>gi|119486636|ref|ZP_01620686.1| hypothetical protein L8106_12835 [Lyngbya sp. PCC 8106]
gi|119456253|gb|EAW37385.1| hypothetical protein L8106_12835 [Lyngbya sp. PCC 8106]
Length = 2074
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 82/247 (33%), Gaps = 40/247 (16%)
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA--PKGSLGNNIYK--IEVQQKDSPF 218
M Y QD D ++G MV + +YG +G+ + +E ++ S
Sbjct: 1798 MMYSGKQD---DFAYGGQNDDMVWGDLGSDTLYGDQGNDTMIGDTADENEVEAERGLSGM 1854
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
I ++ GDDL++ G N T++ ++V G +D
Sbjct: 1855 IDFMWGGAGDDLMN----------------------GGRSNDTLSGGVGNDTVRGGKEDD 1892
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+V G + +++ + GND+ G+ G DT + + I + + D L
Sbjct: 1893 LVYGEAGDDLMYGDLGNDLLCGNEGNDTIYGD-INDNETISTLPGRDTLCGGS--GNDIL 1949
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
E DQ + L S + L G D + G R
Sbjct: 1950 FGNE-----DQDR-LCGGEDSDTLYGGDSEDTLAGEQGDDWLFGDQGNDLISGGSGIDRF 2003
Query: 397 ITFDSYL 403
I F
Sbjct: 2004 ILFSGSG 2010
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 3/127 (2%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ SI G ++ TI+ + V G+D + + + F GND+ G G D+
Sbjct: 1693 AFGSIDGTPQSDTISGSLGSDMVFAFGGDDHIEASEGPDTVFGGDGNDLSFGEEGNDSLL 1752
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTA 366
S I + I A + DF+ L D + ++ Y
Sbjct: 1753 GDRGSDTL-IGSNGSQDIAATATIDENDFIYGHASNDLMQGGPGADMMYSGKQDDFAYGG 1811
Query: 367 SYEDLIQ 373
+D++
Sbjct: 1812 QNDDMVW 1818
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 24/181 (13%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDL-----LDLTLIG--GVKNYIDLN-TESWSSIGGYEK 258
+ + + S T++ G+DL + +L+G G I N ++ ++ ++
Sbjct: 1718 FGGDDHIEASEGPDTVFGGDGNDLSFGEEGNDSLLGDRGSDTLIGSNGSQDIAATATIDE 1777
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I H + + G G D++ ++ + +D+ G G DT + +
Sbjct: 1778 NDFIYGHASNDLMQGGPGADMMYSGKQDDFAYGGQNDDMVWGDLGSDTLYGDQGNDTMIG 1837
Query: 319 YRF-ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
EN + DF+ ++ S + L +G
Sbjct: 1838 DTADENEVEAERGLSGMIDFMWG---------------GAGDDLMNGGRSNDTLSGGVGN 1882
Query: 378 D 378
D
Sbjct: 1883 D 1883
>gi|149184366|ref|ZP_01862684.1| calcium-binding protein [Erythrobacter sp. SD-21]
gi|148831686|gb|EDL50119.1| calcium-binding protein [Erythrobacter sp. SD-21]
Length = 1015
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 69/198 (34%), Gaps = 19/198 (9%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
IYG L N +Y D ++ GG D + + TL ++ I +N
Sbjct: 211 HTIYGGGGDDLYNLVYGGWGFFPDVVELE----GGGYDTIRTSALNFTLPDNIERIIGMN 266
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
TE+ I G + I + G +G+D + G ++ SG+D G G DT
Sbjct: 267 TEA--RITGNSSDNVIFGG---RYMWGGAGDDEIYGRGGDDFMAGGSGDDFLHGGYGFDT 321
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y A + + + + +D L +ER+ +D A
Sbjct: 322 VDYSASTSAISLRWR-----IVYSESEGKDSLRSIERVIGSDFDDLMHGSGADDTFHGGA 376
Query: 367 SYEDLIQVIGQDVFESMK 384
++L G DV
Sbjct: 377 GSDELRGGKGSDVLFGEA 394
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 56/179 (31%), Gaps = 11/179 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D L + D+ S + + G + + + + G + +DVV G
Sbjct: 636 GKDTLRSIEQVIGSAFDDVLYGSVADNMLHGGGGSDELRGGEGSDLLFGEASDDVVYGGD 695
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-------DANEHKQDF 337
N+V GND+ +G G D + V D D
Sbjct: 696 GNDVLGGGYGNDLLEGGLGDDEINGGWGFDTVSYRDAGAGVQVKLWVLSSQDTLGAGFDL 755
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
LS +E + + V +IL + + L + G D E E GL
Sbjct: 756 LSSIENVTGSQFGDMLVGDSSSNILNGLSGDDVLKGLDGNDGLWGEDGNDLLEGGLGND 814
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 3/160 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G DLL + D+ SS + G + + + + G GND++ G
Sbjct: 750 GAGFDLLSSIENVTGSQFGDMLVGDSSSNILNGLSGDDVLKGLDGNDGLWGEDGNDLLEG 809
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+V G D G G DT F S K + + ++ + L D +
Sbjct: 810 GLGNDVLRGGEGADFLLGGQGKDTLFGGLGSDFLKGGNGNDQLYGDAGDDIIEGGLHD-D 868
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L D +L A + L G+D+
Sbjct: 869 VLYGLDGNDRLDGGGDNDLLFGGAGNDALTGSWGKDIMTG 908
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 51/159 (32%), Gaps = 3/159 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTE--SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G D L + D+ +++ I G + I + + G GND + G
Sbjct: 458 GAGFDTLSSIENISGSQFGDVLVGDFTFNIIEGLSGDDLIKGLDGNDVLWGGHGNDQLEG 517
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++V G D+ G G+D F S K + + ++ + L D +
Sbjct: 518 GGGSDVLRGGEGADLLLGGEGIDYLFGGTSSDFLKGGNGNDQLYGEAGDDIIEGGLHD-D 576
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
L D IL + L G D +
Sbjct: 577 VLYGLDGNDSLDGGGDNDILFGGTGDDLLDGGYGFDTVD 615
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 53/153 (34%), Gaps = 15/153 (9%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ G+DLL + L GG L + ++ G + + + + G +G
Sbjct: 798 LWGEDGNDLLEGGLGNDVLRGGEGADFLLGGQGKDTLFGGLGSDFLKGGNGNDQLYGDAG 857
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D++ G ++V + GND DG D F A + ++ +
Sbjct: 858 DDIIEGGLHDDVLYGLDGNDRLDGGGDNDLLFGGAGNDALTGSWGKDIMTGG-------- 909
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S +R F D S + + E
Sbjct: 910 --SGADRFLFGDTGHSSAFASLADTIMDFSRPE 940
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 17/146 (11%)
Query: 203 GNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTL------IGGVKNYIDLNTESWSSIG 254
+ +Y ++ ++ GDDLLD G + I L W +
Sbjct: 575 DDVLYGLDGNDSLDGGGDNDILFGGTGDDLLDGGYGFDTVDYSGASSAITLR---WRIVH 631
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + IE V+GS+ +DV+ G+ A+N+ G+D G G D F A
Sbjct: 632 SQSEGKDTLRS--IEQVIGSAFDDVLYGSVADNMLHGGGGSDELRGGEGSDLLFGEASDD 689
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD 340
+ + D L
Sbjct: 690 ----VVYGGDGNDVLGGGYGNDLLEG 711
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 17/149 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSG 303
+ G + T + + G G+DV+ G +++++ GNDV +G G
Sbjct: 363 MHGSGADDTFHGGAGSDELRGGKGSDVLFGEASDDIVCGGDGNDVLGGGYGDDFLEGGRG 422
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNV 356
D + V D D LS +E + + V
Sbjct: 423 DDEIRGGWGFDTASYTDAGAGVQVKLWVLSSQDTLGAGFDTLSSIENISGSQFGDVLVGD 482
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKH 385
+I+E + +DLI+ + + H
Sbjct: 483 FTFNIIEGLSG-DDLIKGLDGNDVLWGGH 510
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 17/151 (11%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTES 249
+ ++G G+ + IY + + GG D +D + I L
Sbjct: 284 RYMWG---GAGDDEIYGRGGDDFMAGGSGDDFLHGGYGFDTVDYSASTSA---ISLRWRI 337
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S + ++ IE V+GS +D++ G+ A++ F +G+D G G D F
Sbjct: 338 VYSESEGKDSLR-----SIERVIGSDFDDLMHGSGADDTFHGGAGSDELRGGKGSDVLFG 392
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
A + + + + DFL
Sbjct: 393 EASDDIVCGGDGNDVL----GGGYGDDFLEG 419
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 37/93 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + + G ND++ G + N+ S G D+ G SG D F +
Sbjct: 861 IEGGLHDDVLYGLDGNDRLDGGGDNDLLFGGAGNDALTGSWGKDIMTGGSGADRFLFGDT 920
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ + I+ + E + LS ++ +
Sbjct: 921 GHSSAFASLADTIMDFSRPEGDRIDLSQIDAIS 953
>gi|149201943|ref|ZP_01878917.1| hypothetical protein RTM1035_05365 [Roseovarius sp. TM1035]
gi|149144991|gb|EDM33020.1| hypothetical protein RTM1035_05365 [Roseovarius sp. TM1035]
Length = 598
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 33/91 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
IGG TI + V G G+D + G S N+ SG D +G G DT
Sbjct: 442 IGGGTGRDTIIGGAGDDQVGGGKGDDSIQGGSGNDDLSGGSGADTIEGGDGNDTVNGARG 501
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + A E + D + D E
Sbjct: 502 DDVLSGGAGADHFEFTVAKEGETDSVLDFED 532
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 1/130 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + +A ++++G GND + G + F SG+D +GS G DT
Sbjct: 253 LNGLAGDDRLAGDEGNDTLLGGDGNDRLFGQEGGDEIFGESGDDRLNGSLGHDTLNGGEG 312
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++++ N++ L + + + D ++ + L
Sbjct: 313 HDSLSAGLGDDSLTGDAGNDNIGGGLGN-DTIDAGDGDDTVGGGSGNDLITGGLGDDFLS 371
Query: 373 QVIGQDVFES 382
+D +
Sbjct: 372 GGWDRDTLDG 381
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 60/187 (32%), Gaps = 17/187 (9%)
Query: 203 GNNIYKIEVQQKDSP--FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
G+ I+ + + T+ G D L D +L G N +IGG
Sbjct: 286 GDEIFGESGDDRLNGSLGHDTLNGGEGHDSLSAGLGDDSLTGDAGND---------NIGG 336
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI ++V G SGND++ G ++ D DG G DT + +
Sbjct: 337 GLGNDTIDAGDGDDTVGGGSGNDLITGGLGDDFLSGGWDRDTLDGGDGHDTLTGASGADY 396
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ + N+ + +RL + + + +I
Sbjct: 397 LSGGAGDDIVAGASGNDRITGDAGN-DRLSGSAGDDRIDGGDGADQIGGGTGRDTIIGGA 455
Query: 376 GQDVFES 382
G D
Sbjct: 456 GDDQVGG 462
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 8/161 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G N L + + G E I + + + GS G+D + G ++
Sbjct: 259 DDRLAGDEGNDTLLGGDGNDRLFGQEGGDEIFGESGDDRLNGSLGHDTLNGGEGHDSLSA 318
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDV---ER 343
G+D G +G D + ++ + N+ DFLS +
Sbjct: 319 GLGDDSLTGDAGNDNIGGGLGNDTIDAGDGDDTVGGGSGNDLITGGLGDDFLSGGWDRDT 378
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L D L A + + G D
Sbjct: 379 LDGGDGHDTLTGASGADYLSGGAGDDIVAGASGNDRITGDA 419
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 10/115 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI----------GGYEKN 259
+ + ++ I D G + G Y + +S G N
Sbjct: 182 SDARASNKYVTYIPDESGTFYVSARYAVGYDRYANFFPIPYSVTWVDAILPLTEVGTLGN 241
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
T+ + + + G +G+D + G+ N+ GND G G D F +
Sbjct: 242 DTLLGNRDDDFLNGLAGDDRLAGDEGNDTLLGGDGNDRLFGQEGGDEIFGESGDD 296
>gi|149020725|gb|EDL78530.1| matrix metallopeptidase 8 [Rattus norvegicus]
Length = 466
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 64/214 (29%), Gaps = 51/214 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP D LL W++ + Y+ T ++ + A W
Sbjct: 89 KPRCGVPDSGDFLLTPGSPKWTHTNLTYRIINHTPQMSKAEV-------KTEIEKAFKIW 141
Query: 63 SKVVDLTFEETSIH-SDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKAD 108
S LTF ET +DI +N P + +FD +
Sbjct: 142 SVPSTLTFTETLEGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAHFDSEE 201
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W L A HE GH+LGL H YP Y Y S +Y +
Sbjct: 202 TWTQDSNNYN-LFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSL 250
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
PQD DI +Q IYG
Sbjct: 251 PQD----------------DINGIQTIYGPSDNP 268
>gi|253689429|ref|YP_003018619.1| von Willebrand factor type A [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756007|gb|ACT14083.1| von Willebrand factor type A [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 4678
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+YI ++ + + N + + + G GND +IG N++ + +G+D+
Sbjct: 4506 HSYIATHSAEFDLSSAKDGNDILNGGAGNDILFGQGGNDTLIGGEGNDLLYGGAGDDILI 4565
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
G G DT A + ++K + ++ D N + D +
Sbjct: 4566 GGPGGDTLIGGAGADIFKWQAGDIGNDVIKDFNAKEGDRI 4605
Score = 41.3 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D+L+ GG N I ++ G E N + + ++G G D +IG +
Sbjct: 4522 KDGNDILN----GGAGNDILFGQGGNDTLIGGEGNDLLYGGAGDDILIGGPGGDTLIGGA 4577
Query: 285 ANNVFF---ESSGNDVF 298
++F GNDV
Sbjct: 4578 GADIFKWQAGDIGNDVI 4594
>gi|329849530|ref|ZP_08264376.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
gi|328841441|gb|EGF91011.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
Length = 445
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G E + + T +++ ND + G S N+ F GND G +G DT A
Sbjct: 52 SLSGGEGDDVLEGATGSDTLNVGDANDSLEGGSGNDQLFGGDGNDTLVGGTGADTLVGGA 111
Query: 312 PSYLYKIYRFENAIIVYDANEH 333
+ +YKI + ++ D +
Sbjct: 112 GNDIYKIDNAGDVVVDTDESSW 133
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 4/105 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ GG+D L GG L + + +++ G GND +
Sbjct: 172 IFGGGGNDTL----RGGEGADEVLGGGGDDRLSEGTGDDYSFGGDGHDTLDGGEGNDCLF 227
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G+ + GND SG DT + LY I + +
Sbjct: 228 GDDGRDRLVGGEGNDTLFAGSGDDTMIGGEGNDLYYIDSAGDVFV 272
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 16/192 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT-ESWSSIGGYEKNMT 261
GN++Y I+ G + +L+G + L+ +++ G N
Sbjct: 258 GNDLYYIDSAGDVFVEGHDAGIDGIATNITFSLVGIQIENLSLHGVGAFNGTGNSLHNKM 317
Query: 262 IA--------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ +S+ G GND +IG + N+ NDV G SG D F +Y P
Sbjct: 318 LGNANANILDAGAGNDSINGGLGNDTLIGGTGNDTLLGQLDNDVLTGGSGADLFVFYKPF 377
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + I + + D+ + D ++ ++ L+
Sbjct: 378 GFFDPGDGIDTITDF------YNDRIDIRQYTRGVAKPDMISQAGSDVVIDF-GNGSLVT 430
Query: 374 VIGQDVFESMKH 385
V+ D + + H
Sbjct: 431 VLNADRADVLSH 442
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI------- 243
G+ ++G+ + ++ G+D L TL+GG N I
Sbjct: 67 GSDTLNVGD----ANDSLEGGSGNDQLFGGDGNDTLVGGTGADTLVGGAGNDIYKIDNAG 122
Query: 244 ----DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
D + SW I + +V+ + + GN+A N F GND
Sbjct: 123 DVVVDTDESSWDEIHTSISLVMSDSVSVVVVDRPDNAGLSITGNAAYNWIFGGGGNDTLR 182
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVK 357
G G D E Y D L E F D D +
Sbjct: 183 GGEGADEVLGGGGDDRLS----EGTGDDYSFGGDGHDTLDGGEGNDCLFGDDGRDRLVGG 238
Query: 358 QRSILEYTASYED 370
+ + + S +D
Sbjct: 239 EGNDTLFAGSGDD 251
>gi|126660424|ref|ZP_01731534.1| iron-regulated protein FrpC, putative [Cyanothece sp. CCY0110]
gi|126618290|gb|EAZ89049.1| iron-regulated protein FrpC, putative [Cyanothece sp. CCY0110]
Length = 2238
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 77/249 (30%), Gaps = 18/249 (7%)
Query: 200 GSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN+ K D TIY GG + +D G ++ I
Sbjct: 274 GGSGNDTIKAHAAYNDIYAGTGYDTIYAYGGANFIDANDDGLGDTIK--AYGGYNDIDAG 331
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N I ++ +GND + N + SG+D G +
Sbjct: 332 WGNDNITAAGGYNNIDAGNGNDTIYAYGGYNKIYARSGSDTIKAYGGGNEIDANDDGNAD 391
Query: 317 KIYRFENA-IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
IY A +I + + + + ++ + +I+ + +D+
Sbjct: 392 DIYAEGGANVIDTGSGSDRIEAYGGANVINASNGNNTIIVGGVANIVNAGSGNDDIEAYG 451
Query: 376 GQDVFESMK----HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR------- 424
G + ++ + E G + +Y Y+ +Y + GSD A
Sbjct: 452 GYNEIKAGAGDNRIYAEGGFNNIYAEGKSNYNYIEAYGGGNYIKGSDYQTALETVFTGFE 511
Query: 425 -HYITHGVK 432
Y++ G
Sbjct: 512 TKYVSFGWF 520
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 62/236 (26%), Gaps = 28/236 (11%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFI-----------QTIYDSGGDDLL-------DLTLIGG 238
A LG+ IY I G+D + D+ G
Sbjct: 126 ANDDGLGDTIYAAGGYNNIDAGWGNDNITAYGGYNDIDAGNGNDTITAGGGYNDIYARSG 185
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
++ + TI + ++ GND + N SGND
Sbjct: 186 YDTIYAYGGANFIDANDDGRGDTIKAYGGYNNIDAGWGNDNITAAGGYNDISAGSGNDTI 245
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD---------- 348
G + + + +++ N + N+ + + +
Sbjct: 246 YAYGGYNKVYASNGNDWVEVWGGGNKVYGGSGNDTIKAHAAYNDIYAGTGYDTIYAYGGA 305
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
ID+ + ++ Y D+ G D + + G D + Y
Sbjct: 306 NFIDANDDGLGDTIKAYGGYNDIDAGWGNDNITAAGGYNNIDAGNGNDTIYAYGGY 361
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 46/165 (27%), Gaps = 7/165 (4%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y IY GG +++D G + I+ + G+ N IA
Sbjct: 545 YGGANVIDAGSGNNDIYAEGGANVID---TGSGNDDIEAYGGANVIDAGFGNNKIIAGGA 601
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ SGND + NV +G + G + S I + A +
Sbjct: 602 AN-IIDTGSGNDNIQAYGGANVITAGNGTNTIIAGGGAN--VIDTGSGDDDIQAYGGANV 658
Query: 327 VYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYTASYED 370
+ N + +++ + +D
Sbjct: 659 IMAGNGTNTIIAGGAANVITTGSGKDTIAAAGGTNVIISGSGNDD 703
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 57/341 (16%), Positives = 100/341 (29%), Gaps = 40/341 (11%)
Query: 273 GSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTF-------FYYAPSYLY 316
G SGND + S + + SGND +G SG DT YA +
Sbjct: 54 GGSGNDTIKAYSGRSDLYGGSGNDYIEAWGISNYINGGSGNDTIKAHAAHNDIYAGTGYD 113
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
IY + A + ++ D + +I Y Y D+ G
Sbjct: 114 TIYAYGGANFIDANDDGLGDTI-----YAAGGYNNIDAGWGNDNITAYG-GYNDIDAGNG 167
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY--ITHGV-KE 433
D + + + G D + ++ D + D A Y I G +
Sbjct: 168 NDTITAGGGYNDIYARSGYDTIYAYGG--ANFIDANDDGRGDTIKAYGGYNNIDAGWGND 225
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLG 490
S D I A+ + + + + D+
Sbjct: 226 NITAAGGYNDISAGSGNDTIYAYGGYNKVYASNGNDWVEVWGGGNKVYGGSGNDTIKAHA 285
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+Y+D+ G D A Y + + ++ + D I+A ++ AG
Sbjct: 286 AYNDIYAGTGYDTIYA---YGGANFIDANDDGLGDTIKAYGGYND-IDAGWGNDNITAAG 341
Query: 551 KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
+ + G + Y+ ++ GSD A
Sbjct: 342 GYNNIDAGN------GNDTIYAYGGYNKIYARSGSDTIKAY 376
Score = 44.7 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 32/84 (38%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S + N I ++ G+D + + N SG+++F +TF
Sbjct: 1826 YSKVDAGVGNDLINVSGFFNTINAGEGDDTINSDGEYNTINGDSGDNLFYIGGDNNTFVG 1885
Query: 310 YAPSYLYKIYRFENAIIVYDANEH 333
+ Y + ++N + Y N+
Sbjct: 1886 GTGNDTYFLENWDNGLTAYIDNQG 1909
Score = 44.0 bits (102), Expect = 0.088, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 14/199 (7%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYID 244
+Q GA + GN I GDD + ++ + G N I
Sbjct: 614 IQAYGGANVITAGNGT----NTIIAGGGANVIDTGSGDDDIQAYGGANVIMAGNGTNTI- 668
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + + I TIA ++ SGND V+ NV +GND G
Sbjct: 669 IAGGAANVITTGSGKDTIAAAGGTNVIISGSGNDDVVVGGGLNVVVSGAGNDTIIAGGGA 728
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSI 361
+ + + N + + + D + +
Sbjct: 729 NVIYDSGGNNQMYGLAAGNVFVKTGSGTDTMAGIGGANIFTKVGSGDTNMYAGGAFNILT 788
Query: 362 LEYTASYEDLIQVIGQDVF 380
+ +D + +G+
Sbjct: 789 KVSDSYDDDTMIALGKGNL 807
Score = 41.6 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 38/148 (25%), Gaps = 8/148 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G G D+++ N+F GND G + F N I +
Sbjct: 1721 VSGGDGEDILLAGGQTNIFLGGEGNDTIFGVGKNNIVFGGNGDDWMFAGGKSNYFIDFYG 1780
Query: 331 NEHKQDFLSDVERLRFADQCIDSV--------NVKQRSILEYTASYEDLIQVIGQDVFES 382
E + F D + + T Y + +G D+
Sbjct: 1781 KEMVINVGISNYIYTFDDSDTIESFGINNKINSGDGDDTITTTDIYSKVDAGVGNDLINV 1840
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDD 410
F EG D Y D
Sbjct: 1841 SGFFNTINAGEGDDTINSDGEYNTINGD 1868
Score = 40.9 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 31/133 (23%), Gaps = 9/133 (6%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-------- 296
L Y N I + + SGN+ + NV SGND
Sbjct: 525 LTPTYGQVTVAYNGNDEIKAYGGANVIDAGSGNNDIYAEGGANVIDTGSGNDDIEAYGGA 584
Query: 297 -VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
V D G + + + + I Y + +
Sbjct: 585 NVIDAGFGNNKIIAGGAANIIDTGSGNDNIQAYGGANVITAGNGTNTIIAGGGANVIDTG 644
Query: 356 VKQRSILEYTASY 368
I Y +
Sbjct: 645 SGDDDIQAYGGAN 657
Score = 40.9 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 10/175 (5%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
L+L DL+ S+ + ++ +A V G+ G+D+++ NN+ F
Sbjct: 1577 LSLPDLSALMPDLSRFSF-DLYTDNGDLLLAGG-KNNVVSGALGDDILVSAGKNNIMFGG 1634
Query: 293 SGNDVFDGSSGLDT--------FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
GND+ G+ + A + + ++ +V + + + +
Sbjct: 1635 EGNDIVFGAGQNNAVLSDEGNDLILTAGQSNFVLSGSDDDTVVAAGQTNIIATGTGNDLV 1694
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + I+ + G+D+ + F EG D F
Sbjct: 1695 FSLGKSNNILAQEGNDIVIGLGQSNRVSGGDGEDILLAGGQTNIFLGGEGNDTIF 1749
>gi|148653749|ref|YP_001280842.1| triacylglycerol lipase [Psychrobacter sp. PRwf-1]
gi|148572833|gb|ABQ94892.1| Triacylglycerol lipase [Psychrobacter sp. PRwf-1]
Length = 622
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + TI ++ G GNDV+ G N+ + + G+D DG +G D
Sbjct: 484 VFGRDGDDTIQGTKGNNTLHGGEGNDVLYGLGGNDKLYGAEGDDRLDGGAGNDWLIGGIG 543
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + + + D N D+ + N S D++
Sbjct: 544 NDTFVVNNNAGSDTILDFNN-------DIGYHDIIEFSSSLFNDLTSLASHTIQSKADVL 596
Query: 373 QVIGQD 378
+ +
Sbjct: 597 VALNAN 602
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 34/84 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + N T+ + + G GND + G ++ +GND G G DTF
Sbjct: 492 TIQGTKGNNTLHGGEGNDVLYGLGGNDKLYGAEGDDRLDGGAGNDWLIGGIGNDTFVVNN 551
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
+ I F N I +D E
Sbjct: 552 NAGSDTILDFNNDIGYHDIIEFSS 575
Score = 41.3 bits (95), Expect = 0.57, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
Query: 251 SSIGGYEKNMT-IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S + + I + + G D + +++ +G D DG+ G D
Sbjct: 335 SHTSSHYGSAAFIVGSEHNDLIAGGKNFDYIDAGLGDDIIKAGTGVDHVDGNEGHDQIRI 394
Query: 310 YAPSYLYKIYRFENAIIVY-DANEHKQDFLSDVERLRFADQCIDSVN 355
S + +++ + + + D ++VE + F + +N
Sbjct: 395 EGRSGDWDVFKMADDTLFFLDKKGTNLVEANNVESVSFNGELASHLN 441
>gi|296217250|ref|XP_002754912.1| PREDICTED: matrix metalloproteinase-26-like [Callithrix jacchus]
Length = 258
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 65/192 (33%), Gaps = 55/192 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKF 81
W Y + Y+ + ++ A+ WS V L F++ +DIK
Sbjct: 96 WDKYTLTYRIINYPHDMKPSTV-------KDSIYNAVSIWSSVTSLIFQQVQNEDADIKI 148
Query: 82 IS------------SNNGYVCTPR-YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
G++ +S ++FDK + W G L A HEI
Sbjct: 149 SFWQWDHDDCWPFDGPGGFLGHAFLPNSENPGVVHFDKDEHWS-ASNTGFNLFLVATHEI 207
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMV- 185
GH+LGL H G+ N S+M +Y+ + T +
Sbjct: 208 GHSLGLKHSGNRN-------------------SIMYPTYW----------YHDPRTFHLS 238
Query: 186 -SDIVAVQKIYG 196
DI +Q +YG
Sbjct: 239 ADDIQRIQGLYG 250
>gi|163742122|ref|ZP_02149510.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
gi|161384452|gb|EDQ08833.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
Length = 785
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 32/193 (16%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+ + + I GG+D + L G +++D N ++
Sbjct: 206 GDRVDNGDAADGSQD--DVIVAGGGNDTV---LAGEGDDFVD----------AGTGNDSV 250
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G G D++ G + N++ D +G +G DT A +
Sbjct: 251 EGGAGNDTLFGGGGRDLLQGGAGNDLLQGGIDGDTLEGGAGRDTLEGGAGNDSLSSGDDN 310
Query: 323 NAIIVYD-----ANEHKQDFLSDVE-----------RLRFADQCIDSVNVKQRSILEYTA 366
+ ++ D + D L + L +A + D V + + L Y
Sbjct: 311 DLLLGGDGDDTITAGYGDDTLYGGDGNDRLEGLYGNDLIYAGEGDDHVFGRDQDDLIYGE 370
Query: 367 -SYEDLIQVIGQD 378
+ LI +G D
Sbjct: 371 GGNDTLIGSMGTD 383
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 48/165 (29%), Gaps = 16/165 (9%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI GDD L GG N + G N I + V G +D++
Sbjct: 321 TITAGYGDDTL----YGGDGND---------RLEGLYGNDLIYAGEGDDHVFGRDQDDLI 367
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G N+ S G D G +G D + ++ + + + FL D
Sbjct: 368 YGEGGNDTLIGSMGTDTVWGGAGNDILAGSQGNDEIHGGDGDDLAFIGVYEDSDRIFLDD 427
Query: 341 VERLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A + ++ + L+ G D
Sbjct: 428 GNDFLDGGSAGSSFYGEGGRGNDVMNSGVGNDTLLGGEGYDRLSG 472
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 13/124 (10%)
Query: 204 NNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--------SWSSI 253
+ ++ S I+ GDD L + + I L+ + SS
Sbjct: 383 DTVWGGAGNDILAGSQGNDEIHGGDGDD-LAFIGVYEDSDRIFLDDGNDFLDGGSAGSSF 441
Query: 254 GG--YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N + ++++G G D + G + + S +DV +G G DT
Sbjct: 442 YGEGGRGNDVMNSGVGNDTLLGGEGYDRLSGGTGGDSLDGGSEDDVIEGGGGADTLIGGT 501
Query: 312 PSYL 315
+
Sbjct: 502 GADS 505
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 9/128 (7%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ G D L + +L G N + L + +I + T+ + + G
Sbjct: 284 DTLEGGAGRDTLEGGAGNDSLSSGDDNDLLLGGDGDDTITAGYGDDTLYGGDGNDRLEGL 343
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND++ ++ F +D+ G G DT + + A A
Sbjct: 344 YGNDLIYAGEGDDHVFGRDQDDLIYGEGGNDTLIGSMGTD----TVWGGAGNDILAGSQG 399
Query: 335 QDFLSDVE 342
D + +
Sbjct: 400 NDEIHGGD 407
Score = 45.1 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 37/122 (30%), Gaps = 27/122 (22%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
IY GG+D L T+ GG N I + G + N I +
Sbjct: 367 IYGEGGNDTLIGSMGTDTVWGGAGNDI---------LAGSQGNDEIHGGDGDDLAFIGVY 417
Query: 277 --NDVVIGNSANNVFFESS-----------GNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+D + + N+ S GNDV + G DT +
Sbjct: 418 EDSDRIFLDDGNDFLDGGSAGSSFYGEGGRGNDVMNSGVGNDTLLGGEGYDRLSGGTGGD 477
Query: 324 AI 325
++
Sbjct: 478 SL 479
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 36/117 (30%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
GS G++ Y + G+D+++ N
Sbjct: 435 GSAGSSFYGEGGR--------------GNDVMN----------------------SGVGN 458
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
T+ + + G +G D + G S ++V G D G +G D+ + L+
Sbjct: 459 DTLLGGEGYDRLSGGTGGDSLDGGSEDDVIEGGGGADTLIGGTGADSLYGDDDRDLF 515
>gi|158300836|ref|XP_320653.4| AGAP011870-PA [Anopheles gambiae str. PEST]
gi|157013353|gb|EAA00126.4| AGAP011870-PA [Anopheles gambiae str. PEST]
Length = 541
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 18/123 (14%)
Query: 38 HRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEET-SIHSDI------KFISSNNGYV 89
++ ++EL+ + + ALG W++ ++ F E S +DI KF +
Sbjct: 10 SLVNQTMSELDAGQVRRILHEALGLWAQHANINFREVYSTDADIQVMFARKFHGDGYNFD 69
Query: 90 CTPRYDSRYFM-------EINFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGS 139
+ + F + +FD + W +GT L A+HE GH+LGL H
Sbjct: 70 GPGKILAHAFYPGTGIGGDAHFDADEKWLLNEPLDAEGTRLFDVAVHEFGHSLGLGHSSQ 129
Query: 140 YNG 142
+
Sbjct: 130 QDA 132
>gi|329850369|ref|ZP_08265214.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
gi|328840684|gb|EGF90255.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
Length = 752
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 11/187 (5%)
Query: 225 SGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G D LD LIG N L + + G N T+A + +++ G GND + G
Sbjct: 509 GSGTDWLDDIENLIGSELNDNLLGDGADGVMQGLGGNDTVAGSSGHDTISGDDGNDNLSG 568
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-------NEHKQ 335
+ N+V G+D+ +G D+ A+ V A
Sbjct: 569 GTGNDVLMAGDGDDLIQAGAGDDSIDGGLGLDTMSYSTATAAVTVDLALAVSQATGGAGS 628
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSE 393
D L +E L + + L+ A + L G+D+ + FG+
Sbjct: 629 DMLQAIEGLIGSGHNDTLSGDGGDNNLDGRAGNDILNGGAGKDILSGKAGLDIFLFGIGS 688
Query: 394 GRDITFD 400
G D+ D
Sbjct: 689 GLDVIND 695
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 22/183 (12%)
Query: 219 IQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI--AQHTVI-- 268
IY GDD L D+ G + I + S GG + A + I
Sbjct: 380 FFKIYTGSGDDTLVGTAHDDVIETGSGDDSITGGDGNDSITGGLGYDFIDGGAGNDTIWV 439
Query: 269 --------ESVVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++ G GND + G + ++V +GND G G DT Y + +
Sbjct: 440 AQPDISEGDTLYGGDGNDALYGTRTGDDVLMGGAGNDSIYGHFGNDTVSYADATAGVTVD 499
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D+L D+E L ++ + + +++ + + G D
Sbjct: 500 LN---LATQATGGSGTDWLDDIENLIGSELNDNLLGDGADGVMQGLGGNDTVAGSSGHDT 556
Query: 380 FES 382
Sbjct: 557 ISG 559
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 10/160 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL----TLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQ 264
T GG+DL T + G L+ + G E N +I
Sbjct: 164 NDTFIGGSGSDTFLGGGGNDLATGGSGETYLSGGAGNDTLSGGGGVDRLSGNEGNDSITG 223
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--- 321
T + + G GND + GN+ N+ S G+D+ + +SG + ++ +
Sbjct: 224 GTHNDFLHGDWGNDTLFGNTGNDRLEGSDGDDLLNDTSGANILQGHSGNDTITAGNGNDS 283
Query: 322 --ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
NA D + D + + S
Sbjct: 284 IWGNAGADLIEAAGGNDTIYDDDSVSTRGNDTISAGGGDD 323
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 8/188 (4%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T + I + + N T + ++ +G GND+ G S +
Sbjct: 140 TGVTLADGTI-IRNVERAHFDAGLGNDTFIGGSGSDTFLGGGGNDLATGGSGETYLSGGA 198
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQC 350
GND G G+D + + + + D L + +RL +D
Sbjct: 199 GNDTLSGGGGVDRLSGNEGNDSITGGTHND----FLHGDWGNDTLFGNTGNDRLEGSDGD 254
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ +IL+ + + + G D + G D +D +D
Sbjct: 255 DLLNDTSGANILQGHSGNDTITAGNGNDSIWGNAGADLIEAAGGNDTIYDDDSVSTRGND 314
Query: 411 LRNVFGSD 418
+ G D
Sbjct: 315 TISAGGGD 322
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 63/196 (32%), Gaps = 31/196 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI---GGYEKNM 260
+ IY + + TI GGDD++ +L GG ID S GG +
Sbjct: 300 DTIYDDD--SVSTRGNDTISAGGGDDIV--SLWGGADA-IDAGAGQDSFTLWYGGLSDDF 354
Query: 261 TI-------------AQHTVIESV-----VGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + TVI + SG+D ++G + ++V SG+D G
Sbjct: 355 LIDVSQAHTSAGSIFSTGTVIRNAEFFKIYTGSGDDTLVGTAHDDVIETGSGDDSITGGD 414
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D+ + I V + + D L + +L
Sbjct: 415 GNDSITGGLGYDFIDGGAGNDTIWVAQPDISEGDTLYGGD-----GNDALYGTRTGDDVL 469
Query: 363 EYTASYEDLIQVIGQD 378
A + + G D
Sbjct: 470 MGGAGNDSIYGHFGND 485
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 6/157 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI-----ESVVGS 274
+I G D + + +DL + GG +M A +I +++ G
Sbjct: 591 DSIDGGLGLDTMSYSTAT-AAVTVDLALAVSQATGGAGSDMLQAIEGLIGSGHNDTLSGD 649
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G++ + G + N++ +G D+ G +GLD F + S L I F
Sbjct: 650 GGDNNLDGRAGNDILNGGAGKDILSGKAGLDIFLFGIGSGLDVINDFSATDGDLINVNAY 709
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ + + +I + AS D+
Sbjct: 710 TGGVASPGAVTQTGSSVTIDLGGGNAITVFNASQADV 746
>gi|237747941|ref|ZP_04578421.1| predicted protein [Oxalobacter formigenes OXCC13]
gi|229379303|gb|EEO29394.1| predicted protein [Oxalobacter formigenes OXCC13]
Length = 1843
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 46/126 (36%), Gaps = 7/126 (5%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G + + + ++G +G+D ++G N++ F SGND G G +
Sbjct: 1650 EGHLEGSGHGNGGDLLYGGSGDDVLIGGAGHDTLVGGDGNDILFGGSGNDTLIGGHGDNI 1709
Query: 307 FFYYAPSYLYKIYRF-------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ + +K ++I + + +D +D+ L+ D ++
Sbjct: 1710 LTGGSGNDTFKYNAGDLEGKTHGDSITDFHVGDVAKDGNADILDLKDLLTGADKLSGGAS 1769
Query: 360 SILEYT 365
++
Sbjct: 1770 DLISGG 1775
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYE-KNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D LD + + I + ++ ++ ++ + +E +G D++ G S ++
Sbjct: 1613 DHLDFSAGHELGQNIGVLGDALHNMNAHDLNDFANWAEGHLEGSGHGNGGDLLYGGSGDD 1672
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
V +G+D G G D F + + +N + N+
Sbjct: 1673 VLIGGAGHDTLVGGDGNDILFGGSGNDTLIGGHGDNILTGGSGND 1717
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 10/35 (28%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + +GND+ G G D
Sbjct: 1564 NGMADALIGGAGNDILYGQGGNDILIADGSHDSLT 1598
>gi|86140564|ref|ZP_01059123.1| hypothetical protein MED217_15470 [Leeuwenhoekiella blandensis
MED217]
gi|85832506|gb|EAQ50955.1| hypothetical protein MED217_15470 [Leeuwenhoekiella blandensis
MED217]
Length = 279
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 24/190 (12%)
Query: 23 WSNYFIRYKP---DVLTTHRLSFDITELNPNAQEVARWALGEWSKVV-----DLTFEETS 74
+ Y + P +V+ L F+ L Q+ A+ ++ + +LTF
Sbjct: 97 YRTYNLVTSPRVIEVIGYTGLGFNQN-LTALQQDALTEAVANYNDLNLGLSFNLTFTNDL 155
Query: 75 IHSDIKFISSNNGYVC----TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
++DI + NG P + Y + + + + H HEIGH
Sbjct: 156 TNADIIVFQNPNGAAGGVAGFPSAGNPYLYVQIYSGMENYSLEVNT-----HVMTHEIGH 210
Query: 131 ALGLMHPGSYNG---GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT--PMV 185
LGL H + G P +G + + Y + +S+M + FG T
Sbjct: 211 TLGLRHTDWFTRQSCGRPSFGELANPSGAVHIPGTP-YRLDPNSVMLSCFGLDETGEFGR 269
Query: 186 SDIVAVQKIY 195
DIVA++ +Y
Sbjct: 270 YDIVALEYLY 279
>gi|307315782|ref|ZP_07595297.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|306898574|gb|EFN29246.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 534
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 9/179 (5%)
Query: 220 QTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI G D + D+ ++L T G + ++ IE+V ++
Sbjct: 239 DTINGGAGVDTVRYDRDVAQGASKGVSVNLTTGVAIDSFGSQDTLS-----SIENVRATN 293
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D ++GNS +N +G D DG +G D A Y + + + N
Sbjct: 294 FKDTIVGNSDSNFLRAFAGADTLDGKAGADRMRGGAGDDTYYVDNAGDIVDESLDNGAGI 353
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D + A+ +V++ ++ A + +
Sbjct: 354 DMVRSSVSFDLANSTAVKGSVERLALQGSGAINGSGNALSNGLTGNGAANTLNGAAGND 412
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 35/93 (37%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ GS+G+D + G N++ + G+D G G DT+ A NA +
Sbjct: 127 DTINGSAGDDDISGRGGNDILNGNDGDDTITGGEGDDTYDGGAGFDTLSFQDAYNAPTAF 186
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ +++ F++ +
Sbjct: 187 RGINLNAATGTVIDQFGFSETFQNFEQYGGTQF 219
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 11/203 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++ Y ++ +++ + G D++ ++ + N + S +
Sbjct: 327 GGAGDDTYYVD--NAGDIVDESLDNGAGIDMVRSSVSFDLANSTAVK-GSVERLALQGSG 383
Query: 260 MTIAQHTVIESVVGSSGN-DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + +G + + G + N+ GND GS+GLDTF + +
Sbjct: 384 AINGSGNALSNGLTGNGAANTLNGAAGNDFINGGLGNDTLIGSTGLDTFIFSSALNAASN 443
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ +V D + ++ FA + T D I +
Sbjct: 444 VDTISDFVV-------ADDVMWIDNAVFAGVVGTGALTAAQFASNTTGLAADTDDRIIYE 496
Query: 379 VFESMKHFYEFGLSEGRDITFDS 401
+ G G + F +
Sbjct: 497 SDTGKLFYDSDGNGAGGSVHFAT 519
>gi|166364896|ref|YP_001657169.1| Na-Ca exchanger/integrin-beta [Microcystis aeruginosa NIES-843]
gi|166087269|dbj|BAG01977.1| Na-Ca exchanger/integrin-beta [Microcystis aeruginosa NIES-843]
Length = 1049
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/251 (16%), Positives = 90/251 (35%), Gaps = 34/251 (13%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG---NNIYKIEVQQKDSPFIQTIYDSGG 227
+ +F T + DI G G + + + + + + G
Sbjct: 801 TNGTLTFHPGTTALTLDI--------PIVGDTGLEFDESFSVNLTNPNGAIL-------G 845
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D ++T++ N + + G N A + + G G+D + G + ++
Sbjct: 846 TDRGNVTILNDDVN-------ALPTFVGTSGNDVFAGGDDNDIINGREGDDNLNGGAGDD 898
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ G DV G +G DTF Y ++ ++ + + ++ +E + +L F
Sbjct: 899 ILNGGPGKDVLTGGTGADTFVY--QNFTDSLFANPDRLRSFNPDEGDRIYLVTTPDATFN 956
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
I + N+ + L Y + + + V +++ F+ FG + T YL
Sbjct: 957 AGIISAANLTEAVNLAYADADPNTPGMQTLGVNQAV--FFSFGAT-----TTTRRSYLAV 1009
Query: 408 YDDLRNVFGSD 418
D++ +
Sbjct: 1010 NDNISGYNAAS 1020
>gi|89067955|ref|ZP_01155399.1| type I secretion target repeat protein [Oceanicola granulosus
HTCC2516]
gi|89046553|gb|EAR52609.1| type I secretion target repeat protein [Oceanicola granulosus
HTCC2516]
Length = 818
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 12/181 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
Q + T+ G D +L GG + + G + N + +
Sbjct: 424 NDQMRGGAGRDTMSGGSGRD----SLHGGSEADYLSGGAEADHLAGGDDNDVLHGDEGND 479
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +GND + G ++ +GND +G G D+ A + I
Sbjct: 480 RLDGGAGNDTLYGGHGDDTLAGGTGNDTLEGGDGNDSLAGDAGDDTLGGGLGADTI---- 535
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D + E AD + + + I IG + E+ +
Sbjct: 536 SGGAGNDTIIFAE----ADSVEGGDGDDLFVLEDLGEANNGTITAIGGEGDETHGDTLQL 591
Query: 390 G 390
G
Sbjct: 592 G 592
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 25/173 (14%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF- 289
+D + + L + ++ + + ++ I+++ G G DV+ G S N++
Sbjct: 342 IDYDNLSSGGQAVYLTDIHYRTMASVDDDDSLYGGAGIDTIYGGGGADVIDGGSGNDLLH 401
Query: 290 -----------------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+GND G +G DT + + Y +
Sbjct: 402 GDGGDDIIDGGTGDDRITGGAGNDQMRGGAGRDTMSGGSGRDSL----HGGSEADYLSGG 457
Query: 333 HKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQDVFES 382
+ D L+ + + D+ D ++ + Y +D L G D E
Sbjct: 458 AEADHLAGGDDNDVLHGDEGNDRLDGGAGNDTLYGGHGDDTLAGGTGNDTLEG 510
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTI-----AQHTVIESVVGSSGNDVVIGNSANNVFFES 292
I + + +I G N I A + +++ SGND+V G N+
Sbjct: 88 SYDTTITGSDGTDETILGDGGNDEIHGSSNAGDSGRDTIDAGSGNDLVYGGGGNDALVGG 147
Query: 293 SGNDVF 298
G+D
Sbjct: 148 GGSDTV 153
Score = 38.2 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 23/185 (12%), Positives = 44/185 (23%), Gaps = 43/185 (23%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + D +TI GG+D + + G
Sbjct: 89 YDTTITGSDGTD-ETILGDGGNDEIHGSSNAG---------------------------- 119
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------KIYR 320
SG D + S N++ + GND G G DT + +
Sbjct: 120 -------DSGRDTIDAGSGNDLVYGGGGNDALVGGGGSDTVHGGDGDDIIYGDDWRTVAG 172
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D + + + + S + G+ +
Sbjct: 173 SDESFNWSSVAASGTDVRGGI-AEDAGGMIVSVGFTDDGNASAFEISNQTQYTATGEPMA 231
Query: 381 ESMKH 385
+
Sbjct: 232 TNSGL 236
>gi|300696863|ref|YP_003747524.1| hemolysin-type Ca2+-binding protein-RTX toxin (modular protein)
[Ralstonia solanacearum CFBP2957]
gi|299073587|emb|CBJ53107.1| putative hemolysin-type Ca2+-binding protein-RTX toxin (modular
protein) [Ralstonia solanacearum CFBP2957]
Length = 647
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 69/197 (35%), Gaps = 24/197 (12%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+Y + +P + D +L + +DL S++ GY +N IA
Sbjct: 264 GTVYSDSIGGAVTPGGTDL----NQDKYNLGGW-FLGGVLDL--GLDSNLYGYLQN-GIA 315
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
V SGND +IG S N+ + G+D G G D Y +
Sbjct: 316 Y-------VAGSGNDKIIGTSRNDALYGGDGDDTLLGGIGNDMLAGGNGFDSYIVDAQSG 368
Query: 324 AIIVYDANEHKQDFLSDV------ERLRFADQCIDSVNVKQRSI---LEYTASYEDLIQV 374
+ ++ DA+ Q D+ L I + +Y+ +DL
Sbjct: 369 SDVIVDADGLGQIVFGDLPLTGVGRLLTQTSSSILWSESLSSGLEVRYDYSQKSKDLTIT 428
Query: 375 IGQDVFESMKHFYEFGL 391
IG + ++++F L
Sbjct: 429 IGNESSVTVRNFESGAL 445
>gi|172037110|ref|YP_001803611.1| hypothetical protein cce_2195 [Cyanothece sp. ATCC 51142]
gi|171698564|gb|ACB51545.1| hypothetical protein cce_2195 [Cyanothece sp. ATCC 51142]
Length = 605
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 7/140 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ S GDD +D L G + I+ + + G+ N I
Sbjct: 60 NDNINAGDGNDFVFSSFGDDTIDGGEGDDLIFSGFGDDQINGANGNDAIFSGF-GNDNID 118
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ V GND V G + + GND DG G D A + +
Sbjct: 119 AGDGNDFVNAGKGNDFVFGGAGVDTLDGGKGNDTVDGGKGNDIMNGGAGNDRLIWNNGDG 178
Query: 324 AIIVYDANEHKQDFLSDVER 343
+ I+ + ++D E
Sbjct: 179 SDILDGGKGYDISEVNDAES 198
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 8/137 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I + I +++ GND V + ++ G+D+ G D
Sbjct: 44 TIDAGGGDDAIFSGFGNDNINAGDGNDFVFSSFGDDTIDGGEGDDLIFSGFGDDQINGAN 103
Query: 312 PSYLYKIYRFENAIIVYDANEH-----KQDFL---SDVERLRFADQCIDSVNVKQRSILE 363
+ + I D N+ DF+ + V+ L K I+
Sbjct: 104 GNDAIFSGFGNDNIDAGDGNDFVNAGKGNDFVFGGAGVDTLDGGKGNDTVDGGKGNDIMN 163
Query: 364 YTASYEDLIQVIGQDVF 380
A + LI G
Sbjct: 164 GGAGNDRLIWNNGDGSD 180
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 5/151 (3%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D+ I SGGDD L + + D+ ++S G + +T I
Sbjct: 395 DADNVEAFEINASGGDDRLTVNDLSNT----DVEQVNFSGGEGNDFLNASGTNTPI-FAD 449
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D++IG N+ +G+D+ G G D + + + +
Sbjct: 450 GGVGDDILIGGGGNDTIIGGAGSDLIIGGGGNDVLIGGDGADAFGFDSNAAFDLNDIGSN 509
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
QDF +++ +++ E
Sbjct: 510 EIQDFQVGEDQIILDKTVFAALSSGAGDGFE 540
Score = 45.1 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 17/152 (11%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI----GGYEKN 259
+N+ E+ T+ D D+ + GG N D+ S + G +
Sbjct: 227 DNVEAFEINASGGDDRLTVNDLSNTDVEQVNFSGGEGN--DVLDGSQTDTTLVADGGVGD 284
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDTFFYY 310
+ +++ G +GND V+G + GND+ +G +G D +
Sbjct: 285 DLLQGGNAADTLNGGAGNDTVLGGGGIDELNGGDGDDIIDGQKGNDIMNGGAGNDRLIWN 344
Query: 311 APSYLYKIYRFENAII--VYDANEHKQDFLSD 340
+ + I V DA DF+
Sbjct: 345 NGDGSDILDGGKGYDISEVNDAEAAGDDFVLG 376
Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 36/139 (25%), Gaps = 3/139 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N TI + + G D++ +++ F G+D D G D F +
Sbjct: 2 AQVDNDTIVGGEQGDVIFGGFDADLIETGDGSDLIFSGFGDDTIDAGGGDDAIFSGFGND 61
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDLI 372
N + + D + + F D I+ N + D
Sbjct: 62 NINAGD-GNDFVFSSFGDDTIDGGEGDDLIFSGFGDDQINGANGNDAIFSGFGNDNIDAG 120
Query: 373 QVIGQDVFESMKHFYEFGL 391
F G
Sbjct: 121 DGNDFVNAGKGNDFVFGGA 139
>gi|166362825|ref|YP_001655098.1| hypothetical protein MAE_00840 [Microcystis aeruginosa NIES-843]
gi|166085198|dbj|BAF99905.1| hypothetical protein MAE_00840 [Microcystis aeruginosa NIES-843]
Length = 858
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 6/143 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + + + +D N I G + N TI T + + G +GND +IG
Sbjct: 671 GADSITGSTGDDNLSGLDGNDT----INGGDGNDTINGGTGADIISGGTGNDNIIGLGGF 726
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ + SGND +GS+G+DT + + + + +QD ++
Sbjct: 727 DLIYGGSGNDTINGSNGIDTIVGGFGND--SLTGGGGDTFRFLSIYDQQDVITGFNDTIV 784
Query: 347 ADQCIDSVNVKQRSILEYTASYE 369
D S S T +Y
Sbjct: 785 FDITGASAFTSLGSGALGTTTYT 807
>gi|84500051|ref|ZP_00998317.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
gi|84391985|gb|EAQ04253.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
Length = 659
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 10/144 (6%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG +G + + +I G D + V+ IDL + S
Sbjct: 473 YGGAATIMGGD---GDDTINAGTGADSIDGGAGIDTVRYANTSAVQ--IDLAAGTGSGFA 527
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
E ++ + +E+VVGS+ D + G+ N G D G G D +
Sbjct: 528 A-EGDIFVN----VENVVGSNAGDTLTGDDQANRLEGLYGEDTIKGGLGNDVLLGGGNAD 582
Query: 315 LYKIYRFENAIIVYDANEHKQDFL 338
+ + + D +
Sbjct: 583 TFVFDAAGFGRDLILDWQDNYDKI 606
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 58/159 (36%), Gaps = 12/159 (7%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ G D G I+L T + GG + T + IE++VGS D
Sbjct: 320 ADNLIGGAGIDT--ARYAGSAAVTINLATNTA--TGGEAEGDTF---SGIENLVGSQNAD 372
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK---- 334
++ G++ N F G+DVF G G DT + +AI V
Sbjct: 373 ILTGDANANRFEGLGGDDVFQGGLGADTMIGHLGIDTADYSDSASAIEVGIHRTGVGGTA 432
Query: 335 -QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D L +ER+ + D V I+E + +I
Sbjct: 433 DGDVLIYMERIIGSAFGDDLVGGGTAPIIEGAGGNDTII 471
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 5/116 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + + GND + + +++ SG+D DG +G DT Y
Sbjct: 180 IEGTTGDDDFVATSFADIIQADLGNDTIDAGAGDDMIDGGSGSDSMDGGAGDDTVTYENA 239
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYT 365
+ V ++ D L+++E FAD I S + L
Sbjct: 240 ASGAMRLSLGGTAGVGGQSDG--DVLTNIEHAIGSNFADTIIGSTLANTLNGLGGA 293
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 51/158 (32%), Gaps = 13/158 (8%)
Query: 253 IGGYEKNMTIAQHT--VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
IG + + T +IE G+ GND +I G+D + +G D+
Sbjct: 444 IGSAFGDDLVGGGTAPIIE---GAGGNDTIIDYGGAATIMGGDGDDTINAGTGADSIDGG 500
Query: 311 APSYLYKIYRFENAIIVYDANEHK-----QDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A + I A D +VE + ++ Q + LE
Sbjct: 501 AGIDTVRYANTSAVQIDLAAGTGSGFAAEGDIFVNVENVVGSNAGDTLTGDDQANRLEGL 560
Query: 366 ASYEDLIQVIGQDVFESMKHFYEF---GLSEGRDITFD 400
+ + +G DV + F GRD+ D
Sbjct: 561 YGEDTIKGGLGNDVLLGGGNADTFVFDAAGFGRDLILD 598
>gi|113475313|ref|YP_721374.1| hypothetical protein Tery_1623 [Trichodesmium erythraeum IMS101]
gi|110166361|gb|ABG50901.1| hypothetical protein Tery_1623 [Trichodesmium erythraeum IMS101]
Length = 613
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G E N +I + +S+ G+ GND + GN N+ F + GND G+ G D +
Sbjct: 373 SIFGNEGNDSIFGNEENDSIFGNEGNDSIFGNEGNDSIFGNEGNDSIFGNQGNDCL--ES 430
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
S I + IV + DFL ++L D K ++
Sbjct: 431 NSGDDTIRGGKGDDIVDGGFDL--DFLLGELGNDQLSGGDGDDLIFGGKDDDLIFGGGGN 488
Query: 369 EDLIQVIGQD 378
+ L + D
Sbjct: 489 DTLNGDMNND 498
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 9/186 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ +I+ + G+D + + ++ G N + +I G + + +
Sbjct: 389 NDSIFGNEGNDSIFGNEGNDSIFGNEGNDSIFGNQGNDCLESNSGDDTIRGGKGDDIVDG 448
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++ ++G GND + G +++ F +D+ G G DT + I + N
Sbjct: 449 GFDLDFLLGELGNDQLSGGDGDDLIFGGKDDDLIFGGGGNDTLNGDMNND-TIIGQLGND 507
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
I+ + + ++ +++ L ++ V A D V + ES K
Sbjct: 508 FIIGTSLKSGEN---EIDFLIGSEGTDTFVLGNSNVAFYSFAGSSDYAVVTDLNNLESDK 564
Query: 385 HFYEFG 390
G
Sbjct: 565 MIVFGG 570
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 7/123 (5%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+I + + + G+ +D V G N+ GND G+SG D+ +
Sbjct: 184 SIIGNNSTQFIQGTFNSDTVFGFGGNDTIDGQDGNDSLFGNSGSDSIVGGIDDDI----I 239
Query: 321 FENAIIVYDANEHKQDFLSDVER---LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
F N I + D + E L + ++ + + L +G
Sbjct: 240 FGNVGIDTIDGQDGNDSILGNEDDDILGGGEDNDTIRGNTGSDEIDGGSGDDGLYGNVGS 299
Query: 378 DVF 380
D
Sbjct: 300 DSI 302
>gi|254500524|ref|ZP_05112675.1| animal heme peroxidase superfamily protein [Labrenzia alexandrii
DFL-11]
gi|222436595|gb|EEE43274.1| animal heme peroxidase superfamily protein [Labrenzia alexandrii
DFL-11]
Length = 689
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+L + I + + + +D G D L+G + + L + G
Sbjct: 505 STTLADVIERNTDIRSIQDNVMLAHDRLGGTNRDDALVGSEERDLILGNRGNDVLDGAGG 564
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + G +GND++ G N+V +GND DG G D F + +
Sbjct: 565 DDQLEGQDGNDVLFGQAGNDILYGGDGNDVLVGGTGNDTLDGGRGSDAFVFDGAFGSDTV 624
Query: 319 YRFENA 324
F +
Sbjct: 625 TDFSTS 630
>gi|254465629|ref|ZP_05079040.1| integrins alpha chain [Rhodobacterales bacterium Y4I]
gi|206686537|gb|EDZ47019.1| integrins alpha chain [Rhodobacterales bacterium Y4I]
Length = 1370
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY----RFEN 323
IE+ +G SG+D +IGN +N GND DG +G D Y++ +
Sbjct: 329 IENAIGGSGDDAIIGNDLDNRIGSGGGNDTIDGGNGFDHLLLPGEPDDYEVIYDTSTDDG 388
Query: 324 AIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I+ + N + + L +E L F + + A+ + +I
Sbjct: 389 TFILCEINGNGSNDLRIKSIEGLIFPNAERLLSSYTGYIDRFVNANNDPVIG 440
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 72/264 (27%), Gaps = 35/264 (13%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I Q + +I I +G D + N +D + G N I
Sbjct: 675 IDGFGDQDSFNGWIANIEGTGSADYI-------QGNTLDNR------LHGGAGNDEIRGG 721
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G SG+DV+ G NN G+D + G + FF + Y
Sbjct: 722 DGDDHLFGDSGDDVLAGQGGNNRLSGGDGDDTLISTGGSNVFFGGNGDDEFLFYAGGTNT 781
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE------DLIQVIGQDV 379
I QD L + +N + V G
Sbjct: 782 I--GDFNVGQDRLQFSPGISLGSMTETDINNDGTQDTVLQMQNGLTVNLLSVNGVSGIGA 839
Query: 380 FESMKHFYEFGL-SEGRDITFDSYLYLGSYDDLR---------NVFGSDRG---AAARHY 426
FG G D S + S D+ FG+D A Y
Sbjct: 840 LTGQTLPETFGSVFRGIDGADFSGFSVSSAGDVNGDGFYDVIIGAFGADPNGDMTAGESY 899
Query: 427 ITHGVKEGRNPDAFKALEYIASHE 450
+ G +G + F S+
Sbjct: 900 LVFGAADGFDAS-FDLSSLDGSNG 922
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 45/153 (29%), Gaps = 2/153 (1%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
V ID++ + + N TI +S+ SGND V + ++ G+D
Sbjct: 189 STVSETIDISGYAQGDVRTGSGNDTITGSEGSDSIASGSGNDFVYLGAGDDTVIAGEGDD 248
Query: 297 VFDGSSGL-DTFFYYAPSYLYKIYRFENAIIVYDANE-HKQDFLSDVERLRFADQCIDSV 354
+G D F P Y Y I D + + A
Sbjct: 249 RIIAGNGAGDDFIDGGPGNDYVEYPSCTEGITIDLRPIDRSATAFGGTMVGAALMAQGYA 308
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ I + DL+ I + S
Sbjct: 309 ANEPVGISTGSQIGTDLLIGIENAIGGSGDDAI 341
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 69/202 (34%), Gaps = 21/202 (10%)
Query: 225 SGGDDLLDLT----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
SG D LD G Y++L T G+ + IE V G+S +D +
Sbjct: 484 SGKLDALDYASEELGGGAQGVYVNLATGEAVDSYGFSDVILD-----IERVYGTSFDDEL 538
Query: 281 IGNS---ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF---------ENAIIVY 328
IG+ ++ F GND G D FY+ ++ E + IV
Sbjct: 539 IGSDRTDSSEAFDPMGGNDEIHAGGGRDNLFYHLAEGVFGGSSGIEVQLSSSVEGSGIVV 598
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D S +E +R + ++ A + +I G D+ +
Sbjct: 599 SDPFGFTDTFSGIESIRATEFADLFSGGSGYMEIQPLAGSDTIIADPGSDLTVVYRSDAN 658
Query: 389 FGLSEGRDITFDSYLYLGSYDD 410
+G + G + D + + D
Sbjct: 659 YGGTAGVTVRLDLNYAIDGFGD 680
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 63/201 (31%), Gaps = 12/201 (5%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y++ + + G+ DL + SS GY A
Sbjct: 375 DDYEVIYDTSTDDGTFILCEINGNGSNDLRIKSIEGLIFPNAERLLSSYTGYIDRFVNAN 434
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----FYYAPSYLYKIYR 320
+ + V+G+ N+ G+ +N + G + F G +G DT Y S
Sbjct: 435 N---DPVIGTPANEFFHGDDRDNHLIGNDGENYFVGGAGEDTIDGNDLYGDGSGKLDALD 491
Query: 321 FENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + A + + V+ F+D +D V S + + D
Sbjct: 492 YASEELGGGAQGVYVNLATGEAVDSYGFSDVILDIERVYGTSFDDELIGSDRTDSSEAFD 551
Query: 379 VFESMKHFYEFGLSEGRDITF 399
+ G GRD F
Sbjct: 552 PMGGNDEIHAGG---GRDNLF 569
>gi|90581648|ref|ZP_01237438.1| Autotransporter adhesin [Vibrio angustum S14]
gi|90437178|gb|EAS62379.1| Autotransporter adhesin [Vibrio angustum S14]
Length = 3765
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 12/185 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y Q + +D D+ DLT+ + L S I +
Sbjct: 3563 YVFSAGQVKGNGWEVAFD----DIADLTMTANSEQDFSL---SIEPISTLDGQTATGITQ 3615
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
I+ + ++ +IG + ++V F ++ ND G SG D+F + A ++ I+
Sbjct: 3616 TIDVSITDKNDNSLIGTANDDVIFGTANNDSMTGGSGNDSFVFKAEDQGTITNPAQDTIV 3675
Query: 327 VYD--ANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+D AN D + + + AD ID L + ED+ Q I + E
Sbjct: 3676 DFDVTANSDNIDLRAILNSVTDGITADNFIDITENNGSVTLHIKENGEDISQEITLENVE 3735
Query: 382 SMKHF 386
+
Sbjct: 3736 KNALY 3740
>gi|125654624|ref|YP_001033818.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77386284|gb|ABA81713.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 1029
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 5/142 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ G+D T++ +D+ S S G + +
Sbjct: 819 NDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERAGQGVDVVRASVSYTLGAQLETLVLTG 878
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENA 324
T S G+ ++++IGN N +GND G G D A + R
Sbjct: 879 TANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGADLLIGGAGRDSFVFNTRPGPG 938
Query: 325 IIVYDANEHKQDFLSDVERLRF 346
I A+ + D + +E F
Sbjct: 939 AIDRIADFNVADDVIHLENAVF 960
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 54/191 (28%), Gaps = 19/191 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I + GD ++L G ID S S ++ + + + + N ++
Sbjct: 751 IVNHAGDSTIELAGGG-----IDTVQSSLSWTLAANVERLVLTGGAALSGTGNGLAN-LL 804
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------KIYRFENAIIVYDANEHK 334
GN N +GND +G G D + Y I +
Sbjct: 805 TGNGGANRLQGLAGNDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERAGQGVDVVRASVS 864
Query: 335 QDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGL 391
+ +E L + ++L L G D G
Sbjct: 865 YTLGAQLETLVLTGTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGADLLIGGA 924
Query: 392 SEGRD-ITFDS 401
GRD F++
Sbjct: 925 --GRDSFVFNT 933
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 44/148 (29%), Gaps = 15/148 (10%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-------- 296
L + GG ++ + A IE G GND + G N++ +GND
Sbjct: 682 LLDGTLRGSGGNDRLIGTANAERIE---GFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGR 738
Query: 297 -VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSV 354
G +G D + V + ++VERL +
Sbjct: 739 DRMVGGTGNDRYIVNHAGDSTIELAGGGIDTVQSSLSW--TLAANVERLVLTGGAALSGT 796
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFES 382
++L L + G D
Sbjct: 797 GNGLANLLTGNGGANRLQGLAGNDTLNG 824
>gi|27378220|ref|NP_769749.1| Ca binding protein [Bradyrhizobium japonicum USDA 110]
gi|27351367|dbj|BAC48374.1| bll3109 [Bradyrhizobium japonicum USDA 110]
Length = 917
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ IQ + G+D + + G +L G N T+ +
Sbjct: 44 GGPATVANTKLIQA-FGQDGNDTITIDESNGAMPAANL--------FGGAGNDTLTGGSG 94
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + G SGND ++G N++ F +GNDV G G D F A +
Sbjct: 95 GDMLFGQSGNDTLLGKGGNDLLFGGAGNDVLIGGDGNDQMFGEAGND 141
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 23/161 (14%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-------NTESWSS---IGGYE 257
+ T+ + D + ++ G + L N E + I G
Sbjct: 362 GSTGTGDGAADTVTLDGTSAADTIQVSGSGTSISVTGLPAALAITNAEGANDALVIDGLG 421
Query: 258 KNMTI-----AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N TI A V ++ G +GND ++G++ ++ GND G G D A
Sbjct: 422 GNDTISAATLAAGVVHLTIDGGAGNDTIVGSAGDDTLIGGDGNDSVVGGRGNDLVQLGAG 481
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+++ + + + + V+ L+F+ +
Sbjct: 482 RDMFQWNPGDGSDTIEGG--------AGVDTLQFSGANVAE 514
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 24/147 (16%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GGDD + + G + I L + G N TI + ++G GND +
Sbjct: 205 VHAGGGDDTITAS--GNLAALITLT------LDGGAGNDTILGGNGADYLLGGDGNDFID 256
Query: 282 GNSANNVFFESSGNDVF-----------DGSSGLDTFFYYAPSYLYKIYRFEN----AII 326
GN N+ +GND F +G +G DT + + I ++
Sbjct: 257 GNQGNDTAMLGAGNDTFQWDPGDGSDKVEGQAGADTLLFNGSNIGENIVVSAGNDGRTLL 316
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDS 353
D D L+ +E + +
Sbjct: 317 TRDVGNITMD-LNGIETITINARGGSD 342
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 65/177 (36%), Gaps = 6/177 (3%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIE 269
+ + I GG+D + + ++ ++ + + I G + T+ +
Sbjct: 406 TNAEGANDALVIDGLGGNDTISAATLAAGVVHLTIDGGAGNDTIVGSAGDDTLIGGDGND 465
Query: 270 SVVGSSGNDVVIGNSANNVF--FESSGNDVFDGSSGLDTFFYYAPS--YLYKIYRFENAI 325
SVVG GND+V + ++F G+D +G +G+DT + + I +
Sbjct: 466 SVVGGRGNDLVQLGAGRDMFQWNPGDGSDTIEGGAGVDTLQFSGANVAENLIITANGDHA 525
Query: 326 IVYDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ + L VE + A D + V + + T DL G
Sbjct: 526 LLTRDVGNITMDLHGVEHVDIHALGGADHIVVGDLTGTDVTRVNIDLGGSAGTPDGA 582
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 11/142 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTESWSSIGGY 256
G I EV + +I +G D +L G + ++
Sbjct: 157 GEGIDTAEVNGGNGSETFSITANGTRVRFDRVDPAPFSLDIGTTENLVVHAGGGDDTITA 216
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N+ ++ G +GND ++G + + GND DG+ G DT A + +
Sbjct: 217 SGNLAALITLTLD---GGAGNDTILGGNGADYLLGGDGNDFIDGNQGNDTAMLGAGNDTF 273
Query: 317 KIYRFENAIIVYDANEHKQDFL 338
+ + + V + D L
Sbjct: 274 QWDPGDGSDKVE--GQAGADTL 293
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 14/167 (8%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+D + V + G + ++ + T+ + G D + G L
Sbjct: 552 ADHIVVGDLTGTDVTRVNIDLGGSAGTPDGAIDTVTVDATQGADTFGVAGNAGGVTIFGL 611
Query: 246 NTES---------WSSIGGYEKNMTI-----AQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ + ++ G + I A + ++ G GND + G+ +++
Sbjct: 612 HAATNLASMDATDQLTLNGLGGDDVIDASGLAAGVLQLTINGGLGNDTIRGSQGDDLING 671
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
GNDV +G DTF + I + + + +
Sbjct: 672 GDGNDVALMGAGNDTFVWNPGDDNDTIEGQGGTDTLLFNGANIAETI 718
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 46/140 (32%), Gaps = 20/140 (14%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ V S I T + +G ++ + L I +N + + +T +
Sbjct: 1 MAVTANFSAGILTTFGNGQNNTIALGRN--AAGTIVVNGGAV----AIKGGPATVANTKL 54
Query: 269 ESVVGSSGNDVV--------------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G GND + G + N+ SG D+ G SG DT +
Sbjct: 55 IQAFGQDGNDTITIDESNGAMPAANLFGGAGNDTLTGGSGGDMLFGQSGNDTLLGKGGND 114
Query: 315 LYKIYRFENAIIVYDANEHK 334
L + +I D N+
Sbjct: 115 LLFGGAGNDVLIGGDGNDQM 134
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 59/190 (31%), Gaps = 35/190 (18%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G + D+ MS + +D G P
Sbjct: 742 GVETIAFNARGGADTINVGDMSGTDVTEVKIDLG-------------------GVPGTPG 782
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-LNTESWSSIGGYEKNMT 261
G+ + I +GGDD++ L+L ID L ++ + +T
Sbjct: 783 GD--------GAADKIV--INGTGGDDVISLSLNSNGALVIDGLASQIVIENFDFNDTIT 832
Query: 262 I---AQHTVIESVVGSSGNDVVI--GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I VIE+ G +I G + +++ S+GND G G D +
Sbjct: 833 INGLGGDDVIEASGVGPGGPHLIFDGGAGDDLLLGSAGNDTLLGGLGDDVLIGGGGVDVL 892
Query: 317 KIYRFENAII 326
+N +I
Sbjct: 893 DGGPGDNVVI 902
>gi|254474651|ref|ZP_05088037.1| hypothetical protein RR11_486 [Ruegeria sp. R11]
gi|214028894|gb|EEB69729.1| hypothetical protein RR11_486 [Ruegeria sp. R11]
Length = 605
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 40/133 (30%), Gaps = 5/133 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQ 264
++ + G D+L N + + + G N T+
Sbjct: 434 NDTLDGGIGHDKLFGNHGLDVLRGGSGNDTLNAGIGRDKLFGNHGRDILRAGSGNDTLDG 493
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G G DV+ G S N+ G D G +G DTF + A S I F
Sbjct: 494 GVGHDKLFGERGMDVLRGGSGNDTLNGGGGRDRLFGGAGSDTFVFGANSGNDVIRDFVAG 553
Query: 325 IIVYDANEHKQDF 337
F
Sbjct: 554 EDSVHITSGATSF 566
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 57/187 (30%), Gaps = 23/187 (12%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQH 265
Y + ++ I + G D ++ G +LN + + GY N +
Sbjct: 369 YGANISVRNEAGIVRVGTEAG-DTIN-----GGAARDNLNGGLGNDRVEGYSGNDALRGG 422
Query: 266 TVIESVVGSSGNDVV---------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++++VG + ND + GN +V SGND + G D F
Sbjct: 423 RGLDTLVGGAQNDTLDGGIGHDKLFGNHGLDVLRGGSGNDTLNAGIGRDKLFGNHGRD-- 480
Query: 317 KIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I R + D D L ++ LR R L A + +
Sbjct: 481 -ILRAGSGNDTLDGG-VGHDKLFGERGMDVLRGGSGNDTLNGGGGRDRLFGGAGSDTFVF 538
Query: 374 VIGQDVF 380
Sbjct: 539 GANSGND 545
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 57/195 (29%), Gaps = 20/195 (10%)
Query: 216 SPFIQTIYDSGGDDLLDLTL------IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
P +T++ G D TL + I + E+ G E TI +
Sbjct: 343 DPNNETVW---GIKPYDNTLEIAEIPLSFYGANISVRNEAGIVRVGTEAGDTINGGAARD 399
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND V G S N+ G D G + DT F N +
Sbjct: 400 NLNGGLGNDRVEGYSGNDALRGGRGLDTLVGGAQNDTLDGGIGHDKL----FGNHGLDVL 455
Query: 330 ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMK 384
D L ++L L+ ++ L G D S
Sbjct: 456 RGGSGNDTLNAGIGRDKLFGNHGRDILRAGSGNDTLDGGVGHDKLFGERGMDVLRGGSGN 515
Query: 385 HFYEFGLSEGRDITF 399
G GRD F
Sbjct: 516 DTLNGGG--GRDRLF 528
>gi|110680625|ref|YP_683632.1| calcium binding hemolysin protein, putative [Roseobacter
denitrificans OCh 114]
gi|109456741|gb|ABG32946.1| calcium binding hemolysin protein, putative [Roseobacter
denitrificans OCh 114]
Length = 342
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G +N I + E + G +G+D++ G + N+ + +GND+ DG +G D A
Sbjct: 2 DIYGTNRNDVITGTSRGEDIYGRNGDDILRGGAGNDALYGGNGNDILDGGAGNDEMVGGA 61
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++I + +++ + + V +V+ ++L++
Sbjct: 62 GRDTFIFGSGRDSIEYFRSDDTIELNAGLGVRSFSDILSVARTVDGGDSTLLDFGGGNSL 121
Query: 371 LIQVIGQD 378
LI+ + D
Sbjct: 122 LIEDVSID 129
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 10/134 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G ++ D GG+D +D GG N + G +
Sbjct: 163 TGTSGRDVIDGGAGNDDIRGF------GGNDEID----GGGGNDRLFGNNGNDDLDGGDG 212
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N ++ + + G GND + GN+ + +G D+ +G G DT A + +
Sbjct: 213 NDRLSGDNGNDDLDGGRGNDRLFGNNGRDDLSGGAGRDLLNGGRGNDTLEGGAGADTFVF 272
Query: 319 YRFENAIIVYDANE 332
+ I + +
Sbjct: 273 NFGRDVIEDFSTED 286
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 60/175 (34%), Gaps = 10/175 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGGYEKNMTIAQ 264
+ V + T+ D GG + +L+ + DL+ +S +
Sbjct: 99 LSVARTVDGGDSTLLDFGGGN----SLLIEDVSIDDLSAGQFSFGQTAQPPAPAATAPGS 154
Query: 265 HT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T + + G+SG DV+ G + N+ GND DG G D F + +
Sbjct: 155 GTDGNDRLTGTSGRDVIDGGAGNDDIRGFGGNDEIDGGGGNDRLFGNNGNDDLDGGDGND 214
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + N+ D +RL + D R +L + L G D
Sbjct: 215 RLSGDNGNDD-LDGGRGNDRLFGNNGRDDLSGGAGRDLLNGGRGNDTLEGGAGAD 268
Score = 40.9 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 36/109 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + + G +GND ++G + + F SG D + DT A
Sbjct: 30 LRGGAGNDALYGGNGNDILDGGAGNDEMVGGAGRDTFIFGSGRDSIEYFRSDDTIELNAG 89
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + D + L D ID ++ Q S
Sbjct: 90 LGVRSFSDILSVARTVDGGDSTLLDFGGGNSLLIEDVSIDDLSAGQFSF 138
>gi|254501032|ref|ZP_05113183.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222437103|gb|EEE43782.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 732
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 7/162 (4%)
Query: 199 KGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KG G++ + T+ G+D L G + +D S IGG
Sbjct: 422 KGGAGDDTLDGGNDDDVLVGGSGADTMIGGYGNDDLKG---GADNDTMDGGHGDDSLIGG 478
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + + G SGND + G S N+ + G+D F G +G D +
Sbjct: 479 -SGDDIMTGGAGADVLKGGSGNDELSGGSHNDELYGGHGDDTFYGDAGNDMMHGGRGNDT 537
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
F+ + + N+ + ++F D +
Sbjct: 538 VDYSAFDVDLSISLHNKKAHGLEIGTDTIKFIDNIVSGGGDD 579
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 56/190 (29%), Gaps = 15/190 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIA 263
+ ++ GDD L L G N I LN + + + G N +
Sbjct: 319 NDDLSGNNGHDDLHGGSGDDNLRGNSGEDDLYGNSGNDI-LNGGNHNDKLNGNNGNDALY 377
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------LYK 317
+ ++G +G+D++ G + ++ SG D G G D A
Sbjct: 378 GEAGNDEMIGGTGDDMLDGGNGDDSLIGGSGVDNLSGGYGNDELKGGAGDDTLDGGNDDD 437
Query: 318 IYRFENAIIVYDANEHKQDFL--SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + D +D + + + I+ A + L
Sbjct: 438 VLVGGSGADTMIGGYGNDDLKGGADNDTMDGGHGDDSLIGGSGDDIMTGGAGADVLKGGS 497
Query: 376 GQDVFESMKH 385
G D H
Sbjct: 498 GNDELSGGSH 507
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 8/202 (3%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGY 256
+ + +Y + GG+ D +LIGG +L+ + + G
Sbjct: 368 NGNNGNDALYGEAGNDEMIGGTGDDMLDGGN--GDDSLIGGS-GVDNLSGGYGNDELKGG 424
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ T+ + +VG SG D +IG N+ + ND DG G D+ + +
Sbjct: 425 AGDDTLDGGNDDDVLVGGSGADTMIGGYGNDDLKGGADNDTMDGGHGDDSLIGGSGDDIM 484
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYTASYEDL-IQV 374
+ + N+ + E D ++ + +
Sbjct: 485 TGGAGADVLKGGSGNDELSGGSHNDELYGGHGDDTFY--GDAGNDMMHGGRGNDTVDYSA 542
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
D+ S+ + GL G D
Sbjct: 543 FDVDLSISLHNKKAHGLEIGTD 564
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 24/157 (15%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++YG G + Y ++ G+D +D + +DL S S
Sbjct: 510 ELYG---GHGDDTFYGDAGND-------MMHGGRGNDTVDYSAF-----DVDL---SISL 551
Query: 253 IGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I T+ I+++V G+D++ G+ NV +G+D G DT
Sbjct: 552 HNKKAHGLEIGTDTIKFIDNIVSGGGDDILKGSRDANVIEAGAGDDTIRSLQGADTLTGG 611
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
S + ++ + + DFL +++ +
Sbjct: 612 EGSDTFVYRSYD----LSGGTDTITDFLIGTDKIDLS 644
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 10/151 (6%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N I + + + G N ++ + + + G SG+D + GNS + + +SGND+
Sbjct: 299 SDNDILVGGDGSDELHGRSGNDDLSGNNGHDDLHGGSGDDNLRGNSGEDDLYGNSGNDIL 358
Query: 299 DGS---------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G +G D + A + I + ++ + S V+ L
Sbjct: 359 NGGNHNDKLNGNNGNDALYGEAGNDE-MIGGTGDDMLDGGNGDDSLIGGSGVDNLSGGYG 417
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ L+ + L+ G D
Sbjct: 418 NDELKGGAGDDTLDGGNDDDVLVGGSGADTM 448
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
G G+DV+ GN+ N+ + +G+D+ G++G D + L ++ E
Sbjct: 21 GRFGDDVMSGNNGNDEVWGGTGDDILYGNNGNDILYGSGGPDLVEVTGIE 70
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++VG+ +DV+ G ++V ++GND G +G D + + + +Y +V
Sbjct: 8 DTLVGTRHSDVMSGRFGDDVMSGNNGNDEVWGGTGDDILYGNNGNDI--LYGSGGPDLVE 65
Query: 329 DANEHKQD 336
D
Sbjct: 66 VTGIEIVD 73
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ + + V G +G+D++ GN+ N++ + S G D+ + +G++ +
Sbjct: 19 MSGRFGDDVMSGNNGNDEVWGGTGDDILYGNNGNDILYGSGGPDLVE-VTGIEIVDDHPV 77
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
S +++ D + ++DVE L
Sbjct: 78 SVVFEGETAGYRNTFGDYKIQEDGLITDVEIL 109
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G+ +D ++G ++V G+DV G++G D + + +Y I+Y +
Sbjct: 2 IGTDEDDTLVGTRHSDVMSGRFGDDVMSGNNGNDEVWGGTGDDI--LYGNNGNDILYGSG 59
Query: 332 EHKQDFLSDVERL 344
++ +E +
Sbjct: 60 GPDLVEVTGIEIV 72
>gi|304394846|ref|ZP_07376732.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
gi|303293037|gb|EFL87451.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
Length = 1094
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRF 321
T + +GS+G++ + GNS NN GND G +G+D Y
Sbjct: 714 AGTANINAMGSAGSEQLTGNSGNNTLEGGEGNDTMTGGNGMDLINGGGGFDTVDYSQETG 773
Query: 322 ENAIIVYDANEHK------QDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQV 374
+ + D L +ER+ + I + +L A + LI +
Sbjct: 774 TQGVNIDLRTNSGTDTFGSTDTLDSIERVIGSSNNDIIFGSAAGGQVLMGMAGEDQLIGM 833
Query: 375 IGQDVFESMKH 385
G D
Sbjct: 834 GGGDELHGGAD 844
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 26/189 (13%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S+ +E + E V+G + +V+ N+ + GND+ +G +G D
Sbjct: 609 AASNNYRFENFSNFTGGSGREVVIGDNSANVISTGGGNDEIDGNGGNDMINGGTGEDVMR 668
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLS---------DVERLRFADQ-CIDSVNVKQ 358
Y + +++I D ++ +VE L A I+++
Sbjct: 669 GGQGDDGYTVDNISDSVIEEAG--EGYDTVTSFISLTIPVNVESLVLAGTANINAMGSAG 726
Query: 359 RSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDITFDSYLYLGS------YDD 410
L + L G D G FD+ Y D
Sbjct: 727 SEQLTGNSGNNTLEGGEGNDTMTGGNGMDLINGGGG------FDTVDYSQETGTQGVNID 780
Query: 411 LRNVFGSDR 419
LR G+D
Sbjct: 781 LRTNSGTDT 789
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 60/184 (32%), Gaps = 34/184 (18%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN++Y + I+ + GGDD++ ++ + I
Sbjct: 925 GNDVY--SIDNSQDTVIEAV--GGGDDVIYTSVD-----------------YVLLGDQEI 963
Query: 263 AQHTVIESVV---GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ E+ V G N+ +IGN NV G D G G D F + +
Sbjct: 964 ETAILTENAVILRGDDSNNQLIGNDFVNVLEGKGGTDYLLGLGGDDIFQVSKEANATDLD 1023
Query: 320 RF----------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
F + I + A + V + F + N +Q I TA+
Sbjct: 1024 VFGDFEGAGVIGGDRIALSAAEWGMDGIVYQVSQTSFIVATAQNTNQQQFQIANLTAAQT 1083
Query: 370 DLIQ 373
DLI
Sbjct: 1084 DLIA 1087
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 11/102 (10%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+ D++ GNS NN + G D+ G G D + ++Y +
Sbjct: 895 GSASRDIIQGNSGNNYINGAGGIDLMIGGDGNDVYSIDNSQDTVIEAVGGGDDVIYTS-- 952
Query: 333 HKQDFLSDVERLRFADQCI-DSVNVKQRSILEYTASYEDLIQ 373
V+ + DQ I ++ + IL S LI
Sbjct: 953 --------VDYVLLGDQEIETAILTENAVILRGDDSNNQLIG 986
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+SGN+ + G ++ GNDV+ + DT IY + +++
Sbjct: 900 DIIQGNSGNNYINGAGGIDLMIGGDGNDVYSIDNSQDTVIEAVGGGDDVIYTSVDYVLLG 959
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-----ESM 383
D + LR D + ++LE + L+ + G D+F +
Sbjct: 960 DQEIETAILTENAVILRGDDSNNQLIGNDFVNVLEGKGGTDYLLGLGGDDIFQVSKEANA 1019
Query: 384 KHFYEFGLSEG 394
FG EG
Sbjct: 1020 TDLDVFGDFEG 1030
>gi|227885274|ref|ZP_04003079.1| RTX-toxin family pore-forming toxin [Escherichia coli 83972]
gi|227837800|gb|EEJ48266.1| RTX-toxin family pore-forming toxin [Escherichia coli 83972]
gi|307556489|gb|ADN49264.1| C-terminal part of hemolysin HlyA [Escherichia coli ABU 83972]
Length = 865
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 581 FHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDG 640
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 641 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 698
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G ++ + GND G G DT +
Sbjct: 567 TRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQL----YGGDG 622
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
++L+ + D+ N +++L + L G D+ +
Sbjct: 623 NDKLIGGAGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEG 679
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 680 NDLLKGGYGN------DIYRYLSGY 698
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 16/121 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD ++ G + Y D ++ S G + + + ++G
Sbjct: 574 GSKFTDIFHGADGDDHIEG-NDGNDRLYGDKGNDTLS---GGNGDDQLYGGDGNDKLIGG 629
Query: 275 SGNDVVIGNSAN------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GN+ + G + NV GND GS G D + L K
Sbjct: 630 AGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 689
Query: 323 N 323
+
Sbjct: 690 D 690
>gi|119494081|ref|ZP_01624624.1| hypothetical protein L8106_01087 [Lyngbya sp. PCC 8106]
gi|119452183|gb|EAW33386.1| hypothetical protein L8106_01087 [Lyngbya sp. PCC 8106]
Length = 484
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 15/191 (7%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G++ + + + IY +D L +G N + G
Sbjct: 166 TGRGGDDTISGLQADDSLNGNDGNDIIYGGRNNDTL----LGESGNDFLQGNIGDDYLEG 221
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY- 314
N T +++++G +GND++ G+ ++ ND G DT A
Sbjct: 222 GTGNDTFYGGVNVDTLLGGTGNDLLYGDKGDDTLDGGERNDTLFGGEDNDTLTGDAGDDI 281
Query: 315 ------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + ++Y + F D + D+ D ++ S L Y
Sbjct: 282 LIGNAGSDLLDGGADEDVLYGGLDQDSLFGGDGKDFLRGDRQDDFLDGGTASDLLYGGRA 341
Query: 369 ED-LIQVIGQD 378
+D +I G D
Sbjct: 342 DDTVIGGTGND 352
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 11/147 (7%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ I + + + G G+D + G A++ + GND+ G DT + + +
Sbjct: 153 NNLLIGTNNR-DLITGRGGDDTISGLQADDSLNGNDGNDIIYGGRNNDTLLGESGNDFLQ 211
Query: 318 IYRFENAIIVYDANEH-----KQDFLSD--VERLRFADQCIDSVNVKQRS-ILEYTASYE 369
++ + N+ D L L + D+ D+++ +R+ L +
Sbjct: 212 GNIGDDYLEGGTGNDTFYGGVNVDTLLGGTGNDLLYGDKGDDTLDGGERNDTLFGGEDND 271
Query: 370 DLIQVIGQD--VFESMKHFYEFGLSEG 394
L G D + + + G E
Sbjct: 272 TLTGDAGDDILIGNAGSDLLDGGADED 298
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 31/209 (14%), Positives = 61/209 (29%), Gaps = 18/209 (8%)
Query: 200 GSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID------LNTESWSS 252
G GN++ Y + + GG+D LT G I L+ +
Sbjct: 239 GGTGNDLLYGDKGDDTLDGGERNDTLFGGEDNDTLTGDAGDDILIGNAGSDLLDGGADED 298
Query: 253 I-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G ++ + + G +D + G +A+++ + +D G +G D
Sbjct: 299 VLYGGLDQDSLFGGDGKDFLRGDRQDDFLDGGTASDLLYGGRADDTVIGGTGNDYVSGDK 358
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASY 368
+ L E+ I + D L + D+ + + Y
Sbjct: 359 GNDLLIGVDVESDI----PGLIEIDTLYGGDGFDTFVLGDEAQVYYDNQTDDDFSGVDDY 414
Query: 369 E---DLIQVIGQDVFESMKHFYEFGLSEG 394
D + + EG
Sbjct: 415 ALILDFDSTQDIIQLSASGDYLFNESPEG 443
>gi|332347849|gb|AEE60090.1| hemolysin structural protein HlyA [Escherichia coli UMNK88]
Length = 1024
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 9/153 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYE 369
++ A V D L E L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVL-FGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYG 858
Query: 370 DLIQVIGQDVFESMK----HFYEFGL-SEGRDI 397
I + + F + EG D+
Sbjct: 859 HHIIDDDGGKEDKLSLADIDFRDVAFKREGNDL 891
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 15/145 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + GS D+ G +++ + GND G G DT +
Sbjct: 726 TRADKFFGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQL----YGGDG 781
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SM 383
++L+ + D+ N +++L + L G D+ +
Sbjct: 782 NDKLIGGAGNNYLNGGD---GDDELQVQGNSLAKNVLFGGKGNDKLYGSEGADLLDGGEG 838
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 839 NDLLKGGYGN------DIYRYLSGY 857
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 27/158 (17%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDDL++ G + Y D ++ S G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDLIEG-NDGNDRLYGDKGNDTLS---GGNGDDQLYGGDGNDKLIGG 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGN---------DVFDGSSGLDTFFYYAPS 313
+GN+ + G + NV F GN D+ DG G D +
Sbjct: 789 AGNNYLNGGDGDDELQVQGNSLAKNVLFGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGN 848
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+Y+ I+ D + K+D LS + + F D
Sbjct: 849 DIYRYLSGYGHHIIDD-DGGKEDKLSLAD-IDFRDVAF 884
>gi|307149776|ref|YP_003890819.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306986576|gb|ADN18454.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 5944
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 25/211 (11%)
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L G Y+ N+SF +V++ + S + + +
Sbjct: 5661 LNDSGIYSLTVIATDSQGASVNNSFQITVLNLLKGGANNDTLSGTSNDDVLDGGLGGDRL 5720
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSS 252
I G GN++Y ++ + + S G D + ++ N DL ++
Sbjct: 5721 I-----GKAGNDLYIVDSNRD----VVIENASEGQDKIQSSVSYTLPANVEDLILTGTAN 5771
Query: 253 IGGYEK--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I G + TI ++ + G +GND +IG + N+ +GND G G D F +
Sbjct: 5772 INGTGNELDNTITGNSGNNLLKGLAGNDSLIGGNGNDTLVGGAGNDTLTGGEGNDQFLFG 5831
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ + V+ + D ++D
Sbjct: 5832 SGA-------------VFAESAFGVDTITDF 5849
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 52/180 (28%), Gaps = 2/180 (1%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
Y F G L+ + D S ++ +
Sbjct: 5636 TYSTNNLPNWLNFNAATQTFSGTPTLNDSGIYSLTVIATDSQGASVNNSFQITVLNLLKG 5695
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G+S +DV+ G + +GND++ S D A KI +
Sbjct: 5696 GANNDTLSGTSNDDVLDGGLGGDRLIGKAGNDLYIVDSNRDVVIENASEGQDKIQSSVSY 5755
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + +++ + ++L+ A + LI G D
Sbjct: 5756 TLPANVEDLILTGTANING-TGNELDNTITGNSGNNLLKGLAGNDSLIGGNGNDTLVGGA 5814
>gi|150377118|ref|YP_001313714.1| hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
gi|150031665|gb|ABR63781.1| Hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
Length = 574
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 25/197 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-------------DLTLIGGVKNYIDLNTESWSSIG 254
+ S +T + GG D + D IDL+T +
Sbjct: 249 QFSDSMMGSSVDETFFGFGGRDNINGGAGIDTVRYDRDFQRGATKGVSIDLSTGIATDGF 308
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + T IE++ + D ++G+SA N +GND +G G D +
Sbjct: 309 GSRDTL-----TSIENIRATEFKDTIVGSSAANFLRTFAGNDSINGGGGSDNMRGGIGND 363
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-------EYTAS 367
Y + + + + D + + + V+ +L A
Sbjct: 364 TYFVDNTGDIVDEAADSGAGTDTVQSTVSFNLGNTAVAKGGVENLVLLGTGNINGTGNAL 423
Query: 368 YEDLIQVIGQDVFESMK 384
L G + F
Sbjct: 424 NNTLSGNTGNNTFSGFA 440
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 75/213 (35%), Gaps = 22/213 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLI----------GGVKNYIDLNTE 248
G +GN+ Y + DSG G D + T+ GGV+N + L T
Sbjct: 358 GGIGNDTY---FVDNTGDIVDEAADSGAGTDTVQSTVSFNLGNTAVAKGGVENLVLLGTG 414
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + G N T++ +T + G +GND + G N++ GND G +GLDTF
Sbjct: 415 NINGTGNALNN-TLSGNTGNNTFSGFAGNDTIDGGLGNDLINGGLGNDSLTGGAGLDTFN 473
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ N +V D D + +E F + + T
Sbjct: 474 FSNALDATNNVDTINGFVVAD------DTIR-LENAVFTGIVGTGTLTAAQFVTNTTGLA 526
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
D I D + G G + F +
Sbjct: 527 ADADDRIIYDSDTGRLLYDSDGDGAGGSVHFAT 559
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ +++ GS GND + G N+V ++GND+ G G DT+ A + ++
Sbjct: 155 SGNDTINGSLGNDEIWGRLGNDVLNGNAGNDLVTGGGGADTYDGGAGFDILNFQDAYDSP 214
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ V++ F++ + +
Sbjct: 215 TAIRGINLNATAGTVVDQFGFSETFQNFEEFRGTQF 250
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 5/134 (3%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----FYYAP 312
N TI + + G GNDV+ GN+ N++ G D +DG +G D Y +P
Sbjct: 155 SGNDTINGSLGNDEIWGRLGNDVLNGNAGNDLVTGGGGADTYDGGAGFDILNFQDAYDSP 214
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + I A V D + F + E R + +++
Sbjct: 215 TAIRGINLNATAGTVVDQFGFSETF-QNFEEFRGTQFSDSMMGSSVDETFFGFGGRDNIN 273
Query: 373 QVIGQDVFESMKHF 386
G D + F
Sbjct: 274 GGAGIDTVRYDRDF 287
>gi|302038743|ref|YP_003799065.1| hypothetical protein NIDE3454 [Candidatus Nitrospira defluvii]
gi|300606807|emb|CBK43140.1| protein of unknown function, putative Hemolysin-type calcium-binding
protein [Candidatus Nitrospira defluvii]
Length = 2442
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 61/189 (32%), Gaps = 9/189 (4%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG N+ ++ G D L G + D+ ++ +
Sbjct: 1249 LYGDGNNPTVLNLLGGNDTLDGEEGDDQLWGGAGQDQL-FGGEGTDQLVGDVGDDA---L 1304
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + ++ + + G +GNDV+ G N+V G D G +G D A S
Sbjct: 1305 FGDAGDDSLFGDSPL--FAGQAGNDVLDGGDGNDVLDAGGGEDDLHGGAGNDRLIGGAGS 1362
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
Y+ + + D + + + S++ + ED +Q
Sbjct: 1363 DTYRFNLGDGVDSIEDDATQSNRLVFGA---GITAESLSLDVAPNDSLVVRVGNSEDAVQ 1419
Query: 374 VIGQDVFES 382
+ G +
Sbjct: 1420 IAGFGLNSP 1428
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 55/175 (31%), Gaps = 10/175 (5%)
Query: 215 DSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ GDDLL D + G + +D + + G + + ++ +
Sbjct: 1066 GGAGADSLSGGDGDDLLIGDFSEDPGSADILDGGAGAD-ELQGGGGDDILYGGIGMDRLA 1124
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GNDV+ G + ++ +G+D G G D F + E
Sbjct: 1125 GFAGNDVLDGGADSDELQGGAGDDSLWGGLGHDLLTGQEGDD----ELFGDDGNDELHGE 1180
Query: 333 HKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L + L D +L + L G D + +
Sbjct: 1181 TGNDTLLGGVGNDALFGQDDDDFLSGDAGDDVLNGGLGNDQLDGGDGIDDVQGRE 1235
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 9/149 (6%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
A GN + + + T+ G+D D + + +
Sbjct: 2203 ATINGTGN---GLNNILIGNSAVNTLTGGAGNDTYIVGAGDTVVEASNAGTDTVQSAVTW 2259
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+G +N+ + + + G++ +V+ GN+ NN GND G G D
Sbjct: 2260 SLGANVENLALVGSAAV-NGTGNTLANVLTGNAGNNALIGGDGNDTMAGERGNDVLNGGT 2318
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ +++ R + V D + +
Sbjct: 2319 GNDVFQFARGDGQDTVSDTSGSRDRLNFG 2347
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 7/176 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + + G+D + T++ + D+ S G +
Sbjct: 1988 SLNNILAGNGAVNVLTGGAGNDTYVVGAGDTIVEAAGSGTDIIRADISWTLGINVENLVL 2047
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T + G+S + + GNSA N+ +G D G G DT+ S I N
Sbjct: 2048 TGTAAVNGTGNSLANTLTGNSAANILNGGAGADRLIGGQGDDTYVVDNVSDQ--ITESAN 2105
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + ++VE L I+ +IL ++ L G D
Sbjct: 2106 EGLDTVQSSVTYTLAANVENLTLTGSGSINGTGNGLDNILVGNSAANRLTGGAGND 2161
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 13/159 (8%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++++ + + + ++ + G+ ND++ G ++ + +GND+ DG G D
Sbjct: 1873 YNAMLAQTEGVNLVGGEDVDYLYGNVTNDILSGLGGDDSLYGGAGNDLLDGGIGADGMIG 1932
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS---------DVERLRFADQCIDSVNVKQ-R 359
+ + LY + + + + D + +VE L + +
Sbjct: 1933 GSGNDLYTVDEVGDGVT--EQAGQGTDTVQSSVTYALGANVENLTLIGNAAINGSGNSLN 1990
Query: 360 SILEYTASYEDLIQVIGQDV-FESMKHFYEFGLSEGRDI 397
+IL + L G D G DI
Sbjct: 1991 NILAGNGAVNVLTGGAGNDTYVVGAGDTIVEAAGSGTDI 2029
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ +++ G +D + G++ ++V GND DG G+D
Sbjct: 1177 LHGETGNDTLLGGVGNDALFGQDDDDFLSGDAGDDVLNGGLGNDQLDGGDGIDDVQGREG 1236
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
L ++ + N + L + L + + L + L+
Sbjct: 1237 DDLIVGGIGDDFLYGDGNNPTVLNLLGGNDTLDGEEGDDQLWGGAGQDQLFGGEGTDQLV 1296
Query: 373 QVIGQDVF 380
+G D
Sbjct: 1297 GDVGDDAL 1304
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 48/158 (30%), Gaps = 26/158 (16%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------ 322
+ + G GND + G + + GND+ DG SG DT Y +
Sbjct: 593 DHLYGGDGNDHLFGYGGKDYLEGNRGNDILDGGSGADTILGGTGDDTYLVDDSGDIVREY 652
Query: 323 -NAIIVYDANEHKQDFLSDVERLRFADQCIDSV----------NVKQRSILEYTASYEDL 371
N+ + + S +E L +++L + L
Sbjct: 653 ANSGVDEVRSSVTFTLDSQIEYLTLTGSNAIDGIGNELGNILIGNSAKNVLNGGDGQDHL 712
Query: 372 IQVIGQD---VFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ G D E G + FD+Y+Y
Sbjct: 713 VGNEGNDTLIGGAGNSDLLEGG------VGFDTYIYRS 744
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 32/256 (12%)
Query: 191 VQKIYGAPKGSL------GNNIYKIEVQQKDSPFIQT--IYDSGGDDLLDLTLIGGVKNY 242
V +YG + +++Y I + G+DL + +G
Sbjct: 1891 VDYLYGNVTNDILSGLGGDDSLYGGAGNDLLDGGIGADGMIGGSGNDLYTVDEVGDG--- 1947
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV--IGNSANNVFFESSGNDVFDG 300
+ ++ + ++T A +E++ GN + GNS NN+ + +V G
Sbjct: 1948 --VTEQAGQGTDTVQSSVTYALGANVENLTL-IGNAAINGSGNSLNNILAGNGAVNVLTG 2004
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--------- 351
+G DT+ A + + II D + +VE L
Sbjct: 2005 GAGNDTYVVGAGDTIVEAAGSGTDIIRADISW---TLGINVENLVLTGTAAVNGTGNSLA 2061
Query: 352 -DSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLY-LGS 407
+IL A + LI G D V +++ +EG D S Y L +
Sbjct: 2062 NTLTGNSAANILNGGAGADRLIGGQGDDTYVVDNVSDQITESANEGLDTVQSSVTYTLAA 2121
Query: 408 YDDLRNVFGSDRGAAA 423
+ + GS
Sbjct: 2122 NVENLTLTGSGSINGT 2137
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 10/125 (8%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYR 320
+ VGS +D GN +N+ GND DG +G D Y + +Y R
Sbjct: 1735 TFVGSDTDDTFYGNDGDNLIRGLGGNDQIRASLGDDTLDGGAGNDFLEGYVGNDIYLFGR 1794
Query: 321 FENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D + D L +E + D + + ++ + D + + G
Sbjct: 1795 GYGQDSIDDQGDSSDVDTLQLLEGVGPGDLTLRATPDFGTGVILTITNTADQLMLGGFFA 1854
Query: 380 FESMK 384
S++
Sbjct: 1855 SASLR 1859
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 60/196 (30%), Gaps = 15/196 (7%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+Y +++ + P G DD LD GG N + + + G + +
Sbjct: 987 VYDVDLIPQSFPMPAFSSALGADDYLD----GGAGNDLLVGDGGNDILIGGAGDDLLYGE 1042
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G+D + G N+ F +G D G G D +
Sbjct: 1043 SDFTQTI--PGDDWLDGGEGNDRLFGGAGADSLSGGDGDDLLIGDFSEDPGSADILDGGA 1100
Query: 326 IVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQDVF-ESM 383
+ D + + +D +L+ A ++L G D +
Sbjct: 1101 GADELQGGGGD------DILYGGIGMDRLAGFAGNDVLDGGADSDELQGGAGDDSLWGGL 1154
Query: 384 KHFYEFGLSEGRDITF 399
H G EG D F
Sbjct: 1155 GHDLLTGQ-EGDDELF 1169
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ ++G G DV+ G +++ +G+D G +G++ A S L
Sbjct: 1486 GRDGNDVLIGGEGADVLEGEEGDDLLDGGAGSDRLYGGAGVNVLRGGAGSDL 1537
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 8/145 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G+++ + I D G D L + IG Y D N + ++ G
Sbjct: 1205 SGDAGDDVLNGGLGNDQLDGGDGIDDVQGREGDDLIVGGIGDDFLYGDGNNPTVLNLLG- 1263
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY----AP 312
N T+ + + G +G D + G + G+D G +G D+ F A
Sbjct: 1264 -GNDTLDGEEGDDQLWGGAGQDQLFGGEGTDQLVGDVGDDALFGDAGDDSLFGDSPLFAG 1322
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
+ + V DA + D
Sbjct: 1323 QAGNDVLDGGDGNDVLDAGGGEDDL 1347
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GNDV+IG +V G+D+ DG +G D + A + + A
Sbjct: 1484 LHGRDGNDVLIGGEGADVLEGEEGDDLLDGGAGSDRLYGGAGVNVLR----GGAGSDLLV 1539
Query: 331 NEHKQDFLSD 340
+ D L
Sbjct: 1540 SNAVDDQLLG 1549
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 68/230 (29%), Gaps = 14/230 (6%)
Query: 200 GSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
SL N + + GDD + + + + + +
Sbjct: 2058 NSLANTLTGNSAANILNGGAGADRLIGGQGDDTYVVDNVSDQ-----ITESANEGLDTVQ 2112
Query: 258 KNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++T +E++ SG+ GN +N+ +S + G +G DT+
Sbjct: 2113 SSVTYTLAANVENLTLTGSGSINGTGNGLDNILVGNSAANRLTGGAGNDTYVIGTGD--- 2169
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVI 375
I N I + ++VE L I+ +IL ++ L
Sbjct: 2170 SIVESVNGGIDSVQSSVTHTLAANVENLTLTGSATINGTGNGLNNILIGNSAVNTLTGGA 2229
Query: 376 GQDV-FESMKHFYEFGLSEGRDITFDS-YLYLGSYDDLRNVFGSDRGAAA 423
G D + G D + LG+ + + GS
Sbjct: 2230 GNDTYIVGAGDTVVEASNAGTDTVQSAVTWSLGANVENLALVGSAAVNGT 2279
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + + + G G+D++ G + ++ + +G +V G +G D A
Sbjct: 1484 LHGRDGNDVLIGGEGADVLEGEEGDDLLDGGAGSDRLYGGAGVNVLRGGAGSDLLVSNAV 1543
Query: 313 SYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFA 347
++ + +D + V+ + A
Sbjct: 1544 DDQLLGGTGDDIYHLASVLTTVSEDANAGVDTIHLA 1579
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 9/192 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + +GG+D L + G +Y D++ G + N T
Sbjct: 877 SFSDLRDGGAGDDILVGAGGNDYL---VGGSGDDYADVSDGDI--FFGGDGNDIAVTDTE 931
Query: 268 IES---VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
I + SG + G + N+V + G DV G G D + ++
Sbjct: 932 IANYAWTHIGSGTHYIDGGAGNDVLLGALGVDVLLGGEGEDVLRGENRPAGWIAKVYDVD 991
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQDVFESM 383
+I + D + + + + +D L
Sbjct: 992 LIPQSFPMPAFSSALGADDYLDGGAGNDLLVGDGGNDILIGGAGDDLLYGESDFTQTIPG 1051
Query: 384 KHFYEFGLSEGR 395
+ + G R
Sbjct: 1052 DDWLDGGEGNDR 1063
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 14/174 (8%)
Query: 222 IYDSGGDD-----LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ G+D + TL+GGV N ++ G + + ++ + + G G
Sbjct: 1168 LFGDDGNDELHGETGNDTLLGGVGND---------ALFGQDDDDFLSGDAGDDVLNGGLG 1218
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + G + G+D+ G G D + + N + + + +
Sbjct: 1219 NDQLDGGDGIDDVQGREGDDLIVGGIGDDFLYGDGNNPTVLNLLGGNDTLDGEEGDDQLW 1278
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ ++L + V L A + L ++ + G
Sbjct: 1279 GGAGQDQLFGGEGTDQLVGDVGDDALFGDAGDDSLFGDSPLFAGQAGNDVLDGG 1332
Score = 44.7 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ T+ + + + GS D + G N+V G DV +G G D A
Sbjct: 1456 NLSAPVDGGTMIGTSFADHMQGSQAADWLHGRDGNDVLIGGEGADVLEGEEGDDLLDGGA 1515
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
S + A + D L
Sbjct: 1516 GSDRL----YGGAGVNVLRGGAGSDLLVS 1540
Score = 43.6 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 16/188 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQH 265
E +P+ +Y + GDD+L + ++ DL + G N +
Sbjct: 844 GDETLIATNPYSYAMYGNEGDDVLTSQVPSIHDSFSDLRDGGAGDDILVGAGGNDYLVGG 903
Query: 266 TVIESVVGSSGNDVVIGNSANNVF------------FESSGNDVFDGSSGLDTFFYYAPS 313
+ + S G D+ G N++ SG DG +G D
Sbjct: 904 SGDDYADVSDG-DIFFGGDGNDIAVTDTEIANYAWTHIGSGTHYIDGGAGNDVLLGALGV 962
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLI 372
+ E+ + + + DV+ + + S + L+ A + L+
Sbjct: 963 DVLLGGEGEDVLRGENRPAGWIAKVYDVDLIPQSFPMPAFSSALGADDYLDGGAGNDLLV 1022
Query: 373 QVIGQDVF 380
G D+
Sbjct: 1023 GDGGNDIL 1030
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G +G+D + G + NV +G +D G +G D + +
Sbjct: 1509 DLLDGGAGSDRLYGGAGVNVLRGGAGSDLLVSNAVDDQLLGGTGDDIYHLASVLTTVSED 1568
Query: 320 RFENAIIVYDANE-----HKQDFLSDVERL-RFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ A D + +V+ L F + V++ + + L
Sbjct: 1569 ANAGVDTIHLAPSASLVFQAPDQVENVQILDDFYLESTQRVDLVGNVLDNQLSGPNQLDG 1628
Query: 374 VIGQDVFESMKH 385
G D+ +
Sbjct: 1629 QGGNDILIGVGD 1640
>gi|291567836|dbj|BAI90108.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 680
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ + +V G+D+++GN +++ F GND G G DT +
Sbjct: 519 QGNNTLFGGQGNDILVAGEGDDILLGNKDDDILFGGDGNDSIYGGQGNDTLVAGNGN--- 575
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+I + + D L E + + + + SI+ +D++ ++G
Sbjct: 576 QILFGDEGNDILFGGAKGADTLVGGE----GNDTLVMLPGEGYSIVTDFQVNQDMVVLLG 631
Query: 377 QD 378
Sbjct: 632 SP 633
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 12/181 (6%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+T+ GDDLL + TL GG N I + E + G + + + +S+ G
Sbjct: 504 ETLLGFQGDDLLQVSQGNNTLFGGQGNDILVAGEGDDILLGNKDDDILFGGDGNDSIYGG 563
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSS-GLDTFFYYAPSYLYKIYRFENAIIVYD--AN 331
GND ++ + N + F GND+ G + G DT + + E IV D N
Sbjct: 564 QGNDTLVAGNGNQILFGDEGNDILFGGAKGADTLVGGEGNDTLVMLPGEGYSIVTDFQVN 623
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L + N Y A + L+ V+ S++ FG
Sbjct: 624 QDMVVLLGSPDDYEI----GSIPNGFNDGTAIYEAGSDQLVGVLEGVTNVSLEDDNIFGW 679
Query: 392 S 392
+
Sbjct: 680 A 680
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G ++N I E+++G G+D++ + NN F GND+ G D
Sbjct: 488 WFGSDQNDVIIGTASDETLLGFQGDDLLQVSQGNNTLFGGQGNDILVAGEGDDILLG--N 545
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC--IDSVNVKQRSILEYTASYED 370
++ + +Y + + ++ F D+ I K L +
Sbjct: 546 KDDDILFGGDGNDSIYGGQGNDTLVAGNGNQILFGDEGNDILFGGAKGADTLVGGEGNDT 605
Query: 371 LIQVIGQD 378
L+ + G+
Sbjct: 606 LVMLPGEG 613
>gi|209524770|ref|ZP_03273317.1| peptidase domain protein [Arthrospira maxima CS-328]
gi|209494914|gb|EDZ95222.1| peptidase domain protein [Arthrospira maxima CS-328]
Length = 551
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 11/153 (7%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D + + + + + G + + I E+++G G+D + G NN
Sbjct: 333 NDSIQNSNNSITQPFPN-------QWFGSDGDDVIMGSDSDETLLGFEGDDYLDGQQGNN 385
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
F GND G SG D ++ + +Y H + L F
Sbjct: 386 TLFGGQGNDTLVGGSGRDALLG--NKDDDILFGGSSGDTLYGGQGHDTLVAGEGNSLLFG 443
Query: 348 DQCIDSVNVKQRSI--LEYTASYEDLIQVIGQD 378
D+ D + I L + + + G+
Sbjct: 444 DKGNDILYGGSEGIDTLNGGEGNDTFVMLPGEG 476
>gi|238898289|ref|YP_002923970.1| putative RTX-family protein-10 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466048|gb|ACQ67822.1| putative RTX-family protein-10 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 1429
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 15/134 (11%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDS-GGDDL--LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
LGNN FI + +D G+D + T +G ++DL S +
Sbjct: 1220 LGNNT----QDSSRGDFIGSEFDGQDGEDTLVIQGTPVGIEGYFVDLKNGYISYHENWVD 1275
Query: 259 NMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYY 310
+A T IE V+G + ND + GN+ +N G + G G DT +
Sbjct: 1276 IGLVATMTGIEHVIGHATLNDSITGNADDNQLNGQGGESLLYGLGGNDTLTLEQGSAYGG 1335
Query: 311 APSYLYKIYRFENA 324
Y I + +
Sbjct: 1336 EGEDSYIILQNDTG 1349
>gi|126464912|ref|YP_001041888.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides ATCC 17029]
gi|126106727|gb|ABN79252.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides ATCC 17029]
Length = 1029
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 5/142 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ G+D T++ +D+ S S G + +
Sbjct: 819 NDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERAGQGVDVVRASVSYTLGAQLETLVLTG 878
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENA 324
T S G+ ++++IGN N +GND G G D A + R
Sbjct: 879 TANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGADLLIGGAGRDSFVFNTRPGPG 938
Query: 325 IIVYDANEHKQDFLSDVERLRF 346
I A+ + D + +E F
Sbjct: 939 AIDRIADFNVADDVIHLENAVF 960
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 54/191 (28%), Gaps = 19/191 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I + GD ++L G ID S S ++ + + + + N ++
Sbjct: 751 IVNHAGDSTIELAGGG-----IDTVQSSLSWTLAANVERLVLTGGAALSGTGNGLAN-LL 804
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------KIYRFENAIIVYDANEHK 334
GN N +GND +G G D + Y I +
Sbjct: 805 TGNGGANRLQGLAGNDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERAGQGVDVVRASVS 864
Query: 335 QDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGL 391
+ +E L + ++L L G D G
Sbjct: 865 YTLGAQLETLVLTGTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGADLLIGGA 924
Query: 392 SEGRD-ITFDS 401
GRD F++
Sbjct: 925 --GRDSFVFNT 933
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 44/148 (29%), Gaps = 15/148 (10%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-------- 296
L + GG ++ + A IE G GND + G N++ +GND
Sbjct: 682 LLDGTLRGSGGNDRLIGTANAERIE---GFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGR 738
Query: 297 -VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSV 354
G +G D + V + ++VERL +
Sbjct: 739 DRMVGGTGNDRYIVNHAGDSTIELAGGGIDTVQSSLSW--TLAANVERLVLTGGAALSGT 796
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFES 382
++L L + G D
Sbjct: 797 GNGLANLLTGNGGANRLQGLAGNDTLNG 824
>gi|109896827|ref|YP_660082.1| peptidase M12A, astacin [Pseudoalteromonas atlantica T6c]
gi|109699108|gb|ABG39028.1| peptidase M12A, astacin [Pseudoalteromonas atlantica T6c]
Length = 353
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 12/169 (7%)
Query: 10 TERIADHLLR--DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV-V 66
+R + L+R ++ W N+ + + + +L+ N + R A EW + +
Sbjct: 26 IDRNRESLVRYIEKKWVNHTVLHYYFMQNQAQLAG-----QANQLQAVREAFDEWKNLGI 80
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT-ILSHNAL 125
L F E + +F + + +G T AL
Sbjct: 81 GLDFIEVGDSAQAEFRIGFAPGSSWSYVGRDCIDLVPNHEDQTMNFGWDLTTPYGRDTAL 140
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
HEIGHA+G H + V+ + Y N +Y+ + +
Sbjct: 141 HEIGHAMGFPHEHQNHKAGIVWDENAVYAN---FAGSPNYWDDATTYHN 186
>gi|332561385|ref|ZP_08415700.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
gi|332274184|gb|EGJ19501.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
Length = 313
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 56/182 (30%), Gaps = 22/182 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG---------VKNYIDLNTESW 250
G GN+ ++I + +Y G D LDL+ D E +
Sbjct: 82 GQAGNDTFRI----RGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPF 137
Query: 251 SSIGGYEKNMTI--AQHTVI------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ I A+ V+ E++ G GND + G +V G D G +
Sbjct: 138 GPYVVKSIEIVIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGT 197
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D A + ++E ++V A +R FA +
Sbjct: 198 GNDLLLGGAGNDRLD-GQWERDVLVGGAGNDILIGGGGADRFVFAGNFGRDRIRDFSPDM 256
Query: 363 EY 364
Sbjct: 257 AG 258
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + T + ++G +GND + G +V +GND+ G G D F +
Sbjct: 184 LRGMEGADALFGGTGNDLLLGGAGNDRLDGQWERDVLVGGAGNDILIGGGGADRFVFAGN 243
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+I F + + ++
Sbjct: 244 FGRDRIRDFSPDMAGEWIDLRGVGAITGF 272
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 5/104 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+AQ + ++ G+ GND++ G + GND +G G+D + L +
Sbjct: 17 LAQSALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFY 76
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+A + D + + AD + YT
Sbjct: 77 HDACY----GQAGNDTFR-IRGVDLADDVYGGAGTDTLDLSGYT 115
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 51/176 (28%), Gaps = 40/176 (22%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF------------------FESSGND 296
G N + + +VG GND + G + + +GND
Sbjct: 28 GTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDACYGQAGND 87
Query: 297 VF-----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVER 343
F G +G DT + L +R + A YD + +E
Sbjct: 88 TFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEI 147
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + L + L G DV M EG D F
Sbjct: 148 VIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGM---------EGADALF 194
>gi|255692926|ref|ZP_05416601.1| glycosyltransferase [Bacteroides finegoldii DSM 17565]
gi|260621330|gb|EEX44201.1| glycosyltransferase [Bacteroides finegoldii DSM 17565]
Length = 825
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 14/84 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD YL Y ++ V +HY+ G EG+NP F +Y+ ++ D+
Sbjct: 26 FDKKWYLSQYPEIGKV------NPVKHYLKKGWLEGKNPSEKFSTSKYLYAYPDVQYRNM 79
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFV 481
+ +H+ G + GR
Sbjct: 80 NP-------LEHYLFHGKKRGRLC 96
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY 408
N + Y + Y ++ +KH+ + G EG++ + F + YL +Y
Sbjct: 18 YSISNSRLFDKKWYLSQYPEI------GKVNPVKHYLKKGWLEGKNPSEKFSTSKYLYAY 71
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGR 435
D++ HY+ HG K GR
Sbjct: 72 PDVQ----YRNMNPLEHYLFHGKKRGR 94
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFA 541
FD YL Y ++ V +HY+ G EG+NP + F +Y+ ++ D+
Sbjct: 26 FDKKWYLSQYPEIGKV------NPVKHYLKKGWLEGKNPSEKFSTSKYLYAYPDVQYRNM 79
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
+ +H+ G + GR
Sbjct: 80 NP-------LEHYLFHGKKRGR 94
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 15/86 (17%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
N F Y++ + ++ H+ G+ EG++ + F+ YL +Y
Sbjct: 22 NSRLFDKKWYLSQYPEIGKV---------NPVKHYLKKGWLEGKNPSEKFSTSKYLYAYP 72
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ +HY+ HG K GR
Sbjct: 73 DVQYR----NMNPLEHYLFHGKKRGR 94
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 33/196 (16%)
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQR 359
G + A + I +I D ++ + ++ + +
Sbjct: 260 GGNKLDLGAHKEMNYIPTLSAVMIRKDVFQNLDYNTPIPAWIDFWLYRQMLKSELLFYTA 319
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEF------GLSEGR-----------DITFDSY 402
L Y + + D + + + ++ + G R + FDS
Sbjct: 320 DKLTYWRQHNSFNGISNVDKYAAERDWFIYMNDLVNGFKVSRRILKNLKILKKSLLFDST 379
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 461
Y Y L + HY+ G K+G NP A F Y++++ D+ +
Sbjct: 380 YYSEKYAGL-----LNGVDPMIHYLLVGWKKGCNPSASFNNNAYLSNYVDVWLNNVNP-- 432
Query: 462 LVQVGKDHFSNFGCEE 477
H+ +G ++
Sbjct: 433 -----LIHYERYGKKQ 443
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLW 580
F + Y + L+N H+ G+++G S +FN + YL++Y D+W
Sbjct: 375 LFDSTYYSEKYAGLLNGV--------DPMIHYLLVGWKKGCNPSASFNNNAYLSNYVDVW 426
Query: 581 NVFGSDRSAAAQHYITHGMKE 601
+ HY +G K+
Sbjct: 427 ----LNNVNPLIHYERYGKKQ 443
>gi|291566647|dbj|BAI88919.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 303
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 49/137 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N TI ++++G +GND++ GN ++ + +GND G DT + A
Sbjct: 92 SLLGGSNNDTIYGGPGSDTLLGEAGNDLLFGNQGRDLLYGGNGNDTLYGGQEADTLYGEA 151
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
L + + D N+ +D + S + +++ +
Sbjct: 152 GDDLLFGNLANDWLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSFV 211
Query: 372 IQVIGQDVFESMKHFYE 388
+ + V
Sbjct: 212 VSSLSGGVNIPEADVIM 228
>gi|119483379|ref|ZP_01618793.1| hypothetical protein L8106_04981 [Lyngbya sp. PCC 8106]
gi|119458146|gb|EAW39268.1| hypothetical protein L8106_04981 [Lyngbya sp. PCC 8106]
Length = 1551
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 5/143 (3%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
L G + + + +SS N I+ + + G+ D+++G+ ++ +
Sbjct: 1164 LIGDDGNDSLLGGRDDEFSSTRDTNGNDWISGGFGNDFISGNESEDMLMGDEGDDFAYGG 1223
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQC 350
G+D G G DT + N N ++D L + L Q
Sbjct: 1224 QGDDQLFGDQGNDTLCGDRGNDT---IVGSNGSEKAVGNTEEKDVLFGYQDNDLIQGGQG 1280
Query: 351 IDSVNVKQRSILEYTASYEDLIQ 373
D + + + + + DL+
Sbjct: 1281 EDIIYTGKGNDISFAGKDNDLVW 1303
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 59/205 (28%), Gaps = 24/205 (11%)
Query: 204 NNIYKIEVQQKDSPF--IQTIYDSGGDDLL-----DLTLIGGVK-------NYIDLNTES 249
+ IY + ++ GDD L D TL G D+ +
Sbjct: 1282 DIIYTGKGNDISFAGKDNDLVWGDHGDDTLSGDDGDDTLFGDTNDPNATEMQGKDMASGG 1341
Query: 250 WSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ IGG N T+ +++ G +D + G + +++ F GND G+ G D
Sbjct: 1342 SGNDFIGGNRNNDTLMGGEGQDTIRGGKEDDFLYGETGDDLLFGDLGNDKLCGNDGNDIL 1401
Query: 308 FYYAPSYLY----KIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRS 360
F N + N D L E L
Sbjct: 1402 FGDTEDEQAAGGNDTLIGGNGDDILSGN-QAADILCGGEGNDSLHGGKDNDILKGKAGVD 1460
Query: 361 ILEYTASYEDLIQVIGQDVFESMKH 385
L + L +D F H
Sbjct: 1461 WLFGDEGNDTLTGGEDRDYFVFSSH 1485
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 53/153 (34%), Gaps = 3/153 (1%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
++ G+D L + D N W I G N I+ + + ++G G+
Sbjct: 1160 GHDSLIGDDGNDSLLGGRDDEFSSTRDTNGNDW--ISGGFGNDFISGNESEDMLMGDEGD 1217
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D G ++ F GND G G DT S + E +++ ++
Sbjct: 1218 DFAYGGQGDDQLFGDQGNDTLCGDRGNDTIVGSNGSEK-AVGNTEEKDVLFGYQDNDLIQ 1276
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
E + + + D + + L + +D
Sbjct: 1277 GGQGEDIIYTGKGNDISFAGKDNDLVWGDHGDD 1309
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)
Query: 199 KGSLGNNI-YKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G++ Y + + T+ G+D + + NTE + G
Sbjct: 1212 MGDEGDDFAYGGQGDDQLFGDQGNDTLCGDRGNDTIVGSNGSEKAVG---NTEEKDVLFG 1268
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y+ N I + + GND+ N++ + G+D G G DT F
Sbjct: 1269 YQDNDLIQGGQGEDIIYTGKGNDISFAGKDNDLVWGDHGDDTLSGDDGDDTLFGDTNDPN 1328
Query: 316 YKIYRF-----ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + D L E D++ + Y + +D
Sbjct: 1329 ATEMQGKDMASGGSGNDFIGGNRNNDTLMGGE-------GQDTIRGGKEDDFLYGETGDD 1381
Query: 371 L 371
L
Sbjct: 1382 L 1382
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 12/120 (10%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D GG I N + + G + + +S+ G ND++ G + +
Sbjct: 1404 DTEDEQAAGGNDTLIGGNGDDI--LSGNQAADILCGGEGNDSLHGGKDNDILKGKAGVDW 1461
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
F GND G D F + + S + F+ +D + + FAD
Sbjct: 1462 LFGDEGNDTLTGGEDRDYFVFSSHSGTDIVEDFK----------VGEDLIVLDNTITFAD 1511
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 9/136 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L +S G E N + + E+V G+D++ G + G+D G G
Sbjct: 1101 NLVVTMETSTHGSEANDILTGTSNNEAVFSFGGDDIINGLEGQDWLEGEKGDDQIRGDMG 1160
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEH-------KQDFLSDV--ERLRFADQCIDSV 354
D+ + R + D N + DF+S E + D+ D
Sbjct: 1161 HDSLIGDDGNDSLLGGRDDEFSSTRDTNGNDWISGGFGNDFISGNESEDMLMGDEGDDFA 1220
Query: 355 NVKQRSILEYTASYED 370
Q + D
Sbjct: 1221 YGGQGDDQLFGDQGND 1236
>gi|294011760|ref|YP_003545220.1| putative cadherin [Sphingobium japonicum UT26S]
gi|292675090|dbj|BAI96608.1| putative cadherin [Sphingobium japonicum UT26S]
Length = 1431
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 8/110 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N S + I Q +++ G+ GND +IGN ++ + GND DG +G D
Sbjct: 1255 NVSGLSLTAASGGSTLIGQGEE-DTLRGAGGNDTLIGNGGSDTLNGAGGNDNIDGGAGAD 1313
Query: 306 TFFYYAPSYLYK-------IYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
A + + + DF ++R+ +
Sbjct: 1314 RITGGAGADILTGGADADLFIYNATGNSTLAVMDRIMDFQQGIDRIDLSG 1363
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 54/163 (33%), Gaps = 12/163 (7%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L LT G I ++ G N T+ + +++ G+ GND + G + +
Sbjct: 1259 LSLTAASGGSTLI--GQGEEDTLRGAGGNDTLIGNGGSDTLNGAGGNDNIDGGAGADRIT 1316
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYD-ANEHKQDFLSDVERL 344
+G D+ G + D F Y A +I F+ I D + LS +
Sbjct: 1317 GGAGADILTGGADADLFIYNATGNSTLAVMDRIMDFQQGIDRIDLSGIDALSALSGNQAF 1376
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
F I + L ++ D D + F
Sbjct: 1377 SF----IGNAAFSGAGQLHVYSNGTDSFVEANVDNNPATVDFA 1415
>gi|218438228|ref|YP_002376557.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
gi|218170956|gb|ACK69689.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
Length = 1400
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 69/197 (35%), Gaps = 22/197 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWS--------SI 253
++ + + TI G+D + D G K+ I+ N + S +I
Sbjct: 517 GLQSEAQTGDLADTILGGAGNDTISGNLGDDTIDGGDNKDRINGNEGADSLVGGAGTDTI 576
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E N TI + +S+ G +G D + GN ++ GND +G+ D+ F A +
Sbjct: 577 DGGEGNDTINGNEDNDSLFGGAGTDTISGNLGDDTIDGGEGNDTINGNEDNDSLFGGAGT 636
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI--------LEYT 365
++ I + N+ + A S N+ +I +
Sbjct: 637 DTISGNLGDDTIDGGEGNDTINGNEDNDSLFGGAGTDTISGNLGDDTIDGGEGNDTINGN 696
Query: 366 ASYEDLIQVIGQDVFES 382
+ L G D +
Sbjct: 697 EDNDSLFGGAGNDTIDG 713
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 64/199 (32%), Gaps = 11/199 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLD-----LTLIGGVKNYIDL 245
G G+N +I + + TI G+D ++ +L GG
Sbjct: 545 GDDTIDGGDNKDRINGNEGADSLVGGAGTDTIDGGEGNDTINGNEDNDSLFGGAGTDTIS 604
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+I G E N TI + +S+ G +G D + GN ++ GND +G+ D
Sbjct: 605 GNLGDDTIDGGEGNDTINGNEDNDSLFGGAGTDTISGNLGDDTIDGGEGNDTINGNEDND 664
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ F A + + I + D + L + +
Sbjct: 665 SLFGGAGTDTIS-GNLGDDTIDGGEGNDTINGNEDNDSLFGGAGNDTIDGGEGNDTINGN 723
Query: 366 ASYEDLIQVIGQDVFESMK 384
+ L+ G D +
Sbjct: 724 EDNDSLLGGAGNDSIDGGA 742
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 68/202 (33%), Gaps = 14/202 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
G GN+ +T+ G D + + ++ GG E+ S I
Sbjct: 740 GGAGNDTINSNDAANPGEI-ETLIGGAGADNITGGNGNDSIYGGFSTGAQTGDEADS-IN 797
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI + +++ G GND + GN N+ F +GND DG +G DT P+
Sbjct: 798 GGAGNDTIFGNLGNDTIDGGEGNDTINGNEDNDSLFGGAGNDSIDGGAGNDTINSNDPAV 857
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
A + D + + + + + A + +
Sbjct: 858 GGTETLIGGAGADNITGGNGNDSI-------YGGFSTGAQTGDEADSINGGAGNDTIFGN 910
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
+ D + + +EG D
Sbjct: 911 LEDDTIDGGNNNDRISGNEGND 932
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 13/187 (6%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+LG++ + +++ G D + + ID + +I G
Sbjct: 640 SGNLGDDTIDGGEGNDTINGNEDNDSLFGGAGTDTISG---NLGDDTIDGGEGND-TING 695
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N ++ +++ G GND + GN N+ +GND DG +G DT +
Sbjct: 696 NEDNDSLFGGAGNDTIDGGEGNDTINGNEDNDSLLGGAGNDSIDGGAGNDTINSNDAANP 755
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+I + + + + + + A + + +
Sbjct: 756 GEIETLIGGAGADNITGG------NGNDSIYGGFSTGAQTGDEADSINGGAGNDTIFGNL 809
Query: 376 GQDVFES 382
G D +
Sbjct: 810 GNDTIDG 816
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 61/201 (30%), Gaps = 15/201 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + + I G+D + G + + SI G
Sbjct: 846 GNDTINSNDPAVGGTETLIGGAGADNITGGNGNDSIYGGFSTGAQ-----TGDEADSING 900
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI + +++ G + ND + GN N+ +GND G+ G D+ + +
Sbjct: 901 GAGNDTIFGNLEDDTIDGGNNNDRISGNEGNDSLLGGAGNDTIFGNLGNDSIDGGSGTD- 959
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ E + + + + ++ N + + A + L +
Sbjct: 960 -SLIGGEGGDTLNGGDTEGD--------IIYGGFVGNNQNNDEADSINGGAGNDTLYGNL 1010
Query: 376 GQDVFESMKHFYEFGLSEGRD 396
D + EG D
Sbjct: 1011 DNDTIDGGNDEDTIYGGEGTD 1031
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 14/138 (10%)
Query: 201 SLGNNIYK-IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
+ + IY + TI +DLL + +++GG + I E ++
Sbjct: 1144 TGDDTIYGGFSGDTQTGDLADTIDGGTANDLLFGNLGNDSIVGGTGDDIIYGNEDGDTLL 1203
Query: 255 GYEKNMTIAQH--------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G N TI + +++ G ND++ GN N+ +GND G SG DT
Sbjct: 1204 GGNNNDTIYGGFSGDTQAGDLADTIDGGIANDILFGNLGNDSIVGGTGNDTLIGGSGADT 1263
Query: 307 FFYYAPSYLYKIYRFENA 324
+ + ++ ++
Sbjct: 1264 LTGGSNNDHFRYLAASDS 1281
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 12/167 (7%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
I TI G+D + L G ++ + +I G N +I + +++++G +GND
Sbjct: 342 IDTITGGAGNDTIIGGLQSGDQS-----NDEADNINGGVGNDSILGNIGVDTLLGDAGND 396
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL----YKIYRFENAIIVYDANEHK 334
++ G N+ + ND G G DT + +
Sbjct: 397 IIFGGRDNDSIDGGTENDSLIGGEGTDTLVGGNGNDTIIGGLQTADQSGDQGDTITGGDG 456
Query: 335 QDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + S V+ L + ++ + + L+ G D
Sbjct: 457 NDSILGNSGVDTLLGDGGNDALFGGRDNDTIDGGENDDTLVGGEGTD 503
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 71/200 (35%), Gaps = 19/200 (9%)
Query: 197 APKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
+ L + I E + I T+ + G+D + ++ GG+ N + E
Sbjct: 122 SQTSDLADTIDGGEGNDIIFGNLGIDTLVGNIGNDTVFGGRDGDSIDGGLDNDSLVGGEG 181
Query: 250 WSSIGGYEKNMTIAQH--------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+I G N T+ + +++ G GNDV+ GN N+ G+D+ G
Sbjct: 182 ADTITGGTGNDTLVGGLQTSSQTGDLADNLNGGLGNDVIFGNLGNDTLIGDIGDDILFGG 241
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS- 360
DT A + +E ++ +D DS+N +
Sbjct: 242 RDNDTLSGGANNDS---LVGGEGADTITGDEGDDTIRGGLQTASQSDDLADSLNGGLGND 298
Query: 361 ILEYTASYEDLIQVIGQDVF 380
++ + L+ IG D+
Sbjct: 299 LIFGNLGNDTLLGDIGDDIL 318
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 5/106 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + G D + + +I G + N +I ++ ++
Sbjct: 413 NDSLIGGEGTDTLVGGNGNDTI-----IGGLQTADQSGDQGDTITGGDGNDSILGNSGVD 467
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+++G GND + G N+ +D G G DT +
Sbjct: 468 TLLGDGGNDALFGGRDNDTIDGGENDDTLVGGEGTDTLVGGNGADS 513
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 63/190 (33%), Gaps = 10/190 (5%)
Query: 198 PKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G+ + +Y TIY G D L + ++ GG E+
Sbjct: 998 NGGAGNDTLYGNLDNDTIDGGNDEDTIYGGEGTDSLLGRDGNDSIYGGFSGNNQTGDEAD 1057
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S I G N TI+ + +++ G + ND + GN N+ +G D G+SG DT
Sbjct: 1058 S-INGGAGNDTISGNLGDDTIDGDNNNDRISGNEDNDSLLGGAGTDTLFGNSGHDTI--D 1114
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
I ++ + + + D+ ++ + +
Sbjct: 1115 GGEDNDTINGNQDRDKLLGGAGGDSLVGDTGDDTIYGGFSGDTQTGDLADTIDGGTANDL 1174
Query: 371 LIQVIGQDVF 380
L +G D
Sbjct: 1175 LFGNLGNDSI 1184
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 47/173 (27%), Gaps = 6/173 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI---DLNTESWSS-IGGYEKNMTIAQH 265
TI GDD + L ++ LN + I G N T+
Sbjct: 253 NDSLVGGEGADTITGDEGDDTIRGGLQTASQSDDLADSLNGGLGNDLIFGNLGNDTLLGD 312
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G ND + G + + D G +G DT S +N
Sbjct: 313 IGDDILFGGIDNDSIDGGADQDSLVGGENIDTITGGAGNDTIIGGLQSGDQSNDEADN-- 370
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
I V+ L + ++ + LI G D
Sbjct: 371 INGGVGNDSILGNIGVDTLLGDAGNDIIFGGRDNDSIDGGTENDSLIGGEGTD 423
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 10/126 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH--------TVIESVVGSSGN 277
GG D + TL GG N + E +I G E + TI + +S+ G GN
Sbjct: 240 GGRD--NDTLSGGANNDSLVGGEGADTITGDEGDDTIRGGLQTASQSDDLADSLNGGLGN 297
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D++ GN N+ G+D+ G D+ A + I N+
Sbjct: 298 DLIFGNLGNDTLLGDIGDDILFGGIDNDSIDGGADQDSLVGGENIDTITGGAGNDTIIGG 357
Query: 338 LSDVER 343
L ++
Sbjct: 358 LQSGDQ 363
Score = 37.4 bits (85), Expect = 7.3, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 33/116 (28%), Gaps = 39/116 (33%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ + IY G DL
Sbjct: 1205 GNNNDTIYG--------------------------GFSGDTQAGDLAD------------ 1226
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
TI + + G+ GND ++G + N+ SG D G S D F Y A S
Sbjct: 1227 -TIDGGIANDILFGNLGNDSIVGGTGNDTLIGGSGADTLTGGSNNDHFRYLAASDS 1281
>gi|254421648|ref|ZP_05035366.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196189137|gb|EDX84101.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 357
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 38/116 (32%), Gaps = 4/116 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ +GG+D L GG + G N + +
Sbjct: 198 NDLLNGDGGNDRLFGNGGNDKL----FGGNGRDKLDGGGGDDLLNGGIGNDKLFGKGGND 253
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++G G D + G N++ GND G G D F A L I F +
Sbjct: 254 NLIGGRGRDFLNGGVGNDLLDGGVGNDHLFGGGGADRFVLRAGDGLDTITAFRVGV 309
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 1/142 (0%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I ++ S I G + + + I+ + G G D ++G + N++ GND G+
Sbjct: 155 IKVSESPLSPINGTNADDKLLGSSRIDIINGFLGKDQLVGKAGNDLLNGDGGNDRLFGNG 214
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D F ++ + N+ + + + + V +L
Sbjct: 215 GNDKLFGGNGRDKLDGGGGDDLLNGGIGNDKLFGKGGNDNLIGGRGRDFLNGGVGN-DLL 273
Query: 363 EYTASYEDLIQVIGQDVFESMK 384
+ + L G D F
Sbjct: 274 DGGVGNDHLFGGGGADRFVLRA 295
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G N+ G D +G G D + ++ A
Sbjct: 242 GNDKLFGKGGNDNLIGGRGRDFLNGGVGNDLLDGGVGND--HLFGGGGADRFVLRAGDGL 299
Query: 336 DFLSDVER 343
D ++
Sbjct: 300 DTITAFRV 307
>gi|110289556|gb|ABG66249.1| Matrixin family protein, expressed [Oryza sativa Japonica Group]
Length = 906
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 77/231 (33%), Gaps = 56/231 (24%)
Query: 19 RDQYWSNY---FIRYKPDVLTTHRLSFDITELNPNAQEVA--RWALGEWSKVVDLTFEET 73
R +W+ +P VLT D P +A R A W++V+ ++F E
Sbjct: 47 RYAFWTGKPRWTRHGRPMVLTYAVSHTDAVGYLPGDAVLAVFRSAFARWAEVIPVSFAEI 106
Query: 74 SIHSD-------IKFISSNNGYVCTPR--------YDSRYFME---INFDKADVWRYGIG 115
+ D I+ G Y E I+FD A+ W +
Sbjct: 107 TTEDDAAAAEADIRVGFYGAGEHGDGHPFDGPLNVYAHATGPEDGRIDFDAAERWAVDLA 166
Query: 116 KGT-----ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQ 169
L A HEIGHALGL H + +SVM Y +
Sbjct: 167 ADASPAAVDLETVATHEIGHALGLDHS-------------------TSESSVMYPYVGTR 207
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
+ + + V D+ +Q++YG + +K + S F +
Sbjct: 208 ERKVRLT--------VDDVEGIQELYGVNPSFSFLDYFKPDHDTPRSRFWR 250
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 55/173 (31%), Gaps = 56/173 (32%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIKFIS---SNNG-----------------YV 89
+E R AL W++V L F E + + +DI+ + +G
Sbjct: 705 REAFRSALARWAEVTPLRFAEAARYEEADIRVGFYLHTADGKCDACGCVCKGGGEEALAH 764
Query: 90 CTPRYDSRYFM-----EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
P D R + + A L A+HEIGHALGL H
Sbjct: 765 AHPPQDGRIHLHAARKWAVTNVAGAGGDAPPLAVDLESVAVHEIGHALGLGH-------- 816
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S S M Y + + D+ VQ++YGA
Sbjct: 817 ------------SSSESSMMYR---------HYRGKVSLTDDDVKGVQELYGA 848
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 53/177 (29%), Gaps = 56/177 (31%)
Query: 52 QEVARWALGEWSKVVDLTFEETS--IHSDIK--FISSNNG-------------------- 87
+ R A W+ V+ + F E +DIK F +G
Sbjct: 338 RAALRSAFARWADVIPMRFLEAERYDAADIKVGFYLYTDGRCDGCACIDSDDDDDDGDDC 397
Query: 88 -YVCTPRYDSRYFMEINFDKADVWRYGIGKGT-----ILSHNALHEIGHALGLMHPGSYN 141
V +I+ A W + T L A HEIGH LGL H
Sbjct: 398 EGVLAHSSMPEKSGQIHLHAAHRWTVNLAADTAPLAVDLESVAAHEIGHVLGLDHS---- 453
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S +S+M F+ + D+ +Q++YGA
Sbjct: 454 ---------------SSRSSMMYPFI-------SCRERKVRLTTDDVHGIQELYGAN 488
>gi|91228644|ref|ZP_01262560.1| putative RTX toxin [Vibrio alginolyticus 12G01]
gi|91187795|gb|EAS74111.1| putative RTX toxin [Vibrio alginolyticus 12G01]
Length = 3397
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 84/245 (34%), Gaps = 50/245 (20%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG--NNIYKIEVQQKDSPFIQTI 222
Y+ +S A Y +S I A+ G + +L + +E + +TI
Sbjct: 3105 YYDEGNSSTQAQHMYQVLAALSSIEAIGLGSGVDEHTLKQYDTDGVVESDIDVTKLAETI 3164
Query: 223 YDSG-----GDDLLDLTLIGGVKNYIDL--------NTESWSSIGGYEK-----NMTIAQ 264
G D + GG N I L N + S+I + +++
Sbjct: 3165 LGQDVPLKQGSDTI----QGGEGNDILLGDLIEFGGNEQGLSAIQSHVAQQTGQDVSTVD 3220
Query: 265 HTVI--------------------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
I +++ G +G+D++ G+ N++ G+D+ G G
Sbjct: 3221 GEDIHEYVRNNLEEFNQTHQGDKSDNLYGGAGDDLLFGHGGNDILVGGEGDDILIGGLGS 3280
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT + ++K N + + DF + + L F+D D + +L
Sbjct: 3281 DTLTGSEGADIFKWSEVTNDV------DTVTDFNKNEDALDFSDLFDDLSKDEIGELLND 3334
Query: 365 TASYE 369
S +
Sbjct: 3335 LQSGD 3339
>gi|85704124|ref|ZP_01035227.1| hypothetical protein ROS217_14036 [Roseovarius sp. 217]
gi|85671444|gb|EAQ26302.1| hypothetical protein ROS217_14036 [Roseovarius sp. 217]
Length = 783
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ +L ++ + ++ GDD ++ V D N S+ G
Sbjct: 501 GSDFTTLSDD----GALALEGAGNDSVVGGAGDDTIEGGAGDDVLAASDGND----SVLG 552
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I +++ G +G+DV+ +++ GNDV G +G DT A +
Sbjct: 553 GDGNDRIGGGLGNDTIDGGTGDDVIGAGQGDDIAAGGDGNDVVSGGAGSDTLGGGADNDS 612
Query: 316 YK 317
Sbjct: 613 IS 614
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 8/152 (5%)
Query: 200 GSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
G G+++ + + G D L + ++ G N +
Sbjct: 570 GGTGDDVIGAGQGDDIAAGGDGNDVVSGGAGSDTLGGGADNDSISGSFGNDSIDGGDGDD 629
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IGG TI + V G+D + G ++ +D+ DG +G DT A
Sbjct: 630 LIGGGTGQDTILGGAGNDQVGAGEGDDDLFGGDGDDFLAGGGRDDLIDGGAGNDTINGGA 689
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + + D ++D E
Sbjct: 690 GNDVMTGGDGVELFVFNEFVAGDVDVITDFEV 721
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 3/136 (2%)
Query: 252 SIGGYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G E +A + + ++ + G+D + + E +GND G +G DT
Sbjct: 475 NLRGLEVGENVAANAEVRWSALFSNGGSDFTTLSDDGALALEGAGNDSVVGGAGDDTIEG 534
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A + ++++ D N+ L + + + + I +
Sbjct: 535 GAGDDVLAASDGNDSVLGGDGNDRIGGGLGN-DTIDGGTGDDVIGAGQGDDIAAGGDGND 593
Query: 370 DLIQVIGQDVFESMKH 385
+ G D
Sbjct: 594 VVSGGAGSDTLGGGAD 609
>gi|304413288|ref|ZP_07394761.1| Matrixin domain-containing hypothetical protein [Candidatus
Regiella insecticola LSR1]
gi|304284131|gb|EFL92524.1| Matrixin domain-containing hypothetical protein [Candidatus
Regiella insecticola LSR1]
Length = 557
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 56/176 (31%), Gaps = 42/176 (23%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF--EETSIHSDIKFISSNNGYVCTPR 93
+T +E+ + L E ++ L F E +D+ F G +P
Sbjct: 80 NKQPSVSGLTTFTALQREINQSVLNEIAEKTGLEFRQVEGDEPADLVF-----GNFHSPT 134
Query: 94 YDSRYFMEINFDKA----DVWRYGIGKGTI----LSHNALHEIGHALGLMHPGSYNGGYP 145
F++ ++W K +HEIGHALGL H S+N P
Sbjct: 135 ISLVGFVDSTTTVPSKRDEIWVNTKLKARRNPERFKATLVHEIGHALGLDH--SFNLEDP 192
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++MSY V+D +A+ ++G
Sbjct: 193 C--------------TIMSY-----------SWSSTGLQVADFLALWTLHGRDSHP 223
>gi|227358213|ref|ZP_03842554.1| RTX-family protein [Proteus mirabilis ATCC 29906]
gi|227161549|gb|EEI46586.1| RTX-family protein [Proteus mirabilis ATCC 29906]
Length = 2776
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 86/280 (30%), Gaps = 64/280 (22%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVA----VQKIYGAPKGS------LGNNIYKIEVQQK 214
YF P S + Y T DI+A Q I+ G+ ++ + + +
Sbjct: 1975 YFEP--SWRENELFYFNTYNGDDIIAAPLITQNIFDVHNGTKRLSGGEKDDTFNV-FTSE 2031
Query: 215 DSPFIQTIYDSGGDDLLDLTLI---------GGVKNYIDLNTESWSSIG----------- 254
+ Y G+D L + KNYI S
Sbjct: 2032 SPRYASRFYGREGNDTLRIIQTEKKYIGYEVNLSKNYIKFIGGENKSNSQSFHARLFIFQ 2091
Query: 255 -----------------GYEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGND 296
+K IA IE+VVGS GND++ G+ NN G D
Sbjct: 2092 EQGQIYTHKLADTMPNITLQKQPVIAYLESIENVVGSEIGNDIIYGDQKNNYLNGMGGVD 2151
Query: 297 VFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G +G DT A + Y I R N D N + + + D E +
Sbjct: 2152 SLYGLAGDDTLVLREGYAQGGAGNDSYTILRASN----TDNNVKQLETIIDEETHT--EA 2205
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ +N I + D++ + + F E
Sbjct: 2206 SLIQLNYTFDEITAISRRETDIVFTLKVSNDKDPDQFIEH 2245
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---------YYAPSYLYKIYRF 321
+ G G+D ++ N +++ GND +G SG D F + + +Y + +
Sbjct: 2603 IDGGKGDDHIVVNEGHHILIAGEGNDNLNGGSGHDLFISTSGNDYLGGGSGNNVYVVQKR 2662
Query: 322 ENAIIVYDANEHKQDFLSD 340
+ VYD E F+S
Sbjct: 2663 HGEVTVYDEGEMSHIFVSG 2681
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S S I G + + I + ++ GND + G S +++F +SGND G SG + +
Sbjct: 2599 SSSVIDGGKGDDHIVVNEGHHILIAGEGNDNLNGGSGHDLFISTSGNDYLGGGSGNNVYV 2658
Query: 309 YYAPSYLYKIYRFENAIIVYDAN 331
+Y ++ +
Sbjct: 2659 VQKRHGEVTVYDEGEMSHIFVSG 2681
>gi|163742733|ref|ZP_02150118.1| hypothetical protein RG210_15350 [Phaeobacter gallaeciensis 2.10]
gi|161383988|gb|EDQ08372.1| hypothetical protein RG210_15350 [Phaeobacter gallaeciensis 2.10]
Length = 498
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 20/163 (12%)
Query: 198 PKGSLGNNIYKIEVQQKD----SPFIQTIYDSGGDDLLDL-----TLIGGVKNYI----- 243
G+N + D ++ + G+D L TL GG + I
Sbjct: 284 NDTLRGDNDVGPDDNADDLLIGGSGHDSLDGNAGNDTLKAGNGADTLHGGEGDDILNGGR 343
Query: 244 --DLNTE--SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
DL T ++ G N T+ + + G +G+DV+ G++ N++ G+D
Sbjct: 344 GRDLITGDDGRDTLAGGRANDTLTGGAGNDRLSGGAGHDVMRGDAGNDLLIGGRGHDTLF 403
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
GS G D + ++ + A +D ++D +
Sbjct: 404 GSDGADRLIGQSGHDRLTGGSGGDSFVF--ARGSGRDTITDFQ 444
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 14/153 (9%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTI 262
+ + D + G D LD G L + + + G E + +
Sbjct: 285 DTLRGDNDVGPDDNADDLLIGGSGHDSLD-----GNAGNDTLKAGNGADTLHGGEGDDIL 339
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-- 320
+ + G G D + G AN+ +GND G +G D A + L R
Sbjct: 340 NGGRGRDLITGDDGRDTLAGGRANDTLTGGAGNDRLSGGAGHDVMRGDAGNDLLIGGRGH 399
Query: 321 ---FENAIIVYDANEHKQDFL---SDVERLRFA 347
F + + D L S + FA
Sbjct: 400 DTLFGSDGADRLIGQSGHDRLTGGSGGDSFVFA 432
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 60/186 (32%), Gaps = 16/186 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ GDD L +L L + + + ++ + ++G SG+D + GN+
Sbjct: 263 NAGDDNLRGSLGNDT-----LIGGAGNDTLRGDNDVG-PDDNADDLLIGGSGHDSLDGNA 316
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLS 339
N+ +G D G G D L + + AN+ D LS
Sbjct: 317 GNDTLKAGNGADTLHGGEGDDILNGGRGRDLITGDDGRDTLAGGRANDTLTGGAGNDRLS 376
Query: 340 DV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEG 394
+ +R + + L + + LI G D + F G
Sbjct: 377 GGAGHDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSGGDSFVFARGSG 436
Query: 395 RDITFD 400
RD D
Sbjct: 437 RDTITD 442
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 11/144 (7%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ ++ +I S + + + N+ +G+D G +G D + Y
Sbjct: 101 VALSGDDIITSAWNGG--ERINAFAGNDTIRAGNGDDTIFGGAGQDELVLGDGVHTYSF- 157
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCI-----DSVNVKQRSILEYTASYEDLIQV 374
F+++ +D L DVE +R A+Q + + + S + D+I
Sbjct: 158 AFDDSAGALLTTTKGRDMLFDVETVRLANQTLHIQEGSATDEALHSTNVDDTTRSDMIHG 217
Query: 375 IGQD---VFESMKHFYEFGLSEGR 395
G D + K F G E R
Sbjct: 218 RGGDDTITGGAGKDFLLGGAGEDR 241
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 54/182 (29%), Gaps = 46/182 (25%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD--------------LTLIGGVKNYIDLNTESWSS-IG 254
K T++ GDD+L+ TL GG N L + + +
Sbjct: 318 NDTLKAGNGADTLHGGEGDDILNGGRGRDLITGDDGRDTLAGGRAND-TLTGGAGNDRLS 376
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + ++G G+D + G+ + SG+D G SG D+F + S
Sbjct: 377 GGAGHDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSGGDSFVFARGSG 436
Query: 315 LYKIYRFENAIIVYDANEHKQ------------------------------DFLSDVERL 344
I F+ + D L + +
Sbjct: 437 RDTITDFQLGEDLIQITRGADRIDHLGFAQLGADVRITFANVSILVEDVTVDQLMNTDNF 496
Query: 345 RF 346
F
Sbjct: 497 LF 498
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 69/233 (29%), Gaps = 33/233 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--- 252
G + LG+ ++ DS G D L D+ + + + S +
Sbjct: 142 GQDELVLGDGVHTYSFAFDDSAGALLTTTKGRDMLFDVETVRLANQTLHIQEGSATDEAL 201
Query: 253 -------------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN---------SANNVFF 290
I G + TI + ++G +G D + G ++
Sbjct: 202 HSTNVDDTTRSDMIHGRGGDDTITGGAGKDFLLGGAGEDRLSGGKNDDFLDGGLDDDHLS 261
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKI------YRFENAIIVYDANEHKQDFLSDVERL 344
++G+D GS G DT A + + + +++ + D + + L
Sbjct: 262 GNAGDDNLRGSLGNDTLIGGAGNDTLRGDNDVGPDDNADDLLIGGSGHDSLDGNAGNDTL 321
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHFYEFGLSEGR 395
+ + + IL + + G+D G R
Sbjct: 322 KAGNGADTLHGGEGDDILNGGRGRDLITGDDGRDTLAGGRANDTLTGGAGNDR 374
>gi|126724418|ref|ZP_01740261.1| hypothetical protein RB2150_11321 [Rhodobacterales bacterium
HTCC2150]
gi|126705582|gb|EBA04672.1| hypothetical protein RB2150_11321 [Rhodobacterales bacterium
HTCC2150]
Length = 11732
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 58/174 (33%), Gaps = 18/174 (10%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S T++ G D++ G + D G I + + G
Sbjct: 5960 GSSGADTLHGGAGKDIIYGDEAGSLYGTAD--------SGQLGDGDMIYGGAGDDLIYGQ 6011
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-- 332
G+DV+ G+ ++ + GND + SG D + K N ++ D +
Sbjct: 6012 YGDDVIFGDDGADIIYGQDGNDQLNAGSGRDELYGGEGRDRLKGVSGVNLLVGGDDQDAV 6071
Query: 333 ---HKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + D++ + D +++ + AS + + + G D
Sbjct: 6072 LGGSGSDTIRWVVGDDIDTVDGGGGNSDVLDLYAAEFIGGAASKDSIEILSGAD 6125
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 54/192 (28%), Gaps = 33/192 (17%)
Query: 215 DSPFIQTIYDSGGDDLL----------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
D I S G+D + + G N I GG + +
Sbjct: 5883 DDVVRVVIDGSDGNDEIIIADTFTRKATIRGGAGRDNLISYADAEIYFDGGAGNDKLVQY 5942
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ G G+D +IG+S + +G D+ G + + +
Sbjct: 5943 GDSAVTFFGGDGDDELIGSSGADTLHGGAGKDIIYGDE------AGSLYGTADSGQLGDG 5996
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++Y + + + F D D I+ + L G+D
Sbjct: 5997 DMIYGGAGDDLIYGQYGDDVIFGDDGAD--------IIYGQDGNDQLNAGSGRDELYG-- 6046
Query: 385 HFYEFGLSEGRD 396
EGRD
Sbjct: 6047 -------GEGRD 6051
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 64/224 (28%), Gaps = 23/224 (10%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTESWSSIGGY 256
+ I I V +S + I D G+ D G ++ + + T +
Sbjct: 6205 DYITSIAVSADESTYKTHIEDGNGNRTFLQSITLRDTARGTGEEDTVRIETGAGDDTVDL 6264
Query: 257 EKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ ++ S+ G+D IG+ + + G+D D G+D
Sbjct: 6265 SGQQILQGGAGGLVRSIDLGDGDDYFIGSKQDEIISLGDGDDTVDAGLGIDVIIDSGGRD 6324
Query: 315 LY--------------KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y K + + + ++L D+E L+ + D +
Sbjct: 6325 TYVYDAKEQGGDNNAVKFTVDGQQVRIEQGGTTQVEYLWDMEVLKLSGTAQDDTFDMTGT 6384
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
D + F S+ DS +Y
Sbjct: 6385 TQRLEIDGRDGSDAYLARSTAGVTRFGVEDFSDNIVTLSDSAIY 6428
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 66/219 (30%), Gaps = 36/219 (16%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLIGGVKNY------- 242
A G +Y + K +Y GDD+ + NY
Sbjct: 9786 ANGFDRGVTVYTGDGDDKSVQIKSIRKEAPTRVYLGKGDDIASVLPSLNGDNYGLQFLAD 9845
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIES--VVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
LN + G + N I + + G G+D +IG++ ++ +GND +G
Sbjct: 9846 PSLNPHDKLEVFGNDGNDRIDLSKALVNVHAYGGDGDDRLIGSTGFDILIGGAGNDWIEG 9905
Query: 301 ---------------SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++ L+++ ++ Y + DV
Sbjct: 9906 YGAELINDPNNHSLWGQQVEVLIGDFIGRLFEVEVSNGNLVRYQLPGYI-----DVNSQA 9960
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
F D+ ++ V + + DL + D +
Sbjct: 9961 FDDRWMERGGVYLFDRTDDAGQFMDLNLALDGDGILKAE 9999
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 10/150 (6%)
Query: 228 DDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS----SGNDVVIG 282
+D + G ID G + N +A + V G+D + G
Sbjct: 11369 NDTIATGRTTNGEVAEIDGRHAILGDAGYIDANSALAGAMELTRVESYMPAIFGDDTISG 11428
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ ++ +G+D G +G D + Y + F++A ++ +A + +
Sbjct: 11429 GAGRDIVIGGAGSDDVHGEAGRD-----FVAGDYLLMDFDDAGLIREAITQRDLYFMGEG 11483
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLI 372
L D V + A+ D+I
Sbjct: 11484 DLVTTGYDGDFVFGGTQFNTMGVAASVDVI 11513
Score = 40.5 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 53/188 (28%), Gaps = 49/188 (26%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
I+G+ +++ + + + GG D ++ + I++
Sbjct: 8950 IHGSNAA----DVFSFDNTSALTYT----FGHGGKDAFNI------GSIIEVRQAPNPDG 8995
Query: 254 GGYEKNMTIAQHTVIES-VVGSSGNDVV--IGNSANNVFFESSGNDV------------- 297
G + T ++ + G GND N F +G+D
Sbjct: 8996 EGTVSVVETTAGTSTDTRLFGGGGNDYFQVYRNKGETWLFGDAGDDTFFVKATLGITNLG 9055
Query: 298 -----------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF--L 338
DG SG DTF + F + V D +
Sbjct: 9056 SGKGKNKVGYNRNAPLHIDGGSGFDTFILEGTEIGDQFIVFVDDDGVQQIKGAGVDLGSI 9115
Query: 339 SDVERLRF 346
+VE ++
Sbjct: 9116 QNVENIQI 9123
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 9/142 (6%)
Query: 198 PKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+LGN + + E+ + S +D ++ + G YI S
Sbjct: 10708 NVLTLGNASTFDYELAPEFSTDGAVPVLVTVNDRVNDPINGKRYLYIANLPTDVSDWAAV 10767
Query: 257 EKNMTI----AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + T T IE+V G GND + + V G DV + G D A
Sbjct: 10768 DFSDTTLWKEVSATDIENVAG--GNDTIHMSYGRIVALGGGGADVLT-ALGSDNS-GNAN 10823
Query: 313 SYLYKIYRFENAIIVYDANEHK 334
S I+ ++A +V ++ K
Sbjct: 10824 SRDTAIFAGDSAQVVLTPDDEK 10845
>gi|152995878|ref|YP_001340713.1| hemolysin-type calcium-binding region [Marinomonas sp. MWYL1]
gi|150836802|gb|ABR70778.1| Hemolysin-type calcium-binding region [Marinomonas sp. MWYL1]
Length = 5171
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 66/200 (33%), Gaps = 25/200 (12%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD-----------LLDLTLIGGVKNYIDLN 246
LG + Y D+ T D+ ++ DL G V +
Sbjct: 4818 NYQVLGGDAYPTSFTATDANEPDTSEDATSNNWSSEDELNAAHTDDLNQYGKVDGTQNNL 4877
Query: 247 TESW----SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
S ++I G N TI + + V G+ GND++ G S N+ + GND G S
Sbjct: 4878 DTSDLWKPNAIEGNNDNNTIFSGSDNDVVHGNGGNDLISGESGNDTLYGGDGNDHILGGS 4937
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D + A + N + N ++L+ + + +L
Sbjct: 4938 QDDILYGEAGDDWLQSDSGSNKMYGGSGN----------DKLQGGGNEDELYGEEGNDLL 4987
Query: 363 EYTASYEDLIQVIGQDVFES 382
AS + L G D +
Sbjct: 4988 YGNASNDKLFGGSGNDYLDG 5007
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 9/166 (5%)
Query: 204 NNIYKIEVQQKDSPFI--QTIYDSGGDDLL-----DLTLIGGVKN-YIDLNTESWSSIGG 255
N +Y K +Y G+DLL + L GG N Y+D GG
Sbjct: 4958 NKMYGGSGNDKLQGGGNEDELYGEEGNDLLYGNASNDKLFGGSGNDYLDGGENDDLLDGG 5017
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++ Q +++ G +GND + G + ++ GND G +G D+ +
Sbjct: 5018 DGDDVLYGQG-GADNLSGGAGNDYLSGGAGSDTLSGGVGNDYLSGGAGQDSLTGGEGADT 5076
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ I E+A+ D L + L D D +
Sbjct: 5077 FVIDFAESAVDSLTDFNSATDVLDISDLLDVPDGTDDISTYLNEHL 5122
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 80/249 (32%), Gaps = 41/249 (16%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--------LNTESWSS-IGGYEK 258
T+Y G+D + +GG ++ I L ++S S+ + G
Sbjct: 4910 GGNDLISGESGNDTLYGGDGNDHI----LGGSQDDILYGEAGDDWLQSDSGSNKMYGGSG 4965
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS----------------- 301
N + + + G GND++ GN++N+ F SGND DG
Sbjct: 4966 NDKLQGGGNEDELYGEEGNDLLYGNASNDKLFGGSGNDYLDGGENDDLLDGGDGDDVLYG 5025
Query: 302 -SGLDTFFYYAPSYLYKIYRFENAII-----VYDANEHKQDFLSDVERLRFADQCIDSVN 355
G D A + + + Y + QD L+ E AD +
Sbjct: 5026 QGGADNLSGGAGNDYLSGGAGSDTLSGGVGNDYLSGGAGQDSLTGGE---GADTFVIDFA 5082
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL--GSYDDLRN 413
L S D++ + L+E IT S + +Y
Sbjct: 5083 ESAVDSLTDFNSATDVLDISDLLDVPDGTDDISTYLNEHLSITSSSVGVVENENYTKTVA 5142
Query: 414 VFGSDRGAA 422
FG+D A
Sbjct: 5143 TFGNDSAVA 5151
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 35/225 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA GN V +I+ G+D + LT SS+
Sbjct: 2760 GASTFITGNG--NDSVTLSGQMRASSIFTGSGNDSVSLTGQMQA-----------SSVYT 2806
Query: 256 YEKNMTIAQHTVIE--SVVGSSGNDVVIGNS--ANNVFFESSGNDVF----------DGS 301
N + ++ S+ S GND+V+ N + GND+ +G
Sbjct: 2807 GSGNDVVVVDGPMQASSIYTSHGNDIVVVNGRMGASSIHTGPGNDIIALNDLGWSTVNGG 2866
Query: 302 SGLDTFFYYAPSYLYK-----IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
SG D + + YK NA + + N D ++ + + + +
Sbjct: 2867 SGTDILYLGKSADHYKFESIVFGSDFNANGLGNMNGVLVDKVTGEKLFFYNIEGFGYGDG 2926
Query: 357 KQRSILEYTASYE---DLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + SYE D+ + G+ EG ++
Sbjct: 2927 TGVGLTDTVTSYEYNVDISAAVLNADGSEALTITITGVPEGATLS 2971
>gi|159046410|ref|YP_001542081.1| hemolysin-type calcium-binding region [Dinoroseobacter shibae DFL 12]
gi|157914169|gb|ABV95600.1| hemolysin-type calcium-binding repeat protein [Dinoroseobacter shibae
DFL 12]
Length = 1895
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 6/186 (3%)
Query: 219 IQTIYDSGGDDLLDLTL----IGGVKNYIDLNT-ESWSSIGGYEKNMTIAQHTVIESVVG 273
I++I+ S DD + + + G D+N + I G N TI + + G
Sbjct: 1546 IESIFASHHDDTIQGSTARDQVNGGDGDDDINARGGFDLIDGGAGNDTINGGVGSDVLNG 1605
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND +I + +G+D+ G++G D A + + + + D ++
Sbjct: 1606 DGGNDTIIAGDGFDEVDGGAGDDLLKGNAGNDFIAGGAGADRIEGGIGRDMLHGGDDDDD 1665
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
E A + N + +E A + + IG D E SE
Sbjct: 1666 ISGAEGFDEIFGDAGDDLLRGNAGNDT-IEGGAGDDRIEGGIGADTLRGGVGNDEIVASE 1724
Query: 394 GRDITF 399
G D F
Sbjct: 1725 GFDALF 1730
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 9/179 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ S ++ GDD L + L GG + ++ G + + +
Sbjct: 1717 NDEIVASEGFDALFGEDGDDTLLGNAGNDLLEGGAGMDALFGGQGADTLRGGDGDDILRG 1776
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T ++++G G+D + G + +GND+ G SG D F +
Sbjct: 1777 ETGADTLIGGVGDDELRGGQGGDRLSGGAGNDILVGGSGADVFVFEGGVDTITDMSLIVD 1836
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I D + L+ + L I+ A+ DL V E +
Sbjct: 1837 RIEIDGDALGIAGLTGAQVL----DQFAEAIGPSTQIVFDAANRIDLQGVTNLTQLEGL 1891
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 51/175 (29%), Gaps = 17/175 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQH 265
++ + D G G+D + N S + G N TI
Sbjct: 1570 GDGDDDINARGGFDLIDGGAGNDTI--------------NGGVGSDVLNGDGGNDTIIAG 1615
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ V G +G+D++ GN+ N+ +G D +G G D
Sbjct: 1616 DGFDEVDGGAGDDLLKGNAGNDFIAGGAGADRIEGGIGRDMLHGGDDDDDIS-GAEGFDE 1674
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I DA + + + + L ++++ G D
Sbjct: 1675 IFGDAGDDLLRGNAGNDTIEGGAGDDRIEGGIGADTLRGGVGNDEIVASEGFDAL 1729
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 214 KDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + TI GDD ++ TL GGV N + +E + ++ G + + T+ +
Sbjct: 1685 RGNAGNDTIEGGAGDDRIEGGIGADTLRGGVGNDEIVASEGFDALFGEDGDDTLLGNAGN 1744
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G D + G + G+D+ G +G DT + + + +
Sbjct: 1745 DLLEGGAGMDALFGGQGADTLRGGDGDDILRGETGADTLIGGVGDDELRGGQGGDRLSGG 1804
Query: 329 DANE 332
N+
Sbjct: 1805 AGND 1808
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 40/124 (32%), Gaps = 2/124 (1%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + + + G +G+D + G + ++ G+D +G G D I
Sbjct: 904 NDLLFGGEGNDGLYGDAGDDELYGEAGDDTLEGGDGDDYLNGGGGNDVINGGDGDDFIDI 963
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D E + D+ D + + + + D + + +
Sbjct: 964 --GGSGVATVDGGEGWDTYFVDLTGFNPGDFIYELNLITGYAGVFGNPFNSDFVADVEEI 1021
Query: 379 VFES 382
+ E
Sbjct: 1022 LVEG 1025
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 52/193 (26%), Gaps = 21/193 (10%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + I + G + D ID S S ++ A +
Sbjct: 1206 YDTDEAYGGAGGIIATFADGAGTVEDSWGNLDTFTDIDEIVGSQSD------DVMEATGS 1259
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---- 322
G G+D++IG A++V G+D G D S
Sbjct: 1260 TGVRFDGEDGDDLLIGTDADDVLRGGDGDDEIHAGLGTDEIDGGEGSDTLVTDVTGLGPD 1319
Query: 323 ----------NAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDL 371
+ + D L E D + +I+ +D+
Sbjct: 1320 QITVDLDPLAGSQTIAGEGPGAADTLVGTENFTLTGDWDATVIGSDAANIITTGGGADDI 1379
Query: 372 IQVIGQDVFESMK 384
+G+D +
Sbjct: 1380 TTGLGRDTVNAGA 1392
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 54/162 (33%), Gaps = 6/162 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG-- 282
GG +L + G I + ++ + T + GS +DV+ G
Sbjct: 1432 GGGINLAYFDVSGVSGLTITVGVNGSGTVVSGTAGLVNDSFTFADVFGGSQDDDVITGTD 1491
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ F GNDV DG G D +Y S +I ++ D D L ++E
Sbjct: 1492 RAEYEGFQGYGGNDVIDGRGGFDEVYYLNASGAVQINLQNGSVTGAD----GTDTLLNIE 1547
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + R + +D+ G D+ +
Sbjct: 1548 SIFASHHDDTIQGSTARDQVNGGDGDDDINARGGFDLIDGGA 1589
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 14/161 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY---------APSYLYKI 318
IE V G+ D+ +G+ +N+F G+D+F G +G D + +Y
Sbjct: 565 IEFVGGTRFQDIFVGDETDNIFHGEGGDDIFIGGAGNDFIDGGPGETEDDEDFDTLIYAN 624
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E I D D + + D+ I +++ + + + + G+D
Sbjct: 625 ETGEAGIFADMGTGLIVDTFGDTDTVVSIDRVIGTMDEDVF-VGSDFQDFIQYVGLAGED 683
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
VF + + E D G Y DL F D
Sbjct: 684 VFFAGAAYETLRYREDDDF----GALHGVYVDLAANFAIDG 720
Score = 45.1 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 11/155 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D G D + + V ++ + G + + + + + G +GND ++
Sbjct: 728 ITDDGEIDRVRGSDFNDVLATSNVGAR----LEGEDGDDFLKGRLGEDRLEGDAGNDTIL 783
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR------FENAIIVYDANEHKQ 335
+ ++ + G D +G +G D FF E +
Sbjct: 784 AGAGDDQLSDGRGFDYLNGGAGWDLFFRDIGQDFEDFSWTPVVDLTEGKFFDPSEDPALF 843
Query: 336 DFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYE 369
D L ++E + + + + LE A +
Sbjct: 844 DILENIEAVSLEGNFNMTLIGDDGDNFLESDAGND 878
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 3/104 (2%)
Query: 222 IYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-VVGSSGND 278
I G D L D+T +G + +DL+ + S E E+ + +
Sbjct: 1300 IDGGEGSDTLVTDVTGLGPDQITVDLDPLAGSQTIAGEGPGAADTLVGTENFTLTGDWDA 1359
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
VIG+ A N+ G D G DT A + +
Sbjct: 1360 TVIGSDAANIITTGGGADDITTGLGRDTVNAGAGDDVIDASAGD 1403
Score = 40.5 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 4/100 (4%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G ++ I + + G + N +A V + G G+D + G + +GND
Sbjct: 722 GDEDTIITDDGEIDRVRGSDFNDVLATSNVGARLEGEDGDDFLKGRLGEDRLEGDAGNDT 781
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+G D Y A + QDF
Sbjct: 782 ILAGAGDDQLSDGRGFD----YLNGGAGWDLFFRDIGQDF 817
>gi|52346000|ref|NP_001005043.1| matrix metallopeptidase 7 (matrilysin, uterine) [Xenopus (Silurana)
tropicalis]
gi|50369210|gb|AAH76908.1| MGC89057 protein [Xenopus (Silurana) tropicalis]
gi|224472824|gb|ACN49121.1| matrix metallopeptidase 7 [Xenopus (Silurana) tropicalis]
Length = 259
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 58/189 (30%), Gaps = 49/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI-- 79
W+ + Y T + A G WS V L F + S +DI
Sbjct: 102 WTKTRLTYSIVNYTPDLSR-------QVVDTAIQRAFGVWSNVTPLQFTKVSSGDADILI 154
Query: 80 KFISSNNG---------YVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHEI 128
+F + +G V Y + + +FD+ + W G L A HE
Sbjct: 155 RFGARTHGDSSPFDGPSGVLAHAYGPGRGIGGDAHFDEDERWT-SSRTGFNLFLVAAHEF 213
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y Q + D
Sbjct: 214 GHSLGLDHSTDPRALMFPTYH----------------YVDTQAFRLSQ----------DD 247
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 248 INGIQSIYG 256
>gi|297182567|gb|ADI18727.1| lipopolysaccharide biosynthesis protein [uncultured Rhizobiales
bacterium HF4000_32B18]
Length = 887
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 48/158 (30%), Gaps = 24/158 (15%)
Query: 381 ESMKHFYEFGL--SEGR-----DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ + EF GR D FD Y G D+ D A ARHY G +
Sbjct: 8 DLTALWREFAALDRHGRLARRPDFRFDPDFYGGRNPDI--AGEKDPAARARHYADVGAAK 65
Query: 434 GRNPDAFK-----------ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR-FV 481
GR+P + A+ ++ L A G +
Sbjct: 66 GRHPTLYHETRAEAQGVDRAVAFLVREPRLKAAVEAKVPGAAELAFELMALGDPVDKAVA 125
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
F + Y DL A HY+ G +EGR
Sbjct: 126 DFSVHHYRTVSSDLPAA---SDIALFLHYMKAGYREGR 160
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 47/148 (31%), Gaps = 20/148 (13%)
Query: 472 NFGCEEGR-FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
G R FD Y G D+ D A ARHY G +GR+P +
Sbjct: 21 RHGRLARRPDFRFDPDFYGGRNPDI--AGEKDPAARARHYADVGAAKGRHPTLYHETRAE 78
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEG-------------RSITFNPDLYLTSYD 577
A D AF ++A + G E F+ Y T
Sbjct: 79 AQGVDRAVAFLVREPRLKAAVE-AKVPGAAELAFELMALGDPVDKAVADFSVHHYRTVSS 137
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRAL 605
DL A HY+ G +EGR +
Sbjct: 138 DLPAA---SDIALFLHYMKAGYREGRPV 162
Score = 41.3 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 541 ADAPDLVQAGKDHFS--NFGYEEGRS-ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
A +PDL ++ + G R F+PD Y D+ D +A A+HY
Sbjct: 4 AASPDLTALWREFAALDRHGRLARRPDFRFDPDFYGGRNPDI--AGEKDPAARARHYADV 61
Query: 598 GMKEGRALGI 607
G +GR +
Sbjct: 62 GAAKGRHPTL 71
>gi|281351325|gb|EFB26909.1| hypothetical protein PANDA_021651 [Ailuropoda melanoleuca]
Length = 505
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 63/202 (31%), Gaps = 50/202 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEET- 73
+ L W + ++ + L + + AL W L F+E
Sbjct: 77 YALSGSMWRKRTLTWRVRSFPQS------SALTRETVRTLMHHALATWGIESGLRFQELV 130
Query: 74 ---SIHSDIKFISSNNGYVCTPRYDSRYF--------------MEINFDKADVWRYGI-- 114
DI + + + +D + + +FD + W YG
Sbjct: 131 SQEPAEPDILIDFARAYHQDSYPFDGQGGTLAHAFFPGEHPISGDTHFDDEETWTYGSKD 190
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G+GT L A+HE GHALGL H + N S+M F
Sbjct: 191 GEGTDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQGPVGDP 231
Query: 175 ASFGYCATPMVSDIVAVQKIYG 196
+ D +Q++YG
Sbjct: 232 DKYRLSQ----DDREGLQQLYG 249
>gi|254513404|ref|ZP_05125469.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11]
gi|221532408|gb|EEE35404.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11]
Length = 2116
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 2/108 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + I + + G +D + G + + GND+ DG G D
Sbjct: 1978 GNDGDDFIFGGRGRDVIKGGGDDDSLFGGRGRDTIYGGDGNDLIDGGRGRDKLDGGEGDD 2037
Query: 315 LYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
++ + Y N+ +VE+ FA D + V++
Sbjct: 2038 VFVNVDGGDVFHFYGDFGNDEVYGDSVEVEQFIFAKVNSDDIAVEEVD 2085
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 9/110 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +G+D+++G ++ + G+D G G D R + I
Sbjct: 1956 DTLEGDAGDDIILGLKGRDLLIGNDGDDFIFGGRGRDVIKGGGDDDSLFGGRGRDTIYGG 2015
Query: 329 DANE-----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
D N+ +D L E D +V+ +++
Sbjct: 2016 DGNDLIDGGRGRDKLDGGE----GDDVFVNVDGGDVFHFYGDFGNDEVYG 2061
>gi|149910991|ref|ZP_01899621.1| calcium binding hemolysin protein, putative [Moritella sp. PE36]
gi|149805974|gb|EDM65959.1| calcium binding hemolysin protein, putative [Moritella sp. PE36]
Length = 1615
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 33/183 (18%)
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+T DI +Y S+G+NI + I+ GGDD+LD
Sbjct: 1304 STFAPQDI----PLY----VSIGDNIIQGGEFAEVIATGEGNDIIHAEGGDDILD----- 1350
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G N I + + + G GND V S ++V G+D+
Sbjct: 1351 -----------------GGTGNDEINAGSGNDVIDGGEGNDEVNAGSGDDVIDGGLGDDL 1393
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G G D+ L + N I+ + + D ++ N
Sbjct: 1394 LHGDDGNDSLQGGEGDDLLTVSGRGNNILDGGVGDDTLKVNRSADYYYQRDVARNATNTL 1453
Query: 358 QRS 360
Q
Sbjct: 1454 QGG 1456
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 56/183 (30%), Gaps = 33/183 (18%)
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+T DI +Y S+G+NI + I+ GGDD+LD
Sbjct: 800 STFAPQDI----PLY----VSIGDNIIQGGEFAEVIATGEGNDIIHAEGGDDILD----- 846
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G N I + + + G GND V S ++V G+D+
Sbjct: 847 -----------------GGTGNDEINAGSGNDVIDGGEGNDEVNAGSGDDVIDGGLGDDL 889
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G G D+ L + N + + + D ++ N
Sbjct: 890 LHGDDGNDSLQGGEGDDLLTVSGRGNNTLDGGVGDDTLKVNRSADYYYQRDVARNATNTL 949
Query: 358 QRS 360
Q
Sbjct: 950 QGG 952
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 56/183 (30%), Gaps = 33/183 (18%)
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+T DI +Y S+G+NI + I+ GGDD+LD
Sbjct: 1052 STFAPQDI----PLY----VSIGDNIIQGGEFAEVIATGEGNDIIHAEGGDDILD----- 1098
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G N I + + + G GND V S ++V G+D+
Sbjct: 1099 -----------------GGTGNDEINAGSGNDVIDGGEGNDEVNAGSGDDVIDGGLGDDL 1141
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G G D+ L + N + + + D ++ N
Sbjct: 1142 LHGDDGNDSLQGGEGDDLLTVSGRGNNTLDGGVGDDTLKVNRSADYYYQRDVARNATNTL 1201
Query: 358 QRS 360
Q
Sbjct: 1202 QGG 1204
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFY 309
S I N ++ + ++G G+D++ G+ N+ G+D+ G +T
Sbjct: 609 SFILASSGNDNLSGSNAADLILGLGGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNTLDG 668
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
K+ R + D + + L
Sbjct: 669 GVGDDTLKVNRSADYYYQRDVARNATNTLQG 699
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 33/90 (36%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++ SSGND + G++A ++ G+D+ G G D+ L + N +
Sbjct: 611 ILASSGNDNLSGSNAADLILGLGGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNTLDGGV 670
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + D ++ N Q
Sbjct: 671 GDDTLKVNRSADYYYQRDVARNATNTLQGG 700
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 5/123 (4%)
Query: 269 ESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++++ G +V+ N++ G+D+ DG +G D + + + N +
Sbjct: 815 DNIIQGGEFAEVIATGEGNDIIHAEGGDDILDGGTGNDEINAGSGNDVID-GGEGNDEVN 873
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-TASYEDLIQVIGQD--VFESMK 384
+ + D + L D + +L L +G D
Sbjct: 874 AGSGDDVIDGGLGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNTLDGGVGDDTLKVNRSA 933
Query: 385 HFY 387
+Y
Sbjct: 934 DYY 936
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 5/123 (4%)
Query: 269 ESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++++ G +V+ N++ G+D+ DG +G D + + + N +
Sbjct: 1067 DNIIQGGEFAEVIATGEGNDIIHAEGGDDILDGGTGNDEINAGSGNDVID-GGEGNDEVN 1125
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-TASYEDLIQVIGQD--VFESMK 384
+ + D + L D + +L L +G D
Sbjct: 1126 AGSGDDVIDGGLGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNTLDGGVGDDTLKVNRSA 1185
Query: 385 HFY 387
+Y
Sbjct: 1186 DYY 1188
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 17/134 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN- 283
GDD++D G + + + + S GG ++ ++ G G+D + N
Sbjct: 875 GSGDDVIDG---GLGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNTLDGGVGDDTLKVNR 931
Query: 284 ------------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+A N GND +GS+G +T+ + I F+ +
Sbjct: 932 SADYYYQRDVARNATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDAINDFD-HNARSSSG 990
Query: 332 EHKQDFLSDVERLR 345
K D + + +
Sbjct: 991 WGKVDRIVLGDGIT 1004
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 17/134 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN- 283
GDD++D G + + + + S GG ++ ++ G G+D + N
Sbjct: 1127 GSGDDVIDG---GLGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNTLDGGVGDDTLKVNR 1183
Query: 284 ------------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+A N GND +GS+G +T+ + I F+ +
Sbjct: 1184 SADYYYQRDVARNATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDAINDFD-HNARSSSG 1242
Query: 332 EHKQDFLSDVERLR 345
K D + + +
Sbjct: 1243 WGKVDRIVLGDGIT 1256
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 42/150 (28%), Gaps = 36/150 (24%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ I S G+D L + DL I G + +
Sbjct: 597 GLDDHSVLDAVQSFILASSGNDNLSGSNAA------DL-------ILGLGGDDLLHGDDG 643
Query: 268 IESVVGSSGNDVVI-GNSANNVFFESSGNDVF----------------------DGSSGL 304
+S+ G G+D++ NN G+D G G
Sbjct: 644 NDSLQGGEGDDLLTVSGRGNNTLDGGVGDDTLKVNRSADYYYQRDVARNATNTLQGGKGN 703
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
D A + Y+ R + + D + +
Sbjct: 704 DRLEGSAGAETYRFNRGDGQDAINDFDHNA 733
>gi|326316853|ref|YP_004234525.1| putative rtx family calcium-binding cytotoxins and bacteriocins
protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373689|gb|ADX45958.1| putative rtx family calcium-binding cytotoxins and bacteriocins
protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 1173
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 9/111 (8%)
Query: 234 TLIGGVKNYI---DLNTESWSS------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G +N I D S+SS + G E N +A + + + G +G+D + G +
Sbjct: 551 ATTGSDRNDIYLGDNGANSFSSGAGDDWLRGLEGNDHLAAGSGNDVLEGGAGDDSLQGQA 610
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
N+ G DV G G D A + + ++ Y +
Sbjct: 611 GNDRLLGGEGADVLQGGDGDDVLEGGAGNDILAGGVYDTWNGNYSGAGNDT 661
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI + +++ G GND + G N++ +GND G +G D
Sbjct: 756 LTGTAGNDTIIGYATADTINGDDGNDTLEGRGGNDLLEGGAGNDSLYGQAGNDRLLGGDG 815
Query: 313 SYLYKIYRFENAIIVYDANE 332
+ + + ++ + N+
Sbjct: 816 ADVLQGGDGDDVLDGGAGND 835
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 30/167 (17%)
Query: 179 YCATPMVSDIVAVQ-KIYGAPKGSLGNNIY-KIEVQQKDSPFIQTIYDSG--GDDLLDLT 234
P+ S++ A++ + A GS N+IY S + G G+D
Sbjct: 532 PADAPLRSELPALRVFMATATTGSDRNDIYLGDNGANSFSSGAGDDWLRGLEGND----- 586
Query: 235 LIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
L S + + G + ++ + ++G G DV+ G ++V +
Sbjct: 587 ---------HLAAGSGNDVLEGGAGDDSLQGQAGNDRLLGGEGADVLQGGDGDDVLEGGA 637
Query: 294 GNDVFDGS-----------SGLDTFFYYAPSYLYKIYRFENAIIVYD 329
GND+ G +G DT+ + I + + D
Sbjct: 638 GNDILAGGVYDTWNGNYSGAGNDTYLFGRGDGQDIIIDDDATVGNLD 684
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L ++ G ++N S +G+D + G N+ SGNDV +G +G
Sbjct: 544 LRVFMATATTGSDRNDIYLGDNGANSFSSGAGDDWLRGLEGNDHLAAGSGNDVLEGGAGD 603
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
D+ A + ++ E A ++ D L
Sbjct: 604 DSLQGQAGND--RLLGGEGADVLQGG--DGDDVLEG 635
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 29/118 (24%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF------------- 298
++ G + N T+ + + G +GND + G + N+ G DV
Sbjct: 968 TLQGLDGNDTLEGRGGNDLLEGGAGNDSLYGQAGNDRLLGGDGADVLQGGDGDDVLDGGA 1027
Query: 299 ----------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G DT+ + S +I ++ D +D
Sbjct: 1028 GNDILAGGVYDTWNGSFRGAGNDTYLFGRGSQADRIVDEDSTPGNVDVLSVGPGVATD 1085
>gi|238785204|ref|ZP_04629196.1| RTX toxin and Ca2+-binding protein [Yersinia bercovieri ATCC 43970]
gi|238713882|gb|EEQ05902.1| RTX toxin and Ca2+-binding protein [Yersinia bercovieri ATCC 43970]
Length = 1487
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 9/126 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWS---------SIGGYEKNMTIAQHTVIESVVGSSGN 277
G+D++ + + +DL S +I G + I ++G G+
Sbjct: 1336 GEDIILPEGYRLLNSTLDLMAGDDSISDLSCIGHNIDGGLGDDIIYAKGGDNRLIGGEGS 1395
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + S N+ G D+ SG+D +Y I + D +
Sbjct: 1396 DQLFSGSGNDYLVGGDGQDILSAGSGIDKMEGGEGDDIYVIELGVGKTTIRDNHGKNSVI 1455
Query: 338 LSDVER 343
L D++
Sbjct: 1456 LKDIDH 1461
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 51/155 (32%), Gaps = 22/155 (14%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDS-GGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ Y + + +I D GG D + + G I+L I
Sbjct: 893 DTFYLMGDVEASVHRPASILDGQGGSDTIIAMGVRFSADGYE---INLAKGFVKYINDKL 949
Query: 258 KNMTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFF------ 308
+ TI IE+ G + +D +IG+ N G+ D +G G D
Sbjct: 950 RLATIYN---IENAYGQADTSDKLIGDDNINYLNGGGGDGYDRLEGLGGNDILVLQQGVA 1006
Query: 309 -YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S Y I ++I + D +S V+
Sbjct: 1007 IGGKGSDNYIISPPVTSVIDVVIMDDGLDEVSTVQ 1041
>gi|56681784|gb|AAW21428.1| leukotoxin A [Pasteurellaceae bacterium I17]
Length = 390
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + TI + + + G G+D++ G + ++ GND+ G G D F +
Sbjct: 234 FNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQG 293
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
I E + ++ + +D
Sbjct: 294 DGNDSITESEGNDKLSFSDSNLKDL 318
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 225 FKGSKFDDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 284
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 285 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 321
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ ++ F G D DG+ G D F I N
Sbjct: 213 VEEIIGTSHNDIFKGSKFDDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 269
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 270 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 314
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 15/197 (7%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
++ +G K +G Y + K ++ I + +D+ + N D
Sbjct: 190 KIEYRHGNNKQHVG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFDDAFNGGD----G 239
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTF 307
+I G + N + + + G +G+D + G N++ G+D+F G D+
Sbjct: 240 VDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSI 299
Query: 308 FYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + N H + E++ Q ++I Y A
Sbjct: 300 TESEGNDKLSFSDSNLKDLTFEKVNHHLVITNTKQEKVTI--QNWFREAEFAKTIHNYVA 357
Query: 367 SYEDLIQVIGQDVFESM 383
+ +D I+ I E +
Sbjct: 358 TRDDKIEEIIGQNGERI 374
>gi|115345688|ref|YP_771869.1| rhizobiocin [Roseobacter denitrificans OCh 114]
gi|115293009|gb|ABI93461.1| rhizobiocin [Roseobacter denitrificans OCh 114]
Length = 434
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 1/130 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + TI + + +VG GND + G+ ++ ++GND DG +G D
Sbjct: 247 NLFGDQGDDTINGNFGNDYIVGGIGNDSLYGDEGDDRLIGNAGNDTIDGGAGKDHMSGGH 306
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ I + + + + + + L A +
Sbjct: 307 GDDIISGGAGDDKIYANQGGDTIYGGDGN-DYMSAGEGNDILYGGRGDDTLAGGAGKDQF 365
Query: 372 IQVIGQDVFE 381
+ IG +
Sbjct: 366 VFDIGDGDDQ 375
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 11/185 (5%)
Query: 203 GNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ ++Y GDD L + + ID + G +
Sbjct: 253 GDDTINGNFGNDYIVGGIGNDSLYGDEGDDRL---IGNAGNDTIDGGAGKD-HMSGGHGD 308
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I+ + + + G D + G N+ GND+ G G DT A +
Sbjct: 309 DIISGGAGDDKIYANQGGDTIYGGDGNDYMSAGEGNDILYGGRGDDTLAGGAGKDQFVFD 368
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + D L+ ADQ ++ + L ++ +D I ++G +
Sbjct: 369 IGDGDDQINDFAFEDNLDLTG---FLLADQTLEDAASMENGNLV-LSNGDDRITLLGLET 424
Query: 380 FESMK 384
+
Sbjct: 425 EDLSW 429
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 61/191 (31%), Gaps = 31/191 (16%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G + I + ++ I + GDD GG ++
Sbjct: 121 TGQTTFDINDAAIVTQAVK-IVATNGDDYF---------------------YGGLADDVA 158
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSY 314
+ ++G +GND++ GN+ ++ G+D +G G D
Sbjct: 159 SGAG-GDDYMIGGAGNDILYGNAGDDRLIGQDGDDSIEGGDGNDRINGGGGEDVVDGGDG 217
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEYTASYEDLIQ 373
+I+ + +V AN + D + F DQ D++N + + + L
Sbjct: 218 DDQIFAGTDDDVVKGANGNDWISGGDGDDNLFGDQGDDTINGNFGNDYIVGGIGNDSLYG 277
Query: 374 VIGQDVFESMK 384
G D
Sbjct: 278 DEGDDRLIGNA 288
>gi|83749293|ref|ZP_00946291.1| RTX family calcium-binding cytotoxins and bacteriocins [Ralstonia
solanacearum UW551]
gi|207723114|ref|YP_002253516.1| hemolysin-type calcium-binding region (partial sequence) protein
[Ralstonia solanacearum IPO1609]
gi|83724024|gb|EAP71204.1| RTX family calcium-binding cytotoxins and bacteriocins [Ralstonia
solanacearum UW551]
gi|206588307|emb|CAQ19002.1| hemolysin-type calcium-binding region (partial sequence) protein
[Ralstonia solanacearum IPO1609]
Length = 245
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ S++ G + + +++ G GND + G N+ + +GNDV DG +G DT
Sbjct: 5 ATTTSTVRG--GDDVLDGGAGNDTLYGGEGNDTLRGGDDNDSLYGGNGNDVLDGGTGNDT 62
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ Y + + +Y + + L ++F D
Sbjct: 63 LSGEGGNDTYLFGKGDGQDFIYSDYDTSSNKL---NVIQFKDGV 103
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 40/110 (36%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+DV+ G + N+ + GND G D+ + + + + + N+
Sbjct: 13 GGDDVLDGGAGNDTLYGGEGNDTLRGGDDNDSLYGGNGNDVLDGGTGNDTLSGEGGNDTY 72
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D + ++D S + + + E ++ G D+ S+
Sbjct: 73 LFGKGDGQDFIYSDYDTSSNKLNVIQFKDGVSPSEVVVTRSGSDLVLSIA 122
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL T ++ G + + T+ +T +++ GND + G ++V +GND G G
Sbjct: 158 DLATIKAKALIGDDSSQTLVGYTEADTINALGGNDNIYGQGGDDVLDGGAGNDTLYGGEG 217
Query: 304 LDTFFYY 310
DT
Sbjct: 218 NDTLRGG 224
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 32/121 (26%), Gaps = 40/121 (33%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + + T+Y G+D L
Sbjct: 5 ATTTSTVRGGDDVLDGGAGNDTLYGGEGNDTL---------------------------- 36
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
G ND + G + N+V +GND G G DT+ + IY
Sbjct: 37 ------------RGGDDNDSLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIY 84
Query: 320 R 320
Sbjct: 85 S 85
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+++VG + D + N+ + G+DV DG +G DT + + +
Sbjct: 174 QTLVGYTEADTINALGGNDNIYGQGGDDVLDGGAGNDTLYGGEGNDTLR 222
>gi|326386940|ref|ZP_08208554.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208620|gb|EGD59423.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Novosphingobium nitrogenifigens DSM 19370]
Length = 336
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 30/85 (35%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I GY+ + + + G +G D + G N+ + SGNDV G DT
Sbjct: 172 IRGYDGADILRGGNGADQLFGGNGADTLYGGWGNDRLYGGSGNDVLYGGENKDTMTGGPG 231
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
+ + + + DF
Sbjct: 232 ADTFAFRPGDFGGATATKADVITDF 256
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 43/138 (31%), Gaps = 6/138 (4%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ S + + VI +VG++G DV+ G ++ G D+ G +G D F
Sbjct: 133 FQSFPFAQGASYVMPGVVIAPIVGTAGPDVLFGTGGADIIRGYDGADILRGGNGADQLFG 192
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER--LRFADQCIDSVNVKQRSILEYTAS 367
+ + D L E D+ + TA+
Sbjct: 193 GNGADTL----YGGWGNDRLYGGSGNDVLYGGENKDTMTGGPGADTFAFRPGDFGGATAT 248
Query: 368 YEDLIQVIGQDVFESMKH 385
D+I + + +
Sbjct: 249 KADVITDFSRAQGDRIDL 266
>gi|254477176|ref|ZP_05090562.1| type I secretion target repeat protein [Ruegeria sp. R11]
gi|214031419|gb|EEB72254.1| type I secretion target repeat protein [Ruegeria sp. R11]
Length = 299
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 54/149 (36%), Gaps = 1/149 (0%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + ID + ++ G E N +I + +++ G GNDV++G + ++ ++G+D
Sbjct: 65 GEGDDNIDARGGND-TVEGGEGNDSIDGGSANDNLFGGEGNDVIVGGNGDDFMRGNAGDD 123
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G D + + D + + S E + + I +
Sbjct: 124 ILVDGRGEDHLVGGQGNDTIVGSGIFDEGKYEDLLQGRLTASSQEEVISTLEYDIRNDTD 183
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKH 385
Q + A + ++ V +
Sbjct: 184 DQGDTINAGAGDDAVVFGKDDTVTGGLGD 212
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 36/80 (45%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E + I ++V G GND + G SAN+ F GNDV G +G D A
Sbjct: 62 ISGGEGDDNIDARGGNDTVEGGEGNDSIDGGSANDNLFGGEGNDVIVGGNGDDFMRGNAG 121
Query: 313 SYLYKIYRFENAIIVYDANE 332
+ R E+ ++ N+
Sbjct: 122 DDILVDGRGEDHLVGGQGND 141
>gi|166368847|ref|YP_001661120.1| hyalin repeat-containing protein [Microcystis aeruginosa NIES-843]
gi|166091220|dbj|BAG05928.1| hyalin repeat protein [Microcystis aeruginosa NIES-843]
Length = 1479
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 21/165 (12%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL----LDLTLIGGVKNYIDLNTESWSSIG 254
G GN+ Y + G D + TL V+N + T + + G
Sbjct: 1243 TGLAGNDTYTVNDAGDLVIEAFNQ----GTDTVQAAISYTLPNNVENLLLTGTGNLNGTG 1298
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + G+SGN+ + G + + +GND +G++G+DT +
Sbjct: 1299 NGLNN----------QITGNSGNNSLNGAAGTDTLIGGAGNDTLNGAAGIDTLTGGTGTD 1348
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
I+ F A + DF +++ Q ++N
Sbjct: 1349 ---IFIFRFGQSTAAALDRVTDFAIGTDKIDLLSQAGAAINAPLA 1390
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 31/103 (30%), Gaps = 3/103 (2%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND IG S + +SG D G +G DT Y + N
Sbjct: 1221 NDDFIGTSGPDTLAGTSGADAMTGLAGNDT--YTVNDAGDLVIEAFNQGTDTVQAAISYT 1278
Query: 337 FLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQD 378
++VE L ++ + + + L G D
Sbjct: 1279 LPNNVENLLLTGTGNLNGTGNGLNNQITGNSGNNSLNGAAGTD 1321
>gi|126727382|ref|ZP_01743217.1| 5'-nucleotidase [Rhodobacterales bacterium HTCC2150]
gi|126703377|gb|EBA02475.1| 5'-nucleotidase [Rhodobacterales bacterium HTCC2150]
Length = 622
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 13/159 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG D D + GG N + G N I+ + + + G +G+D ++G +
Sbjct: 460 NGGTD--DDWISGGQGND---------KLRGQSGNDVISGNDGKDYLNGGAGDDNLMGGA 508
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ G DV +G +G D + + F D ++ DF ++ + +
Sbjct: 509 GVDKIVGGKGADVIEGGTGNDHLWGGKWTADGSSDTF--IFNFGDGKDYIHDFETEFDVI 566
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + A+ DL ++ G + + +
Sbjct: 567 DLSGLATSIEELNSVTTDLGWATVIDLQKLDGGEFNDKL 605
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 19/139 (13%)
Query: 226 GGDDLLDLTL-----IGGVKNYIDLNTESWSS----------IGGYEKNMTIAQHTVIES 270
GG+D+L+ G N I LN + I G + I+ +
Sbjct: 418 GGNDVLNGGSGNDEMHGNAGNDI-LNGGTGEDELFGDQGNDKINGGTDDDWISGGQGNDK 476
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G SGNDV+ GN + +G+D G +G+D + +
Sbjct: 477 LRGQSGNDVISGNDGKDYLNGGAGDDNLMGGAGVDKIVGGKGAD---VIEGGTGNDHLWG 533
Query: 331 NEHKQDFLSDVERLRFADQ 349
+ D SD F D
Sbjct: 534 GKWTADGSSDTFIFNFGDG 552
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + GNDV+ G S N+ ++GND+ +G +G D F + ++ I
Sbjct: 412 ELIKVEGGNDVLNGGSGNDEMHGNAGNDILNGGTGEDELFGDQGNDKINGGTDDDWISGG 471
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N K S + + D L A + ++ G DV E
Sbjct: 472 QGN-DKLRGQSGNDVISGNDGKDYLNGGAGDDNLMGGAGVDKIVGGKGADVIEG 524
>gi|126305193|ref|XP_001376279.1| PREDICTED: similar to matrix metalloproteinase, MT2MMP [Monodelphis
domestica]
Length = 614
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 53/172 (30%), Gaps = 49/172 (28%)
Query: 53 EVARWALGEWSKVVDLTFEETSI---------------------HSDIKFISSNNGYVCT 91
E R A W + L F+E H D G++
Sbjct: 101 EAVRLAFRVWEQATPLVFQEIPYEDIRLRRQMEADIMVLFASGFHGDSSPFDGVGGFLAH 160
Query: 92 PRYDSRY-FMEINFDKADVWRYGIG--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD + W + G L A+HE+GHALGL H + +
Sbjct: 161 AYFPGPGMGGDTHFDADEPWTFSNTDLHGNNLFLVAVHELGHALGLEHSNNPSA------ 214
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+M+ F + D+ +Q++YG P G
Sbjct: 215 -------------IMAPFYQWMDTDNFQ------LPEDDLRGIQQLYGTPDG 247
>gi|119486635|ref|ZP_01620685.1| hypothetical protein L8106_12830 [Lyngbya sp. PCC 8106]
gi|119456252|gb|EAW37384.1| hypothetical protein L8106_12830 [Lyngbya sp. PCC 8106]
Length = 1927
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 60/342 (17%), Positives = 107/342 (31%), Gaps = 52/342 (15%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFD--KADVWRYGIGKGTILSHNALHEIGHA 131
+ SD+ + V F ++ D D G+ + G
Sbjct: 1562 TPTSDVVLTFGGDDMVAAFNGSDTVFGGVDNDLYFGDDGN-DYLLGSDGRDTIISSNG-- 1618
Query: 132 LG-LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+G L + VYG ++ S M + QD D ++G + +V +
Sbjct: 1619 VGDLAAAANSENNDSVYGHQSNDLLQGGPGSDMMFGGKQD---DFTYGGKNSDLVWGDLG 1675
Query: 191 VQKIYGA--PKGSLGNNIY--KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+YG +G+ IE ++ I ++ GDDL++
Sbjct: 1676 TDTLYGDLGNDTMIGDTADENNIEAERGLPGMIDFMWGGAGDDLMN-------------- 1721
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G N T++ ++V G +D+V G + ++ + GND G+ G DT
Sbjct: 1722 --------GGRSNDTLSGGVGNDTVRGGKEDDLVYGEAGDDEMYGDLGNDQLCGNEGNDT 1773
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEY 364
+ ++ +D L + F ++ D + + S Y
Sbjct: 1774 VYGDINDNDTP------------SDIPGRDTLCGGIGNDILFGNEDQDRLCGGEDSDTLY 1821
Query: 365 TASYED-LIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYL 403
ED L G D + G R I F
Sbjct: 1822 GGLGEDILAGEQGDDWLFGDQGNDLISGGSGVDRFILFSGSG 1863
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 18/136 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ GN+ ++ D+P D G D L GG+ N I + G E
Sbjct: 1767 GNEGNDTVYGDINDNDTPS-----DIPGRDTL----CGGIGNDI---------LFGNEDQ 1808
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +++ G G D++ G ++ F GND+ G SG+D F ++ S I
Sbjct: 1809 DRLCGGEDSDTLYGGLGEDILAGEQGDDWLFGDQGNDLISGGSGVDRFILFSGSGTDTIQ 1868
Query: 320 RFENAIIVYDANEHKQ 335
F+ +
Sbjct: 1869 DFQLGTDLIALGGGLT 1884
>gi|166367555|ref|YP_001659828.1| hemolysin-type calcium-binding region protein [Microcystis
aeruginosa NIES-843]
gi|166089928|dbj|BAG04636.1| hemolysin-type calcium-binding region protein [Microcystis
aeruginosa NIES-843]
Length = 328
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N ++ ++++G +GND + G + + GND+ G G DT S
Sbjct: 158 GGDGNDVLSGGEGADTLIGGNGNDTLNGGNGFDSLIGGDGNDIISGIGGADTLIGGLGSD 217
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + NE D ++D
Sbjct: 218 TLTGGNGNDRFVYNNPNEGG-DLIADFNI 245
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 13/115 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G+D+L + G I G N T+
Sbjct: 143 FNDTLTGGNSTDTLIGGDGNDVL--SGGEGADTLI-----------GGNGNDTLNGGNGF 189
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S++G GND++ G + G+D G +G D F Y P+ + N
Sbjct: 190 DSLIGGDGNDIISGIGGADTLIGGLGSDTLTGGNGNDRFVYNNPNEGGDLIADFN 244
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 4/116 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG + V + L I G N T+ ++++G GNDV+ G
Sbjct: 110 TGGIVNTKASGPQVVSSIAPLLLTDSYFITGSAFNDTLTGGNSTDTLIGGDGNDVLSGGE 169
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ +GND +G +G D+ + + D L+
Sbjct: 170 GADTLIGGNGNDTLNGGNGFDSLIGGDGNDIIS----GIGGADTLIGGLGSDTLTG 221
>gi|147901930|ref|NP_001079682.1| matrix metallopeptidase 7 (matrilysin, uterine) [Xenopus laevis]
gi|28461366|gb|AAH46939.1| MGC53510 protein [Xenopus laevis]
Length = 259
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 61/182 (33%), Gaps = 40/182 (21%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SD--IKFISSN 85
R+ LT +++ + + A G WS V L F + S +D I+F +
Sbjct: 99 RWSKAQLTYSIVNYTPDLRRQVVDDAIQRAFGVWSNVTPLQFTKVSSGNADIFIRFGART 158
Query: 86 NG---------YVCTPRYDSRYFM--EINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+G V Y + + +FD+ + W G L A HE GH+LGL
Sbjct: 159 HGDSNPFDGPSGVLAHAYGPGRGIGGDAHFDEDERWTSSRA-GFNLFLVAAHEFGHSLGL 217
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H D +Y + + S DI +Q I
Sbjct: 218 DHS-----------------TDPQALMFPTYHYVETTSFRLS--------QDDINGIQSI 252
Query: 195 YG 196
YG
Sbjct: 253 YG 254
>gi|284008169|emb|CBA74419.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 1154
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 6/173 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
K T+ GDD+L +GG + + S I I +
Sbjct: 331 KGGSGYSTLIGGMGDDVL----VGGSGHNTLIGGSGKSVIYAGPNGDKIYASKGGSIIYA 386
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--AN 331
G D++ G+ ++V GN + DG G++ + Y+I R ++ + D A
Sbjct: 387 GGGADMIFGSVGDDVIEVGHGNAMIDGDGGINIVSLHGNHGDYQITRTDSGYQIADKVAG 446
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L ++++L FAD + +E +++ +V + +
Sbjct: 447 RDGTVTLKNIQKLNFADISAVDLQTPNAMPVEDVLTHDQQGKVFSRTRTHLIA 499
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 68/235 (28%), Gaps = 46/235 (19%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQ 220
S F + AS A + +D + V +YG G++ K
Sbjct: 205 STFNHITTTAYASHSDSAQTLDADKLGVSNLYG----GSGDDQLIAAKTGSWLVGGAGSN 260
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T G+D+ ++ KN + + I G + + + G SGND +
Sbjct: 261 TYVGGAGNDVFVISASDDSKNIHGNGGQDMAIITGNQGMILDMDQAGLTIAEGGSGNDTI 320
Query: 281 I----------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
I G S + G+DV G SG +T +
Sbjct: 321 ISGGPNGVFMKGGSGYSTLIGGMGDDVLVGGSGHNTLIGGSGKS---------------- 364
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ +A D + + + Y D+I D + H
Sbjct: 365 -------------VIYAGPNGDKIYASKGGSIIYAGGGADMIFGSVGDDVIEVGH 406
>gi|291567847|dbj|BAI90119.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 674
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ + +V G+D+++GN +++ F GND G G DT +
Sbjct: 513 QGNNTLFGGQGNDILVAGEGDDMLLGNKDDDILFGGDGNDSIYGGQGNDTLVAGNGN--- 569
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+I + + D L E + + + + SI+ +D++ ++G
Sbjct: 570 QILFGDEGNDILFGGAKGADTLVGGE----GNDTLVMLPGEGYSIVTDFQVNQDMVVLLG 625
Query: 377 QD 378
Sbjct: 626 SP 627
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 12/181 (6%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+T+ GDDLL + TL GG N I + E + G + + + +S+ G
Sbjct: 498 ETLLGFQGDDLLQVSQGNNTLFGGQGNDILVAGEGDDMLLGNKDDDILFGGDGNDSIYGG 557
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSS-GLDTFFYYAPSYLYKIYRFENAIIVYD--AN 331
GND ++ + N + F GND+ G + G DT + + E IV D N
Sbjct: 558 QGNDTLVAGNGNQILFGDEGNDILFGGAKGADTLVGGEGNDTLVMLPGEGYSIVTDFQVN 617
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L + N Y A + L+ ++ S++ FG
Sbjct: 618 QDMVVLLGSPDDYEI----GSIPNGFNDGTAIYEAGSDQLVGILEGVTNVSLEDDNIFGW 673
Query: 392 S 392
+
Sbjct: 674 A 674
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G ++N I E+++G G+D++ + NN F GND+ G D
Sbjct: 482 WFGSDQNDVIIGTASDETLLGFQGDDLLQVSQGNNTLFGGQGNDILVAGEGDDMLLG--N 539
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC--IDSVNVKQRSILEYTASYED 370
++ + +Y + + ++ F D+ I K L +
Sbjct: 540 KDDDILFGGDGNDSIYGGQGNDTLVAGNGNQILFGDEGNDILFGGAKGADTLVGGEGNDT 599
Query: 371 LIQVIGQD 378
L+ + G+
Sbjct: 600 LVMLPGEG 607
>gi|226328840|ref|ZP_03804358.1| hypothetical protein PROPEN_02741 [Proteus penneri ATCC 35198]
gi|225202026|gb|EEG84380.1| hypothetical protein PROPEN_02741 [Proteus penneri ATCC 35198]
Length = 306
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 4/138 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N TI + + + G G+D + G N+ + +GND G SG +
Sbjct: 22 FHGAKGNDTIEGNDGHDRLYGDDGDDTLRGGHGNDRLYGGNGNDKLIGGSGNNYLSGGDG 81
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEYTASYE 369
++ + + D L E + D I Y A Y
Sbjct: 82 DDELQVQGNKTNYNILLGG-KGNDKLYGSESVDLLDGGEGDDILKGGNGDDIYRYFAEYG 140
Query: 370 DLIQVIGQDVFESMKHFY 387
I + +
Sbjct: 141 HHIIEDEGGNNDKLGLLN 158
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS ND +G+ N++F + GND +G+ G D + + + +
Sbjct: 1 MEEIIGSDRNDTFLGSKFNDIFHGAKGNDTIEGNDGHDRLYGDDGDDTLRGGHGNDRLYG 60
Query: 328 YDANE-----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ N+ ++LS + D+ N +IL + L D+ +
Sbjct: 61 GNGNDKLIGGSGNNYLSGGD---GDDELQVQGNKTNYNILLGGKGNDKLYGSESVDLLDG 117
>gi|5020211|gb|AAD38037.1| matrix metalloproteinase-13 [Canis lupus familiaris]
Length = 196
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 52/152 (34%), Gaps = 21/152 (13%)
Query: 54 VARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDS-------------RYF 99
+ A WS V L F +DI + +D Y
Sbjct: 1 AFKKAFKVWSDVTPLNFTRLHDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYG 60
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVY---GVDNDYEN 155
+ +FD + W KG L A HE GH+LGL H +P+Y G +
Sbjct: 61 GDAHFDDDETWT-SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLP 119
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
D + + S + P D D + + TP D
Sbjct: 120 DDDVQGIQSLYGPGD--EDPNPRHPKTPDKCD 149
>gi|226947104|ref|YP_002802177.1| secreted mannuronan C-5 epimerase [Azotobacter vinelandii DJ]
gi|226722031|gb|ACO81202.1| Secreted mannuronan C-5 epimerase [Azotobacter vinelandii DJ]
Length = 998
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 6/135 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +A +++ GSS + ++G + N+ +GND+ DG +G DT + S +++
Sbjct: 825 VVLAGGDGDDTLSGSSAAEELLGGAGNDSLDGGAGNDILDGGAGRDTLSGGSGSDIFRFG 884
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ Y + + D + D D +++ Y + ++ D
Sbjct: 885 GALDSFRNYASGTNGTDSIVDFTH------GTDLIDLSALGYTGLGDGYNGTLAIVLNDA 938
Query: 380 FESMKHFYEFGLSEG 394
+EG
Sbjct: 939 GTKTYLKNRESDAEG 953
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDL-NTESWSS 252
G N+ Y I+ + + + ++Y + ++ + + L G DL T ++
Sbjct: 327 GNTIVGSANSTYGIQERDDGTDY-SSLYANSVSNVQNGSVRLYGANSVVSDLPGTGQQAT 385
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ E+++G GND + G + N++ +G D G +G D F A
Sbjct: 386 LEGTAGNDTLGGSDAHETLLGLDGNDRLNGGAGNDILDGGAGRDNLTGGAGADLFRVSAR 445
Query: 313 SYLYKIY--RFENAIIVYDANEHKQDF 337
+ Y+ F + I +DA++ + D
Sbjct: 446 TDSYRTDSASFNDLITDFDASQDRIDL 472
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 41/96 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + E+++G +GND + G + +++ +G D G +G D F + A
Sbjct: 537 IEGDAGDNALLGTSAAETLLGHAGNDTLDGGAGDDILVGGAGRDSLTGGAGADVFRFDAL 596
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
S + Y + A+ + DV L F
Sbjct: 597 SDSQRNYDIGDNQGDRIADFAVGEDKLDVSALGFTG 632
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--RFENAIIVYDA 330
GS+GND + G +A+ V G D G +G D F + + Y+ + + I +DA
Sbjct: 696 GSAGNDSLQGTAADEVIHGGGGRDTLAGGAGADVFRFSELTDSYRTDSASYADLITDFDA 755
Query: 331 NEHKQDF 337
+E + D
Sbjct: 756 SEDRIDL 762
>gi|329848566|ref|ZP_08263594.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843629|gb|EGF93198.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1009
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 82/236 (34%), Gaps = 19/236 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG------GVKNYIDLNTESWSS 252
G+ GNNI + + + G+D ++ G + +N+ S
Sbjct: 677 TGNAGNNI------LTGNTGVNVLTGGLGNDTYNVQNTGDNVVEAANEGTDLINSTVTYS 730
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + G+ +++ GNS NN+ + ND G +G DT+ A
Sbjct: 731 LSGRQVENLTLTGSANVNATGNGFANILTGNSGNNILDGGANNDTLAGGAGNDTYMISAA 790
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
+ + N I +++E + +++ ++L A L
Sbjct: 791 GDV--VTENLNEGIDTLETPFTTTLGANLENVTLTGSADLNANGNALNNVLTGNAGVNVL 848
Query: 372 IQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGS--YDDLRNVFGSDRGAAA 423
G D ++ G D+ F + Y + Y + N+ GSD A
Sbjct: 849 TGGAGHDTYYIQNAGDNVVETSGNGSDVIFSTVTYSLNLRYAETLNLIGSDNVNAT 904
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 69/220 (31%), Gaps = 33/220 (15%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESWSSIGGYEKNM-- 260
I Q + T Y G L G N +DL + N+
Sbjct: 432 SINQNQALFSLLGTTYGGNGITTFALPDFRGRTAIGAGNGVDLGERGGTESYSLSTNLFP 491
Query: 261 --TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T+ + S+ G++ ND + G N+ ++GND DG +G DT Y I
Sbjct: 492 ALTLNGNGGPNSLFGANLNDFLNGFDGNDRLVGNAGNDRIDGGTGNDTMEGGFGDDTYYI 551
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFA--------------------DQCIDSVNVKQ 358
++II D N D+ A Q
Sbjct: 552 DSTADSII--DGNGQGYDYAFATATFSLAFTFVDVLYLTGSANINGTGNGQSNLITGNTG 609
Query: 359 RSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
+ L+ A+ + L +G D V ++ +EG D
Sbjct: 610 NNRLDGAANNDTLTGGLGDDTYVLSNVGDVINENANEGTD 649
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 35/104 (33%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S + + GN NN G D G G D FF+ A S I F A
Sbjct: 902 NATGNSLGNTLGGNDGNNTINGKGGTDNLSGGLGADLFFFDANSGTDTITDFSAAQNDSI 961
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+++ + + + I +A D++
Sbjct: 962 NIAAYTGGVANAGLVTQSGSNVVITLGGANVITVNSALVADVLA 1005
>gi|294678042|ref|YP_003578657.1| integrin alpha repeat/hemolysin-type calcium-binding repeat family
protein [Rhodobacter capsulatus SB 1003]
gi|294476862|gb|ADE86250.1| integrin alpha repeat/hemolysin-type calcium-binding repeat family
protein [Rhodobacter capsulatus SB 1003]
Length = 1071
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 245 LNTESW-SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L S+ S + G N T++ T ++V+G +GND++ G + + ++G+D DG +G
Sbjct: 502 LYGGSFASRLSGSIGNDTLSGSTGDDAVLGFAGNDLLYGAAGLDALLGAAGDDTLDGGAG 561
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
DT A Y + + + + E +D
Sbjct: 562 DDTLRGGAGDDTYVVDSATDTVCEFCTPEGTED 594
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 27/194 (13%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL--------------GNNIYKIEVQQK 214
+ DA G+ ++ + + GA G++ Y ++
Sbjct: 522 GSTGDDAVLGFAGNDLLYGAAGLDALLGAAGDDTLDGGAGDDTLRGGAGDDTYVVDSATD 581
Query: 215 DSPFIQT---IYDSGGDDL------LDLTLIGGV---KNYIDLNTESWSSIGGYEKNMTI 262
T D+GG D DLT G + I + T + S+ G N I
Sbjct: 582 TVCEFCTPEGTEDAGGADTVLARVSYDLTRCAGACYIETLILIGTGALSATGNALGNRLI 641
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G D++ G+ ++ GND G +G D A + +Y +
Sbjct: 642 GNGAAN-LLRGLEGADLLDGSDGDDRLEGGDGNDRLQGGAGADVLLGGAGNDVYTVESDA 700
Query: 323 NAIIVYDANEHKQD 336
+ ++ + +D
Sbjct: 701 DQVLETLSETDLRD 714
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 66/194 (34%), Gaps = 28/194 (14%)
Query: 200 GSLGNNIYKI--EVQQKDSPFIQT-IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN++Y + + Q +T + D+GG D + L + S+S
Sbjct: 687 GGAGNDVYTVESDADQVLETLSETDLRDAGGIDTV-------------LTSVSYSLAAPG 733
Query: 257 EKNM--TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + T + G+ ++ + GN N +G+DV G +G D +F +
Sbjct: 734 RAFVERLVLTGTAAINATGNGLDNTLTGNGGANRLSGGAGSDVMIGGAGNDIYFVERVTD 793
Query: 315 L-------YKIYRFENAIIVYDANEHKQD--FLSDVERLRFADQ-CIDSVNVKQRSILEY 364
+ V + + + VERL I++ + L
Sbjct: 794 RVVETISESDLRDAGGIDTVMTSVSYGLTGATRAFVERLVLTGTAAINATGNALDNWLTG 853
Query: 365 TASYEDLIQVIGQD 378
+ L G+D
Sbjct: 854 NGAANRLDGGAGKD 867
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 31/79 (39%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + + + GS GND + G++ ++ +GND+ G++GLD
Sbjct: 487 PGAQGDPTAAGAAVVLYGGSFASRLSGSIGNDTLSGSTGDDAVLGFAGNDLLYGAAGLDA 546
Query: 307 FFYYAPSYLYKIYRFENAI 325
A ++ +
Sbjct: 547 LLGAAGDDTLDGGAGDDTL 565
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 26/134 (19%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIY-----DSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G GN+ Y +E ++TI D+GG D + ++ S+S G
Sbjct: 871 GGAGNDTYIVE--NAADRVVETISETDLRDAGGIDTVMTSV-------------SYSLTG 915
Query: 255 GYEKNMT---IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY- 310
+ + T + G+ + + GN+ N G D G G D+F +
Sbjct: 916 AAPRAFVERLVLTGTAAINGTGNGLANQISGNAGANRISGGLGLDTLSGGGGADSFVFDT 975
Query: 311 --APSYLYKIYRFE 322
AP L +I F
Sbjct: 976 APAPDNLDRILDFN 989
>gi|262092788|gb|ACY25768.1| alkaline metalloprotease [uncultured bacterium]
gi|262092798|gb|ACY25773.1| alkaline metalloprotease [uncultured bacterium]
gi|262092810|gb|ACY25779.1| alkaline metalloprotease [uncultured bacterium]
gi|262092812|gb|ACY25780.1| alkaline metalloprotease [uncultured bacterium]
Length = 65
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + ++D GG D LD + +DLN ES+S +GG + N++IA
Sbjct: 12 MSLTSARDKPVFCVWDGGGVDTLDFSGFS-QDQKVDLNAESFSDVGGLKGNVSIA 65
>gi|257092096|ref|YP_003165737.1| Hemolysin-type calcium-binding domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044620|gb|ACV33808.1| Hemolysin-type calcium binding domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 3488
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 3/133 (2%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + N I ++ G +GND + G S N+ GND G G D
Sbjct: 1079 RGDQYQEGPAGSGNDVIMGDKGNDAAWGGAGNDYIDGGSDNDTLRGGDGNDRLKGGDGED 1138
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A + + +I + + E D++ +Q +
Sbjct: 1139 FLSGGADDDTLEGDAGNDTLIGDGGGDELHGAAGNDELH---GDTGDALVTEQGDDRLFG 1195
Query: 366 ASYEDLIQVIGQD 378
+ +D ++ G +
Sbjct: 1196 DAGDDYMRGYGGN 1208
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 9/128 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS---------ANNVFFESSGNDVFDGSS 302
S+ G + + G +G+D++ GN+ + GND +G
Sbjct: 696 SVVGETGEDAFYGGAGSDQLDGGAGDDILEGNADADELRGGAGRDTLLGGQGNDRLEGGD 755
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
DT E+ ++ + + + + +++ + + + +K
Sbjct: 756 NNDTLVGGQGDDTLVGGDGEDTYVINTGDGNDHIVDTGMNFIKYNGRLVTGLFLKSTDSD 815
Query: 363 EYTASYED 370
+YT + +D
Sbjct: 816 DYTFAGDD 823
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 65/196 (33%), Gaps = 15/196 (7%)
Query: 171 SMMDASFGYCATPMVSDIVAVQK---IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ D + ATP+ I A + A K L + T+ G
Sbjct: 2620 TATDRAGASVATPLTLQIAAASPAALLGTANKDVLVGT--SGNDLLNGAAGADTMRGGDG 2677
Query: 228 DDLL--DLTLIGGVKNYIDLNTESWS----SIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
DD D V+ + WS ++ +N+ +A I + G++ + +
Sbjct: 2678 DDTYVVDERGDTVVELANQGSDTVWSLVSHTLADNVENLVLAAGASI-NGTGNALRNRLT 2736
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GNS NNV + D +G +G DT++ + + IV ++V
Sbjct: 2737 GNSGNNVLDGGAEADTLEGGTGNDTYYVGDKDTVIEAADAGKDTIVSGIRW---TLGANV 2793
Query: 342 ERLRFADQCIDSVNVK 357
E L +
Sbjct: 2794 ENLTLTGTAAINGYGN 2809
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N I+ N + + + G N T+ + +++ G SG D + G ++ +G+D
Sbjct: 2087 DNVINGNAAA-NVLKGGAGNDTLRAYGGSDNLDGGSGRDDLWGGEGDDTLDGGTGDDTLS 2145
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G G DT+ + S +I D + + D ++ L A
Sbjct: 2146 GVFGADTYLFRRGSGTDRIIDDRRLGAPVDRDNIRFDEGIRMQDLTIA 2193
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 2/134 (1%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S++G + V + G G+D + G ++ +GND +G +G DT
Sbjct: 1967 LSTLGTSAADSLTGFDGVGNRLFGFDGSDTLSGGDRGDLLDGGNGNDWLEGLAGADTLVG 2026
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A + +Y I N +I+ A E + S V A Q + A+
Sbjct: 2027 GAGNDVYDIDDA-NDLIIEHAGEGRDTAYSWV-SFDLASQGSGVEVLTLLGSNPLGAAGN 2084
Query: 370 DLIQVIGQDVFESM 383
+L VI + ++
Sbjct: 2085 ELDNVINGNAAANV 2098
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N ++ T ++ G +G+D + G + +++ ++ D G +G DT
Sbjct: 688 VFGGDGNDSVVGETGEDAFYGGAGSDQLDGGAGDDILEGNADADELRGGAGRDTLLGGQG 747
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + + ++ D L +
Sbjct: 748 NDRLEGGDNNDTLV----GGQGDDTLVGGD 773
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G++GND + G S N+ +GND G +G DT+F+ S I ++++
Sbjct: 1559 GTTGNDTLTGTSVNDRLDGGAGNDSLRGGAGSDTYFWGLDSGNDTIDNSDSSLDT 1613
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 270 SVVGSSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ +GND+ + GN+ ++ +GND DG G DT Y + +A
Sbjct: 3040 TAATLTGNDLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADA-- 3097
Query: 327 VYDANEHKQDFLSD---------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+++ + D + +ERL R+ Y + + + G
Sbjct: 3098 IHEDADAGFDTVYSSVTWTLGEHLERLYLTGGTAIDATGNARANTLYGHANSAVNILTGG 3157
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 25/154 (16%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG+D LD G + DL+ + G E N T+ +++++G +G D + +
Sbjct: 1206 GGNDTLD-----GGAGHDDLSGGGNDDVLDGGEGNDTLFGDDGLDTLLGGTGTDYLDSGA 1260
Query: 285 ANNVFFESSGNDVFD------------------GSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ SGND G G DT + Y + I
Sbjct: 1261 DDDLLDGGSGNDALRGGDGDDLLDGGSGSDGLRGGDGADTLIGGTDTD-YLEGGAGDDIY 1319
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
++ A + +D VE + A+ V
Sbjct: 1320 LFAAGDSPRDADGFVEYVVDAEGDNTIVFSNATP 1353
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 270 SVVGSSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ +GND+ + GN+ ++ +GND DG G DT Y + +A
Sbjct: 2876 TAATLTGNDLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADA-- 2933
Query: 327 VYDANEHKQDFLSD---------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+++ + D + +ERL R+ Y + + + G
Sbjct: 2934 IHEDADAGFDTVYSSVTWTLGEHLERLYLTGGTAIDATGNARANTLYGHANSAVNILSGG 2993
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ + + + G++G+D + G + N+ +GNDV +G +G DT + S L+
Sbjct: 3207 TLTGNDLANRLRGNAGDDRLAGLAGNDTLDGGAGNDVLEGGAGNDTLQDSSGSALFTGGA 3266
Query: 321 FENAII 326
N +
Sbjct: 3267 GNNTLS 3272
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 48/190 (25%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------ 322
+++ G+D+V G + ++V GND G +G D + + I +
Sbjct: 1696 DTIDALGGDDLVDGLAGDDVITGGRGNDTLRGGAGSDHYRFAVGDGSDLIVDDDVTADHA 1755
Query: 323 ---------NAIIVYDANEHKQDFL-------------------SDVERLRFADQCIDSV 354
++++ + D + +E RFAD +V
Sbjct: 1756 DVVEFLDVASSVVTVTRPHNGNDLVLAYGGSDRLTIQAYFAGASHQIEEFRFADSVRWNV 1815
Query: 355 NVKQRSILEYTASYEDLIQVIGQD-------------VFESMKHFYEFGLSEGR-DITFD 400
Q +L + +D+I + G R F
Sbjct: 1816 GDLQERVLVTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFG 1875
Query: 401 SYLYLGSYDD 410
+ +YL + D
Sbjct: 1876 ADIYLFANGD 1885
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ +D + +++ +G+DV G G DT A S Y+ + + ++ D ++
Sbjct: 1691 ATLASDTIDALGGDDLVDGLAGDDVITGGRGNDTLRGGAGSDHYRFAVGDGSDLIVD-DD 1749
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
D VE L A + + L D
Sbjct: 1750 VTADHADVVEFLDVASSVVTVTRPHNGNDLVLAYGGSD 1787
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 22/195 (11%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D LD GG N + ++ + ++ G +G+ + +G + N
Sbjct: 3231 GNDTLD----GGAGNDVLEGGAGNDTLQDSSGSALFTGGAGNNTLSGGAGSQIYLGGTGN 3286
Query: 287 NVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-----FLS 339
+ GND+ + G DT A + + D + K D ++
Sbjct: 3287 DTLRTGPGNDIIAFNRGDGQDTL--AAGDSGQDVLSLGGVVAYTDLSLDKVDRDLVVTIA 3344
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+++ F D + RS+L E + L + R +F
Sbjct: 3345 TGDQITFTDWYASAPGAASRSVLRLQVIAEAMADFDAGGSDP---------LRDERVESF 3395
Query: 400 DSYLYLGSYDDLRNV 414
D + ++D R
Sbjct: 3396 DFGGLVDAFDAARAA 3410
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 45/164 (27%), Gaps = 37/164 (22%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+G G++IY F++ + D+ GD+ + + I + S G
Sbjct: 1311 EGGAGDDIYLFAAGDSPRDADGFVEYVVDAEGDNTIVFSNATPTDLRIANSGGSLLITYG 1370
Query: 256 YEKNMTI-------------AQHTVIESV---------------------VGSSGNDVVI 281
+ I A + G S +D ++
Sbjct: 1371 TNDQLLIKDGLAGSIGHYRFANGETLSYSELIGRLVDTPMGAASGGRSFWFGGSLDDYLV 1430
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ F G+D G G +T+ Y +I
Sbjct: 1431 ATDGHTTFSGGRGDDTLIGYGGRNTYLYSRGDGTDRIIDTSTKT 1474
Score = 44.3 bits (103), Expect = 0.067, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 12/93 (12%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + N+ +S ND DG +G D+ A S Y + ++ D ++ D
Sbjct: 1557 LTGTTGNDTLTGTSVNDRLDGGAGNDSLRGGAGSDTY-FWGLDSGNDTIDNSDSSLDT-- 1613
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ N L + S++DL+
Sbjct: 1614 ---------DRLIIGNGLLADDLIFARSHDDLV 1637
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Query: 253 IGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G I ++ + G G+D + G + GND G G D + +
Sbjct: 1824 VTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFGADIYLFAN 1883
Query: 312 PSYLYKIYRFENAIIVYDA 330
I + D
Sbjct: 1884 GDGADVINETNDTNGTVDT 1902
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDV-VIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++G ++ + + + + G +G D + G ++ + D G G D
Sbjct: 1814 NVGDLQERVLVTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGG 1873
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ +Y + A ++ + N D V+ LR D
Sbjct: 1874 FGADIYLFANGDGADVINETN----DTNGTVDTLRLTD 1907
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 16/145 (11%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVF- 298
I+ + + + G++ + ++ V +++ G GND + G ++ F G DV
Sbjct: 1832 VINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFGADIYLFANGDGADVIN 1891
Query: 299 ---DGSSGLDTFFYY----------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
D + +DT A I R + V ++ + +E++
Sbjct: 1892 ETNDTNGTVDTLRLTDLAAAAVSELARVGSDLIVRLGGSDQVTVRQQYNAATSAGIEQIT 1951
Query: 346 FADQCIDSVNVKQRSILEYTASYED 370
FAD + + + + S D
Sbjct: 1952 FADGLTWTADDIKARLSTLGTSAAD 1976
Score = 40.9 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 264 QHTVIESVVGSSGNDVVIG--NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
T I+ G++ + + G NSA N+ G+D++ +G D A +Y +
Sbjct: 3128 GGTAID-ATGNARANTLYGHANSAVNILTGGLGDDIYYLGAG-DRAVEDADQGNDSVYGY 3185
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + EH ++ L D L A + L G DV E
Sbjct: 3186 GSEHTLAANVEHLFLAVATAATLTGNDLANRLRGNAGDDRLAGLAGNDTLDGGAGNDVLE 3245
Query: 382 SMK 384
Sbjct: 3246 GGA 3248
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 39/137 (28%), Gaps = 7/137 (5%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D + G + +G D +G +G D + + V
Sbjct: 944 SGDDWISGGMNVDFVAGGTGRDYIEGGAGGDDLLAGGDADDVIFGDLAATLAVQIREAGN 1003
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG---- 390
+ + ++ A + L + G D F+ +G
Sbjct: 1004 N---EPGDLVSGQGGNDALYGSSSSDLIYGGAGDDFLGGLGGDDFLLGDVDFFLYGVWDV 1060
Query: 391 LSEGRDITFDSYLYLGS 407
+G + FD L S
Sbjct: 1061 RRDGLNFIFDFTQILSS 1077
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 14/52 (26%)
Query: 275 SGNDVVIGNSANNVFFESSGNDV--------------FDGSSGLDTFFYYAP 312
+GND V G N+ G+DV G +G DT + +
Sbjct: 2282 AGNDTVTGGGGNDSLRGGDGDDVLYGDSGSRSSSDDQLYGDAGDDTLYGGSS 2333
>gi|302874118|ref|YP_003842751.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|307689624|ref|ZP_07632070.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|302576975|gb|ADL50987.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
Length = 299
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 14/109 (12%)
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR------SITFNPD 570
E F Y+A + D+ + + H+ NFG +EGR F
Sbjct: 162 EEMKIRTFSKTWYMAQYPDVAKSGIEP-------YIHYINFGKKEGRLPLPPKPADFTDA 214
Query: 571 LYLTSYDDLWNVFGS-DRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
YL D+ D + HY +G +E R S K L
Sbjct: 215 GYLICNPDVVEAVNKGDYVSGLDHYYEYGWRENRKWNCSQGAIKPSGEL 263
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-----NPDAFKALEYI 530
EE + TF Y+ Y D+ HYI G KEGR P F Y+
Sbjct: 162 EEMKIRTFSKTWYMAQYPDVAKSG----IEPYIHYINFGKKEGRLPLPPKPADFTDAGYL 217
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ D++ A + +G DH+ +G+ E R
Sbjct: 218 ICNPDVVEAVNKGDYV--SGLDHYYEYGWRENR 248
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 14/92 (15%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------TFDSYLYLGSY 492
F Y+A + D+ + + H+ NFG +EGR F YL
Sbjct: 168 TFSKTWYMAQYPDVAKSGIEP-------YIHYINFGKKEGRLPLPPKPADFTDAGYLICN 220
Query: 493 DDL-RNVFGSDRGAAARHYITHGVKEGRNPDA 523
D+ V D + HY +G +E R +
Sbjct: 221 PDVVEAVNKGDYVSGLDHYYEYGWRENRKWNC 252
>gi|113478347|ref|YP_724408.1| multicopper oxidase, type 2 [Trichodesmium erythraeum IMS101]
gi|110169395|gb|ABG53935.1| multicopper oxidase, type 2 [Trichodesmium erythraeum IMS101]
Length = 1346
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 46/145 (31%), Gaps = 42/145 (28%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ G+NIY +E GDD L+ G
Sbjct: 1159 NGDNNGDNIYGLE----------------GDDTLN----------------------GNF 1180
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + I+S+ G +GND G + G+DV +G G D S ++
Sbjct: 1181 GNDLLYGFRGIDSLNGGAGNDSFRGGKDEDTLRGGEGSDVLNGEEGNDILIGGEGSDIFV 1240
Query: 318 IYRFENAIIVYDANEHKQDFLSDVE 342
E ++D D ++D
Sbjct: 1241 FDTDE----IFDPEILGIDSITDFN 1261
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 9/146 (6%)
Query: 238 GVKNYIDLNTESW--SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G++ + L + + G N I +++ G G+D + GN N++ + G
Sbjct: 1132 GIREILQLRDGNLLAENKIGTTGNNLINGDNNGDNIYGLEGDDTLNGNFGNDLLYGFRGI 1191
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCID 352
D +G +G D+F + E D L E F I
Sbjct: 1192 DSLNGGAGNDSFRGGKDEDTLR----GGEGSDVLNGEEGNDILIGGEGSDIFVFDTDEIF 1247
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + +DLI++
Sbjct: 1248 DPEILGIDSITDFNASKDLIELGAMS 1273
>gi|284799740|ref|ZP_05984739.2| outer membrane secretion protein [Neisseria subflava NJ9703]
gi|284797008|gb|EFC52355.1| outer membrane secretion protein [Neisseria subflava NJ9703]
Length = 421
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 37/109 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G I +++ G + D + G + +GND +G S D
Sbjct: 157 IYGGNGTDVIYAGAGNDTIYGDADGDSLYGEEGKDYLQGGAGNDYLNGGSSADIMRGGDG 216
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ +Y + + +I Y D + V D + + +++
Sbjct: 217 NDVYFVDNVNDQVIEYGNAHAGIDTVRTVIDYTLTDHVENLILQGMQNL 265
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 6/140 (4%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-LTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN++Y V + I+ G D + + + +L + ++ G ++
Sbjct: 216 GNDVY--FVDNVNDQVIEYGNAHAGIDTVRTVIDYTLTDHVENLILQGMQNLNGTGNSLN 273
Query: 262 IAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI- 318
+ G +G+D ++G N+ GND+ G +G DT+F+ I
Sbjct: 274 NNIEGNGGNNHLYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKGYGHDTIR 333
Query: 319 YRFENAIIVYDANEHKQDFL 338
N +++ D L
Sbjct: 334 EESGNDTLLFGKGVAASDVL 353
>gi|126739119|ref|ZP_01754813.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126719736|gb|EBA16444.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 692
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 24/135 (17%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ P+ +I GDD + ++ G + N +I +S+ G
Sbjct: 343 EADPYADSISGGAGDDTI-------------FGEGGDDTLLGGDDNDSIDGGEGADSLEG 389
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGL--------DTFFYYAPSYLYKIYR---FE 322
SG+D +IG + + +G+D G SG DT + +
Sbjct: 390 GSGDDTLIGGAGVDTLVGGTGSDSITGGSGDDSIKLSEGDTATGGDDRDTFTLIDRGETG 449
Query: 323 NAIIVYDANEHKQDF 337
+A I D NE D+
Sbjct: 450 SASITIDGNEGGDDW 464
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + TI ++++G ND + G + SG+D G +G+DT
Sbjct: 350 SISGGAGDDTIFGEGGDDTLLGGDDNDSIDGGEGADSLEGGSGDDTLIGGAGVDTLVGGT 409
Query: 312 PSYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S +++I + D D + D+ E ++
Sbjct: 410 GSDSITGGSGDDSIKLSEGDTATGGDDR----DTFTLIDRGETGSASITIDGNEGGDDWD 465
Query: 370 DL 371
L
Sbjct: 466 TL 467
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 45/152 (29%), Gaps = 14/152 (9%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ ++ + P + +Y P + + +P T D
Sbjct: 38 WTWSGTVGGFPYTDEVEPGTYYLATDGNVYFTPDLGPVDT---LTSATATNPPAYTDLDG 94
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNS 284
+D T DL +S G + + + + + +GND + S
Sbjct: 95 ----TIDGTAGA------DLIDSGYSDAEGDQVDNGLGGGAGNDDTIEAGAGNDTIDAGS 144
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ F +G D +G SG D +
Sbjct: 145 GADSIFGGAGADSIEGGSGADLIHGDTEAEQD 176
>gi|300866966|ref|ZP_07111638.1| putative Chloride peroxidase [Oscillatoria sp. PCC 6506]
gi|300335070|emb|CBN56804.1| putative Chloride peroxidase [Oscillatoria sp. PCC 6506]
Length = 575
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + IA + + GND++ G + +++ + + GND G +G DT
Sbjct: 30 VYGDKGDDAIAGGDGKDKLNAGQGNDLIDGGADDDIIWGAKGNDRILGEAGNDTLIGGKG 89
Query: 313 SYLYKIYRFEN 323
S N
Sbjct: 90 SDTLTGGEGNN 100
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 18/154 (11%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+Y GDD + G LN + N I + + G+ GN
Sbjct: 26 GNDIVYGDKGDDAI-----AGGDGKDKLNAG--------QGNDLIDGGADDDIIWGAKGN 72
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D ++G + N+ G+D G G + F + + I +
Sbjct: 73 DRILGEAGNDTLIGGKGSDTLTGGEGNNIFGIAIEGCGCQTITKADYITDFKNGSDILRL 132
Query: 338 LSDV-----ERLRFADQCIDSVNVKQRSILEYTA 366
L+ V + ++ ++ + EY A
Sbjct: 133 LNGVKYEDLNIFQGTGANSNNTIIRDKLTGEYMA 166
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 9/176 (5%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T S+ + G ++ ++ + V G G+D + G + GND+ DG + D
Sbjct: 6 TSSFDYLQGTVESDSLVAFEGNDIVYGDKGDDAIAGGDGKDKLNAGQGNDLIDGGADDDI 65
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILE 363
+ + + +I D L+ E A + + + +
Sbjct: 66 IWGAKGNDRILGEAGNDTLI----GGKGSDTLTGGEGNNIFGIAIEGCGCQTITKADYIT 121
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ D+++++ +E + F G + I D G Y + ++
Sbjct: 122 DFKNGSDILRLLNGVKYEDLNIFQGTGANSNNTIIRDKLT--GEYMAVLQGVNANT 175
Score = 37.8 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 5/86 (5%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
M I + + + G+ +D ++ N++ + G+D G G D + L
Sbjct: 1 MVINGTSSFDYLQGTVESDSLVAFEGNDIVYGDKGDDAIAGGDGKDKLNAGQGNDLIDGG 60
Query: 320 RFENAIIVYDANE-----HKQDFLSD 340
++ I N+ D L
Sbjct: 61 ADDDIIWGAKGNDRILGEAGNDTLIG 86
>gi|332835329|ref|XP_003312866.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-21-like
[Pan troglodytes]
Length = 569
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 45 TELNPN-AQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY- 98
++L+ + + A WS+V L F E + + DIK ++ PR
Sbjct: 187 SQLSAAEQRRIVALAFRMWSEVTPLEFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSG 246
Query: 99 --------FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + + G L A+HEIGH LGL+H Y G
Sbjct: 247 QEFAHAWRLGDIHFDDDEHFTPPTSDTGISLLKVAVHEIGHVLGLLHT--YRTG------ 298
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + +F SD A+QK+YG+
Sbjct: 299 -----------SIM---QPNYIPQEPAFE----LDWSDRKAIQKLYGS 328
>gi|261490798|ref|NP_001159780.1| stromelysin-1 [Sus scrofa]
gi|199652472|gb|ACH91677.1| matrix metallopeptidase 10 [Sus scrofa]
gi|199652494|gb|ACH91678.1| matrix metallopeptidase 10 [Sus scrofa]
Length = 477
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 48/148 (32%), Gaps = 23/148 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDI-- 79
W + Y+ T I AL W +V LTF + S +DI
Sbjct: 109 WRKNDLTYRIVNYTLDLPRSVI-------DSTIEKALKIWEEVTPLTFSKISEGEADIMI 161
Query: 80 KFISSNNGY-----------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F +G + E +FD + W G L A HE+
Sbjct: 162 TFAVREHGDFSPFDGPGKVLAHAYAPGPGIYGEAHFDDDEQWTKDT-SGVNLFLVAAHEL 220
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYEN 155
GH+LGL H N YPVY D
Sbjct: 221 GHSLGLFHSTDSNALMYPVYNPLTDLAR 248
>gi|297537910|ref|YP_003673679.1| outer membrane adhesin-like protein [Methylotenera sp. 301]
gi|297257257|gb|ADI29102.1| outer membrane adhesin like proteiin [Methylotenera sp. 301]
Length = 3158
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 16/140 (11%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL--LDLTLIGGVKNYIDLNTESWSSIGGYE 257
G LG++IY+I+ + T G D +D G N ++
Sbjct: 2900 GGLGDDIYRIDSAGD----VITENAGEGVDTVEIDAGYNVGTYNM---------NLVPNI 2946
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+N+ + ++ +V G++ ++ + GN NN+ +GND G G DT + +++
Sbjct: 2947 ENVLL-NGSLNSNVTGNAADNRITGNDGNNILDGGAGNDRLIGGKGNDTLIGGTGNDIFE 3005
Query: 318 IYRFENAIIVYDANEHKQDF 337
+ I + DF
Sbjct: 3006 WNLSDKGSIGIPNVDTITDF 3025
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S + G T+ + + + G G+D++IGN + GND +G G D
Sbjct: 2831 TGSVLDGDSAGNTLVGNEGRDYIQGFGGDDILIGNGGADYLDGGIGNDTLNGGDGNDILV 2890
Query: 309 YYAPSYL------YKIYRFENAI-IVYDANEHKQDFL 338
A + IYR ++A ++ + D +
Sbjct: 2891 GGAGNDTLIGGLGDDIYRIDSAGDVITENAGEGVDTV 2927
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 47/163 (28%), Gaps = 22/163 (13%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-------------- 242
AP + NN+ E + ++ GG+ L +
Sbjct: 2745 APTVRIYNNVEVSEAISGLTSIELLYWEQGGNANLTFDFKPSSSSTWVPFSLDSVAFFSN 2804
Query: 243 ---IDLNTESWSSIGGYEKN--MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
L I N I +V++ G S + ++GN + G+D+
Sbjct: 2805 STAPALTDTRIQDIVETSTNQQYEIRTGSVLD---GDSAGNTLVGNEGRDYIQGFGGDDI 2861
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G+ G D + + ++ N+ L D
Sbjct: 2862 LIGNGGADYLDGGIGNDTLNGGDGNDILVGGAGNDTLIGGLGD 2904
>gi|254410511|ref|ZP_05024290.1| Putative Ig domain family [Microcoleus chthonoplastes PCC 7420]
gi|196182717|gb|EDX77702.1| Putative Ig domain family [Microcoleus chthonoplastes PCC 7420]
Length = 2230
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 6/139 (4%)
Query: 225 SGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G+D LD + GG N + L + G N + + + G + ND
Sbjct: 2063 GDGNDYLDSGKGNDQVFGGNGNDMLLGNLGADFLRGGAGNDLLEAGEGNDILFGDADNDT 2122
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + +++ +G+D+ DG G D F + + + + +V+D ++ + FL
Sbjct: 2123 LTGGAGDDLIRGDTGDDLLDGGVGNDGLFGGSGADQFLLRMGAGMDMVFDFSDGEDSFLL 2182
Query: 340 DVERLRFADQCIDSVNVKQ 358
+ L FA I + +
Sbjct: 2183 S-DGLTFAQLTITASSFST 2200
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + + V G +GND+++GN + +GND+ + G D F A
Sbjct: 2060 LDGGDGNDYLDSGKGNDQVFGGNGNDMLLGNLGADFLRGGAGNDLLEAGEGNDILFGDAD 2119
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ A + D L
Sbjct: 2120 NDTLT----GGAGDDLIRGDTGDDLLDG 2143
>gi|149188919|ref|ZP_01867209.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
gi|148837339|gb|EDL54286.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
Length = 737
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + + GNDV+ G + N++ +GND +G G DT +
Sbjct: 364 TLNGGTGNDVLLGDNG-TNFHYQGGNDVLNGGAGNDILVGGAGNDTLNGGEGEDTAAFSG 422
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
Y ++ + D L ++E F+D
Sbjct: 423 SVIEYHF-MNRLTVVDKVSGRDGTDQLKEIENASFSDGTYAL 463
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 13/130 (10%)
Query: 264 QHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T I+ + G+S D + + N+V + ++GND DG G+DT + Y +
Sbjct: 245 YGTSIDDEIQGTSEGDRIDALAGNDVIYGAAGNDKIDGGEGIDTIGFSGSVLDYNFQTYG 304
Query: 323 N-AIIVYDANEHKQDFLSDVERLRFADQCID-----------SVNVKQRSILEYTASYED 370
+ +N D LS+ E+L F + + + +I+ ++
Sbjct: 305 FIKVTDTVSNRDGVDHLSNFEKLSFDEGTFTWMRGHNAGDNLTAHDGVDTIMVGMHGHDT 364
Query: 371 LIQVIGQDVF 380
L G DV
Sbjct: 365 LNGGTGNDVL 374
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 34/87 (39%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I ++V G GND++ GN ++ G+D+ G G D + +
Sbjct: 20 GGLGDDHILGKQGNDTVNGQRGNDILEGNRGDDKVNGEGGDDLIFGGVGNDIVSGGSGAD 79
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDV 341
++ + V E +D L V
Sbjct: 80 VFSMRILRGGDNVIKDFELGEDSLQLV 106
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 14/205 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
++ G ++ S+S IG + +AQ V +VG+ G+D + G +
Sbjct: 438 KVSGRDGTDQLKEIENASFSDGTYALKIGHNAYDNLVAQDGVDTLLVGADGDDKLTGGNG 497
Query: 286 NNVFFE--------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+V ++GND DG +G D + + A + A +
Sbjct: 498 NDVLIGDNSIDDTYNAGNDALDGGAGSDIILAGGGDDYIRADEYAPAHLAIHAESDVING 557
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
V+ L + D ++ ++ + + E T S + ++ +G I
Sbjct: 558 GDGVDTLWYNDTFKNADSLNVKVVDEDTFSVDTMLAGSVTSTDTVTSVEVLYGTRGDDVI 617
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAA 422
F + +Y+D + G D
Sbjct: 618 DFSGLGHGMTYNDKSSGAGQDEVTG 642
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 32/164 (19%)
Query: 204 NNIYKIEVQQKDS-PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + V D+ ++ +Y + GDD++D + +G Y D ++ +
Sbjct: 589 DTMLAGSVTSTDTVTSVEVLYGTRGDDVIDFSGLGHGMTYNDKSSGAGQD---------- 638
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
V GS ND++ + ++ + S+G D DG G D + A + +
Sbjct: 639 -------EVTGSDYNDIIKVMNGDDTVYASNGQDYVDGGHGQDKLVFDAATANIHVEANG 691
Query: 323 NAIIVY--------------DANEHKQDFLSDVERLRFADQCID 352
A + D + + +VE++ D ID
Sbjct: 692 PAYMQEYKVYDSSLVVNNDADIDNDIFTIVKNVEQVHGNDGYID 735
>gi|167648757|ref|YP_001686420.1| glycoside hydrolase family protein [Caulobacter sp. K31]
gi|167351187|gb|ABZ73922.1| glycoside hydrolase family 16 [Caulobacter sp. K31]
Length = 907
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 20/220 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T+ G+D D+ + + + + ++G +N+ +
Sbjct: 641 NDMLDGRGGGDTLVGGLGNDTYVVRDARDVLVEQANQGTDGVQSAVSWTLGANFENLALI 700
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
I + G+ ++ ++GN+ +N +GND+ G +G DT+ + L E
Sbjct: 701 GTASI-NATGNELDNRIMGNAGDNRIDGGAGNDLMIGGAGNDTYVIDSIRDLVTEKVGEG 759
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
V ++VE+L + L ++ L G D +
Sbjct: 760 YDTVESKVTWTLG--ANVEKLVLIGTAAIDGAGNADSNTLIGNSAANRLDGGAGNDRIDG 817
Query: 383 --MKHFYEFGLSEGRDITFDSYLYLGSY--DDLRNVFGSD 418
G D+++Y ++ D+ FG+
Sbjct: 818 GAGADQLWGGAGN------DTFVYTSTHFGKDVIKDFGTG 851
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 271 VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ +GN + +IGNSA N +GND DG +G D + A + +
Sbjct: 785 AIDGAGNADSNTLIGNSAANRLDGGAGNDRIDGGAGADQLWGGAGNDTFV------YTST 838
Query: 328 YDANEHKQDFLSDVERLRFA 347
+ + +DF + + L F+
Sbjct: 839 HFGKDVIKDFGTGFDVLEFS 858
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 33/228 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNYIDLNTESW 250
G+ + G+ + + GDD TL D+ +
Sbjct: 540 GSNRLEGGD---GNDTLDGAGGVKDVLIGGAGDDIYIVRTGKETLQEAASQGADVVQSAV 596
Query: 251 S-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S ++G +N+T+ I + G+ ++ +IGN+ N +GND+ DG G DT
Sbjct: 597 SWTLGANFENLTLTGSGAI-NGFGNDLDNSLIGNATANRLEGGAGNDMLDGRGGGDTLVG 655
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS---------DVERLRFADQCIDSVNVKQ-- 358
+ Y + + ++ + D + + E L + +
Sbjct: 656 GLGNDTYVVRDARD--VLVEQANQGTDGVQSAVSWTLGANFENLALIGTASINATGNELD 713
Query: 359 --------RSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
+ ++ A + +I G D V +S++ + EG D
Sbjct: 714 NRIMGNAGDNRIDGGAGNDLMIGGAGNDTYVIDSIRDLVTEKVGEGYD 761
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 13/126 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG-LDTFFYYAPSYLYKIYRFENAIIVY 328
+ VG+ ++ + GN+ +N GND DG+ G D A +Y + + +
Sbjct: 525 NGVGNLLDNKITGNAGSNRLEGGDGNDTLDGAGGVKDVLIGGAGDDIYIVRTGKE--TLQ 582
Query: 329 DANEHKQDFLS---------DVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQD 378
+A D + + E L + + L A+ L G D
Sbjct: 583 EAASQGADVVQSAVSWTLGANFENLTLTGSGAINGFGNDLDNSLIGNATANRLEGGAGND 642
Query: 379 VFESMK 384
+ +
Sbjct: 643 MLDGRG 648
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E+++ +GN +N +G+ +G G D A + ++ + + +
Sbjct: 90 GANVENLILEGNARFGLGNDLDNFISAGAGSQTLNGGKGNDVLTGGADADIFVVVKGNGS 149
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
V DF V+R++ + + S ++ + ++ + A
Sbjct: 150 DTV-------NDFQVGVDRIQLSQYGLTSFDMVKSAMTQKGAD 185
>gi|23011092|ref|ZP_00051562.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 796
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N IA + + G G+D++ G ++ G D DG +G+D +
Sbjct: 321 GNDAIAGGAGDDRIFGQMGDDLIYGEEGSDEIVGGLGRDTIDGGAGVDYILGDEGRIVRA 380
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
R +A++ D H+ L ++ + A + + L + DL+ +G
Sbjct: 381 YGRDGSAVLNSDGTWHRDVVLEEIGTVTAAIATDSQTGAARTADLAEKLAQADLVLAVGA 440
Query: 378 DVFESMKH 385
+
Sbjct: 441 RDGSGARL 448
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 68/207 (32%), Gaps = 30/207 (14%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIY-DSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+YG+ GN+I TIY DS LD+T + ID + S +
Sbjct: 597 LYGSNGVLAGNDIID------GGAGNDTIYGDSSETYTLDVTAYAALNGQIDKVSASLTD 650
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G S G D++ G + + + GND G +G D +
Sbjct: 651 LLGVF-------------ATLSRGVDLLQGGPSRTIAY---GNDTISGGTGDDFIVGDSA 694
Query: 313 SYLYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
I + + A DFLSD+ + + A+
Sbjct: 695 R---TIVQGSGPLRSLSAESALTLSDFLSDMRAVITDLAMTGRAAQASVTAKLEAAAQLP 751
Query: 371 LIQVIGQDVFESM--KHFYEFGLSEGR 395
L Q++ + ESM H G+ R
Sbjct: 752 LNQILAYGLPESMRTNHTLSIGIRHDR 778
Score = 40.9 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 61/202 (30%), Gaps = 44/202 (21%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQH 265
++ + I GG+D D+ G + D + + Y+ + + Q
Sbjct: 148 RLASTDPLAGGDDRIEAGGGND--DVAGGTGADVILGGDGHDVLFGDHMLYDLALPVNQR 205
Query: 266 TV--IESVVGSSGNDVVIGNSAN-------------------------NVFFESSGNDVF 298
V + GND + G + + NV + GND+
Sbjct: 206 AVSIFTAATDGGGNDTIEGGAGDDFLYGQQGDDQLSGGDGDDDITGSHNVLGGADGNDLI 265
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+G +G D + + + + N FAD + +V +
Sbjct: 266 NGGTGADVILGDNGVITRTVLVDDVKSVTWQRNPGV-----------FADTVM--RDVLR 312
Query: 359 RSILEYTASYEDLIQVIGQDVF 380
++++ + + G D
Sbjct: 313 FDLIDFVGGNDAIAGGAGDDRI 334
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 46/167 (27%), Gaps = 6/167 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ S TI GD+L+ L G + G + + V
Sbjct: 30 SVTTLDAASGAGDTIRAGDGDNLVFGALGGDTITTGTGSDAILGDHGRATFSGGVM--VV 87
Query: 268 IESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E++ + G+D ++ +N+ F G D +G D +
Sbjct: 88 LETIDPTAGGDDRIVAGDGDNLVFGGVGADRIVTGAGADMILGDNGRADLALV---GGRA 144
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
V +R+ D ++ ++ L
Sbjct: 145 VIRRLASTDPLAGGDDRIEAGGGNDDVAGGTGADVILGGDGHDVLFG 191
>gi|301792043|ref|XP_002930989.1| PREDICTED: matrix metalloproteinase-25-like [Ailuropoda
melanoleuca]
Length = 533
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 63/202 (31%), Gaps = 50/202 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELN-PNAQEVARWALGEWSKVVDLTFEET- 73
+ L W + ++ + L + + AL W L F+E
Sbjct: 101 YALSGSMWRKRTLTWRVRSFPQS------SALTRETVRTLMHHALATWGIESGLRFQELV 154
Query: 74 ---SIHSDIKFISSNNGYVCTPRYDSRYF--------------MEINFDKADVWRYGI-- 114
DI + + + +D + + +FD + W YG
Sbjct: 155 SQEPAEPDILIDFARAYHQDSYPFDGQGGTLAHAFFPGEHPISGDTHFDDEETWTYGSKD 214
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G+GT L A+HE GHALGL H + N S+M F
Sbjct: 215 GEGTDLFAVAVHEFGHALGLGHSSAPN-------------------SIMRPFYQGPVGDP 255
Query: 175 ASFGYCATPMVSDIVAVQKIYG 196
+ D +Q++YG
Sbjct: 256 DKYRLSQ----DDREGLQQLYG 273
>gi|220920528|ref|YP_002495829.1| glycerophosphoryl diester phosphodiesterase [Methylobacterium
nodulans ORS 2060]
gi|219945134|gb|ACL55526.1| glycerophosphoryl diester phosphodiesterase [Methylobacterium
nodulans ORS 2060]
Length = 2668
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 42/140 (30%), Gaps = 8/140 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + ++ +++ G +GND + G + + F +GND G +G D
Sbjct: 2358 LSGGEGDDSLTGSAGNDTIRGGAGNDTLKGFAGADQLFGQNGNDTVWGGAGNDFVSGGFG 2417
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL--------EY 364
+ ++ + D ++ + + +
Sbjct: 2418 ADSVSGDAGDDLVFSDDDDDVADGGAGNDRVYGGTGADLVFGAAGDDQVYGEWGNDFVSG 2477
Query: 365 TASYEDLIQVIGQDVFESMK 384
++ + G D
Sbjct: 2478 GEGHDFVSGGFGNDEVNGDA 2497
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 3/139 (2%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N+ ++ +S+ GS+GND + G + N+ +G D G +G DT + A +
Sbjct: 2354 GNLQLSGGEGDDSLTGSAGNDTIRGGAGNDTLKGFAGADQLFGQNGNDTVWGGAGNDFVS 2413
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+++ ++ D A ++ A + + G
Sbjct: 2414 GGFGADSVSGDAGDDLVFSDDDDDVADGGAGNDRVYGGTGA-DLVFGAAGDDQVYGEWGN 2472
Query: 378 D--VFESMKHFYEFGLSEG 394
D F G
Sbjct: 2473 DFVSGGEGHDFVSGGFGND 2491
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 39/129 (30%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + GG N + + G + + + + G +G D + G ++ F
Sbjct: 2517 DDRVYGGTGNDLVSGEAGADQVFGEQGEDVLLGGAGSDYLSGGAGADQLFGGEGADLLFG 2576
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
++G D G G D F + I F D ++ A +
Sbjct: 2577 NAGADALTGGLGSDAFAFGRGDGQDVIRDFVTGGAERDVIAFNNGAFGSFAAVQAALRQE 2636
Query: 352 DSVNVKQRS 360
S V
Sbjct: 2637 GSDAVIAYG 2645
Score = 42.0 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 54/193 (27%), Gaps = 36/193 (18%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGSSGNDVVI 281
G+D + GG + + G N ++ + G GND V
Sbjct: 2442 GAGNDRV----YGGTGADLVFGAAGDDQVYGEWGNDFVSGGEGHDFVS---GGFGNDEVN 2494
Query: 282 GNSAN------------------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G++ N + + +GND+ G +G D F
Sbjct: 2495 GDAGNDLLFGDDGDDAVSGGEGDDRVYGGTGNDLVSGEAGADQVFGEQGED----VLLGG 2550
Query: 324 AIIVYDANEHKQDFLSDVE--RLRF--ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
A Y + D L E L F A + + + +D+I+
Sbjct: 2551 AGSDYLSGGAGADQLFGGEGADLLFGNAGADALTGGLGSDAFAFGRGDGQDVIRDFVTGG 2610
Query: 380 FESMKHFYEFGLS 392
E + G
Sbjct: 2611 AERDVIAFNNGAF 2623
>gi|158335376|ref|YP_001516548.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158305617|gb|ABW27234.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 1296
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 92/264 (34%), Gaps = 31/264 (11%)
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
DS S M + ++ + TP I G L + I +
Sbjct: 1020 DSHNNSGMMQNLDTEAGKTYEISFAYTPRPGVAETSNPIEVYWNGELLDTITGASKTEAW 1079
Query: 216 SPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESV 271
+ T+ G+ L+ G S+GGY ++T+ T + +
Sbjct: 1080 KTYTYTVEAGEGETTALEFRAAGKDD-----------SLGGYLDDVTVFESVSATRNDLL 1128
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-----FENAII 326
G G+D+V+GN+ N+ + GND+ +G G DT A + + + ++
Sbjct: 1129 FGGEGDDIVLGNNGNDRLSGNQGNDILEGGFGNDTLIGGAGNDILVGVDPNAGFGQGSVD 1188
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
V + F+ + D S +++ + ED IQ+ G S +
Sbjct: 1189 VLTGGAGEDHFILGNAVAFYNDGDDQSAGTYDFAMITDFNTQEDKIQLAG-----SASDY 1243
Query: 387 YEFGLSEGRDITFDSYLYLGSYDD 410
++G ++ YL + D
Sbjct: 1244 VLGSTAQGVNL------YLDTNQD 1261
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ SGG + +L G + + E I G N + + + G G D+++G
Sbjct: 865 WVSGG--TGNDSLYGEAGHDVLSGDEGRDLIYGGTGNDVVLGGAGRDRLYGGEGEDIIVG 922
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + +G+D+ +G +G DT + + +
Sbjct: 923 NEGADRLYGDAGHDILNGGAGNDTIYGGTGNDIID 957
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 26/201 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYD----SGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G++ + DS + + +D G D ++ GG+ N E ++
Sbjct: 531 GGAGDDYWVSGGTGNDSLYGEAGHDVLSGGKGRDYIE----GGLDNDALFGDEGRDTLYA 586
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + + V G +G+DV+ G + N+ GNDV +G +G D A S
Sbjct: 587 GEGDDYAEGGAGRDLVDGGAGHDVLKGGTGNDTLLGQDGNDVLEGGAGHDELIGGAGSDG 646
Query: 316 YKIYRFENAIIVYDANEH---------------KQDFLSDVE---RLRFADQCIDSVNVK 357
+ N + +A + D L E L D + K
Sbjct: 647 WISGGTGNDSLYGEAGDDVLSGGKGRDYIEGGIGNDALFGNEGKDTLLAGDGEDYAEGGK 706
Query: 358 QRSILEYTASYEDLIQVIGQD 378
+++ A ++ L G D
Sbjct: 707 GSDLIDGGAGHDVLKGGTGND 727
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 7/180 (3%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y G+ +++Y + Y GG D +L G + + E ++
Sbjct: 319 YFVSGGTGNDSLYGEAGNDFLTGGKGRDYIEGGADNDNLQGNQGHDTLLGGDGEDYA--E 376
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + G SGND ++G +++ +G+D G SG D ++ +
Sbjct: 377 GGSGRDLVDGGAGHDHIKGGSGNDTLLGQDGHDILEGEAGHDELIGGSGDD-YWVSGGTG 435
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+Y ++ + +D+L F D+ D++ + DLI
Sbjct: 436 NDSLYGEAGDDVL--SGGKGRDYLEGGIGNDALFGDEGKDTLYAGEGEDYAEGGKGSDLI 493
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 55/182 (30%), Gaps = 15/182 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I GG D L D + GG N S+ G +
Sbjct: 181 NDTLLGQDGHDIIDGEGGHDELIGGAGNDYWVSGGAGND---------SLYGEAGEDYLT 231
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T + + G +GND + G+ ++ F G D +G +G D A K +
Sbjct: 232 GGTGNDYIEGGAGNDNLSGDQGHDTLFAGEGEDYAEGGTGNDLVDGGAGHDHIKGGSGND 291
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ D ++ + E + A L A + L G+D E
Sbjct: 292 TLLGQDGHDIIEGEAGHDELIGGAGDDYFVSGGTGNDSLYGEAGNDFLTGGKGRDYIEGG 351
Query: 384 KH 385
Sbjct: 352 AD 353
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 3/173 (1%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ +++Y S Y GG + L G L + G + +
Sbjct: 651 GTGNDSLYGEAGDDVLSGGKGRDYIEGGI--GNDALFGNEGKDTLLAGDGEDYAEGGKGS 708
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + + G +GND ++G +V +G+D G +G D ++ + +Y
Sbjct: 709 DLIDGGAGHDVLKGGTGNDTLLGQDGADVLEGEAGHDKLIGGAGDD-YWVSGGTGNDSLY 767
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ F D+ D++ + + DL+
Sbjct: 768 GEVGHDVLSGGRGRDYIEGGLDNDALFGDEGRDTLYAGEGDDYAEGGAGRDLV 820
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 4/175 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ ++Y G+D L G +YI+ + ++ G + + T+
Sbjct: 207 GNDYWVSGGAGNDSLYGEAGEDYL---TGGTGNDYIEGGAGND-NLSGDQGHDTLFAGEG 262
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ G +GND+V G + ++ SGND G G D A ++ +
Sbjct: 263 EDYAEGGTGNDLVDGGAGHDHIKGGSGNDTLLGQDGHDIIEGEAGHDELIGGAGDDYFVS 322
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + L L+ ++ L+ G+D E
Sbjct: 323 GGTGNDSLYGEAGNDFLTGGKGRDYIEGGADNDNLQGNQGHDTLLGGDGEDYAEG 377
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 2/188 (1%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y G+ +++Y + + Y GG +L+ G E ++
Sbjct: 210 YWVSGGAGNDSLYGEAGEDYLTGGTGNDYIEGGAGNDNLSGDQGHDTLFAGEGEDYAE-- 267
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + G SGND ++G +++ +G+D G +G D F
Sbjct: 268 GGTGNDLVDGGAGHDHIKGGSGNDTLLGQDGHDIIEGEAGHDELIGGAGDDYFVSGGTGN 327
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N + + +D + L+ + E + + +
Sbjct: 328 DSLYGEAGNDFLTGGKGRDYIEGGADNDNLQGNQGHDTLLGGDGEDYAEGGSGRDLVDGG 387
Query: 375 IGQDVFES 382
G D +
Sbjct: 388 AGHDHIKG 395
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 16/205 (7%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYD----SGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G++ + DS + + +D G D ++ GG+ N E ++
Sbjct: 749 GGAGDDYWVSGGTGNDSLYGEVGHDVLSGGRGRDYIE----GGLDNDALFGDEGRDTLYA 804
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + + V G +G+DV+ G + N+ G+D+ +G +G D A
Sbjct: 805 GEGDDYAEGGAGRDLVDGGAGHDVLKGGTGNDTLLGQDGHDILEGEAGHDKLIGGAGDD- 863
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLI- 372
+ E D LS E L + D V Y ED+I
Sbjct: 864 --YWVSGGTGNDSLYGEAGHDVLSGDEGRDLIYGGTGNDVVLGGAGRDRLYGGEGEDIIV 921
Query: 373 --QVIGQDVFESMKHFYEFGLSEGR 395
+ + ++ G
Sbjct: 922 GNEGADRLYGDAGHDILNGGAGNDT 946
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++ + DS + + +D D + GG N + L + G E
Sbjct: 858 GGAGDDYWVSGGTGNDSLYGEAGHDVLSGDEGRDLIYGGTGNDVVLGGAGRDRLYGGEGE 917
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + + + G +G+D++ G + N+ + +GND+ DG +
Sbjct: 918 DIIVGNEGADRLYGDAGHDILNGGAGNDTIYGGTGNDIIDGGA 960
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 40/128 (31%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G ++ TI +++VG G+D ++ + GND DG + D +
Sbjct: 14 GSLEDDTILGDLGNDNLVGDKGDDTLLAGEGEDYAEGGQGNDFVDGGANHDHLKGGSGHD 73
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + N+ D + Q ++ A ++ L
Sbjct: 74 TLLGQDGHDVLEGGNGNDKLVGGAGDDYWMSGGAGNDSLYGEGQNDVMSGGAGHDYLSGG 133
Query: 375 IGQDVFES 382
G D
Sbjct: 134 TGNDNLSG 141
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 46/170 (27%), Gaps = 12/170 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + D + + I L ++ G + + T+ + G GND V G + +
Sbjct: 5 GTENDDFLVGSLEDDTI-LGDLGNDNLVGDKGDDTLLAGEGEDYAEGGQGNDFVDGGANH 63
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ SG+D G G D + + + D L
Sbjct: 64 DHLKGGSGHDTLLGQDGHDVLEGGNGNDK---LVGGAGDDYWMSGGAGNDSLYG------ 114
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
Q L ++L G D + + G
Sbjct: 115 EGQNDVMSGGAGHDYLSGGTGNDNLSGDQGNDSLYGGENEDYANGGQGND 164
>gi|33866882|ref|NP_898441.1| hypothetical protein SYNW2352 [Synechococcus sp. WH 8102]
gi|33639483|emb|CAE08867.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 628
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
RY + A HE GHALGL HP + G +D + +VMSY QD
Sbjct: 397 RYAGSREAGWKSTAFHEFGHALGLEHPHDDSDGDVDADIDTNG-------TVMSYVKEQD 449
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D + DI A+Q +YG+ G
Sbjct: 450 ADGDPGYT------DLDIRALQFVYGSESG 473
>gi|17227771|ref|NP_484319.1| glycerophosphoryl diester phosphodiesterase [Nostoc sp. PCC 7120]
gi|17135253|dbj|BAB77799.1| glycerophosphoryl diester phosphodiesterase [Nostoc sp. PCC 7120]
Length = 1027
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 53/197 (26%), Gaps = 49/197 (24%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-- 265
DSP TI GDD + + + N + + + N T
Sbjct: 793 GDGADTVDSPGNNTISTGNGDDTV-FVGSNASVSTGNGNDQVFIGVDSPASNTTANGGHG 851
Query: 266 ----TVIES------------------------VVGSSGNDVVIGNSANNVFFESSG--- 294
TVIE+ G SGND + N + N SG
Sbjct: 852 DDEITVIEAGGSNNLFGAAGNDTLQVIEGSRQFAFGGSGNDTLTSNGSYNRLNGGSGDDK 911
Query: 295 -----NDVFDGSSGLDTFFYY--------APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
ND G G D F + + + + + + DF V
Sbjct: 912 LFSSVNDSLFGGDGDDVLFAGQAGSNRLTGGAGADQFWIANGS--LPTSKNTVTDFAVGV 969
Query: 342 ERLRFADQCIDSVNVKQ 358
+++ + +
Sbjct: 970 DKIGLGGVGVTQFSALS 986
>gi|294788141|ref|ZP_06753384.1| type I secretion target repeat protein [Simonsiella muelleri ATCC
29453]
gi|294483572|gb|EFG31256.1| type I secretion target repeat protein [Simonsiella muelleri ATCC
29453]
Length = 925
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 15/186 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYI-----DLNTESWSS-IGGYEKN 259
+ + T+Y GDD L D G N + L + + + G +
Sbjct: 507 DDNDELIGNGGNDTLYGDDGDDTLFGDGANDGTRNNPLISGKDTLYGGNGNDYLDGGRDD 566
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + ++++G GND + GN ++ + + G+D+ G +G D A L +
Sbjct: 567 DALYGGSGKDTLIGGMGNDSLYGNEEDDELYGNEGDDIIFGGTGNDVIHGDADEALITDW 626
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFAD-------QCIDSVNVKQRSILEYTASYEDLI 372
++ + + D + +N + + L
Sbjct: 627 NQSFNDTLHGNAGDDVMVGGSGNNIMYGDDGNDRLWGGMSELNGDNTFVTPHIIGNNTLY 686
Query: 373 QVIGQD 378
G D
Sbjct: 687 GGNGDD 692
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 27/227 (11%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGG 238
M DI ++G NI + + +Y G+D L D L GG
Sbjct: 396 MGDDI-----LWGDSNQFSNENI----TTEPELIGNDFLYGEEGNDTLIGGLGDDFLSGG 446
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS------ANNVFFES 292
I + E + G + + + +S+ G G+D+++G+ ++
Sbjct: 447 TGADILIGNEGSDILSGDDGDDKLYGQLGSDSLFGGKGHDLLVGDDDSATAHFDDTLNGG 506
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
ND G+ G DT + N + +D L + D D
Sbjct: 507 DDNDELIGNGGNDTLYGDDGDDTL-FGDGANDGTRNNPLISGKDTLYGGNGNDYLDGGRD 565
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
L + + LI +G D + E +EG DI F
Sbjct: 566 D------DALYGGSGKDTLIGGMGNDSLYGNEEDDELYGNEGDDIIF 606
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 47/142 (33%), Gaps = 4/142 (2%)
Query: 199 KGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IG 254
K + +Y + + +Y GDD+L I E + +
Sbjct: 367 KYHGNDTLYGRAGKDQLVGQGGDDILYGGMGDDILWGDSNQFSNENITTEPELIGNDFLY 426
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N T+ + + G +G D++IGN +++ G+D G G D+ F
Sbjct: 427 GEEGNDTLIGGLGDDFLSGGTGADILIGNEGSDILSGDDGDDKLYGQLGSDSLFGGKGHD 486
Query: 315 LYKIYRFENAIIVYDANEHKQD 336
L D D
Sbjct: 487 LLVGDDDSATAHFDDTLNGGDD 508
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 57/179 (31%), Gaps = 15/179 (8%)
Query: 200 GSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ G+++ ++ GG L+ + I NT + G
Sbjct: 636 GNAGDDVMVGGSGNNIMYGDDGNDRLW--GGMSELNGDNTFVTPHIIGNNT-----LYGG 688
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + + + G G+D + G ++ F +G D G G D S Y
Sbjct: 689 NGDDYLFGNVGKDMLYGDDGSDNLYGMDGDDQLFGGAGVDYLHGGKGNDYLNGGLDSDYY 748
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-----IDSVNVKQRSILEYTASYED 370
+ + + D L + L + + + ++ YT + +D
Sbjct: 749 YYHHGDGITTIEDLQGQSIISLDSLSHLSINPTAKGLVIYNGIAGDELHLIGYTFNSDD 807
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+N ++ I + N +I + +++ G GNDV+ G +++ F G D G G
Sbjct: 126 VNEADFNDIIQSDNNDSIIKGLGGHDALSGGQGNDVIEGGDGSDMLFGGGGQDKIRGGDG 185
Query: 304 LD 305
D
Sbjct: 186 ND 187
Score = 38.2 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 49/151 (32%), Gaps = 33/151 (21%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N++ E I GDD + +YI + S E + I
Sbjct: 245 NDVAGDE-----------IMGGNGDDTI---FGSNHDDYIHGDGYHLS-----EDGLNIV 285
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGN--------DVFDGSSGLDTFFYYAPSYL 315
T + ++G GND + G ++V + +GN DV G G D + +
Sbjct: 286 YETGKDLLIGKGGNDRIHGGLDDDVIWGDAGNAAPQDNGIDVLFGDDGNDRIYGNGNDDI 345
Query: 316 YKIYRFENAIIV------YDANEHKQDFLSD 340
++ + DA H D L
Sbjct: 346 LDGGDGDDKLYGDELVKGLDAKYHGNDTLYG 376
>gi|257791794|ref|YP_003182400.1| hypothetical protein Elen_2047 [Eggerthella lenta DSM 2243]
gi|257475691|gb|ACV56011.1| hypothetical protein Elen_2047 [Eggerthella lenta DSM 2243]
Length = 404
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 392 SEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS 448
EG D + F+ YL +DL + + + +H+I HG +E R F Y+
Sbjct: 269 YEGIDYSKVFEYRFYLTHNEDLAKAYSDNPQESLQHFIVHGAREKRMAHPCFSVASYMQG 328
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
H +L + D P H+ + E ++
Sbjct: 329 HPELKPEYGDDPLAYVS---HYLSTPSERNHATGYE 361
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLR 412
K Y EDL + + ES++HF G E R F Y+ + +L+
Sbjct: 274 YSKVFEYRFYLTHNEDLAKAYSDNPQESLQHFIVHGAREKRMAHPCFSVASYMQGHPELK 333
Query: 413 NVFGSDRGAAARHYI 427
+G D A HY+
Sbjct: 334 PEYGDDPLAYVSHYL 348
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F+ Y+ +EDL A++D P Q HF G E R F Y+ + +L+
Sbjct: 278 FEYRFYLTHNEDLAKAYSDNP---QESLQHFIVHGAREKRMAHPCFSVASYMQGHPELKP 334
Query: 498 VFGSDRGAAARHYIT 512
+G D A HY++
Sbjct: 335 EYGDDPLAYVSHYLS 349
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
F+ YL +DL + + + +H+I HG +E R F Y+ H +L +
Sbjct: 278 FEYRFYLTHNEDLAKAYSDNPQESLQHFIVHGAREKRMAHPCFSVASYMQGHPELKPEYG 337
Query: 542 DAPDLVQAGKDHFS 555
D P A H+
Sbjct: 338 DDP---LAYVSHYL 348
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 10/150 (6%)
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-ADAPDL 546
YL D + VFG Y+ E + D + + H D + P L
Sbjct: 199 YLDRDDYQKRVFGFLAERLMNVYL-----EAKGIDVVEYPIFDPIHPDDSSVLPLKKPPL 253
Query: 547 VQA--GKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
V++ G + + EG + F YLT +DL + + + QH+I HG +E
Sbjct: 254 VRSDVGLSYPTIQPVYEGIDYSKVFEYRFYLTHNEDLAKAYSDNPQESLQHFIVHGAREK 313
Query: 603 RALGISGMQFKSVMNLSEKSRDKADLSLSF 632
R + E + D L++
Sbjct: 314 RMAHPCFSVASYMQGHPELKPEYGDDPLAY 343
>gi|197283919|ref|YP_002149791.1| RTX family protein [Proteus mirabilis HI4320]
gi|194681406|emb|CAR40244.1| RTX-family protein [Proteus mirabilis HI4320]
Length = 2776
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 86/280 (30%), Gaps = 64/280 (22%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVA----VQKIYGAPKGS------LGNNIYKIEVQQK 214
YF P S + Y T DI+A Q I+ G+ ++ + + +
Sbjct: 1975 YFEP--SWRENELFYFNTYNGDDIIAAPLITQNIFDVHNGTKRLSGGEKDDTFNV-FTSE 2031
Query: 215 DSPFIQTIYDSGGDDLLDLTLI---------GGVKNYIDLNTESWSSIG----------- 254
+ Y G+D L + KNYI S
Sbjct: 2032 SPRYASRFYGREGNDTLRIIQTEKKYIGYEVNLSKNYIKFIGGENKSNSQSFHARLFIFQ 2091
Query: 255 -----------------GYEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGND 296
++ IA IE+VVGS GND++ G+ NN G D
Sbjct: 2092 EQGQIYTHKLADTMPNITLQRQPVIAYLESIENVVGSEIGNDIIYGDQKNNYLNGMGGVD 2151
Query: 297 VFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G +G DT A + Y I R N D N + + + D E +
Sbjct: 2152 SLYGLAGDDTLVLREGYAQGGAGNDSYTILRASN----TDNNVKQLETIIDEETHT--EA 2205
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ +N I + D++ + + F E
Sbjct: 2206 SLIQLNYTFDEIAAISRRETDIVFTLKVGNDKDPDQFIEH 2245
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---------YYAPSYLYKIYRF 321
+ G G+D ++ N +++ GND +G SG D F + + +Y + +
Sbjct: 2603 IDGGKGDDHIVVNEGHHILIAGEGNDNLNGGSGHDLFISTSGNDYLGGGSGNNVYVVQKR 2662
Query: 322 ENAIIVYDANEHKQDFLSD 340
+ VYD E F+S
Sbjct: 2663 HGEVTVYDEGEMSHIFVSG 2681
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S S I G + + I + ++ GND + G S +++F +SGND G SG + +
Sbjct: 2599 SSSVIDGGKGDDHIVVNEGHHILIAGEGNDNLNGGSGHDLFISTSGNDYLGGGSGNNVYV 2658
Query: 309 YYAPSYLYKIYRFENAIIVYDAN 331
+Y ++ +
Sbjct: 2659 VQKRHGEVTVYDEGEMSHIFVSG 2681
>gi|296479001|gb|DAA21116.1| matrix metalloproteinase 23B precursor [Bos taurus]
Length = 393
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 32/142 (22%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDI 79
W ++ + YK + LS + + +A A WS V +F E + SD+
Sbjct: 90 RWEHFNLTYKILSFPRNLLSP-----SETRRGLA-AAFRMWSDVSPFSFREVAPEQPSDL 143
Query: 80 KFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG------ 117
+ + T +F I+FD ++ W G +
Sbjct: 144 RIGFYPVNHTDCLVSPLHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGV 203
Query: 118 --TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 204 WLTDLVHVAAHEIGHALGLMHS 225
>gi|220903557|ref|YP_002478869.1| outer membrane adhesin-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867856|gb|ACL48191.1| outer membrane adhesin like proteiin [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 3091
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 17/182 (9%)
Query: 216 SPFIQTIYDS-GGDDL------LDLTLIGG-----VKNYIDLNTESWSSIGGYEKNMTIA 263
F T+ D+ GG+D + T G I N S + G N ++
Sbjct: 2869 DSFGYTVSDNRGGNDSSSIDVGITFTAGSGNADATENQLIFGNNGSD-DLHGGAGNDILS 2927
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +G+D + G + N+ GN+ G G D ++ I
Sbjct: 2928 GGAGDDHLYGGAGDDYLFGGAGNDFLDGGEGNNHLYGGDGNDVLVFHQGD---TIDGGAG 2984
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I+ +++ + D + V + L S D D +
Sbjct: 2985 TDILLVSDKEGEGLNID-DLFTNTSGIEVVVTGADVNSLTNMGSLADKGITFNADNQVVL 3043
Query: 384 KH 385
H
Sbjct: 3044 DH 3045
>gi|325983141|ref|YP_004295543.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
gi|325532660|gb|ADZ27381.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
Length = 1176
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 20/153 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLD---------LTLIGGVKNYIDLNTE 248
G+ GN+ +++ + S +YD G G D + L GV N I+ T
Sbjct: 190 NGAAGNDTFQVSGSGEGSD----VYDGGDGSDTIKALSDGTLIQLAGDFGVDNNIETITA 245
Query: 249 ----SWSSIGGYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + +G N T ++ V G SGNDV+IGN+ +N +GND +G++
Sbjct: 246 DGKANVTVLGDSGNNTLDFTSTTLDGVVVNGGSGNDVIIGNAFDNTIRGGAGNDTLNGAA 305
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G DTF +Y + A
Sbjct: 306 GNDTFQVSGSGEGSDVYDGGDGSDTIKALSDGT 338
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 20/153 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLD---------LTLIGGVKNYIDLNTE 248
G+ GN+ +++ + S +YD G G D + L GV N I+ T
Sbjct: 302 NGAAGNDTFQVSGSGEGSD----VYDGGDGSDTIKALSDGTLIQLAGDFGVDNNIETITA 357
Query: 249 ----SWSSIGGYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + G N T ++ V G SGNDV+ GN+ +N +GND +G++
Sbjct: 358 DGKANVTVFGDSGNNTLDFTSTTLDGVVVNGGSGNDVITGNAFDNTIRGGAGNDTLNGAA 417
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G DTF +Y A
Sbjct: 418 GNDTFQVSGSGEGSDVYNGGTGSDTIKALSDGT 450
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 57/156 (36%), Gaps = 16/156 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLD---------LTLIGGVKNYIDL 245
GA +L + S +YD G G D + L GV N I+
Sbjct: 71 GAGNDTLTGSTLDDTFLVSGSGEGSDVYDGGDGSDTIKALSDGTLIQLAGDFGVDNNIET 130
Query: 246 NTE----SWSSIGGYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
T + + +G N T ++ V G SGND++ GN+ +N +GND +
Sbjct: 131 ITADGKANVTVLGDSGNNTLDFTSTTLDGVVVNGGSGNDIITGNAFDNTIRGGAGNDTLN 190
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G++G DTF +Y + A
Sbjct: 191 GAAGNDTFQVSGSGEGSDVYDGGDGSDTIKALSDGT 226
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 56/152 (36%), Gaps = 18/152 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD---------LTLIGGVKNYIDLNTE- 248
G+ GN+ +++ + S G D + L GV N I+ T
Sbjct: 414 NGAAGNDTFQVSGSGEGSDVYN---GGTGSDTIKALSDGTLIQLAGDFGVDNNIETITAD 470
Query: 249 ---SWSSIGGYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + +G N T ++ V G SGND++ GN+ +N +GND +G++G
Sbjct: 471 GKANVTVLGDSGNNTLDFTSTTLDGVVVNGGSGNDIITGNAFDNTIRGGAGNDTLNGAAG 530
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
DTF +Y A
Sbjct: 531 NDTFQVSGSGEGSDVYNGGTGSDTITALSDGT 562
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 12/149 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFI------QTIYDSGGDDLLDLTLIGGVKNYIDLNTE---- 248
G+ GN+ +++ + S TI L+ L GV N I+ T
Sbjct: 526 NGAAGNDTFQVSGSGEGSDVYNGGTGSDTITALSDGTLIQLAGDFGVDNNIETITADGKA 585
Query: 249 SWSSIGGYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G N T ++ V G SGNDV+ GN+ +N +GND +G++G DT
Sbjct: 586 NVTVFGDSGNNTLDFTSTTLDGVVVNGGSGNDVITGNAFDNTIRGGAGNDTLNGAAGNDT 645
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
F +Y A +
Sbjct: 646 FQVSGSGEGSDVYNGGTGSDTITALSNGT 674
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T IE + G SGND + GN NN +G+D +G++G DTF +
Sbjct: 952 TSIEEINGGSGNDTITGNGGNNTIHGGAGDDELNGAAGDDTFTVNGSGEGLDTVNGGDG 1010
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 203 GNNIYKIEVQQKDSPFI------QTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIGG 255
GN+ + I + + T G D ++ + +G + + ++N +
Sbjct: 763 GNDTFTINGSGEGLDTVNGGLGNDTWLGLGNHDTFNVISGLGNLTSVENINGGGGNDRIL 822
Query: 256 YEKNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
I T IE + G SGND + GN NN +G+D +G++G DTF
Sbjct: 823 ATAGDDILDFTNGPTLTSIEEINGGSGNDTITGNGGNNTIHGGAGDDALNGAAGDDTFTV 882
Query: 310 YAP 312
Sbjct: 883 NGS 885
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 65/195 (33%), Gaps = 13/195 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFI------QTIYDSGGDDLLDLTLIGGVKNYIDLNTE---- 248
G+ GN+ +++ + S TI L+ L G N I+ T
Sbjct: 638 NGAAGNDTFQVSGSGEGSDVYNGGTGSDTITALSNGTLIQLVGNFGASNSIETITADGKA 697
Query: 249 SWSSIGGYEKNMTIAQHTVIESVV--GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + +G N T + VV G SGND + GNS N G D GS+G D
Sbjct: 698 NVTVLGDSASNTLNFSGTALVDVVVNGGSGNDAITGNSQINTLRGGEGADTIHGSAGNDA 757
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + + I + + +L F N+ +
Sbjct: 758 LFGDNGNDTFTINGSGEGLDTVNGGLGNDTWLGLGNHDTFNVISG-LGNLTSVENINGGG 816
Query: 367 SYEDLIQVIGQDVFE 381
+ ++ G D+ +
Sbjct: 817 GNDRILATAGDDILD 831
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 22/198 (11%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--SWSSIGGYE 257
+ G++I I+ I G+D + G N I + G +
Sbjct: 936 ATAGDDILDFT-NGPTLTSIEEINGGSGNDTI---TGNGGNNTIHGGAGDDELNGAAGDD 991
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---------------ESSGNDVFDGSS 302
+++V G G+D +G ++ F GND ++
Sbjct: 992 TFTVNGSGEGLDTVNGGDGDDTWLGLGNHDTFNVISGLGNLTSVENINGGGGNDRILATA 1051
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D + L I N D + ++ D + + + Q +IL
Sbjct: 1052 GDDILDFTNGPTLTSIEEI-NGGSGNDTITVSNAWATNYRGSAGNDTFVVTTSSAQSTIL 1110
Query: 363 EYTASYEDLIQVIGQDVF 380
++ S +D+I + +
Sbjct: 1111 DFDDSGDDVINLSNFGLT 1128
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 65/224 (29%), Gaps = 55/224 (24%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A G+ + + + G D +DL+ + I +
Sbjct: 18 ADNGADFDVTLNGNTTGPFADDTIIVNGGSGSDTVDLSALTSASGVISVT---------- 67
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---ESSGNDVFDGSSGLDTFFYYAPS 313
V G +GND + G++ ++ F G+DV+DG G DT A S
Sbjct: 68 --------------VSGGAGNDTLTGSTLDDTFLVSGSGEGSDVYDGGDGSDTI--KALS 111
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDV--------ERLRFADQCID------------S 353
I + + + D ++V L F +D
Sbjct: 112 DGTLIQLAGDFGVDNNIETITADGKANVTVLGDSGNNTLDFTSTTLDGVVVNGGSGNDII 171
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + A + L G D F G EG D+
Sbjct: 172 TGNAFDNTIRGGAGNDTLNGAAGNDT------FQVSGSGEGSDV 209
>gi|218675222|ref|ZP_03524891.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Rhizobium etli GR56]
Length = 971
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/354 (15%), Positives = 104/354 (29%), Gaps = 40/354 (11%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN 103
ITEL + R AL +S + E + F + N T + +
Sbjct: 474 ITELVSAGTDEIRTALAAYSIAALVNVENLTYTGSANFAGTGNALANTITGGAGNDVLNG 533
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
AD G+G + + + D D+ T++
Sbjct: 534 GIGADSLIGGVGDDAYIV-------------------DDAGDLVTEAADAGTDTIWTTLA 574
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
+Y + D FG A + +A GA +L + +
Sbjct: 575 AYTLGTDVENLTYFGKAAFAGTGNDLANMITGGAAADTLSGGV--GNDTLNGGGGADRLI 632
Query: 224 DSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV----VGSSGN 277
GDD D + + +++ + I T I + +G+S +
Sbjct: 633 GGTGDDTYIVDHAGDLVTEVTNEGIDTVRTTLAAHTLAANIENLTYISTAAFVGIGNSLD 692
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ + G +A + GND +G +G D Y + + +V +A + D
Sbjct: 693 NTITGGAAADTLSGGDGNDTLNGGAGADRLIGGTGDDAYVVDIAGD--LVTEAADAGTDT 750
Query: 338 LS----------DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +VE L + + + A + L G D
Sbjct: 751 VRTTLAGYTLGNNVENLTYTGSASFSGAGNALANTITGGAGNDVLNGGAGADSL 804
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 13/120 (10%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G+S ++ + G +A + GND +G +G D Y + + +V +A
Sbjct: 84 IGNSLDNTITGGAAADTLSGGDGNDTLNGGAGADRLIGGTGDDAYVVDIAGD--LVTEAA 141
Query: 332 EHKQDFLS----------DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D + +VE L + + + A + L G D
Sbjct: 142 DAGTDTVRTTLAGYTLGNNVENLTYTGSASFSGAGNALANTITGGAGNDVLNGGAGADSL 201
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 89/241 (36%), Gaps = 18/241 (7%)
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
D D+ T++ Y + +++ + ++ A+ + I G + N +
Sbjct: 141 ADAGTDTVRTTLAGYTLG-NNVENLTYTGSASFSGAGNALANTITGGAGNDVLNGGAGAD 199
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ I D+ GD + + G +L + + + G +N++ T +
Sbjct: 200 SLIGGTGHDTYIVDNAGDIVTEAADAGTDTVRTNLASYTLT---GNVENLSFV-GTGAFA 255
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G++ ++ + G +A + +GND DG +G DT Y + + +V +A
Sbjct: 256 GTGNNLDNTITGGAAIDTLSGDAGNDTLDGGAGADTLIGGEGDDTYVVDHAGD--LVAEA 313
Query: 331 NEHKQDFL----------SDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDV 379
+ D + SDVE L + + + + + A + L G D+
Sbjct: 314 ADEGTDTVRTALASYTLGSDVENLTYIGKAALAGTGNSLANTITGGAGADTLDGNAGADM 373
Query: 380 F 380
Sbjct: 374 L 374
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 26/187 (13%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + G+D + +G G+ DL + SS
Sbjct: 363 DTLDGNAGADMLIGGAGNDTYIVDNVGDVVTEGLNAGTDLIKTALSSYT---------LG 413
Query: 266 TVIESVVGSSGNDVV-IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-------- 316
+E+++ + + GN+ N +G+DV DG +G D +Y
Sbjct: 414 NNVENLLYTGSASFIGTGNALANTIIGGAGSDVLDGGAGNDRLDGGVGDDVYIVDSASDV 473
Query: 317 --KIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQ 373
++ I + L +VE L + + + A + L
Sbjct: 474 ITELVSAGTDEIRTALAAYSIAALVNVENLTYTGSANFAGTGNALANTITGGAGNDVLNG 533
Query: 374 VIGQDVF 380
IG D
Sbjct: 534 GIGADSL 540
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ N+V++G S +N +GND+ G + D F Y A I F A +DA
Sbjct: 861 GNALNNVIVGGSGSNTLTGGAGNDILTGGAAADIFAYSANWGHDTITNFVAAGFAHDAIS 920
Query: 333 HKQDFLSDVERLRFA 347
+D E L A
Sbjct: 921 IDHGIFADWESLFAA 935
>gi|11560008|ref|NP_071557.1| neutrophil collagenase precursor [Rattus norvegicus]
gi|5921827|sp|O88766|MMP8_RAT RecName: Full=Neutrophil collagenase; AltName: Full=Matrix
metalloproteinase-8; Short=MMP-8; Flags: Precursor
gi|3242321|emb|CAA07432.1| collagenase [Rattus norvegicus]
Length = 466
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 65/214 (30%), Gaps = 51/214 (23%)
Query: 5 KPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP D LL W++ + Y+ T ++ + A W
Sbjct: 89 KPRCGVPDSGDFLLTPGSPKWTHTNLTYRIINHTPQMSKAEV-------KTEIEKAFKIW 141
Query: 63 SKVVDLTFEETSIH-SDIKFIS-----SNNGYVCTPRY--------DSRYFMEINFDKAD 108
S LTF ET +DI +N P + +FD +
Sbjct: 142 SVPSTLTFTETLEGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAHFDSEE 201
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFM 167
W K L A HE GH+LGL H YP Y Y S +Y +
Sbjct: 202 TWT-QDSKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYA----YREPS------TYSL 250
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
PQD DI +Q IYG
Sbjct: 251 PQD----------------DINGIQTIYGPSDNP 268
>gi|331284133|ref|NP_001193566.1| stromelysin-1 [Bos taurus]
Length = 477
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 59/197 (29%), Gaps = 48/197 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T AL W + LTF +DI
Sbjct: 109 WRKTHLTYRIVNYTKDLPR-------DAVDSAIEKALTVWEEATPLTFSRIYEGEADIMI 161
Query: 82 IS-----------SNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
I G V Y S ++ + +FD + W G L A HE+
Sbjct: 162 IFAIREHGDFLPFDGPGKVLAHAYPPGSGFYGDAHFDDDEQWTKDT-SGINLFLVAAHEL 220
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YPVY D F S D
Sbjct: 221 GHSLGLQHSTEREALMYPVYDPRTDLTR--FRLS-----------------------QDD 255
Query: 188 IVAVQKIYGAPKGSLGN 204
+ +Q +YG+P S +
Sbjct: 256 VDGIQFLYGSPPVSPND 272
>gi|242035087|ref|XP_002464938.1| hypothetical protein SORBIDRAFT_01g029150 [Sorghum bicolor]
gi|241918792|gb|EER91936.1| hypothetical protein SORBIDRAFT_01g029150 [Sorghum bicolor]
Length = 371
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 63/183 (34%), Gaps = 43/183 (23%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH--SDIK--FISSNNG----YVCTPRYDSRYFMEIN 103
+ V R A W++V+ + F ET + +DI+ F ++G + F N
Sbjct: 193 RAVFRRAFARWARVIPVGFVETDDYQEADIRVGFYVGSHGDGIPFDGPLGVLGHAFSPKN 252
Query: 104 F----DKADVWRYGIGKGT-----ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
D A+ W + T L A HEIGH LGL H S
Sbjct: 253 GRLHLDAAERWAVDMDTETVHSAVDLESVATHEIGHVLGLGHSSSPKA------------ 300
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
VM Y A V DI VQ +YG G +++Y+ +
Sbjct: 301 -------VM-YPSLSPRQKKAELT------VDDIEGVQWLYGPNPGFSLSSLYQQDSSMG 346
Query: 215 DSP 217
+
Sbjct: 347 SAR 349
>gi|209525687|ref|ZP_03274224.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209493856|gb|EDZ94174.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 303
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 7/190 (3%)
Query: 201 SLGNNIYKIEVQQKDSPFIQ--TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+LGN + + T+ DS G+ + G I + S+ G
Sbjct: 44 NLGNGTSDFGETLSSNGSVNEITVTDSAGE---TVRGTGAADRIIGGDGPD--SLLGGSN 98
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI ++++G +GND++ GN ++ + +GND G DT + A L
Sbjct: 99 NDTIYGKAGSDTLLGEAGNDLLFGNQGRDLLYGGNGNDTLYGGQEADTLYGEAGDDLLFG 158
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D N+ +D + S + +++ ++ +
Sbjct: 159 NLANDWLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSFVVSSLSGG 218
Query: 379 VFESMKHFYE 388
V
Sbjct: 219 VNIREADVIM 228
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 7/156 (4%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GS + IY ++ + G DLL GG N + ++ G
Sbjct: 96 GSNNDTIYGKAGSDTLLGEAGNDLLFGNQGRDLL----YGGNGNDTLYGGQEADTLYGEA 151
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + + + + G GND + G +++ + GND+ G +G DT +
Sbjct: 152 GDDLLFGNLANDWLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSFV 211
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+ + + +A + D+ +++ +
Sbjct: 212 VSSLSGGVNIREA-DVIMDYTRSDDQILLTGGLRST 246
>gi|158339293|ref|YP_001520470.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158309534|gb|ABW31151.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 378
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 13/176 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ +Y F Q + Y GG+D L GG N + ++ G + N ++
Sbjct: 68 DTLYGGSGNDSLYGFSQGLTYHQGGNDYLS----GGAGNDLLKGGNGNDTLYGGDHNDSL 123
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T + + G G+D++ G S N+ G D G SG D + + + + F
Sbjct: 124 YGGTGNDELRGDKGDDLLYGESGNDTLSGGFGEDSLYGGSGNDFLYGVSGND----FLFG 179
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+D L + D D L + + G D
Sbjct: 180 GIGNDSLYGSDGEDLLYGEDGHDILDGGWDYH----ADYLYGGRGNDRMWGRYGND 231
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 4/125 (3%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G GND + G + + SGND+ +G + DT + + + +Y F + +
Sbjct: 35 YGYGGNDTLRGGRDEDTLYGGSGNDLLEGGADEDTLYGGSGND--SLYGFSQGLTYHQGG 92
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEF 389
+ + L+ + L ++L G D+ ES
Sbjct: 93 NDYLSGGAGNDLLKGGNGNDTLYGGDHNDSLYGGTGNDELRGDKGDDLLYGESGNDTLSG 152
Query: 390 GLSEG 394
G E
Sbjct: 153 GFGED 157
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 15/141 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS--------SGL 304
+ GY N T+ +++ G SGND++ G + + + SGND G G
Sbjct: 34 MYGYGGNDTLRGGRDEDTLYGGSGNDLLEGGADEDTLYGGSGNDSLYGFSQGLTYHQGGN 93
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEH-----KQDFLSD--VERLRFADQCIDSVNVK 357
D A + L K + + D N+ D L + L + + D+++
Sbjct: 94 DYLSGGAGNDLLKGGNGNDTLYGGDHNDSLYGGTGNDELRGDKGDDLLYGESGNDTLSGG 153
Query: 358 QRSILEYTASYEDLIQVIGQD 378
Y S D + + +
Sbjct: 154 FGEDSLYGGSGNDFLYGVSGN 174
>gi|238899272|ref|YP_002924955.1| putative RTX-family protein-29 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229467033|gb|ACQ68807.1| putative RTX-family protein-29 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 410
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 12/134 (8%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSG 294
G IDL+ +G ++ IA IE +G ND++IG+ NN + G
Sbjct: 8 ANGRGYQIDLHKGEVKYVG---EDTKIATLENIEHAIGHRETNDILIGDDRNNHLEGAGG 64
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D G G D + S N D L+++E +
Sbjct: 65 SDTLSGHGGNDIL---SLSSGTATGGEGIDSYRILQNNRAADTLTEIEV-----KETVGQ 116
Query: 355 NVKQRSILEYTASY 368
+ IL+Y A+
Sbjct: 117 HDTSNIILDYNAAN 130
>gi|220908893|ref|YP_002484204.1| hypothetical protein Cyan7425_3521 [Cyanothece sp. PCC 7425]
gi|219865504|gb|ACL45843.1| hypothetical protein Cyan7425_3521 [Cyanothece sp. PCC 7425]
Length = 161
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ + ++G +GND + GN+ ++ G D G +G D + Y
Sbjct: 31 LSGGPGDDTLHGGLGNDRLLGGAGNDFLYGNAGDDCLEGGPGYDHLRGGAGNDRYIYTLG 90
Query: 313 SYLYKIYR 320
+I
Sbjct: 91 DGFDRIED 98
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 38/94 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY + ++ +++ G GND ++G + N+ + ++G+D +G G D A
Sbjct: 22 MFGYAGDDILSGGPGDDTLHGGLGNDRLLGGAGNDFLYGNAGDDCLEGGPGYDHLRGGAG 81
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ Y + + D L + L
Sbjct: 82 NDRYIYTLGDGFDRIEDELGENTLELRQISSLHI 115
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ GS +D + G +V F +G+D+ G G DT +
Sbjct: 3 HIHGSLQDDQLQGTQEGDVMFGYAGDDILSGGPGDDTLHGGLGND 47
>gi|110679731|ref|YP_682738.1| type I secretion target repeat-containing protein [Roseobacter
denitrificans OCh 114]
gi|109455847|gb|ABG32052.1| type I secretion target repeat protein, putative [Roseobacter
denitrificans OCh 114]
Length = 678
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 1/117 (0%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ G +G+D + G +V +GND+ DG +G D A + + ++
Sbjct: 3 AGAGDDRAFGGTGDDTIFGEDGTDVLGGGAGNDMLDGGAGNDIINGGAGNDVVSGGTGDD 62
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ N+ LR D + + A + L G D+
Sbjct: 63 SVTAGTGNDDVDGGDGTD-NLRGNDGRDEINGGAGADRIAGGADNDRLTGGSGNDLI 118
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 12/162 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
I G+D D ++ G N + ++ G + I
Sbjct: 34 NDMLDGGAGNDIINGGAGNDVVSGGTGDDSVTAGTGNDDVDGGDGTDNLRGNDGRDEING 93
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G + ND + G S N++ F G+DV G D + ++ +
Sbjct: 94 GAGADRIAGGADNDRLTGGSGNDLIFGGDGDDVITGGGDDDRLVGGHGADMFHFGTADGR 153
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
++ DF + V+ +R AD S++ + A
Sbjct: 154 DVI-------TDFEAGVDSIRLADASHYSLSYNTFTGDTTLA 188
>gi|84683432|ref|ZP_01011335.1| type I secretion target repeat protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84668175|gb|EAQ14642.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2654]
Length = 710
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 15/142 (10%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY + + I+ G D + D + G L G
Sbjct: 505 TADRIYGTDGSDE-------IWGRAGHDFINAGGGDDWVQGNKGRDKILTGTGDDFTKGR 557
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ TI + + G+ G+D + G + ++ GND G SG D
Sbjct: 558 KGPDTILGGPGDDDLRGNRGHDQIFGEAGHDTLKGGRGNDWLYGGSGDDVIIAGRGDD-- 615
Query: 317 KIYRFENAIIVYDANEHKQDFL 338
+ + + F+
Sbjct: 616 -VLVGGPGHDILSGKQGADRFV 636
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ + + G+ G+D + G + ++ G+D G+ G D + R
Sbjct: 500 ISGAMTADRIYGTDGSDEIWGRAGHDFINAGGGDDWVQGNKGRDKILTGTG-DDFTKGRK 558
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I+ + +++ F + D++ + + Y S +D+I
Sbjct: 559 GPDTILGGPGDDDLRGNRGHDQI-FGEAGHDTLKGGRGNDWLYGGSGDDVIIA 610
>gi|218682796|ref|ZP_03530397.1| Hemolysin-type calcium-binding region [Rhizobium etli CIAT 894]
Length = 687
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 62/205 (30%), Gaps = 27/205 (13%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ GN + K + G+D + G ++L T + S
Sbjct: 458 SNGGNETFKGLGGSDVLKGGAGADVLDGGTGNDT--ASYAGSAAVNVNLATGAASGGQAA 515
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ IE++ GSS +DV+ G N+ NV +G D DG +G D A +
Sbjct: 516 GDKIA-----SIENLTGSSYDDVLTGGNNGGNVLIGGAGADKLDGGAGNDFLIGGAGKDI 570
Query: 316 YKIYRFENAIIVYDANEHK--------QDFLSDVERLRFA--DQCIDSVNVKQRSILEYT 365
E+ I+ E DF V+++ + D +
Sbjct: 571 MTGGIGEDTFILKAPTETGSGSNRDVITDFQHGVDKIDLSAIDANGSAAGDGTFHFQ--- 627
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFG 390
+ H+ +
Sbjct: 628 ---AQENALFDHKAGALAWHYEDHA 649
>gi|113476371|ref|YP_722432.1| glycerophosphoryl diester phosphodiesterase [Trichodesmium erythraeum
IMS101]
gi|110167419|gb|ABG51959.1| glycerophosphoryl diester phosphodiesterase [Trichodesmium erythraeum
IMS101]
Length = 1372
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 7/123 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G L G I LN ++ G N I + ++G GND + G
Sbjct: 1159 KGTPKTERLIGGVGDDTIIGLNGAD--TLAGRIGNDQIIGSRGNDLLLGQDGNDELQGRQ 1216
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-----YDANEHKQDFLS 339
N+ G+D +G G D + I ++++ D ++
Sbjct: 1217 GNDHLLGGDGDDQLNGGQGRDRINGGPGDDTLTGGASIDRFIFNSNEEFESDNFGIDTIN 1276
Query: 340 DVE 342
+ +
Sbjct: 1277 NFQ 1279
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 8/114 (7%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + TI +++ G GND +IG+ N++ GND G G D
Sbjct: 1169 GGVGDDTIIGLNGADTLAGRIGNDQIIGSRGNDLLLGQDGNDELQGRQGNDHLLGGDGDD 1228
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD---VERLRF-ADQCIDSVNVKQRSILEY 364
+ + I D L+ ++R F +++ +S N +I +
Sbjct: 1229 QLNGGQGRDRI----NGGPGDDTLTGGASIDRFIFNSNEEFESDNFGIDTINNF 1278
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
TI G D L + +IG N + L + + G + N + + + G
Sbjct: 1174 DTIIGLNGADTLAGRIGNDQIIGSRGNDLLLGQDGNDELQGRQGNDHLLGGDGDDQLNGG 1233
Query: 275 SGNDVVIGNSANNVFFESSGNDVF 298
G D + G ++ + D F
Sbjct: 1234 QGRDRINGGPGDDTLTGGASIDRF 1257
>gi|207723112|ref|YP_002253514.1| putative calcium-binding hemolysin-like protein (partial sequence)
[Ralstonia solanacearum IPO1609]
gi|206588305|emb|CAQ19000.1| putative calcium-binding hemolysin-like protein (partial sequence)
[Ralstonia solanacearum IPO1609]
Length = 825
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SGG D D TL G + I ++ G + + +++ G GND++ G +
Sbjct: 556 SGGTDGAD-TLTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGA 614
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N+ + +GNDV DG +G DT + Y + + +Y + + L+ ++
Sbjct: 615 DNDNLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQF 673
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND + G + N+ + +GND DG +G DT
Sbjct: 212 NVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEG 271
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ Y + + +Y + + L+ ++
Sbjct: 272 GNDTYLFGKGDGQDFIYSDYDTSANKLNVIQF 303
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + +++ G GND + G + N+ + +GND DG +G DT
Sbjct: 397 NVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEG 456
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ Y + + +Y + + L+ ++
Sbjct: 457 GNDTYLFGKGDGQDFIYSDYDTSANKLNVIQF 488
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SGG D D TL G + I ++ G + + +++ G GND++ G +
Sbjct: 1 SGGTDGAD-TLTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGA 59
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N+ + ++GNDV DG +G DT + Y + + +Y + + L+ ++
Sbjct: 60 DNDNLYGANGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQF 118
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S ++ GY + TI ++V G G+DV+ G + N+ + GND G + D +
Sbjct: 191 SSQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLY 250
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + N+ D + ++D + + + +
Sbjct: 251 GGNGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPS 310
Query: 369 EDLIQVIGQDVFESMK 384
E ++ G D+ S+
Sbjct: 311 EVVVTRSGSDLVLSIA 326
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S ++ GY + TI ++V G G+DV+ G + N+ + GND G + D +
Sbjct: 376 SSQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLY 435
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + N+ D + ++D + + + +
Sbjct: 436 GGNGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPS 495
Query: 369 EDLIQVIGQDVFESMK 384
E ++ G D+ S+
Sbjct: 496 EVVVTRSGSDLVLSIA 511
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 50/133 (37%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + I ++V G G+DV+ G + N+ + GND+ G + D +
Sbjct: 564 TLTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGN 623
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + N+ D + ++D + + + + E +
Sbjct: 624 GNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVV 683
Query: 372 IQVIGQDVFESMK 384
+ G D+ S+
Sbjct: 684 VTRSGSDLVLSIA 696
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 50/133 (37%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + I ++V G G+DV+ G + N+ + GND+ G + D +
Sbjct: 9 TLTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGAN 68
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + N+ D + ++D + + + + E +
Sbjct: 69 GNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVV 128
Query: 372 IQVIGQDVFESMK 384
+ G D+ S+
Sbjct: 129 VTRSGSDLVLSIA 141
>gi|76827525|gb|AAI07359.1| Mmp23 protein [Mus musculus]
Length = 377
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 15/135 (11%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA--QEVARWALGEWSKVVDLTFEETSI- 75
R + +R+ LT LSF L+P + +A A WS V +F E +
Sbjct: 78 RRYTLTPARLRWDHFNLTYRVLSFPRNLLSPEETRRGLA-AAFRMWSDVSPFSFREVAPE 136
Query: 76 -HSDIKFI-------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG---TILSHNA 124
SD+K + + + P + +F + + RY KG T L H A
Sbjct: 137 RPSDLKIVHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGVWLTNLVHVA 196
Query: 125 LHEIGHALGLMHPGS 139
HEIGHALGLMH
Sbjct: 197 AHEIGHALGLMHSQQ 211
>gi|54293628|ref|YP_126043.1| structural toxin protein RtxA [Legionella pneumophila str. Lens]
gi|53753460|emb|CAH14915.1| structural toxin protein RtxA [Legionella pneumophila str. Lens]
Length = 7919
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G G+D + G N++ SG+DV G +G DT A + + + + +
Sbjct: 7227 DTISGGQGDDRIYGQEGNDIIDAGSGDDVIVGGTGNDTLTGGAGADQFVLVKGQGGASAG 7286
Query: 329 DAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A + DF +++++ I V+V YT
Sbjct: 7287 AAPIDTITDFEVNIDKIVINGNNITGVSVSTPVSNTYT 7324
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GNDV+ G + N+ GND G G+DTFF+ + + D
Sbjct: 7770 LNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 7823
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ D SD L +D + +++ S+ Y
Sbjct: 7824 KANPVDQSSDASVLNLSD-LLSDADLETNSLDNYL 7857
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ N + + + G++GND + G N+ G D F SG D
Sbjct: 7760 SLTMLANNPQLNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD---GG 7816
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + + D LSD +
Sbjct: 7817 VDTITDFKANPVDQSSDASVLNLSDLLSDAD 7847
>gi|229465792|gb|ACQ67566.1| putative RTX-family protein-7 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 1968
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 252 SIGGYEKNM-TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + N IA + + G +GND ++ NN + +GND G G D +
Sbjct: 1774 TLHGGDGNDRIIATGNGNKWLYGDAGNDTILAYEGNNFIYGGTGNDFLSGGVGDDIYLIT 1833
Query: 311 APSYLYKIYRFEN--AIIVYDANEHKQDFLSDVERLRF 346
I +I+Y +E + + + E L F
Sbjct: 1834 PNDGHTVIEDTGGNDTLILYGMDEGEFHTIEEGEDLVF 1871
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 18/165 (10%)
Query: 196 GAPKGSLGN--NIYKIEVQ--QKDSPFIQTIYDS-GGDDLL--DLTLIGGVKNYIDLNTE 248
GA + + GN +I+ + D + + +D G+D + D L+ V+ +IDL
Sbjct: 1287 GAKQYTGGNKPDIFYLSNTSLNTDESMLLSKFDGLAGEDTIVFDQVLLRDVRYFIDLTVG 1346
Query: 249 SWSSIGGYEKNMTIAQHTV-IESVVGSS-GNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G N + + IE V G+S N+ + GN+ NN G D G G D
Sbjct: 1347 QI--YSGSRNNKKLVANIKNIEHVYGNSKTNNEIKGNNENNYLNGGGGYDEIWGYFGDDV 1404
Query: 307 FFY-------YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ + Y + + + V +D S +
Sbjct: 1405 LTFEQGSIDGGEGNDHYILLQNSTSENVIAHIYEVKDDFSFINLH 1449
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 10/102 (9%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVI----------GNSANNVFFESSGNDVFDGSSGL 304
G ++ I ++ G GND +I G++ N+ GN+ G +G
Sbjct: 1759 GAGDDLIIDHSHHHRTLHGGDGNDRIIATGNGNKWLYGDAGNDTILAYEGNNFIYGGTGN 1818
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
D +Y I + ++ D + L ++ F
Sbjct: 1819 DFLSGGVGDDIYLITPNDGHTVIEDTGGNDTLILYGMDEGEF 1860
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 8/139 (5%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ ND +IG+S +N+F GND +G +G D + P + N + +
Sbjct: 1596 TPFNDKLIGDSESNLFISRRGNDQLEGGAGRDIYRIEHPDDNERRIWINNNDNSTNPDYD 1655
Query: 334 KQDFLSDVERLRF----ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+E++ +D I N + ++ + Q + H+ +
Sbjct: 1656 LLILPVGIEQMNIIFKGSDDVILKTNSSNQKKKLEIVFWQFMKNKSYQHITILDAHYQLY 1715
Query: 390 GLSEGRDITFDSYLYLGSY 408
+ ++ + +YL Y
Sbjct: 1716 HI----EVNEEGKIYLDQY 1730
>gi|149204673|ref|ZP_01881638.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
gi|149141932|gb|EDM29982.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
Length = 720
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 49/174 (28%), Gaps = 7/174 (4%)
Query: 227 GDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+DL+ D +L+ + + ++V+ GND ++G
Sbjct: 99 GNDLINQDYVGDPNGDRIDNLDAAGTNGELVNSNADFVNASGGNDTVLAGFGNDTILGGD 158
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ +G D+ G G DT + + A +
Sbjct: 159 GNDSLDGGTGADLIFGGMGNDTLDGGTGTDASDTALGPIYQEISTAGAQAVAGANGRGAF 218
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++V + L + + ES H +EG T
Sbjct: 219 TVTTTSNETVAFGSTADLSGFFMGD---IALPNPAVESETH--THRYTEGLSPT 267
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
++T ++ SI G + + + ++ + + +S ND + G++ +++ G+D+ G +G
Sbjct: 351 ISTATFGSIDGAIYELFVDTNPLVPN-ITTSANDTLFGDAGDDLLLGRDGDDLIAGGTGN 409
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
D F + ++ V D ++ DF+
Sbjct: 410 DRFVPGTGHDTISDFGSDDTNAVRDGDQSNNDFV 443
>gi|7741585|gb|AAF69021.1| calcium-binding outer membrane-like protein [Pseudomonas putida]
Length = 1800
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V YI + + G + N ++ + + G G+D + G N++ +G
Sbjct: 1616 TTSNVHQYITEHYTEFDISGAKDGNDILSGGNGNDILFGQGGSDTLNGGKGNDILLGGTG 1675
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
ND G G D + + + + ++ D N+ + D +
Sbjct: 1676 NDTLIGGQGDDILIGGSGADTFVWKAGDVGNDVIKDFNKAEGDRI 1720
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T +D G + L GG N I ++ G + N + T ++++G G+D
Sbjct: 1627 HYTEFDISGAKDGNDILSGGNGNDILFGQGGSDTLNGGKGNDILLGGTGNDTLIGGQGDD 1686
Query: 279 VVIGNSANNVFF---ESSGNDVF 298
++IG S + F GNDV
Sbjct: 1687 ILIGGSGADTFVWKAGDVGNDVI 1709
>gi|225074|prf||1208296B hemolysin hlyA
Length = 1024
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 24/142 (16%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D++ GN N+ + GND G +G D + + N +
Sbjct: 738 DIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGVAGNNYLNGG 797
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HF 386
D D+ N +++L + L G D+ + +
Sbjct: 798 DG----------------DDELQVQGNSLAKNVLFGGKGNDKLYGSEGADLLDGGEGDDL 841
Query: 387 YEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 842 LKGGYGN------DIYRYLSGY 857
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 9/153 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G +G +
Sbjct: 740 FHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGVAGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR---SILEYTASYE 369
++ A V D L E D +K I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVL-FGGKGNDKLYGSEGADLLDGGEGDDLLKGGYGNDIYRYLSGYG 858
Query: 370 DLIQVIGQDVFESMK----HFYEFGL-SEGRDI 397
I + + F + EG D+
Sbjct: 859 HHIIDDDGGKEDKLSLADIDFRDVAFKREGNDL 891
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 27/158 (17%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDDL++ G + Y D ++ S G + + + ++G
Sbjct: 733 GSKFTDIFHGADGDDLIEG-NDGNDRLYGDKGNDTLS---GGNGDDQLYGGDGNDKLIGV 788
Query: 275 SGNDVVIGNSAN------------NVFFESSGN---------DVFDGSSGLDTFFYYAPS 313
+GN+ + G + NV F GN D+ DG G D +
Sbjct: 789 AGNNYLNGGDGDDELQVQGNSLAKNVLFGGKGNDKLYGSEGADLLDGGEGDDLLKGGYGN 848
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+Y+ I+ D + K+D LS + + F D
Sbjct: 849 DIYRYLSGYGHHIIDD-DGGKEDKLSLAD-IDFRDVAF 884
>gi|56681800|gb|AAW21436.1| leukotoxin A [Pasteurellaceae bacterium I47]
Length = 377
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + TI + + + G G+D++ G + ++ GND+ G G D F +
Sbjct: 237 FNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQG 296
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
I E + ++ + +D
Sbjct: 297 DGNDSITESEGNDKLSFSDSNLKDL 321
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 228 FKGSKFDDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 287
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 288 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 324
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ ++ F G D DG+ G D F I N
Sbjct: 216 VEEIIGTSHNDIFKGSKFDDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDF 272
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 273 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 317
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 15/189 (7%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
++ +G K +G Y + K ++ I + +D+ + N D
Sbjct: 193 KIEYRHGNNKQHVG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFDDAFNGGD----G 242
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTF 307
+I G + N + + + G +G+D + G N++ G+D+F G D+
Sbjct: 243 VDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSI 302
Query: 308 FYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + N H + E++ Q ++I Y A
Sbjct: 303 TESEGNDKLSFSDSNLKDLTFEKVNHHLVITNTKQEKVTI--QNWFREAEFAKTIHNYVA 360
Query: 367 SYEDLIQVI 375
+ +D I+ I
Sbjct: 361 TRDDKIEEI 369
>gi|119483460|ref|ZP_01618874.1| hypothetical protein L8106_05386 [Lyngbya sp. PCC 8106]
gi|119458227|gb|EAW39349.1| hypothetical protein L8106_05386 [Lyngbya sp. PCC 8106]
Length = 1615
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 63/188 (33%), Gaps = 21/188 (11%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D +L G + L S+ G +N ++ T + + G GND V+G N+
Sbjct: 270 DAGDDSLFGDKDSDTLLGGVGADSMYGGRENDSLIGGTGDDVLFGDKGNDTVVGGEGNDS 329
Query: 289 FFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYRFENAIIVYDANEH------K 334
NDV G+SG D Y I N II D
Sbjct: 330 VSGGDENDVLFGNSGTDLLDGGIGDDQLYGGQGDDSAIGGDGNDIIFGDIGNDTAFGGTG 389
Query: 335 QDFLSD--VERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQD--VFESMKHFYEF 389
D + + + D D++ Q IL + L IG D +
Sbjct: 390 NDQVLGNQGDDVLSGDIGADAIFGGQGEDILNGGRGPDTLSGDIGNDLLIGGRGADVVTG 449
Query: 390 GLSEGRDI 397
G EGRDI
Sbjct: 450 G--EGRDI 455
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 5/166 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F I GDD + G + I I G + N I + + G
Sbjct: 206 GSEFNDNISALDGDDTV----FGLAGDDILSGDAGDDVINGNQGNDGIQGGEGNDCLRGG 261
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND ++G++ ++ F +D G G D+ + + I + ++ D
Sbjct: 262 QGNDFILGDAGDDSLFGDKDSDTLLGGVGADSMYGGRENDSL-IGGTGDDVLFGDKGNDT 320
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D+ +L+ + L G D
Sbjct: 321 VVGGEGNDSVSGGDENDVLFGNSGTDLLDGGIGDDQLYGGQGDDSA 366
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 53/177 (29%), Gaps = 18/177 (10%)
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
FG T ++ + ++YG G++ I+ G+D
Sbjct: 340 FGNSGTDLLDGGIGDDQLYGGQ----GDD------SAIGGDGNDIIFGDIGNDT----AF 385
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG N L + + G I + + G G D + G+ N++ G D
Sbjct: 386 GGTGNDQVLGNQGDDVLSGDIGADAIFGGQGEDILNGGRGPDTLSGDIGNDLLIGGRGAD 445
Query: 297 VFDGSSGLDTFFYY----APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
V G G D F I D + DF V+++
Sbjct: 446 VVTGGEGRDIFSIGLVLNQSESGGSIIIGTTGGQTLDQADLITDFEQGVDQIGLTGG 502
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 13/175 (7%)
Query: 196 GAPKGSLGNNI--YKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWS- 251
G + + + Y + PF TI D GG D + + V N+ N +S++
Sbjct: 1372 GTNEVTTDGTLIEYIRLGTRGFGPFEYTISDGRGGIDTAQVGVN--VDNFSSDNPQSFAG 1429
Query: 252 -----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ G N T+ +++ G + ND ++G N+ G D G SG D
Sbjct: 1430 RNLSDNLNGLGGNDTLVGLEGNDTLSGDNDNDSIVGGVGNDSITGGLGIDNLTGGSGTDL 1489
Query: 307 FFYYAPSY--LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
F Y +P I + D ++D E L + +
Sbjct: 1490 FRYVSPEDGGGLAFNAISTDEINTQIGLGQFDVITDFEGLGSTNGDQIQLEFGTT 1544
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 44/136 (32%), Gaps = 8/136 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E +I +++ G+D V G + +++ +G+DV +G+ G D +
Sbjct: 197 GTEDGDSILGSEFNDNISALDGDDTVFGLAGDDILSGDAGDDVINGNQGNDGIQGGEGND 256
Query: 315 --------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + D + + + + + +L
Sbjct: 257 CLRGGQGNDFILGDAGDDSLFGDKDSDTLLGGVGADSMYGGRENDSLIGGTGDDVLFGDK 316
Query: 367 SYEDLIQVIGQDVFES 382
+ ++ G D
Sbjct: 317 GNDTVVGGEGNDSVSG 332
>gi|117620923|ref|YP_857205.1| structural toxin protein RtxA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562330|gb|ABK39278.1| structural toxin protein RtxA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 4260
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 9/171 (5%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTESWS--SIGGYEK 258
Y + F T + G D D + N + DL ++ G +
Sbjct: 4029 YDNSASGVNVTFNSTQGHAIGSDFGDSITGNSLDNILSGGDGDDLLYGMGGKDTLVGGKG 4088
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + + +++ G +G+D +IG N++ G D+ G G DT A S +K
Sbjct: 4089 NDVLDGGSGNDTLYGEAGDDTLIGGIGNDILQGGDGKDLLIGGLGSDTMTGGAGSDTFKW 4148
Query: 319 YRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + S + L +D + + + L
Sbjct: 4149 LAGDADGSTDKITDFTLGNPTSGGDVLDLSDLLVGVPSAANNNDLATALDN 4199
>gi|114793614|pdb|2CLT|A Chain A, Crystal Structure Of The Active Form (Full-Length) Of
Human Fibroblast Collagenase.
gi|114793615|pdb|2CLT|B Chain B, Crystal Structure Of The Active Form (Full-Length) Of
Human Fibroblast Collagenase
Length = 367
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 56/194 (28%), Gaps = 49/194 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 9 RWEQTHLTYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTPLTFTKVSEGQADIM 61
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A H
Sbjct: 62 ISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLHRVAAHA 120
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M +F D
Sbjct: 121 LGHSLGLSHSTDIGA-------------------LM--------YPSYTFSGDVQLAQDD 153
Query: 188 IVAVQKIYGAPKGS 201
I +Q IYG +
Sbjct: 154 IDGIQAIYGRSQNP 167
>gi|110678217|ref|YP_681224.1| type I secretion target repeat-containing protein [Roseobacter
denitrificans OCh 114]
gi|109454333|gb|ABG30538.1| type I secretion target repeat protein [Roseobacter denitrificans
OCh 114]
Length = 633
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 10/165 (6%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
IY GDD + G N + + ++ G + ++ + + G G+D
Sbjct: 428 DIIYGGEGDDFI----FGNDDNDLLYGGDGKDTLYGQQGIDSLRGEEGDDILFGGDGDDR 483
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ GNS ++ + +GND+ G SG D ++ V D+ D +
Sbjct: 484 LSGNSGADMLWGGAGNDILYGGSGSDILRGGLGDDTFEFNE------VSDSTRLAADVIK 537
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D+E + A + ++V ++ + + + E +
Sbjct: 538 DIEGVGSAGGDVIDLSVIDANVTGLNYVNDSFTFLGVKTREEGLA 582
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 53/150 (35%), Gaps = 7/150 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+A + + G +G D + G + ++V GND DG +G D
Sbjct: 331 LKGGNGDDTLAGGLGNDRIFGGTGADEIFGGAGDDVIVGREGNDTVDGGAGNDIILGNFK 390
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQ-RSILEYTASYE 369
++AI +D+L E + Q +D + + + +
Sbjct: 391 QDRLSGGAGDDAI----FGGDGRDYLYGNEGNDRLYGGQNLDIIYGGEGDDFIFGNDDND 446
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
L G+D + EG DI F
Sbjct: 447 LLYGGDGKDTLYGQQGIDSLRGEEGDDILF 476
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 14/132 (10%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I+ GDD++ + T+ GG N I L + G + I +
Sbjct: 351 GGTGADEIFGGAGDDVIVGREGNDTVDGGAGNDIILGNFKQDRLSGGAGDDAIFGGDGRD 410
Query: 270 SVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ G+ GND + G ++ + G ND+ G G DT + +
Sbjct: 411 YLYGNEGNDRLYGGQNLDIIYGGEGDDFIFGNDDNDLLYGGDGKDTLYGQQGIDSLRGEE 470
Query: 321 FENAIIVYDANE 332
++ + D ++
Sbjct: 471 GDDILFGGDGDD 482
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 65/209 (31%), Gaps = 39/209 (18%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTES----------WSSIGGYEKNMTIAQHTVIESVVGS 274
G D +D + + I+L T + + ++ + I +
Sbjct: 141 GSGVDRMDAS-VSTASFRINLGTFATGVEGMRFVNFENLMTGAGDDVIIGTDDTNLIDSG 199
Query: 275 SGNDVVIGN------------------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+G+D V G N++ SGND G G D + L
Sbjct: 200 AGDDRVFGRGGDDGLIGGDGDDILFGEDGNDILRGGSGNDRLYGGDGHDEMYGQTGDDLM 259
Query: 317 KIYRFENAIIVYDANE-----HKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYE 369
++++ ++ +DFL+ + + D+++ + + L Y +
Sbjct: 260 IGKAGGDSLVGGLGSDILIGGAGRDFLTGGDDDDELYGGVDSDNLDAGEGNDLLYGGDGD 319
Query: 370 DLIQVIGQD---VFESMKHFYEFGLSEGR 395
D + G D + GL R
Sbjct: 320 DFLAAYGGDDVLKGGNGDDTLAGGLGNDR 348
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 13/126 (10%), Positives = 37/126 (29%), Gaps = 1/126 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G ++ + ++G +G D + G ++ + +D D G D +
Sbjct: 261 GKAGGDSLVGGLGSDILIGGAGRDFLTGGDDDDELYGGVDSDNLDAGEGNDLLYGGDGDD 320
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y ++ + + ++ L + ++ + +
Sbjct: 321 FLAAYGGDDVLKGGNGDDTLAGGLGNDRIFGGTGADEIFGGAG-DDVIVGREGNDTVDGG 379
Query: 375 IGQDVF 380
G D+
Sbjct: 380 AGNDII 385
>gi|254422212|ref|ZP_05035930.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196189701|gb|EDX84665.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 662
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 21/180 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNT------ 247
G+ GN++ T+ G+D LD TL GG I +
Sbjct: 480 TGTDGNDV------LIGDTGKDTLDGKAGNDFLDGDEGDDTLFGGKDADILIGGDGNDWL 533
Query: 248 ---ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + ++ G N T+ ++++G +GND++ G + G+D G +G
Sbjct: 534 TGGQGFDTLYGGNGNDTLLGGNGKDTLIGGNGNDIIKGEVGKDTLIGGMGDDNLFGGAGD 593
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILE 363
D F I F + A+ LS ++ D VK + +
Sbjct: 594 DIFVLGVGEGRDIIVDFSGRDRIGLASGLGIGDLSFFGNQIIHTDTAEILAVVKGVNTMS 653
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 22/180 (12%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ G D + + G NY+ ++ G + N + T +++ G +GND + G
Sbjct: 450 VNGDGIDDIVIGGYGSE-NYVVFGAAKSETLTGTDGNDVLIGDTGKDTLDGKAGNDFLDG 508
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ ++ F D+ G G D + +Y + N +D L
Sbjct: 509 DEGDDTLFGGKDADILIGGDGND--WLTGGQGFDTLYGGNGNDTLLGGN--GKDTLIG-- 562
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFD 400
I++ + LI +G D + + G+ EGRDI D
Sbjct: 563 -------------GNGNDIIKGEVGKDTLIGGMGDDNLFGGAGDDIFVLGVGEGRDIIVD 609
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL G N + + ++ G N + +++ G D++IG N+
Sbjct: 478 TLTGTDGNDVLIGDTGKDTLDGKAGNDFLDGDEGDDTLFGGKDADILIGGDGNDWLTGGQ 537
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G D G +G DT + I + + D A I
Sbjct: 538 GFDTLYGGNGNDTLLGGNGKDTLIGGNGNDIIKGEVGKDTLIGGMGDDNLFGGAGDDIFV 597
Query: 354 VNVKQRSILEYTASYEDLIQVI 375
+ V + + S D I +
Sbjct: 598 LGVGEGRDIIVDFSGRDRIGLA 619
>gi|83951792|ref|ZP_00960524.1| type I secretion target repeat protein [Roseovarius nubinhibens
ISM]
gi|83836798|gb|EAP76095.1| type I secretion target repeat protein [Roseovarius nubinhibens
ISM]
Length = 1056
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 222 IYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I GDDL+ + T++GG N I G + + +I +S+ G +G
Sbjct: 688 IDGGAGDDLIFGEDDNDTILGGEGNDTIDGGIDDDFIRGQDGDDSILGGHGNDSLRGGNG 747
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+D ++G N+V + ND+ G +G DT + I E+
Sbjct: 748 DDTILGGDGNDVIEGRADNDLIIGGAGADTMSGDTGRDTFIIGSAEDG 795
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 9/126 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IG 254
G G+ G+++ D D D + G N + + +
Sbjct: 449 GIVSGTAGDDVIDTGYTGDP--------DGDMIDNEDAIIAGEAPNDDIVRAGDGNDHVL 500
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + +++ G G+D + G + N+ +GND G G DT
Sbjct: 501 AGLGDDDVEGGAGNDTLDGGVGDDSLDGGTGNDSLLGGAGNDTLIGGDGRDTALGGDGDD 560
Query: 315 LYKIYR 320
+
Sbjct: 561 VIDTGS 566
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
IA+ +++ G G+D ++G N+V G DV DG G DT
Sbjct: 328 VIAEGD--DTLSGGEGDDTLLGEGGNDVLTGGEGADVIDGGDGADTI 372
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 39/152 (25%), Gaps = 13/152 (8%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
D +S+ G + I V GND V + ++ F +G+
Sbjct: 51 TTPADAEGDRIDGGDASLAGESGDDDI--------VNAGDGNDTVSAGAGDDEVFGGAGD 102
Query: 296 DVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
D DG +G D + D D D+ +
Sbjct: 103 DEIDGGAGNDLLLGDRDINDNIEARGAFRWDQAPDPDGDDGTAGIDTQDDLNGHTQSVGN 162
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+D S T D + G D
Sbjct: 163 VDVTFTAHNSGSNDTVFRGDYVDFDGVDAGAG 194
Score = 40.9 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 61/224 (27%), Gaps = 41/224 (18%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ I+ + + D G +D D+ ++ D + G
Sbjct: 549 GRDTALGGDGDDVIDTGSDFTTRPFPLPDDGYNDPFDVPADTDTEDDRD-------YVDG 601
Query: 256 YEKNMTIAQHTVIESVVGSSGND------------------VVIGNSANNVFFESSGNDV 297
N TI+ ++++G +GND +I ++ +GND
Sbjct: 602 GAGNDTISTGDDRDTILGGAGNDVIDGGLDDDDINGGDGDDYIIAGEGSDTVLGGAGNDT 661
Query: 298 FDGSSGL----------------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G D + +N I+ D D
Sbjct: 662 IYGGVNNEAANVPDDRDPELDNGDDYIDGGAGDDLIFGEDDNDTILGGEGNDTIDGGIDD 721
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ +R D + L + ++ G DV E
Sbjct: 722 DFIRGQDGDDSILGGHGNDSLRGGNGDDTILGGDGNDVIEGRAD 765
>gi|260577452|ref|ZP_05845409.1| hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259020332|gb|EEW23671.1| hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 385
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 14/131 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE ++ +G D+++G+ +N +GND G +G DT + L + +
Sbjct: 143 IEDLLTGAGADMLVGSVLDNGLTAGAGNDTLYGIAGNDTLSGDLGNDLIDGGVGVDTALF 202
Query: 328 YDANE--------------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
H D L +E LR ++LE A + L
Sbjct: 203 LGVQAIQVDLASLAAQDTGHGIDTLRGIENLRAGSGADLLSGSTSANLLEGVAGNDTLFG 262
Query: 374 VIGQDVFESMK 384
G D +
Sbjct: 263 RSGNDTLDGGA 273
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 6/134 (4%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G ++ IA + + G SGND + G + ++ G+DV G +G D A
Sbjct: 52 GSQLGDVLIADNAAN-LLHGLSGNDQLFGRAGDDTLLGGDGDDVLSGGTGADRLEGGAGR 110
Query: 314 YLYK-----IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
R + V + D+L D+E L V + L A
Sbjct: 111 DRAVYVDGLAVRVNLGLAVQQNTGYGLDWLIDIEDLLTGAGADMLVGSVLDNGLTAGAGN 170
Query: 369 EDLIQVIGQDVFES 382
+ L + G D
Sbjct: 171 DTLYGIAGNDTLSG 184
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQK-DSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSI 253
G G+ + +Y I + D G G D +G +DL +S+
Sbjct: 163 GLTAGAGNDTLYGIAGNDTLSGDLGNDLIDGGVGVDTALF--LGVQAIQVDL-----ASL 215
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ I IE++ SG D++ G+++ N+ +GND G SG DT A +
Sbjct: 216 AAQDTGHGIDTLRGIENLRAGSGADLLSGSTSANLLEGVAGNDTLFGRSGNDTLDGGAGN 275
Query: 314 YL 315
Sbjct: 276 DQ 277
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D T + I+LN + + G +E++ +GNDV+ G++
Sbjct: 301 GSDTAVFT--ASLATVINLNLTTAQNTGQGLDRFL-----GVENLTTGAGNDVLTGSTLA 353
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
NV +GND +G +G DT +
Sbjct: 354 NVLSAGAGNDRLNGGAGDDTLLGSDGNDT 382
Score = 38.2 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 3/87 (3%)
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G D +G +G D Y + + AI + E D L ++E L +
Sbjct: 1 GLGADRLEGGAGRDRADYSQATAGVLVDMLNGAI---NTGEAVGDVLVEIENLCGSQLGD 57
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++L + + L G D
Sbjct: 58 VLIADNAANLLHGLSGNDQLFGRAGDD 84
>gi|163733663|ref|ZP_02141105.1| protein containing FG-GAP repeats [Roseobacter litoralis Och 149]
gi|161392774|gb|EDQ17101.1| protein containing FG-GAP repeats [Roseobacter litoralis Och 149]
Length = 1523
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 53/180 (29%), Gaps = 17/180 (9%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D GG + L + G + I+ + V+G G D + GNS N+
Sbjct: 1260 DDRFWGGAGDDRLLGNSGNDFLSGQDGADWISGGRGNDEVLGGVGEDRLFGNSGNDFLSG 1319
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G D G G D A + ++ I + D L
Sbjct: 1320 QAGADWISGGQGNDQMRGGAGNDQLIGGEGDDKIE----AGNGHDILRG-------GIDN 1368
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
D + Y + +D++Q + G E + + + D+
Sbjct: 1369 DRLYGGLGDDRLYGSDGDDVLQ------GGLGLDYLNGGAGEDTFVFASATSSIAGAVDV 1422
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 13/124 (10%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-----NEH 333
++ ++ F+ +G+D G+SG D + R + ++
Sbjct: 1253 TILAGWGDDRFWGGAGDDRLLGNSGNDFLSGQDGADWISGGRGNDEVLGGVGEDRLFGNS 1312
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGL 391
DFLS A S + A + LI G D E+ G+
Sbjct: 1313 GNDFLSG-----QAGADWISGGQGNDQM-RGGAGNDQLIGGEGDDKIEAGNGHDILRGGI 1366
Query: 392 SEGR 395
R
Sbjct: 1367 DNDR 1370
Score = 41.3 bits (95), Expect = 0.52, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 34/127 (26%), Gaps = 10/127 (7%)
Query: 263 AQHTVIESVVGSSGNDVVIG---------NSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
A E++ G +DV+ ++ G+D F G +G D + +
Sbjct: 1219 AGTDASETINGGPNDDVINALGGDDRGNGGDGDDTILAGWGDDRFWGGAGDDRLLGNSGN 1278
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ I N+ + +RL + + +
Sbjct: 1279 DFLSGQDGADWISGGRGNDEVLGGV-GEDRLFGNSGNDFLSGQAGADWISGGQGNDQMRG 1337
Query: 374 VIGQDVF 380
G D
Sbjct: 1338 GAGNDQL 1344
>gi|158298189|ref|XP_554330.3| AGAP003929-PA [Anopheles gambiae str. PEST]
gi|157014404|gb|EAL39361.3| AGAP003929-PA [Anopheles gambiae str. PEST]
Length = 478
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 21/146 (14%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGEWSKVVDLTFEET 73
D LR + + ++ +T ++ + A+ +A+ A GEWSK L F
Sbjct: 68 DQSLRHRRYVIGSESWRKRRITYFIANWSSKVGEDAVAKFMAK-AFGEWSKYSKLRFVRV 126
Query: 74 -SIHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG---I 114
+DI + + P + Y +++FD+ + W+ +
Sbjct: 127 YDPSADIIVGFGSGHHGDNYPFDGPGNVLAHAFYPYEMNAYGGDVHFDEDENWKENSTHL 186
Query: 115 GKGTILSHNALHEIGHALGLMHPGSY 140
+G A+HE+GH+LGL H Y
Sbjct: 187 SEGVDFYSVAIHELGHSLGLAHSPVY 212
>gi|153838884|ref|ZP_01991551.1| putative RTX toxin [Vibrio parahaemolyticus AQ3810]
gi|149747675|gb|EDM58589.1| putative RTX toxin [Vibrio parahaemolyticus AQ3810]
Length = 3823
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND++ G N+ F + ND+ G G D ++K I V
Sbjct: 3671 DTIYGGAGNDILFGQGGNDKLFGGADNDILIGGLGSDILTGGDGEDIFK------WIDVA 3724
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + DF S + L F+D D + +L S
Sbjct: 3725 NERDTVTDFSSSEDSLDFSDLFEDLSKDEVGDLLSDLQS 3763
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
YI N + Y++ TI + + G GND + G + N++ G+D+ G
Sbjct: 3653 YITENQAEFEQSRYYDQADTIYGGAGNDILFGQGGNDKLFGGADNDILIGGLGSDILTGG 3712
Query: 302 SGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G D F + + + F ++ D ++ +D D
Sbjct: 3713 DGEDIFKWIDVANERDTVTDFSSSEDSLDFSDLFEDLSKD 3752
>gi|330945876|gb|EGH47249.1| calcium binding hemolysin protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 260
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Query: 219 IQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
Q + S GDD L D+ G + ++ ++ G + + T+ + +
Sbjct: 10 FQVLQGSDGDDTLSGTSSNDVIDAGLGDDTVN-GGGGDDTLKGNDGSDTLNGGDGNDLLQ 68
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + GN N+V +GNDV +G +G DT+ + S + I
Sbjct: 69 GGAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYLFGKGSGQDTVNNGGEVRIGKTDTL 128
Query: 333 HKQDF 337
D
Sbjct: 129 KLTDL 133
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 232 DLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D + ++ + S + G+ + I+ +++ G+ GND + G +
Sbjct: 181 DGSEWNQTTIKSNVIQSTDSDDTLRGFATDDVISAGLGDDAIYGADGNDTLSGGDGIDAL 240
Query: 290 FESSGNDVFDGSSGLDTFFY 309
+ GND G +G DT +
Sbjct: 241 YGDVGNDHLLGDAGNDTLYG 260
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 16/47 (34%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + G+D + G N+ G D G G D A +
Sbjct: 211 DVISAGLGDDAIYGADGNDTLSGGDGIDALYGDVGNDHLLGDAGNDT 257
Score = 37.8 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 22/46 (47%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+++ G + +DV+ ++ + + GND G G+D + +
Sbjct: 202 DTLRGFATDDVISAGLGDDAIYGADGNDTLSGGDGIDALYGDVGND 247
>gi|297690071|ref|XP_002822450.1| PREDICTED: stromelysin-1-like [Pongo abelii]
Length = 477
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 51/188 (27%), Gaps = 46/188 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F N + +FD + W GT L A HEI
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDT-TGTNLFLVAAHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + +Y + + + + DI
Sbjct: 221 GHSLGLFHSANTEA--LMYPLYHSLTDLTRFR----------------------LSQDDI 256
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 257 NGIQSLYG 264
>gi|254467146|ref|ZP_05080557.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
gi|206688054|gb|EDZ48536.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
Length = 293
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSV----MSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
Y+ G +G DY+ + T M Y+ ++++ + ++ D
Sbjct: 49 EYDYGDLYFGAFADYQYGTTYTLTDAIFMDYW--ENTLASVTGMDLTFDIMDD-----FS 101
Query: 195 YG---APKGSLGNNIY--KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
YG + + + + + + ++ GG D + D ++ GG N
Sbjct: 102 YGVQFSNMWNTDDTFWLNDYQDYVQAGQGDDIVWSEGGADRIYGQGGDDSIYGGAGNDKL 161
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ G + + + G +G D + G +V + GND G G
Sbjct: 162 FGNAGADVLDGMSGRDLLKGGGGSDFLWGGAGKDRLAGGGGIDVLYGGKGNDRLTGGKGA 221
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
D F + + I F +A +
Sbjct: 222 DAFVFNSGDGQDTITDFNSAYDLIVFESGA 251
>gi|60476777|gb|AAX21415.1| ApxIIA [Actinobacillus porcitonsillarum]
Length = 956
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G++G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG++G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 45/135 (33%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|130486970|ref|NP_001076262.1| matrix metalloproteinase-14 precursor [Oryctolagus cuniculus]
gi|3041677|sp|Q95220|MMP14_RABIT RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
gi|1805295|gb|AAB41500.1| membrane type 1 metalloproteinase [Oryctolagus cuniculus]
Length = 582
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 39/126 (30%), Gaps = 24/126 (19%)
Query: 53 EVARWALGEWSKVVDLTFEET---------------------SIHSDIKFISSNNGYVCT 91
E R A W L F E H D G++
Sbjct: 142 EAIRKAFRVWESATPLRFREVHYAYIRDGREKQADIMIFFAEGFHGDSTPFDGEGGFLAH 201
Query: 92 PRYDSRYFM-EINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +FD A+ W R G + A+HE+GHALGL H + +
Sbjct: 202 AYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFY 261
Query: 149 VDNDYE 154
D E
Sbjct: 262 QWMDTE 267
>gi|294624752|ref|ZP_06703417.1| hemolysin-type calcium-binding region Ig [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292600956|gb|EFF45028.1| hemolysin-type calcium-binding region Ig [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 407
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 16/138 (11%)
Query: 256 YEKNMTIAQHTVIESVVGSS----------GNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N TI + +++ + G+D + G + ++V F G+D G SG D
Sbjct: 212 LVGNATIGTGNALGNMLSGNDRDNILRGLDGDDALFGRAGDDVLFGGDGSDQLYGGSGRD 271
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----SDVERLRFA--DQCIDSVNVKQR 359
T Y + V +A+ + +D L + + FA + + Q
Sbjct: 272 TLVGGDGDDTYYYGSGQGDDTVVNADVYGEDVLYLNEASFDEFDFARIGDDMVATFNDQP 331
Query: 360 SILEYTASYEDLIQVIGQ 377
L + Y D + +
Sbjct: 332 GSLTFKDWYTDAANRVDR 349
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 3/103 (2%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL G + I L + + + Q I+ G G+D +IG N+
Sbjct: 58 DLDGTGNEEANILLGNAGANVLRAVATDGYSYQADWID---GGEGDDTLIGAGGNDSLIG 114
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND +G G D +F + + AN
Sbjct: 115 GLGNDRMEGGGGDDLYFVDSVGDVVVETADSGEGSFAIANADI 157
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 23/66 (34%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G ++ + GND G G D LY + + ++ +
Sbjct: 92 DWIDGGEGDDTLIGAGGNDSLIGGLGNDRMEGGGGDDLYFVDSVGDVVVETADSGEGSFA 151
Query: 338 LSDVER 343
+++ +
Sbjct: 152 IANADI 157
>gi|27382784|ref|NP_774313.1| hypothetical protein bll7673 [Bradyrhizobium japonicum USDA 110]
gi|27355957|dbj|BAC52938.1| bll7673 [Bradyrhizobium japonicum USDA 110]
Length = 465
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQ 264
P I G+D LD + I G +N + + G TI
Sbjct: 69 NDTVSGGPGNDNIDGGAGNDTLDGNAGIDTIAGGDGDDTINGGAGDDTLNGNAGVDTIHG 128
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ I+++ G +G+D + G++ ++ GND G +G DT + A +
Sbjct: 129 NAGIDTIDGGTGDDHLFGDAGDDSIHGGDGNDDVHGGAGADTLWGDAGDDTLSGDAGNDV 188
Query: 325 IIVYDANEHKQDFLSD 340
+ D N+ L D
Sbjct: 189 LNGGDGNDVLNGGLGD 204
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 7/134 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + N T++ +++ G +GND + GN+ + G+D +G +G DT A
Sbjct: 62 TITGLDGNDTVSGGPGNDNIDGGAGNDTLDGNAGIDTIAGGDGDDTINGGAGDDTLNGNA 121
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
NA I D L + + + D D L A
Sbjct: 122 GVD----TIHGNAGIDTIDGGTGDDHLFGDAGDDSIHGGDGNDDVHGGAGADTLWGDAGD 177
Query: 369 EDLIQVIGQDVFES 382
+ L G DV
Sbjct: 178 DTLSGDAGNDVLNG 191
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 6/169 (3%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQHTVI 268
T+ G D + + + N + G G N T++
Sbjct: 235 NGGAGADTLNGGDGIDTMHGDAGDDLMDGGGGNDVMFGDAGDDLMAGGAGNDTMSGGNGD 294
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GND + G++ ++ G DV +G G D+ A + ++ +
Sbjct: 295 DELSGGAGNDTLNGDAGDDTLAGGDGADVLNGGDGADSLSGGAGNDTLNGDAGDDELSGG 354
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + L D + L + DL G
Sbjct: 355 NGADVLSGGLGD-DVLTGGGGTDTHNFGDGTATNFGNDEVTDLSAADGD 402
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 22/205 (10%)
Query: 199 KGSLGNNIYKIEV---QQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G G++ + I TI GDD L D ++ GG N D++ +
Sbjct: 109 NGGAGDDTLNGNAGVDTIHGNAGIDTIDGGTGDDHLFGDAGDDSIHGGDGND-DVHGGAG 167
Query: 251 SS----------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ + G N + + + G G+D + G++ N+ GND+ +G
Sbjct: 168 ADTLWGDAGDDTLSGDAGNDVLNGGDGNDVLNGGLGDDTLNGDAGNDTLNGGLGNDLLNG 227
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D A + + + ++ + F D D + +
Sbjct: 228 GMGDDILNGGAGAD--TLNGGDGIDTMHGDAGDDLMDGGGGNDVMFGDAGDDLMAGGAGN 285
Query: 361 ILEYTASYED-LIQVIGQDVFESMK 384
+ +D L G D
Sbjct: 286 DTMSGGNGDDELSGGAGNDTLNGDA 310
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 36/134 (26%), Gaps = 8/134 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + + G GND + G N+ GND DG +G DT A
Sbjct: 36 INGTAGDDVLPGTAADDQINGLQGNDTITGLDGNDTVSGGPGNDNIDGGAGNDTLDGNAG 95
Query: 313 SYLYKIYRF-----ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN---VKQRSILEY 364
A D + + D + +
Sbjct: 96 IDTIAGGDGDDTINGGAGDDTLNGNAGVDTIHGNAGIDTIDGGTGDDHLFGDAGDDSIHG 155
Query: 365 TASYEDLIQVIGQD 378
+D+ G D
Sbjct: 156 GDGNDDVHGGAGAD 169
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 53/196 (27%), Gaps = 24/196 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T++ GDD L + L GG N + ++ G N T+
Sbjct: 159 NDDVHGGAGADTLWGDAGDDTLSGDAGNDVLNGGDGNDVLNGGLGDDTLNGDAGNDTLNG 218
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDV------------------FDGSSGLDT 306
+ + G G+D++ G + + G D G +G D
Sbjct: 219 GLGNDLLNGGMGDDILNGGAGADTLNGGDGIDTMHGDAGDDLMDGGGGNDVMFGDAGDDL 278
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
A + ++ + N+ D + L D L A
Sbjct: 279 MAGGAGNDTMSGGNGDDELSGGAGNDTLNGDAGD-DTLAGGDGADVLNGGDGADSLSGGA 337
Query: 367 SYEDLIQVIGQDVFES 382
+ L G D
Sbjct: 338 GNDTLNGDAGDDELSG 353
>gi|85705999|ref|ZP_01037095.1| type I secretion target repeat protein [Roseovarius sp. 217]
gi|85669587|gb|EAQ24452.1| type I secretion target repeat protein [Roseovarius sp. 217]
Length = 330
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E + TI+ T +S++G+ G+D + G + ++ G DV G G D + +
Sbjct: 79 INGLEADDTISGGTGNDSLLGAQGDDRISGEAGDDTLHGGDGADVLAGGEGRDALYGHND 138
Query: 313 SYLYKIYRFENAIIVYDANE 332
+ +++++ N+
Sbjct: 139 ADDLSGGVGDDSLVGSAGND 158
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 14/191 (7%)
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+P + I + GDD + D T+ GG N L + I G + T+
Sbjct: 62 SGTPEAEDITGTEGDDQINGLEADDTISGGTGNDSLLGAQGDDRISGEAGDDTLHGGDGA 121
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-------YLYKIYRF 321
+ + G G D + G++ + G+D GS+G D A ++
Sbjct: 122 DVLAGGEGRDALYGHNDADDLSGGVGDDSLVGSAGNDLLHGDAGDDALHGDLDDDTLHGG 181
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY--TASYEDLIQVIGQDV 379
++ + F ID + + A ++DL+
Sbjct: 182 LGRDTLFGGWGDDVVVGLVDDPATFGLDDIDGGDFLNGGPGDDLILAGHDDLVDAGEGAD 241
Query: 380 FESMKHFYEFG 390
+ + G
Sbjct: 242 LIVLGDWISAG 252
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 44/133 (33%), Gaps = 14/133 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G+ G+D + G A++ +GND G+ G D A
Sbjct: 68 EDITGTEGDDQINGLEADDTISGGTGNDSLLGAQGDDRISGEAGDDTL----HGGDGADV 123
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHF 386
A +D L D S V S++ +A + L G D +
Sbjct: 124 LAGGEGRDALYG-----HNDADDLSGGVGDDSLV-GSAGNDLLHGDAGDDALHGDLDDDT 177
Query: 387 YEFGLSEGRDITF 399
GL GRD F
Sbjct: 178 LHGGL--GRDTLF 188
>gi|312090361|ref|XP_003146586.1| hypothetical protein LOAG_11015 [Loa loa]
gi|307758249|gb|EFO17483.1| hypothetical protein LOAG_11015 [Loa loa]
Length = 208
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 65/203 (32%), Gaps = 50/203 (24%)
Query: 16 HLLRDQYWSNYF----IRYKPDVLTTHRL--SFDITELNPNAQEVARWALGEWSKVVDLT 69
LL + + I+Y+ + L + D +L R A+ W V+D+
Sbjct: 20 QLLEETAYYGRLQGKIIQYRIAQYSRKELHQNMDEVKLKEYVDAALRKAVKLWEDVIDVK 79
Query: 70 FEETS-IHSDIKFIS--------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
F E ++I+ I N D + +I+ D ++ W
Sbjct: 80 FIEWPHTKANIEVIFATFYHGDKYPFDGKGNELAHTFYPNDLIWHGQIHIDDSEPWGP-- 137
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L+ HE+GH LGL H S+M+
Sbjct: 138 -SGRNLNWVMAHELGHVLGLEHSHDE--------------------SLMTSHYQGFEGTV 176
Query: 175 ASFGYCATPMVSDIVAVQKIYGA 197
YC DI +Q +YG+
Sbjct: 177 PKLHYC------DIALIQSLYGS 193
>gi|300863875|ref|ZP_07108796.1| hypothetical protein OSCI_380004 [Oscillatoria sp. PCC 6506]
gi|300338118|emb|CBN53942.1| hypothetical protein OSCI_380004 [Oscillatoria sp. PCC 6506]
Length = 717
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TI + G+D + G ++ID N+ S S G + N T+ + +S+ G GND+
Sbjct: 29 DTISGNSGNDSI---YGGKENDFIDGNSGSDSLFGDLD-NDTVNGNEDNDSIYGGRGNDL 84
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYA-PSYLYKIYRFENAIIVYDANEHKQDFL 338
+ GNS ++V F G D G G D F + ++ D D L
Sbjct: 85 LAGNSGSDVLFGDRGADNLTGGEGADVFVLTRYADGGPSLTSGGLSLADADVINDFTDNL 144
Query: 339 SDVER---LRFADQCIDSVNVKQR 359
+ L FAD +
Sbjct: 145 DLIGLSGGLTFADLNLVDAGNNTF 168
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 1/134 (0%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ I N+ + S I G ++N I ++ +S+ G ND V GN N+ + GND+
Sbjct: 27 ENDTISGNSGNDS-IYGGKENDFIDGNSGSDSLFGDLDNDTVNGNEDNDSIYGGRGNDLL 85
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G+SG D F + + ++ + S L AD D +
Sbjct: 86 AGNSGSDVLFGDRGADNLTGGEGADVFVLTRYADGGPSLTSGGLSLADADVINDFTDNLD 145
Query: 359 RSILEYTASYEDLI 372
L ++ DL
Sbjct: 146 LIGLSGGLTFADLN 159
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 11/119 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SIGG ++ I +++ G+SGND + G N+ +SG+D G DT
Sbjct: 12 SIGGLPEDDRIFGLQENDTISGNSGNDSIYGGKENDFIDGNSGSDSLFGDLDNDTVNGNE 71
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + A D L F D+ D++ + + + Y D
Sbjct: 72 DNDS----IYGGRGNDLLAGNSGSDVL-------FGDRGADNLTGGEGADVFVLTRYAD 119
>gi|300867686|ref|ZP_07112331.1| hypothetical protein OSCI_3460025 [Oscillatoria sp. PCC 6506]
gi|300334269|emb|CBN57503.1| hypothetical protein OSCI_3460025 [Oscillatoria sp. PCC 6506]
Length = 1568
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 52/142 (36%), Gaps = 6/142 (4%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSG 276
T+ G+D + G + + + T + G + + + +++ G G
Sbjct: 1402 GNDTLCGGDGNDTI----YGDTGSPLAVGTAGGQDQMCGGLGDDFLYGNEGQDTLNGYVG 1457
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + G ++ + ND+ G G D+ + + ++ + E + + D QD
Sbjct: 1458 NDTLYGGKDDDYLIGGANNDLLKGDEGNDSLLGGSGNDIFALVIGEGSDTILDFQT-GQD 1516
Query: 337 FLSDVERLRFADQCIDSVNVKQ 358
+ L F D I N
Sbjct: 1517 LIGLSNGLSFFDLSITQGNNAA 1538
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 60/182 (32%), Gaps = 15/182 (8%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y ++ DS ++ G+D L+ E ++ G + N T
Sbjct: 1332 DTLYGGTLDPSNLDSTGQDLLFGGTGNDYLNG-------------EEGEDTLSGGDGNDT 1378
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + VG G+D++ G+ N+ GND G +G A
Sbjct: 1379 VQSGKGNDIAVGDLGDDLLFGDEGNDTLCGGDGNDTIYGDTGSPLAVGTAGGQDQMCGGL 1438
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + + + + L + +L+ + L+ G D+F
Sbjct: 1439 GDDFLYGNEGQDTLNGYVGNDTLYGGKDDDYLIGGANNDLLKGDEGNDSLLGGSGNDIFA 1498
Query: 382 SM 383
+
Sbjct: 1499 LV 1500
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 12/159 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL L +Y++ N + + G + ++ I + + G GND ++GN N+ +
Sbjct: 1278 DLLLGNEGNDYLNGNAGNDAIFAGKDNDIAIGGKDD-DLIFGDKGNDTLLGNEGNDTLYG 1336
Query: 292 S---------SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+G D+ G +G D + + N+ L D
Sbjct: 1337 GTLDPSNLDSTGQDLLFGGTGNDYLNGEEGEDTLSGGDGNDTVQSGKGNDIAVGDLGD-- 1394
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
L F D+ D++ + Y + L +
Sbjct: 1395 DLLFGDEGNDTLCGGDGNDTIYGDTGSPLAVGTAGGQDQ 1433
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 47/171 (27%), Gaps = 4/171 (2%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D D + G N L E ++ G + + T + + G +GND + G
Sbjct: 1309 GGKD--DDLIFGDKGNDTLLGNEGNDTLYGGTLDPSNLDSTGQDLLFGGTGNDYLNGEEG 1366
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ GND G D L + + D N+ +
Sbjct: 1367 EDTLSGGDGNDTVQSGKGNDIAVGDLGDDLLFGDEGNDTLCGGDGNDTIYGDTGSPLAVG 1426
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEG 394
A L + L +G D + G +
Sbjct: 1427 TAGGQDQMCGGLGDDFLYGNEGQDTLNGYVGNDTLYGGKDDDYLIGGANND 1477
Score = 38.6 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 20/149 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES-------------------S 293
+ G ++N I S+ G G+D ++G + N+ +
Sbjct: 1225 LNGSDRNDDIIGDNANNSINGLDGSDRLLGQAGNDNIYGGFPNIIPIGPDVDPDLLLGNE 1284
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND +G++G D F + + I ++ +I D + L +
Sbjct: 1285 GNDYLNGNAGNDAIFAGKDNDI-AIGGKDDDLIFGDKGNDTLLGNEGNDTLYGGTLDPSN 1343
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ + +L + L G+D
Sbjct: 1344 LDSTGQDLLFGGTGNDYLNGEEGEDTLSG 1372
>gi|254421352|ref|ZP_05035070.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196188841|gb|EDX83805.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 792
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 33/86 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +VG +GND +IG N+ GNDV G SG DTF
Sbjct: 674 GGNGRDFLDGGNGKDLLVGGTGNDTLIGGVGNDTLIGGQGNDVLTGGSGRDTFVLALGEG 733
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD 340
I F + ++ + L+
Sbjct: 734 SDLITDFGDQDLIGLSGGLGVGELTF 759
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 1/150 (0%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D D TL G K+ I T S + I K++ + + +++ G G D + G S+++
Sbjct: 594 TDSFDYTLSDGRKSSIATVTVSITGISDVPKDILLGTDS-NDNLTGGEGRDTLSGLSSSD 652
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
S G+DV G G DT ++ ++ N+ + + +
Sbjct: 653 FLDGSEGDDVLFGGQGYDTLIGGNGRDFLDGGNGKDLLVGGTGNDTLIGGVGNDTLIGGQ 712
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + + + + DLI G
Sbjct: 713 GNDVLTGGSGRDTFVLALGEGSDLITDFGD 742
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 14/179 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQH 265
Y + +K S T+ +G D+ L+G N +L + G + +
Sbjct: 599 YTLSDGRKSSIATVTVSITGISDVPKDILLGTDSND-NLTGGEGRDTLSGLSSSDFLDGS 657
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-------YKI 318
+ + G G D +IG + + +G D+ G +G DT + +
Sbjct: 658 EGDDVLFGGQGYDTLIGGNGRDFLDGGNGKDLLVGGTGNDTLIGGVGNDTLIGGQGNDVL 717
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
A D ++D F DQ + ++ + L+ +
Sbjct: 718 TGGSGRDTFVLALGEGSDLITD-----FGDQDLIGLSGGLGVGELTFSGNNILVTNTNE 771
>gi|269963802|ref|ZP_06178117.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831464|gb|EEZ85608.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 1919
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 9/208 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + + QQ D F+ + D G ++ + + D+ + ++ G
Sbjct: 1691 GSYSFTQSDTFTLEGSQQVDLNFLFKVSDGKGGVSDNVFTLTLNEPGADVASTERHAVMG 1750
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I+ ++G +G D G + +++ GND+ G G D S
Sbjct: 1751 NDLANLLDGSETIDIMLGQAGVDTFNGAAGDDILVGGLGNDILIGGLGNDILTGGEGSDT 1810
Query: 316 YKIY----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED- 370
+ E ++ V +D L + + AD + ++ + +D
Sbjct: 1811 FTFTNESLSSEVSMDVIKDFNLGEDKLDLSDIVSSADDDVAAMEALLDHVSASFDGEQDT 1870
Query: 371 ----LIQVIGQDVFESMKHFYEFGLSEG 394
+ GQ +++HF GL G
Sbjct: 1871 LNLTITNETGQSTSVALEHFDMSGLELG 1898
>gi|195475106|ref|XP_002089826.1| GE22137 [Drosophila yakuba]
gi|194175927|gb|EDW89538.1| GE22137 [Drosophila yakuba]
Length = 730
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 70/207 (33%), Gaps = 54/207 (26%)
Query: 16 HLLRDQYWSNYFIRYK-PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET- 73
+LL+ WS + + + Q++ AL W LTF +
Sbjct: 143 YLLQGPKWSKTDLTWSLVNQSMPDAFKV---------QKMVDSALRVWEYNSKLTFRQVY 193
Query: 74 SIHSDIKFISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGK---- 116
S +DI+ + + + ++D + +FD + W + G
Sbjct: 194 SDQADIQILFARRQHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGGSDDNR 253
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
GT + ALHE+GH+LGL H N VM + + +
Sbjct: 254 GTNFLNVALHELGHSLGLGHSSDPNA-------------------VMFPWYQNNEVGG-- 292
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLG 203
D +Q++YG+ + + G
Sbjct: 293 -----NLPDDDRNGIQELYGSKEKTWG 314
>gi|223041413|ref|ZP_03611616.1| ApxIIA [Actinobacillus minor 202]
gi|190692227|gb|ACE87883.1| ApxIIA [Actinobacillus minor 202]
Length = 956
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G++G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG++G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 45/135 (33%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|119486122|ref|ZP_01620182.1| hypothetical protein L8106_17302 [Lyngbya sp. PCC 8106]
gi|119456613|gb|EAW37742.1| hypothetical protein L8106_17302 [Lyngbya sp. PCC 8106]
Length = 2572
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 65/194 (33%), Gaps = 26/194 (13%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSG--GDDLL-----DLTLIGGVKNYID-----------L 245
+ +Y + K + G G+D + + T++GG N D L
Sbjct: 2288 DTLYSGKDDDKAFGGKDDDWVMGEQGNDTVVGDMGNDTVLGGTNNLPDDPTRDTNGEDWL 2347
Query: 246 NTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ G E N T+ ++V G ND + G + N++ F GND G G
Sbjct: 2348 FGGEGNDFMDGNEANDTLVAGVGDDTVHGGKQNDWLWGEAGNDMMFGDIGNDSLCGGEGN 2407
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT N + D L F D+ D++ + + +
Sbjct: 2408 DTLRGDQIDNGNSPSVGANGQQDQLSGGVGNDLL-------FGDEGQDTLCGGEDNDTLH 2460
Query: 365 TASYEDLIQVIGQD 378
+DL++ D
Sbjct: 2461 GGKDDDLLKGCSGD 2474
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + +G L+ + + G E T+ +++ G +D++ G S +
Sbjct: 2415 IDNGNSPSVGANGQQDQLSGGVGNDLLFGDEGQDTLCGGEDNDTLHGGKDDDLLKGCSGD 2474
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ GND G G DT + + + + + D + QD L E L
Sbjct: 2475 DLLLGEMGNDSLVGGEGNDTLTGGEGNNYFVLELDSGSDWITD-FQVGQDKLVLAEGLTI 2533
Query: 347 A 347
+
Sbjct: 2534 S 2534
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 4/120 (3%)
Query: 265 HTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
TV + V+ S+GND ++ NN+ + G+D+ S+ DT +
Sbjct: 2201 GTVNDDVITASAGNDTLVSGDGNNLIYTGLGDDLVFSSTENDTLYGELGKDT---LIGGP 2257
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + N QD L E + + + +D V+G+ +++
Sbjct: 2258 SGLEPIGNSGDQDILFGDENEDWLVGSFGQDTLYSGKDDDKAFGGKDDDWVMGEQGNDTV 2317
Score = 42.8 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 7/139 (5%)
Query: 244 DLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+LN+ + + + G + I +++V GN+++ +++ F S+ ND G
Sbjct: 2189 NLNSTNEADLLVGTVNDDVITASAGNDTLVSGDGNNLIYTGLGDDLVFSSTENDTLYGEL 2248
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQR 359
G DT PS L I + I++ + +D+L + L + K
Sbjct: 2249 GKDTLIGG-PSGLEPIGNSGDQDILF--GDENEDWLVGSFGQDTLYSGKDDDKAFGGKDD 2305
Query: 360 SILEYTASYEDLIQVIGQD 378
+ + ++ +G D
Sbjct: 2306 DWVMGEQGNDTVVGDMGND 2324
>gi|304393075|ref|ZP_07375004.1| bifunctional hemolysin/adenylate cyclase [Ahrensia sp. R2A130]
gi|303294840|gb|EFL89211.1| bifunctional hemolysin/adenylate cyclase [Ahrensia sp. R2A130]
Length = 1008
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 65/222 (29%), Gaps = 40/222 (18%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------ 252
G G++I+ + T D L + ++ L + +S
Sbjct: 318 NGGAGDDIFVVPKTGLGGVTRMTFDGGADTDTLTFSNDDVDSSFYGLRGFTGNSFIDLGL 377
Query: 253 -----------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I G ++ T IE+V+G+ G D + G+ N G D+ G
Sbjct: 378 GAPGQALLQEIIAGPLGDVFDITLTGIENVIGTLGVDEISGSLVANKLEGRDGKDIIFGR 437
Query: 302 SGLDTFFYYA---------PSYLYKIYRFENAIIVYDANEHKQ--------------DFL 338
+G D Y + A+++ A + D L
Sbjct: 438 NGDDVLVGGKDADVLDGGEGFDTVSYYDSDGAVVIDLAAQTATGGDAESLGGVGILRDQL 497
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
S E + + ++L + L + G D+
Sbjct: 498 SGFESATGTEYNDTLLGDDGVNVLMGLGGNDRLEGLGGNDII 539
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 15/184 (8%)
Query: 222 IYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-KNMTIAQH--TVIESVVGSSGN 277
+ D G G D + IDL ++ + + I + + ES G+ N
Sbjct: 451 VLDGGEGFDTVSY-YDSDGAVVIDLAAQTATGGDAESLGGVGILRDQLSGFESATGTEYN 509
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D ++G+ NV GND +G G D + S +V N +
Sbjct: 510 DTLLGDDGVNVLMGLGGNDRLEGLGGNDIIY----SGDATFGSQPIDALVLPTNPVNESV 565
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + D +T + E + V+GQ + E +
Sbjct: 566 ATAI------DLTNRMTLTLNGGNPNFTQNGEPVTSVLGQGDGTGAHFYKITVDEETTKL 619
Query: 398 TFDS 401
TF++
Sbjct: 620 TFNT 623
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 21/158 (13%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +G D + + D+ DG + D + +Y + R E ++
Sbjct: 707 MDVLIGGAGTDQLFAGDGEDELIGGIDGDLLDGGANNDLMVGGTGNDIY-VVRDEGDVVF 765
Query: 328 YDANEHKQ--------DFLSDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+A+E D VE LR I S +QR ++ + + G D
Sbjct: 766 EEADEGDDIVDTYVSWDMSDHVEVLRMQGSDDIASNGTEQRDLMFGNSGANYINGAGGAD 825
Query: 379 VFESMK-----------HFYEFGLSEGRDITFDSYLYL 405
V EG D + Y+
Sbjct: 826 VMAGGAGNDVYTVENSYDAVVEASGEGYDNVYAKIDYI 863
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 41/148 (27%), Gaps = 18/148 (12%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYRFENA 324
G+ D++ GNS N + G DV G +G D + A Y +
Sbjct: 802 GTEQRDLMFGNSGANYINGAGGADVMAGGAGNDVYTVENSYDAVVEASGEGYDNVYAKID 861
Query: 325 IIVYDANEHKQDFLSDV----------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I+ + +E + L +L D + +
Sbjct: 862 YIIPEDSEIESALLQGNAVVLRGSNSDNQLIGNDGVNIIDGRGGTDYMLGLGGNDIFQIT 921
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ + F EG I F +
Sbjct: 922 PENGAVDIIGDFQNGAPGEGDRIAFAGF 949
>gi|224097714|ref|XP_002311050.1| predicted protein [Populus trichocarpa]
gi|222850870|gb|EEE88417.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 56/189 (29%), Gaps = 45/189 (23%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDI 79
W+ + YK + +I + + A W++V + TF+E S +DI
Sbjct: 149 RWTKRQLTYKFRSSVQVPAAQNI-------RSICAKAFQRWAQVTEFTFQEVSVSSPADI 201
Query: 80 KFIS-----------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-TILSHNALHE 127
G +FD + W G L A+HE
Sbjct: 202 VIGFHRRDHNDGSAFDGPGGTLAHATPPVRNAMFHFDADENWSENPGPNQMDLESVAVHE 261
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
IGH LGL H N +MS +P D
Sbjct: 262 IGHLLGLDHNDDPNADA-----------------IMSSGIPSGIAKRD-------LRADD 297
Query: 188 IVAVQKIYG 196
+ V+ +YG
Sbjct: 298 VQGVRALYG 306
>gi|15485192|emb|CAC67447.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
gi|15485196|emb|CAC67449.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 26/207 (12%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNT 247
++YG G++ Q + + G+D +D + G G K
Sbjct: 598 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLG 649
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++S+ + + +H IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 650 KGFASLMDEPETSNVLRH--IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDDVL 707
Query: 308 FYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S ++ + + D + + +N
Sbjct: 708 LGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAGADQ 763
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 764 LWFARQGNDLEIRILGTDDALTVHDWY 790
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 154 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 213
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 214 DLGVWSNQLDGGAGVDTVKY 233
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S + G D D V+N ++ S IG + N + Q
Sbjct: 371 YGFGIEADLSREWVRKASALGVDYYD-----SVRNVENVIGTSMKDVLIGDAQANTLMGQ 425
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 426 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWF 476
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD + V ++Y S
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSV 398
Query: 369 EDLIQVIGQDVFESM 383
++ VIG + + +
Sbjct: 399 RNVENVIGTSMKDVL 413
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 60/194 (30%), Gaps = 15/194 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 207 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGETGIHADLQKGTVEKWPAL 266
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D
Sbjct: 267 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLD-- 323
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D K + EY E DL +
Sbjct: 324 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREW 383
Query: 376 GQDVFESMKHFYEF 389
+ +Y+
Sbjct: 384 VRKASALGVDYYDS 397
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 448 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 501
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 502 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 559
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 560 ANVLRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 618
Query: 328 YDANEHKQDF 337
D +
Sbjct: 619 LDGGDGNDTV 628
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 165 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 224
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R I D + D + ++E L +
Sbjct: 225 GAGVDTVKYNVHQPSEERLERMGETGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 284
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 285 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 316
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 159 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 218
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 219 SNQLDGGAGVDTV 231
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 59/206 (28%), Gaps = 31/206 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------- 252
+ +Y + Q D I G D +D + + + + +
Sbjct: 323 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSRE 382
Query: 253 -IGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ +V +E+V+G+S DV+IG++ N G+D T
Sbjct: 383 WVRKASALGVDYYDSVRNVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVRG 433
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
L F + D L D ++ ++
Sbjct: 434 GDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREHD 485
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGR 395
L G D + + G++ GR
Sbjct: 486 VLRGGAGVDTVDYSQAGAHAGVATGR 511
>gi|84501008|ref|ZP_00999243.1| type I secretion target repeat protein [Oceanicola batsensis
HTCC2597]
gi|84391075|gb|EAQ03493.1| type I secretion target repeat protein [Oceanicola batsensis
HTCC2597]
Length = 1210
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 201 SLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
+ N+ + D T++ GDDL+ D +L+GG N D+
Sbjct: 1000 NGTGNVDDLSGTPGDDTIGGFGRDDTLHGGDGDDLINGHGGDDSLVGGRGND-DMRGSPG 1058
Query: 251 SS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + G+ + T+ + + G G+DV++GN N++ + GND +G G DT
Sbjct: 1059 NDTLRGWGGDDTLRGFNDDDLLTGQHGDDVLVGNRGNDLLLGNEGNDSLNGGIGHDTLIG 1118
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ + + + + + D ++D
Sbjct: 1119 GEGADTVTGWAWGDVFGFDEGDIAPGDTITDF 1150
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + + G + TI +++ G G+D++ G+ ++ GND GS G DT
Sbjct: 1002 TGNVDDLSGTPGDDTIGGFGRDDTLHGGDGDDLINGHGGDDSLVGGRGNDDMRGSPGNDT 1061
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + ++ + +H D L + + L
Sbjct: 1062 LRGWGGDDTLRGFNDDDLLT----GQHGDDVLVGNR------GNDLLLGNEGNDSLNGGI 1111
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEG 394
++ LI G D FG EG
Sbjct: 1112 GHDTLIGGEGADTVTGWAWGDVFGFDEG 1139
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 13/141 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G+++ + +P I + G D +D + G +I G
Sbjct: 34 GGSGDDLLTEPDRHGATPGDDAIGGTSGADEID--ALSGDD-----------TIAGLRGA 80
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +++ G SG+D++ G + F G+D DG SG D F A + +
Sbjct: 81 DRVDGGAGRDALDGGSGDDLLSGGGEADRLFGGVGDDTMDGGSGDDLFDDIAGADSFSGG 140
Query: 320 RFENAIIVYDANEHKQDFLSD 340
+ I + + D +
Sbjct: 141 TGHDVIFAIEPEQGAPDEIEG 161
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 14/91 (15%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFD--------------GSSGLDTFFYYAPSY 314
+ +VG SG+D + GN + G+D+ D G +G DT +
Sbjct: 300 DHLVGGSGDDTLGGNGGEDWLNGRDGDDLIDGRDPAGTAGGDVLLGGAGWDTIRADDGDF 359
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ ++ +VY + + E L
Sbjct: 360 VAGFEGRDSYELVYGRADAAAITIFGYEVLS 390
Score = 41.3 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 51/155 (32%), Gaps = 16/155 (10%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GDD +D G + D + S GG ++ A IE G+ D +
Sbjct: 110 LFGGVGDDTMDG---GSGDDLFDDIAGADSFSGGTGHDVIFA----IEPEQGAP--DEIE 160
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G S ++ F+ G D G G D F +++ D + + +
Sbjct: 161 GGSGDDRFWGDDG-DTMTGGDGADRFMVATGR------PGAEPVVIRDLDFSRPEHGGQP 213
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+++ F D A DL G
Sbjct: 214 DQVIFTDAEGAIYPRSAFYDGTLNAGIGDLPDGSG 248
>gi|303251116|ref|ZP_07337302.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252584|ref|ZP_07534478.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302650126|gb|EFL80296.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306859906|gb|EFM91925.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 956
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ G++G+D + G + ++V +GN+ G +G D
Sbjct: 726 FKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKD 785
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y + + D+ QD L+ + + D V+ I +
Sbjct: 786 NDIYVHKTGDGNDSITDS--GGQDKLAFSD-VNLKDLTFKKVDSSLEIINQKGEKVRIGN 842
Query: 373 QVIGQDVFESMKHF 386
+ D+ ++ ++
Sbjct: 843 WFLEDDLASTVANY 856
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---A 324
+E ++GS ND+ G+ ++VF +G D DG++G D F A + N
Sbjct: 714 VEEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFLVG 773
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D +D +D+ + D + + L ++
Sbjct: 774 GTGNDIISGGKD--NDIYVHKTGDGNDSITDSGGQDKLAFSDVN 815
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 45/135 (33%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + + + + G +GN+ ++G + N++ ND++ G D+
Sbjct: 743 TIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + E++R + ++ Y A+
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRI--GNWFLEDDLASTVANYKATN 860
Query: 369 EDLIQVIGQDVFESM 383
+ I+ I E +
Sbjct: 861 DRKIEEIIGKGGERI 875
>gi|149203391|ref|ZP_01880361.1| RTX toxin and related Ca2+-binding protein-like protein
[Roseovarius sp. TM1035]
gi|149143224|gb|EDM31263.1| RTX toxin and related Ca2+-binding protein-like protein
[Roseovarius sp. TM1035]
Length = 1327
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 5/156 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G+DL+ G LN + ++ G+ I +++ G G+D + GN
Sbjct: 304 TDGEDLI--VGTRGRDAIFGLNDDD--NLAGFGGRDRIYGGAGDDNISGGDGDDSLFGND 359
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+++ G+D G +G D F + + + I D + D + +
Sbjct: 360 GDDLIAGGDGDDWISGGAGDDRLFGEGGNDVIYGDAGHDEIYGGDGEDKIFGGTGD-DTV 418
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D + IL A + L G+D
Sbjct: 419 KAGDGDDEVRGGADDDILHGDAGNDHLDGGRGKDQI 454
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 3/152 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D DL + +D +GG + T+ + G G+D++ GN+ +
Sbjct: 789 GEDGDDLIHGNAGDDALDGGAGDDQILGG-TGDDTVVAGAGEDEAWGEDGDDLIHGNAGD 847
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ G+D G +G DT A + +I DA + D +++ F
Sbjct: 848 DALDGGLGDDQIFGGTGDDTVVAGAGDDQ-AWGEDGDDLIHGDAGDDALDGGLGDDQI-F 905
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D+V + +DLI D
Sbjct: 906 GGTGDDTVVAGAGDDQAWGEDGDDLIHGDAGD 937
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 40/109 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + T+ + G G+D++ GN+ ++V +G+D G +G DT A
Sbjct: 949 IFGGTGDDTVVAGAGDDEAWGEDGDDLIHGNAGDDVLDGGAGDDQILGGTGDDTVVAGAG 1008
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ ++ I ++ + D E L S +
Sbjct: 1009 DDDVQGEDGDDLIHGNAGDDVLDGGVGDDEILGGTGDDALSGGTGDDQL 1057
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 3/155 (1%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G+D DL + +D I G + T+ + G G+D++ GN
Sbjct: 741 DVQGEDGDDLIHGDAGDDVLDGGAGDDQ-IFGGTGDDTVVAGAGDDEAWGEDGDDLIHGN 799
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ ++ +G+D G +G DT A + +I +A + D ++
Sbjct: 800 AGDDALDGGAGDDQILGGTGDDTVVAGAGEDE-AWGEDGDDLIHGNAGDDALDGGLGDDQ 858
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ F D+V + +DLI D
Sbjct: 859 I-FGGTGDDTVVAGAGDDQAWGEDGDDLIHGDAGD 892
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 51/158 (32%), Gaps = 8/158 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G +D +L GG +I G + + ++ + + + G G+D + G +
Sbjct: 321 GLNDDDNLAGFGGRDRIY--GGAGDDNISGGDGDDSLFGNDGDDLIAGGDGDDWISGGAG 378
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV--ER 343
++ F GNDV G +G D + F D + +
Sbjct: 379 DDRLFGEGGNDVIYGDAGHDEIYGGDGEDK----IFGGTGDDTVKAGDGDDEVRGGADDD 434
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D D ++ + + +D + D
Sbjct: 435 ILHGDAGNDHLDGGRGKDQILGGTGDDTVMAGAGDDEA 472
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 7/136 (5%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY + I+ GDD + D + GG + I + G
Sbjct: 389 DVIYGDAGHDEIYGGDGEDKIFGGTGDDTVKAGDGDDEVRGGADDDILHGDAGNDHLDGG 448
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I T ++V+ +G+D G +++ +G+D DG G D F
Sbjct: 449 RGKDQILGGTGDDTVMAGAGDDEAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTV 508
Query: 317 KIYRFENAIIVYDANE 332
++A D ++
Sbjct: 509 VAGADDDAAWGEDGDD 524
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 2/126 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + T+ + G G+D++ G++ ++ G+D G +G DT A
Sbjct: 859 IFGGTGDDTVVAGAGDDQAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTVVAGAG 918
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +I DA + D +++ F D+V + +DLI
Sbjct: 919 DDQ-AWGEDGDDLIHGDAGDDALDGGLGDDQI-FGGTGDDTVVAGAGDDEAWGEDGDDLI 976
Query: 373 QVIGQD 378
D
Sbjct: 977 HGNAGD 982
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I T ++VV +G+D V G +++ +G+DV DG +G D F
Sbjct: 715 LDGGAGDDQILGGTGDDTVVAGAGDDDVQGEDGDDLIHGDAGDDVLDGGAGDDQIFGGTG 774
Query: 313 SYLYKIYRFENAIIVYDANE 332
++ D ++
Sbjct: 775 DDTVVAGAGDDEAWGEDGDD 794
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 8/136 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + T+ + G G+D++ G++ ++V +G+D G G DT A
Sbjct: 589 IFGGTGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDVLDGGAGDDEILGGIGDDTVVAGAG 648
Query: 313 S------YLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEY 364
+ + V DA + L + + + ++ ++
Sbjct: 649 DDEAWGEDGDDLIHGDAGDDVLDAGLGDDEILGGIGDDTVVAGAGDDEAWGEDGDDLIHG 708
Query: 365 TASYEDLIQVIGQDVF 380
A + L G D
Sbjct: 709 DAGDDALDGGAGDDQI 724
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 60/203 (29%), Gaps = 27/203 (13%)
Query: 204 NNIYKIEVQQKDSPFI--QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS---- 252
+ I+ + + F IY GDD + D +L G + DL
Sbjct: 317 DAIFGLNDDDNLAGFGGRDRIYGGAGDDNISGGDGDDSLFGNDGD--DLIAGGDGDDWIS 374
Query: 253 -------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G N I + + G G D + G + ++ G+D G + D
Sbjct: 375 GGAGDDRLFGEGGNDVIYGDAGHDEIYGGDGEDKIFGGTGDDTVKAGDGDDEVRGGADDD 434
Query: 306 TFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A + +I V + + D + L D D+++
Sbjct: 435 ILHGDAGNDHLDGGRGKDQILGGTGDDTVMAGAGDDEAWGEDGDDLIHGDAGDDALDGGL 494
Query: 359 RSILEYTASYEDLIQVIGQDVFE 381
+ + +D + D
Sbjct: 495 GDDQIFGGTGDDTVVAGADDDAA 517
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I T ++VV +G+D G +++ +G+DV DG +G D
Sbjct: 580 LEGGVGDDQIFGGTGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDVLDGGAGDDEILGGIG 639
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
++ D ++ D
Sbjct: 640 DDTVVAGAGDDEAWGEDGDDLIHGDAGD 667
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 2/129 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + ++G G+D V+ + ++ + G+D+ G +G D A
Sbjct: 661 IHGDAGDDVLDAGLGDDEILGGIGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDALDGGAG 720
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ ++ ++ Q D + L D D ++ + + +D +
Sbjct: 721 DDQILGGTGDDTVVAGAGDDDVQG--EDGDDLIHGDAGDDVLDGGAGDDQIFGGTGDDTV 778
Query: 373 QVIGQDVFE 381
D
Sbjct: 779 VAGAGDDEA 787
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 8/140 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I T ++VV + +D G +++ ++G+DV DG G D
Sbjct: 490 LDGGLGDDQIFGGTGDDTVVAGADDDAAWGEDGDDLIHGNAGDDVLDGGLGDDQILGGTG 549
Query: 313 SYLYKIYRFENAIIVYDA-----NEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYT 365
++ D + D L + F D+V +
Sbjct: 550 DDTVVAGAGDDEAWGEDGDDLIHGDAGDDVLEGGVGDDQIFGGTGDDTVVAGAGDDEAWG 609
Query: 366 ASYEDLI-QVIGQDVFESMK 384
+DLI G DV +
Sbjct: 610 EDGDDLIHGDAGDDVLDGGA 629
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 7/138 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + I +++ G G+D + G + ++ +G+D G G D A
Sbjct: 879 GEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTVVAGAGDDQAWGEDGDDLIHGDAGDD 938
Query: 315 -------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+I+ V + + D + L + D ++ +
Sbjct: 939 ALDGGLGDDQIFGGTGDDTVVAGAGDDEAWGEDGDDLIHGNAGDDVLDGGAGDDQILGGT 998
Query: 368 YEDLIQVIGQDVFESMKH 385
+D + D +
Sbjct: 999 GDDTVVAGAGDDDVQGED 1016
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 39/134 (29%), Gaps = 7/134 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + I + + G G+D + G + ++ +G+D G G D A
Sbjct: 564 GEDGDDLIHGDAGDDVLEGGVGDDQIFGGTGDDTVVAGAGDDEAWGEDGDDLIHGDAGDD 623
Query: 315 -------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+I V + + D + L D D ++
Sbjct: 624 VLDGGAGDDEILGGIGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDVLDAGLGDDEILGGI 683
Query: 368 YEDLIQVIGQDVFE 381
+D + D
Sbjct: 684 GDDTVVAGAGDDEA 697
Score = 40.9 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 37/172 (21%)
Query: 200 GSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESW 250
G+ G+++ T+ GDD + DL + +D
Sbjct: 978 GNAGDDVLDGGAGDDQILGGTGDDTVVAGAGDDDVQGEDGDDLIHGNAGDDVLDGGVGDD 1037
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV------------- 297
I G + ++ T + + G SG+DV+ + +++ +GNDV
Sbjct: 1038 -EILGGTGDDALSGGTGDDQLAGDSGDDVIFSDEGDDISHGGAGNDVLFGGDGDDLLDGG 1096
Query: 298 --------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G G D A ++ ++ D +
Sbjct: 1097 DDDDIVSGDAGQDSLYGGDGNDILSGGADEDTVLGGAGDDIVVADDDSASDT 1148
>gi|312078628|ref|XP_003141821.1| hypothetical protein LOAG_06237 [Loa loa]
gi|307763016|gb|EFO22250.1| hypothetical protein LOAG_06237 [Loa loa]
Length = 336
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 43/136 (31%), Gaps = 21/136 (15%)
Query: 37 THRLSFDITELNP-NAQEVARWALGEWSKVVDLTFEETSIHSD-IKFISSNNGYVCTPRY 94
H +S+D E P + R AL W + + F+E + D I+F R
Sbjct: 135 KHPISYDFAETIPFETRAKIRAALALWEERTCIRFQENGPNVDRIEFFDGGGCSSFVGRT 194
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP--------GSYNGGYPV 146
+ I+ D+ HEIGH LG+ H G Y
Sbjct: 195 GGTQGISISTPGCDIIGI-----------ISHEIGHTLGIFHEQARSVMHYGPYGFAADP 243
Query: 147 YGVDNDYENDSFLTSV 162
Y N ++
Sbjct: 244 YIPTITTRNKFQQYTI 259
>gi|258625058|ref|ZP_05719978.1| hemolysin-type calcium-binding protein [Vibrio mimicus VM603]
gi|258582654|gb|EEW07483.1| hemolysin-type calcium-binding protein [Vibrio mimicus VM603]
Length = 496
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 31/214 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + G D ++ + I++N + + GG + T++ + IE
Sbjct: 274 NGTVFMTSGKEVVNGGKGTDTINYGHEFLSNSGINVNLTTGEASGGIAEGDTLS--SSIE 331
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA-------------PSYLY 316
+++GS+ + ++GNS+NN F SG+D + + G D A Y
Sbjct: 332 NLIGSNYSGTIVGNSSNNNLFGGSGSDKIESADGDDLISGGAYLLTSKDAKYITLGGKKY 391
Query: 317 KIYRFENAIIVYDANEH--------------KQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ F++ II D L E + F + + + S
Sbjct: 392 DVSDFDSDIINGGNGNDTIIGGPNDYIIGGSGVDTLVLSEHI-FGESTAIQLQNQNNSFR 450
Query: 363 EYTASYEDLIQVIGQDVFESMK-HFYEFGLSEGR 395
+ + + + FY+ G++ GR
Sbjct: 451 VLQSGSNKVYISDDVEKISILGQDFYKNGVNVGR 484
>gi|332969623|gb|EGK08641.1| iron-regulated protein FrpA [Kingella kingae ATCC 23330]
Length = 760
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 38/125 (30%), Gaps = 1/125 (0%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D G + + + I Y N TI +++ GND + + N
Sbjct: 403 GTDGNDFLQGYGDDDTVHAGAGND-HIETYNGNDTIYAGLGDDNIDAGGGNDRIYLETGN 461
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N + G+D S D S Y + V + N + R
Sbjct: 462 NRAYGGDGDDTIVSGSLNDILEGGMGSDTYIFGKQFGQDTVLNFNPQHDKDVLKFTHTRL 521
Query: 347 ADQCI 351
D I
Sbjct: 522 NDVTI 526
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ Y + ++++G++ D ++GN+ ++ +D +G SG DT+ +
Sbjct: 589 LYAYTDGGKLYGGNGNDTLIGNASIDYLVGNNGHDTLAGGKNDDRLEGGSGNDTYLFNLG 648
Query: 313 SYLYKIYR-FENAIIVYDANEHKQDF 337
+IY N + + KQD
Sbjct: 649 DGNDRIYDSAGNDTLKLGSGIAKQDL 674
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 11/152 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDGS 301
+ G N T+ + I+ +VG++G+D + G ++ SGND S
Sbjct: 598 LYGGNGNDTLIGNASIDYLVGNNGHDTLAGGKNDDRLEGGSGNDTYLFNLGDGNDRIYDS 657
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G DT + ++ N + + D ++ + + I+++ S
Sbjct: 658 AGNDTLKLGSGIAKQDLWFSRNGRDLTVQVLGQTDSVTVEDWFGIIPRRIETIQTHDGSH 717
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
L+ +A + + + + E
Sbjct: 718 LDVSAVQKLVQAMASFAPETGSGLGVLEQMKE 749
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 28/201 (13%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQ--------TIYDSGGDDLLDLTLIGGVKNYIDLN 246
Y KG IY + K ++ Y G+DL+ + G +N I ++
Sbjct: 312 YEFNKGFGATTIYNSDTSDKRHDVVRLNGVSKDAISYKRNGNDLI--IRVSGEQNSITVS 369
Query: 247 TESWSSIGGYEKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + I G+ GND + G ++ +GND +
Sbjct: 370 NMFAGDVLTQHIDAIEYDGGQISLAEIKETLLRGTDGNDFLQGYGDDDTVHAGAGNDHIE 429
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSD------VERLRFAD 348
+G DT + + I + N D + +E +D
Sbjct: 430 TYNGNDTIYAGLGDDNIDAGGGNDRIYLETGNNRAYGGDGDDTIVSGSLNDILEGGMGSD 489
Query: 349 QCIDSVNVKQRSILEYTASYE 369
I Q ++L + ++
Sbjct: 490 TYIFGKQFGQDTVLNFNPQHD 510
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + V++ VG G DV+ GN ++ S V +G +G D + + IY +
Sbjct: 269 AANNVLQ-AVGLLGRDVLNGNGGDDRLIVGSATAVVNGGNGSDVYEFNKGFGATTIYNSD 327
Query: 323 NAIIVYDA 330
+ +D
Sbjct: 328 TSDKRHDV 335
>gi|329848651|ref|ZP_08263679.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843714|gb|EGF93283.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 434
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 11/183 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + N T+ + + G GND + G S + + DV +G G DT A
Sbjct: 65 GVYAGDGNDTLTGGSATNRLHGEGGNDSLSGLSGGDELYGGEDGDVLEGGLGNDTIDGGA 124
Query: 312 PSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ A+ V + D L ++E L + ++L+
Sbjct: 125 GNDTASYASATAAVTVSLAITVAQNTGGAGSDTLLEIENLTGSGYADSLTGSDSDNVLDG 184
Query: 365 TASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGS--YDDLRNVFGSDRG 420
+ L +G D ++ EG DI + S Y S Y ++ + G+
Sbjct: 185 GIGNDTLTGGLGDDTYYVQATGDKVVELNGEGTDIIYSSASYSLSGRYVEVLTLTGTANT 244
Query: 421 AAA 423
A
Sbjct: 245 NAT 247
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 20/216 (9%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ +Y E + TI G+D + L + GG +
Sbjct: 99 GDELYGGEDGDVLEGGLGNDTIDGGAGNDT-ASYASATAAVTVSLAITVAQNTGGAGSDT 157
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ IE++ GS D + G+ ++NV GND G G DT++ A
Sbjct: 158 LL----EIENLTGSGYADSLTGSDSDNVLDGGIGNDTLTGGLGDDTYYVQATGDKVVELN 213
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ----------RSILEYTASYED 370
E I+Y + + VE L + + L+ A +
Sbjct: 214 GEGTDIIYSSASYSLSGRY-VEVLTLTGTANTNATGNSLGNTLNGNTGSNSLDGAAGNDT 272
Query: 371 LIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
+ +G D ++ +G D+ F + Y
Sbjct: 273 MAGGLGDDTYYVQTTGDNVVEAGGQGTDVIFSTVSY 308
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 30/180 (16%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGD------DLLDLTLIGGVKNYIDLNTESWSSI 253
G LG++ Y ++ + + ++GG + +L G I+L
Sbjct: 275 GGLGDDTYYVQTTGDN------VVEAGGQGTDVIFSTVSYSLSGRFAEVINLT------- 321
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + G+S N+ + GN N G D G G D F + A S
Sbjct: 322 -----------GSANINATGNSTNNTLTGNDGTNTLNGKGGADYLAGGLGADVFLFEASS 370
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I F A +++ + + +I AS D++
Sbjct: 371 GKDTITDFSAAQNDSLNVNAYTGGVANAGLVAQVGGNVVITFSSANTITVLNASQADVLA 430
>gi|329848650|ref|ZP_08263678.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843713|gb|EGF93282.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 548
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 33/218 (15%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y ++ ++T GG DL+ ++ S+S G +
Sbjct: 226 TGGLGNDTYYVDAAGDS--VVET--AGGGTDLVIASV-------------SYSLAGKQVE 268
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+T+ S G+ +V+ GN N+ +G+D DG +G DT + + Y +
Sbjct: 269 NLTLTGAAA--SATGNGLANVLTGNGGANMLDAGAGHDSLDGGAGTDTLIGGSGNDSYLV 326
Query: 319 YRFENAIIVYDANEHKQDFL---------SDVERLRFADQCIDSVNVKQ-RSILEYTASY 368
+ ++ +A D + DVE L + ++L
Sbjct: 327 DSTGD--VITEAAGGGADAVWSSVTYTLSVDVESLTLTGTAAINGTGNAVGNVLTGNTGN 384
Query: 369 EDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
L +G D ++ EG D+ F + Y
Sbjct: 385 NVLSGGLGNDTYYVQNTGDAVVELGGEGTDVIFSAVTY 422
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 11/197 (5%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIG-------GVKNYIDLNT 247
A LGN + T+ G+D + IG G + +++
Sbjct: 116 ATGNGLGNTLTGNAGNNSLDGGGASDTLIGGAGNDTYYVQAIGDAVVELPGEGTDLVVSS 175
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+WS G +N+++ + + G+S + + GN+ +NV +G+D G G DT+
Sbjct: 176 LTWSLAGMLVENLSLTGSADL-NGTGNSLGNSLTGNAGHNVLDGGAGSDTLTGGLGNDTY 234
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A +V + + VE L + ++L
Sbjct: 235 YVDAAGDSVVETAGGGTDLVIASVSYSLAGKQ-VENLTLTGAAASATGNGLANVLTGNGG 293
Query: 368 YEDLIQVIGQDVFESMK 384
L G D +
Sbjct: 294 ANMLDAGAGHDSLDGGA 310
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 39/126 (30%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G TI + G GND V G ++ +G+D+ G +G DTF+ +
Sbjct: 16 LFGGNAGETINAGDGDDIAFGQGGNDTVNGGQGHDSLDGGTGSDLLTGGTGNDTFYVDSA 75
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + +V + + D+ + L A L
Sbjct: 76 TDDVVELSGQGTDLVVASASYSLAGRVVENLTLTGSAHFDATGNGLGNTLTGNAGNNSLD 135
Query: 373 QVIGQD 378
D
Sbjct: 136 GGGASD 141
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 1/123 (0%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + + +GG + + ++L + + + + ++A
Sbjct: 41 DTVNGGQGHDSLDGGTGSDLLTGGTGNDTFYVDSATDDVVEL-SGQGTDLVVASASYSLA 99
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
V + S + GN N ++GN+ DG DT A + Y + +
Sbjct: 100 GRVVENLTLTGSAHFDATGNGLGNTLTGNAGNNSLDGGGASDTLIGGAGNDTYYVQAIGD 159
Query: 324 AII 326
A++
Sbjct: 160 AVV 162
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 11/211 (5%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
DA + + D+ ++ A GN + + + + G+D
Sbjct: 338 GGGADAVWSSVTYTLSVDVESLTLTGTAAINGTGNAVGNVLTGNTGNNVLS---GGLGND 394
Query: 230 LLDLTLIG-------GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ G G + + ++S G Y + + + I + G+S + ++G
Sbjct: 395 TYYVQNTGDAVVELGGEGTDVIFSAVTYSLSGRYAETINLTGSNNI-NATGNSLTNTLVG 453
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N +N G D G G D F + A + I F A +++
Sbjct: 454 NDGSNTINGKGGKDSLTGGLGADVFLFEASNGKDTITDFSAAQNDSINVNAYTGGVANNS 513
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + +I A+ D++
Sbjct: 514 LVAQVGGNVVITFDASNTITVIGATQADVLA 544
>gi|148556902|ref|YP_001264484.1| glycosyl transferase family protein [Sphingomonas wittichii RW1]
gi|148502092|gb|ABQ70346.1| glycosyl transferase, family 2 [Sphingomonas wittichii RW1]
Length = 1301
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--IT 398
++ +R + S Y + + D+ + H+ G +EGR
Sbjct: 276 IDYIRHGREADALDPNLYFSSAWYNSIHADVHAA----GMLPLHHYIHHGAAEGRSTGPL 331
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
FD Y S+DD+ G RH++ G EGR
Sbjct: 332 FDGLFYRKSHDDVT-------GDPLRHFLEVGAAEGR 361
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 39/119 (32%), Gaps = 20/119 (16%)
Query: 369 EDLIQVIGQDVFESMKHFYEFGL-SEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
E L +I + + G ++ D F S Y + D+ H
Sbjct: 263 EQLAALIATH--NPLIDYIRHGREADALDPNLYFSSAWYNSIHADVHAA----GMLPLHH 316
Query: 426 YITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
YI HG EGR+ F L Y SH+D+ HF G EGR
Sbjct: 317 YIHHGAAEGRSTGPLFDGLFYRKSHDDV----------TGDPLRHFLEVGAAEGRVAIP 365
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 56/162 (34%), Gaps = 33/162 (20%)
Query: 410 DLRNVFGSDRGAAARHYITHGVKEG-RNPDA-FKALEYIASHEDLINAFADAPDLVQVGK 467
D + YI HG + +P+ F + Y + H D+ A
Sbjct: 262 DEQLAALIATHNPLIDYIRHGREADALDPNLYFSSAWYNSIHADVHAAGMLP-------L 314
Query: 468 DHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR------ 519
H+ + G EGR FD Y S+DD+ G RH++ G EGR
Sbjct: 315 HHYIHHGAAEGRSTGPLFDGLFYRKSHDDV-------TGDPLRHFLEVGAAEGRVAIPVS 367
Query: 520 ---------NPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
P F IA E + A A+ PD V+ D
Sbjct: 368 RPRYETGDERPRRFYRHFDIAREEAFLRAMAELPDDVRQRAD 409
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 18/103 (17%)
Query: 505 AAARHYITHGV-KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
YI HG + +P+ F + Y + H D+ A H+ + G EG
Sbjct: 273 NPLIDYIRHGREADALDPNLYFSSAWYNSIHADVHAAGMLP-------LHHYIHHGAAEG 325
Query: 563 RS--ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
RS F+ Y S+DD+ +H++ G EGR
Sbjct: 326 RSTGPLFDGLFYRKSHDDVTGD-------PLRHFLEVGAAEGR 361
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 34/95 (35%), Gaps = 12/95 (12%)
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 528
+ G E + + Y Y+ + + HYI HG EGR+ F L
Sbjct: 278 YIRHGR-EADALDPNLYFSSAWYNSIHADVHAAGMLPLHHYIHHGAAEGRSTGPLFDGLF 336
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
Y SH+D+ D HF G EGR
Sbjct: 337 YRKSHDDVT---GDP-------LRHFLEVGAAEGR 361
Score = 42.8 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 8/115 (6%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGK---DHFSNFGYEEGRSI-TFNPDLYL- 573
R P A I + D D A + GR +P+LY
Sbjct: 236 RAPGAPSHEPVIQTLVDAAGLGVGPVDEQLAALIATHNPLIDYIRHGREADALDPNLYFS 295
Query: 574 -TSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG--ISGMQFKSVMNLSEKSRDK 625
Y+ + + HYI HG EGR+ G G+ ++ + +
Sbjct: 296 SAWYNSIHADVHAAGMLPLHHYIHHGAAEGRSTGPLFDGLFYRKSHDDVTGDPLR 350
>gi|23954242|emb|CAD42039.1| HlyA protein [Escherichia coli]
Length = 1024
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 15/142 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS D+ G ++ + GND G G DT +
Sbjct: 729 DKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQL----YGGDGNDK 784
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHF 386
++L+ + D+ N +++L + L G D+ +
Sbjct: 785 LTGGVGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDL 841
Query: 387 YEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 842 LKGGYGN------DIYRYLSGY 857
Score = 37.8 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 41/216 (18%)
Query: 193 KIYGAPKGSL------GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++YG + +Y + K + + Y +GGD G + + N
Sbjct: 757 RLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGD--------GDDELQVQGN 808
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN----------- 295
+ + + + G + N + + + G GND++ G N+++ SG
Sbjct: 809 SLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGK 868
Query: 296 ------------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--V 341
DV G D Y A + I +N I + E + +S+ +
Sbjct: 869 DDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLSIG-HKNGITFRNWFEKESGDISNHQI 927
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
E++ F + EY S V G+
Sbjct: 928 EQI-FDKDGRVITPDSLKKAFEYQQSNNQANYVYGE 962
>gi|83745827|ref|ZP_00942884.1| Hemolysin-type Calcium-binding protein - RTX toxin [Ralstonia
solanacearum UW551]
gi|207739787|ref|YP_002258180.1| hemolysin-type calcium-binding protein-rtx toxin [Ralstonia
solanacearum IPO1609]
gi|83727517|gb|EAP74638.1| Hemolysin-type Calcium-binding protein - RTX toxin [Ralstonia
solanacearum UW551]
gi|206593169|emb|CAQ60075.1| probable hemolysin-type calcium-binding protein-rtx toxin
[Ralstonia solanacearum IPO1609]
Length = 449
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 67/210 (31%), Gaps = 34/210 (16%)
Query: 194 IYGA-PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
IYG S+G + + + GG L+ S+
Sbjct: 263 IYGTVNSDSMGGTVTPGGADLNQDKYNLGGWFLGGI----------------LDLGLDSN 306
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ GY +N IA V GND + G + N+ + G+D G G D
Sbjct: 307 LYGYLQN-GIAY-------VAGDGNDKITGTNRNDALYGGDGDDTLLGGVGNDMLAGGNG 358
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV------ERLRFADQCIDSVNVKQRSI---LE 363
Y I ++ DA+ Q D+ L I + +
Sbjct: 359 FDSYIIDAQSGNDVIVDADGLGQIVFGDIPLTGVGRLLAQTSSSILWSEALSSGLEVRYD 418
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
Y+ +DL +G + ++++F + L
Sbjct: 419 YSQKTKDLTITVGNESSVTVRNFEDGALGN 448
>gi|207728296|ref|YP_002256690.1| putative hemolysin-type calcium-binding protein [Ralstonia
solanacearum MolK2]
gi|206591542|emb|CAQ57154.1| putative hemolysin-type calcium-binding protein [Ralstonia
solanacearum MolK2]
Length = 662
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 8/97 (8%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L+ S++ GY +N IA V GND +IG + N+ + G+D G G
Sbjct: 299 LDLGLDSNLYGYLQN-GIAY-------VAGDGNDKIIGTNRNDALYGGDGDDTLLGGVGN 350
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
D Y I + ++ DA+ Q V
Sbjct: 351 DMLAGGNGFDSYIIDAQSGSDVIVDADGLGQIVFGGV 387
>gi|125554704|gb|EAZ00310.1| hypothetical protein OsI_22327 [Oryza sativa Indica Group]
Length = 371
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 57/203 (28%), Gaps = 49/203 (24%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD--- 78
W + + T + S D L+ V A WS L F E + +D
Sbjct: 159 RWPRSRTTLRYAITATSQTSIDRATLSK----VFASAFARWSAATTLNFTEAASAADADI 214
Query: 79 -IKFISSNNG----YVCTPRYDSRYFMEIN-----------FDKADVWRYGIGKGTILSH 122
I F ++G + + F N DV R L
Sbjct: 215 TIGFYGGDHGDGEAFDGPLGTLAHAFSPTNGRLHLDASEAWVAGGDVTRASSNAAVDLES 274
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A+HEIGH LGL H + + S+M S
Sbjct: 275 VAVHEIGHILGLGHSSAAD-------------------SIM-------FPTLTSRTKKVN 308
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN 205
D+ +Q +YG G
Sbjct: 309 LATDDVAGIQGLYGNNPNFKGVT 331
>gi|119486148|ref|ZP_01620208.1| hypothetical protein L8106_17432 [Lyngbya sp. PCC 8106]
gi|119456639|gb|EAW37768.1| hypothetical protein L8106_17432 [Lyngbya sp. PCC 8106]
Length = 1010
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 12/147 (8%)
Query: 200 GSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
L N I + I GDDL+ G DLN S + G
Sbjct: 824 NDLDNAIIGFDDSNDVINGQGGNDIIAGLSGDDLIRG-GDGDDVLRGDLNERSPGGLEG- 881
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N T+ + + G GND + G+ ++ + +G+D+ +G G DT
Sbjct: 882 -GNDTLIGGEGNDRIGGKGGNDQLFGSEGDDQLYGDAGDDLLNGGLGNDTLQGD------ 934
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + A D + D E
Sbjct: 935 DLSGAQGSDTFVLAEGQGIDTIIDFEI 961
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 37/134 (27%), Gaps = 2/134 (1%)
Query: 268 IESVVGS--SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ + NDV+ G N++ SG+D+ G G D N
Sbjct: 826 LDNAIIGFDDSNDVINGQGGNDIIAGLSGDDLIRGGDGDDVLRGDLNERSPGGLEGGNDT 885
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ + ++L ++ +L + L S
Sbjct: 886 LIGGEGNDRIGGKGGNDQLFGSEGDDQLYGDAGDDLLNGGLGNDTLQGDDLSGAQGSDTF 945
Query: 386 FYEFGLSEGRDITF 399
G I F
Sbjct: 946 VLAEGQGIDTIIDF 959
>gi|15485210|emb|CAC67456.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 26/207 (12%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNT 247
++YG G++ Q + + G+D +D + G G K
Sbjct: 598 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLG 649
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++S+ + + +H IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 650 KGFASLMDEPETSNVLRH--IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDDVL 707
Query: 308 FYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S ++ + + D + + +N
Sbjct: 708 LGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAGADQ 763
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 764 LWFARQGNDLEIRILGTDDALTVHDWY 790
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 154 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 213
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 214 DLGVWSNQLDGGAGVDTVKY 233
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+++ G + T+ + + G GND++ G++ N+ + G+D +G +G D
Sbjct: 416 DAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND- 474
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHK 334
+F P+ + + R + D ++
Sbjct: 475 WFGQTPAREHDVLRGGAGVDTVDYSQAG 502
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 23/157 (14%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN----------- 295
++ G + + + + + G +GND + G ++ +GN
Sbjct: 425 QGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREH 484
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY------------DANEHKQDFLSDVER 343
DV G +G+DT Y + + + +A D +S +E
Sbjct: 485 DVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIEN 544
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + Q ++L + L G DV
Sbjct: 545 VVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVL 581
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD V R + Y S
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYYDSV 398
Query: 369 EDLIQVIGQDVFESM 383
+ VIG + + +
Sbjct: 399 RSVENVIGTSMKDVL 413
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 20/152 (13%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D + + + DL+
Sbjct: 323 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEG 382
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D G G D F
Sbjct: 383 -WVRKAARRGMGYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLF 441
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + +A D L
Sbjct: 442 GGDGNDML----YGDAGNDTLYGGLGDDTLEG 469
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 14/144 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 207 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 266
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D
Sbjct: 267 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLD-- 323
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
+Y + I +E D +
Sbjct: 324 TLYGEDGNDIFLQDDETVSDDIDG 347
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 448 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 501
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 502 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 559
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 560 ANVLRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 618
Query: 328 YDANEHKQDF 337
D +
Sbjct: 619 LDGGDGNDTV 628
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 165 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 224
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 225 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 284
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 285 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 316
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 159 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 218
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 219 SNQLDGGAGVDTV 231
>gi|313200801|ref|YP_004039459.1| outer membrane adhesin-like protein [Methylovorus sp. MP688]
gi|312440117|gb|ADQ84223.1| outer membrane adhesin like proteiin [Methylovorus sp. MP688]
Length = 1543
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 5/172 (2%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D GD I K + + T + +I G I + ++G GND + G+
Sbjct: 1340 DKDGDTAGSTVTINVDKTDVQVGTTAGETITGSNHPDLIMGRDGNDILIGGGGNDRLYGD 1399
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ N+ +GND+ G +G+DTF + + + +K S ++
Sbjct: 1400 NGNDTLIGGAGNDILSGGAGVDTFKWNLADAGTP----GTPAVDTITDFNKASVASGGDK 1455
Query: 344 LRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQDVFESMKHFYEFGLSEG 394
L D + ++ L + S D +I + F H + G
Sbjct: 1456 LDLRDLLTGENSGNLQNYLHFEKSGSDTIIHISSTGGFSGDSHTVGAAFNSG 1507
>gi|197103956|ref|YP_002129333.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
gi|196477376|gb|ACG76904.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
Length = 636
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 9/185 (4%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GN+ +I G+D + G N L+ +I
Sbjct: 415 TSGSGNDTIDAGNGNNVISAGDGANSITAGTGNDNI----TSGSGNDTILSGTGADTIDA 470
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +I + + SG DV++G N+V +GNDV G G D A +
Sbjct: 471 GDGANSITADAGNDVITTGSGADVILGGDGNDVINSGAGNDVITGGLGKDVITGGAGADT 530
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ I+ ++ + + +D+ +RL FA + S +Y A+ +I
Sbjct: 531 F-IFGNGDSGVTAGGIDQIRDW-EATDRLDFAGAAATGTTYVETSAADYDAAKTTADGLI 588
Query: 376 GQDVF 380
G +
Sbjct: 589 GTGID 593
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 68/205 (33%), Gaps = 24/205 (11%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDD-----LLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ +Y T+ G D + ++ GG + + + + ++I
Sbjct: 304 DQLYGEAGADSLVGGDGNNTLIGGDGSDSITGGTGNDSVSGGNGSDVIVAGDGVNTIDAG 363
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------NVFFESSGNDVFDGSSGLDTF 307
E N +I + + + +GND V+ N+ N N +GND SG DT
Sbjct: 364 EGNNSITAGSGSDVITAGAGNDTVVANNGNNSVSVGDGANSVTAGTGNDTITSGSGNDTI 423
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQ-----DFL---SDVERLRFADQCIDSVNVKQR 359
+ + N+I N++ D + + + + D
Sbjct: 424 DAGNGNNVISAGDGANSITAGTGNDNITSGSGNDTILSGTGADTIDAGDGANSITADAGN 483
Query: 360 SILEYTASYEDLIQVIGQDVFESMK 384
++ + + ++ G DV S
Sbjct: 484 DVITTGSGADVILGGDGNDVINSGA 508
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 60/192 (31%), Gaps = 18/192 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+LG++ +Y G D +L+GG N + + SI G
Sbjct: 289 NGNLGDDT------LTGGSGNDQLYGEAGAD----SLVGGDGNNTLIGGDGSDSITGGTG 338
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N +++ + +V G + + NN SG+DV +G DT + +
Sbjct: 339 NDSVSGGNGSDVIVAGDGVNTIDAGEGNNSITAGSGSDVITAGAGNDTVVANNGNNSVSV 398
Query: 319 YRF--------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
N I + D + + D + + +
Sbjct: 399 GDGANSVTAGTGNDTITSGSGNDTIDAGNGNNVISAGDGANSITAGTGNDNITSGSGNDT 458
Query: 371 LIQVIGQDVFES 382
++ G D ++
Sbjct: 459 ILSGTGADTIDA 470
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 57/170 (33%), Gaps = 8/170 (4%)
Query: 222 IYDSGGDDLLDLTLI------GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
I+ G+D + G + I + + G + +A + +VG
Sbjct: 214 IFGEDGNDTVTANGGTVVVSGGNGADSITATGAAVNLQGNIGDDTLVATGAGNDILVGGQ 273
Query: 276 GNDVVIGNSANNV-FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND++ ++ N + G+D G SG D + A + N +I D ++
Sbjct: 274 GNDILTASTGGNEYLNGNLGDDTLTGGSGNDQLYGEAGADSLVGGDGNNTLIGGDGSDSI 333
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + V + ++ + G DV +
Sbjct: 334 TGG-TGNDSVSGGNGSDVIVAGDGVNTIDAGEGNNSITAGSGSDVITAGA 382
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 66/211 (31%), Gaps = 19/211 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSI 253
G+LG++ ++ + +Q +Y G+D + DL + I + I
Sbjct: 158 GNLGDD--SLDGSAGSATTVQWLYGGQGNDTVVGGAGADLLFGNMGNDSIGGGGGNDQ-I 214
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVI---------GNSANNVFFE-SSGNDVFDGSSG 303
G + N T+ + V G +G D + GN ++ +GND+ G G
Sbjct: 215 FGEDGNDTVTANGGTVVVSGGNGADSITATGAAVNLQGNIGDDTLVATGAGNDILVGGQG 274
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D Y + + + + + + L D + +
Sbjct: 275 NDILTASTGGNEYLNGNLGDDTLTGGSGNDQLYGEAGADSLVGGDGNNTLIGGDGSDSIT 334
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + G DV + EG
Sbjct: 335 GGTGNDSVSGGNGSDVIVAGDGVNTIDAGEG 365
>gi|304393444|ref|ZP_07375372.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
gi|303294451|gb|EFL88823.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
Length = 571
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 4/128 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
D+ G + G+ G+DV+ G N+ F +GNDV DG G
Sbjct: 301 DVTDGGSDDAGDMTGGDNGFGG---QDFFGTDGDDVLTGGDGNDGFLGYAGNDVIDGGEG 357
Query: 304 LDTFFYYAPSYLYKIY-RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ Y S Y+ + ++ V N D L +V+ + FA + + I
Sbjct: 358 YNQVDYTGSSTDYQAGIAADGSVTVIKPNGEGTDTLVNVDGIYFAGDDVWKQVSELGPID 417
Query: 363 EYTASYED 370
D
Sbjct: 418 AGEEQPVD 425
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+ NDV+ G N+ F S+GND DG G + Y S Y + + + V N
Sbjct: 192 FGTDDNDVLTGGEGNDGFLGSAGNDTIDGGEGYNQIDYAGSSSDYSVTLDGDTLTVVKPN 251
Query: 332 EHKQDFLSDVERLRF 346
D +S+V + F
Sbjct: 252 GEGTDTVSNVSGVYF 266
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G+ +DV+ G ++ F E+ GND DG +G + Y S Y I R + + V
Sbjct: 54 EDIFGTDSDDVLTGKEGDDGFLETKGNDTVDGGAGRNQIDYLGSSSEYAITRDGDTLTVV 113
Query: 329 DANEHKQDFLSDVERLRF 346
N D +++V + F
Sbjct: 114 KLN-GGTDTVTNVSGVYF 130
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+ V G + ++ F SG+ V DG G D S Y + + ++
Sbjct: 472 GSSAVYGYGSADLIFAGSGDAVLDGGEGFDVMHANGASTDYTFNANSDGSVTASSDVDGT 531
Query: 336 DFLSDVERLRFADQCI 351
D + D+E + FA
Sbjct: 532 DTMVDMEAVYFAGDDQ 547
>gi|167524673|ref|XP_001746672.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774942|gb|EDQ88568.1| predicted protein [Monosiga brevicollis MX1]
Length = 1525
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 80/276 (28%), Gaps = 41/276 (14%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE-----VARWA--LGEWS-KVVDL- 68
D W + L D + Q+ AR A W V +
Sbjct: 145 TSDSAWGAF-------SAYAFSLDNDFESFSSAEQDFITSVWARVAEDFAPWQIDVTTIE 197
Query: 69 --TFEETSIHSDIKFIS------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
TF + H+ I + S G T Y + + +
Sbjct: 198 PATFTPFTAHALITRTTTTTNEYMPYGSLSIGGVAYTDVYGYSNYQTVYAPALIYYNRLA 257
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSM 172
+ + HE+GH GL+H G+ N Y YG D D + + +M Y+
Sbjct: 258 NLASFTAEATSHEVGHNFGLLHDGAGNSTY--YGGDRDPTDPTSWGPIMGTGYYNSVTQW 315
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG----D 228
+ T + D+ + + G+ + + SG
Sbjct: 316 ENGENIVNPTNLEDDVAIIGSLVPVRVDEAGDTPATAASCTRLDSYNA--VASGIISSRT 373
Query: 229 DLLDLTLIGGVKNYIDLNTESW-SSIGGYEKNMTIA 263
D+ + + + I + + W S+ N+ I
Sbjct: 374 DVDVWSFVASASSTITVLAKPWYSATETAGNNLDIG 409
>gi|110643969|ref|YP_671699.1| hemolysin A [Escherichia coli 536]
gi|110345561|gb|ABG71798.1| hemolysin A [Escherichia coli 536]
Length = 1024
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 15/142 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS D+ G ++ + GND G G DT +
Sbjct: 729 DKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQL----YGGDGNDK 784
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHF 386
++L+ + D+ N +++L + L G D+ +
Sbjct: 785 LTGGVGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDL 841
Query: 387 YEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 842 LKGGYGN------DIYRYLSGY 857
Score = 37.8 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 41/216 (18%)
Query: 193 KIYGAPKGSL------GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++YG + +Y + K + + Y +GGD G + + N
Sbjct: 757 RLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGD--------GDDELQVQGN 808
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN----------- 295
+ + + + G + N + + + G GND++ G N+++ SG
Sbjct: 809 SLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGK 868
Query: 296 ------------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--V 341
DV G D Y A + I +N I + E + +S+ +
Sbjct: 869 DDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLSIG-HKNGITFRNWFEKESGDISNHQI 927
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
E++ F + EY S V G+
Sbjct: 928 EQI-FDKDGRVITPDSLKKAFEYQQSNNQANYVYGE 962
>gi|296206497|ref|XP_002750233.1| PREDICTED: matrix metalloproteinase-23 [Callithrix jacchus]
Length = 390
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 32/142 (22%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDI 79
W ++ + Y+ + LS + +A A WS V +F E + SD+
Sbjct: 87 RWDHFNLTYRILSFPRNLLSP-----QETRRALA-AAFRMWSDVSPFSFREVAPEQPSDL 140
Query: 80 KFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG------ 117
+ + T +F I+FD ++ W G +
Sbjct: 141 RIGFYPINHTDCLVSTLHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGV 200
Query: 118 --TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 201 WLTDLVHVAAHEIGHALGLMHS 222
>gi|284054297|ref|ZP_06384507.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 164
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 7/139 (5%)
Query: 203 GNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ ++ ++ GDD L GG N I G E N
Sbjct: 28 GDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYL----FGGPGNDTLFGELGDDVIYGGEGN 83
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I ++ +S+VG SGND + G ++ G+D+ G G D + +
Sbjct: 84 NFILGNSGDDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRGNDILYTGSGFNSLTGG 143
Query: 320 RFENAIIVYDANEHKQDFL 338
+ ++ Q +
Sbjct: 144 AGSDLFVIGVGFNGGQTDV 162
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 8/154 (5%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
IG ++ + L T I G E + T+ +++ GN+++ G ++ F GN
Sbjct: 6 IGTSESDLLLGTSEDDEIQGLEGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGN 65
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDVE--RLRFAD 348
D G G D + + +++I+ N+ D L E L F D
Sbjct: 66 DTLFGELGDDVIYGGEGNNFILGNSGDDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGD 125
Query: 349 QCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFE 381
+ D + + L A + + +G + +
Sbjct: 126 RGNDILYTGSGFNSLTGGAGSDLFVIGVGFNGGQ 159
Score = 38.2 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 8/116 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-----YLYKIYRFENAI 325
++G+S +D+++G S ++ G+D G G DT F + Y F
Sbjct: 5 IIGTSESDLLLGTSEDDEIQGLEGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPG 64
Query: 326 IVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E D + E + V + + LI G D
Sbjct: 65 NDTLFGELGDDVIYGGEGNNFILGNSGDDSIVGGSGNDTIYGGQGSDTLIGGEGDD 120
>gi|159026443|emb|CAO88955.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1267
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 225 SGGDDLLDLTLIGGVKNYI---DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ G + +D T + G + NT +S+ N+ I + +++ G++GNDV+I
Sbjct: 1100 NSGIETIDGTGVTGKVTIVGDWSDNTLDFSNTAFVGNNIQINGYWGNDNITGTTGNDVII 1159
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + SG D+ G G D + I+ + I ++ DF + +
Sbjct: 1160 GGGGEDKLNGGSGEDILIGGLGSDQLTGGEGPDRF-IFNTVDEIGQGANQDNILDFNTGL 1218
Query: 342 ERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + +S+N +S AS
Sbjct: 1219 DTIDISGIDANSLNAGNQSFTFIGAS 1244
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 35/102 (34%), Gaps = 26/102 (25%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ TI G D+ D + V N I +N
Sbjct: 733 TIDGTGVTGKVTIVGDGSDNTFDFSNTAFVGNNIQIN----------------------- 769
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G GND + GN+ANNV G+D +G +G D + Y
Sbjct: 770 ---GYWGNDNITGNAANNVIIGGGGDDKLNGGNGSDQYVYTG 808
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G + +D T + G + WS N + + + G GND + G +
Sbjct: 852 NSGIETIDGTGVTGKVTIV----GDWSDNTLDFSNTAFVGNNI--QINGYWGNDNITGTT 905
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYA 311
N+V G+D +G +G D + Y
Sbjct: 906 GNDVIIGGGGDDKLNGGNGSDQYVYTG 932
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 9/161 (5%)
Query: 186 SDIVAVQKIYGAPKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+D Q +G + + +Y I +D+ + + GD L + NY
Sbjct: 424 NDGATTQY-FGKNLVNTVADGLYHIGFNIQDNRLL----NEDGDANARLNDVSSWLNYFY 478
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L I G TI + E ++G GNDV+ G +++ G+D G G
Sbjct: 479 LQKTI---IYGDNSGDTITGTNLAEHLMGYGGNDVLSGGDGDDLIDGDWGSDTLSGGVGN 535
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
D + A + + V +
Sbjct: 536 DLLYGGADNDQLDGGEGSDTYYVSGNLAGGWSSFQGYDIYT 576
>gi|281354520|gb|EFB30104.1| hypothetical protein PANDA_004219 [Ailuropoda melanoleuca]
Length = 404
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 68/190 (35%), Gaps = 49/190 (25%)
Query: 50 NAQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY------- 98
+ + R A WS+V L F E + + DIK ++ PR
Sbjct: 28 EQRHILRLAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRVFDGSGQEFAHA 87
Query: 99 --FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+I+FD + + G L A+HEIGH LGL P +Y G
Sbjct: 88 WRLGDIHFDDDEHFTPPTSDAGISLLKVAVHEIGHVLGL--PHTYRTG------------ 133
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMV----SDIVAVQKIYGAPKGSLGNNIYKIEV 211
S+M PM SD A+QK+YG+ +GS + +
Sbjct: 134 -----SIM-----------QPNYIPQEPMFELDWSDRKAIQKLYGSCEGSF-DTAFDWIR 176
Query: 212 QQKDSPFIQT 221
++++ T
Sbjct: 177 KERNQHGAVT 186
>gi|110644662|ref|YP_672392.1| hemolysin A [Escherichia coli 536]
gi|110346254|gb|ABG72491.1| hemolysin A [Escherichia coli 536]
Length = 1024
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 15/142 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS D+ G ++ + GND G G DT +
Sbjct: 729 DKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQL----YGGDGNDK 784
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHF 386
++L+ + D+ N +++L + L G D+ +
Sbjct: 785 LTGGVGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDL 841
Query: 387 YEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 842 LKGGYGN------DIYRYLSGY 857
Score = 37.8 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 41/216 (18%)
Query: 193 KIYGAPKGSL------GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++YG + +Y + K + + Y +GGD G + + N
Sbjct: 757 RLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGD--------GDDELQVQGN 808
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN----------- 295
+ + + + G + N + + + G GND++ G N+++ SG
Sbjct: 809 SLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGK 868
Query: 296 ------------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--V 341
DV G D Y A + I +N I + E + +S+ +
Sbjct: 869 DDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLSIG-HKNGITFRNWFEKESGDISNHQI 927
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
E++ F + EY S V G+
Sbjct: 928 EQI-FDKDGRVITPDSLKKAFEYQQSNNQANYVYGE 962
>gi|255264748|ref|ZP_05344090.1| hemolysin-type calcium-binding protein [Thalassiobium sp. R2A62]
gi|255107083|gb|EET49757.1| hemolysin-type calcium-binding protein [Thalassiobium sp. R2A62]
Length = 447
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 4/157 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I GDD + + +L ++ S G N I+
Sbjct: 76 GGNDAADGGTGNDRILGGDGDDTIAGGDSDDDLDG-NLGADTLS---GGAGNDVISGGFG 131
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G++G+D + G + +V GND +G G D + ++ I
Sbjct: 132 QDMLSGNAGDDTLDGGNNADVLTGGGGNDTLNGGEGNDDLTGRTGNDTIMGGAGDDKIYD 191
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ N D F I V +IL
Sbjct: 192 RNGNNTLDGGAGDDMITGFGGVQIVDGGVGNDTILTG 228
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 13/152 (8%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ GDD LD GG + ++ G E N + T ++++G +G+D + +
Sbjct: 138 NAGDDTLD----GGNNADVLTGGGGNDTLNGGEGNDDLTGRTGNDTIMGGAGDDKIYDRN 193
Query: 285 ANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
NN +G+D+ DG G DT + ++I + ++
Sbjct: 194 GNNTLDGGAGDDMITGFGGVQIVDGGVGNDTILTGQGDDIISGGDGNDSIKTKEGDDDIN 253
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ E A I + +L +
Sbjct: 254 GGDGNDEIEGGAGDDIVNGGDGNDELLGGLGA 285
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 56/200 (28%), Gaps = 19/200 (9%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLL-----DLTLIGGVKNY 242
KIY + + I D G G+D + D + GG N
Sbjct: 184 AGDDKIYDRNGNNTLDG--GAGDDMITGFGGVQIVDGGVGNDTILTGQGDDIISGGDGND 241
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
E I G + N I + V G GND ++G +V GND+ G
Sbjct: 242 SIKTKEGDDDINGGDGNDEIEGGAGDDIVNGGDGNDELLGGLGADVIDGGEGNDLIAGQD 301
Query: 303 GLDTFFYYAPSYLYKIYR-----------FENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G D A + + NA D LS +
Sbjct: 302 GADIMNGGAGNDVLVSIDVPDRTTGIPTLTGNADADELNGGTGDDILSGDANDTLSGGTG 361
Query: 352 DSVNVKQRSILEYTASYEDL 371
V + T + DL
Sbjct: 362 VDQFVVFNDGSQGTTTITDL 381
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 38/154 (24%), Gaps = 25/154 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN------------------NVFFESS 293
SI N + ++ G +GND ++G + + +
Sbjct: 62 SINSLAGNDEVFLRGGNDAADGGTGNDRILGGDGDDTIAGGDSDDDLDGNLGADTLSGGA 121
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQC 350
GNDV G G D A + + D L+ E L
Sbjct: 122 GNDVISGGFGQDMLSGNAGDDTLDGGNNADVLT----GGGGNDTLNGGEGNDDLTGRTGN 177
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + L G D+
Sbjct: 178 DTIMGGAGDDKIYDRNGNNTLDGGAGDDMITGFG 211
>gi|241758688|ref|ZP_04756801.1| bifunctional hemolysin/adenylate cyclase [Neisseria flavescens
SK114]
gi|241320896|gb|EER57109.1| bifunctional hemolysin/adenylate cyclase [Neisseria flavescens
SK114]
Length = 353
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 33/98 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G I +++ G + D + G + GND +G SG D
Sbjct: 90 IYGGNGADVIYAGAGNDTIYGDADGDSLYGEEGKDYLQGGDGNDYLNGGSGADIMRGGDG 149
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ +Y + ++ +I Y D + V D
Sbjct: 150 NDVYFVDDADDQVIEYGNLNGGIDTVRTVIDYTLTDNV 187
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 6/140 (4%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-LTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN++Y V D I+ +GG D + + N +L + ++ G ++
Sbjct: 149 GNDVY--FVDDADDQVIEYGNLNGGIDTVRTVIDYTLTDNVENLFLQGMQNLNGTGNSLN 206
Query: 262 IAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI- 318
+ G +G+D ++G N+ GND+ G +G DT+F+ I
Sbjct: 207 NNIEGNGGNNHLYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKGYGHDTIR 266
Query: 319 YRFENAIIVYDANEHKQDFL 338
N +++ D L
Sbjct: 267 EESGNDTLLFGKGIAASDVL 286
>gi|212633290|ref|YP_002309815.1| VCBS [Shewanella piezotolerans WP3]
gi|212554774|gb|ACJ27228.1| VCBS [Shewanella piezotolerans WP3]
Length = 2529
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 4/148 (2%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ +D N+ S + + A ++ + G D ++G N++ F GND
Sbjct: 2313 AQQTNVDANSVSVQDVHAFIT----ANASLFDVAKLKDGADDLVGGIGNDILFGQGGNDT 2368
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G +G DT E+ + + D + A+ +D ++
Sbjct: 2369 LIGGTGEDTMIGGLGDDTMTGGEGEDTFVWSAGSVDGTDTTDHITDFNLAEDKLDLSDIL 2428
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKH 385
Q + + Y G
Sbjct: 2429 QGDSINELSQYISFTDENGSTSINIDTD 2456
>gi|24528030|emb|CAD33759.1| hemolysin A [Escherichia coli]
Length = 1024
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + + G GND + G + ++ + GND G G +
Sbjct: 740 FHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDG 799
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASY 368
++ A V + + L + I Y + Y
Sbjct: 800 DDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 15/142 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS D+ G ++ + GND G G DT +
Sbjct: 729 DKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQL----YGGDGNDK 784
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHF 386
++L+ + D+ N +++L + L G D+ +
Sbjct: 785 LTGGVGNNYLNGGD---GDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDL 841
Query: 387 YEFGLSEGRDITFDSYLYLGSY 408
+ G D Y YL Y
Sbjct: 842 LKGGYGN------DIYRYLSGY 857
Score = 37.8 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 41/216 (18%)
Query: 193 KIYGAPKGSL------GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++YG + +Y + K + + Y +GGD G + + N
Sbjct: 757 RLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGD--------GDDELQVQGN 808
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN----------- 295
+ + + + G + N + + + G GND++ G N+++ SG
Sbjct: 809 SLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGK 868
Query: 296 ------------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--V 341
DV G D Y A + I +N I + E + +S+ +
Sbjct: 869 DDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLSIG-HKNGITFRNWFEKESGDISNHQI 927
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
E++ F + EY S V G+
Sbjct: 928 EQI-FDKDGRVITPDSLKKAFEYQQSNNQANYVYGE 962
>gi|331661873|ref|ZP_08362796.1| putative RTX family exoprotein [Escherichia coli TA143]
gi|331060295|gb|EGI32259.1| putative RTX family exoprotein [Escherichia coli TA143]
Length = 582
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y + T +GG D++D L T + SS
Sbjct: 358 ATAGTDTYDGSGGWVYNSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 411
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND + G+S +N GND + G+ G DT Y +
Sbjct: 412 FNTSTFTNIEGISGSNFNDTLTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 471
Query: 319 YRFENAII 326
+ ++
Sbjct: 472 GGNGSDVV 479
>gi|329849060|ref|ZP_08264088.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844123|gb|EGF93692.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1854
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 6/175 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N+ + + +GND V + + +GND +G +G DT Y
Sbjct: 766 GTGNGLNNILVGNGANNR-LDAGAGNDSVTAGAGADWVSGDAGNDTLEGGAGRDTVSYAG 824
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S + A + D LS E L + + + +++ AS + +
Sbjct: 825 ASGGVTVSLSLTASQATGGS--GSDKLSGFENLTGSAFADNLTGNEVGNVIIGGASNDTM 882
Query: 372 IQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGAAA 423
+ G D +++ + G D F S Y L + + GSD A
Sbjct: 883 SGLTGNDSYYVDAVSDAIVELANAGSDAVFSSVSYVLADNLEALTLTGSDHLEAT 937
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 6/164 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ G+D + + + GG + I E+++GS+ ND +
Sbjct: 1448 LHGVAGNDTVSYSDAAAGVTVSLAVNNARQMTGGAGSDFLIGF----ENLIGSAFNDRLT 1503
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G+S +NV + +G D G G DT++ + E + + + V
Sbjct: 1504 GDSGDNVIYGGAGGDRMVGGLGNDTYYVDSAGDSVGENHLEGTDTIISSVSYSL-LGRAV 1562
Query: 342 ERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E L + + +++ + L G D+ +
Sbjct: 1563 EILTLTGAGNLAGIGNSLNNLMTGNSGNNTLEGAAGNDMLDGGA 1606
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 10/171 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV- 272
+ T+ GGDD + G V +++ + + N+ IES+
Sbjct: 955 NGAAGNDTLAGQGGDDTYVVDGSGDVVTE-NVDEGTDTVRASVNHNL----GLHIESLTL 1009
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
SGN GN N+ + GN+ DG +G DT Y + ++ ++ +
Sbjct: 1010 TGSGNLSANGNGLANILTGNGGNNALDGGAGDDTLAGGLGDDTYVVDS--SSDVIVENAS 1067
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D + + AD + + Y + G +
Sbjct: 1068 EGTDVVLASQSYTLADHVENLTLTGTADL--YGTGNAQGNTITGTSGNNVL 1116
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 58/172 (33%), Gaps = 6/172 (3%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
T+ G D + G + L+ + + GG + + E+
Sbjct: 800 DWVSGDAGNDTLEGGAGRDTVSYAGASG-GVTVSLSLTASQATGGSGSDKL----SGFEN 854
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ GS+ D + GN NV + ND G +G D+++ A S + V+ +
Sbjct: 855 LTGSAFADNLTGNEVGNVIIGGASNDTMSGLTGNDSYYVDAVSDAIVELANAGSDAVFSS 914
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + L +D +++ + L A + L G D
Sbjct: 915 VSYVLADNLEALTLTGSDH-LEATGNAAANGLTGNAGHNLLNGAAGNDTLAG 965
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 55/180 (30%), Gaps = 21/180 (11%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + +G G+D V G + + ++G+D G G D A +
Sbjct: 1396 AGSGNDHFLGGLGSDKVYGGAGADTLSGAAGHDTLIGMEGDDLVLGGAGDDDLHGVAGND 1455
Query: 324 AIIVYDANEH-----------------KQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ DA DFL E L + +++ A
Sbjct: 1456 TVSYSDAAAGVTVSLAVNNARQMTGGAGSDFLIGFENLIGSAFNDRLTGDSGDNVIYGGA 1515
Query: 367 SYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAA 422
+ ++ +G D +S EG D S Y LG ++ + G+ A
Sbjct: 1516 GGDRMVGGLGNDTYYVDSAGDSVGENHLEGTDTIISSVSYSLLGRAVEILTLTGAGNLAG 1575
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N T + + + G GND + GN N+ + G DV G G D + A
Sbjct: 13 TYNGTPGNDTYSGTVNADDIHGLLGNDSLSGNGGNDTLEGNGGADVMSGGDGDDLLYASA 72
Query: 312 PSYLYKI--YRFENAIIVYDANEHKQDFLSD 340
P Y+ Y ++ + D L+
Sbjct: 73 PPGAYQTPYYDAVPYVVPVLDRDAIADSLTG 103
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 11/163 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
IY G+D + + + GG + A ++ G +G+D +
Sbjct: 646 IYAGAGNDTVQMMETYDDNA----------AYGGDGNDDMKAAADWASTLYGDAGDDTLT 695
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + N+ + +G D G G D + + + + A VY + + ++
Sbjct: 696 GGARNDHLYGGAGKDSMAGGGGNDRYGVDSVDDVVIEEANKGADEVYSSISYVLGANLEI 755
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L ++ ID +IL + L G D +
Sbjct: 756 LSLDGSND-IDGTGNGLNNILVGNGANNRLDAGAGNDSVTAGA 797
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 55/163 (33%), Gaps = 8/163 (4%)
Query: 227 GDDLL--DLTLIGGVKNYIDLNTESWSSIG----GYEKNMTIAQHTVIESVVGSSGNDVV 280
GDD D +N+++ SS+ G I + SV G+ N+ +
Sbjct: 1616 GDDTYYVDNAGDSVGENHLEGTDTIISSVSYSLFGRAVENFIMLGSANLSVTGNGLNNTL 1675
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN+ NN +G+D G G DT++ + +Y + + F
Sbjct: 1676 TGNAGNNALDGGAGSDKMMGGLGDDTYYVDHAQDNVGEAHLQGTDTIYSSVTYSL-FGRA 1734
Query: 341 VERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
VE L ++ + L A L G DV
Sbjct: 1735 VEILTLTGSANLNGTGNSLANSLTGNAGGNRLDGAGGNDVLTG 1777
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRFENAII 326
G++ + + G S NNV +G D G +G D+ Y N +
Sbjct: 1100 GNAQGNTITGTSGNNVLIGGAGADTLYGGAGNDSLVTNDGPGPTDSDVDYLYGGDGNDTL 1159
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
Y + QD + + D + I D+
Sbjct: 1160 AYASFSQGQDVFDGGDGIDTLDYSDGQLRGSFTGIEILYTGGGDVAA 1206
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ +G+ GND GN + + G D +G S D + AP +YK+ + + I +
Sbjct: 439 TAIGNGGNDTFNGNGGPDTLIGNDGADQLNGGSSDDVLYAAAPFGVYKMPYYYDFIYIAP 498
Query: 330 A--NEHKQDFLSD 340
+ D L+
Sbjct: 499 ILDRDAAADTLTG 511
Score = 44.0 bits (102), Expect = 0.083, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 2/103 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G+D + G+S +V +GND G +G D + + A
Sbjct: 297 LFGDAGHDTLTGSSITDVLDGGAGNDSVTGGAGQDWLTGGGGNDTLTGGDHPADLTGDVA 356
Query: 331 --NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ D+ + L D + S E L
Sbjct: 357 VYSGGITDYQVTEDALTHIITVADLRTGSPDGADKLDRSIEAL 399
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 41/102 (40%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
++T++G ++ I + + G + N + V + N+V+ G++ N+
Sbjct: 1249 NVTVVGTAQDNIIIGNGGNDVLSGGDGNDGLVGRAYFFGVGPLTDNNVLNGDAGNDSLEG 1308
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S GND +G +G D+ S + I V D
Sbjct: 1309 SGGNDTINGGTGDDSITSTYNSGSVDVDPELGGIDVIDGGAG 1350
Score = 42.8 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 73/245 (29%), Gaps = 34/245 (13%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW---SSIGGYEKN 259
G+N+ Q DL + G ++ + +W S +
Sbjct: 523 GDNVDGGADVDTLFISFQAATAGVSFDLSLTSQTIGGGTIQNIESATWIEGSEFDDVIRG 582
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD----------GSSGLDTFFY 309
+I + + G GND ++G S + +GND G G D +
Sbjct: 583 ESIGWGDSSKMIFGLGGNDSLVGGSHTRGVYGGAGNDTLFNNASGPTVAEGGDGDDLIYG 642
Query: 310 ----YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
YA + + E D + AD L
Sbjct: 643 TKRIYAGAGNDTVQMMETYDDNAAYGGDGND-----DMKAAADWASTLYGDAGDDTLTGG 697
Query: 366 ASYEDLIQVIGQDVF-----------ESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRN 413
A + L G+D +S+ ++G D + S Y LG+ ++ +
Sbjct: 698 ARNDHLYGGAGKDSMAGGGGNDRYGVDSVDDVVIEEANKGADEVYSSISYVLGANLEILS 757
Query: 414 VFGSD 418
+ GS+
Sbjct: 758 LDGSN 762
Score = 41.3 bits (95), Expect = 0.58, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 16/137 (11%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEKNM- 260
GN+ D +Y G D + + + DL T S ++++
Sbjct: 338 GNDTLTGGDHPADLTGDVAVYSGGITDYQVTEDALTHIITVADLRTGSPDGADKLDRSIE 397
Query: 261 ------------TIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
I + + G G D+ +G+ N + GND F+G+ G DT
Sbjct: 398 ALQFSEGTYLLDAILAGVGLGGVNFTGDDGADIYVGSEDGNTAIGNGGNDTFNGNGGPDT 457
Query: 307 FFYYAPSYLYKIYRFEN 323
+ ++
Sbjct: 458 LIGNDGADQLNGGSSDD 474
Score = 37.4 bits (85), Expect = 8.8, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + +G + N I ++ G+ G D +IGN + S +DV
Sbjct: 425 DDGADIYVGSEDGNTAIGNG-GNDTFNGNGGPDTLIGNDGADQLNGGSSDDVLY 477
>gi|168705331|ref|ZP_02737608.1| putative Ca binding protein [Gemmata obscuriglobus UQM 2246]
Length = 403
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTESWSSIGGYEKNMT--IAQ 264
I + ++ +QT GG+D + +T + G + + + + G N+T I
Sbjct: 248 INITTTETVVMQT---GGGNDTITVTALAGTGVKSVVMDGGDGDDKLDGSAANVTLQIFG 304
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G S NDV++G N+ G D DG +G DT +
Sbjct: 305 GAGNDTLSGGSKNDVLVGGDGNDTLSGRKGTDTLDGGAGNDTLDDGGKDGAQDVLIGGTG 364
Query: 325 IIVY 328
+
Sbjct: 365 ADTF 368
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 14/117 (11%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+ + + GDD LD + I G N T+
Sbjct: 263 GNDTITVTALAGTGVKSVVMDGGDGDDKLDGSAANVTLQ-----------IFGGAGNDTL 311
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--GSSGL-DTFFYYAPSYLY 316
+ + + +VG GND + G + +GND D G G D + +
Sbjct: 312 SGGSKNDVLVGGDGNDTLSGRKGTDTLDGGAGNDTLDDGGKDGAQDVLIGGTGADTF 368
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 16/132 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTI---- 262
K + + GG+D + + I + L + S + G N TI
Sbjct: 70 TFGAPNKANLQTVIVDAKGGNDSIVIQNSINVLDANGKLAFAANSVLYGGAGNDTIRVLA 129
Query: 263 --------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
AQ + ++V GN + G S ++ GND G SG DTF + +
Sbjct: 130 GGFVGGLPAQGQPLPNIV---GNSTMYGGSGDDFLDSGFGNDTMYGESGNDTFRWLPGTL 186
Query: 315 LYKIYRFENAII 326
+
Sbjct: 187 IDAFDGGGGNDT 198
>gi|126661141|ref|ZP_01732220.1| Polymorphic membrane protein [Cyanothece sp. CCY0110]
gi|126617584|gb|EAZ88374.1| Polymorphic membrane protein [Cyanothece sp. CCY0110]
Length = 210
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND++ G++ N++ +G+D G SG DT + F N +
Sbjct: 35 DTLNGGAGNDILTGDTGNDILNGGTGDDSLYGGSGNDTLTGGVGNDNLIFGDFSNFSTI- 93
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ DF +RL + + + + L
Sbjct: 94 -GIDTITDFTKGSDRLLLSQRTFNQLTRNGDLTL 126
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+V+G+S ND + G + N++ +GND+ +G +G D+ + + + + +I D
Sbjct: 27 NVIGTSFNDTLNGGAGNDILTGDTGNDILNGGTGDDSLYGGSGNDTLTGGVGNDNLIFGD 86
Query: 330 ANEH---KQDFLSDV 341
+ D ++D
Sbjct: 87 FSNFSTIGIDTITDF 101
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 4/103 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ + + G +GND++ G + ++ + SGND G G D +
Sbjct: 27 NVIGTSFNDTLNGGAGNDILTGDTGNDILNGGTGDDSLYGGSGNDTLTGGVGNDNLIFG- 85
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + + D + L + D
Sbjct: 86 ---DFSNFSTIGIDTITDFTKGSDRLLLSQRTFNQLTRNGDLT 125
>gi|222056408|ref|YP_002538770.1| outer membrane adhesin like proteiin [Geobacter sp. FRC-32]
gi|221565697|gb|ACM21669.1| outer membrane adhesin like proteiin [Geobacter sp. FRC-32]
Length = 3904
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 29/87 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E TI + G+ GND + G N+ G+D G G D +
Sbjct: 546 IFGKEGADTITGGEYADRFYGAGGNDAMYGYGGNDYLEGGKGDDTLYGGKGNDILYGGQG 605
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS 339
Y + + D + + +
Sbjct: 606 YDTYIYNIGDGTDTIVDQDNLGRILIR 632
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 5/130 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++ + TI DSG ++ I ++ ++ +K + Q T
Sbjct: 1869 VSLRRTGDDLVLTITDSGDRMVVKNWFWNDTSQVERIQFADGTFWNVDTIKKKVL--QGT 1926
Query: 267 VI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G +D + G N++ +GND DG +G D + + Y R +
Sbjct: 1927 ENADILTGYESDDTITGLDGNDLLKGGAGNDSLDGGTGNDYLSGGSGNDTYLFGRGSGSD 1986
Query: 326 IVYDANEHKQ 335
++ +
Sbjct: 1987 VIEEVANPAT 1996
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+GG + +D T S + + + + + + + + G+ +++G
Sbjct: 1743 DTGGLTATASSFGTNRSEALDGRTMSQTYLSSGDGDDVLYAGSADTKMFSNGGDSLLVGG 1802
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVE 342
+ N+ G+DV +G +G D A + Y R V D QD + +
Sbjct: 1803 TGNDYLVGGEGSDVLEGGNGYDILTGGAGNDTYIFRRGTGIDSVSDYGISASQDVIYVGD 1862
Query: 343 RLR 345
+
Sbjct: 1863 FIT 1865
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 74/233 (31%), Gaps = 28/233 (12%)
Query: 191 VQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTL----IGGVKNYI 243
+ IYG GN+I +Y GG+D + I G ++
Sbjct: 896 IDNIYG----GSGNDIIYAGGGNDSVDGGIGNDNLYGEGGNDSITGGGGDDFIQGDADWQ 951
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L+T I G N IA + V G GNDV+ GN ++ +G+D+ G++G
Sbjct: 952 ALDTHGNDYIDGGAGNDRIAGLGGNDEVFGGDGNDVLQGNDGDDYLDGEAGDDLLVGNNG 1011
Query: 304 LDTFFYY------APSYLYKIYR--------FENAIIVYDANEHKQDFL---SDVERLRF 346
D A + + + D+L D + L
Sbjct: 1012 NDQLMGGDGLDEMAGNEGDDYLDGEAGDDKMYGDDGKDELFGGDGNDWLEGNKDGDYLDG 1071
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
D + ++ L + L +G D + EG D F
Sbjct: 1072 EDGDDVLLGGEENDRLFGGEGNDRLQGDMGDDYLDGEAGNDNLMGLEGNDRLF 1124
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 62/215 (28%), Gaps = 35/215 (16%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A SLGN IY +YDS G+DL+ GG + I+ + I G
Sbjct: 729 AKTDSLGNIIYDATAPSPTRR--DYLYDSAGNDLIK---AGGGSDIINATRGGDNIIEGG 783
Query: 257 EKNMTIA-QHTVI----------------------------ESVVGSSGNDVVIGNSANN 287
+ +A + V SGND + G+ N+
Sbjct: 784 SGSDIVADYGNGNNVLFGEFQGDMADLVSAGETAEGINEKGDLVSSGSGNDQLYGSIRND 843
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
F GND+ G G DT A N + + + ++ +
Sbjct: 844 ALFGGGGNDLLVGGGGNDTILADAAISSASREWNVNNA-DFTGLSFDEALVGGIDNIYGG 902
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ ++L G D
Sbjct: 903 SGNDIIYAGGGNDSVDGGIGNDNLYGEGGNDSITG 937
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
G+D L + L GG N + G + + + G SGND +
Sbjct: 1110 GNDNLMGLEGNDRLFGGDGNDLLQGGAGDDYFDGGNGDDELTGEAGDNRIFGGSGNDRLQ 1169
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G N+ G+D G G + + + Y I +YD
Sbjct: 1170 GGVGNDYLNGGEGDDNLYGGDGTNVLVGGSGNDTYYIDPTREITEIYDNFNG 1221
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ G+DLL G +Y D + G + I + + + G GND +
Sbjct: 1123 LFGGDGNDLL---QGGAGDDYFDGGNGDD-ELTGEAGDNRIFGGSGNDRLQGGVGNDYLN 1178
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G ++ + G +V G SG DT++ + +IY N L +V
Sbjct: 1179 GGEGDDNLYGGDGTNVLVGGSGNDTYYIDPTREITEIYDNFNGDEQNTIKVLGDINLDNV 1238
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 13/173 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + + G G+D + N+ +G+D +G +G D + +
Sbjct: 2823 LQGDTTNDAIRGTNLSDRLYGYEGSDWLDAGEGNDTLTSGTGDDELEGGTGNDAYVFNLG 2882
Query: 313 SYLYKIYRF----ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I E II + A D + ++ + + + +Y+
Sbjct: 2883 DGVDTISDSATLEEGNIIHFGAGITAADLRTRIDGNTLVIEYGNGGDAIILDNYDYSGLN 2942
Query: 369 EDLIQ---VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + + G +EG D+ F + DD+ N G D
Sbjct: 2943 GSHVVEHIEFADGSIIRLASLVDPG-TEGNDLIFGTPF-----DDVINAKGGD 2989
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 36/112 (32%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + + + G GND + G+ ++ +GND G G D F
Sbjct: 1069 LDGEDGDDVLLGGEENDRLFGGEGNDRLQGDMGDDYLDGEAGNDNLMGLEGNDRLFGGDG 1128
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ L + ++ + ++ D + V +
Sbjct: 1129 NDLLQGGAGDDYFDGGNGDDELTGEAGDNRIFGGSGNDRLQGGVGNDYLNGG 1180
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 17/147 (11%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGSSG 303
+ G + + + + G GND + GN ++V ND G G
Sbjct: 1033 LDGEAGDDKMYGDDGKDELFGGDGNDWLEGNKDGDYLDGEDGDDVLLGGEENDRLFGGEG 1092
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDV---ERLRFADQCIDSVN 355
D + ++ + N+ D L + + +
Sbjct: 1093 NDRLQGDMGDDYLDGEAGNDNLMGLEGNDRLFGGDGNDLLQGGAGDDYFDGGNGDDELTG 1152
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + + L +G D
Sbjct: 1153 EAGDNRIFGGSGNDRLQGGVGNDYLNG 1179
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +++ G D G N+ + GND +G G DT + + + +Y
Sbjct: 545 VIFGKEGADTITGGEYADRFYGAGGNDAMYGYGGNDYLEGGKGDDTLYGGKGNDI--LYG 602
Query: 321 FENAIIVYDANEHKQDFLSDVERL 344
+ D + D + L
Sbjct: 603 GQGYDTYIYNIGDGTDTIVDQDNL 626
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ GS GND + G + ++ G+D G SG DT+ YY I
Sbjct: 2551 LYGSWGNDTITGRAGDDTLEGGYGDDRLAGGSGDDTYAYYQWDGNDTIDDVST 2603
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 2/112 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G GND++IG S ++ GND DG +G D + + E+ + V
Sbjct: 2091 DSIYGFGGNDILIGGSEDDYIVGGQGNDTLDGGAGYDDLYDNDGTNRLSGGADEDYLEVA 2150
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L A ++ ++ +Y +Y +G V
Sbjct: 2151 GGVNELDGGADSDRLLTTAGSN--TIFFRRGDGFDYVETYLTSAYTVGDAVI 2200
Score = 44.0 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 22/201 (10%)
Query: 212 QQKDSPFIQTIYDSGGD----DLLDLTLIGGVK--NYIDLNTESWSSIG-----GYEKNM 260
+ D + Y +GGD D D + + G +I+ S + G E N
Sbjct: 2913 TRIDGNTLVIEYGNGGDAIILDNYDYSGLNGSHVVEHIEFADGSIIRLASLVDPGTEGND 2972
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---------SGLDTFFYYA 311
I + + G+D V G + N+ +G+D DG G DT
Sbjct: 2973 LIFGTPFDDVINAKGGDDEVYGLAGNDHLSGGTGSDRLDGGDDEDIIDGGGGNDTLTGGK 3032
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + + ++ DA + ++ + ++ Y S D
Sbjct: 3033 DFDTYLFNIGDGSDVIVDAADKGIGNIAAFGT-GITRNDVSLTVDGNDLLITYGGS-GDQ 3090
Query: 372 IQVIGQDVFESMKHFYEFGLS 392
I+VI + L
Sbjct: 3091 IRVINYNPTGRRSDLPVSALQ 3111
Score = 41.6 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ D + GN N+ G+D+ G +G D + Y + +I
Sbjct: 2693 GTATTDRISGNEGNDFIAAGRGDDILAGGNGDDFYHYNPGDGIDRINDLSLPGEENTLAF 2752
Query: 333 HKQDFLSDV-ERLRFADQCIDSVNVKQRSILE 363
+ L D+ +RL + D + +
Sbjct: 2753 GEGIALPDITQRLTYRDNTLIIRVGDGGDEIH 2784
>gi|83765319|dbj|BAE55462.1| unnamed protein product [Aspergillus oryzae]
Length = 256
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 16/139 (11%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFM---EINFDKADVWRYGIGKGTILSH 122
+ +TFE + D F+ S+ G T S YF ++NF + + L
Sbjct: 118 IGVTFEFVPLAKDANFVLSHGGNKGT-VLASAYFPNNKDLNFVYVYSFAFQPDWKPFLWR 176
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH +GL H + N G P + D N+ SVM+Y
Sbjct: 177 VFTHELGHVIGLRHEFAMNPG-PYFEGDAVQINERNPLSVMNYRRE-----------PPE 224
Query: 183 PMVSDIVAVQKIYGAPKGS 201
SD+ A +K Y P G+
Sbjct: 225 IQQSDVEATKKFYSFPAGT 243
>gi|85703095|ref|ZP_01034199.1| hypothetical protein ROS217_20177 [Roseovarius sp. 217]
gi|85672023|gb|EAQ26880.1| hypothetical protein ROS217_20177 [Roseovarius sp. 217]
Length = 970
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G G+D ++G + +++ +G+DV G G D + + + + ++
Sbjct: 580 LNGGQGDDTLLGGAGDDLLDGGAGDDVIRGDLGDDAAVFDTITRASAAFSLTSEG-LWVV 638
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNV 356
+ D L VE + F+DQ + +V
Sbjct: 639 SALGTDELIGVEWIEFSDQRLRVADV 664
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 65/188 (34%), Gaps = 9/188 (4%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ +I S GDDL+D G +++I + +I G E + I +S +G
Sbjct: 713 EGGGGNDSISASDGDDLVD---AGPGRDFIGGGPGND-TIDGGEGDDVIGAGFGDDSALG 768
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GNDVV G + N++ +GND GS G D + I A
Sbjct: 769 GNGNDVVAGGAGNDMLAGGAGNDSISGSFGND-LIFGNGDDDDIGGGAGRDTINAGAGHD 827
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF---ESMKHFYEFG 390
+ + D + +++ + + G D+ F
Sbjct: 828 NVGGGEGDDDILGGDGNDFLAGGGRDDLIDGGTGDDTINGGAGNDLMMGGAGADQFVFSA 887
Query: 391 LSEG-RDI 397
G RD+
Sbjct: 888 FFNGERDV 895
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N +I+ + V G D + G N+ G+DV G D+
Sbjct: 712 LEGGGGNDSISASDGDDLVDAGPGRDFIGGGPGNDTIDGGEGDDVIGAGFGDDSALGGNG 771
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ A A D +S
Sbjct: 772 ND----VVAGGAGNDMLAGGAGNDSISG 795
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 49/160 (30%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D +D G + I S++GG N +A + + G +GND + G+ N
Sbjct: 744 GNDTIDG---GEGDDVIGAGFGDDSALGG-NGNDVVAGGAGNDMLAGGAGNDSISGSFGN 799
Query: 287 NVFF---------------------------------------------ESSGNDVFDGS 301
++ F +D+ DG
Sbjct: 800 DLIFGNGDDDDIGGGAGRDTINAGAGHDNVGGGEGDDDILGGDGNDFLAGGGRDDLIDGG 859
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+G DT A + L + + ++D + D
Sbjct: 860 TGDDTINGGAGNDLMMGGAGADQFVFSAFFNGERDVIPDF 899
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 10/115 (8%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D+ + V+ I + T+ ++ G ++ + + G GND + + +++
Sbjct: 670 DDPDVFAVALVQGSILIGTDHNDTLLGQAGADMLSGGLGHDHLEGGGGNDSISASDGDDL 729
Query: 289 FF---------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND DG G D + N ++ A
Sbjct: 730 VDAGPGRDFIGGGPGNDTIDGGEGDDVI-GAGFGDDSALGGNGNDVVAGGAGNDM 783
>gi|291566531|dbj|BAI88803.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 335
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 10/152 (6%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDL 245
+IYG + IY E + I+ GDD++ D T+ GG N I
Sbjct: 87 RIYGGKGN---DTIYAGEGNNTLFGNEGEDLIFGGKGDDIIHGGQGDDTIYGGEGNNILS 143
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ I G N TI +V G GN+++ G ++V G++ G G D
Sbjct: 144 GDKGDDLIYGGIGNDTIYGVEGNNTVFGGPGNNLIFGGKGDDVIHSGRGDNTVYGGQGND 203
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + L + + + + K+ F
Sbjct: 204 RIFAEKGNDLLTGGKGSDTFSLVSGDPDKESF 235
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 10/145 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ IY G+D L D + GG N E +++ G E + +
Sbjct: 20 NLNDAIAGGKGNDIIYGGKGEDCLFGGLGDDLIYGGKGNDTIFGEEGNNTLFGDEGDDLV 79
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G GND + NN F + G D+ G G D
Sbjct: 80 YGGSGDDRIYGGKGNDTIYAGEGNNTLFGNEGEDLIFGGKGDDIIHGGQGDDTIYGGEGN 139
Query: 323 NAIIVYDANEH-----KQDFLSDVE 342
N + ++ D + VE
Sbjct: 140 NILSGDKGDDLIYGGIGNDTIYGVE 164
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 16/127 (12%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY----- 309
G E + I + +++ G GND++ G + F G+D+ G G DT F
Sbjct: 9 GTEGSDLIIGGNLNDAIAGGKGNDIIYGGKGEDCLFGGLGDDLIYGGKGNDTIFGEEGNN 68
Query: 310 -----------YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
Y S +IY + +Y + F ++ E L F + D ++ Q
Sbjct: 69 TLFGDEGDDLVYGGSGDDRIYGGKGNDTIYAGEGNNTLFGNEGEDLIFGGKGDDIIHGGQ 128
Query: 359 RSILEYT 365
Y
Sbjct: 129 GDDTIYG 135
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG+ G+D++IG + N+ GND+ G G D F L IY + ++
Sbjct: 8 VGTEGSDLIIGGNLNDAIAGGKGNDIIYGGKGEDCLFGGLGDDL--IYGGKGNDTIFGEE 65
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ F D+ D V Y D I +
Sbjct: 66 GNNT---------LFGDEGDDLVYGGSGDDRIYGGKGNDTIYAGEGNNT 105
>gi|119569615|gb|EAW49230.1| matrix metallopeptidase 21 [Homo sapiens]
Length = 458
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 41/168 (24%)
Query: 45 TELN-PNAQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY- 98
++L+ + + + A WS+V L F E + + DIK ++ PR
Sbjct: 76 SQLSVADQRRIVALAFRMWSEVTPLDFREDLAAPGAAVDIKLGFGRGRHLGCPRAFDGSG 135
Query: 99 --------FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + + G L A+HEIGH LGL P +Y G
Sbjct: 136 QEFAHAWRLGDIHFDDDEHFTPPTSDTGISLLKVAVHEIGHVLGL--PHTYRTG------ 187
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + +F SD A+QK+YG+
Sbjct: 188 -----------SIM---QPNYIPQEPAFE----LDWSDRKAIQKLYGS 217
>gi|85705223|ref|ZP_01036322.1| hypothetical protein ROS217_17182 [Roseovarius sp. 217]
gi|85670096|gb|EAQ24958.1| hypothetical protein ROS217_17182 [Roseovarius sp. 217]
Length = 270
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 15/174 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYID------LNTESWSSI-GG 255
D +++ G+D + LT G ++ + S + G
Sbjct: 80 NDSLSDESGDDSLFGGDGNDTVGAGEGNDLLTGGTGNDQMFGGEGNDTMSGGTGSDVMNG 139
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + + + G G+DV+ G + GND+ DG G D +
Sbjct: 140 GSGNDVMNAGVGADLLSGGEGDDVMRGGGGRDTLSGGEGNDLIDGGHGNDVMTGGVGADT 199
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + I ++ + + D L+ + + D + + V +I+ +YE
Sbjct: 200 FVFKFGRDVITDFEPGDDQID-LTGINGVNDFDDVLSAARVSGTNIVLDFGAYE 252
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 18/162 (11%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ + G + L +++ I G + N TI +G SGND + GN +
Sbjct: 5 TTTMAQLTGTDSADRLIGSAFADQIVGLDGNDTI---------LGGSGNDAINGNDDGDQ 55
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQDFLSDV-- 341
+GND +G G D + + ++++ D N+ D L+
Sbjct: 56 LRGGAGNDTIEGGKGEDALYGGLGNDSLSDESGDDSLFGGDGNDTVGAGEGNDLLTGGTG 115
Query: 342 -ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+++ + ++ + + + +G D+
Sbjct: 116 NDQMFGGEGNDTMSGGTGSDVMNGGSGNDVMNAGVGADLLSG 157
>gi|67920770|ref|ZP_00514289.1| VCBS [Crocosphaera watsonii WH 8501]
gi|67856887|gb|EAM52127.1| VCBS [Crocosphaera watsonii WH 8501]
Length = 1220
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 12/171 (7%)
Query: 222 IYDSGGDDLLDLTLIGG--VKNYID--LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSG 276
I G+D + G D +N+ + I G E N I + + G
Sbjct: 1055 IDAGAGNDTVSGGQKGELIRSGEGDDWVNSGRGNDRIYGDEGNDHILGGIGRDYLRGGDD 1114
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + GN N+ S +D DG G D + + + + + ++ D N +
Sbjct: 1115 NDSLFGNEGNDYLIGDSSDDYLDGGEGSDRLRGGTGNDTFVLSKAQGTDLILDFNPEE-- 1172
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++ D + ++ + +I + E ++ ++
Sbjct: 1173 -----DQFELQDLQVSDLSFDTDRMFGLIKVDNKIIAKVRNISGEQLRLYF 1218
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 28/95 (29%), Gaps = 5/95 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N+ I ++V G +++ ++ GND G G D
Sbjct: 1046 INNLGGNIKIDAGAGNDTVSGGQKGELIRSGEGDDWVNSGRGNDRIYGDEGNDHILGGIG 1105
Query: 313 SYLYKIYR-----FENAIIVYDANEHKQDFLSDVE 342
+ F N Y + D+L E
Sbjct: 1106 RDYLRGGDDNDSLFGNEGNDYLIGDSSDDYLDGGE 1140
>gi|329766759|ref|ZP_08258302.1| RTX toxins and related Ca2+-binding protein [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137014|gb|EGG41307.1| RTX toxins and related Ca2+-binding protein [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 188
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N I + + G +GND + GN N+ ++G+D G G D
Sbjct: 40 IEGKNGNDCIIGGPGDDHINGGNGNDTIEGNEGNDTIEGNNGDDTISGGDGNDKIQGNND 99
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + + DF+ +
Sbjct: 100 DD----FIYGGSGNDKIRGNNGDDFIDGGDN 126
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 199 KGSLGNN-IYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
KG+ GN+ IY + K I GDD ++ GG N +I G
Sbjct: 23 KGTNGNDLIYGLAGDDKIEGKNGNDCIIGGPGDDHIN----GGNGND---------TIEG 69
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N TI + +++ G GND + GN+ ++ + SGND G++G D +
Sbjct: 70 NEGNDTIEGNNGDDTISGGDGNDKIQGNNDDDFIYGGSGNDKIRGNNGDDFIDGGDNTDE 129
Query: 316 YKIYRFENAIIVYDANEHKQD 336
K N +I + + K D
Sbjct: 130 CKGGNGSNTVINCEEEDKKHD 150
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 2/118 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + + G +G+D + G + N+ G+D +G +G DT
Sbjct: 13 ILGTLGDDKLKGTNGNDLIYGLAGDDKIEGKNGNDCIIGGPGDDHINGGNGNDTIEGNEG 72
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + ++ I D N+ Q ++ + + D + D
Sbjct: 73 NDTIEGNNGDDTISGGDGNDKIQG--NNDDDFIYGGSGNDKIRGNNGDDFIDGGDNTD 128
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 40/112 (35%), Gaps = 1/112 (0%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ G+D + G + N++ + +G+D +G +G D P + N I +
Sbjct: 13 ILGTLGDDKLKGTNGNDLIYGLAGDDKIEGKNGNDCIIGG-PGDDHINGGNGNDTIEGNE 71
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + + D + + + + G D +
Sbjct: 72 GNDTIEGNNGDDTISGGDGNDKIQGNNDDDFIYGGSGNDKIRGNNGDDFIDG 123
>gi|15485202|emb|CAC67452.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 26/207 (12%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNT 247
++YG G++ Q + + G+D +D + G G K
Sbjct: 598 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLG 649
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++S+ + + +H IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 650 KGFASLMDEPETSNVLRH--IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDDVL 707
Query: 308 FYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S ++ + + D + + +N
Sbjct: 708 LGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAGADQ 763
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 764 LWFARQGNDLEIRILGTDDALTVHDWY 790
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 154 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 213
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 214 DLGVWSNQLDGGAGVDTVKY 233
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S G D D V++ ++ S IG + N + Q
Sbjct: 371 YGFGIEADLSEGWVRKAARRGMDYYD-----SVRSVENVIGTSMKDVLIGDAQANTLMGQ 425
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 426 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWF 476
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 26/76 (34%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGDDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIV 327
+ I V
Sbjct: 339 ETVSDDIDGGAGQDTV 354
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 14/144 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 207 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 266
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 267 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLG--LD 323
Query: 317 KIYRFENAIIVYDANEHKQDFLSD 340
+Y + I +E D +
Sbjct: 324 TLYGDDGNDIFLQDDETVSDDIDG 347
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 448 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 501
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 502 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 559
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 560 ANVLRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 618
Query: 328 YDANEHKQDF 337
D +
Sbjct: 619 LDGGDGNDTV 628
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 165 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 224
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 225 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 284
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 285 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 316
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 159 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 218
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 219 SNQLDGGAGVDTV 231
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 58/207 (28%), Gaps = 33/207 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D T + + DL+
Sbjct: 323 DTLYGDDGNDIFLQDDETVSDDIDGGAGQDTVDYTALIHAGEIVAPHEYGFGIEADLSEG 382
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D T
Sbjct: 383 -WVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVR 432
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
L F + D L D ++ +
Sbjct: 433 GGDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREH 484
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ L G D + + G++ GR
Sbjct: 485 DVLRGGAGVDTVDYSQAGAHAGVATGR 511
>gi|15485200|emb|CAC67451.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 26/207 (12%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNT 247
++YG G++ Q + + G+D +D + G G K
Sbjct: 598 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLG 649
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++S+ + + +H IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 650 KGFASLMDEPETSNVLRH--IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDDVL 707
Query: 308 FYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S ++ + + D + + +N
Sbjct: 708 LGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAGADQ 763
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 764 LWFARQGNDLEIRILGTDDALTVHDWY 790
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 154 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 213
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 214 DLGVWSNQLDGGAGVDTVKY 233
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S G D D V++ ++ S IG + N + Q
Sbjct: 371 YGFGIEADLSEGWVRKAARRGMDYYD-----SVRSVENVIGTSMKDVLIGDAQANTLMGQ 425
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 426 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWF 476
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD V R ++Y S
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 398
Query: 369 EDLIQVIGQDVFESM 383
+ VIG + + +
Sbjct: 399 RSVENVIGTSMKDVL 413
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 15/194 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 207 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 266
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 267 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLG--LD 323
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D K + EY E DL +
Sbjct: 324 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGW 383
Query: 376 GQDVFESMKHFYEF 389
+ +Y+
Sbjct: 384 VRKAARRGMDYYDS 397
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 448 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 501
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 502 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 559
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 560 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 618
Query: 328 YDANEHKQDF 337
D +
Sbjct: 619 LDGGDGNDTV 628
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 165 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 224
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 225 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 284
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 285 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 316
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 159 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 218
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 219 SNQLDGGAGVDTV 231
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 58/207 (28%), Gaps = 33/207 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D + + + DL+
Sbjct: 323 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEG 382
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D T
Sbjct: 383 -WVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVR 432
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
L F + D L D ++ +
Sbjct: 433 GGDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREH 484
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ L G D + + G++ GR
Sbjct: 485 DVLRGGAGVDTVDYSQAGAHAGVATGR 511
>gi|115525512|ref|YP_782423.1| hemolysin-type calcium-binding region [Rhodopseudomonas palustris
BisA53]
gi|115519459|gb|ABJ07443.1| Hemolysin-type calcium-binding region [Rhodopseudomonas palustris
BisA53]
Length = 484
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+E+ I G + + E + G GNDV+ G N+V +G+DV +G +G D
Sbjct: 340 SETGPDINGNNSGNALTGTSNGEKINGQGGNDVLSGLGGNDVLRGGNGHDVLNGGAGSDQ 399
Query: 307 FFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
F A S + V D A DF+ +++ FA+ + Q +
Sbjct: 400 LFGGASSDTFVFKAGNGLDTVEDFAARGRSHDFVQ-IDKSMFANFNAVIASAHQVGDDVW 458
Query: 365 TASYED 370
D
Sbjct: 459 IDHGTD 464
>gi|163734734|ref|ZP_02142173.1| type I secretion target repeat protein [Roseobacter litoralis Och
149]
gi|161392227|gb|EDQ16557.1| type I secretion target repeat protein [Roseobacter litoralis Och
149]
Length = 596
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
GDD + D TL GG N + + + G N T+ + + G +GND +
Sbjct: 400 GDDTMFGGSNDDTLFGGAGNDLINGQQQDDDLFGQSGNDTLFGGDGFDLLDGGTGNDTLF 459
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G ++ + +G DV DG +G D F + A S
Sbjct: 460 GGNSGDTLIGGAGIDVMDGGTGFDVFEFNAISES 493
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 45/144 (31%), Gaps = 8/144 (5%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L E+ + EK+ + + + G GND + G+ N+ G D G G
Sbjct: 216 LGDETSEHVNSGEKDSIVYGRAGDDVLRGGIGNDTLYGDEGNDRLNGGEGEDTISGGVGD 275
Query: 305 DTFFYYAPSYLYKI--------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
DT F N I A + + S + L D +
Sbjct: 276 DTVFGRQGDDDIDGGAGNDNLAGETGNDDIDGGAGDDRLRGASGNDELDGGDGNDTAFGG 335
Query: 357 KQRSILEYTASYEDLIQVIGQDVF 380
+ IL A + L+ G D
Sbjct: 336 EGDDILRGGAGDDALMGNGGADQI 359
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 50/182 (27%), Gaps = 47/182 (25%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE------------ 291
L S + + G + N T + + G +G+D ++GN + F
Sbjct: 314 LRGASGNDELDGGDGNDTAFGGEGDDILRGGAGDDALMGNGGADQIFGEDGADTLFGQTG 373
Query: 292 ------------------------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+G+D G S DT F A + L
Sbjct: 374 ADQMLGGDGNDYMGGGGGDDVLDGQAGDDTMFGGSNDDTLFGGAGNDL----INGQQQDD 429
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ D L + D + L S + LI G DV + F
Sbjct: 430 DLFGQSGNDTLFGGDGFDLLDGGTGN------DTLFGGNSGDTLIGGAGIDVMDGGTGFD 483
Query: 388 EF 389
F
Sbjct: 484 VF 485
Score = 40.9 bits (94), Expect = 0.81, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 31/129 (24%), Gaps = 41/129 (31%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV------------------------ 288
+ G N T+ + + G G D + G ++
Sbjct: 242 LRGGIGNDTLYGDEGNDRLNGGEGEDTISGGVGDDTVFGRQGDDDIDGGAGNDNLAGETG 301
Query: 289 ------------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDAN 331
+SGND DG G DT F + + N
Sbjct: 302 NDDIDGGAGDDRLRGASGNDELDGGDGNDTAFGGEGDDILRGGAGDDALMGNGGADQIFG 361
Query: 332 EHKQDFLSD 340
E D L
Sbjct: 362 EDGADTLFG 370
>gi|321465332|gb|EFX76334.1| hypothetical protein DAPPUDRAFT_226103 [Daphnia pulex]
Length = 637
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 64/202 (31%), Gaps = 50/202 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETS 74
+ ++ Q W + + R +++ AL W + LTF E +
Sbjct: 160 YTVQGQRWHYTNLTWSLRKGAKSR------DMDSGQIRYQVHRALNLWQEASRLTFTEVN 213
Query: 75 -IHSDIKF----ISSNNGYVCTPRY---------DSRYFMEINFDKADVWRYGIGKGTI- 119
+DI+ N+GY + + + +FD + W
Sbjct: 214 HEDADIRVSFHSGFHNDGYPFDGKGTLLAHAFFPGTGIGGDAHFDDEEPWVADEATQNSE 273
Query: 120 --LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
A HE GH+LGL H S ++M P +D SF
Sbjct: 274 LSFFAVAAHEFGHSLGLSHS-------------------SVQGAIM---FPYYQSVDGSF 311
Query: 178 GYCATPMVSDIVAVQKIYGAPK 199
+ DI +Q IYG+
Sbjct: 312 ----SLHSDDITGIQAIYGSRN 329
>gi|254417324|ref|ZP_05031067.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196175862|gb|EDX70883.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 288
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 12/156 (7%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLL------DLTLI 236
I + IYG G+ I + I G++L+ D
Sbjct: 28 INRIIAIYGDNLIYGGSAADTITAGDGNDTIYANEGLNVIDAGDGNNLIYGGSAADTIRA 87
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I N + I + N I + +++ +GND + N N+ G++
Sbjct: 88 GNGNDTIYANEG-LNVIDAGDGNNLIYGGSAADTIKAGNGNDTIYANEGVNIIDAGDGDN 146
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ SG DT + N I D N+
Sbjct: 147 LIYSGSGNDTITTGSGDDTIYAGEGVNTISTGDGND 182
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 8/180 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G + + E + I + I + +++ GND + N NV
Sbjct: 10 DDWLEGTSSDDVIFGGEGINRIIAIYGDNLIYGGSAADTITAGDGNDTIYANEGLNVIDA 69
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLY-------KIYRFENAIIVYDANEHKQDFLSDVERL 344
GN++ G S DT + I + ++Y + +
Sbjct: 70 GDGNNLIYGGSAADTIRAGNGNDTIYANEGLNVIDAGDGNNLIYGGSAADTIKAGNGNDT 129
Query: 345 RFADQCIDSVNVKQRSILEY-TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+A++ ++ ++ L Y + + + G D + + +G DI +
Sbjct: 130 IYANEGVNIIDAGDGDNLIYSGSGNDTITTGSGDDTIYAGEGVNTISTGDGNDIIYSGSG 189
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
TI G+D + N ID + I N TI + +++ G +
Sbjct: 118 ADTIKAGNGNDTI---YANEGVNIIDAGDGD-NLIYSGSGNDTITTGSGDDTIYAGEGVN 173
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ N++ + SG+D+ + G + + + + ++ I
Sbjct: 174 TISTGDGNDIIYSGSGDDLINAGRGQNQIWLGGGQDTISLEMWGSSEI 221
>gi|311825|emb|CAA80501.1| leukotoxin A [Mannheimia haemolytica]
Length = 233
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N ++++ G+ GND + G +++ +G+D DG G D
Sbjct: 3 FKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 62
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 63 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 99
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 5/135 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFY 309
+I G + N + + + G +G+D + G N++ G+D+F G D+
Sbjct: 20 TIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSITE 79
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + N H + E++ Q ++I Y A+
Sbjct: 80 SEGNDKLSFSDSNLKDLTFEKVNHHLVITNTKQEKVTI--QNWFREAEFAKTIQNYVATR 137
Query: 369 EDLIQVIGQDVFESM 383
+D I+ I E +
Sbjct: 138 DDKIEEIIGQNGERI 152
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 29/96 (30%), Gaps = 9/96 (9%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+ G+ N+ F G D DG+ G D F I N D D
Sbjct: 1 DIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDD---IIDGGNGDDFIDGG-KGNDL 56
Query: 338 LS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
L D+ R D + L ++ S
Sbjct: 57 LHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 92
>gi|75674731|ref|YP_317152.1| hemolysin-type calcium-binding region [Nitrobacter winogradskyi
Nb-255]
gi|74419601|gb|ABA03800.1| hemolysin-type calcium-binding region [Nitrobacter winogradskyi
Nb-255]
Length = 359
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 252 SIGGYEKNMTIAQH----------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ G + ++ +A + ++V G SGNDV+ + +N+ F +GND G
Sbjct: 94 DVTGGDNDVFVAAGKGHDTINLNDSGNDTVYGGSGNDVIRASEGDNLLFGGAGNDSIYGG 153
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+G DT A + L A + DA D
Sbjct: 154 AGNDTLDGGAGNDLLVSGGARAAGVGGDARIASAD 188
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D G + I+LN ++ G N I + G +GND + G
Sbjct: 94 DVTGGDNDVFVAAGKGHDTINLNDSGNDTVYGGSGNDVIRASEGDNLLFGGAGNDSIYGG 153
Query: 284 SANNVFFESSGNDVF 298
+ N+ +GND+
Sbjct: 154 AGNDTLDGGAGNDLL 168
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 21/107 (19%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGND-------------VFDGSSGLDTFFYYAPSYLY 316
+++G +GND ++G + V +GND G G DTF A S
Sbjct: 237 TLIGGAGNDTLVGMQGD-VLQGGAGNDQFTLLSGDGSANSTLYGGGGDDTFRIEARSGSD 295
Query: 317 KIYRFEN-------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
I+ +D + D + L F+DQ +VN
Sbjct: 296 TIFGGNGNDTAEFVGRSFFDVAKIDVDASTSTYTLHFSDQQTVAVNG 342
>gi|294789785|ref|ZP_06755015.1| rhizobiocin/RTX toxin [Simonsiella muelleri ATCC 29453]
gi|294482291|gb|EFG29988.1| rhizobiocin/RTX toxin [Simonsiella muelleri ATCC 29453]
Length = 603
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 15/116 (12%)
Query: 239 VKNYIDLN--TESWSSIGGYEKNMTIAQHTVI---------ESVVGSSGNDVVIGNSANN 287
+ IDL +W ++ I TV E + G G+DV+ G + N+
Sbjct: 415 ANSKIDLTWAQANWQEWKD-SGSLMIQGTTVADKLQGSGKTEILWGGKGDDVLDGFAGND 473
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+GND G G D A + ++ N+ D + E
Sbjct: 474 TLIGGAGNDWLRGGDGNDILIGGAGNDT---LHSGAGADIFVLNQSGADTIVAFES 526
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 36/167 (21%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + S + ++ GDD+LD G+ N
Sbjct: 443 TVADKLQGSGKTEILWGGKGDDVLD----------------------GFAGN-------- 472
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++++G +GND + G N++ +GND +G D F S I FE+ +
Sbjct: 473 -DTLIGGAGNDWLRGGDGNDILIGGAGNDTLHSGAGADIFVLN-QSGADTIVAFESGVDK 530
Query: 328 YDANEHKQDFLSDVERLR----FADQCIDSVNVKQRSILEYTASYED 370
+ +E + + E F++ + + + T SY+D
Sbjct: 531 LNVSEFRGLLADNGENFAWLNVFSETRVQGKSALIFNTDTNTLSYQD 577
>gi|239787166|emb|CAQ64443.1| adenylate cyclase-hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 26/207 (12%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNT 247
++YG G++ Q + + G+D +D + G G K
Sbjct: 598 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLG 649
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++S+ + + +H IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 650 KGFASLMDEPETSNVLRH--IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDDVL 707
Query: 308 FYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S ++ + + D + + +N
Sbjct: 708 LGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAGADQ 763
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 764 LWFARQGNDLEIRILGTDDALTVHDWY 790
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 154 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 213
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 214 DLGVWSNQLDGGAGVDTVKY 233
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S G D D V++ ++ S IG + N + Q
Sbjct: 371 YGFGIEADLSEGWVRKAARRGMDYYD-----SVRSVENVIGTSMKDVLIGDAQANTLMGQ 425
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 426 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWF 476
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD V R ++Y S
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 398
Query: 369 EDLIQVIGQDVFESM 383
+ VIG + + +
Sbjct: 399 RSVENVIGTSMKDVL 413
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 61/194 (31%), Gaps = 15/194 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 207 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPAL 266
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 267 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLG--LD 323
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D K + EY E DL +
Sbjct: 324 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGW 383
Query: 376 GQDVFESMKHFYEF 389
+ +Y+
Sbjct: 384 VRKAARRGMDYYDS 397
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 448 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 501
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 502 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 559
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 560 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 618
Query: 328 YDANEHKQDF 337
D +
Sbjct: 619 LDGGDGNDTV 628
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 165 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 224
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D + D + ++E L +
Sbjct: 225 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 284
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 285 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 316
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 159 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 218
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 219 SNQLDGGAGVDTV 231
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 58/207 (28%), Gaps = 33/207 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----------DLNTE 248
+ +Y + Q D I G D +D + + + DL+
Sbjct: 323 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEG 382
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W +E+V+G+S DV+IG++ N G+D T
Sbjct: 383 -WVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVR 432
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
L F + D L D ++ +
Sbjct: 433 GGDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREH 484
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ L G D + + G++ GR
Sbjct: 485 DVLRGGAGVDTVDYSQAGAHAGVATGR 511
>gi|170724217|ref|YP_001751905.1| Na-Ca exchanger/integrin-beta4 [Pseudomonas putida W619]
gi|169762220|gb|ACA75536.1| Na-Ca exchanger/integrin-beta4 [Pseudomonas putida W619]
Length = 5962
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
YI+ + + G + T+ + + G GND + G N++ +GND G
Sbjct: 5787 YINEHYTEFDVAGSNDGADTLMGGAGNDILFGQGGNDTLDGGKGNDMLLGGTGNDTLIGG 5846
Query: 302 SGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
G D + + + + + ++ D + D L
Sbjct: 5847 QGNDMLIGGSGADTFVWKSGDIGSDVIKDFKVSEGDRL 5884
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ A+Q Y A K + K T +D G + TL+GG N I
Sbjct: 5761 VEAIQG-YVANKLGVDAGDVDARAMHKYINEHYTEFDVAGSNDGADTLMGGAGNDILFGQ 5819
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF---FESSGNDVF 298
++ G + N + T ++++G GND++IG S + F G+DV
Sbjct: 5820 GGNDTLDGGKGNDMLLGGTGNDTLIGGQGNDMLIGGSGADTFVWKSGDIGSDVI 5873
>gi|58176632|pdb|1RMZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor Nngh At 1.3 A Resolution
gi|122920455|pdb|2HU6|A Chain A, Crystal Structure Of Human Mmp-12 In Complex With
Acetohydroxamic Acid And A Bicyclic Inhibitor
gi|134105464|pdb|2OXU|A Chain A, Uninhibited Form Of Human Mmp-12
gi|134105465|pdb|2OXW|A Chain A, Human Mmp-12 Complexed With The Peptide Iag
gi|134105467|pdb|2OXZ|A Chain A, Human Mmp-12 In Complex With Two Peptides Pqg And Iag
gi|159163643|pdb|1YCM|A Chain A, Solution Structure Of Matrix Metalloproteinase 12 (Mmp12)
In The Presence Of N-Isobutyl-N-[4-
Methoxyphenylsulfonyl]glycyl Hydroxamic Acid (Nngh)
gi|159163662|pdb|1Z3J|A Chain A, Solution Structure Of Mmp12 In The Presence Of
N-Isobutyl-N- 4-Methoxyphenylsulfonyl]glycyl Hydroxamic
Acid (Nngh)
gi|291191398|pdb|1Y93|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With Acetohydroxamic Acid At Atomic Resolution
gi|305677774|pdb|3LIK|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
gi|305677775|pdb|3LIL|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
gi|305677776|pdb|3LIR|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
gi|305677777|pdb|3LJG|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
Length = 159
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 58/189 (30%), Gaps = 49/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 5 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 57
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 58 VFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 116
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 117 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 150
Query: 188 IVAVQKIYG 196
I +Q +YG
Sbjct: 151 IRGIQSLYG 159
>gi|15485198|emb|CAC67450.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 26/207 (12%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNT 247
++YG G++ Q + + G+D +D + G G K
Sbjct: 598 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLG 649
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++S+ + + +H IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 650 KGFASLMDEPETSNVLRH--IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDDVL 707
Query: 308 FYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S ++ + + D + + +N
Sbjct: 708 LGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAGADQ 763
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 764 LWFARQGNDLEIRILGTDDALTVHDWY 790
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIY 319
++ ++G +GND + GN+ +N +G+D DG +G DT +
Sbjct: 154 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLAGGEGHNTVIGGAGDDVFLQ 213
Query: 320 RFENAIIVYDANEHKQDFLSDVER 343
D +V +
Sbjct: 214 DLGVWSNQLDGGAGVDTVKYNVHQ 237
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S + G D D V+N ++ S IG + N + Q
Sbjct: 371 YGFGIEADLSREWVRKASALGVDYYD-----SVRNVENVIGTSMKDVLIGDAQANTLMGQ 425
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 426 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWF 476
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 15/194 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 207 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQNGTVEKWPAL 266
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+++ IE++ GSS ND + G+ +N + GND G G D L
Sbjct: 267 -NLLSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIRGRGGDDILRGGLG--LD 323
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D K + EY E DL +
Sbjct: 324 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREW 383
Query: 376 GQDVFESMKHFYEF 389
+ +Y+
Sbjct: 384 VRKASALGVDYYDS 397
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD + V ++Y S
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSV 398
Query: 369 EDLIQVIGQDVFESM 383
++ VIG + + +
Sbjct: 399 RNVENVIGTSMKDVL 413
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 448 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 501
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 502 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 559
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 560 ANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 618
Query: 328 YDANEHKQDF 337
D +
Sbjct: 619 LDGGDGNDTV 628
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND + G +N +G+DV DG
Sbjct: 165 SITGNAHDNFLAGGAGDDRLDGGAGNDTLAGGEGHNTVIGGAGDDVFLQDLGVWSNQLDG 224
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R + I D D + ++E L +
Sbjct: 225 GAGVDTVKYNVHQPSEERLERMGDTGIHADLQNGTVEKWPALNLLSVDHVKNIENLHGSS 284
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 285 LNDSIAGDDRDNELWGDDGNDTIRGRGGDDIL 316
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 159 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLAGGEGHNTVIGGAGDDVFLQDLGVW 218
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 219 SNQLDGGAGVDTV 231
Score = 37.8 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 59/206 (28%), Gaps = 31/206 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------- 252
+ +Y + Q D I G D +D + + + + +
Sbjct: 323 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSRE 382
Query: 253 -IGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ +V +E+V+G+S DV+IG++ N G+D T
Sbjct: 383 WVRKASALGVDYYDSVRNVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVRG 433
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
L F + D L D ++ ++
Sbjct: 434 GDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREHD 485
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGR 395
L G D + + G++ GR
Sbjct: 486 VLRGGAGVDTVDYSQAGAHAGVATGR 511
>gi|190402260|gb|ACE77670.1| matrix metalloproteinase-24 precursor (predicted) [Sorex araneus]
Length = 496
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 45/132 (34%), Gaps = 28/132 (21%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGK--GTILSHNALH 126
F + H D G++ + + +FD + W G G L A+H
Sbjct: 74 FFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVH 133
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GHALGL H + +M+ F + P
Sbjct: 134 ELGHALGLEHSNDPSA-------------------IMAPFYQYMETHNFKL-----PQ-D 168
Query: 187 DIVAVQKIYGAP 198
D+ +QKIYG P
Sbjct: 169 DLQGIQKIYGPP 180
>gi|324512603|gb|ADY45217.1| Macrophage metalloelastase [Ascaris suum]
Length = 486
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 31/117 (26%)
Query: 52 QEVARWALGEWSKVV--------DLTFEETSIHSDIKFI----SSNNGYVC--------- 90
+ + R + WS +L FEE +D ++G
Sbjct: 156 RSIVRKSFALWSTQTMIQSMPSVNLQFEEAEREADADITILWAEGDHGDAYKFDGTGDHT 215
Query: 91 -------TPRYDSRYF--MEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHP 137
P Y +I+ D ++ W G G+GT S+ +HEIGHALGL H
Sbjct: 216 NILAHTFYPTYQETGTLNGDIHLDDSEKWTSDGNGEGTAFSNVFVHEIGHALGLGHS 272
>gi|311258321|ref|XP_003127551.1| PREDICTED: matrix metalloproteinase-23-like [Sus scrofa]
Length = 393
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 32/142 (22%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDI 79
W ++ + Y+ + LS + + +A A WS V +F E + SD+
Sbjct: 90 RWDHFNLTYRILSFPRNLLSP-----SETRRGLA-AAFRMWSDVSPFSFREVAPEQPSDL 143
Query: 80 KFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG------ 117
+ + T +F I+FD ++ W G +
Sbjct: 144 RIGFYPVNHTDCLVSPLHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGV 203
Query: 118 --TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 204 WLTDLVHVAAHEIGHALGLMHS 225
>gi|291300354|ref|YP_003511632.1| RTX toxins and related Ca2+-binding protein-like protein
[Stackebrandtia nassauensis DSM 44728]
gi|290569574|gb|ADD42539.1| RTX toxins and related Ca2+-binding protein- like protein
[Stackebrandtia nassauensis DSM 44728]
Length = 728
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + T+A + + G +GND V G N+V G+D DG G D +
Sbjct: 439 TMYGGDGDDTLAGGDANDYLDGGTGNDKVTGGGGNDVVSGGKGDDTLDGGEGKDVMYSGF 498
Query: 312 PSYLYKIYRFENAII 326
+ A +
Sbjct: 499 GKDSVTGDADDTAYV 513
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 61/207 (29%), Gaps = 22/207 (10%)
Query: 203 GNNIYKIEVQQKDSP--FIQTIYDSGGDDLLDL--------TLIGGVKNYIDLNTESWSS 252
GN I + + P T+ GDD + + +L G K+ ID +
Sbjct: 224 GNVIVESNGTKHTYPPGTNITVRGGQGDDTIKVDAKGVQVTSLGGAGKDTIDAGNPLFPF 283
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N TI ++V + G++ V + + GND SG D+
Sbjct: 284 GGDKDGNNTIISGDGDDTVTTAGGDNRVSTGAGKDTVMTGDGNDNISTYSGDDSVLDLGG 343
Query: 313 SYLYKIYRFENAIIVYDANE----HKQDFL--SDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + N D + + + + D V + +
Sbjct: 344 KNDISTGAGADTVSAGGDNHVYSGDGADKINTGGGRDVIASGEGNDRVQAGKGDDRVFAG 403
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSE 393
D + + E G E
Sbjct: 404 EGADYVDGQDGN------DHLEAGAGE 424
Score = 40.1 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 45/173 (26%), Gaps = 14/173 (8%)
Query: 247 TESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGN----------SANNVFFESS 293
+ ++ G + + TI A+ + + +G +G D + NN
Sbjct: 239 PGTNITVRGGQGDDTIKVDAKGVQV-TSLGGAGKDTIDAGNPLFPFGGDKDGNNTIISGD 297
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D + G + A + I Y ++ D + A S
Sbjct: 298 GDDTVTTAGGDNRVSTGAGKDTVMTGDGNDNISTYSGDDSVLDLGGKNDISTGAGADTVS 357
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
A + + G + R + Y+
Sbjct: 358 AGGDNHVYSGDGADKINTGGGRDVIASGEGNDRVQAGKGDDRVFAGEGADYVD 410
>gi|261363640|ref|ZP_05976523.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria mucosa ATCC 25996]
gi|288568173|gb|EFC89733.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria mucosa ATCC 25996]
Length = 656
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 12/157 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D +LIG N ++ G E N + + + G G+D++ G++ N++
Sbjct: 228 DNSLIGNSGNNRLSGGRGSDTLYGMEGNDLLMGGDDRDELYGGQGDDILRGDAGNDLLDG 287
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---------VE 342
GND DG SG DT + +Y + + +I D + VE
Sbjct: 288 GYGNDTLDGGSGADTMAGGLGNDVYHVDNVNDTVIEET--NGGIDTIYSSVTYTAPTHVE 345
Query: 343 RLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
L + +IL + L G D
Sbjct: 346 NLTLTGNDNTFAFGNNADNILTGNSGNNRLSGGRGSD 382
>gi|304320945|ref|YP_003854588.1| iron-regulated protein FrpC [Parvularcula bermudensis HTCC2503]
gi|303299847|gb|ADM09446.1| iron-regulated protein FrpC [Parvularcula bermudensis HTCC2503]
Length = 280
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G D++ GG + + + W I G N T+ + + G +GND +I
Sbjct: 97 IDGGKGADVIS----GGFGDDYLVGDDGWDRISGRAGNDTLIGSDGRDLLEGGAGNDRLI 152
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G + +GNDV DG+SG DT Y + +++
Sbjct: 153 GWDGVDTLVGGAGNDVLDGNSGNDTLIYNMSDNVGSFDKYDGD 195
>gi|217968903|ref|YP_002354137.1| hypothetical protein Tmz1t_0463 [Thauera sp. MZ1T]
gi|217506230|gb|ACK53241.1| hypothetical protein Tmz1t_0463 [Thauera sp. MZ1T]
Length = 394
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 34/180 (18%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISS-NNGYVCTPRYDSRYFMEINFDK 106
A + R A WS ++ F + ++++ + G ++
Sbjct: 210 AFAARILRLA-QIWSAYANIFFVASEDKDAEVRVAFDKDGGSWSYEGTNALAVPPSEPTM 268
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN---------------GGYPVYGVDN 151
W + LHE GH LGL H + GG P + N
Sbjct: 269 NLGWLVPALPIDDVESVVLHEFGHVLGLAHEHNNPSGDIPWDRKEVLKLLGGPPNHWDQN 328
Query: 152 D---YENDSFLT------------SVMSYFMPQD-SMMDASFGYCATPMVSDIVAVQKIY 195
Y ++ T S+MSYF P++ + F T D + ++Y
Sbjct: 329 TIDQYLYRTWETDRFPFAKPFDPLSIMSYFFPKEVTGGKQIFSTNTTLSSGDKEFISRLY 388
>gi|254513334|ref|ZP_05125399.1| type I secretion target repeat protein [Rhodobacteraceae bacterium
KLH11]
gi|221532338|gb|EEE35334.1| type I secretion target repeat protein [Rhodobacteraceae bacterium
KLH11]
Length = 873
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 8/173 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D +L GG + + + + G + + + + ++G GND + G S +
Sbjct: 562 DDSLFGGQGDDHLMGSAGHDMLDGGAGDDLLDGGSGFDILIGGQGNDTLRGGSEADTLRG 621
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHKQDFLS---DVER 343
G+DV DG SG D F + DFLS +
Sbjct: 622 EGGHDVMDGGSGNDEIFGGIGDDQIDGGSGADVLNGGDGNDSLSGRSGDDFLSGDDGNDT 681
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L D L + + +I +G D + EG D
Sbjct: 682 LSGGSGNDDLDGGVGDDSLSGGSGSDTVIGGLGSDTLDGGSGNDTLAGGEGSD 734
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 24/198 (12%)
Query: 215 DSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIE 269
+ G+D L + G + ++ S + I G + I + +
Sbjct: 594 GGSGFDILIGGQGNDTLRGGSEADTLRGEGGHDVMDGGSGNDEIFGGIGDDQIDGGSGAD 653
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGS------------------SGLDTFFYYA 311
+ G GND + G S ++ GND G SG DT
Sbjct: 654 VLNGGDGNDSLSGRSGDDFLSGDDGNDTLSGGSGNDDLDGGVGDDSLSGGSGSDTVIGGL 713
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S + + + ++ + D E + A + + +L + + L
Sbjct: 714 GSDTLDGGSGNDTLAGGEGSDTLKGGSDDDELIGGAGNDYLNGSSG-DDVLNGGSGKDRL 772
Query: 372 IQVIGQDVFESMKHFYEF 389
G D F
Sbjct: 773 YLGAGDDHASGGADADRF 790
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 45/125 (36%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + ++ + +++ G G D + G S+ +V GND+ G +G+
Sbjct: 484 GALSYDDDLSGNAGSDALYGGIGTDTLTGGSSGDVLEGDDGNDLLHGGAGVGANSGIVSQ 543
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
Y R++ V ++ + L + +L+ + ++ LI
Sbjct: 544 YDEDGVRYDQFGNVLTEDDDSLFGGQGDDHLMGSAGHDMLDGGAGDDLLDGGSGFDILIG 603
Query: 374 VIGQD 378
G D
Sbjct: 604 GQGND 608
>gi|238482609|ref|XP_002372543.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220700593|gb|EED56931.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 256
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 16/139 (11%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFM---EINFDKADVWRYGIGKGTILSH 122
+ +TFE + D F+ S+ G T S YF ++NF + + L
Sbjct: 118 IGVTFEFVPLAKDANFVLSHGGDKGT-VLASAYFPNNKDLNFVYVYSFAFQPDWKPFLWR 176
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH +GL H + N G P + D N+ SVM+Y
Sbjct: 177 VFTHELGHVIGLRHEFAMNPG-PYFEGDAVQINERNPLSVMNYRRE-----------PPE 224
Query: 183 PMVSDIVAVQKIYGAPKGS 201
SD+ A +K Y P G+
Sbjct: 225 IQQSDVEATKKFYSFPAGT 243
>gi|110677975|ref|YP_680982.1| type I secretion target domain-containing protein [Roseobacter
denitrificans OCh 114]
gi|109454091|gb|ABG30296.1| type I secretion target domain protein, putative [Roseobacter
denitrificans OCh 114]
Length = 1021
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 31/84 (36%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ ++ + + G GNDV+ G + N+ + GNDV G G D + A
Sbjct: 871 TMGGHDSLFGGDGNDLLQGGGGNDVLSGGAGNDTIYGDGGNDVLSGGLGDDVLYGGAGEN 930
Query: 315 LYKIYRFENAIIVYDANEHKQDFL 338
+ + E + V +
Sbjct: 931 TFLVAASEGSDTVVGGASGWTQTI 954
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + N + + + G +GND + G+ N+V G+DV G +G +TF A
Sbjct: 877 SLFGGDGNDLLQGGGGNDVLSGGAGNDTIYGDGGNDVLSGGLGDDVLYGGAGENTFLVAA 936
Query: 312 PSYLYKIYRFENA 324
+ +
Sbjct: 937 SEGSDTVVGGASG 949
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ G +G+D +IG + + + +GND +G +G D F +
Sbjct: 567 ISGGAGDDHLIGGAGDERLYGDAGNDTIEGGAGDDRLFGGDEVGADAVV 615
>gi|45552531|ref|NP_995788.1| matrix metalloproteinase 2 [Drosophila melanogaster]
gi|21665775|emb|CAC81969.1| matrix metalloproteinase 2-MMP [Drosophila melanogaster]
gi|45445620|gb|AAS64885.1| matrix metalloproteinase 2 [Drosophila melanogaster]
Length = 758
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 52 QEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDS-------------R 97
+ + + AL W+ LTF E S +DI+ + + + ++D
Sbjct: 165 ERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAFYPGEG 224
Query: 98 YFMEINFDKADVWRYGIGK----GTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDND 152
+ +FD + W + GT + ALHE+GH+LGL H + +P Y +
Sbjct: 225 RGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGLAHSAIPDAVMFPWYQNNEV 284
Query: 153 YEN 155
N
Sbjct: 285 AGN 287
>gi|325272563|ref|ZP_08138930.1| hypothetical protein G1E_06477 [Pseudomonas sp. TJI-51]
gi|324102296|gb|EGB99775.1| hypothetical protein G1E_06477 [Pseudomonas sp. TJI-51]
Length = 1125
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
V YI + + G + N ++ + + G GND + G N++ +G
Sbjct: 941 TTSNVHQYITEHYNEFDISGAKDGNDILSGGNGNDILFGQGGNDTLDGGKGNDILLGGTG 1000
Query: 295 NDVFDGSSGLDTFFYYAPSYLY--KIYRFENAII 326
ND G G D + + + K F N +I
Sbjct: 1001 NDTLIGGQGDDILIGGSGADTFVWKAGDFGNDVI 1034
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A+Q Y A K + + + +D G + L GG N I
Sbjct: 924 ALQ-TYVAQKSGVDVSSITTSNVHQYITEHYNEFDISGAKDGNDILSGGNGNDILFGQGG 982
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---ESSGNDVF 298
++ G + N + T ++++G G+D++IG S + F GNDV
Sbjct: 983 NDTLDGGKGNDILLGGTGNDTLIGGQGDDILIGGSGADTFVWKAGDFGNDVI 1034
>gi|254411749|ref|ZP_05025525.1| SCP-like extracellular protein, putative [Microcoleus
chthonoplastes PCC 7420]
gi|196181471|gb|EDX76459.1| SCP-like extracellular protein, putative [Microcoleus
chthonoplastes PCC 7420]
Length = 577
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 6/139 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-- 308
SS G + I + + G GND + G ++ + G+D+ G G DT
Sbjct: 424 SSGGMVGGDDIIYGGKGNDRIGGKGGNDFLYGGDDHDRIWGDDGDDLLWGGLGDDTLTGD 483
Query: 309 ---YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
S + + E + D +DFL L F + I + + +
Sbjct: 484 DFSGGQGSDTFVLALGEGTDTIID-FHLGEDFLGLANGLTFEELTITQGSGGNKGHALIS 542
Query: 366 ASYEDLIQVIGQDVFESMK 384
+ E L ++ G D + +
Sbjct: 543 SGDETLARLKGVDANDLIA 561
Score = 40.5 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 2/127 (1%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S+ +D + G++ ++ GND+ G G D I+Y +
Sbjct: 383 SASDDHLQGSADKDIIAGCLGNDIIYGKEGNDILRGDFNHRS-SGGMVGGDDIIYGGKGN 441
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ + D + L + +D + + F L E
Sbjct: 442 DRIGGKGGNDFLYGGDDHDRIWGDDGDDLLWGGLGDDTLTGDDFSGGQGSDTFVL-ALGE 500
Query: 394 GRDITFD 400
G D D
Sbjct: 501 GTDTIID 507
Score = 38.6 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Query: 262 IAQHTVIESVVGSSGNDVVIGN----------SANNVFFESSGNDVFDGSSGLDTFFYYA 311
IA + + G GND++ G+ +++ + GND G G + F Y
Sbjct: 398 IAGCLGNDIIYGKEGNDILRGDFNHRSSGGMVGGDDIIYGGKGNDRI-GGKGGNDFLYG- 455
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+I+ + +++ D + +D + ++ +I+++ + L
Sbjct: 456 GDDHDRIWGDDGDDLLWGGLGDDTLTGDDFSGGQGSDTFVLALGEGTDTIIDFHLGEDFL 515
Query: 372 IQVIG 376
G
Sbjct: 516 GLANG 520
>gi|158341024|ref|YP_001522191.1| hypothetical protein AM1_E0108 [Acaryochloris marina MBIC11017]
gi|158311265|gb|ABW32877.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 1859
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSS 275
TI GGDD + + N D+ + + + G N ++ + + G
Sbjct: 1692 TNATIQGRGGDDNITGS------NRADIIEGNRGNDTLNGGSGNDSLLGGGNDDVLTGGD 1745
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G D ++G S + +GND+ G+ G DTF + + F D +
Sbjct: 1746 GRDTLVGGSGADSLNGGAGNDLLQGNGGDDTFIFAGDFGRDTVVDFNGNADQIDLSSFAI 1805
Query: 336 DFLSDVER 343
+SD++
Sbjct: 1806 G-ISDIDT 1812
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 47/141 (33%), Gaps = 2/141 (1%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L+ +LIGG + +I G + N TI +++ +G+D + N+
Sbjct: 333 LNDSLIGGTNADTLIGGGGDDTIVGSDGNNTIDGGDGNDTIESGAGDDTIDAGDGNDTIE 392
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G+D D G +T I I+ S A +
Sbjct: 393 SGAGDDTIDAGDGNNTI--DGGDGNNNIESGAGDDIISSGAGDDIITSSGGNDTIDAGEG 450
Query: 351 IDSVNVKQRSILEYTASYEDL 371
D+VN S + DL
Sbjct: 451 NDTVNAGLASGIADGGEGTDL 471
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 7/149 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G N ++ T ++++G G+D ++G+ NN GND + +G DT
Sbjct: 327 DITGTNLNDSLIGGTNADTLIGGGGDDTIVGSDGNNTIDGGDGNDTIESGAGDDTIDAGD 386
Query: 312 PSYLYKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + ++ I D N D +++E + D ++ + ++
Sbjct: 387 GNDTIESGAGDDTIDAGDGNNTIDGGDGNNNIE----SGAGDDIISSGAGDDIITSSGGN 442
Query: 370 DLIQVIGQDVFESMKHFYEFG-LSEGRDI 397
D I + + EG D+
Sbjct: 443 DTIDAGEGNDTVNAGLASGIADGGEGTDL 471
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 14/178 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ S TI G+D + D T+ G N + +I + N TI
Sbjct: 350 GGDDTIVGSDGNNTIDGGDGNDTIESGAGDDTIDAGDGNDTIESGAGDDTIDAGDGNNTI 409
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++ +G+D++ + +++ S GND D G DT S +
Sbjct: 410 DGGDGNNNIESGAGDDIISSGAGDDIITSSGGNDTIDAGEGNDTVNAGLASGIADGGEGT 469
Query: 323 NAIIV---------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++V ++ S+ + + D Q + AS + L
Sbjct: 470 DLLVVDFSELNVGITMSSSFITAGSSNFNFVHVNFENFDITGTNQADSINGDASADTL 527
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 3/138 (2%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I + +S++G + D +IG ++ S GN+ DG G DT A
Sbjct: 325 NFDITGTNLNDSLIGGTNADTLIGGGGDDTIVGSDGNNTIDGGDGNDTIESGAGDDTIDA 384
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N I A + D + D + + I+ A + + G D
Sbjct: 385 GD-GNDTIESGAGDDTIDAGDGNNTIDGGDGNNNIESGAGDDIISSGAGDDIITSSGGND 443
Query: 379 VFE--SMKHFYEFGLSEG 394
+ GL+ G
Sbjct: 444 TIDAGEGNDTVNAGLASG 461
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ TI GG+D L IG N I ++ G + + + +S+ G
Sbjct: 1531 GTGLADTINGRGGNDTL----IGRGDNDILNGDGGRDTLEGRNGDDILNGGSGADSLNGG 1586
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+G D + G + + + +D+ DG +G DT+ + A
Sbjct: 1587 NGLDTLNGGNGRDTLDGGNNSDILDGGNGADTYLWDAGDDRDIYQDTGTTGT 1638
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 51/337 (15%), Positives = 93/337 (27%), Gaps = 46/337 (13%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ S+ + +N+G Y + N+ +D + Y I G + A I
Sbjct: 1359 VTTPSNGTLVDNNDGTYT-------YTPDANYTGSDAFTYTISDGNGGTDTATVNI---- 1407
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GS N V D ++ + + D + +
Sbjct: 1408 ---TVGSTNDIATVTDDSGSVTEDDDPNTLTTSGQVIVTDSDPGEAFATA------ETLI 1458
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDS-------------PFIQTIYDSGGDDLLDLTLIG-- 237
YG + + + F T D G + +T+ G
Sbjct: 1459 GTYG-TFTVDADGFWNYTADNTQAAIQELGLGESLTETFSVTSLDGTGAGTVTITINGLN 1517
Query: 238 -----GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ L T +I G N T+ + + G G D + G + +++
Sbjct: 1518 ELLEGTSQADFLLGTGLADTINGRGGNDTLIGRGDNDILNGDGGRDTLEGRNGDDILNGG 1577
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQC 350
SG D +G +GLDT N + D +L D +R + D
Sbjct: 1578 SGADSLNGGNGLDTLNGGNGRDTLD---GGNNSDILDGGNGADTYLWDAGDDRDIYQDTG 1634
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + G +V
Sbjct: 1635 TTGTDRITSLVENFNGLTATFDATSGIEVINREGDLA 1671
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I E + GS+G+D ++G ++ +GND DG +G+D+ + +
Sbjct: 176 IIGGPGDEVLNGSNGDDTILGGGGDDTINGGAGNDSIDGGTGIDSIDGGSGNDTIVGGGS 235
Query: 322 ENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSIL 362
N D ++ E L AD + ++L
Sbjct: 236 GFGFGDSINNPIPTDSVNGDEGTDLLIADYSQGVRAIFLTNLL 278
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + ++++G G+D + G + N+ +G D DG SG DT +
Sbjct: 178 GGPGDEVLNGSNGDDTILGGGGDDTINGGAGNDSIDGGTGIDSIDGGSGNDTIVGGGSGF 237
Query: 315 LYKIYRFENAIIVYDANEHKQDFL 338
+ + D L
Sbjct: 238 GFGDSINNPIPTDSVNGDEGTDLL 261
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 74/259 (28%), Gaps = 40/259 (15%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL G+ +GG + D+ + ++ S F+ + + +F + DI
Sbjct: 641 GLG-SGTADGGEGTDLLIADFSELNVGITMSSSFI---TGGNTTFVHAN-FENFDITGTN 695
Query: 193 KIYGAPKGSLGNNI--YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ + + + + I GDDLL + ++++ S
Sbjct: 696 QADSINGDASADTLNGGDGDDTLDGFGGNDVIDGGAGDDLLIEADFSSTTDALNIDDTSS 755
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVV----------------------------IG 282
+I ++IA IE+++ SG+D +
Sbjct: 756 KTIN--TGGLSIANIETIENLLTGSGDDTINYVNFRDYSIDTGAGDDVINTGAGDDVIRA 813
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ G++ DG G D + ++ I + ++ E
Sbjct: 814 GEGNDTVNAGLGSNTADGGEGTDLLVADFSDLISSGITMSSSFIT---GGNTTSVNANFE 870
Query: 343 RLRFADQCIDSVNVKQRSI 361
+
Sbjct: 871 NFDITGTNQADSLKGDANA 889
Score = 40.5 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 54/177 (30%), Gaps = 16/177 (9%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G+++ + T G DLL DL G + + +
Sbjct: 803 NTGAGDDVIRAGEGNDTVNAGLGSNTADGGEGTDLLVADFSDLISSGITMSSSFITGGNT 862
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+S+ +N I +S+ G + D + G ++ GNDV DG +G D
Sbjct: 863 TSVNANFENFDITGTNQADSLKGDANADTLNGGDGDDTLDGFGGNDVIDGGAGDDLINLG 922
Query: 311 APSYLYKIYRF---ENAIIVYDANEHKQDFLS-----DVERLRFADQCIDSVNVKQR 359
A + + I D LS V+ + F D+
Sbjct: 923 ADTDTDTVTYNLGDGTDTINQFVRGVGGDILSFNGFQGVDVVSFNDRTQFHAQDGAS 979
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ G + TI +++ G +GND + G + + SGND
Sbjct: 185 LNGSNGDDTILGGGGDDTINGGAGNDSIDGGTGIDSIDGGSGNDTI 230
>gi|1000001|pdb|1CGF|A Chain A, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
Collagenase Complexed To Itself
gi|1000002|pdb|1CGF|B Chain B, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
Collagenase Complexed To Itself
Length = 162
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 57/189 (30%), Gaps = 49/189 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W +RY+ + T D+ A WS V LTF + S +DI
Sbjct: 7 RWEQTHLRYRIENYTPDLPRADV-------DHAIEKAFQLWSNVTPLTFTKVSEGQADIM 59
Query: 81 FIS------SNNGYVCTPRYDSRYF-------MEINFDKADVWRYGIGKGTILSHNALHE 127
N+ + + F + +FD+ + W + L A HE
Sbjct: 60 ISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLHRVAAHE 118
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H +M +F D
Sbjct: 119 LGHSLGLSHSTDIGA-------------------LM--------YPSYTFSGDVQLAQDD 151
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 152 IDGIQAIYG 160
>gi|67923823|ref|ZP_00517284.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
gi|67854322|gb|EAM49620.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
Length = 382
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 11/113 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D L+ + + I E N T+ + + + G G+D ++G +
Sbjct: 151 GSGNDNLNFSGTTADQQ----------DIYSGEGNDTVVGGSSRDRIRGEDGDDSLVGGA 200
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+ + GND +G G D S + + +V+D + D
Sbjct: 201 GNDSLYGQDGNDTLEGGDGNDILDPGIGSDSV-VGGSGSDRLVFDRSSETADV 252
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D L+L+ + I + + +GG ++ I +S+VG +GND + G
Sbjct: 287 GSGNDNLNLSGTTADQQDIYSGEGNDTVVGGSSRD-RIRGEDGDDSLVGGAGNDSLYGQD 345
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N+ GND+ D G D+ +
Sbjct: 346 GNDTLEGGDGNDILDPGIGSDSVVGGSG 373
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 7/128 (5%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSSIGGYEKNMT- 261
++ + D I T + G D T +++ +L S +
Sbjct: 242 VFDRSSETADVTIIYTDSNVDGTITGGVNDGTTFREIESVDELRLGSGNDNLNLSGTTAD 301
Query: 262 ---IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I ++VVG S D + G ++ +GND G G DT + +
Sbjct: 302 QQDIYSGEGNDTVVGGSSRDRIRGEDGDDSLVGGAGNDSLYGQDGNDTLEGGDGNDILDP 361
Query: 319 YRFENAII 326
++++
Sbjct: 362 GIGSDSVV 369
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 42/127 (33%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + ++ + +++ G GND + G N++ +D G SG D +
Sbjct: 50 NITGTNGDDSLVGTSSNDNISGLEGNDTLEGGDGNDILDPGIRSDSVVGGSGSDHLVFDR 109
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S + V + + + D+ + TA +D+
Sbjct: 110 SSETADVTIIYTDSNVDGTITGGVNDGTTFREIESVDELRLGSGNDNLNFSGTTADQQDI 169
Query: 372 IQVIGQD 378
G D
Sbjct: 170 YSGEGND 176
>gi|253999691|ref|YP_003051754.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium-binding
protein [Methylovorus sp. SIP3-4]
gi|253986370|gb|ACT51227.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium binding
protein [Methylovorus sp. SIP3-4]
Length = 1905
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 13/194 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y ++ + + TL V+N T + + G
Sbjct: 1215 GGAGNDTYYVDSTSDVVTEASSAGTDLVYSTITYTLTTNVENLTLTGTTAGLTGTGNTLA 1274
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ ++ ++ G +GND +IG + N++ GND G +G DT++ + S + +
Sbjct: 1275 NVLTANSAGSTLYGLTGNDTLIGGAGNDILDGGGGNDTMTGGAGDDTYYVDSTSDV--VT 1332
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-----------ILEYTASY 368
+A + ++VE L L A
Sbjct: 1333 EASSAGTDLIYSTVSYTLSTNVENLTLTGTTASLTATGNTQDNILTANSAGSTLSGLAGN 1392
Query: 369 EDLIQVIGQDVFES 382
+ LI G D
Sbjct: 1393 DTLIGGAGADTLNG 1406
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 6/219 (2%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYEK 258
G GN+ Y ++ + + T+ V+N + T S G
Sbjct: 1115 GGAGNDTYYVDNTADTITEAASAGTDLVYSTVTYTISANVENLTLTGTTAGLSGTGNTLD 1174
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ +A ++ G +GND + G + ++ +GND G +G DT++ + S +
Sbjct: 1175 NVLVANSAG-STLYGLAGNDTLTGGNGADILDGGAGNDTMAGGAGNDTYYVDSTSDVVTE 1233
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+VY + + L + ++L ++ L + G D
Sbjct: 1234 ASSAGTDLVYSTITYTLTTNVENLTLTGTTAGLTGTGNTLANVLTANSAGSTLYGLTGND 1293
Query: 379 --VFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRN 413
+ + + G D Y+ S D+
Sbjct: 1294 TLIGGAGNDILDGGGGNDTMTGGAGDDTYYVDSTSDVVT 1332
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 19/212 (8%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEK 258
G GN+ Y ++ + T Y S G DL+ ++ N +L + G
Sbjct: 1599 GGTGNDTYYVDNVGD----VVTEYASEGTDLVSSSVSYTLGANVENLT------LSGSTA 1648
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+T +T+ + +S + G + N+ +GND+ DG +G DT A + Y
Sbjct: 1649 GLTATGNTLDNVLTANSAGSTLYGLAGNDTLTGGAGNDILDGGTGADTMAGGAGNDTY-- 1706
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
Y + +V +A D + AD + + S T + D
Sbjct: 1707 YVDSTSDVVTEAAGAGTDLICTSVSCTLADNVENGTLLNNVSAQTLTGNTLD-----NVL 1761
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ GL + + F+S YL + D
Sbjct: 1762 TSSTYADTLIGGLGNDK-MVFNSSNYLSAIAD 1792
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/297 (16%), Positives = 89/297 (29%), Gaps = 41/297 (13%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
Y + + EN + + S ++ + A +S + + G
Sbjct: 1343 YSTVSYTLSTNVENLTLTGTTASLTATGNTQDNILTANSAGSTLSGLAGNDTLIGGAGAD 1402
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
N + D GD + + + G DL S + N+
Sbjct: 1403 TLNGGTGADSMAGGLGNDTYYVDDAGDVVTEASSAGT-----DLVYASITYTLAAGNNVE 1457
Query: 262 IAQHTVIESVVGSSG--NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T ++ G+ ++V+ GNS N +GND DG +G DT + Y +
Sbjct: 1458 NLTLTGSSNLNGTGNELDNVITGNSGANTLSGGAGNDTLDGGTGADTMLGGTGNDTYYVD 1517
Query: 320 RFENAIIVYDANEHKQDFLS-----------DVERLRFADQCIDSVNVKQ---------- 358
+ +V +A+ D + +VE L + +
Sbjct: 1518 NVGD--VVTEASSAGTDLVYASITYTLAAGNNVENLTLTGSSNLNGTGNELDNVITGNSG 1575
Query: 359 RSILEYTASYEDLIQVIGQDVF-----------ESMKHFYEFGLSEGRDITFDSYLY 404
+ L A + L G D +++ SEG D+ S Y
Sbjct: 1576 ANTLSGGAGNDTLNGGTGADTMLGGTGNDTYYVDNVGDVVTEYASEGTDLVSSSVSY 1632
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 77/236 (32%), Gaps = 34/236 (14%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVKNYIDLNTESWSSIGGY 256
G GN+ Y ++ + T S G DL+ + + N +L S++ G
Sbjct: 1507 GGTGNDTYYVDNVGD----VVTEASSAGTDLVYASITYTLAAGNNVENLTLTGSSNLNGT 1562
Query: 257 EKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+++V+ G+SG + + G + N+ +G D G +G DT++ +
Sbjct: 1563 --------GNELDNVITGNSGANTLSGGAGNDTLNGGTGADTMLGGTGNDTYYVDNVGDV 1614
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-----------QRSILEY 364
Y E +V ++ ++VE L + S L
Sbjct: 1615 VTEYASEGTDLV--SSSVSYTLGANVENLTLSGSTAGLTATGNTLDNVLTANSAGSTLYG 1672
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
A + L G D+ + G + Y+ S D+
Sbjct: 1673 LAGNDTLTGGAGNDILDGGTGADTMAGGAG-----NDTYYVDSTSDVVTEAAGAGT 1723
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 61/194 (31%), Gaps = 13/194 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++ Y ++ + TL V+N T + + G +
Sbjct: 815 GGAGDDTYYVDDSADTITEASNAGSDQVFSTVSYTLSNNVENLTLTGTTTGLTATGNSLD 874
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + V S+ G +GND + G + N++ +G D G G DT YY I
Sbjct: 875 NILVANAVGSSLYGLAGNDTLTGGAGNDILDGGTGTDAMAGGLGNDT--YYVDDSADTIT 932
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCID-----------SVNVKQRSILEYTASY 368
NA + ++VE L S + A
Sbjct: 933 EASNAGTDQVFSTVSYTLANNVENLTLTGTTAGLTGTGNTLDNMLTANSAGSSMYGLAGN 992
Query: 369 EDLIQVIGQDVFES 382
+ L G D+ +
Sbjct: 993 DTLTGGAGNDILDG 1006
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 13/194 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G LG++ Y ++ + TL G V+N T + + G +
Sbjct: 515 GGLGDDTYYVDDSADTISEASNAGADQVYSTVSYTLSGNVENLTLTGTTAGLTGTGNSLD 574
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ ++ S+ G +GND + G + N++ +G D G +G D ++
Sbjct: 575 NVLTANSAGSSLYGLAGNDTLTGGAGNDILDGGTGTDTMAGGAGDDIYYVDNVGDAVSEN 634
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCI-----------DSVNVKQRSILEYTASY 368
E +V + +++VE L V S L A
Sbjct: 635 AAEGTDLVSSSIS--YTLVANVENLTLTGTTTGLIGTGNSLDNVLVANAAGSTLYGLAGN 692
Query: 369 EDLIQVIGQDVFES 382
+ L G D+ +
Sbjct: 693 DTLTGGAGADILDG 706
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 74/240 (30%), Gaps = 41/240 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDD----LLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ GN+ Y ++ + T G D + TL+ V+N T + + G
Sbjct: 415 GAAGNDTYYVDNVGD----VVTENAGQGTDLVLSSISYTLVSNVENLTLTGTTAGLTGTG 470
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + ++ S+ G +GND + G + N++ +G D G G DT YY
Sbjct: 471 NTLDNVLTANSAGSSLYGLAGNDTLTGGAGNDIMDGGTGTDTMAGGLGDDT--YYVDDSA 528
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI-----------DSVNVKQRSILEY 364
I NA + +VE L S L
Sbjct: 529 DTISEASNAGADQVYSTVSYTLSGNVENLTLTGTTAGLTGTGNSLDNVLTANSAGSSLYG 588
Query: 365 TASYEDLIQVIGQDVFES--------------------MKHFYEFGLSEGRDITFDSYLY 404
A + L G D+ + + +EG D+ S Y
Sbjct: 589 LAGNDTLTGGAGNDILDGGTGTDTMAGGAGDDIYYVDNVGDAVSENAAEGTDLVSSSISY 648
Score = 45.9 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 67/198 (33%), Gaps = 8/198 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFI-QTIYDSG-GDDLL------DLTLIGGVKNYIDLNTESWS 251
S G+ +Y + + I D G G D + D + + + + +
Sbjct: 1664 NSAGSTLYGLAGNDTLTGGAGNDILDGGTGADTMAGGAGNDTYYVDSTSDVVTEAAGAGT 1723
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + T+A + +++ + + GN+ +NV S+ D G G D + +
Sbjct: 1724 DLICTSVSCTLADNVENGTLLNNVSAQTLTGNTLDNVLTSSTYADTLIGGLGNDKMVFNS 1783
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+YL I + + ++ L ++++V S S +
Sbjct: 1784 SNYLSAIADGGSGTDTLKITGLASSTVINLSSLAANVTNTEAMDVADGSSEFIKISASAI 1843
Query: 372 IQVIGQDVFESMKHFYEF 389
++GQ + +
Sbjct: 1844 QSIVGQGTSSTFSLVLDS 1861
>gi|237801267|ref|ZP_04589728.1| hemolysin-type calcium-binding region:hemolysin-type calcium
binding related protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024126|gb|EGI04183.1| hemolysin-type calcium-binding region:hemolysin-type calcium
binding related protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 186
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++A + + G GND++ G S N+ + +GND G +G D + LY+ R
Sbjct: 5 SLAGLDGNDELHGLGGNDILSGGSGNDQLYGDAGNDTLTGGAGNDRLSGGLGNDLYQFER 64
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ ++ D + + ADQ
Sbjct: 65 GDGQDVIDDFDPDANTDVLQFGADIAADQ 93
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + N + + + G SGND + G++ N+ +GND G G D + +
Sbjct: 5 SLAGLDGNDELHGLGGNDILSGGSGNDQLYGDAGNDTLTGGAGNDRLSGGLGNDLYQFER 64
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
I F+ D + D +D
Sbjct: 65 GDGQDVIDDFDPDA-NTDVLQFGADIAAD 92
>gi|225075068|ref|ZP_03718267.1| hypothetical protein NEIFLAOT_00067 [Neisseria flavescens
NRL30031/H210]
gi|224953552|gb|EEG34761.1| hypothetical protein NEIFLAOT_00067 [Neisseria flavescens
NRL30031/H210]
Length = 189
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 11/155 (7%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
S + Y T + DI+ + G++ V ++ +
Sbjct: 25 SPLAQATTGTSEDDVYYVT-LSDDII-------IENPNSGDDTVCSNVSYTLPNHVKNLV 76
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+G ++ G + I E + + + T+ +++ G GND + G
Sbjct: 77 LTG---TANIFAAGNNSHNILTGNEGRNRLNSGRGDDTVYGMGGNDNLNGGDGNDYLDGG 133
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ +G+D+ G G D A + Y +
Sbjct: 134 DGNDAINGDAGDDILVGGKGKDILKGEAGNDTYSL 168
>gi|291297795|ref|YP_003509073.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290567015|gb|ADD39980.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 729
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 7/150 (4%)
Query: 203 GNNIYKIEVQQ--KDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSS-IGG 255
+ +Y E + GDD + D + G+ L S + G
Sbjct: 402 DDQVYGHEGDDLVDGGAGHDYLDGQDGDDNISGGADKDTVYGLDGDDTLTGGSGRDYLEG 461
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N TI T + V G G+D + G+ ++V + +G D DG G D F +
Sbjct: 462 AEGNDTIGGGTEEDVVSGGRGDDNLHGDDGDDVMYAGAGKDTLDGGEGNDKQFVQDEDKV 521
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLR 345
V D++ ++ + D ++
Sbjct: 522 ASDGVAPGMWGVNDSDTVQKVDIVDNSYIQ 551
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 7/127 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+ G + I T + + SG+D V G+ +++ +G+D DG G D
Sbjct: 376 STTFGGTGDDEIQGSTKDDKISAGSGDDQVYGHEGDDLVDGGAGHDYLDGQDGDDNISGG 435
Query: 311 APSYLYKIYRFENAIIVYDANE-----HKQDFLSDV--ERLRFADQCIDSVNVKQRSILE 363
A ++ + + D + E + + D+++ +
Sbjct: 436 ADKDTVYGLDGDDTLTGGSGRDYLEGAEGNDTIGGGTEEDVVSGGRGDDNLHGDDGDDVM 495
Query: 364 YTASYED 370
Y + +D
Sbjct: 496 YAGAGKD 502
>gi|32456007|ref|NP_862009.1| rb134 [Ruegeria sp. PR1b]
gi|22726359|gb|AAN05155.1| RB134 [Ruegeria sp. PR1b]
Length = 825
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 38/128 (29%), Gaps = 1/128 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I + + G G D +IG S N+ G+D G +G DT
Sbjct: 514 FDGQDGDDRIDGGAGNDQIFGGFGADSLIGGSGNDALLGGLGDDQLSGGAGADTLSGELG 573
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ DA + + +RL D L + L
Sbjct: 574 EDWLS-GGEGGDLLNGDAGNDRLFGEAGSDRLFGGDGNDLLSGGSDNDQLFGGYGNDLLR 632
Query: 373 QVIGQDVF 380
G D
Sbjct: 633 GNAGNDQL 640
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 52/147 (35%), Gaps = 6/147 (4%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ GG D L + L GG + + + + G T+ + + G
Sbjct: 665 NILMGGGGQDRLQSGRGEDVLKGGAGDDLLVARGGADRLFGGSGRDTLKAGLGDDVLNGG 724
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G D ++G + + GND+ G G D F + +I F D ++
Sbjct: 725 NGADRLLGGAGRDELLGGRGNDILRGGGGADVFVFTRGHGQDRIQDFRPGTDQLDLSDLN 784
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSI 361
Q + D+E R + + + +
Sbjct: 785 QRY-GDLEISRAGNATLIDTGAGEIQL 810
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 14/168 (8%)
Query: 223 YDSGGD--DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ SGG+ DLL+ G N + G + N ++ + + + G GND++
Sbjct: 576 WLSGGEGGDLLN----GDAGNDRLFGEAGSDRLFGGDGNDLLSGGSDNDQLFGGYGNDLL 631
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEH 333
GN+ N+ F +GND G G D ++ ++
Sbjct: 632 RGNAGNDQLFGGAGNDRLLGLVGNDLLKDIHGDNILMGGGGQDRLQSGRGEDVLKGGAGD 691
Query: 334 KQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVF 380
F D++ +L + L+ G+D
Sbjct: 692 DLLVARGGADRLFGGSGRDTLKAGLGDDVLNGGNGADRLLGGAGRDEL 739
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 59/190 (31%), Gaps = 30/190 (15%)
Query: 204 NNIYKIEVQQKDSPFIQT-IYDS-GGDDLLDLTLIGGVKNYI------DLNTESWSS-IG 254
+ +Y + + I+D GDD +D G L S + +
Sbjct: 494 DTVYGSAEGDQLAGTASADIFDGQDGDDRID--GGAGNDQIFGGFGADSLIGGSGNDALL 551
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + ++ +++ G G D + G ++ +GND G +G D F +
Sbjct: 552 GGLGDDQLSGGAGADTLSGELGEDWLSGGEGGDLLNGDAGNDRLFGEAGSDRLFGGDGND 611
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
L + + D L L A + L+ +
Sbjct: 612 LLS----GGSDNDQLFGGYGNDLLRG---------------NAGNDQLFGGAGNDRLLGL 652
Query: 375 IGQDVFESMK 384
+G D+ + +
Sbjct: 653 VGNDLLKDIH 662
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 60/205 (29%), Gaps = 46/205 (22%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN--------------------------- 259
G+D +DL+ +++ L +S S N
Sbjct: 423 GEDEIDLSAFVSLRSLAGLTAQSRSDGILLTHNDQRILVQSHNGQALELDDIWPAGLGSP 482
Query: 260 -----------MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
T+ + + G++ D+ G ++ +GND G G D+
Sbjct: 483 HRWLAGETYPCDTVYGSAEGDQLAGTASADIFDGQDGDDRIDGGAGNDQIFGGFGADSLI 542
Query: 309 YYAPSYLY-----KIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSI 361
+ + A + E +D+LS E L D D + + S
Sbjct: 543 GGSGNDALLGGLGDDQLSGGAGADTLSGELGEDWLSGGEGGDLLNGDAGNDRLFGEAGSD 602
Query: 362 LEYTASYEDLIQVIGQDVFESMKHF 386
+ DL+ G D + +
Sbjct: 603 RLFGGDGNDLLSG-GSDNDQLFGGY 626
>gi|113477363|ref|YP_723424.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168411|gb|ABG52951.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 393
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 17/184 (9%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNM 260
+ I+ I + + +G G+D + G +N +L + I G +N
Sbjct: 182 DTIFGESGNDSLFGIIGSDFINGNRGND-----QVFGGENADNLRGGKGNDTIFGELEND 236
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYYA 311
++ + + V+G G+D + G N+ S GND + G G DT
Sbjct: 237 SLFGDSNNDLVIGGIGDDTLFGGKNNDTLQGSDGNDSLLGDLGNDILFGGGGEDTLTGGE 296
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + +I + + +DFL+ L F D T + + L
Sbjct: 297 GEDTFVLPGELGSIDIINDFNPLEDFLALSGNLTFEDLSFQQQTGLNFRDTLITINNDRL 356
Query: 372 IQVI 375
+ ++
Sbjct: 357 LAIL 360
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 11/142 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQHTVIESVVGSSGNDVV 280
GG+D + ++ D E + IG G E N + + G G+D +
Sbjct: 26 GGNDTIFGEKGDDTQSGGDGVDEIFGGIGSDSLIGGEDNDFLKAEDGRDLAFGGPGDDSI 85
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G N+ +GND G +G D + Y I N + D L
Sbjct: 86 EGGPGNDTLTGENGNDSLFGETGDD-LIIGSQGLDYIIGGGGNDTL---RGNQGNDSLVG 141
Query: 341 V--ERLRFADQCIDSVNVKQRS 360
+ L F DQ D+ + +
Sbjct: 142 NVDDDLIFGDQGNDTGSGGTGN 163
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 24/187 (12%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-- 267
S + I GG+D L + +L+G V + + + + G N ++
Sbjct: 114 GSQGLDYIIGGGGNDTLRGNQGNDSLVGNVDDDLIFGDQGNDTGSGGTGNDSLLGGDGDD 173
Query: 268 -------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+++ G SGND + G ++ + GND G D +
Sbjct: 174 SLDGGSGNDTIFGESGNDSLFGIIGSDFINGNRGNDQVFGGENADNLRGGKGND-TIFGE 232
Query: 321 FENAIIVYDANEH------KQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
EN + D+N D L + + L+ +D + IL + L
Sbjct: 233 LENDSLFGDSNNDLVIGGIGDDTLFGGKNNDTLQGSDGNDSLLGDLGNDILFGGGGEDTL 292
Query: 372 IQVIGQD 378
G+D
Sbjct: 293 TGGEGED 299
Score = 41.6 bits (96), Expect = 0.39, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 5/94 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + N + + + G GND + G ++ G D G G D+
Sbjct: 3 NILGDDNNNFLIGSPEPDLMEGFGGNDTIFGEKGDDTQSGGDGVDEIFGGIGSDSLIGGE 62
Query: 312 PSYLYKIYR-----FENAIIVYDANEHKQDFLSD 340
+ K F D L+
Sbjct: 63 DNDFLKAEDGRDLAFGGPGDDSIEGGPGNDTLTG 96
Score = 40.5 bits (93), Expect = 0.90, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 23/182 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
P +I G+D L T G + I G + I +++ G+
Sbjct: 78 GGPGDDSIEGGPGNDTL--TGENGNDSLF--GETGDDLIIGSQGLDYIIGGGGNDTLRGN 133
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGS------------------SGLDTFFYYAPSYLY 316
GND ++GN +++ F GND G SG DT F + +
Sbjct: 134 QGNDSLVGNVDDDLIFGDQGNDTGSGGTGNDSLLGGDGDDSLDGGSGNDTIFGESGNDSL 193
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ I + + + + LR + L ++ + +I IG
Sbjct: 194 -FGIIGSDFINGNRGNDQVFGGENADNLRGGKGNDTIFGELENDSLFGDSNNDLVIGGIG 252
Query: 377 QD 378
D
Sbjct: 253 DD 254
>gi|260430639|ref|ZP_05784611.1| beta-Ig-H3/fasciclin [Silicibacter lacuscaerulensis ITI-1157]
gi|260418080|gb|EEX11338.1| beta-Ig-H3/fasciclin [Silicibacter lacuscaerulensis ITI-1157]
Length = 555
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 4/122 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ G D + G N + G + + + +++ G G+D V
Sbjct: 403 VFGGSGSDTVK----GEAGNDFVFGGRGKDDLSGGDGHDRLFGGRGRDTISGGDGDDTVF 458
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G +++ +GND G G D F + I+ F D + + ++
Sbjct: 459 GGHGSDMIAGGAGNDRLFGGGGADHFAFAHGDGTDVIFGFRAGQDKIDLSSYGFTDFHEL 518
Query: 342 ER 343
E
Sbjct: 519 ES 520
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 45/152 (29%), Gaps = 11/152 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDD D G + +D + G ++ +A + V G SG+D V G + N
Sbjct: 360 GDDGRDRIWTGRDNDLVDAKGGNDVVWAGSGSDLVLA-GAGNDRVFGGSGSDTVKGEAGN 418
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHKQDFL--- 338
+ F G D G G D F F A D L
Sbjct: 419 DFVFGGRGKDDLSGGDGHDRLFGGRGRDTISGGDGDDTVFGGHGSDMIAGGAGNDRLFGG 478
Query: 339 SDVERLRFA--DQCIDSVNVKQRSILEYTASY 368
+ FA D + +SY
Sbjct: 479 GGADHFAFAHGDGTDVIFGFRAGQDKIDLSSY 510
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 12/143 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ V+G G D + N++ GNDV SG D A + + +
Sbjct: 355 VDFVIGDDGRDRIWTGRDNDLVDAKGGNDVVWAGSGSDLVLAGAGNDRVFGGSGSDTVKG 414
Query: 328 YDANEH-----KQDFLSDVERL--RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD-- 378
N+ +D LS + F + D+++ + D+I +
Sbjct: 415 EAGNDFVFGGRGKDDLSGGDGHDRLFGGRGRDTISGGDGDDTVFGGHGSDMIAGGAGNDR 474
Query: 379 --VFESMKHFYEFGLSEGRDITF 399
HF F +G D+ F
Sbjct: 475 LFGGGGADHFA-FAHGDGTDVIF 496
>gi|284054068|ref|ZP_06384278.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Arthrospira
platensis str. Paraca]
Length = 116
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I G + + I +++ G G+D + GN+ +++ F ++GND+ G G DT F
Sbjct: 57 IYGNQGDDQIFGGGGNDTLYGGQGDDYIEGNAGDDLIFGNAGNDILSGGLGNDTIFGG 114
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
I + + + G GND + G ++ ++G+D+ G++G D +
Sbjct: 57 IYGNQGDDQIFGGGGNDTLYGGQGDDYIEGNAGDDLIFGNAGNDILSGGLGNDT 110
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ + G+ G+D + G N+ + G+D +G++G D F A + +
Sbjct: 42 GSGNDTVRSLVDPTLIYGNQGDDQIFGGGGNDTLYGGQGDDYIEGNAGDDLIFGNAGNDI 101
Query: 316 YKIYRFENAI 325
+ I
Sbjct: 102 LSGGLGNDTI 111
>gi|254480962|ref|ZP_05094208.1| glycosyl transferase, group 2 family [marine gamma proteobacterium
HTCC2148]
gi|214038757|gb|EEB79418.1| glycosyl transferase, group 2 family [marine gamma proteobacterium
HTCC2148]
Length = 657
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 20/129 (15%)
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 443
H Y + GR FD Y SY S+ + HY+T G + G NP A F
Sbjct: 12 HAYRHIRATGR---FDPSFY-ASY--------SNSKSPLWHYVTLGWRLGNNPAADFDTN 59
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG--SYDDLRNVFGS 501
Y+A + D+ + + H+ G E R + Y ++R+ +
Sbjct: 60 IYLAQNPDVARSAETIHPFL-----HYLQHGEGEARGGSVADSSYDEWIQNYEMRSALDA 114
Query: 502 DRGAAARHY 510
+ A Y
Sbjct: 115 QKELARLKY 123
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 7/99 (7%)
Query: 377 QDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ + H+ G G + FD+ +YL D+ ++ HY+ HG E
Sbjct: 32 SNSKSPLWHYVTLGWRLGNNPAADFDTNIYLAQNPDV--ARSAETIHPFLHYLQHGEGEA 89
Query: 435 RNPDAFKALEYIA--SHEDLINAFADAPDLVQVGKDHFS 471
R + Y + ++ +A +L ++
Sbjct: 90 RGGSVADSS-YDEWIQNYEMRSALDAQKELARLKYKPLI 127
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 16/105 (15%)
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FN 568
H + R F Y AS+ + ++ H+ G+ G + F+
Sbjct: 10 NLHAYRHIRATGRFDPSFY-ASYSN-----------SKSPLWHYVTLGWRLGNNPAADFD 57
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFK 613
++YL D+ ++ HY+ HG E R ++ +
Sbjct: 58 TNIYLAQNPDVARS--AETIHPFLHYLQHGEGEARGGSVADSSYD 100
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 35/105 (33%), Gaps = 18/105 (17%)
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
H GR FD Y SY + + HY+T G + G NP A F
Sbjct: 12 HAYRHIRATGR---FDPSFY-ASYS--------NSKSPLWHYVTLGWRLGNNPAADFDTN 59
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
Y+A + D+ + H+ G E R + Y
Sbjct: 60 IYLAQNPDVARSAE-----TIHPFLHYLQHGEGEARGGSVADSSY 99
>gi|115467320|ref|NP_001057259.1| Os06g0239100 [Oryza sativa Japonica Group]
gi|51535159|dbj|BAD37871.1| putative metalloproteinase [Oryza sativa Japonica Group]
gi|51535823|dbj|BAD37908.1| putative metalloproteinase [Oryza sativa Japonica Group]
gi|113595299|dbj|BAF19173.1| Os06g0239100 [Oryza sativa Japonica Group]
gi|125596648|gb|EAZ36428.1| hypothetical protein OsJ_20758 [Oryza sativa Japonica Group]
Length = 371
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 57/203 (28%), Gaps = 49/203 (24%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD--- 78
W + + T + S D L+ V A WS L F E + +D
Sbjct: 159 RWPRSRTTLRYAITATSQTSIDRATLSK----VFASAFARWSAATTLNFTEAASAADADI 214
Query: 79 -IKFISSNNG----YVCTPRYDSRYFMEIN-----------FDKADVWRYGIGKGTILSH 122
I F ++G + + F N DV R L
Sbjct: 215 TIGFYGGDHGDGEAFDGPLGTLAHAFSPTNGRLHLDASEAWVAGGDVTRASSNAAVDLES 274
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A+HEIGH LGL H + + S+M S
Sbjct: 275 VAVHEIGHILGLGHSSAAD-------------------SIM-------FPTLTSRTKKVN 308
Query: 183 PMVSDIVAVQKIYGAPKGSLGNN 205
D+ +Q +YG G
Sbjct: 309 LATDDVAGIQGLYGNNPNFKGVT 331
>gi|254560784|ref|YP_003067879.1| hypothetical protein METDI2332 [Methylobacterium extorquens DM4]
gi|254268062|emb|CAX23934.1| conserved hypothetical protein; hemolysin-type calcium-binding
repeat domain [Methylobacterium extorquens DM4]
Length = 751
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 74/230 (32%), Gaps = 36/230 (15%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
D TP DI A G++ + GGDDL
Sbjct: 381 GGTDGDDLILGTPCADDIAA----------GAGDD---------------NVDARGGDDL 415
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D G + I + ++ G + + + V G +G+D + G + +++ F
Sbjct: 416 VDAG--SGSDHVIAGDGAD--TVLGGPGDDVVFAGAGADRVSGGAGHDRLFGEAGDDLLF 471
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G+D+ DG G D L +++ + + + L
Sbjct: 472 GEAGDDLLDGGEGRDILDGGDGDDLLLGGEGNDSLYGAAGADDLSGG-TGADVLVGDAGD 530
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVF----ESMKHFYEFGLSEGRD 396
+ IL A + + G DV +S + + G GRD
Sbjct: 531 DRLQGGEGADILSDGAGRDLVSGEAGDDVIILALDSAEDTVDGGA--GRD 578
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ GDDLLD GG I + + G E N ++ + + G +G DV++
Sbjct: 470 LFGEAGDDLLD----GGEGRDILDGGDGDDLLLGGEGNDSLYGAAGADDLSGGTGADVLV 525
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--------KIYRFENAIIVYDANEH 333
G++ ++ G D+ +G D A + D +
Sbjct: 526 GDAGDDRLQGGEGADILSDGAGRDLVSGEAGDDVIILALDSAEDTVDGGAGRDTLDLSAA 585
Query: 334 KQDFLSDVER 343
D + D+
Sbjct: 586 TVDLVVDLRN 595
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 47/154 (30%), Gaps = 5/154 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I + + + V SG+D VI + G+DV +G D A
Sbjct: 397 DIAAGAGDDNVDARGGDDLVDAGSGSDHVIAGDGADTVLGGPGDDVVFAGAGADRVSGGA 456
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ +A + D + L D + + L A +DL
Sbjct: 457 GHDRL-FGEAGDDLLFGEAGDDLLDGGEGRDILDGGDGDDLLLGGEGNDSLYGAAGADDL 515
Query: 372 IQVIGQDVFESMK--HFYEFGLSEGRDITFDSYL 403
G DV + G EG DI D
Sbjct: 516 SGGTGADVLVGDAGDDRLQGG--EGADILSDGAG 547
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+++ + + + T+ G D LDL+ V +DL E+ S + +
Sbjct: 555 AGDDVIILALDSAED----TVDGGAGRDTLDLSAAT-VDLVVDLRNETVS-----AQELG 604
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + T +E+++ SG+D + + V G DV
Sbjct: 605 LDRITSVEAIIAGSGDDRFVVGGRDLVLTGGGGGDV 640
>gi|221134340|ref|ZP_03560645.1| putative lipoprotein [Glaciecola sp. HTCC2999]
Length = 3599
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 36/88 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N + I+++ G GND + G +AN++ + +G+D G G DT A
Sbjct: 2844 VDAGGANDKVIGGRDIDTLRGGDGNDHLYGQAANDLLYGDAGDDKLAGGLGNDTLDGGAG 2903
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
L ++ + ++ + +
Sbjct: 2904 DDLLLGEAGDDYFVTGAGDDEAYGSIGN 2931
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 39/110 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + N + + + G +G+D + G N+ +G+D+ G +G D F A
Sbjct: 2861 TLRGGDGNDHLYGQAANDLLYGDAGDDKLAGGLGNDTLDGGAGDDLLLGEAGDDYFVTGA 2920
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ V D S ++L+ I V S
Sbjct: 2921 GDDEAYGSIGNDTFEVNGLGSKLIDGSSGDDKLQINVSGITDVTDLVTSA 2970
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 14/139 (10%)
Query: 204 NNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNM 260
+ +Y ++ + + + I + DD+L G I + S + G +
Sbjct: 3186 DVVYGVDYVLNSAPTSGFENIQGTKQDDVL----TGDDTANI-IYAGLGSDEVYGLAGDD 3240
Query: 261 TI--AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I A T S + G D++ G + +++ + ++G+D DG G D +
Sbjct: 3241 VIYGAYGTANWSSDDNDGADLLFGGAGDDILYGNAGDDELDGGLGQDILWG----DDDSA 3296
Query: 319 YRFENAIIVYDANEHKQDF 337
+ + + D
Sbjct: 3297 NSYTTPDMTDETQTGGTDL 3315
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 60/175 (34%), Gaps = 37/175 (21%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD-----------DLLDLTL 235
D+V + YGA LG D F+ +YD G D + ++ +
Sbjct: 3115 DLVNLLGAYGADSVDLG----------ADDDFLYVMYDEGIDYSSAGIELMDSNTMNRSY 3164
Query: 236 IGGVKNYIDLNTESWSSI----------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
LN + G + + A + E++ G+ +DV+ G+
Sbjct: 3165 ESDTA----LNGGTGIDWLIFRVPNDVVYGVDYVLNSAPTSGFENIQGTKQDDVLTGDDT 3220
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
N+ + G+D G +G D + + + + A +++ D L
Sbjct: 3221 ANIIYAGLGSDEVYGLAGDDVIYGAYGTANWSSDDNDGADLLFGGA--GDDILYG 3273
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 59/188 (31%), Gaps = 20/188 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ I T+ G+D L G N + + G N T+
Sbjct: 2848 GANDKVIGGRDIDTLRGGDGNDHL----YGQAANDLLYGDAGDDKLAGGLGNDTLDGGAG 2903
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDV----------FDGSSGLDTFFYYAPSYLYK 317
+ ++G +G+D + + ++ + S GND DGSSG D
Sbjct: 2904 DDLLLGEAGDDYFVTGAGDDEAYGSIGNDTFEVNGLGSKLIDGSSGDDKLQINVSGITDV 2963
Query: 318 IYRFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+A Y D L ++E A ++++ + A Y+ + Q
Sbjct: 2964 TDLVTSADGDYTVLSRADDSLVVRFKNIEHFEIAGVSYEAISQGYNA--TDAAYYQSVAQ 3021
Query: 374 VIGQDVFE 381
Q
Sbjct: 3022 HTPQSSDT 3029
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 39/119 (32%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I + + V+G D + G N+ + + ND+ G +G D
Sbjct: 2835 IATRNGVDEVDAGGANDKVIGGRDIDTLRGGDGNDHLYGQAANDLLYGDAGDDKLAGGLG 2894
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ ++ +++ D E VN +++ ++ + L
Sbjct: 2895 NDTLDGGAGDDLLLGEAGDDYFVTGAGDDEAYGSIGNDTFEVNGLGSKLIDGSSGDDKL 2953
Score = 37.8 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 46/162 (28%), Gaps = 27/162 (16%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG--------------- 282
G+ I L ++ + G E T AQ + V+ + D +G
Sbjct: 2787 GIDTAISLAAQTVTDPFGLE---TTAQFPNADIVILTQQADTFVGTDASELIATRNGVDE 2843
Query: 283 ---NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
AN+ D G G D + A + L + +A A D L
Sbjct: 2844 VDAGGANDKVIGGRDIDTLRGGDGNDHLYGQAANDLL----YGDAGDDKLAGGLGNDTLD 2899
Query: 340 D--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ L + D Y + D +V G
Sbjct: 2900 GGAGDDLLLGEAGDDYFVTGAGDDEAYGSIGNDTFEVNGLGS 2941
>gi|110681159|ref|YP_684166.1| type I secretion protein [Roseobacter denitrificans OCh 114]
gi|109457275|gb|ABG33480.1| probable type I secretion protein [Roseobacter denitrificans OCh
114]
Length = 308
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 50/156 (32%), Gaps = 20/156 (12%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ P ++ +GG + +D + I+ +
Sbjct: 138 VVGQGAGDVGRPTESSVVITGGTEQIDRSPAPEPAQTIEGSEGR---------------- 181
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G +G+DV+ GN + G+DV G G D ++ +
Sbjct: 182 ---DFLRGGTGDDVINGNDGRDRLTGGDGDDVLAGGKGSDVLDGGQGDDVFIFNEGDGFD 238
Query: 326 IVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRS 360
+ + + D L V+ + D + ++ Q +
Sbjct: 239 QIRNFDLLGDDVLQIGVDGIDSLDDFLGALTSTQDA 274
>gi|28898407|ref|NP_798012.1| putative RTX toxin [Vibrio parahaemolyticus RIMD 2210633]
gi|28806624|dbj|BAC59896.1| putative RTX toxin [Vibrio parahaemolyticus RIMD 2210633]
Length = 3240
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND++ G N+ F + ND+ G G D ++K I V
Sbjct: 3088 DTIYGGAGNDILFGQGGNDKLFGGADNDILIGGLGSDILTGGDGEDIFK------WIDVA 3141
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + DF S + L F+D D + +L S
Sbjct: 3142 NERDTVTDFSSSEDSLDFSDLFDDLSKDEVGDLLSDLQS 3180
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
YI N + Y++ TI + + G GND + G + N++ G+D+ G
Sbjct: 3070 YITENQAEFEQSRYYDQADTIYGGAGNDILFGQGGNDKLFGGADNDILIGGLGSDILTGG 3129
Query: 302 SGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G D F + + + F ++ D ++ D D
Sbjct: 3130 DGEDIFKWIDVANERDTVTDFSSSEDSLDFSDLFDDLSKD 3169
>gi|307826028|ref|ZP_07656241.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
gi|307732867|gb|EFO03731.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
Length = 1073
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 38/124 (30%), Gaps = 8/124 (6%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
I + V GNDV+ G N++ +GND+ G G D Y
Sbjct: 237 GADVIYAGAGNDYVWAGQGNDVLFGEDGNDIIMGGAGNDIIGGQQGDDVLIGGTGKDTYL 296
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
R + V D + L F + + LE D + + G
Sbjct: 297 FNRGDGRDTVIDTEKDS--------NLLFGEGISAGDITLRLGSLELDLGNGDQVHIDGF 348
Query: 378 DVFE 381
D +
Sbjct: 349 DPND 352
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 7/125 (5%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G SG D + G ++ +GND G + D A + +Y++
Sbjct: 537 LYGGAGNDRLYGGSGGDRLSGAWGDDTLSGGAGNDTLIGGADRDLLLGGAGNDIYELSAT 596
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A ++ D + + + A+ + ++ + + L + V +
Sbjct: 597 SGADLITD--TEGDNIIRFAADISAANLTVSTLTMAGQPALR-----MKVNGVEDATITS 649
Query: 382 SMKHF 386
+ H+
Sbjct: 650 GVDHY 654
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 33/92 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + TI + + G GND + G + N+ +G D+ G +G DT+
Sbjct: 381 DLDGTSGDDTITGTNTTDRIRGFDGNDTLSGGAGNDSLDGGAGADILMGGAGDDTYLAVT 440
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ N I + AN L
Sbjct: 441 GEDTLTDTQGHNTIQLAQANGVGAGGLKATHY 472
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 38/110 (34%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D D+ V + + S + + + +++ G++ D + G
Sbjct: 346 DGFDPNDVFNSSSVSTFRFADGTELSINQLLARGFDLDGTSGDDTITGTNTTDRIRGFDG 405
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
N+ +GND DG +G D A Y E+ + + Q
Sbjct: 406 NDTLSGGAGNDSLDGGAGADILMGGAGDDTYLAVTGEDTLTDTQGHNTIQ 455
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 37/114 (32%), Gaps = 6/114 (5%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N E + G SG+D +IG N+V GND+ G +G D + Y
Sbjct: 151 GNSQTGSGQKGEWLAGESGDDTLIGGVGNDVITGGGGNDLLIGGAGDDDI---SGDANYV 207
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I + + D + AD D + + + D+
Sbjct: 208 ASDLNWTITTTNGVRQYSPVVGD---MAPADAGADVIYAGAGNDYVWAGQGNDV 258
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+GND + G ++ +G+D+ G+ G D + Y++ R A V++
Sbjct: 823 GSAGNDPLSGTDYRDIILAGAGDDLLIGNGGNDDLHGETGTDTYRLSRGGGADQVFEVEG 882
Query: 333 H 333
Sbjct: 883 E 883
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 41/118 (34%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ D+++ + +++ + GND G +G DT+ +++ E + + +
Sbjct: 832 GTDYRDIILAGAGDDLLIGNGGNDDLHGETGTDTYRLSRGGGADQVFEVEGETSMIEVSA 891
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L+ + + YT +++ ++ E E
Sbjct: 892 YNLSRLTGTRVGEDLLLGVTDADDSLTLKNFYTLNHDWQVKDQTGVPRELTALLAENA 949
Score = 37.4 bits (85), Expect = 8.4, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 7/121 (5%)
Query: 186 SDIVAVQKIYGAP--KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+DI + GA + G+NI + + + G L + + G I
Sbjct: 588 NDIYELSATSGADLITDTEGDNIIRFAADISAANLTVSTLTMAGQPALRMKVNGVEDATI 647
Query: 244 DLNTESWSSIGGYEKNMTIA-----QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ +S MT A ++V G+ D + G A + + GND
Sbjct: 648 TSGVDHYSFEFADGSRMTSAEFLLNFRAEPQTVYGNDTGDTLYGGQAADTLYGQGGNDSL 707
Query: 299 D 299
Sbjct: 708 W 708
>gi|229515816|ref|ZP_04405275.1| autotransporter adhesin [Vibrio cholerae TMA 21]
gi|229347585|gb|EEO12545.1| autotransporter adhesin [Vibrio cholerae TMA 21]
Length = 2630
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 64/221 (28%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+++ +++ + GG K++ + G G+DV +N
Sbjct: 2253 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGTSN 2311
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 2312 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 2370
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ G D+
Sbjct: 2371 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINAGAGNDVV 2430
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N D A + EGR+
Sbjct: 2431 -----KLMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 2466
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 55/205 (26%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQ------------TIYDSGGDDLL---------------D 232
G G++++ + ++ G+D D
Sbjct: 2297 GGRGDDVFYATGTSNIFTGGEGNDMGVLMGRENMMFGGDGNDTAVVAGRINHVFLGAGDD 2356
Query: 233 LTLIGGVKNYID--------LNTESWSSIGGYEK---NMTIAQHTVIESVVGSSGNDV-- 279
+ + G ID + + +++ + + ++TI + +E +GND
Sbjct: 2357 QSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVEL---GAGNDFAN 2413
Query: 280 VIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVYD 329
V GN N +GNDV +G G D A S + E ++V
Sbjct: 2414 VFGN--YNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRDLMVLG 2471
Query: 330 ANEHKQDFLSDVERLRFADQCIDSV 354
++ +DV+ + ID++
Sbjct: 2472 GYQNTFKGGTDVDSFVVSGDVIDNL 2496
Score = 37.8 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTI-AQHTVIES------VVGS 274
D+G D D ++ G N ++L + ++++ G + A + V++ + G
Sbjct: 2385 VDTG--DDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINAGAGNDVVKLMGYHAVLNGG 2442
Query: 275 SGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D +I + + + F G D+ +TF + + +V D
Sbjct: 2443 DGDDHLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRS 2502
Query: 333 HKQDFLSDVE 342
+ ++
Sbjct: 2503 EDNIVFNGID 2512
>gi|186682747|ref|YP_001865943.1| Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
gi|186465199|gb|ACC81000.1| Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
Length = 2999
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 16/165 (9%)
Query: 253 IGGYEKNMTIAQHTVIES---VVGSSGNDVVIGNSANNVFFESSGNDVFDGS-----SGL 304
+ E N TI +E+ V G +G+D + ++ +GND DG
Sbjct: 978 VSAGEGNDTITFINDVEANGQVTGGAGDDNITTGEGDDFLLGGAGNDTLDGGEVGLLDTQ 1037
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D I + QD L ++ + + + ++L
Sbjct: 1038 DKNTADYSDAPNGIVVNLTQGKASNDGYGTQDILIHIQNIVGSSKNDSITGSDDDNVLVG 1097
Query: 365 TASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ LI + G DV + + + G E D+ Y+ S
Sbjct: 1098 DQGNDTLISLEGDDVLLSGAGADYIDGGDDE------DTITYIAS 1136
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 19/117 (16%)
Query: 225 SGGDDLLDLTLIGGVKNY---------------IDLNTESWSSIGGYEKNMTIAQHTVIE 269
G+D LD +G + ++L S+ G +++ I I+
Sbjct: 1020 GAGNDTLDGGEVGLLDTQDKNTADYSDAPNGIVVNLTQGKASNDGYGTQDILI----HIQ 1075
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++VGSS ND + G+ +NV GND G D A + E+ I
Sbjct: 1076 NIVGSSKNDSITGSDDDNVLVGDQGNDTLISLEGDDVLLSGAGADYIDGGDDEDTIT 1132
Score = 53.2 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 17/131 (12%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYI--------DLNTESWSSIGGYEKNMTIAQHT----- 266
+ GDD LD +YI L E ++ GG + ++
Sbjct: 1208 DILIAGPGDDTLDGGTGNDWVSYIRATQGVEVHLVEEDGNTDGGASGDKLLSLRNKDDEP 1267
Query: 267 ----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
IE++ GS+ D + G+ +N+ G+D G+ G DT +
Sbjct: 1268 LSINSIENLQGSNFADTLEGDIGSNILRGEGGSDTLKGNDGNDTLIGGVGADFLDGGTSI 1327
Query: 323 NAIIVYDANEH 333
+ ++
Sbjct: 1328 DWADYSESPGG 1338
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG +G D +IGN ++ + G+D GS+ D K+ +
Sbjct: 1686 DQLVGGNGADTLIGNDGDDSLIGNKGSDSLFGSANNDILIG------VKLGVSPGSGNEI 1739
Query: 329 DANEHKQD----FLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D+ +L D + + D+ + S Q I ++ D+IQ+ G+
Sbjct: 1740 DSLTGGTGKDEFWLGDAREVYYDDENPLTSGFNNQGQITDFNPDEGDIIQLHGKSGD 1796
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 24/132 (18%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDD--LLDLTLIGGVKNYIDLNTESWSSIGG 255
G GNN ++ S F + D G G D ++D + I +S+
Sbjct: 1381 TGDAGNN----DINPGLSNFGTDVVDGGSGSDRLIIDYSRNDFGTGVI----GGFSNFAN 1432
Query: 256 YEKNMTIAQHTV-----------IE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + T IE V G+S D + G + ++V +GND+ G
Sbjct: 1433 PTNSFSRGSGTNPPVQDAVTFKNIERLKVTGTSKADQIFGGADDDVILGGAGNDIIAGGR 1492
Query: 303 GLDTFFYYAPSY 314
G + +
Sbjct: 1493 GNNVILADDGND 1504
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 36/223 (16%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDD----LLDLTLIGGVKNYIDLN-------TESWSS 252
+ + +E Y GGDD ++ G N + N + SS
Sbjct: 1102 DTLISLEGDDVLLSGAGADYIDGGDDEDTITYIASMAGVYVNISNSNVAFVSPIDKVLSS 1161
Query: 253 IGGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNS---------ANNVFFESSGNDVFDG 300
+ A I E++ GS ND+++ +++ G+D DG
Sbjct: 1162 LPKNRGFGGEANGDKIFNVENLQGSIYNDILVAGDQDGHVSGLNGDDILIAGPGDDTLDG 1221
Query: 301 SSGLDTFFYYAPSYLYKI--------YRFENAIIVYDANEHKQD---FLSDVERLRFADQ 349
+G D Y + ++ + + +K D ++ +E L+ ++
Sbjct: 1222 GTGNDWVSYIRATQGVEVHLVEEDGNTDGGASGDKLLSLRNKDDEPLSINSIENLQGSNF 1281
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
+IL + L G D + F + G
Sbjct: 1282 ADTLEGDIGSNILRGEGGSDTLKGNDGNDTLIGGVGADFLDGG 1324
>gi|329847990|ref|ZP_08263018.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843053|gb|EGF92622.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1860
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 69/224 (30%), Gaps = 33/224 (14%)
Query: 204 NNIYKIEVQQ-----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ +Y T+ GG D+LD + + ++L+ S
Sbjct: 1194 DTVYGGTGNDIITVADGDDGFDTVDGEGGIDMLDASALTYDLA-LNLDDGS-------TN 1245
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I E VV SGNDV+ G SA SGND D G DT + + +Y
Sbjct: 1246 VAAIFAG--FEGVVTGSGNDVITGGSAAEYIETGSGNDWLDAGEGADTLIGGSDNDVYVY 1303
Query: 319 YRFENAIIVYDANEHKQ------DFLSDVERLRFADQ----------CIDSVNVKQRSIL 362
+ + + + +++E + ++L
Sbjct: 1304 TSGDLLVELANGGNDGVYSAYNITLAANIENVVLTGALAVSATGNALNNSLTGNGSFNVL 1363
Query: 363 EYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
+ A + L +G D +S G D F S Y
Sbjct: 1364 DGGAGADTLTGGLGDDSYYVDSTGDNVVEANGAGSDSLFSSVTY 1407
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 82/249 (32%), Gaps = 38/249 (15%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-----------------KNYIDL 245
+ +Y + + + + G+D LDL++ G + +L
Sbjct: 821 DDTVYAGDPVFGVAAGV--LDGGDGNDWLDLSVNTGAISLNLATGVNSFAATTVTAFENL 878
Query: 246 NTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N+ S + IGG + N +A + ++V+ G+D V G N+ G++ G +G
Sbjct: 879 NSGSGNDSIGGTDGNNVLASNGGADTVLAGLGHDSVTGGDGNDWLDGGDGDNTIVGGTGN 938
Query: 305 DTFFYYAPSYLYKIYRFENA--------------IIVYDANEHKQDFLSDVERLRFADQC 350
DT Y + + +V A + + ++E L
Sbjct: 939 DTLVGTINGYNVVLDGGDGYDLVDVSPYNGDYIIDLVTGATGFGGEAIVNMEALVSGGGN 998
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + + ++ G D+ + EG D DS L DD
Sbjct: 999 DHITGNAAANQISVNGGNDTVLAGAGADLVTG-GDGIDQLFGEGDD---DSLFGLDGADD 1054
Query: 411 LRNVFGSDR 419
L G D
Sbjct: 1055 LYGGTGHDT 1063
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 70/224 (31%), Gaps = 19/224 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESW 250
A GN + + T+ G+D D + + +
Sbjct: 1514 ANISGTGN---GLHNVLIGNAGNNTLSGGDGNDTYYIQNAADQVSEASNAGFDTVISSVT 1570
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+ G + + + + G+ +V+ GNS +NV +G+D +G +G DT
Sbjct: 1571 YSLAGKQAEVLSLTGSANLNATGNGLLNVLNGNSGSNVLDAGAGHDSLNGGAGADTMIGG 1630
Query: 311 APSYLYKIYRFENAIIVYDAN-------EHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
+ Y + + I ++VE L ID + L
Sbjct: 1631 TGNDSYSVDDAGDIISELAGGGAELVYASVTYTLSAEVEALILTGLTTIDGTGNAGNNTL 1690
Query: 363 EYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
++ L G D ++ +G D+ + + Y
Sbjct: 1691 TGNSAKNVLAGGAGNDTYYIQTTTDNVVELSGQGTDLIYSTVTY 1734
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 17/164 (10%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T G N + N ++ S I + ++ T T +S+ G D +IG N+
Sbjct: 44 TASGTFANALLYNGDTGSLIENFNRDDTFTGGTGDDSLTSGGGWDTLIGGDGNDTLSGGD 103
Query: 294 GNDVFDGSSGLDTFF--------YYAPSYLYKIYRFENAIIVYDANEHKQDFLS------ 339
GND G +G D N + + + D +S
Sbjct: 104 GNDELFGGNGNDRLVDDAGGAGMTGGAGNDTYWVFSGNIVTITENAAEGTDEVSVDYNYA 163
Query: 340 ---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+VE LR + + ++ L + G D F
Sbjct: 164 LPDNVEILRMSGNAYNGYGNASDNVFFGGNRDNHLYGMAGNDAF 207
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 5/157 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + +IG V ++ + + + N+T+ IE++ +GN GNS
Sbjct: 704 GSDTYVVDVIGEV-----VSEAADAGVDEVFANVTVFLGGNIENLTLVAGNLGGFGNSLA 758
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N S+GND DG G DT + ++A+ + N+ L +
Sbjct: 759 NRLTGSTGNDYLDGQDGNDTAYGLGGQDTLTGGVGDDALDGGEGNDQLTGGLGSNQVYGG 818
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D + V
Sbjct: 819 LGDDTVYAGDPVFGVAAGVLDGGDGNDWLDLSVNTGA 855
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 57/190 (30%), Gaps = 43/190 (22%)
Query: 194 IYGAPKGSLGNNIYKIEVQ-----QKDSPFIQTIYDSGGDDLLDLTL--IGGVKNYIDLN 246
+YG + IY T+ G D+L+ + G N +D +
Sbjct: 1055 LYGGTGH---DTIYGGSGDDTVTVNDGDDGYDTVDGEDGIDMLEASGLTYGLTLNMVDGS 1111
Query: 247 T------ESWSSIGGYEKNMT---------IAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
T + + N IA + ++V G G D+V G ++ F
Sbjct: 1112 TNVAAVFAGFEVVITGSGNDAVTGTAAADQIAVNAGNDTVNGGDGADLVTGGDGVDLLFG 1171
Query: 292 ------------------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+D G +G D + E I + DA+
Sbjct: 1172 EGADDSLLGDGGDDDLSGGAGHDTVYGGTGNDIITVADGDDGFDTVDGEGGIDMLDASAL 1231
Query: 334 KQDFLSDVER 343
D +++
Sbjct: 1232 TYDLALNLDD 1241
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 47/148 (31%), Gaps = 15/148 (10%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-SGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+S + GNS NN GND DG G DT + Y I + +
Sbjct: 1426 NATGNSLAQSLTGNSGNNSLTALGGNDRLDGGSGGADTLIGGSGDDTYVITTAGD--TIT 1483
Query: 329 DANEHKQDFL---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D + ++VERL I ++L A L G D
Sbjct: 1484 EVLGEGSDLVESAITYTLGAEVERLTLTGSANISGTGNGLHNVLIGNAGNNTLSGGDGND 1543
Query: 379 V--FESMKHFYEFGLSEGRDITFDSYLY 404
++ + G D S Y
Sbjct: 1544 TYYIQNAADQVSEASNAGFDTVISSVTY 1571
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 28/73 (38%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G I + S G+S + + GN N G DV G G D F + A
Sbjct: 1735 SLNGRYAETLILTGSANVSATGNSLGNTLTGNDGINTINGKGGKDVLAGGLGADIFLFEA 1794
Query: 312 PSYLYKIYRFENA 324
S L I F +
Sbjct: 1795 ASGLDTITDFNAS 1807
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI-------ESVVGSSGNDVV 280
+D + G I N + + N + + I + G++ ++V
Sbjct: 132 NDTY--WVFSGNIVTITENAAEGTDEVSVDYNYALPDNVEILRMSGNAYNGYGNASDNVF 189
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + +N + +GND F G G DT + Y I R + +IV D N D ++
Sbjct: 190 FGGNRDNHLYGMAGNDAFFGVEGADTLDGGTGNDSYTI-RNDGDVIVEDVNA-GTDLVTT 247
Query: 341 VERLRFA 347
+ +
Sbjct: 248 IGSFDYT 254
Score = 44.7 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 31/122 (25%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ S+ G N + + + +D G + ++ G D G G DT
Sbjct: 40 AAVSTASGTFANALLYNGDTGSLIENFNRDDTFTGGTGDDSLTSGGGWDTLIGGDGNDTL 99
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + ++ + F+ + E +
Sbjct: 100 SGGDGNDELFGGNGNDRLVDDAGGAGMTGGAGNDTYWVFSGNIVTITENAAEGTDEVSVD 159
Query: 368 YE 369
Y
Sbjct: 160 YN 161
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 6/140 (4%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q + G + + + S T+ GDD +T G + S
Sbjct: 1434 QSLTGNSGNNSLTALGGNDRLDGGSGGADTLIGGSGDDTYVITTAGDTITEVL---GEGS 1490
Query: 252 SIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ E +T +E + S N GN +NV ++GN+ G G DT++
Sbjct: 1491 DL--VESAITYTLGAEVERLTLTGSANISGTGNGLHNVLIGNAGNNTLSGGDGNDTYYIQ 1548
Query: 311 APSYLYKIYRFENAIIVYDA 330
+ V +
Sbjct: 1549 NAADQVSEASNAGFDTVISS 1568
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 75/254 (29%), Gaps = 33/254 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD-------LLDLTLIGGVKNYIDLNTE 248
G+ + + + + T+ G+D + ++ G T
Sbjct: 281 GSNLDNFLGGLGGNDRLDGGAGGNDTLSGGQGNDSYYVNHLTVSVSESSGAGTDEVFATL 340
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S S + +N+T+ + + G+S ++ +IG+ +N + G D G G D +
Sbjct: 341 SLS-LAAEVENLTLMAGDI--NGTGNSLSNRIIGSEGHNALDGAGGTDTLTGEGGND-TY 396
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL------ 362
Y + + V + ++E L + + +
Sbjct: 397 YVDSATDTIFEDSGDGTDVVFSTAGSYVLNFNIEMLYLLGAAVTGTGNNGDNAVIGNDLN 456
Query: 363 ------------EYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY--LG 406
+ L G D + G D+ + S Y L
Sbjct: 457 NGLNGGGGHDLLSGGLGSDTLTGGTGNDTYYVDQAGDSLVEAAGGGADLVYASLTYTLLA 516
Query: 407 SYDDLRNVFGSDRG 420
++++L+ D
Sbjct: 517 NFEELQLTASGDGT 530
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 33/102 (32%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN+ NN +S +V G +G DT++ + + ++Y + +
Sbjct: 1682 TGNAGNNTLTGNSAKNVLAGGAGNDTYYIQTTTDNVVELSGQGTDLIYSTVTYSLNGRYA 1741
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + + L + G+DV
Sbjct: 1742 ETLILTGSANVSATGNSLGNTLTGNDGINTINGKGGKDVLAG 1783
>gi|294010688|ref|YP_003544148.1| large repetitive protein [Sphingobium japonicum UT26S]
gi|292674018|dbj|BAI95536.1| large repetitive protein [Sphingobium japonicum UT26S]
Length = 2259
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 9/163 (5%)
Query: 231 LDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
L + G + L S SS + G TI E + G G D + GN N++
Sbjct: 2063 LTASSATGTLANLSLLNASGSSAVLEGNASANTINGTAANERLYGHGGADTLNGNGGNDL 2122
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-----NEHKQDFLSDVER 343
+G D +G +G D + A + +++ N + + ++ER
Sbjct: 2123 LRGGAGADTLNGGTGNDVLVHDAADASIDGGTGVDTLLIDSGTGMVLNLDAVNNIRNIER 2182
Query: 344 LRF--ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D + I AS++ ++ D
Sbjct: 2183 IDLGVGDAGRQITLTEAGIIRATEASHQLIVTGDLNDSVTMTG 2225
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 22/143 (15%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G ++LD T I D+N + SS G N+++ + GSS V+ GN++
Sbjct: 2046 GLNVLDTTTITAT----DMNGLTASSATGTLANLSLL------NASGSSA--VLEGNASA 2093
Query: 287 NV---------FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N + G D +G+ G D A + N ++V+DA + D
Sbjct: 2094 NTINGTAANERLYGHGGADTLNGNGGNDLLRGGAGADTLN-GGTGNDVLVHDAADASIDG 2152
Query: 338 LSDVERLRFADQCIDSVNVKQRS 360
+ V+ L +N+ +
Sbjct: 2153 GTGVDTLLIDSGTGMVLNLDAVN 2175
>gi|224146279|ref|XP_002325947.1| predicted protein [Populus trichocarpa]
gi|222862822|gb|EEF00329.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 13/96 (13%)
Query: 58 ALGEWSKVVDLTFEETSIHSD----IKFISSNNG----YVCTPRYDSRYFME----INFD 105
A W+KV TF E + + I+F S ++G + + F +++D
Sbjct: 181 AFQTWAKVSKFTFREATGGASADIVIEFFSGDHGDQSPFDGPGNQLAHAFYPQDGRLHYD 240
Query: 106 KADVWRYGIGKGTILSHNA-LHEIGHALGLMHPGSY 140
+ W I +HEIGH LGL H +
Sbjct: 241 ADENWSTDPAMDQIDLETVTVHEIGHLLGLYHSKDH 276
>gi|254411801|ref|ZP_05025577.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196181523|gb|EDX76511.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 2367
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 60/168 (35%), Gaps = 15/168 (8%)
Query: 225 SGGDDLL-----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGND 278
+GGDD+ D +GG N DL E + + G + N T+ T + +VG +G+D
Sbjct: 508 NGGDDVFYGGAGDDQALGGNDND-DLRGEDGNDKLNGEDGNDTLYGGTGEDQLVGGNGDD 566
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-----NEH 333
+ G N+ GND G +G D + + + +
Sbjct: 567 YLHGEDGNDKLSGEDGNDSLYGGTGEDQLLGGNGDDDLRGEDGNDKLSGDNGHDSLYGGA 626
Query: 334 KQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+D L S + LR D L + L+ G+D
Sbjct: 627 GEDSLFGGSGNDDLRGEDGNDYLKGEDGNDTLYGGNHNDTLLAGTGED 674
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 60/195 (30%), Gaps = 14/195 (7%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWS 251
+ +Y + + GGDD L+ G L+ +
Sbjct: 1825 NGDDGNDTLYGRAGLDTLTGGVGNDALWGGDDADMLSGDAGTDVLQGGDGNDQLSGGEGN 1884
Query: 252 S-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T+ +T + + G +G+D ++GN + + GND DG G D
Sbjct: 1885 DRLYGNADNDTLEGNTGNDLLNGGAGDDHLLGNDGFDRLYGKKGNDWLDGGDGSDQLRGE 1944
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTAS 367
A F A Y D L +RL +L+ +
Sbjct: 1945 AGDDTL----FGQAGTDYLDGGSGDDQLYGGTGRDRLYGRQGEDVLDGGADHDLLQGGSG 2000
Query: 368 YEDLIQVIGQDVFES 382
+ L G D+
Sbjct: 2001 DDQLYGQTGNDILNG 2015
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 56/176 (31%), Gaps = 5/176 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
Q T+Y G D L GGV N + + G + +
Sbjct: 1821 SDQLNGDDGNDTLYGRAGLDTL----TGGVGNDALWGGDDADMLSGDAGTDVLQGGDGND 1876
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND + GN+ N+ ++GND+ +G +G D + + + D
Sbjct: 1877 QLSGGEGNDRLYGNADNDTLEGNTGNDLLNGGAGDDHLLGNDGFDRLYGKKGNDWLDGGD 1936
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ + D A + T + L G+DV +
Sbjct: 1937 GSDQLRGEAGDDTLFGQAGTDYLDGGSGDDQLYGGTGR-DRLYGRQGEDVLDGGAD 1991
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 7/165 (4%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+Y G+D LD G + L + + G + + T +++ G +GND +
Sbjct: 1392 LYGHQGEDTLD-----GGQGDDHLEAGDGNDQLYGQTGDDLLDAGTGNDNLFGGTGNDQL 1446
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G ++ +G+D + +G D+ + + + + D ++ +
Sbjct: 1447 FGRLGDDFLDAGAGDDHLEAGAGDDSLYGQGGNDFLNGGDGHDRLEGGDGDDELIAE-AG 1505
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ L L A + L G D
Sbjct: 1506 IDYLDGGSGDDSLSGGDDHDQLLGQAGNDTLDGGSGDDNLIGGDD 1550
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 1/128 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N ++ T + ++G +G+D + G N+ +G+D G +G D+ F +
Sbjct: 577 LSGEDGNDSLYGGTGEDQLLGGNGDDDLRGEDGNDKLSGDNGHDSLYGGAGEDSLFGGSG 636
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + + D N+ + + L IL + L
Sbjct: 637 NDDLRGEDGNDYLKGEDGNDTLYGGNHN-DTLLAGTGEDLLHGEDGDDILHGEQGNDTLY 695
Query: 373 QVIGQDVF 380
QD
Sbjct: 696 GGNDQDQL 703
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 59/182 (32%), Gaps = 14/182 (7%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTI 262
+ IY D I GDD + GG +++ ++ I G + N T+
Sbjct: 1138 DTIYGDLQGVTDQGDADYIRGGDGDDTI---HAGGGDDWVKGDSGYGDDLIYGDDGNDTL 1194
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G G+D + G+ + + +G+D G +G D A + Y
Sbjct: 1195 EGGAGEDFISGGIGSDRIFGDDEADQLYGDAGDDHIVGGTGDDQLDGGADND----YLEA 1250
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N + DFLS D LE A + L G D E
Sbjct: 1251 NEGNDRLLGQAGDDFLSG------GDGEDSLWGGDDNDWLEGEAGDDYLAGEAGDDHLEG 1304
Query: 383 MK 384
Sbjct: 1305 AD 1306
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 45/149 (30%), Gaps = 1/149 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++GG I + + G + + +G + ND + G N+
Sbjct: 484 DDIMVGGDYQDIFKGQDGNDNFKGNGGDDVFYGGAGDDQALGGNDNDDLRGEDGNDKLNG 543
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND G +G D + + D N+ + ++L +
Sbjct: 544 EDGNDTLYGGTGEDQLVGGNGDDYLHGEDGNDKLSGEDGNDSLYGG-TGEDQLLGGNGDD 602
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L ++ L G+D
Sbjct: 603 DLRGEDGNDKLSGDNGHDSLYGGAGEDSL 631
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 2/129 (1%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + Y GGD DLT G ++ G + N +
Sbjct: 1759 DQLYGQQGNDTLEGGTGDDYLEGGDGEDDLTGGTGNDRLYGKRDRD--TLNGGDGNDLLD 1816
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G GND + G + + GND G D A + + + +
Sbjct: 1817 GGDSSDQLNGDDGNDTLYGRAGLDTLTGGVGNDALWGGDDADMLSGDAGTDVLQGGDGND 1876
Query: 324 AIIVYDANE 332
+ + N+
Sbjct: 1877 QLSGGEGND 1885
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 12/175 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + + Y GG D + L+GG N + E + +
Sbjct: 2128 DQLYGQDGDDILNGGTDDDYLDGGAD--NDQLLGGKGNDQLYGQAGDDLLDSGEGDDYLE 2185
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + ++G G+D + G N +G+D +G G+DT F + Y
Sbjct: 2186 GGSGDDHLLGGKGDDQLYGQQGTNYLDGGAGHDYIEGGDGIDTLFGQSGDD----YLIGG 2241
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D+L IL+ A + L G D
Sbjct: 2242 DGDDILDGGSGYDWLEG------GAGNDQLYAGSGDDILDGGAGNDQLYGGNGMD 2290
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 66/196 (33%), Gaps = 18/196 (9%)
Query: 223 YDSG-GDDLLDLTLIGGVKNYIDLNTE----SWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+D G G D L G ++L T W + + IE+V+GS +
Sbjct: 1025 FDGGNGTDTLSFRRDPGGVQ-VNLETGRVMDGWGDMDIIIPRPDNNSLSTIENVIGSRHD 1083
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFENAIIVYDA 330
D +IG++ N G+D DG +G D+ + +I+ + +Y
Sbjct: 1084 DQIIGDNQANWITADKGDDTLDGQAGDDSLYGERGDDQIIGGLGQDRIFGNQGTDTIYGD 1143
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED--LIQVIGQDVFESMK--HF 386
+ D D + +R D ++ + Y D + G D E F
Sbjct: 1144 LQGVTD-QGDADYIRGGDGDDTIHAGGGDDWVKGDSGYGDDLIYGDDGNDTLEGGAGEDF 1202
Query: 387 YEFGLSEGRDITFDSY 402
G+ R D
Sbjct: 1203 ISGGIGSDRIFGDDEA 1218
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 57/216 (26%), Gaps = 21/216 (9%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G + I+ + Y GG D L+ G + S+ G
Sbjct: 2050 NGGGDNDQIFGQSGIDILNGGSGHDYLEGGLDNDQLSGDRGNDQLY--GQQGDDSLEGNA 2107
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG---------SSGLDTFF 308
N + +++ G GND + G +++ + +D DG G D +
Sbjct: 2108 GNDYLEGGVGNDTLAGDRGNDQLYGQDGDDILNGGTDDDYLDGGADNDQLLGGKGNDQLY 2167
Query: 309 YYAPSYLYKI-----YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
A L Y + + D L + + D ++ ++
Sbjct: 2168 GQAGDDLLDSGEGDDYLEGGSGDDHLLGGKGDDQLYGQQGTNYLDGGAGHDYIEGGDGID 2227
Query: 364 YTA-----SYEDLIQVIGQDVFESMKHFYEFGLSEG 394
Y S + E G
Sbjct: 2228 TLFGQSGDDYLIGGDGDDILDGGSGYDWLEGGAGND 2263
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 12/167 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+GGDD L G L+ + + E I + + +GND + G
Sbjct: 1681 AGGDDNDRLYGRQGNDT---LDGGAGVDYLNAGEGEDQILGGAGNDQLYADAGNDTLAGG 1737
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-----KQDFL 338
+ N+ +G D+ G G D + + + ++ + D + D L
Sbjct: 1738 ADNDYLDGGAGEDLLSGDDGNDQLYGQQGNDTLEGGTGDDYLEGGDGEDDLTGGTGNDRL 1797
Query: 339 ---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + L D L + L G D
Sbjct: 1798 YGKRDRDTLNGGDGNDLLDGGDSSDQLNGDDGNDTLYGRAGLDTLTG 1844
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 71/228 (31%), Gaps = 22/228 (9%)
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
Y G D Y ND + Y D+ S GY +YG
Sbjct: 731 YGNTGNDQLYGNDGYD-----YLEGGDNQDYLSGGYGF----------DTLYGQAGN--- 772
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTI 262
+ +Y GG L G N LN E+ + + G T+
Sbjct: 773 DQLYGNAGDDFLDGGSHADQLYGG--TGRDLLYGQSGNDF-LNGEADNDVLDGGSGVDTL 829
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T +++ G + +D + GN+ ++V GND +G+SG D A + +
Sbjct: 830 DGGTGEDTLYGQTDDDFLYGNAGHDVLEGGDGNDYLEGNSGDDILHGQANNDQLYGNQGN 889
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + ++ D D S ++ Y D
Sbjct: 890 DELYGETGDDFLMGEAGDDLIHGGQDNDTVSYETSPNGVIVNINEYRD 937
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 3/130 (2%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + I + +++ G+ NDV+ G ++ SG D DG G DT Y +
Sbjct: 385 DGTQNDDWIEGTSDDDTINGNERNDVLRGQGGDDTLVGGSGYDFLDGEEGEDTANYSSSP 444
Query: 314 YLYKIYRF---ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + + D L ++E + ++ V + I + ++
Sbjct: 445 NKINVRAEKVDDQDVYKVNDGFGTVDTLGNIEVISGSNHDDIMVGGDYQDIFKGQDGNDN 504
Query: 371 LIQVIGQDVF 380
G DVF
Sbjct: 505 FKGNGGDDVF 514
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 5/163 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I+ G+D LD GG + ++ + + G + + +S+ G D
Sbjct: 1336 DVIFGQTGEDTLD----GGQGEDVLISGDGDDLLMGQAGHDILDAGAGNDSLSGGDDTDF 1391
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G+ + G+D + G D + L + + N+ L
Sbjct: 1392 LYGHQGEDTLDGGQGDDHLEAGDGNDQLYGQTGDDLLDAGTGNDNLFGGTGNDQLFGRLG 1451
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + L L + L G D E
Sbjct: 1452 D-DFLDAGAGDDHLEAGAGDDSLYGQGGNDFLNGGDGHDRLEG 1493
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 39/131 (29%), Gaps = 10/131 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G G+DV+ G + + G DV G D A + +++ D
Sbjct: 1329 LIGGDGDDVIFGQTGEDTLDGGQGEDVLISGDGDDLLMGQAGHDILDAGAGNDSLSGGDD 1388
Query: 331 -----NEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+D L + L D +L+ ++L G D
Sbjct: 1389 TDFLYGHQGEDTLDGGQGDDHLEAGDGNDQLYGQTGDDLLDAGTGNDNLFGGTGNDQLFG 1448
Query: 383 M--KHFYEFGL 391
F + G
Sbjct: 1449 RLGDDFLDAGA 1459
Score = 44.7 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 34/77 (44%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS +D++IGN +N +G+D+ ++G D F + R + V
Sbjct: 986 LEHIIGSEFDDILIGNYKDNQIQALAGDDLILSTAGNDQFDGGNGTDTLSFRRDPGGVQV 1045
Query: 328 YDANEHKQDFLSDVERL 344
D D++ +
Sbjct: 1046 NLETGRVMDGWGDMDII 1062
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 63/203 (31%), Gaps = 22/203 (10%)
Query: 199 KGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTES 249
+G+ ++ + + T+ G D LD N I++ E
Sbjct: 394 EGTSDDDTINGNERNDVLRGQGGDDTLVGGSGYDFLDGEEGEDTANYSSSPNKINVRAEK 453
Query: 250 WSSIGGYEKNMTIAQHTV---IESVVGSSGNDVVIGNSANNVFFE--------S-SGNDV 297
Y+ N IE + GS+ +D+++G ++F G+DV
Sbjct: 454 VDDQDVYKVNDGFGTVDTLGNIEVISGSNHDDIMVGGDYQDIFKGQDGNDNFKGNGGDDV 513
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
F G +G D + + + + D N+ + ++L +
Sbjct: 514 FYGGAGDDQALGGNDNDDLRGEDGNDKLNGEDGNDTLYGG-TGEDQLVGGNGDDYLHGED 572
Query: 358 QRSILEYTASYEDLIQVIGQDVF 380
L + L G+D
Sbjct: 573 GNDKLSGEDGNDSLYGGTGEDQL 595
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 50/171 (29%), Gaps = 6/171 (3%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDL 245
+YG + + + + +Y GDDLLD L GG N
Sbjct: 1389 TDFLYGHQGEDTLDG-GQGDDHLEAGDGNDQLYGQTGDDLLDAGTGNDNLFGGTGNDQLF 1447
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + + +S+ G GND + G ++ G+D +G+D
Sbjct: 1448 GRLGDDFLDAGAGDDHLEAGAGDDSLYGQGGNDFLNGGDGHDRLEGGDGDDELIAEAGID 1507
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + ++ N+ D + DQ
Sbjct: 1508 YLDGGSGDDSLSGGDDHDQLLGQAGNDTLDGGSGDDNLIGGDDQDQLLGQA 1558
Score = 40.5 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 64/257 (24%), Gaps = 61/257 (23%)
Query: 189 VAVQKIYGA---PKGSLGNNIYKIEVQQKDSPFI-----------------------QTI 222
+YG + G+ ++E D I +
Sbjct: 1468 AGDDSLYGQGGNDFLNGGDGHDRLEGGDGDDELIAEAGIDYLDGGSGDDSLSGGDDHDQL 1527
Query: 223 YDSGGDDLL-----DLTLIGGVKNYIDLNTE------------------SWSSIGGYEKN 259
G+D L D LIGG L + G N
Sbjct: 1528 LGQAGNDTLDGGSGDDNLIGGDDQDQLLGQAGNDDLDGGSGDDLLLGGDGNDDLYGQSGN 1587
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ + + G G+D +IG + ++ GND+ G D + A
Sbjct: 1588 DTLDGGAGQDKLYGDDGDDELIGQAGDDYLEAGDGNDLLSGGENNDKLYGEAGDDTL--- 1644
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D LS + D + + L + L G D
Sbjct: 1645 -NGGSGDDRLEAGEGDDQLSGDAGFDYLDGGLGNDQ------LAGGDDNDRLYGRQGNDT 1697
Query: 380 FESMK--HFYEFGLSEG 394
+ + G E
Sbjct: 1698 LDGGAGVDYLNAGEGED 1714
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I I+++ G SG+D +IG +++ SG D +G +G D + +
Sbjct: 2211 LDGGAGHDYIEGGDGIDTLFGQSGDDYLIGGDGDDILDGGSGYDWLEGGAGNDQLYAGSG 2270
Query: 313 SYL-------YKIYRFENAIIVYDANEHKQDFLSDV 341
+ ++Y + D + +
Sbjct: 2271 DDILDGGAGNDQLYGGNGMDTFILGSGAGADTIFNF 2306
>gi|157130897|ref|XP_001662052.1| matrix metalloproteinase [Aedes aegypti]
gi|108881894|gb|EAT46119.1| matrix metalloproteinase [Aedes aegypti]
Length = 481
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 62/190 (32%), Gaps = 49/190 (25%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSD 78
D W I Y+ + S + + + + A EWSKV +L F ETS +D
Sbjct: 138 DAKWDKRLISYRIRDYPSGASSSFV-------RTMMKRAFDEWSKVTNLDFFETSDRGAD 190
Query: 79 IKFISSNNG---------YVCTPRYDSRYFM---EINFDKADVWRYGIGKGTILSHNALH 126
I+ + YF +++F+ + A+H
Sbjct: 191 IEVNFGGTSHSRRNRRCSFDSPTIMAHAYFPEDGDLHFNSR-YFFDNPEHREDFLDTAMH 249
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H + G +N Y P
Sbjct: 250 EIGHSLGLEHS-NTKGALMHPTDNNRYTE---------------------------PQPE 281
Query: 187 DIVAVQKIYG 196
D+ +QK+YG
Sbjct: 282 DVRRIQKLYG 291
>gi|73998988|ref|XP_854180.1| PREDICTED: similar to matrix metalloproteinase 21 preproprotein
[Canis familiaris]
Length = 552
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 60/163 (36%), Gaps = 40/163 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEE--TSIHS--DIKFISSNNGYVCTPRYDSRY------ 98
+ + R A WS+V+ L F E + + DIK ++ PR
Sbjct: 175 AEQRRILRLAFRMWSEVMPLHFREDLAAPGAAVDIKLAFGRGRHLGCPRVFDGSGQEFAH 234
Query: 99 ---FMEINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
+I+FD + + G L A+HEIGH LGL P +Y G
Sbjct: 235 AWRLGDIHFDDDEHFTPPTSDSGISLLKVAVHEIGHVLGL--PHTYRAG----------- 281
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S+M P + F SD A+QK+YG+
Sbjct: 282 ------SIM---QPNYVPQEPVFE----LDWSDRKAIQKLYGS 311
>gi|307825609|ref|ZP_07655827.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
gi|307733495|gb|EFO04354.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
Length = 700
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 13/161 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEK------NMTIAQHTVIESVVGSSGNDVVIGNSA 285
D TL N +DL T +S+ + + + G SG D + G
Sbjct: 198 DATLQFANGNQLDLETLVGTSLTTALNLQLDNSGGKLYGGAGNDRLYGGSGGDRLSGAWG 257
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++ +GND G + D A + +Y++ A ++ D Q+ + +
Sbjct: 258 DDTLSGGAGNDTLIGGADRDLLLGGAGNDIYELSATSGADLITD--TEGQNIIRFAADIS 315
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
A+ + + + + L + V + + H+
Sbjct: 316 AANLTVSTTTMAGQPALR-----MKVNGVEDATITSGVDHY 351
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + TI + + G GND +IG + N+ +G D+ G +G DT Y A
Sbjct: 78 DLDGTSGDDTITGTNTTDRINGLGGNDTLIGGAGNDSLDGGAGADILMGGAGDDT--YLA 135
Query: 312 PSYLYKIYRFENAIIVYDANEHK 334
+ + E I+ A +
Sbjct: 136 VTGEDTLIDTEGHNILQLAQANG 158
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 39/104 (37%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D+ V ++ + S + + + +++ G++ D + G N
Sbjct: 44 GFDPNDVFNSSSVSTFVFADGTELSINQLLARGFDLDGTSGDDTITGTNTTDRINGLGGN 103
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ +GND DG +G D A Y E+ +I +
Sbjct: 104 DTLIGGAGNDSLDGGAGADILMGGAGDDTYLAVTGEDTLIDTEG 147
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+GND + G ++ +G+D G+ G D + Y++ R A V++
Sbjct: 520 GSAGNDPLSGTDYRDIILAGAGDDQLIGNGGNDDLHGETGTDTYRLSRGGGADQVFEVEG 579
Query: 333 H 333
Sbjct: 580 E 580
>gi|301778036|ref|XP_002924430.1| PREDICTED: matrix metalloproteinase-23-like [Ailuropoda
melanoleuca]
Length = 393
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 32/142 (22%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDI 79
W ++ + Y+ + LS + + +A A WS V +F E + SD+
Sbjct: 90 RWDHFNLTYRILSFPRNLLSP-----SETRRGLA-TAFRMWSDVSPFSFREVAPEQPSDL 143
Query: 80 KFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG------ 117
+ + T +F I+FD ++ W G +
Sbjct: 144 RIGFYPVNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWILGPTRYSWKKGV 203
Query: 118 --TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 204 WLTDLVHVAAHEIGHALGLMHS 225
>gi|262275861|ref|ZP_06053670.1| glycosyltransferase involved in cell wall biogenesis [Grimontia
hollisae CIP 101886]
gi|262219669|gb|EEY70985.1| glycosyltransferase involved in cell wall biogenesis [Grimontia
hollisae CIP 101886]
Length = 1150
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 30/163 (18%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y+ ++ + DR ++ YI +G+ P+ F + Y +
Sbjct: 40 FDLEYYVKNHTE------KDRCSSLLRYILIEESKGKKPNPLFNPIWYKKKY-------- 85
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ F YL D+RN G D HYI +G
Sbjct: 86 -NIGSNECALSHYLVNKESGNLSANPLFYESWYLKQNSDVRNS-GMD---PFIHYIKYGE 140
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
E R P+ F Y +++D+ + +H+
Sbjct: 141 NENRKPNPYFCPKFYRENYKDVEKSGL-------MMLEHYIEH 176
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 12/79 (15%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLIN 454
+ F YL D+RN HYI +G E R P+ + Y +++D+
Sbjct: 109 NPLFYESWYLKQNSDVRN----SGMDPFIHYIKYGENENRKPNPYFCPKFYRENYKDVEK 164
Query: 455 AFADAPDLVQVGKDHFSNF 473
+ + +H+
Sbjct: 165 SGL-------MMLEHYIEH 176
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 6/94 (6%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
+ L Y + Y + + H+ ++G +E R F Y +Y D+
Sbjct: 107 SANPLFYESWYLKQNSDVRNSGMDPFIHYIKYGENENRKPNPYFCPKFYRENYKDVEK-- 164
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
HYI H + F + +
Sbjct: 165 --SGLMMLEHYIEHAKFNHQPNPLFNNSWFKMHN 196
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 24/168 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y+ ++ + DR ++ YI +G+ P+ F + Y +
Sbjct: 40 FDLEYYVKNHTE------KDRCSSLLRYILIEESKGKKPNPLFNPIWYKKKY-------- 85
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
+ H+ +E +++ NP Y + Y + + HYI +G E
Sbjct: 86 -NIGSNECALSHYLV--NKESGNLSANPLFYESWYLKQNSDVRNSGMDPFIHYIKYGENE 142
Query: 602 GRALG--ISGMQFKSVMNLSEKSR----DKADLSLSFDHKKVDLYTDY 643
R ++ EKS + F+H+ L+ +
Sbjct: 143 NRKPNPYFCPKFYRENYKDVEKSGLMMLEHYIEHAKFNHQPNPLFNNS 190
>gi|329848568|ref|ZP_08263596.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843631|gb|EGF93200.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 977
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 52/165 (31%), Gaps = 14/165 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N + + G G+D ++G S+ + G+D DG +G DT A
Sbjct: 446 SLWGRGYNDYFQGGAGTDDLAGYGGDDSLMGGSSVDFLEGGDGHDYLDGGTGSDTMVGGA 505
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLRFAD-QCIDSVNVKQRSI 361
Y + N +V D N D + + +E L +
Sbjct: 506 GDDTYVVDA--NGDVVNDQNGGGTDTIMTGLTWTLGTYIENLTLTGSANSKGTGNDLANS 563
Query: 362 LEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
L L +G D ++ G D+ + Y
Sbjct: 564 LTGNDGNNTLTGGLGDDSYFIQNTGDNVVEANGGGTDVIYSQVNY 608
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 11/143 (7%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ N+ + GN NNV S G D G G DT+ + V+ +
Sbjct: 709 GNASNNAITGNDGNNVLDGSGGVDTLVGGLGNDTYHIDNSLDIVTEASGAGTDTVFASAS 768
Query: 333 HKQD-------FLSDVERLRFADQCIDSVNVKQR--SILEYTASYEDLIQVIGQDV--FE 381
+ L+ + L + + ++L+ + + L +G D +
Sbjct: 769 YNLSGRVVENLTLTGADDLTAIGNGVGNKLTGNTGNNLLDGGSGADTLTGGLGNDTYYVQ 828
Query: 382 SMKHFYEFGLSEGRDITFDSYLY 404
++ EG D+ + S Y
Sbjct: 829 TIGDKVVEAGGEGTDLIYASVTY 851
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y + + ++GG+ DL N T +
Sbjct: 817 TGGLGNDTYYV------QTIGDKVVEAGGEGT-DLIYASVTYNL----TGRYVETLNLTG 865
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I +G+S + +IGN+ N GND+ G G D F + S +
Sbjct: 866 SANI-------DALGNSLANTLIGNAGANTLNGLGGNDILTGGLGADIFLFQLGSRSDTV 918
Query: 319 YRFENA 324
F A
Sbjct: 919 TDFSAA 924
>gi|60677707|gb|AAX33360.1| SD03462p [Drosophila melanogaster]
Length = 758
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 52 QEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDS-------------R 97
+ + + AL W+ LTF E S +DI+ + + + ++D
Sbjct: 165 ERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAFYPGEG 224
Query: 98 YFMEINFDKADVWRYGIGK----GTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDND 152
+ +FD + W + GT + ALHE+GH+LGL H + +P Y +
Sbjct: 225 RGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGLAHSAIPDAVMFPWYQNNEV 284
Query: 153 YEN 155
N
Sbjct: 285 AGN 287
>gi|307257044|ref|ZP_07538819.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306864415|gb|EFM96323.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
Length = 1671
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 87/242 (35%), Gaps = 39/242 (16%)
Query: 142 GGYPVYGVDNDYENDSFLTS-------VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
GG + Y D++L S + Y +S D T +DI
Sbjct: 1111 GGEGNDTLKGSYGADTYLFSKGHGQDVIYEYSDSANSKSDID-----TLKFTDIN----- 1160
Query: 195 YGAPKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--DLNTESWS 251
Y K G+++ DS +++ Y+ + + I D +
Sbjct: 1161 YAEVKFRRVGDDLMLFGYHDTDSVTVKSFYN---HEYYQFEKLEFADRSITRDELGKQGM 1217
Query: 252 SIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G + + I +++VI+ +GND + G+ ++ +GND+ GS G DT+
Sbjct: 1218 ALFGTDGDDDINDWGRNSVID---AGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYL 1274
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ IY + ++ + D++ L+F D V ++ Y
Sbjct: 1275 FSKGHGQDVIYEYSDSA----------NSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGY 1324
Query: 369 ED 370
D
Sbjct: 1325 HD 1326
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 253 IGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + + I +++VI+ +GND + G ++ GND+ GS G DT+ +
Sbjct: 1494 LFGTDGDDDINDWGRNSVID---AGAGNDTINGGYGDDTLIGGKGNDILKGSYGADTYLF 1550
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
IY + ++ SD++ L+F D + +
Sbjct: 1551 SKGHGQDVIYEYSDSAS----------SKSDIDTLKFTDIGLSEL 1585
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 9/137 (6%)
Query: 242 YID-LNTESWSSIGGYEKNMTIA----QHTVI---ESVVGSSGNDVVIGNSANNVFFESS 293
YID + + N+TIA + + G N++++G+ +N S+
Sbjct: 1045 YIDYAKAQGFYENWAATSNLTIARLREAGVIFAESTDLKGDEKNNILLGSQKDNNLSGSA 1104
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G D+ G G DT + Y + ++Y+ ++ SD++ L+F D
Sbjct: 1105 GGDLLIGGEGNDTLKGSYGADTYLFSKGHGQDVIYEYSDSAN-SKSDIDTLKFTDINYAE 1163
Query: 354 VNVKQRSILEYTASYED 370
V ++ Y D
Sbjct: 1164 VKFRRVGDDLMLFGYHD 1180
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 261 TIAQHTVIE---SVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+I++ +I+ + G+ GND + + +++ GND+ GS G DT+ +
Sbjct: 1352 SISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGSYGADTYIFSKGHGQD 1411
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
IY + ++ + D++ L+F D V ++ Y D
Sbjct: 1412 VIYEYSDSA----------NSKRDIDTLKFTDVNYAEVKFRRVDDDLMLFGYHD 1455
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 15/81 (18%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
++ + GDD ++ G + ID N TI ++++G GND++
Sbjct: 1493 ALFGTDGDDDINDW---GRNSVID----------AGAGNDTINGGYGDDTLIGGKGNDIL 1539
Query: 281 IGNSANNV--FFESSGNDVFD 299
G+ + F + G DV
Sbjct: 1540 KGSYGADTYLFSKGHGQDVIY 1560
>gi|254422617|ref|ZP_05036335.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196190106|gb|EDX85070.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 691
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 3/126 (2%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D LIGG N + + ++ G + + ++++G GND + G
Sbjct: 546 GGNDA--DILIGGDGNDSLFGEQGFDTLYGGNGDDLLLGGNGKDTLIGGDGNDTLEGEIG 603
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERL 344
+ GND+ G G DTF I F + A LS V +
Sbjct: 604 KDTLIGGEGNDLLTGGQGRDTFVLVLGEGTDTITDFSGQDRIGLAGGLGIGDLSFVGNDI 663
Query: 345 RFADQC 350
F D
Sbjct: 664 LFTDTN 669
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 12/186 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKN 259
+ + F + +D L+ +G G + I ++SS ++
Sbjct: 437 TTLDLNSLDGSNGFAFSGFDKYAGFGRSLSGVGDVNGDGFDDLIIGRPNTYSSGVSSGQS 496
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ E+++G+ GN+V++G N++ +GNDV DG G D + + +
Sbjct: 497 YVVFGAASSETLIGTDGNNVLVGGKGNDLLDGKAGNDVLDGDEGDDNLYGGNDADILIGG 556
Query: 320 RFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+++ E D L + L + + LE + LI G
Sbjct: 557 DGNDSL----FGEQGFDTLYGGNGDDLLLGGNGKDTLIGGDGNDTLEGEIGKDTLIGGEG 612
Query: 377 QDVFES 382
D+
Sbjct: 613 NDLLTG 618
Score = 44.7 bits (104), Expect = 0.056, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 60/195 (30%), Gaps = 25/195 (12%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV----------- 272
D+G LDL + G + + ++ G + + ++
Sbjct: 432 DAGFATTLDLNSLDGSNGFAFSGFDKYAGFGRSLSGVGDVNGDGFDDLIIGRPNTYSSGV 491
Query: 273 ---------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G++ ++ +IG NNV GND+ DG +G D +
Sbjct: 492 SSGQSYVVFGAASSETLIGTDGNNVLVGGKGNDLLDGKAGNDVLDGDEGDDNLYGGNDAD 551
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFE 381
+I D N+ + L + + + L + L IG+D +
Sbjct: 552 ILIGGDGNDSLFGE-QGFDTLYGGNGDDLLLGGNGKDTLIGGDGNDTLEGEIGKDTLIGG 610
Query: 382 SMKHFYEFGLSEGRD 396
G GRD
Sbjct: 611 EGNDLLTGGQ--GRD 623
>gi|323960865|gb|EGB56485.1| hypothetical protein ERGG_02645 [Escherichia coli H489]
Length = 337
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 12/84 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
F Y +Y ++ + HY+T G K G P F +Y+A + D+
Sbjct: 265 FSIDWYRKNYPEIDEY----SISPIEHYLTIGFKLGLTPSERFDGNDYLARYPDVQQEGV 320
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFV 481
+ H+ FG EGR
Sbjct: 321 NP-------LLHYLMFGKNEGRTF 337
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSY 576
+N F Y ++ + I+ ++ +P +H+ G++ G S F+ + YL Y
Sbjct: 260 QNSGLFSIDWYRKNYPE-IDEYSISP------IEHYLTIGFKLGLTPSERFDGNDYLARY 312
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
D+ + HY+ G EGR
Sbjct: 313 PDV----QQEGVNPLLHYLMFGKNEGRTF 337
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
Y I + ++H+ G G + FD YL Y D++ + H
Sbjct: 270 YRKNYPEIDEYSISPIEHYLTIGFKLGLTPSERFDGNDYLARYPDVQQ----EGVNPLLH 325
Query: 426 YITHGVKEGRN 436
Y+ G EGR
Sbjct: 326 YLMFGKNEGRT 336
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 13/87 (14%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
N F Y ++ ++ +H+ G + G + FD YL Y
Sbjct: 261 NSGLFSIDWYRKNYPEIDEYSISP-------IEHYLTIGFKLGLTPSERFDGNDYLARYP 313
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRN 520
D++ + HY+ G EGR
Sbjct: 314 DVQQ----EGVNPLLHYLMFGKNEGRT 336
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFA 541
F Y +Y ++ + HY+T G K G P + F +Y+A + D+
Sbjct: 265 FSIDWYRKNYPEIDEY----SISPIEHYLTIGFKLGLTPSERFDGNDYLARYPDVQQEGV 320
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI 565
+ H+ FG EGR+
Sbjct: 321 NP-------LLHYLMFGKNEGRTF 337
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+S +E + ++ +Y A Y D+ Q + + H+ FG +EGR
Sbjct: 282 ISPIEHYLTIGFKLGLTPSERFDGNDYLARYPDVQQ----EGVNPLLHYLMFGKNEGRTF 337
>gi|237798854|ref|ZP_04587315.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|237806170|ref|ZP_04592874.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331021708|gb|EGI01765.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331027283|gb|EGI07338.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 1498
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
++ Y + + ++ +I + + + + ++ G + N
Sbjct: 331 TGSDHSTYGVAERDENGTDRNSIVGNTISHTSKGLTLVYGEGSFAGDAFPLVTVQGTDAN 390
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI E ++G +G D V G + +++ +G D G +G DTF + + Y+
Sbjct: 391 DTITGGAANELILGLAGKDTVNGGAGDDILVGGAGADKLTGGAGADTFRFDQLTDSYRTA 450
Query: 320 RFENAIIVYD 329
+V D
Sbjct: 451 TSSATDLVSD 460
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 1398 TGNTLDNVLYAGTGDNV---LDGRDGNDTVSY-LFATAGVTVALNTSAVQTTGG--SGLD 1451
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ T E++ GS D + GN NV +GND G +G D
Sbjct: 1452 TIKGT--ENLSGSQFADSLTGNKNANVLNGGNGNDTLSGGAGDDVLIGG 1498
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 257 EKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N+ T E+ G+ GND ++G ++ +G+DV +G +G D + A +
Sbjct: 786 VGNVAPGILTGTENAEALYGTEGNDTLLGLGGDDTLRGDTGDDVINGGAGRDALYGGADA 845
Query: 314 YLYKIYRFENAIIVYDANE-HKQDFLSDV 341
+ ++ YDA D + D
Sbjct: 846 DTFVYSALTDSYRDYDAGGLTATDTIYDF 874
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 9/154 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSAN 286
DD D + I +S++ Y +E+ V+ +SG GN+ +
Sbjct: 1350 DDAADRVVETNADKQIGGTDTVYSALSSYT------LGANLENIVITASGAANATGNTLD 1403
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
NV + +G++V DG G DT Y + + +A+ + D + E L
Sbjct: 1404 NVLYAGTGDNVLDGRDGNDTVSYLFATAGVTVALNTSAVQTTGGS--GLDTIKGTENLSG 1461
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ K ++L + L G DV
Sbjct: 1462 SQFADSLTGNKNANVLNGGNGNDTLSGGAGDDVL 1495
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G T+ + + G++G D + G + + + D+ G +G D F Y +
Sbjct: 536 GTAGGDTLTGTEGNDIINGNAGADRINGGAGADTLTGGADADILTGGAGADVFIYTSRLD 595
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y+ Y ++ DF + +R+ + + + + + Y + D
Sbjct: 596 SYRNYNASG----TKQSDTITDFNTAEDRIDLSSIGLRGLGDGSANTI-YLSLNAD 646
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 10/129 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ ++ Q D G D D+ ++ + + + +S S +
Sbjct: 1226 GHIFGTSDDDTLVGSASNDILDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDT 1285
Query: 256 YEKNMTIAQHTVIES-------VVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ +E+ + +GN +V+ GN+ NNV +G D+ G G D
Sbjct: 1286 VVSSVSWTLGANVENLLLTGVSAINGTGNALRNVMTGNANNNVLDGGAGADLLTGGDGSD 1345
Query: 306 TFFYYAPSY 314
+++ +
Sbjct: 1346 SYYVDDAAD 1354
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+++N++ G D G G D + + +
Sbjct: 1227 HIFGTSDDDTLVGSASNDILDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ ++VE L + R+++ A+ L G D+
Sbjct: 1287 VSSVSWTLGANVENLLLTGVSAINGTGNALRNVMTGNANNNVLDGGAGADLLTG 1340
>gi|218675911|ref|YP_002394730.1| hypothetical protein VS_II0128 [Vibrio splendidus LGP32]
gi|218324179|emb|CAV25402.1| Hypothetical protein VS_II0128 [Vibrio splendidus LGP32]
Length = 522
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++GNS +N F +S N+ FDGS G D Y I + + D +S
Sbjct: 446 ILGNSQDNYFEGNSANNTFDGSDGTDVLKINGNKNDYSIEKLAGGVTKISGKSIGTDKIS 505
Query: 340 DVERLRFADQCI 351
+VE ++F D+ +
Sbjct: 506 NVEYIKFNDEVV 517
>gi|73956582|ref|XP_848890.1| PREDICTED: similar to matrix metalloproteinase 23B precursor [Canis
familiaris]
Length = 394
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 32/142 (22%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDI 79
W ++ + Y+ + LS + + +A A WS V +F E + SD+
Sbjct: 91 RWDHFNLTYRILSFPRNLLSP-----SETRRGLA-TAFRMWSDVSPFSFREVAPEQPSDL 144
Query: 80 KFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG------ 117
+ + T +F I+FD ++ W G +
Sbjct: 145 RIGFYPVNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGV 204
Query: 118 --TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 205 WLTDLVHVAAHEIGHALGLMHS 226
>gi|84393205|ref|ZP_00991968.1| hypothetical protein V12B01_24184 [Vibrio splendidus 12B01]
gi|84376171|gb|EAP93056.1| hypothetical protein V12B01_24184 [Vibrio splendidus 12B01]
Length = 7629
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 15/103 (14%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
V N IDL + ++ + ++ G +GND ++G + ++ GND
Sbjct: 7454 VANPIDL------DLSSETDDVQLLASNFDTNLTGGTGNDRLVGGAGDDTLVGGDGNDTL 7507
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G G D + + + + +D ++D
Sbjct: 7508 IGGGGSDILTGGNGMDSF---------VWLNIEDGVEDTITDF 7541
>gi|123443181|ref|YP_001007155.1| putative hemolysin [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122090142|emb|CAL13005.1| putative hemolysin [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 483
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 50/137 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E N TI +++ G +GND+++G + + F GNDV G +G D A
Sbjct: 152 VTGGEGNNTITGGDKNDNLAGGNGNDLIMGYDSFDSLFGEGGNDVLVGGNGNDGLTGGAG 211
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ + + + + F + D + + + + +DL
Sbjct: 212 DDFLDGGDGDDDLEGDAGGLYASEAQWRGNDILFGGKGNDRIRGGKNNDYLAGGTGDDLY 271
Query: 373 QVIGQDVFESMKHFYEF 389
D + + +
Sbjct: 272 VFSAYDGINMIVEYADE 288
>gi|319894304|gb|ADV76433.1| RTX toxin RtxA [Vibrio vulnificus]
Length = 4700
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 66/221 (29%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+L+ +++ + GG K++ + G G+DV +N
Sbjct: 4323 DFLRNSGHLQGDGDINLSLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGTSN 4381
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 4382 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 4440
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ S G D+
Sbjct: 4441 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGDDFANVFGNYNRINASAGNDVV 4500
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N + AA + EGR+
Sbjct: 4501 -----KLMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4536
Score = 40.1 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 26/136 (19%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL----------DLTL---IGGVKNYIDLNTESWSSI 253
Y + T+Y G+D + D + + G Y D+N
Sbjct: 38 YGGDDHVTVGSIGATVYTGSGNDTVVGGSAYLRVEDTSGHLSVKGAAGYADIN------- 90
Query: 254 GGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFF--ESSGNDVFDGSSGLDTFF 308
+ N++ A I+ + G+ G+ G +A N SGN F G+ G + +
Sbjct: 91 KSGDGNVSFAGAAGGVSIDHL-GNHGDVNYGGAAAYNGITRKGLSGNVTFKGAGGYNALW 149
Query: 309 YYAPSYLYKIYRFENA 324
+
Sbjct: 150 HETNQGNLSFAGAGAG 165
>gi|254441080|ref|ZP_05054573.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198251158|gb|EDY75473.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 653
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 7/121 (5%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
IYG NN + + + ++ + G+D L+ GG + + + +I
Sbjct: 438 IYGDTNV---NNSLGGDDKLRGGAGNDELHGNDGNDELN----GGSGDDVLFGDQGNDNI 490
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E + A + + G +GND + GN + SGND G +G+D S
Sbjct: 491 SGGEGDDWAAGGVGEDKLRGGAGNDELHGNDGEDYLSGGSGNDTLAGGNGVDKIVGGNGS 550
Query: 314 Y 314
Sbjct: 551 D 551
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 60/193 (31%), Gaps = 20/193 (10%)
Query: 200 GSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IG 254
GS GN+ + + G+D+++L D +
Sbjct: 377 GSRGNDTLIACCGDDTLNAGWGDDKAFGGDGNDVINLEKGN------DFAEAGLGDDVVN 430
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + I T + + +G G+D + G + N+ + GND +G SG D F +
Sbjct: 431 GGEGDDVIYGDTNVNNSLG--GDDKLRGGAGNDELHGNDGNDELNGGSGDDVLFGDQGND 488
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ A +D L + L D L + +
Sbjct: 489 NISGGEGDDWA----AGGVGEDKLRGGAGNDELHGNDGEDYLSGGSGNDTLAGGNGVDKI 544
Query: 372 IQVIGQDVFESMK 384
+ G D E
Sbjct: 545 VGGNGSDEIEGGA 557
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 60/192 (31%), Gaps = 14/192 (7%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + TI G++ + D +G NYID T ++I
Sbjct: 7 TVGNGNNRINAGDGANTIATGAGNNFIIGGIGADTITVGNGNNYIDSGTFGANTITAGFG 66
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I ++++ G++++ N GNDV G DT A + +
Sbjct: 67 NNFIITGNAVDTITAMGGDNIINAGDGVNTVTTGVGNDVIAVGVGADTVTSGAGDDIASV 126
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D L + ++D + V+ + Y ++ D I
Sbjct: 127 VGGADTVTT----GAGYDRLV----IDYSDFSTNMVSSPVTGAVSYIGNFGDGAANIVSF 178
Query: 379 VFESMKHFYEFG 390
H G
Sbjct: 179 TAVEEFHITTGG 190
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 8/143 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY-E 257
G++I + V D+ YD D D + T + S IG + +
Sbjct: 116 TSGAGDDIASV-VGGADTVTTGAGYDRLVIDYSDFSTNMVSSPV----TGAVSYIGNFGD 170
Query: 258 KNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
I T +E + GND +I + ++ +G+D DG +G+DT S L
Sbjct: 171 GAANIVSFTAVEEFHITTGGGNDTIITGAGADILDSGAGSDTLDGGAGIDTILAGFGSDL 230
Query: 316 YKIYRFENAIIVYDANEHKQDFL 338
++ DA+ D L
Sbjct: 231 IYGRIGDSIDGGEDADNSDVDVL 253
Score = 43.6 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 33/116 (28%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ +GN+ + N +GN+ G G DT + F I
Sbjct: 4 DTITVGNGNNRINAGDGANTIATGAGNNFIIGGIGADTITVGNGNNYIDSGTFGANTITA 63
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + V+ + + + + + +G D S
Sbjct: 64 GFGNNFIITGNAVDTITAMGGDNIINAGDGVNTVTTGVGNDVIAVGVGADTVTSGA 119
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 29/124 (23%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + G + + + NN G D +G +
Sbjct: 5 TITVGNGNNRINAGDGANTIATGAGNNFIIGGIGADTITVGNGNNYIDSGTFGANTITAG 64
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F N I+ + + D ++ + + G D+
Sbjct: 65 FGNNFIITGNAVDTITAMGGDNIINAGDGVNTVTTGVGNDVIAVGVGADTVTSGAGDDIA 124
Query: 381 ESMK 384
+
Sbjct: 125 SVVG 128
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 26/106 (24%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D + + NN G + +G + + + N I +
Sbjct: 2 AADTITVGNGNNRINAGDGANTIATGAGNNFIIGGIGADTITVGNGNNYIDSGTFGANTI 61
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + +I+ + +G DV
Sbjct: 62 TAGFGNNFIITGNAVDTITAMGGDNIINAGDGVNTVTTGVGNDVIA 107
>gi|329851823|ref|ZP_08266504.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328839672|gb|EGF89245.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 702
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 41/126 (32%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N T +++ G+ GND + G ++ SGND G +G DT++
Sbjct: 36 YTGGTGNDTYTGGNDNDTINGAGGNDSLSGGGGHDRLDGGSGNDTLVGGAGNDTYYTDVI 95
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ E +V + L + +++ + Y L
Sbjct: 96 GDVIVELEGEGRDLVVSSRSFNMSGLLVEDVTLLGSSDFSVTGNGLSNVITGNSGYNALS 155
Query: 373 QVIGQD 378
G D
Sbjct: 156 GGAGHD 161
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + +S G N+ I ++ ++ G +G+D + G S + GND DG
Sbjct: 129 LGSSDFSVTGNGLSNV-ITGNSGYNALSGGAGHDTIYGGSGRDTITGGDGNDSLDGGGSR 187
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D+ A + Y + + ++ H Q
Sbjct: 188 DSMTGGAGNDTYVVDDSSDRVVELIGQGHDQ 218
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYID-----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ GG+D LD + D L S+ GY +++ +S+ G +G
Sbjct: 262 LFGHGGNDSLDGDAGDDRLDGGDGNDTLLGGAGSDSLQGYAGTDSVSGGDGNDSLYGYTG 321
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+D ++G N+ + +GND G +G DT F L
Sbjct: 322 DDTLLGEGGNDYLYGDAGNDTLTGDAGNDTLFAGGGLDL 360
Score = 50.5 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 74/217 (34%), Gaps = 34/217 (15%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G GN+ Y I ++ + T GG D + +L +G + +N
Sbjct: 382 GGTGNDTYAI----YNASTLLTEVAGGGLDEIWSSLATYT-------------LGEHFEN 424
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I + I +G++ N+V+ GN+A N ++G D G +G DT+ + ++
Sbjct: 425 LRIDVNDGI--GIGNNKNNVITGNNAANRLDGAAGTDTLAGLNGNDTYVIDGNDVVVELD 482
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS----------ILEYTASYE 369
I + DF VE L S +L +
Sbjct: 483 GGGTDQISASFSYGLADF---VENLTLTGTGNLEGTGNSMSNSLTGNNGNNLLNGDGGSD 539
Query: 370 DLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY 404
+ +G D +S EGRD+ Y
Sbjct: 540 TMTGGLGNDTYYVQSAGDVVVENAGEGRDMVASWVSY 576
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 1/123 (0%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S+S G +++T+ + + + GN +IGN NNV + DV G G D F
Sbjct: 575 SYSLFGTVVEDLTLIGPAGLSATGNTLGN-TLIGNDGNNVLNGMASRDVLTGGLGADIFL 633
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ A S +I F A +++ + + + + A
Sbjct: 634 FTAGSGGDRITDFNAAQNDRIDINAYTAGVANTGIVTQSGANVIIALGGSNIVTVLDAVR 693
Query: 369 EDL 371
D+
Sbjct: 694 ADV 696
Score = 44.0 bits (102), Expect = 0.096, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 6/176 (3%)
Query: 204 NNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ +Y + T+ +GG D N + N+ S + + G+ N ++
Sbjct: 217 DQVYTTITTSLAAYVEDLTLLGTGGID----GSGNAENNVVTGNSGS-NRLFGHGGNDSL 271
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G GND ++G + ++ +G D G G D+ + Y
Sbjct: 272 DGDAGDDRLDGGDGNDTLLGGAGSDSLQGYAGTDSVSGGDGNDSLYGYTGDDTLLGEGGN 331
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + N+ + + + + L+ G D
Sbjct: 332 DYLYGDAGNDTLTGDAGNDTLFAGGGLDLLMAGAGNDRLQDNIGEASTLVGGTGND 387
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 67/239 (28%), Gaps = 53/239 (22%)
Query: 199 KGSLGNNIYKIEVQQKD---------SPFIQTI------------------YDSGGDDLL 231
G GN+ Y ++ TI D G+
Sbjct: 191 TGGAGNDTYVVDDSSDRVVELIGQGHDQVYTTITTSLAAYVEDLTLLGTGGIDGSGNAEN 250
Query: 232 DLTLIGGVKNYIDLNTESWS-----------------SIGGYEKNMTIAQHTVIESVVGS 274
++ N + + + S ++ G + ++ + +SV G
Sbjct: 251 NVVTGNSGSNRLFGHGGNDSLDGDAGDDRLDGGDGNDTLLGGAGSDSLQGYAGTDSVSGG 310
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND + G + ++ GND G +G DT A + F +
Sbjct: 311 DGNDSLYGYTGDDTLLGEGGNDYLYGDAGNDTLTGDAGNDTL----FAGGGLDLLMAGAG 366
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D L D + + Y AS L +V G + E + L E
Sbjct: 367 NDRLQD----NIGEASTLVGGTGNDTYAIYNAS-TLLTEVAGGGLDEIWSSLATYTLGE 420
>gi|126726594|ref|ZP_01742434.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2150]
gi|126703923|gb|EBA03016.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2150]
Length = 1243
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ ID + N I + + +V +GND + G + ++ + + ND D
Sbjct: 706 DDTIDAFYTGDPEGDMVDANDNIVDGSNDDLIVAGAGNDSIFGGAGDDTIYGGADNDTID 765
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIV---YDANEHKQDFLSDVERL 344
GS+G + + L+ + + + DA + D LS V+ +
Sbjct: 766 GSTGSNEIYGGTGDDLFILNETFDGNDIEGGEDAGDGDVDVLSAVDVI 813
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 6/118 (5%)
Query: 257 EKNMTIAQHTVI-----ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
E +M A VI + + G GND + G +A++ + +D G +G DT F
Sbjct: 129 EGDMVDANDAVIGVGNEDIIYGYGGNDTIYGAAADDTIYGGDDSDRIYGGAGDDTLFGGE 188
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S ++ + + + + + AD + K I + ++
Sbjct: 189 GSDVFNLEDSFGEDSIVGGETGSNSDIISADSVT-ADLDVTFTGDKAGEISDGVSTAT 245
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 48/348 (13%), Positives = 97/348 (27%), Gaps = 63/348 (18%)
Query: 57 WALGEWSKVVDLTFE-----------ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFD 105
+ + +D+TF T+ S+I+ I + +G S M I
Sbjct: 216 ISADSVTADLDVTFTGDKAGEISDGVSTATFSEIEAIETGSGNDTVDASASTVGMSIAVG 275
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
D G + G + + + ND+ Y
Sbjct: 276 TGDDTVTGTSGDDEIKL---------------GDGAVDSDTVILTDGFGNDTIG-----Y 315
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ----- 220
F +D +F V D+ ++ + G P + + +P +
Sbjct: 316 FDSPTDNLDGTFTGVD---VFDVTSLTNLAGDPVTTDDVVVSDTNGDGTGAPILTFPNGE 372
Query: 221 --------TIYDSGGDDLLDLTLI-------------GGVKNYIDLNTESWSSIGGYEKN 259
++ D G +L+ I + ID + + N
Sbjct: 373 SVTLDTTLSVADLGNTAILNAIGIPSPAAALDGTVDGTLNDDTIDTSYTDDPHGDMVDNN 432
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + + G+D V ++ G D DG +G D F + S + +
Sbjct: 433 DNVVDGSNDDYIFADYGDDSVSAGLGDDTVIGWWGEDTIDGGTGDDALFGGSESDTFIVN 492
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ AN+ DV+ + ++ D +
Sbjct: 493 ENFGNDQIDGANDGDG---LDVDVVDASNMTSDLTLTLDQPSGGTLTD 537
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 55/180 (30%), Gaps = 20/180 (11%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ GN+I E + + D G+ LDL+ G ++ G
Sbjct: 785 NETFDGNDIEGGEDAGDGDVDVLSAVDVIGNLTLDLSANGASD-------PESGTLTGGP 837
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-------SGLDTFFYY 310
++T IE V SGND VIG+S ++ G+D DG G
Sbjct: 838 GDVTF---EEIEVVNLGSGNDTVIGSSGDDTVHAGLGDDTLDGGAGDDTFDGGGGNDTIS 894
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ I + + D LS E DQ I + D
Sbjct: 895 GGADDDTILQSGGDDTAFGGT--GTDTLS-TENSDVDDQTITVNVDDNGDGSSLLNGFGD 951
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D +D+ + + + L + S G + A IE + SG+D V
Sbjct: 505 DGDGLD-VDVVDASNMTSDLTLTLDQPSG-GTLTDGVNTATTEYIEQYILGSGDDTVTSL 562
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + G DV + SG D + + + ++V+ ++ D + + E
Sbjct: 563 YSVDTIDLGEGADVINAGSGND--VIDLGNDGGALGDGDADVMVF-SDGDGNDTIENFE 618
>gi|328676879|gb|AEB27749.1| RTX-family exoprotein [Francisella cf. novicida Fx1]
Length = 1292
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 56/139 (40%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G +D +D+ G + + L + + G ++ A + ++ G +GND++ G
Sbjct: 1072 TGTNDAVDVVYAGAGDDTVYLGSGDDIADAGDGDDIVKALNGGNNTIEGGAGNDILYGGL 1131
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ + SG+DV +G +G DT+ A K + + D S+VE
Sbjct: 1132 GDDTIYSGSGDDVLEGGAGADTYVIDANDTGTKTIKMSSNDDSIDTIRLDGVSSSNVEFE 1191
Query: 345 RFADQCIDSVNVKQRSILE 363
D + ++
Sbjct: 1192 AVDDDLAILLRGNSGDLIS 1210
Score = 40.9 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 29/97 (29%), Gaps = 8/97 (8%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG------SSGL 304
S+I G E N TI + + G+D + N +NN D G
Sbjct: 124 SAIIGTEDNDTIYTGISDDVIEAGKGDDTIYLNGSNN--NGYLNQDTSFNVVKYNLGDGF 181
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
DT A + + + D + V
Sbjct: 182 DTLIGGANTSNTLSFGQGITQDDLSFKKDGSDLIIQV 218
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 14/132 (10%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES--------VVGSSGN 277
G + +++ I T +SS K++ +A TV++ ++G+ N
Sbjct: 78 GNELTININNDPNQGLRI---TNFFSS--SRIKDIKLADGTVLDRNSEQINSAIIGTEDN 132
Query: 278 DVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D + +++V G+D S + + S+ Y + + +
Sbjct: 133 DTIYTGISDDVIEAGKGDDTIYLNGSNNNGYLNQDTSFNVVKYNLGDGFDTLIGGANTSN 192
Query: 337 FLSDVERLRFAD 348
LS + + D
Sbjct: 193 TLSFGQGITQDD 204
Score = 37.8 bits (86), Expect = 6.9, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 258 KNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGNDVF---DGSSGLDTFFYYAPS 313
+ TI +++ +++ + GND + N+V GND D S+ + Y
Sbjct: 244 SDGTILDDSILRNIISGTDGNDTLSTELFNDVIVGGEGNDTINASDSSTNKNIIRYNLGD 303
Query: 314 YLYKIYRFENAI 325
+ + +I
Sbjct: 304 GNDIVNGYFESI 315
>gi|89056172|ref|YP_511623.1| hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
gi|88865721|gb|ABD56598.1| Hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
Length = 1462
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 22/161 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDS----------------GGDDLLDLTLIGGV 239
GA ++G Y I + + +D + LDL +
Sbjct: 1049 GANTVTIGGVTYTITLTSQGDAAQNGYWDGQPWTTDQSFRVRIEVENAPETLDLGFGSTI 1108
Query: 240 KNYIDLNTESWSSIGGYEKN-MTIAQHTVI-----ESVVGSSGNDVVIGNSANNVFFESS 293
+ + ++ + N +I I +++ G +GND + G N+V +
Sbjct: 1109 NQAVTDESYAFDNFAVVSTNDTSIDPTDFINTGNDDTIEGGAGNDEIYGEEGNDVLDGGA 1168
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
ND G G D+ A + + ++ D +
Sbjct: 1169 DNDTLFGGDGDDSVQGGAGQDSLIGGQGNDTLVGGDDADWI 1209
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 3/99 (3%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ IY +GG L D + G N TI + + G + ND
Sbjct: 217 FEIIYQNGGTS---GQLGLVTDVQFDAVPTDDDELFGEAGNDTITGGFGDDLLDGGTNND 273
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
V+ G S N+ SGND DG +G D+ + +
Sbjct: 274 VLDGGSGNDTLIGGSGNDTLDGGAGQDSLEGGTGADVLT 312
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 41/109 (37%), Gaps = 2/109 (1%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + I + +S+ G G+D + G+ N+ +G+D G + D F +
Sbjct: 790 DGSTLIFDSSGADSLFGGLGDDTISGDFGNDTIDGGAGDDSLSGGAEQDVFQFTDGFGTD 849
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ E + + + ++ + D+ D + +E+T
Sbjct: 850 TVDGGEAGDDLDTLDFSQMTT--GIDVMFDGDEQGDVSDTGSTDSVEFT 896
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 63/195 (32%), Gaps = 6/195 (3%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A Q ++ G + + E + +G D + D G V + ++
Sbjct: 835 AEQDVFQFTDGFGTDTVDGGEAGDDLDTLDFSQMTTGIDVMFDGDEQGDVSDTGSTDSVE 894
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+++I + Q I+ S+ + +IGN + SGND G G T
Sbjct: 895 FTNIERVDG---TGQDDTID-AGASNADQTLIGNDGADSIVGGSGNDTLYGDGGTSTPAN 950
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
Y + ++ F V L S +++ + L + +Y+
Sbjct: 951 GTLIYADNFDGGNDGGWGSTPTDNTDPFFGSV--LGRVQGTASSTDIEAQRTLTFDPAYD 1008
Query: 370 DLIQVIGQDVFESMK 384
D + +S
Sbjct: 1009 DAVIEFDFHRIDSWD 1023
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
++ G ++ + G A + +GND G +G D APS
Sbjct: 3 TINGDGTDNTLTGTGAADDITGFAGNDTITGGNGNDAIDGGAPS 46
>gi|260363438|ref|ZP_05776284.1| Ig domain protein [Vibrio parahaemolyticus K5030]
gi|260876569|ref|ZP_05888924.1| putative RTX toxin [Vibrio parahaemolyticus AN-5034]
gi|260895071|ref|ZP_05903567.1| putative RTX toxin [Vibrio parahaemolyticus Peru-466]
gi|308085969|gb|EFO35664.1| putative RTX toxin [Vibrio parahaemolyticus Peru-466]
gi|308093615|gb|EFO43310.1| putative RTX toxin [Vibrio parahaemolyticus AN-5034]
gi|308113743|gb|EFO51283.1| Ig domain protein [Vibrio parahaemolyticus K5030]
Length = 3199
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND++ G N+ F + ND+ G G D ++K I V
Sbjct: 3047 DTIYGGAGNDILFGQGGNDKLFGGADNDILIGGLGSDILTGGDGEDIFK------WIDVA 3100
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + DF S + L F+D D + +L S
Sbjct: 3101 NERDTVTDFSSSEDSLDFSDLFDDLSKDEVGDLLSDLQS 3139
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
YI N + Y++ TI + + G GND + G + N++ G+D+ G
Sbjct: 3029 YITENQAEFEQSRYYDQADTIYGGAGNDILFGQGGNDKLFGGADNDILIGGLGSDILTGG 3088
Query: 302 SGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G D F + + + F ++ D ++ D D
Sbjct: 3089 DGEDIFKWIDVANERDTVTDFSSSEDSLDFSDLFDDLSKD 3128
>gi|258543239|ref|YP_003188672.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01]
gi|256634317|dbj|BAI00293.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01]
gi|256637375|dbj|BAI03344.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-03]
gi|256640427|dbj|BAI06389.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-07]
gi|256643484|dbj|BAI09439.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-22]
gi|256646539|dbj|BAI12487.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-26]
gi|256649592|dbj|BAI15533.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-32]
gi|256652580|dbj|BAI18514.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655636|dbj|BAI21563.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-12]
Length = 220
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 62/190 (32%), Gaps = 8/190 (4%)
Query: 399 FDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
FD++ Y Y + + + Y G G +P+ + E+ +
Sbjct: 13 FDAHWYRTEYGAIMDALLSFSDQELEQWYKLEGASSGHSPNRYFNEEWYRVNCSEAAEAI 72
Query: 458 DAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDL--RNVFGSDRGAAARHYITHG 514
V G +H+ N G ++ F YL Y D+ +N+ H++ G
Sbjct: 73 TNGTCV-SGFEHYCNGGYKKFSPHYLFSERYYLQRYPDISEQNLQSGGFVNGYDHFLRSG 131
Query: 515 VKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL 573
KE R+ F Y+ + + N + P + +H S FNP Y
Sbjct: 132 DKEKRSGHLFFDPDTYLQNRPEDPNLSSLTPFMNLLHSEHTLPNSIVL--SDHFNPAWYR 189
Query: 574 TSYDDLWNVF 583
D
Sbjct: 190 ALSPDAVMAV 199
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 8/154 (5%)
Query: 482 TFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
FD++ Y Y + + + Y G G +P+ + E+ +
Sbjct: 12 PFDAHWYRTEYGAIMDALLSFSDQELEQWYKLEGASSGHSPNRYFNEEWYRVNCSEAAEA 71
Query: 541 ADAPDLVQAGKDHFSNFGYEE-GRSITFNPDLYLTSYDDL--WNVFGSDRSAAAQHYITH 597
V +G +H+ N GY++ F+ YL Y D+ N+ H++
Sbjct: 72 ITNGTCV-SGFEHYCNGGYKKFSPHYLFSERYYLQRYPDISEQNLQSGGFVNGYDHFLRS 130
Query: 598 GMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
G KE R+ + F L + D SL+
Sbjct: 131 GDKEKRSGH---LFFDPDTYLQNRPEDPNLSSLT 161
Score = 44.7 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 38/137 (27%), Gaps = 6/137 (4%)
Query: 373 QVIGQDVFESMKHFYEFGLSE-GRDITFDSYLYLGSYDDLR--NVFGSDRGAAARHYITH 429
+ +H+ G + F YL Y D+ N+ H++
Sbjct: 71 AITNGTCVSGFEHYCNGGYKKFSPHYLFSERYYLQRYPDISEQNLQSGGFVNGYDHFLRS 130
Query: 430 GVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G KE R+ F Y+ + + N + P + + +H F+ Y
Sbjct: 131 GDKEKRSGHLFFDPDTYLQNRPEDPNLSSLTPFMNLLHSEHTLPNSIVL--SDHFNPAWY 188
Query: 489 LGSYDDLRNVFGSDRGA 505
D
Sbjct: 189 RALSPDAVMAVEYGFAP 205
>gi|159026906|emb|CAO89157.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 397
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 8/151 (5%)
Query: 198 PKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESW 250
+ ++ + ++ G+D LD TL G N L
Sbjct: 168 NGSGGTDTLHGDDGDDTLLGGSGSDSLDGDAGNDSLDGGSVNDTLFGRTGNDTLLGGSGN 227
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+ G ++ +++ G S ND + GNS ++ GND DG S DT
Sbjct: 228 DSLDGGSGTDSLDGGEDNDTLFGGSDNDTLFGNSEDDSLLGGDGNDSLDGGSENDTLIGG 287
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ + + Y+ + D ++D
Sbjct: 288 DGNDTLTGGSGADQFV-YNNSNEGADTITDF 317
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 52/162 (32%), Gaps = 9/162 (5%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D I G L S + + G N ++ +++ G G+D ++G S ++
Sbjct: 134 TTDSYNIVGSNFNDTLTGGSVADTLFGGNGNDSLNGSGGTDTLHGDDGDDTLLGGSGSDS 193
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHKQDFL---SD 340
+GND DG S DT F + + D L SD
Sbjct: 194 LDGDAGNDSLDGGSVNDTLFGRTGNDTLLGGSGNDSLDGGSGTDSLDGGEDNDTLFGGSD 253
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L + + L+ + + LI G D
Sbjct: 254 NDTLFGNSEDDSLLGGDGNDSLDGGSENDTLIGGDGNDTLTG 295
>gi|3650496|gb|AAC62616.1| metalloprotease mmp21/22A [Homo sapiens]
Length = 390
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 27/146 (18%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNP-NAQEVARWALGEWSKVVDLTFEETS--I 75
R + +R+ LT LSF L+P + A WS V +F E +
Sbjct: 77 RRYTLTPARLRWDHLNLTYRILSFPRNLLSPRETRRALAAAFRMWSDVSPFSFREVAPEQ 136
Query: 76 HSDIKFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG-- 117
SD++ + T +F I+FD ++ W G +
Sbjct: 137 PSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSW 196
Query: 118 ------TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 197 KKGVWLTDLVHVAAHEIGHALGLMHS 222
>gi|188581620|ref|YP_001925065.1| GLUG domain protein [Methylobacterium populi BJ001]
gi|179345118|gb|ACB80530.1| GLUG domain protein [Methylobacterium populi BJ001]
Length = 14829
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 47/128 (36%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N IA + + G G+D++ G ++ G D+ DG +G+D +
Sbjct: 13894 GNDAIAGGAGDDRIFGQMGDDLIYGEEGSDEIVGGLGRDIIDGGAGVDYLLGDEGRIVRA 13953
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
R +AI+ D H+ L ++ + A + + L + DL+ +G
Sbjct: 13954 YGRDGSAILNSDGTWHRDVVLEEIGTVTAAIATDAQSAAMRTAELAEKLAQADLVLAVGA 14013
Query: 378 DVFESMKH 385
+
Sbjct: 14014 RDGAGARL 14021
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 34/199 (17%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----------------DLTLIGGVKNY-- 242
LG+ ++ V+ + I+ GG D + D + +
Sbjct: 10438 LGSGADRVTVKGTALDTLTAIHGGGGADTITVEASQGTLALFGDTSADRSRYSATDSVRT 10497
Query: 243 ---IDLNTESWSSIGGYEKNM------TIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
I E + G ++ + A VI + G +GND + G N+ +
Sbjct: 10498 GGAIGFRDEGAIDVDGSRVSLDDVIDASGATGLVI--IDGGAGNDTIKGGQGRNLIAGGT 10555
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKI--YRFENAIIVYDANEHKQDFL--SDVERLRFADQ 349
GND +G + D + L + + D + + + D
Sbjct: 10556 GNDRIEGGASADVILGDSSFNLDDVKRVVTIADPFIEQDRAKGDDTIDAKGGDNVILGDH 10615
Query: 350 CIDSVNVKQRSILEYTASY 368
+ + + + T ++
Sbjct: 10616 GQIYQDGSETAGIALTGNH 10634
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 28/180 (15%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-----YAPSYLYKIYRFENAI 325
GND + G + ++ + G+D G G D ++ + A
Sbjct: 13786 ATDGGGNDTIEGGAGDDFLYGQQGDDRLYGGEGDDDLTGGHNVLGGADGNDGLFGGDGAD 13845
Query: 326 IVYDANEHKQD--FLSDVERLR-------FADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
++ N + DV+ + F+D + +V + ++++ + + G
Sbjct: 13846 VILGDNGVITRNVLVDDVKAVAWQRNPGPFSDTVM--RDVLRFDLIDFVGGNDAIAGGAG 13903
Query: 377 QDV-FESMKH---FYEFGLSE-----GRDITFDSY---LYLGSYDDLRNVFGSDRGAAAR 424
D F M + E G E GRDI LG + +G D A
Sbjct: 13904 DDRIFGQMGDDLIYGEEGSDEIVGGLGRDIIDGGAGVDYLLGDEGRIVRAYGRDGSAILN 13963
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 58/202 (28%), Gaps = 36/202 (17%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIY-DSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+YG GN++ TIY DS LD+T + ID S S
Sbjct: 14170 LYGTNNVLAGNDVID------GGAGNDTIYGDSSETYTLDVTAYAALNGQIDKVAASASD 14223
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G S G D++ G + + + GND G G D A
Sbjct: 14224 LLGVF-------------ATLSRGVDLLQGGPSRTIAY---GNDHILGGEGDDVIVGDAA 14267
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I + + L +D D +V + + +
Sbjct: 14268 R---TIVQGSGPLRSLSVEAA----------LALSDTLSDMRSVITDLAMTGRVAQAAVT 14314
Query: 373 QVIGQDVFESMKHFYEFGLSEG 394
+ + +GL EG
Sbjct: 14315 AKLEAMAQRPLNEILAYGLPEG 14336
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 16/179 (8%)
Query: 219 IQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNM----TIAQHTVI 268
+ T GGDD + +L L G ++ ID + +G + + +A T +
Sbjct: 13548 VSTDTALGGDDTIRAGAGDNLVLGGFGRDTIDTGAGADIVLGDSGEALFERGVVASVTTL 13607
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V G+ D + +N+ F G D +G D + A+
Sbjct: 13608 DAVNGAG--DTIRAGEGDNLVFGGLGGDAITTGAGNDAILGDQGRAGFSGGVLV-ALETI 13664
Query: 329 DANEHKQDFLS--DVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMK 384
D N D + D + L F D + ++ DL G+ V +
Sbjct: 13665 DPNAGGDDQIVAGDGDNLVFGGAGADRIVTGAGADMILGDNGRADLALAGGRAVIRRVA 13723
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+AQ ++ +G G+D + + +N+ G D D +G D + L++
Sbjct: 13543 GLAQAVSTDTALG--GDDTIRAGAGDNLVLGGFGRDTIDTGAGADIVLGDSGEALFERGV 13600
Query: 321 FENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRS 360
++ DA D + E L F D++ +
Sbjct: 13601 V-ASVTTLDAVNGAGDTIRAGEGDNLVFGGLGGDAITTGAGN 13641
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 20/127 (15%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQH------------TVIESVV 272
GG+D +D+ G N + + S + N I V+ +
Sbjct: 11828 GGNDTIDV---GAGDNVV--IAGAGSDAVTALGGNDVILGDGGYAEFEAGLRALVVSTDA 11882
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+G D + +NV SGND +G D ++ D
Sbjct: 11883 AGAGADRLAMGDGDNVVLGGSGNDTIITGAGADIVLGDNGR--IAFAGGIRLEVITDRIG 11940
Query: 333 HKQDFLS 339
D ++
Sbjct: 11941 GGADTIT 11947
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 226 GGDDLL-----DLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGS---SG 276
GG D + D + GGV D+ + I G + T AQ ++ + + +G
Sbjct: 11478 GGGDRIVAGEGDNVVFGGVGAD-DITAGAGRDVILGDDGLATFAQGVLVRAATKNESVAG 11536
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+D + +NV SGND G D F + +
Sbjct: 11537 DDTIRAGDGDNVVLGGSGNDTITTGIGADIVFGDNGAVDF 11576
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 16/125 (12%)
Query: 226 GGDDLLDLTLIGGVKNYI-------DLNTESWSSIGGYEKNMTIA-QHTVIESV---VGS 274
GG+D + + GG N I + S S + + + +E V
Sbjct: 12002 GGNDDIRV---GGGDNLIIGGTGADTVTALSGSDVIIGDNGYAVFEAGVRVEFAATDVSD 12058
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND + +N+ SG+D G D Y++ A IV D N
Sbjct: 12059 GGNDRIEAGDGDNLVLGGSGSDTITTGKGADIVLGDNGLVAYELGI--RARIVSDRNGGA 12116
Query: 335 QDFLS 339
+D ++
Sbjct: 12117 RDSIA 12121
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 17/173 (9%)
Query: 224 DSGGDDLL------DLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQH-TVIESVVGS- 274
++GGDD + +L G + I + +G ++ +A VI V +
Sbjct: 13667 NAGGDDQIVAGDGDNLVFGGAGADRIVTGAGADMILGDNGRADLALAGGRAVIRRVASTD 13726
Query: 275 ---SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+D + N+ +G DV G G D F Y + + + A+ ++ A
Sbjct: 13727 PLAGGDDRIEAGDGNDYAAGGTGADVILGGGGHDVLFGDHMLYDWALPVNQRAVSIFTAA 13786
Query: 332 E--HKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + + + Q D + T + L G D
Sbjct: 13787 TDGGGNDTIEGGAGDDFLY-GQQGDDRLYGGEGDDDLTGGHNVLGGADGNDGL 13838
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 61/182 (33%), Gaps = 18/182 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGY 256
G+N Y + F T GG+D + +L L G + I T + I
Sbjct: 12036 GDNGYAVFEAGVRVEFAATDVSDGGNDRIEAGDGDNLVLGGSGSDTI--TTGKGADIV-L 12092
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N +A I + + S N A + +G DV G G DT
Sbjct: 12093 GDNGLVAYELGIRARIVSDRN-----GGARDSIATGAGADVVLGGLGADTIDAGKIDADA 12147
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I +N I +DA + S + F D V +L S D++ +G
Sbjct: 12148 DIVFGDNGQITFDAQGRVKRAESL--DVGFGDDDTIEVGGGDNIVLGGAGS--DVVTALG 12203
Query: 377 QD 378
+
Sbjct: 12204 GN 12205
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 11/131 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + T+ G D + ++G + + ++ S + + G IA T
Sbjct: 10775 GGDDSIETGNGDVTVIGGAGADRI---ILGKGRQVVLGDSGSATFVDGR-----IATITS 10826
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + +G GND + + +G D + +G + L+ R + +
Sbjct: 10827 LATAIG--GNDTITSVEGDTTILGGAGADTIEVGAGNHVILGDSGRALFDAGRLASIESI 10884
Query: 328 YDANEHKQDFL 338
D+ D +
Sbjct: 10885 -DSGIGGDDVI 10894
Score = 44.0 bits (102), Expect = 0.090, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 46/158 (29%), Gaps = 19/158 (12%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
LG+N Y + + F T D G D++ GG + I + I
Sbjct: 12379 NDVILGDNGYAVFEGGVRAAFASTDPDDGARDVIS----GGDGDNIVIAAGGADDITTGA 12434
Query: 258 KNMTIAQH---TVIESVVG----------SSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
I E+ +G DVV +N+ F +G D G
Sbjct: 12435 GADIILGDMGVVTFENGRVQEVYTTDERRGAG-DVVRAGDGDNIVFGGTGRDEITTGKGA 12493
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
D + R + + N D ++ +
Sbjct: 12494 DLILGDFGEASFTAGRLV-RVASLNPNRGDDDTIAAGD 12530
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 8/132 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ G D +D + + + G + + + +
Sbjct: 11709 GAADTITTGAGADVVLGGRGGDTIDAGKTDADADIV------FGDNGTVQFD-ALGRVKR 11761
Query: 268 IESVVGSSGND-VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
ES+ G+D V +NV +G+D SG D ++
Sbjct: 11762 AESLDPGLGDDDTVEVGGGDNVVIGGAGSDTITALSGNDVVLGDEGRATFEADGRVKRAE 11821
Query: 327 VYDANEHKQDFL 338
+D D +
Sbjct: 11822 SFDVGFGGNDTI 11833
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 47/156 (30%), Gaps = 10/156 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
G LG+N + T GG D L +L + G + I +
Sbjct: 13353 GGADIVLGDNGAAVFAGGLRVSVASTAPADGGKDTLVLGDGDNLAIGGVDADAITTGNGA 13412
Query: 250 ---WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G + ++ + G G+D + + +N+ G D G D
Sbjct: 13413 DVILGDFGAVTYDAAGLLKQILSTETGLGGDDTIEAGAGDNLVVGGFGADTITTEIGADV 13472
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ LY R A DA +D + E
Sbjct: 13473 ILGDSGEVLYAGGRLVQARS-LDAGIGGRDTIKADE 13507
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 46/171 (26%), Gaps = 41/171 (23%)
Query: 198 PKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ G++ + TI G D++ G V + E+ S
Sbjct: 11531 NESVAGDDTIRAGDGDNVVLGGSGNDTITTGIGADIV-FGDNGAVDFLNGVRLEALSERA 11589
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGN------------------------------- 283
G IA + V+G G D++
Sbjct: 11590 GGGGRDVIATGAGADLVIGGLGGDLIDAGKTDADDDIVFGDNGHVTFDALGRVRLAETLD 11649
Query: 284 ---SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
++ +G ++ G +G DT A + I +N + +
Sbjct: 11650 PTLGGDDEIQAGAGANLILGGAGSDTIITGAGAD---IVLGDNGSVTFAGG 11697
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 16/129 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI-------------ESV 271
+ GDD +D G N I + G + + + V+ +++
Sbjct: 10596 AKGDDTID---AKGGDNVILGDHGQIYQDGSETAGIALTGNHVVTRVVSTHTGVGGADTI 10652
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ + GN+V+IG + +GN V G +G F + L A
Sbjct: 10653 IAADGNNVIIGGFGADTITAGAGNHVILGDNGEAVFAGGVLASLRSTAGATGGDDTITAR 10712
Query: 332 EHKQDFLSD 340
+ +
Sbjct: 10713 DGDTTIIGG 10721
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + +NV +G+D SG D +++ A D ++
Sbjct: 12350 GGDDSIDVGGGDNVVIGGTGSDTITSLSGNDVILGDNGYAVFE-GGVRAAFASTDPDDGA 12408
Query: 335 QDFLS--DVERLRFADQCIDSVNVKQRSIL 362
+D +S D + + A D + + +
Sbjct: 12409 RDVISGGDGDNIVIAAGGADDITTGAGADI 12438
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + +NV G+D SG D ++ + D +D
Sbjct: 12523 DDTIAAGDGDNVVLGGFGSDTITTGSGADVVLGDNGLATFRADGKRILVRTTDVEIGARD 12582
Query: 337 FLS--DVERLRFADQCIDSVNVK 357
+ D + L D++
Sbjct: 12583 TIRAGDGDNLVIGGTEADAITTG 12605
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 17/115 (14%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ T GG D + G + + L +I G ++ I I + +
Sbjct: 11172 ARIASTATAIGGADTIRF----GAGSNVVLGGAGGDTITGADRGAVILGDNGIVTFDAAG 11227
Query: 276 -------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
G+D V + +NV +G D G + + ++
Sbjct: 11228 RILRALSIDPAIGGDDTVTVGNGDNVVLGGTGRDAITVGDGNNVVLGDSGQADFE 11282
Score = 42.0 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 22/214 (10%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
++ G D +D+ +I + + + V GND
Sbjct: 12147 ADIVFGDNGQITFDAQGRVKRAESLDVGFGDDDTIEVGGGDNIVLGGAGSDVVTALGGND 12206
Query: 279 VVIGNSANNVFFES------------SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V++G++ +F +GND + G + +
Sbjct: 12207 VLLGDNGYALFEAGVRVEFASTDTTDAGNDRIEAGDGDNLVLGGSGGDT---LVTGKGAD 12263
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + F + L + + + + A + ++ +G D ++ +
Sbjct: 12264 IMLGDNGLVRFELGLRALVQSSRDGGARDSITSG-----AGADVVLGGLGADTIDAGRDD 12318
Query: 387 YEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSD 418
E + G D +TFD+ L + L FG D
Sbjct: 12319 AESDIVLGDDGRLTFDALGRLKRAESLDPTFGGD 12352
Score = 41.3 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 23/77 (29%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+V + G D ++ +N+ + D SG D S Y I
Sbjct: 12972 SVASTAPADGGKDTLMLGDGDNLVIGGTEADAITTGSGADVILGDHGSVSYDAAGLLKQI 13031
Query: 326 IVYDANEHKQDFLSDVE 342
+ D D + +
Sbjct: 13032 LSPDTGLGANDTIVSGD 13048
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Query: 266 TVIESVVGSSGN-DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + G+ D + +NV G D SG DT F A +
Sbjct: 13258 VFVRTTSAAVGDVDEIRAGEGDNVVLGGVGGDTIVTGSGRDTVFGDAGQIRFDAKGLVER 13317
Query: 325 IIVYDANEHKQDFLS 339
D D ++
Sbjct: 13318 AESLDTGIGGDDTIA 13332
Score = 41.3 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 43/158 (27%), Gaps = 18/158 (11%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGN-DVV-----------IGNSANNVFFESSGNDVFDGSS 302
G N TI + V G +G D + G +V +G D+ G
Sbjct: 11551 GGSGNDTITTGIGADIVFGDNGAVDFLNGVRLEALSERAGGGGRDVIATGAGADLVIGGL 11610
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDA------NEHKQDFLSDVERLRFADQCIDSVNV 356
G D I +N + +DA E L + ++ +
Sbjct: 11611 GGDLIDAGKTDADDDIVFGDNGHVTFDALGRVRLAETLDPTLGGDDEIQAGAGANLILGG 11670
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ A + ++ G F EG
Sbjct: 11671 AGSDTIITGAGADIVLGDNGSVTFAGGIRLEVTSSREG 11708
Score = 40.9 bits (94), Expect = 0.70, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 35/115 (30%), Gaps = 10/115 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + T+ G D + L G + ++ S + + G T+
Sbjct: 11003 GGDDAIEAKDGNATVIGGAGADRITL---GQGTQVVLGDSGSATFVDGVIA-------TI 11052
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G+D + + +G+D +G + ++ R +
Sbjct: 11053 LSVATEIGGDDTITATGGDTTILGGAGSDTIKVGAGNHVILGDSGRAAFRNGRAQ 11107
Score = 40.5 bits (93), Expect = 0.83, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Query: 266 TVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
V+ + + G D + +NV G+D SG DT F A +
Sbjct: 12856 VVVRTTSAAVGEADEIRAGEGDNVVLGGVGSDTIVTGSGRDTVFGDAGQIRFDAKGLVER 12915
Query: 325 IIVYDANEHKQDFL 338
D D +
Sbjct: 12916 AESLDTAIGGDDAI 12929
Score = 40.5 bits (93), Expect = 0.94, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG GND + + +NV +G+D G D ++ ++ DA
Sbjct: 11825 VGFGGNDTIDVGAGDNVVIAGAGSDAVTALGGNDVILGDGGYAEFEAG-LRALVVSTDAA 11883
Query: 332 EHKQDFLS 339
D L+
Sbjct: 11884 GAGADRLA 11891
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 54/220 (24%), Gaps = 48/220 (21%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIG 254
G +LG N Y + GDD + L IDL S+
Sbjct: 9132 GPNTITLGKNTYSTGAMN--------LIGGAGDDTVTLDGTYTLDALTIDL--GGGSNSL 9181
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDV--VIGNSANNVFFESSG---ND------------- 296
T+ I G SG D + G A ++G ND
Sbjct: 9182 TAAGLYTVGGALAIR---GGSGRDTLDLQGTYAAGSMEINAGDGQNDITLTGTYRIANAF 9238
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID---- 352
G SG DT ++ + A D +R +
Sbjct: 9239 TVRGGSGNDTLL------DFRTGGGAASPTNITAGSLSIDLGDGTNTVRLSGTYATPTGA 9292
Query: 353 ------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ N YTA + G + +
Sbjct: 9293 ITIRTGAGNDTFDLQGSYTARALSVEAGAGTNDLTLTGRY 9332
Score = 40.1 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 12/140 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G LG+N Y + F T G+D ++ G N + + + + G
Sbjct: 12203 GGNDVLLGDNGYALFEAGVRVEFASTDTTDAGNDRIE---AGDGDNLVLGGSGGDTLVTG 12259
Query: 256 YEKNMTIAQHTVIESVVG-----SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ + + ++ +G S D A + +G DV G G DT
Sbjct: 12260 KGADIMLGDNGLVRFELGLRALVQSSRD----GGARDSITSGAGADVVLGGLGADTIDAG 12315
Query: 311 APSYLYKIYRFENAIIVYDA 330
I ++ + +DA
Sbjct: 12316 RDDAESDIVLGDDGRLTFDA 12335
Score = 40.1 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 46/136 (33%), Gaps = 11/136 (8%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTV--IESVVGS-SGNDVVIGNSANNVFFESSGNDVFDG 300
+ T S + I G + A + IE+ + G D ++ +NV F G D
Sbjct: 11444 IRTGSGADVILGDNGSAVFADGVLVSIETTDSTFGGGDRIVAGEGDNVVFGGVGADDITA 11503
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G D + F ++V A +++ ++ + +R D +
Sbjct: 11504 GAGRDVILG-----DDGLATFAQGVLVRAATKNES--VAGDDTIRAGDGDNVVLGGSGND 11556
Query: 361 ILEYTASYEDLIQVIG 376
+ + + G
Sbjct: 11557 TITTGIGADIVFGDNG 11572
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 55/210 (26%), Gaps = 25/210 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDS--------GGDDLLDLTLIGGVKNYIDLNT 247
GA + +LG + + F+ + + GGDD + T G I L
Sbjct: 11022 GADRITLGQGTQVVLGDSGSATFVDGVIATILSVATEIGGDDTITAT---GGDTTI-LGG 11077
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSS------------GNDVVIGNSANNVFFESSGN 295
+I N I + + G+D++ + +G
Sbjct: 11078 AGSDTIKVGAGNHVILGDSGRAAFRNGRAQRIESITPEVGGDDIIEAEDGESRIIGGAGA 11137
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSV 354
D +G + + + A + + +RF +
Sbjct: 11138 DRITTGAGNHVILGDSGEADFTVTATGAVTTSVLARIASTATAIGGADTIRFGAGSNVVL 11197
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++ G F++
Sbjct: 11198 GGAGGDTITGADRGAVILGDNGIVTFDAAG 11227
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 30/104 (28%), Gaps = 7/104 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND + +N+ +G D SG D FE + V A
Sbjct: 12000 GIGGNDDIRVGGGDNLIIGGTGADTVTALSGSDVIIGDNGYA-----VFEAGVRVEFAAT 12054
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
D +R+ D + + + ++ G
Sbjct: 12055 DVSD--GGNDRIEAGDGDNLVLGGSGSDTITTGKGADIVLGDNG 12096
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 35/138 (25%), Gaps = 16/138 (11%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + P + G D + T +GG + G A
Sbjct: 13322 DTGIGGDDTIAAGPGDNLVVAGVGADTV--TTLGGADIVL-----------GDNGAAVFA 13368
Query: 264 QH---TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+V + G D ++ +N+ D +G D + Y
Sbjct: 13369 GGLRVSVASTAPADGGKDTLVLGDGDNLAIGGVDADAITTGNGADVILGDFGAVTYDAAG 13428
Query: 321 FENAIIVYDANEHKQDFL 338
I+ + D +
Sbjct: 13429 LLKQILSTETGLGGDDTI 13446
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 15/145 (10%)
Query: 226 GGDDLL-----DLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQH-TVIESVVGS-SGN 277
GG+D + D T++GG I++ + +G + + A IES+ G+
Sbjct: 10832 GGNDTITSVEGDTTILGGAGADTIEVGAGNHVILGDSGRALFDAGRLASIESIDSGIGGD 10891
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV+ N +G D G+ + S ++ R V
Sbjct: 10892 DVIGAKDGNATVIGGAGADRITLGKGMQVVLGDSGSATFENGRIATVTSVAT-------E 10944
Query: 338 LSDVERLRFADQCIDSVNVKQRSIL 362
+ + + +D + +
Sbjct: 10945 IGGGDTITASDGDTTILGGAGADGI 10969
Score = 38.6 bits (88), Expect = 4.0, Method: Composition-based stats.
Identities = 11/111 (9%), Positives = 32/111 (28%), Gaps = 9/111 (8%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI-- 268
TI + G++++ + G + I + + + + + V+
Sbjct: 10641 STHTGVGGADTIIAADGNNVI---IGGFGADTI--TAGAGNHVILGDNGEAVFAGGVLAS 10695
Query: 269 --ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + G+D + + +G D +G +
Sbjct: 10696 LRSTAGATGGDDTITARDGDTTIIGGAGKDGIAVGAGTHVILGDTGEARFT 10746
Score = 38.2 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 44/136 (32%), Gaps = 17/136 (12%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+++ + T+ G D + L G D + ++ +N I
Sbjct: 10890 GDDVIGAKDGNA------TVIGGAGADRITL-GKGMQVVLGDSGSATF-------ENGRI 10935
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A T + + +G D + + + +G D G + ++++ +
Sbjct: 10936 ATVTSVATEIGGG--DTITASDGDTTILGGAGADGIAVGVGNHVILGDSGKAVFRVGQLV 10993
Query: 323 NAIIVYDANEHKQDFL 338
+ + D D +
Sbjct: 10994 SVESI-DPGIGGDDAI 11008
Score = 37.4 bits (85), Expect = 9.1, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 28/103 (27%), Gaps = 3/103 (2%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ + G ND + ++ G+D G T + Y +
Sbjct: 12629 ILSTETGLGANDTIASGDGSDTILGGFGSDAITAGDGAKTVLGDSGQLDYAAGVLAQ-VQ 12687
Query: 327 VYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTAS 367
D + + +L D+V + + +
Sbjct: 12688 TLTPMIGAADTIRLGNGRKLVLGGAGGDTVEGQAGDAIVLGDA 12730
>gi|17548515|ref|NP_521855.1| putative hemolysin-type calcium-binding protein [Ralstonia
solanacearum GMI1000]
gi|17430762|emb|CAD17445.1| putative hemolysin-type calcium-binding protein [Ralstonia
solanacearum GMI1000]
Length = 589
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 28/139 (20%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD------LLDLTLIGGVKNYIDLNT 247
IYG+ G++I GG D LD L+G V L+
Sbjct: 262 IYGSN---SGDSIEGF-------------VTPGGVDLNKDKYNLDGWLLGEV-----LDL 300
Query: 248 ESWSSIGGY-EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S++ Y + + + +VG+ ND + G ++ +GND G G D
Sbjct: 301 GLNSNVYAYLQNGVAYVAGGGNDKIVGTDRNDALYGGDGDDTLIGGAGNDTLVGGKGFDA 360
Query: 307 FFYYAPSYLYKIYRFENAI 325
+ A S + + +
Sbjct: 361 YVIDAQSGSDAMIDEDGSG 379
>gi|126464829|ref|YP_001041805.1| hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
gi|126106644|gb|ABN79169.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
Length = 313
Score = 60.9 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 55/182 (30%), Gaps = 22/182 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG---------VKNYIDLNTESW 250
G GN+ ++I +Y G D LDL+ D E +
Sbjct: 82 GQAGNDTFRIRGVDLADD----VYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPF 137
Query: 251 SSIGGYEKNMTI--AQHTVI------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ I A+ V+ E++ G GND + G +V G D G +
Sbjct: 138 GPYVVKSIEIVIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGT 197
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D A + ++E ++V A +R FA +
Sbjct: 198 GNDLLLGGAGNDRLD-GQWERDVLVGGAGNDILIGGGGADRFVFAGNFGRDRIRDFSPDM 256
Query: 363 EY 364
Sbjct: 257 AG 258
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + +VG GND + G + + +G+D+ DG D + A +
Sbjct: 28 GTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGNGDDLLDGGFYHDACYGQAGND 87
Query: 315 LYKIYRFENAIIVYDANEHKQDFL 338
++I + A VY D L
Sbjct: 88 TFRIRGVDLADDVYGGA--GTDTL 109
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + T + ++G +GND + G +V +GND+ G G D F +
Sbjct: 184 LRGMEGADALFGGTGNDLLLGGAGNDRLDGQWERDVLVGGAGNDILIGGGGADRFVFAGN 243
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+I F + + ++
Sbjct: 244 FGRDRIRDFSPDMAGEWIDLRGVGAITGF 272
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 5/104 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+AQ + ++ G+ GND++ G + GND +G G+D + L +
Sbjct: 17 LAQSALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGNGDDLLDGGFY 76
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+A + D + + AD + YT
Sbjct: 77 HDACY----GQAGNDTFR-IRGVDLADDVYGGAGTDTLDLSGYT 115
>gi|44843529|gb|AAR11447.1| matrix metalloproteinase [Globodera rostochiensis]
Length = 588
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNA------QEVARWALGEWSKVVDLTFEET--SI 75
++ P++ L +++ P +E+ A W V+ + F ET +
Sbjct: 146 TDDGYTGTPEIWERSTLFWNLNSTAPQQFTRQEMKELIAQAFHAWEIVIKIDFLETGNAD 205
Query: 76 HSDIKFISSNNG---------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGT-I 119
H+ I F ++ V + + +N D+ +G
Sbjct: 206 HAQIIFSFDSDRSKKAAKNDEDEKTGLAVAKASSPPKAHISLNADEKWSTFQTQEEGKLD 265
Query: 120 LSHNALHEIGHALGLMHPGSYN 141
+ LHEIGHALGL H G N
Sbjct: 266 IFLVLLHEIGHALGLRHSGDEN 287
>gi|1524027|emb|CAA63849.1| EHEC-hemolysin [Escherichia coli]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFES 382
D LS + L + +IL + L I
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 RQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
>gi|326388709|ref|ZP_08210302.1| calcium-binding protein [Novosphingobium nitrogenifigens DSM 19370]
gi|326206960|gb|EGD57784.1| calcium-binding protein [Novosphingobium nitrogenifigens DSM 19370]
Length = 361
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 10/113 (8%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I + + + G +G DV+I + N+ + +GND+ GS+G A +
Sbjct: 181 GMDGNDRIVAGSGADMLYGGNGADVLIAGAGNDTLYGGAGNDLLYGSTGTSVLKGGAGND 240
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + A+ D + FA + ++ +
Sbjct: 241 TLRAWTGHTAMTGGD----------GADTFVFALGNTGGSSPSTADVINDFSH 283
>gi|224162231|ref|XP_002338425.1| predicted protein [Populus trichocarpa]
gi|222872207|gb|EEF09338.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 13/98 (13%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI------------NFD 105
A +WS V LTF+E S + + + Y +I ++D
Sbjct: 178 AFKKWSDVSPLTFQEASDGASANIVIAFYRGDHGDGYPFDGPGKILAHAFSPENGRFHYD 237
Query: 106 KADVWRYGIGKGTILSH-NALHEIGHALGLMHPGSYNG 142
+ W I A+HEIGH LGL H N
Sbjct: 238 ADEKWSTNPAMDQIDLESVAVHEIGHLLGLAHSSDSNA 275
>gi|218886590|ref|YP_002435911.1| von Willebrand factor A [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757544|gb|ACL08443.1| von Willebrand factor type A [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 2478
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 10/143 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G E + TI + + + G GND++ GN+ ++ +GND G G D
Sbjct: 2300 YQGDENHNTINGTSGDDVIFGHGGNDIIHGNAGHDYLHGGAGNDFLYGEGGNDILVGGQG 2359
Query: 313 SYLYKIYRFENAII--VYDANEHKQDFLSDV--------ERLRFADQCIDSVNVKQRSIL 362
+ + D D ++D + LRFAD +D I
Sbjct: 2360 GDTLTGGTGADTFVWNAEDFTSGATDVVTDFKPGASGENDVLRFADVLLDHDGNSANGIS 2419
Query: 363 EYTASYEDLIQVIGQDVFESMKH 385
+ DL QV + + H
Sbjct: 2420 TSLIASGDLTQVGSSNDVQLTLH 2442
>gi|330877260|gb|EGH11409.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 238
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 8/140 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN + + + G+D + L + LNT + + GG +
Sbjct: 26 TGNTLDNLIYAGAGDNVMD---GRDGNDTVSY-LFATAGVTVALNTSAQQATGG--SGLD 79
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T E++ GS D + GN NV SGND G G D + +
Sbjct: 80 TLKGT--ENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGVGDDVLIGGSGADTLIGGTG 137
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+ + ++NE L D+
Sbjct: 138 ADRYVFNNSNETGLGGLRDI 157
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Query: 265 HTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ V+ +G GN+ +N+ + +G++V DG G DT Y + + +
Sbjct: 9 GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS 68
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A + D L E L + K ++L + + L +G DV
Sbjct: 69 AQQATGGS--GLDTLKGTENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGVGDDVL 123
>gi|303251069|ref|ZP_07337255.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|302650079|gb|EFL80249.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 1668
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 87/242 (35%), Gaps = 39/242 (16%)
Query: 142 GGYPVYGVDNDYENDSFLTS-------VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
GG + Y D++L S + Y +S D T +DI
Sbjct: 1108 GGEGNDTLKGSYGADTYLFSKGHGQDVIYEYSDSANSKSDID-----TLKFTDIN----- 1157
Query: 195 YGAPKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--DLNTESWS 251
Y K G+++ DS +++ Y+ + + I D +
Sbjct: 1158 YAEVKFRRVGDDLMLFGYHDTDSVTVKSFYN---HEYYQFEKLEFADRSITRDELGKQGM 1214
Query: 252 SIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G + + I +++VI+ +GND + G+ ++ +GND+ GS G DT+
Sbjct: 1215 ALFGTDGDDDINDWGRNSVID---AGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYL 1271
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ IY + ++ + D++ L+F D V ++ Y
Sbjct: 1272 FSKGHGQDVIYEYSDSA----------NSKRDIDTLKFTDVNYAEVKFRRVGYDLMLFGY 1321
Query: 369 ED 370
D
Sbjct: 1322 HD 1323
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D LD ++ + + G + +++VI+ +GND V G + ++
Sbjct: 1470 DKLDFADRSITRDELGKQGMALFGTDGDDNINDWGRNSVID---AGAGNDTVNGGNGDDT 1526
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
GND+ G G DT+ + +Y + + + D++ L+F D
Sbjct: 1527 LIGGKGNDILRGGYGADTYIFSKGHGQDIVYE----------DTNNDNRARDIDTLKFTD 1576
Query: 349 QCIDSV 354
+ +
Sbjct: 1577 INLSEL 1582
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 9/137 (6%)
Query: 242 YID-LNTESWSSIGGYEKNMTIA----QHTVI---ESVVGSSGNDVVIGNSANNVFFESS 293
YID + + N+TIA + + G N++++G+ +N S+
Sbjct: 1042 YIDYAKAQGFYENWATTSNLTIARLREAGVIFAESTDLKGDEKNNILLGSQKDNNLSGSA 1101
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D+ G G DT + Y + ++Y+ ++ SD++ L+F D
Sbjct: 1102 GDDLLIGGEGNDTLKGSYGADTYLFSKGHGQDVIYEYSDSAN-SKSDIDTLKFTDINYAE 1160
Query: 354 VNVKQRSILEYTASYED 370
V ++ Y D
Sbjct: 1161 VKFRRVGDDLMLFGYHD 1177
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 11/102 (10%)
Query: 270 SVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ GND + + +++ GND+ G G DT+ + +Y
Sbjct: 1361 HLYGTDGNDDIKDHADWDSILEGGKGNDILRGGYGADTYIFSKGHGQDIVYE-------- 1412
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + D++ L+F D V ++ Y D
Sbjct: 1413 --DTNNDNRARDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHD 1452
>gi|255558368|ref|XP_002520211.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
gi|223540703|gb|EEF42266.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
Length = 364
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 48/203 (23%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDIK--FISSNNG------------YV 89
+L + V A WS V+ + F ET + +DI+ F S ++G
Sbjct: 177 QLTEVEKSVFTRAFDRWSTVIPMNFTETESYNVADIRIGFFSGDHGDGEPFDGVLGTLAH 236
Query: 90 CTPRYDSRYFMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
R+ ++ + D+ I L A+HEIGH LGL H
Sbjct: 237 AFSPPSGRFHLDGEENWVVSGDISSSTISSAVDLESVAVHEIGHLLGLGHSSVEEA---- 292
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+M +P + DI +Q +YG+ G++
Sbjct: 293 ---------------IMYPTIPSRTRK-------IELANDDIQGIQYLYGSNPNFNGSSS 330
Query: 207 YKIEVQQKDSPFIQ---TIYDSG 226
+Q++++ +++ G
Sbjct: 331 STPSIQERETSGAYHARSLWALG 353
>gi|78355641|ref|YP_387090.1| von Willebrand factor, type A [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218046|gb|ABB37395.1| von Willebrand factor, type A [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 686
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 6/149 (4%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
YI N E+ +S Y + T+ + + G SGNDV++G + N++ GND +G
Sbjct: 523 YIRDNHEALASGSRYGGDDTLDGGAGDDIMYGQSGNDVLLGGAGNDILVGGPGNDTLEGG 582
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----DFLSDV--ERLRFADQCIDSVN 355
+G DTF ++ + I+ YD + D LS V + + I S
Sbjct: 583 TGADTFMWHNGDQGTVTTPAHDHIMDYDTTQGDSLDLRDLLSGVSSDSNLHDNITISSDG 642
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + ++Q I ++
Sbjct: 643 TDTTISIHADGAPAQVVQEITLHGVDATS 671
>gi|213424472|pdb|3F15|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
(S)-N-(2,3-Dihydroxypropyl)-4-
Methoxy-N-(2-Nitroso-2-Oxoethyl)benzenesulfonamide
gi|213424473|pdb|3F16|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
(R)-N-(3-Hydroxy-1-Nitroso-1-
Oxopropan-2-Yl)-4-Methoxybenzenesulfonamide
gi|213424527|pdb|3F17|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor N-(2-Nitroso-2-Oxoethyl)
Biphenyl-4-Sulfonamide
gi|213424536|pdb|3F18|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
4-Fluoro-N-(2-Hydroxyethyl)-N-
(2-Nitroso-2-Oxoethyl)benzenesulfonamide
gi|213424542|pdb|3F19|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor 4-Fluoro-N-(2-Nitroso-2-
Oxoethyl)benzenesulfonamide
gi|213424543|pdb|3F1A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor N-(2-Nitroso-2-Oxoethyl)
Benzenesulfonamide
gi|237823818|pdb|3EHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor (R)-2-(Biphenyl-4-
Ylsulfonamido)-4-Methylpentanoic Acid
gi|237823819|pdb|3EHY|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor (R)-2-(4-
Methoxyphenylsulfonamido)propanoic Acid
gi|295982407|pdb|3LKA|A Chain A, Catalytic Domain Of Human Mmp-12 Complexed With Hydroxamic
Acid And Paramethoxy-Sulfonyl Amide
gi|301598833|pdb|3NX7|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(N-(2-Hydroxyethyl)4-
Methoxyphenylsulfonamido)acetamide
gi|308198526|pdb|3LK8|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
Paramethoxy-Sulfonyl-Glycine Hydroxamate
gi|311772155|pdb|3N2U|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(4-Methoxy-N(2-(3,4,5-Trihydroxy-6-
(Hydroxymethyl)tetrahydro-2h-Pyran-2-
Yloxy)ethyl)phenylsulfonamido) Acetamide
gi|311772156|pdb|3N2V|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(N-Hydroxyethyl)biphenyl-4-
Ylsulfonamido)acetamide
Length = 158
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 58/189 (30%), Gaps = 49/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W ++I Y+ + T D+ R A WS V L F +
Sbjct: 4 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 56
Query: 74 ----SIHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEI 128
H D G + + +FD+ + W G GT L A+HEI
Sbjct: 57 VFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 115
Query: 129 GHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y Y + A D
Sbjct: 116 GHSLGLGHSSDPKAVMFPTYK----------------YVDINTFRLSA----------DD 149
Query: 188 IVAVQKIYG 196
I +Q +YG
Sbjct: 150 IRGIQSLYG 158
>gi|82697911|gb|ABB88990.1| putative iron-regulated protein [uncultured crenarchaeote]
Length = 168
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 29/81 (35%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI + + V G +D++ GNS N+ +GND +G G D
Sbjct: 65 LFGSGGNDTIEGGSGNDFVQGDIADDIINGNSGNDTVQGGAGNDQVNGDDGNDLVIGSFA 124
Query: 313 SYLYKIYRFENAIIVYDANEH 333
+ I +
Sbjct: 125 NSSMSIKDLAADTLTCGTGND 145
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 9/100 (9%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--------- 295
L S I G + + + + + G G D + G+ N+ SGN
Sbjct: 30 LKNVSAVDIEGNDHDNVLYGSMGNDKIFGKGGGDRLFGSGGNDTIEGGSGNDFVQGDIAD 89
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D+ +G+SG DT A + + +I AN
Sbjct: 90 DIINGNSGNDTVQGGAGNDQVNGDDGNDLVIGSFANSSMS 129
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 37/128 (28%), Gaps = 32/128 (25%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
I+ GG D L + I G N + + + G+SGN
Sbjct: 52 GNDKIFGKGGGDRLFGSGGNDT-------------IEGGSGNDFVQGDIADDIINGNSGN 98
Query: 278 DVVIGNSANNVFFESSGNDVFDG-------------------SSGLDTFFYYAPSYLYKI 318
D V G + N+ GND+ G +G DT F
Sbjct: 99 DTVQGGAGNDQVNGDDGNDLVIGSFANSSMSIKDLAADTLTCGTGNDTAFINISDNDTAS 158
Query: 319 YRFENAII 326
E II
Sbjct: 159 EDCETVII 166
Score = 42.8 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ ++V+ G+ N+ F G D GS G DT + + + ++ I N+
Sbjct: 40 GNDHDNVLYGSMGNDKIFGKGGGDRLFGSGGNDTIEGGSGNDFVQGDIADDIINGNSGND 99
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
Q + + + + S+ + + L G D
Sbjct: 100 TVQGGAGNDQVNGDDGNDLVIGSFANSSMSIKDLAADTLTCGTGND 145
>gi|329848198|ref|ZP_08263226.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843261|gb|EGF92830.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 502
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 46/138 (33%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + N I T +++ G G+D G + +++ G+D G +G DT+ A
Sbjct: 50 SIAGEDGNDQIYGGTGNDTLNGGDGDDTAWGGTGHDMLNGGFGDDSLTGGTGNDTYVVNA 109
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + A +V + + I+ + L S L
Sbjct: 110 VGDVIDEQSGQGADVVQASITFSLAGTYLEHLVLIGIANINGTGSASANSLTGNNSSNLL 169
Query: 372 IQVIGQDVFESMKHFYEF 389
G D + +
Sbjct: 170 DGGDGSDTLTGAAGWDTY 187
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 63/193 (32%), Gaps = 11/193 (5%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D+ + +I DL S G T + G+S ++ +IG
Sbjct: 184 WDTYVVNTASDVVIEVAGQGDDLVQAGVSYTLGDYVERMTLTGTGDINATGNSAHNQLIG 243
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-------Q 335
NS NNV ++G D G G DT++ E + Y + +
Sbjct: 244 NSGNNVLDGATGGDYLTGGLGNDTYYLDHSGDKIFELAGEGVDLAYSSVSYVLVGTVVEN 303
Query: 336 DFLSDVERLRFADQCIDSVNVKQR--SILEYTASYEDLIQVIGQDV--FESMKHFYEFGL 391
L+ L + + ++L+ + L +G D +S
Sbjct: 304 LILTGTADLNATGNGVGNKLTGNSGNNVLDGLVGNDTLTGGLGDDTYYVQSSGDKVVEAS 363
Query: 392 SEGRDITFDSYLY 404
EG D+ + S Y
Sbjct: 364 GEGYDVVYASATY 376
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 64/184 (34%), Gaps = 18/184 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G LGN+ Y + D GD + +L G Y ++ S+ +G +
Sbjct: 260 TGGLGNDTYYL--------------DHSGDKIFELAGEGVDLAY---SSVSYVLVGTVVE 302
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ I T + G+ + + GNS NNV GND G G DT++ +
Sbjct: 303 NL-ILTGTADLNATGNGVGNKLTGNSGNNVLDGLVGNDTLTGGLGDDTYYVQSSGDKVVE 361
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E +VY + + E I++ ++L L + G D
Sbjct: 362 ASGEGYDVVYASATYTLTGRYAEELRLTGAADIEASGNSVGNVLVGNDGDNVLNGLGGND 421
Query: 379 VFES 382
Sbjct: 422 SLTG 425
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 64/212 (30%), Gaps = 22/212 (10%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKN----------YIDLN 246
+ IY T + G D+L D +L GG N ID
Sbjct: 58 DQIYGGTGNDTLNGGDGDDTAWGGTGHDMLNGGFGDDSLTGGTGNDTYVVNAVGDVIDEQ 117
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + ++A + V+ N G+++ N ++ +++ DG G DT
Sbjct: 118 SGQGADVVQASITFSLAGTYLEHLVLIGIANINGTGSASANSLTGNNSSNLLDGGDGSDT 177
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-EYT 365
A Y + +V + D + D I
Sbjct: 178 LTGAAGWDTY--VVNTASDVVIEVAGQGDDLVQAGVSYTLGDYVERMTLTGTGDINATGN 235
Query: 366 ASYEDLIQVIGQDVFESM--KHFYEFGLSEGR 395
+++ LI G +V + + GL
Sbjct: 236 SAHNQLIGNSGNNVLDGATGGDYLTGGLGNDT 267
>gi|157688258|gb|ABQ02446.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D LS + L + +IL + L G D+ + +
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 385 --HFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 RQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
>gi|88807511|ref|ZP_01123023.1| hypothetical protein WH7805_13208 [Synechococcus sp. WH 7805]
gi|88788725|gb|EAR19880.1| hypothetical protein WH7805_13208 [Synechococcus sp. WH 7805]
Length = 260
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 75/204 (36%), Gaps = 27/204 (13%)
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
M+Y +P++ + + + + ++ D ++++G+ +L N ++ + I
Sbjct: 1 MTYVIPENEQANFNNPFIS--LLPD-ELDRQLFGSNDINLEGN--DLDNILIGNNGNNVI 55
Query: 223 YDSGGDDLLDLTLIGGV-------KNYIDLNTESWSSI------GGYEKNM------TIA 263
GDD + + N ++L E + +N+ IA
Sbjct: 56 DGGFGDDRMAGGRGNDIYFVMDKGDNVVELPNEGLDQVVTSRSKYKLPQNVEGLAFDFIA 115
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+V +G+S +++++GN N GND+ G G D +K + +
Sbjct: 116 FDSV---GIGNSSDNILLGNDFKNKLKGGGGNDLLVGLGGKDKLTGGKGFDEFKFFSTTD 172
Query: 324 AIIVYDANEHKQDFLSDVERLRFA 347
+ + DF + + +
Sbjct: 173 SGTTKKTRDVITDFDIQFDFIDIS 196
>gi|332186074|ref|ZP_08387820.1| hemolysin-type calcium-binding repeat family protein [Sphingomonas
sp. S17]
gi|332013889|gb|EGI55948.1| hemolysin-type calcium-binding repeat family protein [Sphingomonas
sp. S17]
Length = 623
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 13/130 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D+ + + + S + G N T+ + + G SG+D + G N+ +
Sbjct: 463 DIAYTAARQGTAGADVLTGSRVFGLAGNDTLTGTNGSDLLYGGSGDDRLDGRGGNDSLYG 522
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND G G D L+ + + +E R +D
Sbjct: 523 GEGNDWLTGGGGRDLLNGGLGDDLFVVDASLPGHVT-------------IEDFRLSDVER 569
Query: 352 DSVNVKQRSI 361
D + +
Sbjct: 570 DKIQITNSGF 579
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 251 SSIGGYEKNMTIAQHTVI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S G+ + + + + G+ GND + G ++V +G + +G G DT
Sbjct: 334 SDRHGHVGDSAFLIGSQFGDRLRGNVGNDYIDGAGGDDVIRPGTGQNRIEGGLGTDTLEL 393
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+ + R + + + + +S VE++ F D +
Sbjct: 394 SGSMRDWSVSRLADGTTAFFSKSFGLNIVSGVEKVTFLDTGL 435
>gi|163736686|ref|ZP_02144105.1| bifunctional 2',3'-cyclic nucleotide
2'-phosphodiesterase/3'-nucleotidase periplasmic
precursor protein [Phaeobacter gallaeciensis BS107]
gi|161390556|gb|EDQ14906.1| bifunctional 2',3'-cyclic nucleotide
2'-phosphodiesterase/3'-nucleotidase periplasmic
precursor protein [Phaeobacter gallaeciensis BS107]
Length = 422
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +++ G +GND +IG + N+ F GND+ G G DTF + +
Sbjct: 301 GQNGDDKLNGSHGADTIRGGAGNDTLIGGNGNDKLFGQQGNDLLIGGDGADTFAFGSNHG 360
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+I FE + K D +S E L D
Sbjct: 361 RARIRDFEVGV-------DKIDIISGAESLSQID 387
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 20/157 (12%)
Query: 207 YKIEVQQKDSPFIQTIYD------SGGDDLLDL-------TLIGGVKNYIDLNTESWSSI 253
Y + DSP + +GG+ LD+ TL+G V I T + I
Sbjct: 213 YVKDFGGYDSPTADALIAFWQDRKAGGNAPLDMGEPEVGETLLGTVSRDILDGTGADDLI 272
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N +A + + G G D +IG + ++ S G D G +G DT +
Sbjct: 273 SGRGGNDRLAGRAGDDDLRGGGGRDRLIGQNGDDKLNGSHGADTIRGGAGNDTLIGGNGN 332
Query: 314 Y-------LYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + A + H + + D E
Sbjct: 333 DKLFGQQGNDLLIGGDGADTFAFGSNHGRARIRDFEV 369
>gi|119489127|ref|ZP_01622033.1| hypothetical protein L8106_22531 [Lyngbya sp. PCC 8106]
gi|119454876|gb|EAW36020.1| hypothetical protein L8106_22531 [Lyngbya sp. PCC 8106]
Length = 263
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 4/129 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
Q+ + F + I+ GDD + + + + I N GG N TI
Sbjct: 22 FVTSQQATDFPEGIFMLEGDDTVTGSSL---NDLIYGNQGEDLIDGGLGGNDTIYGGQGK 78
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + +SG+++++GN N++ +GND G G D + I+
Sbjct: 79 DLLGSTSGDNILLGNFDNDLLTGGAGNDQLFGGQGDD-LIGGEGGGNDTLSGDLGRDIIL 137
Query: 329 DANEHKQDF 337
N D
Sbjct: 138 GRNTLFSDT 146
>gi|119488759|ref|ZP_01621768.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119455182|gb|EAW36323.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 1131
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 23/190 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ I+ GDD++ + +GG + +I G E N T+ + ++
Sbjct: 10 NDNLLGTGEADVIFALTGDDII--SGLGGGDSLFGFRGND--TINGNEGNDTLFGNQNLD 65
Query: 270 SVVGSSGNDVVIG---------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++G SG+D + G + F + G+D+ G +G D Y + I
Sbjct: 66 LLIGDSGDDWLFGGKEADIIEDGEGEDQLFGNLGDDLLRGGAGNDQ-RYGGKANDTVIGG 124
Query: 321 FENAIIVYDANEH---KQDF------LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N + D D + +++ L + V Q + + D
Sbjct: 125 TGNDQVFGDRGNDILWGIDVDAINPGIDEIDTLTGGSEPDIFVLGDQSRLYYIGSGNNDF 184
Query: 372 IQVIGQDVFE 381
+ +V E
Sbjct: 185 ALITDFNVLE 194
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 6/140 (4%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L T I + I+ +S+ G GND + GN N+ F + D+ G SG
Sbjct: 14 LGTGEADVIFALTGDDIISGLGGGDSLFGFRGNDTINGNEGNDTLFGNQNLDLLIGDSGD 73
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSIL 362
D F + + I E ++ D L R+ + D+V +
Sbjct: 74 DWLFGGKEADI--IEDGEGEDQLF--GNLGDDLLRGGAGNDQRYGGKANDTVIGGTGNDQ 129
Query: 363 EYTASYEDLIQVIGQDVFES 382
+ D++ I D
Sbjct: 130 VFGDRGNDILWGIDVDAINP 149
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 54/162 (33%), Gaps = 25/162 (15%)
Query: 203 GNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI------------ 243
G++++ + T++ + DLL D L GG + I
Sbjct: 37 GDSLFGFRGNDTINGNEGNDTLFGNQNLDLLIGDSGDDWLFGGKEADIIEDGEGEDQLFG 96
Query: 244 -----DLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
L + + G + N T+ T + V G GND++ G + + D
Sbjct: 97 NLGDDLLRGGAGNDQRYGGKANDTVIGGTGNDQVFGDRGNDILWGIDVDAINPGIDEIDT 156
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
G S D F S LY I N + +D +S
Sbjct: 157 LTGGSEPDIFVLGDQSRLYYIGSGNNDFALITDFNVLEDQIS 198
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 42/133 (31%), Gaps = 16/133 (12%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I ++++G+ DV+ + +++ G D G G DT +
Sbjct: 2 IEINGTPGNDNLLGTGEADVIFALTGDDIISGLGGGDSLFGFRGNDTINGNEGNDTL--- 58
Query: 320 RFENAIIVYDANEHKQDFLSD-----------VERLRFADQCIDSVNVKQRSILEYTA-S 367
F N + + D+L E F + D + + Y +
Sbjct: 59 -FGNQNLDLLIGDSGDDWLFGGKEADIIEDGEGEDQLFGNLGDDLLRGGAGNDQRYGGKA 117
Query: 368 YEDLIQVIGQDVF 380
+ +I G D
Sbjct: 118 NDTVIGGTGNDQV 130
>gi|15965753|ref|NP_386106.1| putative hemolysin-type calcium-binding protein [Sinorhizobium
meliloti 1021]
gi|15075022|emb|CAC46579.1| Hemolysin-type calcium-binding protein [Sinorhizobium meliloti
1021]
Length = 548
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 7/125 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDV 279
I GG D L + + D +T + + I + ++ + +S+ +G+D
Sbjct: 368 IDGGGGSDTLRV-VDPLPGTNFDASTGTLGTTLIFTNIERFELSGGSGNDSIRTLAGDDQ 426
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY----KIYRFENAIIVYDANEHKQ 335
+ GN N+ +GNDV G +G D A + + + F + D +
Sbjct: 427 LAGNDGNDRLDGGAGNDVLWGGAGDDVMTGGAGADTFLWSSDTFSFAGVDRITDFDADGG 486
Query: 336 DFLSD 340
D L
Sbjct: 487 DLLRF 491
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Query: 245 LNTESWSSIGGY--EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
L + SS+ + + + +A + + V SG+D + G + +++ + GNDV G
Sbjct: 272 LIAGNLSSLTAHMGDGDNYVAGGSGRDYVASGSGDDALYGGAGDDILISAGGNDVLAGGD 331
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D + S+ Y D + V F D S ++ L
Sbjct: 332 GNDEIYDGGTSF--------GDGETYIDGGAGDDLIQVVAPSGFIDGGGGSDTLRVVDPL 383
Query: 363 EYT 365
T
Sbjct: 384 PGT 386
>gi|260751837|ref|YP_003237751.1| hemolysin A [Escherichia coli O111:H- str. 11128]
gi|257767829|dbj|BAI39321.1| hemolysin A [Escherichia coli O111:H- str. 11128]
gi|323181118|gb|EFZ66652.1| hemolysin, chromosomal [Escherichia coli 1180]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D LS + L + +IL + L G D+ + +
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 385 --HFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/301 (17%), Positives = 93/301 (30%), Gaps = 46/301 (15%)
Query: 68 LTFEETSI-HSDIKFIS---SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+ F E H + IS + V + S F D + +GK TI
Sbjct: 583 IQFVEKDNKHYQARMISELGDKDDVVYSGAGSSEVFAGEGHDTVSYNKTDVGKLTID--- 639
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A G PG Y +YG + V S + + F +
Sbjct: 640 -------ATGASKPGEYIVSKNMYGDVKVLQEVVKEQEV-SVGKRTEKIQYRDFEFRTGG 691
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ D+ + ++ + G K + + K F + + G+D ++ G + Y
Sbjct: 692 IPYDV--IDNLHSVEELIGG----KHDDEFKGGKFNDIFHGADGNDYIEG-NYGNDRLYG 744
Query: 244 DLNTESWSS------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG--- 294
D + S + G N ++ + G SGND + + A N+ +G
Sbjct: 745 DDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDK 804
Query: 295 ---------------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
ND +G G D + Y + I ++ D ++
Sbjct: 805 LYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLSDISFDDIA 864
Query: 340 D 340
Sbjct: 865 F 865
>gi|226200962|ref|YP_002756566.1| hemolysin transport protein [Escherichia coli]
gi|219881591|gb|ACL51961.1| hemolysin transport protein [Escherichia coli]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFES 382
D LS + L + +IL + L I
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 RQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
>gi|260763804|ref|YP_003237843.1| hemolysin A [Escherichia coli O26:H11 str. 11368]
gi|284000230|ref|YP_003377917.1| hemolysin A [Escherichia coli O26:H-]
gi|157688246|gb|ABQ02440.1| enterohemolysin [Escherichia coli]
gi|238801609|gb|ACR56507.1| hemolysin A [Escherichia coli]
gi|257757229|dbj|BAI28730.1| hemolysin A [Escherichia coli O26:H11 str. 11368]
gi|283445170|gb|ADB20514.1| hemolysin A [Escherichia coli O26:H-]
gi|325699397|gb|ADZ45128.1| hemolysin A [Escherichia coli]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFES 382
D LS + L + +IL + L I
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 RQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
>gi|126740772|ref|ZP_01756457.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126718068|gb|EBA14785.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 378
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 55/182 (30%), Gaps = 17/182 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
S G D L T G + N ++ GY + +I + + G GND ++G
Sbjct: 110 SDGADTLVGTGEGEEISADSGNDQA----HGYGGDDSIDGGEGRDVLHGGEGNDTLLGTV 165
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDV 341
+++ G+DV G DT F + + D L S
Sbjct: 166 GDDLLHGEEGSDVLSGGDDEDTLFGHFGADTL----LGGEGNDSAHGGQDDDLLMGGSGA 221
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ L D L + + E+ + + G EG D F
Sbjct: 222 DALHGNDDDDTLTGGSGEDTLFGGTGNDFIWGA----EEEAEQDYLNGG--EGDDTLFAG 275
Query: 402 YL 403
Sbjct: 276 EG 277
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 1/110 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-YAPS 313
G E N + + ++G SG D + GN ++ SG D G +G D + +
Sbjct: 199 GGEGNDSAHGGQDDDLLMGGSGADALHGNDDDDTLTGGSGEDTLFGGTGNDFIWGAEEEA 258
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ E ++ +++ F DQ + V+
Sbjct: 259 EQDYLNGGEGDDTLFAGEGDVVTAGEGADQIWFEDQGENGQAVELVDFNS 308
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 55/179 (30%), Gaps = 5/179 (2%)
Query: 226 GGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
GGDD +D L GG N L T + G E + ++ +++ G G D +
Sbjct: 138 GGDDSIDGGEGRDVLHGGEGNDTLLGTVGDDLLHGEEGSDVLSGGDDEDTLFGHFGADTL 197
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G N+ +D+ G SG D E+ + N+ +
Sbjct: 198 LGGEGNDSAHGGQDDDLLMGGSGADALHGNDDDDTLTGGSGEDTLFGGTGNDFIWGAEEE 257
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
E+ D + D I Q +F +E + F
Sbjct: 258 AEQDYLNGGEGDDTLFAGEGDVVTAGEGADQIWFEDQGENGQAVELVDFNSAEDHLVVF 316
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 24/80 (30%), Gaps = 13/80 (16%)
Query: 273 GSSGNDVVIG---------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
GS G D ++G +S N+ G+D DG G D +
Sbjct: 109 GSDGADTLVGTGEGEEISADSGNDQAHGYGGDDSIDGGEGRDVLHGGEGNDTL----LGT 164
Query: 324 AIIVYDANEHKQDFLSDVER 343
E D LS +
Sbjct: 165 VGDDLLHGEEGSDVLSGGDD 184
>gi|4388764|emb|CAA56234.1| hemolysin [Escherichia coli]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 GQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 57/194 (29%), Gaps = 31/194 (15%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D LS D L+ +Y L G D
Sbjct: 759 QLFGGSGNDKLSG------GDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGID 812
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-----ITHGVKEGR---NPDA 439
EG D YL FG+D ++Y G K R + +
Sbjct: 813 LLDGGEGND-------YL------NGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLSDIS 859
Query: 440 FKALEYIASHEDLI 453
F + + DLI
Sbjct: 860 FDDIAFKRVGNDLI 873
>gi|163732496|ref|ZP_02139941.1| type I secretion target domain protein, putative [Roseobacter
litoralis Och 149]
gi|161393856|gb|EDQ18180.1| type I secretion target domain protein, putative [Roseobacter
litoralis Och 149]
Length = 982
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 32/88 (36%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + + + + G GNDV+ G + N+ + G+D+ G G D +
Sbjct: 828 SGGITMGGHDNLFGGDGNDYLKGGGGNDVLSGGAGNDTLYGDGGDDILSGGLGDDVLYGG 887
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL 338
A + + E + IV +
Sbjct: 888 AGENTFLVAASEGSDIVAGGASGWTQTI 915
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 30/112 (26%), Gaps = 4/112 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----YRFENAII 326
+ G +G+D +IG + + + +G+D G +G D + + +
Sbjct: 569 ISGGAGDDQLIGGAGDERLYGDAGDDTIKGGAGDDRLYGGDEVGADAVVLMHFEDVGGTS 628
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + V +Y D +
Sbjct: 629 ADSSGNARDGLYRGGATPGATGWDGTGTAVALDGTDDYVEVPPDSAYALDAG 680
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS--GLDTFFYY-----APSY 314
I+ + ++G +G++ + G++ ++ +G+D G G D +
Sbjct: 569 ISGGAGDDQLIGGAGDERLYGDAGDDTIKGGAGDDRLYGGDEVGADAVVLMHFEDVGGTS 628
Query: 315 LYKIYRFENAIIVYDANEHKQDF 337
+ + A +
Sbjct: 629 ADSSGNARDGLYRGGATPGATGW 651
>gi|114561623|ref|YP_749136.1| putative outer membrane adhesin like proteiin [Shewanella
frigidimarina NCIMB 400]
gi|114332916|gb|ABI70298.1| putative outer membrane adhesin like proteiin [Shewanella
frigidimarina NCIMB 400]
Length = 5787
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
Q+ + + G G+D++ G N+V + GNDV G G DT + + + +
Sbjct: 5611 QNDGNDILDGGIGDDILFGQGGNDVIYGGEGNDVLIGGLGNDTLIGGLGNDTFVWSKGDT 5670
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ +DF + + L +D + N + L+++ + I D S+
Sbjct: 5671 GT------DTIKDFEVNNDSLHISDLLQNEQNGDLDNYLDFSFNNGSTTISIDADHNGSI 5724
Query: 384 K 384
Sbjct: 5725 D 5725
>gi|328470467|gb|EGF41378.1| hypothetical protein VP10329_06702 [Vibrio parahaemolyticus 10329]
Length = 5227
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 22/179 (12%)
Query: 204 NNIYKIEVQQKDSPFIQTIY------DSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGY 256
+ ++ V+Q D T D D +D+++ N ID+++E+
Sbjct: 5020 DTLHIDNVRQGDHDITLTAVSTESNGDQAFSDPIDISINVTSNNRDIDVSSET------- 5072
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY------- 309
E N+ + I S++G +G+D +IG +++ G+D+ G G D F +
Sbjct: 5073 EDNLLLGSDRGI-SLIGGAGDDRIIGGDGDDILIGGLGSDILTGGGGNDIFKWTQDTVDE 5131
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A + E+ I + D D ++ ++ L Q S+ T +
Sbjct: 5132 GAVDTITDFTLNEDTIDLKDVIADLNDPMAGIDELLAHIQADYDATTDNVSLSITTDAN 5190
>gi|158258755|dbj|BAF85348.1| unnamed protein product [Homo sapiens]
Length = 467
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 56/320 (17%), Positives = 87/320 (27%), Gaps = 68/320 (21%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T ++ + + A WS L F S +DI
Sbjct: 108 WERTNLTYRIRNYTPQLSEAEV-------ERAIKDAFELWSVASPLIFTRISQGEADINI 160
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+N P + +FD + W L A HE
Sbjct: 161 AFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYN-LFLVAAHEF 219
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YP Y ++ S+ D
Sbjct: 220 GHSLGLAHSSDPGALMYPNYAF-----RETSNYSLP---------------------QDD 253
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNY--- 242
I +Q IYG + + S I G+ L D
Sbjct: 254 IDGIQAIYGLSSNPIQPTVPSTPKPCDPSLTFDAITTLRGEILFFKDRYFWRRHPQLQRV 313
Query: 243 -IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++ + W S+ T I++ D++ N ++ SG D+ G
Sbjct: 314 EMNFISLFWPSLP-----------TGIQAAYEDFDRDLIFLFKG-NQYWALSGYDILQGY 361
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
D Y PS + I
Sbjct: 362 P-KDISNYGFPSSVQAIDAA 380
>gi|156344403|ref|XP_001621173.1| hypothetical protein NEMVEDRAFT_v1g145780 [Nematostella vectensis]
gi|156206862|gb|EDO29073.1| predicted protein [Nematostella vectensis]
Length = 167
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 48/166 (28%), Gaps = 47/166 (28%)
Query: 57 WALGEWSKVVDLTFEETSIH---SDIKFISSNNGYVC------------------TPRYD 95
A +W+ V L F +DI G P +
Sbjct: 24 EAFSKWAAVTSLVFVRVPPTSRDADITIRFVEAGDHGDEKPFRKGITEQLVGHTFPPWNN 83
Query: 96 SRYFMEINFDKADVWR-YGIGKGTILSH-NALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ +I+F+ + G + A+HEIGH+LGL H G
Sbjct: 84 TGRSGDIHFNDDKYFSLPGYARAAYDFLWIAMHEIGHSLGLAHTGD-------------- 129
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
SVM + + DI +Q +YG K
Sbjct: 130 -----PFSVM-----YTTYTAYFYNRKRDLSADDIRGIQALYGKAK 165
>gi|9105546|gb|AAF83478.1|AE003910_14 hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1208
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 72/232 (31%), Gaps = 58/232 (25%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
SY+ + ++ + +YG+ + Y TI
Sbjct: 736 SYWSADNVLIGGTG-------------DDTLYGSAFA----DTYLFN----QGDGHDTII 774
Query: 224 DSGGDDLLDLT----------LIGGVKNYIDLNTESWS-------------SIGGYEKNM 260
+ GG D L L G +DL S + + +
Sbjct: 775 EQGGTDKLVFGEGIVAADVRLLRQGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQI 834
Query: 261 TIAQHTVIE---------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
A T+ + +G+SGND + G ++ +G+DV DG G + A
Sbjct: 835 VFADGTLWTPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGA 894
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + K+ + ++ D L FAD + + +I+E
Sbjct: 895 GNDVLKVSYWSADNVL--IGGTGDDTLYGS---AFADTYLFNQGDGHDTIIE 941
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 70/212 (33%), Gaps = 19/212 (8%)
Query: 113 GIGKGTILSHNALHEIGHALG----LMHPGSYNGGYPVYGVDNDYENDSFLTSV-MS-YF 166
G T + +H GH+ L+ P N Y ++ + S +S Y
Sbjct: 495 STGGETFTWNRVIHPDGHSEDVMSILLQPEQINSLMSAYASLKEFAYAGLVLSTRLSDYL 554
Query: 167 MPQD-SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ + +FG+ A+ + + + K ++ + ++ +
Sbjct: 555 SGLTLTYSNDAFGWDASALE---AKLDHTWQHNKTQALQDVMDLYRYGSNA------VAA 605
Query: 226 GGDDLLDL--TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G D +I D ++ + T + + G +G +++ G
Sbjct: 606 SGWKPFDALRHMIDRTAATPDGRQALAAAEITLVSG-SAEGSTAADLIFGDAGANILRGG 664
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ ++V G+D G G DT + A +
Sbjct: 665 AGDDVLSGGDGDDTLYGGDGNDTLYGDAGNDT 696
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 80/311 (25%), Gaps = 87/311 (27%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+GG ++ ND SY+ + ++ + +YG+
Sbjct: 882 DGGEGSNRLEGGAGNDVLKV---SYWSADNVLIGGTG-------------DDTLYGSAFA 925
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTESW 250
+ Y TI + GG D L L G +DL
Sbjct: 926 ----DTYLFN----QGDGHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVLDLGNGHD 977
Query: 251 S-------------SIGGYEKNMTIAQHTVIE---------SVVGSSGNDVVIGNSA--- 285
S + + + A T+ + +G+ GND + G
Sbjct: 978 SIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTPGNDTLKGWQGKDI 1037
Query: 286 ---------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIY 319
+N +GND V G +G DT + A + Y
Sbjct: 1038 LLGGDGDDVLDGGEGSNRLEGGAGNDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFN 1097
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + D L E L + + + +
Sbjct: 1098 KGDGHDTI--IEQSGTDKLVFGEGLHQKEARFTRSGDDLSLLFNGSEDQVTIAGWFNGSG 1155
Query: 380 FESMKHFYEFG 390
+ ++ G
Sbjct: 1156 HQVESLVFQDG 1166
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 32/134 (23%)
Query: 245 LNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDV------------------VIGNSA 285
L + + G + + T+ +++ G +GND + G
Sbjct: 661 LRGGAGDDVLSGGDGDDTLYGGDGNDTLYGDAGNDTLYGGGGNDLLLGGDGDDVLDGGEG 720
Query: 286 NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+N +G+D V G +G DT + A + Y + + + +
Sbjct: 721 SNRLEGGAGDDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFNQGDGHDTI--IEQGG 778
Query: 335 QDFLSDVERLRFAD 348
D L E + AD
Sbjct: 779 TDKLVFGEGIVAAD 792
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 13/125 (10%)
Query: 271 VVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAPSYL--YKIYRFENAII 326
++G +G+D + G++ + F + G+D SG D + + + R + +
Sbjct: 1076 LIGGTGDDTLYGSAFADTYLFNKGDGHDTIIEQSGTDKLVFGEGLHQKEARFTRSGDDLS 1135
Query: 327 VYDANEHKQDFLSD--------VERLRFADQCIDSVNV-KQRSILEYTASYEDLIQVIGQ 377
+ Q ++ VE L F D + S V + + + + + L +G
Sbjct: 1136 LLFNGSEDQVTIAGWFNGSGHQVESLVFQDGTVLSGEVERLIAAMALSPAATTLQASVGD 1195
Query: 378 DVFES 382
Sbjct: 1196 HKESP 1200
>gi|1805762|emb|CAA60042.1| EHEC-hlyA [Escherichia coli]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 GQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 57/194 (29%), Gaps = 31/194 (15%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D LS D L+ +Y L G D
Sbjct: 759 QLFGGSGNDKLSG------GDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGID 812
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-----ITHGVKEGR---NPDA 439
EG D YL FG+D ++Y G K R + +
Sbjct: 813 LLDGGEGND-------YL------NGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLSDIS 859
Query: 440 FKALEYIASHEDLI 453
F + + DLI
Sbjct: 860 FDDIAFKRVGNDLI 873
>gi|297666705|ref|XP_002811653.1| PREDICTED: matrix metalloproteinase-23-like [Pongo abelii]
Length = 390
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 27/146 (18%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNP-NAQEVARWALGEWSKVVDLTFEETS--I 75
R + +R+ LT LSF L+P + A WS V +F E +
Sbjct: 77 RRYTLTPARLRWDHFNLTYRILSFPRNLLSPRETRRALAAAFRMWSDVSPFSFREVAPEQ 136
Query: 76 HSDIKFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG-- 117
SD++ + T +F I+FD ++ W G +
Sbjct: 137 PSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSW 196
Query: 118 ------TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 197 KKGVWLTDLVHVAAHEIGHALGLMHS 222
>gi|119485710|ref|ZP_01619985.1| hypothetical protein L8106_25045 [Lyngbya sp. PCC 8106]
gi|119457035|gb|EAW38162.1| hypothetical protein L8106_25045 [Lyngbya sp. PCC 8106]
Length = 518
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 10/180 (5%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ ++ GG N + + ++ G N I + + ++G + +D +IG+S N+
Sbjct: 128 TYNDSMTGGTGNDSIFGEQGFDTLEGGNGNDFIRGGSGDDQILGENDDDNLIGDSGNDTI 187
Query: 290 FESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFLS--- 339
G+D G SG D+ S I+ + ++ QD +
Sbjct: 188 DGGQGDDNISGVSGDDSISGGFGEDTVDGGSGDDWIFGGGDDDVLNGGINVGQDTIEAGD 247
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + D + ++ + + D + E +GRD F
Sbjct: 248 GNDFVDGGDGSDNLSGDLGDDTMKGGGGRDSMYGGRDDDALDGDSGNDEMFGGDGRDTVF 307
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 57/189 (30%), Gaps = 11/189 (5%)
Query: 203 GNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEK 258
+NI + S T+ GDD + GG + ++ +N +I +
Sbjct: 193 DDNISGVSGDDSISGGFGEDTVDGGSGDDWI---FGGGDDDVLNGGINVGQD-TIEAGDG 248
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + +++ G G+D + G + + +D DG SG D F
Sbjct: 249 NDFVDGGDGSDNLSGDLGDDTMKGGGGRDSMYGGRDDDALDGDSGNDEMFGGDGRDTV-F 307
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIG 376
N + ++ S + + IL + LI +
Sbjct: 308 GDTGNDTVDGGDDQDLVVGSSGDDSVSGGSGDDTVAGGSGEDILVGGTDNDILIGGGSLL 367
Query: 377 QDVFESMKH 385
D +
Sbjct: 368 TDEDPPVAD 376
Score = 45.5 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N + + + + G +GND + N+ + SGND G SG D +
Sbjct: 3 NVTGTSGNDFLLGSSNEDYIRGLAGNDRIFALGDNDRVYGGSGNDTVSGGSGNDRMYGDT 62
Query: 312 PSYL 315
Sbjct: 63 TGSS 66
Score = 41.3 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYR 320
+V G+SGND ++G+S + +GND G SG DT + +
Sbjct: 3 NVTGTSGNDFLLGSSNEDYIRGLAGNDRIFALGDNDRVYGGSGNDTVSGGSGNDRMYGDT 62
Query: 321 FENAIIVY 328
++ ++
Sbjct: 63 TGSSGVLL 70
>gi|108995571|ref|XP_001095296.1| PREDICTED: matrix metalloproteinase-23 [Macaca mulatta]
Length = 390
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 27/146 (18%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNP-NAQEVARWALGEWSKVVDLTFEETS--I 75
R + +R+ LT LSF L+P + A WS V +F E +
Sbjct: 77 RRYTLTPARLRWDHFNLTYRILSFPRNLLSPRETRRALAAAFRMWSDVSPFSFREVAPEQ 136
Query: 76 HSDIKFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG-- 117
SD++ + T +F I+FD ++ W G +
Sbjct: 137 PSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSW 196
Query: 118 ------TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 197 KKGVWLTDLVHVAAHEIGHALGLMHS 222
>gi|60810636|gb|AAX36150.1| matrix metalloproteinase 23B [synthetic construct]
Length = 391
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 27/146 (18%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNP-NAQEVARWALGEWSKVVDLTFEETS--I 75
R + +R+ LT LSF L+P + A WS V +F E +
Sbjct: 77 RRYTLTPARLRWDHFNLTYRILSFPRNLLSPRETRRALAAAFRMWSDVSPFSFREVAPEQ 136
Query: 76 HSDIKFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG-- 117
SD++ + T +F I+FD ++ W G +
Sbjct: 137 PSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSW 196
Query: 118 ------TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 197 KKGVWLTDLVHVAAHEIGHALGLMHS 222
>gi|5902004|ref|NP_008914.1| matrix metalloproteinase-23 precursor [Homo sapiens]
gi|117949605|sp|O75900|MMP23_HUMAN RecName: Full=Matrix metalloproteinase-23; Short=MMP-23; AltName:
Full=Femalysin; AltName: Full=MIFR-1; AltName:
Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
Full=Matrix metalloproteinase-22; Short=MMP-22;
Contains: RecName: Full=Matrix metalloproteinase-23,
soluble form; Flags: Precursor
gi|2879943|dbj|BAA24833.1| MIFR-1 [Homo sapiens]
gi|3645918|gb|AAC63527.1| metalloprotease isoform A [Homo sapiens]
gi|4468604|emb|CAB38176.1| MMP-23 [Homo sapiens]
gi|7259308|dbj|BAA92769.1| MIFR/Femalysin [Homo sapiens]
gi|19343598|gb|AAH25719.1| Matrix metallopeptidase 23B [Homo sapiens]
gi|61364613|gb|AAX42573.1| matrix metalloproteinase 23B [synthetic construct]
Length = 390
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 27/146 (18%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNP-NAQEVARWALGEWSKVVDLTFEETS--I 75
R + +R+ LT LSF L+P + A WS V +F E +
Sbjct: 77 RRYTLTPARLRWDHFNLTYRILSFPRNLLSPRETRRALAAAFRMWSDVSPFSFREVAPEQ 136
Query: 76 HSDIKFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKG-- 117
SD++ + T +F I+FD ++ W G +
Sbjct: 137 PSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSW 196
Query: 118 ------TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 197 KKGVWLTDLVHVAAHEIGHALGLMHS 222
>gi|15485194|emb|CAC67448.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 26/207 (12%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNT 247
++YG G++ Q + + G+D +D + G G K
Sbjct: 598 RLYGE----AGDD----WFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLG 649
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++S+ + + +H IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 650 KGFASLMDEPETSNVLRH--IENAVGSVRDDVLIGDAGANVLNGLTGNDVLSGGAGDDVL 707
Query: 308 FYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S ++ + + D + + +N
Sbjct: 708 LGDEGSDLLSGDAGNDDLFGGQGDDTYLFGAGYGHDTIYE----SGGGHDTIRINAGADQ 763
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + I+++G D ++ +Y
Sbjct: 764 LWFARQGNDLEIRILGTDDALTVHDWY 790
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G +GND + GN+ +N +G+D DG +G DT ++ +
Sbjct: 154 VQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQ 213
Query: 328 YDANEHKQ-DFLSDVERLRF 346
Q D + V+ +++
Sbjct: 214 DLGVWSNQLDGGAGVDTVKY 233
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQ 264
Y ++ S + G D D V+N ++ S IG + N + Q
Sbjct: 371 YGFGIEADLSREWVRKASALGVDYYD-----SVRNVENVIGTSMKDVLIGDAQANTLMGQ 425
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V G G+D++ G N++ + +GND G G DT A + +
Sbjct: 426 G-GDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWF 476
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 3/135 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASY 368
+ I V + + F AD + V ++Y S
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSV 398
Query: 369 EDLIQVIGQDVFESM 383
++ VIG + + +
Sbjct: 399 RNVENVIGTSMKDVL 413
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 60/194 (30%), Gaps = 15/194 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYI----------DLNTESWSSIGGY 256
+V +D D G G D + + + + DL +
Sbjct: 207 GDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGETGIHADLQKGTVEKWPAL 266
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++ IE++ GSS ND + G+ +N + GND G G D
Sbjct: 267 -NLFSVDHVKNIENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLD-- 323
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVI 375
+Y + I +E D + L D K + EY E DL +
Sbjct: 324 TLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREW 383
Query: 376 GQDVFESMKHFYEF 389
+ +Y+
Sbjct: 384 VRKASALGVDYYDS 397
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 45/190 (23%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-------IYDSGGDDLLDLTLI 236
M+ +YG LG++ +E + F QT + G D +D +
Sbjct: 448 MLYGDAGNDTLYG----GLGDDT--LEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQA 501
Query: 237 GG----VKNYIDLNTESWSSIGGYEKN-----MTIAQHTV--IESVVGS----------- 274
G I L + +G + + A TV IE+VVG+
Sbjct: 502 GAHAGVATGRIGL--GILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQ 559
Query: 275 -------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G DV+ G ++V G+D G +G D + A + NA +
Sbjct: 560 ANVLRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNL 618
Query: 328 YDANEHKQDF 337
D +
Sbjct: 619 LDGGDGNDTV 628
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 23/152 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-----------FDG 300
SI G + +A + + G +GND ++G +N +G+DV DG
Sbjct: 165 SITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDG 224
Query: 301 SSGLDTFFYY-APSYLYKIYRFENAIIVYDANEH-----------KQDFLSDVERLRFAD 348
+G+DT Y ++ R I D + D + ++E L +
Sbjct: 225 GAGVDTVKYNVHQPSEERLERMGETGIHADLQKGTVEKWPALNLFSVDHVKNIENLHGSS 284
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L + + G D+
Sbjct: 285 LNDSIAGDDRDNELWGDDGNDTIHGRGGDDIL 316
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + + G +G+D + G + N+ G++ G +G D F +
Sbjct: 159 GGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVW 218
Query: 315 LYKIYRFENAIIV 327
++ V
Sbjct: 219 SNQLDGGAGVDTV 231
Score = 38.2 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 59/206 (28%), Gaps = 31/206 (15%)
Query: 204 NNIYKIEVQ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------- 252
+ +Y + Q D I G D +D + + + + +
Sbjct: 323 DTLYGEDGNDIFLQDDETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSRE 382
Query: 253 -IGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ +V +E+V+G+S DV+IG++ N G+D T
Sbjct: 383 WVRKASALGVDYYDSVRNVENVIGTSMKDVLIGDAQANTLMGQGGDD---------TVRG 433
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
L F + D L D ++ ++
Sbjct: 434 GDGDDLL----FGGDGNDMLYGDAGNDTLYG----GLGDDTLEGGAGNDWFGQTPAREHD 485
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGR 395
L G D + + G++ GR
Sbjct: 486 VLRGGAGVDTVDYSQAGAHAGVATGR 511
>gi|301606175|ref|XP_002932698.1| PREDICTED: matrix metalloproteinase-21-like [Xenopus (Silurana)
tropicalis]
Length = 604
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 65/174 (37%), Gaps = 41/174 (23%)
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH----SDIKFISS-------NNGYVCTPR-YDSR 97
+ V R A WS+++ L FEE + DIK + + + + +
Sbjct: 228 EQRYVFRLAFRMWSEIMPLDFEEDNTSPLSQIDIKLGFGRGRHLGCSRAFDGSGQEFAHA 287
Query: 98 YF-MEINFDKADVWR-YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+F +I+FD + + G L A HEIGH LGL H
Sbjct: 288 WFLGDIHFDDDEHFTAPSSEHGISLLKVATHEIGHVLGLSHIH----------------- 330
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ S+M P D+ F + D A+Q +YG+ +G + ++
Sbjct: 331 --RVGSIM---QPNYIPQDSGFELDRS----DRRAIQNLYGSCEGPF-DTVFDW 374
>gi|261349826|ref|ZP_05975243.1| glycosyl transferase, group 2 family [Methanobrevibacter smithii
DSM 2374]
gi|288860610|gb|EFC92908.1| glycosyl transferase, group 2 family [Methanobrevibacter smithii
DSM 2374]
Length = 533
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 18/103 (17%)
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D A ++Y +G E F Y +++D + G H+ GY E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDD----------VKGDGLTHYLVKGYLE 62
Query: 562 GR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
GR S+ F+PD Y +Y D+ + HYI HG EG
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEG 101
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D ++MK++ +G E FD Y +YDD++ G HY+ G EGR
Sbjct: 13 NFDFRKAMKNYKYYGAIE-ESGLFDEKFYSKTYDDVK-------GDGLTHYLVKGYLEGR 64
Query: 436 NPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
P F Y ++ D+ A + H+ G +EG+ +
Sbjct: 65 LPSLDFDPDFYNNNYPDVHRAQLNP-------LLHYIAHGKDEGKIFQYA 107
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 18/105 (17%)
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D A ++Y +G E F Y +++D+ G H+ G
Sbjct: 14 FDFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDVK----------GDGLTHYLVKGYL 61
Query: 477 EGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
EGR + FD Y +Y D+ + HYI HG EG+
Sbjct: 62 EGRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEGK 102
>gi|195936053|ref|ZP_03081435.1| hypothetical protein EscherichcoliO157_06236 [Escherichia coli
O157:H7 str. EC4024]
Length = 806
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G + Y S T +GG D++D L T + SS
Sbjct: 582 ATAGTDTYDGSGGWVYSSGTGTWLANGGMDVVDFRLSTVG------VTANLSSTAAQATG 635
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKI 318
+ T IE + GS+ ND++ G+S +N GND + G+ G DT Y +
Sbjct: 636 FNTSTFTNIEGISGSNFNDILTGSSGDNQLEGRGGNDTLNIGNGGHDTLLYKLLNASDAT 695
Query: 319 YRFENAII 326
+ ++
Sbjct: 696 GGNGSDVV 703
>gi|118488262|gb|ABK95950.1| unknown [Populus trichocarpa]
Length = 304
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 13/98 (13%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI------------NFD 105
A +WS V LTF+E S + + + Y +I ++D
Sbjct: 178 AFKKWSDVSPLTFQEASDGASANIVIAFYRGDHGDGYPFDGPGKILAHAFSPENGRFHYD 237
Query: 106 KADVWRYGIGKGTILSH-NALHEIGHALGLMHPGSYNG 142
+ W I A+HEIGH LGL H N
Sbjct: 238 ADEKWSTNPAMDQIDLESVAVHEIGHLLGLAHSSDSNA 275
>gi|260718957|ref|YP_003225098.1| hemolysin A [Escherichia coli O103:H2 str. 12009]
gi|157688248|gb|ABQ02441.1| enterohemolysin [Escherichia coli]
gi|257762468|dbj|BAI33964.1| hemolysin A [Escherichia coli O103:H2 str. 12009]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFES 382
D LS + L + +IL + L I
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 RQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
>gi|15837613|ref|NP_298301.1| hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
gi|9105947|gb|AAF83821.1|AE003938_12 hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1636
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 70/232 (30%), Gaps = 58/232 (25%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
SY+ + + + +YG+ + Y TI
Sbjct: 1164 SYWSADNVLSGGTG-------------DDTLYGSAFA----DTYLFN----QGDGHDTII 1202
Query: 224 DSGGDDLLDLT----------LIGGVKNYIDLNTESWS-------------SIGGYEKNM 260
+ GG D L L G +DL S + + +
Sbjct: 1203 EQGGTDKLVFGEGILAADVRLLREGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQI 1262
Query: 261 TIAQHTVIE---------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
A T+ + +G+SGND + G ++ +G+DV DG G + A
Sbjct: 1263 VFADGTLWTPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGA 1322
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ K+ + ++ D L FAD + + +I+E
Sbjct: 1323 GDDVLKVSYWSADNVL--IGGTGDDTLYGS---AFADTYLFNKGDGHDTIIE 1369
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 71/232 (30%), Gaps = 58/232 (25%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
SY+ + ++ + +YG+ + Y TI
Sbjct: 998 SYWSADNVLIGGTG-------------DDTLYGSAFA----DTYLFN----QGDGHDTII 1036
Query: 224 DSGGDDLLDLT----------LIGGVKNYIDLNTESWS-------------SIGGYEKNM 260
+ GG D L L G +DL S + + +
Sbjct: 1037 EQGGTDKLVFGEGILAADVRLLREGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQI 1096
Query: 261 TIAQHTVIE---------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
A T+ + +G+ GND + G ++ +G+DV DG G + A
Sbjct: 1097 VFADGTLWTPETLSSMGLTTLGTPGNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGA 1156
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ K+ + ++ + D L FAD + + +I+E
Sbjct: 1157 GDDVLKVSYWSADNVL--SGGTGDDTLYGS---AFADTYLFNQGDGHDTIIE 1203
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 22/116 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVI---------GNSANNVFFESSGND------- 296
+ G + ++ +++ G +GND + G +N +GND
Sbjct: 941 LRGGGGDDVLSGGGGNDTLEGGAGNDTLYGDDGDDVLDGGEGSNRLEGGAGNDVLKVSYW 1000
Query: 297 ----VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
V G +G DT + A + Y + + + + D L E + AD
Sbjct: 1001 SADNVLIGGTGDDTLYGSAFADTYLFNQGDGHDTI--IEQGGTDKLVFGEGILAAD 1054
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 48/138 (34%), Gaps = 6/138 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G +++ G ++V GND +G +G DT + + N +
Sbjct: 930 DLLFGDAGANLLRGGGGDDVLSGGGGNDTLEGGAGNDTLYGDDGDDVLDGGEGSNRLEGG 989
Query: 329 DANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
N+ + + + D + + ++ +I+ G D +
Sbjct: 990 AGNDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEG 1049
Query: 386 FYEFG---LSEGRDITFD 400
L EG+D+ D
Sbjct: 1050 ILAADVRLLREGQDVVLD 1067
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 72/288 (25%), Gaps = 84/288 (29%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
SY+ + ++ + +YG+ + Y TI
Sbjct: 1330 SYWSADNVLIGGTG-------------DDTLYGSAFA----DTYLFN----KGDGHDTII 1368
Query: 224 DSGGDDLLDLT----------LIGGVKNYIDLNTESWS-------------SIGGYEKNM 260
+ GG D L L G +DL S + + +
Sbjct: 1369 EQGGTDKLVFGEGILAADVRLLREGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQI 1428
Query: 261 TIAQHTVIE---------SVVGSSGNDVVIGNSA------------------NNVFFESS 293
A T+ + +G+ GND + G +N +
Sbjct: 1429 VFADGTLWTPETLSSMGLTTLGTPGNDTLKGWQGKDILLGGDGDDVLDGGEGSNRLEGGA 1488
Query: 294 GND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
G+D V G +G DT + A + Y + + + + D L
Sbjct: 1489 GDDVLKVSYWSADNVLSGGTGDDTLYGSAFADTYLFNKGDGHDTI--IEQGGTDKLVFGA 1546
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L + + + + + ++ G
Sbjct: 1547 GLSRKEARFTRSGDDLSLLFNGSEDQVTVAGWFNGSGHQVESLVFQDG 1594
>gi|319761846|ref|YP_004125783.1| hemolysin-type calcium-binding region protein [Alicycliphilus
denitrificans BC]
gi|317116407|gb|ADU98895.1| Hemolysin-type calcium-binding region protein [Alicycliphilus
denitrificans BC]
Length = 1025
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G ++IDL + G + T +++ G GND+++G + N++ + N
Sbjct: 664 DGTAWSHIDLTAWALVVTGTEQGERLEGVGTFNDTLYGLGGNDILVGGAGNDILDGGADN 723
Query: 296 DVFDGSSGLDTFFYYAPSYL 315
DV DG G D + +
Sbjct: 724 DVLDGGVGADVLLGGSGDDV 743
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 21/110 (19%)
Query: 221 TIYDSGGDDLLDLTLIG------GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ +GG+D T G + I+ + S SS + +++ G
Sbjct: 432 TVVLTGGNDTYTGTAGADIVYGMGGSDIINGDPASASSSDR------VYGGDGNDTLYGL 485
Query: 275 SGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFFYYAPSYL 315
GND + G ++ + G ND DG G DT A +
Sbjct: 486 GGNDQLYGQQGDDKLYGGDGDDLLDGGSDNDTLDGGRGADTLIGGAGDDI 535
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G GNDV+ G + ++ + GND G G D F+Y+ Y +
Sbjct: 903 TLLGEGGNDVLNGGTLSDQLWGGLGNDHLYGGQGSD-FYYHRLGDGYDTVVDSGGMADTL 961
Query: 330 ANEHK 334
Sbjct: 962 VFPDA 966
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 36/115 (31%), Gaps = 27/115 (23%)
Query: 248 ESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-------- 298
+++ + G N + + + G + NDV+ G +V SG+DV
Sbjct: 693 GTFNDTLYGLGGNDILVGGAGNDILDGGADNDVLDGGVGADVLLGGSGDDVLGGALGSED 752
Query: 299 ------------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+G +G DT A + Y E + + Q
Sbjct: 753 SGRVVHGTFQSPGAGNVYEGGTGNDTLRGTALADTYHFNLGEGQDSLTEVEMAGQ 807
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 30/124 (24%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
F T+Y GG+D+L +GG N I + G N + + ++G S
Sbjct: 693 GTFNDTLYGLGGNDIL----VGGAGNDI---------LDGGADNDVLDGGVGADVLLGGS 739
Query: 276 GNDVVIGN-----------------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
G+DV+ G A NV+ +GND G++ DT+ + +
Sbjct: 740 GDDVLGGALGSEDSGRVVHGTFQSPGAGNVYEGGTGNDTLRGTALADTYHFNLGEGQDSL 799
Query: 319 YRFE 322
E
Sbjct: 800 TEVE 803
Score = 44.7 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 72/247 (29%), Gaps = 56/247 (22%)
Query: 196 GAPKGSLG----NNIYKI------EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVK 240
G G + +Y + + +Y G+D L + L G
Sbjct: 437 GGNDTYTGTAGADIVYGMGGSDIINGDPASASSSDRVYGGDGNDTLYGLGGNDQLYGQQG 496
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS---------------- 284
+ + + G N T+ ++++G +G+D++ G +
Sbjct: 497 DDKLYGGDGDDLLDGGSDNDTLDGGRGADTLIGGAGDDILGGAAGSVDAGYYNGYYGLGY 556
Query: 285 ----ANNVFFESSGNDVFDG-----------SSGLDTF----FYYAPSYLYKIYRFENAI 325
A N + G D +G G DT PS + RF I
Sbjct: 557 YDPGAGNTYRGGKGADTLNGTSRADRYLFDLGDGHDTLREVEVTGQPSGQVDVLRFGPGI 616
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D + + V+ + DSV VK +++ ++ + + H
Sbjct: 617 APADISIRRST----VDLVLAHVNGTDSVTVKSWFTAPGSSAN--QVERVEFADGTAWSH 670
Query: 386 FYEFGLS 392
+
Sbjct: 671 IDLTAWA 677
>gi|77747511|ref|NP_297958.2| hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1207
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 72/232 (31%), Gaps = 58/232 (25%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
SY+ + ++ + +YG+ + Y TI
Sbjct: 735 SYWSADNVLIGGTG-------------DDTLYGSAFA----DTYLFN----QGDGHDTII 773
Query: 224 DSGGDDLLDLT----------LIGGVKNYIDLNTESWS-------------SIGGYEKNM 260
+ GG D L L G +DL S + + +
Sbjct: 774 EQGGTDKLVFGEGIVAADVRLLRQGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQI 833
Query: 261 TIAQHTVIE---------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
A T+ + +G+SGND + G ++ +G+DV DG G + A
Sbjct: 834 VFADGTLWTPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGA 893
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + K+ + ++ D L FAD + + +I+E
Sbjct: 894 GNDVLKVSYWSADNVL--IGGTGDDTLYGS---AFADTYLFNQGDGHDTIIE 940
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 70/212 (33%), Gaps = 19/212 (8%)
Query: 113 GIGKGTILSHNALHEIGHALG----LMHPGSYNGGYPVYGVDNDYENDSFLTSV-MS-YF 166
G T + +H GH+ L+ P N Y ++ + S +S Y
Sbjct: 494 STGGETFTWNRVIHPDGHSEDVMSILLQPEQINSLMSAYASLKEFAYAGLVLSTRLSDYL 553
Query: 167 MPQD-SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ + +FG+ A+ + + + K ++ + ++ +
Sbjct: 554 SGLTLTYSNDAFGWDASALE---AKLDHTWQHNKTQALQDVMDLYRYGSNA------VAA 604
Query: 226 GGDDLLDL--TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G D +I D ++ + T + + G +G +++ G
Sbjct: 605 SGWKPFDALRHMIDRTAATPDGRQALAAAEITLVSG-SAEGSTAADLIFGDAGANILRGG 663
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ ++V G+D G G DT + A +
Sbjct: 664 AGDDVLSGGDGDDTLYGGDGNDTLYGDAGNDT 695
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 80/311 (25%), Gaps = 87/311 (27%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+GG ++ ND SY+ + ++ + +YG+
Sbjct: 881 DGGEGSNRLEGGAGNDVLKV---SYWSADNVLIGGTG-------------DDTLYGSAFA 924
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTESW 250
+ Y TI + GG D L L G +DL
Sbjct: 925 ----DTYLFN----QGDGHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVLDLGNGHD 976
Query: 251 S-------------SIGGYEKNMTIAQHTVIE---------SVVGSSGNDVVIGNSA--- 285
S + + + A T+ + +G+ GND + G
Sbjct: 977 SIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTPGNDTLKGWQGKDI 1036
Query: 286 ---------------NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIY 319
+N +GND V G +G DT + A + Y
Sbjct: 1037 LLGGDGDDVLDGGEGSNRLEGGAGNDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFN 1096
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + D L E L + + + +
Sbjct: 1097 KGDGHDTI--IEQSGTDKLVFGEGLHQKEARFTRSGDDLSLLFNGSEDQVTIAGWFNGSG 1154
Query: 380 FESMKHFYEFG 390
+ ++ G
Sbjct: 1155 HQVESLVFQDG 1165
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 32/134 (23%)
Query: 245 LNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDV------------------VIGNSA 285
L + + G + + T+ +++ G +GND + G
Sbjct: 660 LRGGAGDDVLSGGDGDDTLYGGDGNDTLYGDAGNDTLYGGGGNDLLLGGDGDDVLDGGEG 719
Query: 286 NNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+N +G+D V G +G DT + A + Y + + + +
Sbjct: 720 SNRLEGGAGDDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFNQGDGHDTI--IEQGG 777
Query: 335 QDFLSDVERLRFAD 348
D L E + AD
Sbjct: 778 TDKLVFGEGIVAAD 791
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 13/125 (10%)
Query: 271 VVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAPSYL--YKIYRFENAII 326
++G +G+D + G++ + F + G+D SG D + + + R + +
Sbjct: 1075 LIGGTGDDTLYGSAFADTYLFNKGDGHDTIIEQSGTDKLVFGEGLHQKEARFTRSGDDLS 1134
Query: 327 VYDANEHKQDFLSD--------VERLRFADQCIDSVNV-KQRSILEYTASYEDLIQVIGQ 377
+ Q ++ VE L F D + S V + + + + + L +G
Sbjct: 1135 LLFNGSEDQVTIAGWFNGSGHQVESLVFQDGTVLSGEVERLIAAMALSPAATTLQASVGD 1194
Query: 378 DVFES 382
Sbjct: 1195 HKESP 1199
>gi|67924656|ref|ZP_00518066.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
gi|67853506|gb|EAM48855.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
Length = 766
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I+ E+ G + N TIA +++ G +G+D + GN N+ S G+D G
Sbjct: 2 INAALETGEKFWGTDGNDTIAGGEGNDTIGGGNGDDSLSGNGGNDRIMASHGDDQVSGGE 61
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
G D + + ++ I + D L E
Sbjct: 62 GNDRLWGGNGNDTVSGDDGDDTI----SGGMGADILDGGE 97
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSS 275
I+ G+DL+ S I G N +I+ +++ G
Sbjct: 495 AGNDKIWAGDGNDLVS--------------GGEGSDRITGDGGNDSISGGENDDTITGGD 540
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D + G++ N+ + GND G G D + + N I++ ++ +
Sbjct: 541 GDDTITGDAGNDKLWGDGGNDSISGGEGDDMIWDRMGEDVLD-GGEGNDILISRSDAGEP 599
Query: 336 DFLSDVE 342
D + +
Sbjct: 600 DIAQETD 606
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ + G+D + GG N +IGG + +++ + + ++ S G+D V G
Sbjct: 13 WGTDGNDTI----AGGEGND---------TIGGGNGDDSLSGNGGNDRIMASHGDDQVSG 59
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
N+ + +GND G G DT + + N I+ ++ D
Sbjct: 60 GEGNDRLWGGNGNDTVSGDDGDDTISGGMGADILD-GGEGNDRIISRSDAGVPD 112
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 47/151 (31%), Gaps = 31/151 (20%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I+ G+DL+ G + I N + S I G + + TI + + G +G
Sbjct: 405 AGNDKIWAGDGNDLVSG---GEGSDRITGNGGNDS-ISGGDGDDTITGGDGDDVITGEAG 460
Query: 277 NDVVIGN---------------------------SANNVFFESSGNDVFDGSSGLDTFFY 309
D + GN + N+ + GND+ G G D
Sbjct: 461 KDRLWGNADNDKISCGDDNDTLGGGDGDDTLNGDAGNDKIWAGDGNDLVSGGEGSDRITG 520
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ ++ I D ++ +
Sbjct: 521 DGGNDSISGGENDDTITGGDGDDTITGDAGN 551
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 248 ESWSSIG---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+++SI G ++N I+ +++ G G+D + G + N+ F G+D+ G G
Sbjct: 276 GAFTSIYKTVGTDENDLISGTDNKDTIDGGDGDDTLNGEAGNDRIFAGDGDDLVSGGDGK 335
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D + + ++ I D ++
Sbjct: 336 DKLWGNVGNDTISGGDGDDTITGGDGDDVIT 366
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 32/117 (27%), Gaps = 36/117 (30%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE----------------------- 291
G N TI+ +++ G G+DV+ G + + +
Sbjct: 340 GNVGNDTISGGDGDDTITGGDGDDVITGEAGKDRLWGNADNDKISGGDDNDTLGGGDGDD 399
Query: 292 -------------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND+ G G D + ++ I D ++
Sbjct: 400 TLNGDAGNDKIWAGDGNDLVSGGEGSDRITGNGGNDSISGGDGDDTITGGDGDDVIT 456
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 40/137 (29%), Gaps = 41/137 (29%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ TI G+D + D +L G N + + + G E N + +
Sbjct: 14 GTDGNDTIAGGEGNDTIGGGNGDDSLSGNGGNDRIMASHGDDQVSGGEGNDRLWGGNGND 73
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGND--------------------------------- 296
+V G G+D + G ++ GND
Sbjct: 74 TVSGDDGDDTISGGMGADILDGGEGNDRIISRSDAGVPDKGHDHSQMHPHQPSLDADDSL 133
Query: 297 ---VFDGSSGLDTFFYY 310
G SG DTF +
Sbjct: 134 ADDTLIGGSGADTFRFE 150
>gi|312372128|gb|EFR20157.1| hypothetical protein AND_20564 [Anopheles darlingi]
Length = 534
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 17/103 (16%)
Query: 57 WALGEWSKVVDLTFEET-SIHSDI------KFISSNNGYVCTPRYDSRYFM-------EI 102
AL WS+ +++F E S +DI KF + + + F +
Sbjct: 15 EALDLWSRHANISFREVYSTEADIQVMFARKFHGDGYNFDGPGKILAHAFYPGSGIGGDA 74
Query: 103 NFDKADVWRYG---IGKGTILSHNALHEIGHALGLMHPGSYNG 142
+FD+ + W +GT L ALHE GH+LGL H N
Sbjct: 75 HFDEEESWLLNEPLDAEGTRLFDVALHEFGHSLGLGHSSQQNA 117
>gi|284050793|ref|ZP_06381003.1| hypothetical protein AplaP_04894 [Arthrospira platensis str.
Paraca]
Length = 303
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 49/137 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N TI ++++G +GND++ GN ++ + +GND G DT + A
Sbjct: 92 SLLGGSNNDTIYGKAGSDTLLGEAGNDLLFGNQGRDLLYGGNGNDTLYGGQEADTLYGEA 151
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
L + + D N+ +D + S + +++ +
Sbjct: 152 GDDLLFGNLANDWLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSFV 211
Query: 372 IQVIGQDVFESMKHFYE 388
+ + V
Sbjct: 212 VSSLSGGVNIREADVIM 228
>gi|254489132|ref|ZP_05102336.1| hemolysin-type calcium-binding protein [Roseobacter sp. GAI101]
gi|214042140|gb|EEB82779.1| hemolysin-type calcium-binding protein [Roseobacter sp. GAI101]
Length = 1081
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 35/95 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N TI+ +++ G +GND + G + N+ +GND G +G DT
Sbjct: 451 TTTGAGNDTISGGAGNDTIFGEAGNDSLSGGADNDSISGGAGNDTILGGTGNDTMSGGDG 510
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ L+ IV + D L A
Sbjct: 511 ADLFVAQDGFGTDIVIGGEGGTDNDTLDFSALTGA 545
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 55/186 (29%), Gaps = 44/186 (23%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQT----------IYDSG-GDDLLDLTLIGGVKNYID 244
GA S+G+ Y I D I+T + D G G D G+ N I+
Sbjct: 596 GADTISVGSGTYDINAGDGDDRIIRTEVTNSTEAASVIDGGAGTDTYVAGGALGI-NTIN 654
Query: 245 LNTESWSSIGGYEK-----------------------NMTIAQHTVIESVVGSSGNDVVI 281
L G N+ A + G G+D++
Sbjct: 655 LAANQLEFQGASRGSLLNFENVELDNIDATVVGNDGANVITATGDFANLLSGGGGDDLIS 714
Query: 282 GNSA---------NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
N+ GND G +G D F Y + + + N + D +
Sbjct: 715 AGGGDDTVDGGTGNDTLDGGLGNDRLTGGAGDDVFIYSGGNDVITDFNTGNTGTLDDGDA 774
Query: 333 HKQDFL 338
DF+
Sbjct: 775 TNNDFI 780
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 26/64 (40%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND + + F +G+DV +G +G D + + + + I +
Sbjct: 203 IDGGAGNDTINAGGGADTVFGGAGDDVLNGGAGADLLRGDSSIGAETSFSWASQGIGDGS 262
Query: 331 NEHK 334
+
Sbjct: 263 SVTG 266
>gi|118201529|gb|ABK79673.1| hemolysin toxin protein [Escherichia coli O157:H7]
gi|118724616|gb|ABL10878.1| hemolysin toxin protein A [Escherichia coli]
Length = 998
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 GQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 57/194 (29%), Gaps = 31/194 (15%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D LS D L+ +Y L G D
Sbjct: 759 QLFGGSGNDKLSG------GDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGID 812
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-----ITHGVKEGR---NPDA 439
EG D YL FG+D ++Y G K R + +
Sbjct: 813 LLDGGEGND-------YL------NGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLSDIS 859
Query: 440 FKALEYIASHEDLI 453
F + + DLI
Sbjct: 860 FDDIAFKRVGNDLI 873
>gi|90425670|ref|YP_534040.1| glycosyl transferase, group 1 [Rhodopseudomonas palustris BisB18]
gi|90107684|gb|ABD89721.1| glycosyl transferase, group 1 [Rhodopseudomonas palustris BisB18]
Length = 846
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
+ SY ++ + H+ +FG G + FD YL Y DL G +G
Sbjct: 11 FFDESYYAFSGEAKKNGIRPIDHYLQFGEQLGAAPSTRFDPKYYLKQYPDL----GGWQG 66
Query: 421 AAARHYITHGVKEGR 435
HY+ +G EGR
Sbjct: 67 GLLNHYLQYGRAEGR 81
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 13/86 (15%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYD 577
+ + F Y A + P DH+ FG + G S F+P YL Y
Sbjct: 7 SIEEFFDESYYAFSGE-AKKNGIRP------IDHYLQFGEQLGAAPSTRFDPKYYLKQYP 59
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGR 603
DL G HY+ +G EGR
Sbjct: 60 DLGGWQGG----LLNHYLQYGRAEGR 81
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 25/82 (30%), Gaps = 13/82 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y + HY+ G + G P F Y+ + DL
Sbjct: 12 FDESYY-----AFSGEAKKNGIRPIDHYLQFGEQLGAAPSTRFDPKYYLKQYPDLGGWQG 66
Query: 458 DAPDLVQVGKDHFSNFGCEEGR 479
+H+ +G EGR
Sbjct: 67 G-------LLNHYLQYGRAEGR 81
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y +A DH+ FG + G + FD YL Y DL
Sbjct: 12 FDESYY--------AFSGEAKKNGIRPIDHYLQFGEQLGAAPSTRFDPKYYLKQYPDL-- 61
Query: 498 VFGSDRGAAARHYITHGVKEGR 519
G +G HY+ +G EGR
Sbjct: 62 --GGWQGGLLNHYLQYGRAEGR 81
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 8/60 (13%)
Query: 506 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
HY+ G + G P F Y+ + DL +H+ +G EGR
Sbjct: 30 PIDHYLQFGEQLGAAPSTRFDPKYYLKQYPDLGGWQG-------GLLNHYLQYGRAEGRQ 82
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I F + + E K++ + ++ + + + + Y Y DL G
Sbjct: 7 SIEEFFDESYYAFSGEAKKNGIRPIDHYLQFGEQLGAAPSTRFDPKYYLKQYPDLGGWQG 66
Query: 377 QDVFESMKHFYEFGLSEGR 395
+ H+ ++G +EGR
Sbjct: 67 G----LLNHYLQYGRAEGR 81
>gi|259418026|ref|ZP_05741945.1| type I secretion target repeat protein [Silicibacter sp. TrichCH4B]
gi|259346932|gb|EEW58746.1| type I secretion target repeat protein [Silicibacter sp. TrichCH4B]
Length = 358
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 42/142 (29%), Gaps = 9/142 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G ++A +S++G G D + G+ ++ SGND+ G +G D
Sbjct: 150 TLNGGTGQDSLAGGAGNDSLLGGLGTDRIQGDEGDDTLHGGSGNDLVRGGAGNDAVHGND 209
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ F D +S + D A D+
Sbjct: 210 DDDM----VFGGTGEDALFGGRGNDVVSGAD-----DGAEKDFVNGGDGDDTLIAGASDV 260
Query: 372 IQVIGQDVFESMKHFYEFGLSE 393
+ + + G E
Sbjct: 261 VTGGDGADQILLGDWIAAGTVE 282
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 55/193 (28%), Gaps = 9/193 (4%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSG---GDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + + D+P I D G G D LD + + L I G+
Sbjct: 61 TEDVSTTGSGDAETDTPQDGGIEDGGVLIGSDELDHMSGSDADDAL-LGLGGDDQINGFG 119
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++ + + G G D + G N+ +G D G +G D+ + +
Sbjct: 120 GDDSLEGGAGDDDLYGGEGQDTLEGGDDNDTLNGGTGQDSLAGGAGNDSLLGGLGTDRIQ 179
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + + + + + D L + +
Sbjct: 180 -GDEGDDTLHGGSGNDLVRGGAGNDAVHGNDDDDMVFGGTGEDALFGGRGNDVVSGA--- 235
Query: 378 DVFESMKHFYEFG 390
+ K F G
Sbjct: 236 -DDGAEKDFVNGG 247
>gi|220925547|ref|YP_002500849.1| CHRD domain containing protein [Methylobacterium nodulans ORS 2060]
gi|219950154|gb|ACL60546.1| CHRD domain containing protein [Methylobacterium nodulans ORS 2060]
Length = 460
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 7/161 (4%)
Query: 203 GNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
GN++ + +Y G+D + GG N + + G +
Sbjct: 281 GNDVVNGDAGNDLIFGDDGDDAVYGGAGNDRV----YGGTGNDLVSGDGGQDQLFGEQGE 336
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G +GND + G ++ F ++GNDV G G D F + I
Sbjct: 337 DVLLGGAGPDYLSGGAGNDQLFGGEGADLLFGNAGNDVLTGGLGADVFAFGRGDGQDVIR 396
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
F D ++ A Q + S V
Sbjct: 397 DFVTGGAERDVIAFNNGAFGSFAAVQAATQQVGSDAVIAYG 437
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 10/180 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N ++ + V G GNDVV G++ N++ F G+D G +G D +
Sbjct: 258 VYGEWGNDFVSGGEGNDFVSGGFGNDVVNGDAGNDLIFGDDGDDAVYGGAGNDRVYGGTG 317
Query: 313 SYLYKI-----YRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYT 365
+ L F D+LS F + D + + +
Sbjct: 318 NDLVSGDGGQDQLFGEQGEDVLLGGAGPDYLSGGAGNDQLFGGEGADLLFGNAGNDVLTG 377
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD--SYLYLGSYDDLRNVFGSDRGAAA 423
D+ D + ++ F G +E I F+ ++ + GSD A
Sbjct: 378 GLGADVFAFGRGDGQDVIRDFVTGG-AERDVIAFNNGAFGSFAAVQAATQQVGSDAVIAY 436
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 45/143 (31%), Gaps = 24/143 (16%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLD 305
G N TI + V G G D V G + N++ F ND+ G +G D
Sbjct: 188 GLAGNDTIQGGDGNDFVSGGFGADSVFGGAGNDLVFGDDDDDLADGGAGNDLVYGGTGSD 247
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-----------VERLRFADQCIDSV 354
F A + + + DF+S L F D D+V
Sbjct: 248 RVFGAAGDDQ----VYGEWGNDFVSGGEGNDFVSGGFGNDVVNGDAGNDLIFGDDGDDAV 303
Query: 355 NVKQRSILEYTASYEDLIQVIGQ 377
+ Y + DL+ G
Sbjct: 304 YGGAGNDRVYGGTGNDLVSGDGG 326
>gi|1710800|sp|P55130|RTX31_ACTPL RecName: Full=RTX-III toxin determinant A from serotype 2; AltName:
Full=APX-IIIA; AltName: Full=Cytolysin IIIA;
Short=CLY-IIIA
gi|470685|gb|AAA21924.1| RTX toxin [Actinobacillus pleuropneumoniae serovar 2]
Length = 1049
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 17/130 (13%)
Query: 199 KGSLGNNI-YKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ G++I Y + + +Y GDD L L G NY + G
Sbjct: 761 NGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKL---LGGNGNNY----------LSG 807
Query: 256 YEKNMTI-AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ N + + G G+D + G+S +++ GND +G G D + Y + S
Sbjct: 808 GDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSG 867
Query: 315 LYKIYRFENA 324
+ IY A
Sbjct: 868 NHTIYDQGKA 877
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D++ GN +++ + GND G +G D + N +
Sbjct: 749 DIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGGNGNNYLSGG 808
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D N+ Q + LR +L+ + L G D
Sbjct: 809 DGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSD 858
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 49/148 (33%), Gaps = 7/148 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + + + + + G GND + G++ N+ + G+D G +G +
Sbjct: 751 FHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGGNGNNYLSGGDG 810
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ ++ + K S + L + Y ++ +
Sbjct: 811 NDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHT 870
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFD 400
+S K + D++FD
Sbjct: 871 IYDQGKASDSDKLYLS-------DLSFD 891
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 2/134 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS D+ G +++ + G+D+ G G D + ++ ++
Sbjct: 740 DEFKGSKFRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGG 799
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHF 386
+ N + + E + K L ++ + L G D E F
Sbjct: 800 NGNNYLSGGDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDF 859
Query: 387 YEFGLSEGRDITFD 400
Y + + G +D
Sbjct: 860 YVYRSTSGNHTIYD 873
>gi|330962916|gb|EGH63176.1| calcium binding hemolysin protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 154
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + GS G+D + G S ++ +GNDV +G +G D+ S +Y+I
Sbjct: 1 GAGDDRLSGSGGHDRLEGGSGADILNGGAGNDVLNGGTGNDSLIGGDGSDIYEINIGSGR 60
Query: 325 IIVYDAN-EHKQDFLSDVERLRFAD 348
++ + + D L + D
Sbjct: 61 DVINNYDVSGGTDVLQFGTEVSLED 85
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 2/147 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFFYY 310
+ G + + + + + G +GNDV+ G + N+ G+D+ + SG D Y
Sbjct: 7 LSGSGGHDRLEGGSGADILNGGAGNDVLNGGTGNDSLIGGDGSDIYEINIGSGRDVINNY 66
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
S + +F + + D + +V + +D+ + S D
Sbjct: 67 DVSGGTDVLQFGTEVSLEDLWFRRNGSDLEVSIIDNSDKVVVSNWYAANDYQVDQFKTAD 126
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ V + + +GR +
Sbjct: 127 GKTLLDSQVQSLVAKWLHLEWMQGRSV 153
>gi|163742687|ref|ZP_02150072.1| hypothetical protein RG210_15120 [Phaeobacter gallaeciensis 2.10]
gi|161383942|gb|EDQ08326.1| hypothetical protein RG210_15120 [Phaeobacter gallaeciensis 2.10]
Length = 422
Score = 60.9 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +++ G +GND +IG + N+ + GND+ G G DTF + +
Sbjct: 301 GQNGDDKLNGSHGADTIRGGAGNDTLIGGNGNDKLYGQQGNDLLIGGDGADTFAFGSNHG 360
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+I FE + K D +S E L D
Sbjct: 361 RARIRDFEVGV-------DKIDIISGAESLSQID 387
Score = 44.7 bits (104), Expect = 0.056, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 26/183 (14%)
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD------SGGDDLLDL- 233
AT ++SDI + + YG Y + DSP + +GG+ LD+
Sbjct: 193 ATLLLSDIASTDE-YGTSILK-----YVKDFGGYDSPTADALIAFWQDRKAGGNAPLDMG 246
Query: 234 ------TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
TL+G V I T + I G N +A + + G G D +IG + ++
Sbjct: 247 EPEVGETLLGTVSRDILDGTGADDLISGRGGNDRLAGRAGDDDLRGGGGRDRLIGQNGDD 306
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSD 340
S G D G +G DT + + + A + H + + D
Sbjct: 307 KLNGSHGADTIRGGAGNDTLIGGNGNDKLYGQQGNDLLIGGDGADTFAFGSNHGRARIRD 366
Query: 341 VER 343
E
Sbjct: 367 FEV 369
>gi|283558389|gb|ACM17707.2| RTX toxin RtxA [Vibrio vulnificus]
Length = 4595
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 66/221 (29%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+L+ +++ + GG K++ + G G+DV +N
Sbjct: 4218 DFLRNSGHLQGDGDINLSLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGTSN 4276
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 4277 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 4335
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ S G D+
Sbjct: 4336 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINASAGNDVV 4395
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N + AA + EGR+
Sbjct: 4396 -----KLMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4431
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 26/136 (19%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL----------DLTL---IGGVKNYIDLNTESWSSI 253
Y + T+Y G+D + D T + G Y D+N
Sbjct: 38 YGGDDHVTVGSIGATVYTGSGNDTVVGGSAYLRVEDTTGHLSVKGAAGYADIN------- 90
Query: 254 GGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFF--ESSGNDVFDGSSGLDTFF 308
+ N++ A I+ + G+ G+ G +A N SGN F G+ G + +
Sbjct: 91 KSGDGNVSFAGAAGGVSIDHL-GNHGDVNYGGAAAYNGITRKGLSGNVTFKGAGGYNALW 149
Query: 309 YYAPSYLYKIYRFENA 324
+
Sbjct: 150 HETNQGNLSFAGAGAG 165
>gi|221327941|gb|ACM17706.1| RTX toxin RtxA [Vibrio vulnificus]
Length = 4595
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 66/221 (29%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+L+ +++ + GG K++ + G G+DV +N
Sbjct: 4218 DFLRNSGHLQGDGDINLSLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGTSN 4276
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 4277 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 4335
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ S G D+
Sbjct: 4336 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGDDFANVFGNYNRINASAGNDVV 4395
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N + AA + EGR+
Sbjct: 4396 -----KLMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4431
Score = 37.0 bits (84), Expect = 9.8, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 26/136 (19%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL----------DLTL---IGGVKNYIDLNTESWSSI 253
Y + +Y G+D + D T + G Y D+N
Sbjct: 38 YGGDDHVTVGSIGAKVYTGSGNDTVVGGSAYLRVEDTTGHLSVKGAAGYADIN------- 90
Query: 254 GGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFF--ESSGNDVFDGSSGLDTFF 308
+ N++ A I+ + G+ G+ G +A N SGN F G+ G + +
Sbjct: 91 KSGDGNVSFAGAAGGVSIDHL-GNHGDVNYGGAAAYNGITRKGLSGNVTFKGAGGYNALW 149
Query: 309 YYAPSYLYKIYRFENA 324
+
Sbjct: 150 HETNQGNLSFAGAGAG 165
>gi|240140943|ref|YP_002965423.1| hypothetical protein MexAM1_META1p4515 [Methylobacterium extorquens
AM1]
gi|240010920|gb|ACS42146.1| hypothetical protein; putative hemolysin-type calcium-binding
repeat domain [Methylobacterium extorquens AM1]
Length = 475
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 2/138 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G T+ + + G GND + G + ++ + +GND DG SG D + A
Sbjct: 336 NRDGTAGAETMTGSNAADDLDGMDGNDTLNGLAGDDALYGGAGNDRLDGGSGTDHLWGGA 395
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + V D D + + + + + + + + + +
Sbjct: 396 GADRFAFKAGNGTDWVEDFETGGSAPDAIEISRSMFGSFEAVLAAAQDVGTDVAIRSGSD 455
Query: 370 DLIQVIGQDVFESMKHFY 387
L Q S H
Sbjct: 456 TLWLADTQKADLSAGHIL 473
>gi|149916041|ref|ZP_01904564.1| heme peroxidase [Roseobacter sp. AzwK-3b]
gi|149810115|gb|EDM69963.1| heme peroxidase [Roseobacter sp. AzwK-3b]
Length = 1388
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 22/152 (14%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGY 256
G+ G++ + + IY G D +D+ + NT + S
Sbjct: 1214 MGNAGDDTF----LGTNGDCNDLIYGGEGTDTIDMASVTSDLTVRLGNTGTDRGSVTTEE 1269
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-------------FDGSSG 303
TI IE+ VG +G+D + + A NV GND +G +
Sbjct: 1270 GGRDTIWS---IENFVGGAGDDTIFASDAANVLDGGDGNDTFVFETAASAQGDHINGLNA 1326
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
D + + ++++ + + + +
Sbjct: 1327 GDVLQFGTGADMFELTWGDTDMQDGLSFSGGE 1358
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 22/142 (15%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + + + G +G+D ++G +++ +G+D+ G++G DTF
Sbjct: 1168 LFGGEGRDDMLGGDGADMLSGGAGSDHILGGDGDDMIIGGTGSDILMGNAGDDTFLGTNG 1227
Query: 313 SYLYKIYRFENAIIVYDAN----------------------EHKQDFLSDVERLRFADQC 350
IY E + A+ E +D + +E
Sbjct: 1228 DCNDLIYGGEGTDTIDMASVTSDLTVRLGNTGTDRGSVTTEEGGRDTIWSIENFVGGAGD 1287
Query: 351 IDSVNVKQRSILEYTASYEDLI 372
++L+ + +
Sbjct: 1288 DTIFASDAANVLDGGDGNDTFV 1309
Score = 40.5 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 42/140 (30%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA--NNVFFESSGNDVFD-- 299
L+ + S I G + + I T + ++G++G+D +G + N++ + G D D
Sbjct: 1186 LSGGAGSDHILGGDGDDMIIGGTGSDILMGNAGDDTFLGTNGDCNDLIYGGEGTDTIDMA 1245
Query: 300 -------------------------------------GSSGLDTFFYYAPSYLYKIYRFE 322
G +G DT F + +
Sbjct: 1246 SVTSDLTVRLGNTGTDRGSVTTEEGGRDTIWSIENFVGGAGDDTIFASDAANVLDGGDGN 1305
Query: 323 NAIIVYDANEHKQDFLSDVE 342
+ + A + D ++ +
Sbjct: 1306 DTFVFETAASAQGDHINGLN 1325
>gi|56681802|gb|AAW21437.1| leukotoxin A [Pasteurellaceae bacterium I26]
Length = 385
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + TI + + + G G+D++ G + ++ GND+ G G D F +
Sbjct: 238 FNGGDGVDTIDDNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQG 297
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
I E + ++ + +D
Sbjct: 298 DGNDSITESEGNDKLSFSDSNLKDL 322
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++++ + GND + G +++ +G+D DG G D
Sbjct: 229 FKGSKFDDAFNGGDGVDTIDDNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKG 288
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ + + + ++ ++L F+D + + +
Sbjct: 289 DDIFVHRQGDGNDSITESE--------GNDKLSFSDSNLKDLTFE 325
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 9/106 (8%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G+S ND+ G+ ++ F G D D + G D F I N
Sbjct: 217 VEEIIGTSHNDIFKGSKFDDAFNGGDGVDTIDDNDGNDRLFGGKGDD---IIDGGNGDDF 273
Query: 328 YDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
D D L D+ R D + L ++ S
Sbjct: 274 IDGG-KGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSN 318
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 15/197 (7%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
++ +G K +G Y + K ++ I + +D+ + N D
Sbjct: 194 KIEYRHGNNKQHVG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFDDAFNGGD----G 243
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTF 307
+I + N + + + G +G+D + G N++ G+D+F G D+
Sbjct: 244 VDTIDDNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQGDGNDSI 303
Query: 308 FYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + N H + E++ Q ++I Y A
Sbjct: 304 TESEGNDKLSFSDSNLKDLTFEKVNHHLVITNTKQEKVTI--QNWFREAEFAKTIHNYVA 361
Query: 367 SYEDLIQVIGQDVFESM 383
+ +D I+ I E +
Sbjct: 362 TRDDKIEEIIGQNGERI 378
>gi|10955283|ref|NP_052624.1| hemolysin A [Escherichia coli O157:H7 str. Sakai]
gi|75994494|ref|YP_325608.1| hemolysin toxin protein [Escherichia coli O157:H7 EDL933]
gi|149930759|ref|YP_001294700.1| w0036 [Escherichia coli]
gi|168763000|ref|ZP_02788007.1| hemolysin [Escherichia coli O157:H7 str. EC4501]
gi|168789921|ref|ZP_02814928.1| hemolysin [Escherichia coli O157:H7 str. EC869]
gi|217329839|ref|ZP_03445914.1| RTX C- domain protein [Escherichia coli O157:H7 str. TW14588]
gi|261225650|ref|ZP_05939931.1| w0036 [Escherichia coli O157:H7 str. FRIK2000]
gi|261257895|ref|ZP_05950428.1| w0036 [Escherichia coli O157:H7 str. FRIK966]
gi|37695747|gb|AAR00409.1|AF401292_10 w0036 [Escherichia coli]
gi|3337015|dbj|BAA31774.1| Hemolysin A [Escherichia coli O157:H7 str. Sakai]
gi|3822162|gb|AAC70116.1| hemolysin toxin protein [Escherichia coli O157:H7]
gi|157688254|gb|ABQ02444.1| enterohemolysin [Escherichia coli]
gi|189366754|gb|EDU85170.1| hemolysin [Escherichia coli O157:H7 str. EC4501]
gi|189370533|gb|EDU88949.1| hemolysin [Escherichia coli O157:H7 str. EC869]
gi|217317070|gb|EEC25503.1| RTX C- domain protein [Escherichia coli O157:H7 str. TW14588]
gi|320187890|gb|EFW62559.1| hemolysin A [Escherichia coli O157:H7 str. EC1212]
gi|326347641|gb|EGD71359.1| hemolysin A [Escherichia coli O157:H7 str. 1044]
Length = 998
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 GQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 57/194 (29%), Gaps = 31/194 (15%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D LS D L+ +Y L G D
Sbjct: 759 QLFGGSGNDKLSG------GDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGID 812
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-----ITHGVKEGR---NPDA 439
EG D YL FG+D ++Y G K R + +
Sbjct: 813 LLDGGEGND-------YL------NGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLSDIS 859
Query: 440 FKALEYIASHEDLI 453
F + + DLI
Sbjct: 860 FDDIAFKRVGNDLI 873
>gi|307308686|ref|ZP_07588385.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|307318820|ref|ZP_07598252.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306895541|gb|EFN26295.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306900891|gb|EFN31501.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 537
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 7/125 (5%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDV 279
I GG D L + + D +T + + I + ++ + +S+ +G+D
Sbjct: 357 IDGGGGSDTLRV-VDPLPGTNFDASTGTLGTTLIFTNIERFELSGGSGNDSIRTLAGDDQ 415
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY----KIYRFENAIIVYDANEHKQ 335
+ GN N+ +GNDV G +G D A + + + F + D +
Sbjct: 416 LAGNDGNDRLDGGAGNDVLWGGAGDDVMTGGAGADTFLWSSDTFSFAGVDRITDFDADGG 475
Query: 336 DFLSD 340
D L
Sbjct: 476 DLLRF 480
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Query: 245 LNTESWSSIGGY--EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
L + SS+ + + + +A + + V SG+D + G + +++ + GNDV G
Sbjct: 261 LIAGNLSSLTAHMGDGDNYVAGGSGRDYVASGSGDDALYGGAGDDILISAGGNDVLAGGD 320
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D + S+ Y D + V F D S ++ L
Sbjct: 321 GNDEIYDGGTSF--------GDGETYIDGGAGDDLIQVVAPSGFIDGGGGSDTLRVVDPL 372
Query: 363 EYT 365
T
Sbjct: 373 PGT 375
>gi|260576621|ref|ZP_05844608.1| hypothetical protein Rsw2DRAFT_2595 [Rhodobacter sp. SW2]
gi|259021106|gb|EEW24415.1| hypothetical protein Rsw2DRAFT_2595 [Rhodobacter sp. SW2]
Length = 714
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 22/123 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G++ T+ D G D +D + G + L++ +
Sbjct: 516 GTSGDDT-------LSGTTAATLLDGLEGFDTVDFSQGQGNLGFDLLDSLT--------- 559
Query: 259 NMTIAQHT----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
T+A T IE+V G +G+D + G+ +N G D G +G DT
Sbjct: 560 -ATMAVGTKVYRSIEAVTGGAGDDTIAGSQDSNRLDGGVGADQLFGRAGDDTLLGGDGDD 618
Query: 315 LYK 317
+
Sbjct: 619 VLS 621
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 10/156 (6%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GG L + G + L+ + +IGG + + + + G +GND + G+
Sbjct: 336 GGVIELFVAGEGTGITRLRLDPGEVAATIGGTDGADLLLGSAANDMITGGTGNDSLKGDL 395
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK----QDFL-- 338
+++ + +G+D G +G D F A I F+ I D + D L
Sbjct: 396 GDDILLDGAGSDSLWGGAGADVFVLAADGVADVIRDFQVGIDRIDLSGWGRVYSVDELRV 455
Query: 339 ---SDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + F + + ++ + I DL
Sbjct: 456 VARTGGATIIFGSETLTVMSANGQPIQPSAFQSRDL 491
>gi|118485900|gb|ABK94796.1| unknown [Populus trichocarpa]
Length = 309
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 58 ALGEWSKVVDLTFEETSIHSD----IKFISSNNG----YVCTPRYDSRYFME----INFD 105
A W+KV TF+E + + I+F S ++G + + + F +++D
Sbjct: 182 AFQTWAKVSKFTFQEATAGASADIVIEFYSGDHGDRYPFDGPGKTLAHAFYPQDGRLHYD 241
Query: 106 KADVWRYGIGKG-TILSHNALHEIGHALGLMHPGSY 140
+ W T L +HEIGH LGL H +
Sbjct: 242 ADENWSTDPAMDQTDLESVTVHEIGHLLGLHHSTDH 277
>gi|149914145|ref|ZP_01902676.1| Hemolysin-type calcium-binding region [Roseobacter sp. AzwK-3b]
gi|149811664|gb|EDM71497.1| Hemolysin-type calcium-binding region [Roseobacter sp. AzwK-3b]
Length = 1425
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 15/143 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G + + + D+P + + + +++++ I L + +S+
Sbjct: 760 GGNNTLDGGD--GFDRLRYDTPLVFGVDANLETGIVEISAFNLNDQRISL--GTINSVDT 815
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ E V G+ G+D + G++ +N +GND+ G D +
Sbjct: 816 VQG---------FEYVRGTFGSDTLTGDANDNRLEGRNGNDILVDGLGSDILIGGEGADF 866
Query: 316 YKIYRFENAIIVYDANEHKQDFL 338
+ I N +I D E D L
Sbjct: 867 FTIVGGGNDVI--DDFEIGVDIL 887
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 71/206 (34%), Gaps = 24/206 (11%)
Query: 196 GAPKGSLG-NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--------DLN 246
G G N+ + I V ++ GG D ++ G V+ + N
Sbjct: 282 GLSLTGTGFNDTFDITVPDDQ---WISVSGGGGADTYIVSGDGLVRLDFRNAVTVEENGN 338
Query: 247 TESWSSIG-----------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ S + G+ I+ I V G+ ND++IG++AN F + G
Sbjct: 339 AQFSSGVSVDLAQGLVLDDGFGNQEVISGTGKIWEVRGTDSNDLIIGSAANESFILARGL 398
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSV 354
D D G D Y E + N +++VE LR ++
Sbjct: 399 DTLDAGDGFDRLRYDRFGVDGITADMEAGTVAGIWDNSLFAHKITNVEYLRGSNGDDVIG 458
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVF 380
+ +LE + + I GQD+
Sbjct: 459 DSSGNDVLEGRSGSDFFILSGGQDII 484
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 4/123 (3%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKD--SPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
I KI+ + I + + + T+ G D L G D+
Sbjct: 365 ISGTGKIWEVRGTDSNDLIIGSAANESFILARGLDTLDAGDGFDRLRYDRFGVDGITADM 424
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + I ++ ++ + T +E + GS+G+DV+ +S N+V SG+D F S G D
Sbjct: 425 EAGTVAGI--WDNSLFAHKITNVEYLRGSNGDDVIGDSSGNDVLEGRSGSDFFILSGGQD 482
Query: 306 TFF 308
Sbjct: 483 IIR 485
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 11/167 (6%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN-NVF 289
+D T G +DL +W++ + + I + + GS G+D ++ A+ +
Sbjct: 157 IDATDPFGPGQALDL--TTWANT--VQGPLLIQGTDGGDLLYGSIGDDSIVSGDADSDNI 212
Query: 290 FESSGNDVFD--GSSGLDTF----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
S GND D G + D F + + + E D + D L V+
Sbjct: 213 TASEGNDTIDLSGMNLNDAFALLDYRRLDAGITATIDGEANTGTIDKGINGVDTLVGVQN 272
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
A + +++ + Q I + G
Sbjct: 273 PMIAGFNLGGLSLTGTGFNDTFDITVPDDQWISVSGGGGADTYIVSG 319
>gi|32033986|ref|ZP_00134242.1| COG2931: RTX toxins and related Ca2+-binding proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 1676
Score = 60.9 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 253 IGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + + I +++VI+ +GND + G+ ++ +GND+ GS G DT+ +
Sbjct: 1224 LFGTDGDDDINDWGRNSVID---AGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLF 1280
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
IY + ++ + D++ L+F D V ++ Y
Sbjct: 1281 SKGHGQDVIYEYSDSA----------NSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYH 1330
Query: 370 D 370
D
Sbjct: 1331 D 1331
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 253 IGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + + I +++VI+ +GND V G + ++ GND+ G G DT+ +
Sbjct: 1499 LFGTDGDDNINDWGRNSVID---AGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIF 1555
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+Y + + + D++ L+F D + +
Sbjct: 1556 SKGHGQDIVYE----------DTNNDNRARDIDTLKFTDINLSEL 1590
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 9/137 (6%)
Query: 242 YID-LNTESWSSIGGYEKNMTIA----QHTVI---ESVVGSSGNDVVIGNSANNVFFESS 293
YID + + N+TIA + + G N++++G+ +N S+
Sbjct: 1050 YIDYAKAQGFYENWAATSNLTIARLREAGVIFAESTDLKGDEKNNILLGSQKDNNLSGSA 1109
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D+ G G DT + Y + ++Y+ ++ SD++ L+F D
Sbjct: 1110 GDDLLIGGEGNDTLKGSYGADTYLFSKGHGQDVIYEYSDSAN-SKSDIDTLKFTDVNYAE 1168
Query: 354 VNVKQRSILEYTASYED 370
V ++ Y D
Sbjct: 1169 VKFRRVGDDLMLFGYHD 1185
Score = 46.7 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 261 TIAQHTVIE---SVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+I++ +I+ + G+ GND + + +++ GND+ GS G DT+ +
Sbjct: 1357 SISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGSYGADTYIFSKGHGQD 1416
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
IY + ++ + D++ L+F D V ++ Y D
Sbjct: 1417 VIYEYSDSA----------NSKRDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHD 1460
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 15/87 (17%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
++ + GDD ++ G + ID N T+ ++++G GND++
Sbjct: 1498 ALFGTDGDDNINDW---GRNSVID----------AGAGNDTVNGGNGDDTLIGGKGNDIL 1544
Query: 281 IGNSANNV--FFESSGNDVFDGSSGLD 305
G + F + G D+ + D
Sbjct: 1545 RGGYGADTYIFSKGHGQDIVYEDTNND 1571
>gi|303253084|ref|ZP_07339234.1| RTX-III toxin determinant A from serotype 8 [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248361|ref|ZP_07530384.1| Hemolysin, plasmid [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|302648069|gb|EFL78275.1| RTX-III toxin determinant A from serotype 8 [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855099|gb|EFM87279.1| Hemolysin, plasmid [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
Length = 1050
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 17/130 (13%)
Query: 199 KGSLGNNI-YKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ G++I Y + + +Y GDD L L G NY + G
Sbjct: 762 NGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKL---LGGNGNNY----------LSG 808
Query: 256 YEKNMTI-AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ N + + G G+D + G+S +++ GND +G G D + Y + S
Sbjct: 809 GDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSG 868
Query: 315 LYKIYRFENA 324
+ IY A
Sbjct: 869 NHTIYDQGKA 878
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D++ GN +++ + GND G +G D + N +
Sbjct: 750 DIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGGNGNNYLSGG 809
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D N+ Q + LR +L+ + L G D
Sbjct: 810 DGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSD 859
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 49/148 (33%), Gaps = 7/148 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + + + + + G GND + G++ N+ + G+D G +G +
Sbjct: 752 FHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGGNGNNYLSGGDG 811
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ ++ + K S + L + Y ++ +
Sbjct: 812 NDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHT 871
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFD 400
+S K + D++FD
Sbjct: 872 IYDQGKASDSDKLYLS-------DLSFD 892
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 2/134 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS D+ G +++ + G+D+ G G D + ++ ++
Sbjct: 741 DEFKGSKFRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGG 800
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHF 386
+ N + + E + K L ++ + L G D E F
Sbjct: 801 NGNNYLSGGDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDF 860
Query: 387 YEFGLSEGRDITFD 400
Y + + G +D
Sbjct: 861 YVYRSTSGNHTIYD 874
>gi|302856711|ref|XP_002959689.1| hypothetical protein VOLCADRAFT_101201 [Volvox carteri f.
nagariensis]
gi|300254617|gb|EFJ39246.1| hypothetical protein VOLCADRAFT_101201 [Volvox carteri f.
nagariensis]
Length = 591
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G+SGNDV+ G +A N +GND G G D F + + + V
Sbjct: 105 DTINGTSGNDVLTGTNAANKIVGGTGNDRIAGKLGSDALFGGTGADTFVFDTALGSSNV- 163
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-----TASYEDLIQVIGQDVFESM 383
+ DF ++++ + S+ V+ + A + D I + +
Sbjct: 164 ---DSLMDFTPGTDKIQLSSDIFKSLWVQALGTDVFKVGTAAADHNDHIVYNQTTGGKGV 220
Query: 384 KHFYEFGLSEGRD 396
+ GRD
Sbjct: 221 AD--DGAHDGGRD 231
>gi|168750734|ref|ZP_02775756.1| hemolysin [Escherichia coli O157:H7 str. EC4113]
gi|168757314|ref|ZP_02782321.1| hemolysin [Escherichia coli O157:H7 str. EC4401]
gi|168769222|ref|ZP_02794229.1| hemolysin [Escherichia coli O157:H7 str. EC4486]
gi|168769332|ref|ZP_02794339.1| hemolysin [Escherichia coli O157:H7 str. EC4486]
gi|168776705|ref|ZP_02801712.1| hemolysin [Escherichia coli O157:H7 str. EC4196]
gi|168783053|ref|ZP_02808060.1| hemolysin [Escherichia coli O157:H7 str. EC4076]
gi|168802569|ref|ZP_02827576.1| hemolysin [Escherichia coli O157:H7 str. EC508]
gi|195940107|ref|ZP_03085489.1| hemolysin A [Escherichia coli O157:H7 str. EC4024]
gi|208811292|ref|ZP_03253052.1| RTX domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208817372|ref|ZP_03258401.1| hemolysin [Escherichia coli O157:H7 str. EC4045]
gi|208823372|ref|ZP_03263689.1| hemolysin [Escherichia coli O157:H7 str. EC4042]
gi|209395598|ref|YP_002268404.1| RTX C- domain protein [Escherichia coli O157:H7 str. EC4115]
gi|254667466|ref|YP_003082152.1| hemolysin toxin protein [Escherichia coli O157:H7 str. TW14359]
gi|157688264|gb|ABQ02449.1| enterohemolysin [Escherichia coli]
gi|187767936|gb|EDU31780.1| hemolysin [Escherichia coli O157:H7 str. EC4196]
gi|188015113|gb|EDU53235.1| hemolysin [Escherichia coli O157:H7 str. EC4113]
gi|188999577|gb|EDU68563.1| hemolysin [Escherichia coli O157:H7 str. EC4076]
gi|189355643|gb|EDU74062.1| hemolysin [Escherichia coli O157:H7 str. EC4401]
gi|189361601|gb|EDU80020.1| hemolysin [Escherichia coli O157:H7 str. EC4486]
gi|189361721|gb|EDU80140.1| hemolysin [Escherichia coli O157:H7 str. EC4486]
gi|189375462|gb|EDU93878.1| hemolysin [Escherichia coli O157:H7 str. EC508]
gi|208729922|gb|EDZ79139.1| RTX domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208730549|gb|EDZ79248.1| hemolysin [Escherichia coli O157:H7 str. EC4045]
gi|208736967|gb|EDZ84652.1| hemolysin [Escherichia coli O157:H7 str. EC4042]
gi|209157053|gb|ACI34487.1| RTX C- domain protein [Escherichia coli O157:H7 str. EC4115]
gi|254595818|gb|ACT75178.1| hemolysin toxin protein [Escherichia coli O157:H7 str. TW14359]
gi|326337143|gb|EGD60979.1| hemolysin A [Escherichia coli O157:H7 str. 1125]
Length = 998
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 GQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 57/194 (29%), Gaps = 31/194 (15%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D LS D L+ +Y L G D
Sbjct: 759 QLFGGSGNDKLSG------GDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGID 812
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-----ITHGVKEGR---NPDA 439
EG D YL FG+D ++Y G K R + +
Sbjct: 813 LLDGGEGND-------YL------NGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLSDIS 859
Query: 440 FKALEYIASHEDLI 453
F + + DLI
Sbjct: 860 FDDIAFKRVGNDLI 873
>gi|157688244|gb|ABQ02439.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFES 382
D LS + L + +IL + L I
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 RQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
>gi|153971525|ref|YP_001393065.1| RTX toxin RtxA [Vibrio vulnificus]
gi|153971721|ref|YP_001393222.1| RTX toxin RtxA [Vibrio vulnificus]
gi|152955047|emb|CAL25399.1| RTX toxin RtxA [Vibrio vulnificus]
gi|152955206|emb|CAL25556.1| RTX toxin RtxA [Vibrio vulnificus]
gi|221327945|gb|ACM17708.1| RTX toxin RtxA [Vibrio vulnificus]
Length = 4595
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 66/221 (29%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+L+ +++ + GG K++ + G G+DV +N
Sbjct: 4218 DFLRNSGHLQGDGDINLSLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGTSN 4276
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 4277 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 4335
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ S G D+
Sbjct: 4336 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGDDFANVFGNYNRINASAGNDVV 4395
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N + AA + EGR+
Sbjct: 4396 -----KLMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4431
>gi|148643381|ref|YP_001273894.1| glycosyl transferase [Methanobrevibacter smithii ATCC 35061]
gi|148552398|gb|ABQ87526.1| predicted glycosyltransferase, GT2 family [Methanobrevibacter
smithii ATCC 35061]
Length = 533
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 18/103 (17%)
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D A ++Y +G E F Y +++D + G H+ GY E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDD----------VKGDGLTHYLVKGYLE 62
Query: 562 GR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
GR S+ F+PD Y +Y D+ + HYI HG EG
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEG 101
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D ++MK++ +G E FD Y +YDD++ G HY+ G EGR
Sbjct: 13 NFDFRKAMKNYKYYGAIE-ESGLFDEKFYSKTYDDVK-------GDGLTHYLVKGYLEGR 64
Query: 436 NPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
P F Y ++ D+ A + H+ G +EG+ +
Sbjct: 65 LPSLDFDPDFYNNNYPDVHRAQLNP-------LLHYIAHGKDEGKIFQYA 107
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 18/105 (17%)
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D A ++Y +G E F Y +++D+ G H+ G
Sbjct: 14 FDFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDVK----------GDGLTHYLVKGYL 61
Query: 477 EGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
EGR + FD Y +Y D+ + HYI HG EG+
Sbjct: 62 EGRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEGK 102
>gi|6573493|pdb|1QIB|A Chain A, Crystal Structure Of Gelatinase A Catalytic Domain
Length = 161
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 47/154 (30%), Gaps = 41/154 (26%)
Query: 58 ALGEWSKVVDLTFEET-SIHSDIKFISS----NNGY---------VCTPRYDSRYFMEIN 103
A WS V L F +DI +GY + + +
Sbjct: 33 AFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSH 92
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FD ++W G G G L A HE GHA+GL H
Sbjct: 93 FDDDELWSLGKGVGYSLFLVAAHEFGHAMGLEHSQDPGALMAPI---------------- 136
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
Y ++ + DI +Q++YGA
Sbjct: 137 -YTYTKNFRLSQ----------DDIKGIQELYGA 159
>gi|308462987|ref|XP_003093772.1| hypothetical protein CRE_24781 [Caenorhabditis remanei]
gi|308249378|gb|EFO93330.1| hypothetical protein CRE_24781 [Caenorhabditis remanei]
Length = 281
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 55/156 (35%), Gaps = 28/156 (17%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---- 72
++R + W + + ++ + T + + D+ + + A EWS V L F E
Sbjct: 43 VIRAKRWRKHTLTWQ--LQTQNLMDADVYIV----RNTMHRAFNEWSTVSSLEFREIPPE 96
Query: 73 --------------TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
HSD +G V Y ++FD + W +G
Sbjct: 97 LVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDG--RLHFDAEEQWSLNSQEGV 154
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
L A+HEIGH LGL H + Y+
Sbjct: 155 NLFQTAVHEIGHLLGLEHSMDIRAAM--FAAKRPYD 188
>gi|157688252|gb|ABQ02443.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFES 382
D LS + L + +IL + L I
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 25/151 (16%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTIAQHTV 267
K F + + G+D ++ G + Y D + S + G N ++
Sbjct: 716 KGGKFNDIFHGADGNDYIEG-NYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDG 774
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFY 309
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 775 NNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVY 834
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ I ++ D ++
Sbjct: 835 RQNYGHHTIADEGGKGDRLHLSDISFDDIAF 865
>gi|88809711|ref|ZP_01125218.1| putative hemolysin-adenlyate cyclase protein [Synechococcus sp. WH
7805]
gi|88786461|gb|EAR17621.1| putative hemolysin-adenlyate cyclase protein [Synechococcus sp. WH
7805]
Length = 1267
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Query: 215 DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G+D L D+ L G + ID + + G N I
Sbjct: 523 ARKGNDNVDGGAGNDTLRGDSGNDIVLGGEGNDKID-GGGNADVLSGGIGNDFITGRNGA 581
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +G+D ++GN+ N+ F S+GND +G DT Y + +
Sbjct: 582 DLIDGGTGDDTLLGNAGNDTIFGSTGNDRINGGGRNDTLDYSNLGGAVTLGGSGD 636
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 96/268 (35%), Gaps = 11/268 (4%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLD--LTLIGGVKNYIDLNTESWS-SIGGYEKNM 260
+ + + + I ++ + +D L G ++L E+ + ++
Sbjct: 653 DQLVGESTAPFTNTIEKIIGNANFTNTIDGQLNAAGNGSFVVNLAEETLTVNVNTTNVGP 712
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
Q ++VVG+ +D+++GN NNVF SSG D+ DG G DT Y +
Sbjct: 713 FNFQVVNFDNVVGTDNSDLIVGNDNNNVFTGSSGFDLLDGGDGFDTADYSGLDTDITL-- 770
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
NA + D + D L + + ++++ I + +A +
Sbjct: 771 --NATGLVDKGDLGLDLLRSINEVVADAGQTNTIDAAFGEISQISADLGAGTLEVALFTP 828
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
F++ + +F+S GS D FG+ A Y G + F
Sbjct: 829 NVGPLFFDVANFDDVRGSFNSDFITGSATD-NVFFGTTGNDA---YDGAGGVNTLDYSNF 884
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKD 468
+ D+ DA + +G D
Sbjct: 885 GGAVTLGGSGDIAKGVVDAAGIGSLGND 912
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 5/168 (2%)
Query: 210 EVQQKDSPFIQTIY-DSGGDDLLD--LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ IQTI D+ + +D L G +DL+ E + +
Sbjct: 908 SLGNDTIANIQTIIGDANFTNTIDGELNAAGNGSFVVDLSQELLTVNISTPGVGPFTFNV 967
Query: 267 V-IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++V G+ D + GN +NVF S+GNDVF+GS G DT Y +
Sbjct: 968 ENFDNVDGTDNTDNIKGNDNDNVFGGSAGNDVFNGSGGTDTIDYTGLGAGVTLAATGFVR 1027
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+D ++VER+ AD + + + DL
Sbjct: 1028 KGGVLGGLGEDNFTNVERIV-ADATQVNTIDGEVPGGATASLAVDLAA 1074
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 50/159 (31%), Gaps = 10/159 (6%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ G L + + +D +++S + G I + G G+D++
Sbjct: 465 DAEGFQSLIVDISTPTVGPLDFALQNFSDVIGTGAADIIRGSDSANFLAGEGGDDIIFAR 524
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N+ +GND G SG D + KI NA ++ DF++
Sbjct: 525 KGNDNVDGGAGNDTLRGDSGNDIVLGGEGND--KIDGGGNADVLSGGI--GNDFITGRNG 580
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L A + + G D
Sbjct: 581 ADLIDGGTGD------DTLLGNAGNDTIFGSTGNDRING 613
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 10/162 (6%)
Query: 219 IQTIYDSG-GDDLLDLTLIGGVKNY--IDLNTE--SWSSIGGYEKNMTIAQHTVIESVVG 273
+TI S G + +D TL + N +DL+ + I E + T V+G
Sbjct: 11 FETIVGSDSGTNTIDGTLDEQLSNVYDVDLSQGLLTVGDINDPEGDRTF-NVVNFTDVIG 69
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFENAIIVYDAN 331
+ +DV++G+ N F S GND FDG G DT + A K+ I +D
Sbjct: 70 TVNDDVIVGSDVANTFGGSLGNDFFDGGEGFDTVDFSAVKDNLDSKVTLNAGGTIEFDGP 129
Query: 332 EHKQDF--LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
L ++E++ + + + + +L
Sbjct: 130 FGVTSTSQLFNIEKIVGSAGSTNDLINAATDVPNKAFINVNL 171
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 5/164 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + G L+ + S+I G + N + + + G +G D + G++ +
Sbjct: 1094 FNFDNVVGTDVADTLSGDDGSNIIAGEDGNDVLNGRGGADILTGGAGADEINGDAGADNL 1153
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD- 348
GND G G D + + I D E + FA
Sbjct: 1154 VGGVGNDSLFGGEGNDVINGVGTDFGANDFDQLTGGIGEDLFVLGSADQVFYEGIGFAQI 1213
Query: 349 ---QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + +Y S + I G + ++ +F
Sbjct: 1214 LDFETGVDTIQLSGAFGDYNFSNNNTITQNGDLIATTIGNFNVA 1257
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 28/156 (17%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI------------------- 268
+DL++ K +I++N S GG N I Q I
Sbjct: 152 NDLINAATDVPNKAFINVNLGS----GGVTANSGILQINFIDPLLPFIPESGQLTFDIEN 207
Query: 269 -ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
E+V G+ +D +IG+ N FF S D ++G G DT Y + + IV
Sbjct: 208 FENVRGTDNSDTIIGSDGANTFFGSGEFDFYNGGLGFDTLDYS--DLGAAVTLGGSGSIV 265
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D E QD + ++ER+ ++++ + S
Sbjct: 266 KD--ELGQDQILNIERIIADGSFTNTIDGELNSAGN 299
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I+ ++ ++ G + T++ + G GNDV+ G ++ +G D +G +
Sbjct: 1089 INFEVFNFDNVVGTDVADTLSGDDGSNIIAGEDGNDVLNGRGGADILTGGAGADEINGDA 1148
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G D + + I + DF
Sbjct: 1149 GADNLVGGVGNDSLFGGEGNDVINGVGTDFGANDF 1183
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++VVG+ ND +IGN +N F S+G+D G G DT Y + +
Sbjct: 341 DNVVGTVNNDSIIGNDDDNDFTGSTGDDTISGLGGNDTVDYSELEGALTLGGSGD 395
>gi|332711478|ref|ZP_08431409.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332349456|gb|EGJ29065.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 296
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ +GGDD L + TL G N + G+ N + + ++++G
Sbjct: 36 WTMTGNGGDDTLIGGPKNDTLYGNSGNDKLYGEGGNDYLDGWTGNDNMYGGSGNDTLLGY 95
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D + GNS N+ + SGND DG +G D + + + Y + Y +
Sbjct: 96 SGHDNLYGNSGNDKLYGESGNDYLDGWTGNDNMYGGSGNDTLLGYSGND----YLSGSSG 151
Query: 335 QDFLSD 340
D L
Sbjct: 152 HDSLKG 157
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 67/213 (31%), Gaps = 30/213 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIG-------------GVKNYIDLNTESWSS-IGG 255
+ +Y GG+D LD G + +L S + + G
Sbjct: 53 NDTLYGNSGNDKLYGEGGNDYLDGWTGNDNMYGGSGNDTLLGYSGHDNLYGNSGNDKLYG 112
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + T +++ G SGND ++G S N+ SSG+D G SG DT +
Sbjct: 113 ESGNDYLDGWTGNDNMYGGSGNDTLLGYSGNDYLSGSSGHDSLKGESGHDTLLGGTGTDT 172
Query: 316 YKIYRFENAIIVYDANEHKQDFLSD---------VERLRFADQCIDSVNVKQRSILEYTA 366
+ + Y + D LS AD + + A
Sbjct: 173 LVGGSGNDILNGYGGTIGEYDILSGDYSSSQPGVQGSYDGADTFVLGNAFGAFYLGSGYA 232
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ D G F +G + ++F
Sbjct: 233 TITDFYWSEGDK-------FEVYGSASDYSLSF 258
>gi|194382744|dbj|BAG64542.1| unnamed protein product [Homo sapiens]
Length = 305
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 52/189 (27%), Gaps = 49/189 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T ++ + + A WS L F S +DI
Sbjct: 43 WERTNLTYRIRNYTPQLSEAEV-------ERAIKDAFELWSVASPLIFTRISQGEADINI 95
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+N P + +FD + W L A HE
Sbjct: 96 AFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYN-LFLVAAHEF 154
Query: 129 GHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H YP Y ++ S+ D
Sbjct: 155 GHSLGLAHSSDPGALMYPNYAF-----RETSNYSLP---------------------QDD 188
Query: 188 IVAVQKIYG 196
I +Q IYG
Sbjct: 189 IDGIQAIYG 197
>gi|158337649|ref|YP_001518824.1| VCBS [Acaryochloris marina MBIC11017]
gi|158307890|gb|ABW29507.1| VCBS [Acaryochloris marina MBIC11017]
Length = 2531
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---- 308
I N TI+ + E++ GND +IGN N+ G D+ +G +G D
Sbjct: 2014 IKTNGGNDTISGSSQAENIDAGEGNDSLIGNDGNDTLIGGLGADILEGGAGDDVLIDGVS 2073
Query: 309 -YYAPSYLYKIYRFENAIIVYDANEHK 334
S R +A +
Sbjct: 2074 NGAINSDAIAFGRIISATTAFTLANGG 2100
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 247 TESWSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + I + + + +S +D++IG + N+ +GND+ G + D
Sbjct: 2393 PRQLADVNGDGQADVIGFGESQVIVSLSNSVDDILIGGTGNDRLVGGAGNDILTGGADAD 2452
Query: 306 TFFY------YAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
TF + + + II LSD+
Sbjct: 2453 TFAFAGLAATGGIDRITDFNANQGDIIEISQASFGVTSLSDI 2494
>gi|329848649|ref|ZP_08263677.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843712|gb|EGF93281.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 515
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+Y G D + + G I +N + ++ Y I + E+ +G++
Sbjct: 75 GNDVLYGGSGFDTVSFADLNG---RISVNLGNGNAQNNYTGGRDII--SQFENAIGTAFE 129
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D ++G+S N +G D G G DT LY I ++ ++ +A D
Sbjct: 130 DTLMGSSTGNRLEGGAGRDWLYGRGGADTLVGGTGDDLYFI--LDDGDVIIEAEGEGDDS 187
Query: 338 LS 339
L
Sbjct: 188 LH 189
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 46/127 (36%), Gaps = 2/127 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + ++ +++ G GND ++G + + +GND+ G D + +
Sbjct: 24 TYDGTAEADSVTGGDGNDTLSGGDGNDTLLGGNGADSLSGGAGNDLVLAGLGNDVLYGGS 83
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I V N + Q+ + + Q +++ L +++ L
Sbjct: 84 GFDTVSFADLNGRISVNLGNGNAQNNYTGGRDI--ISQFENAIGTAFEDTLMGSSTGNRL 141
Query: 372 IQVIGQD 378
G+D
Sbjct: 142 EGGAGRD 148
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 40/122 (32%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S G + T + G+S + GNS NN + G+D G G DTF +
Sbjct: 390 SFFGRAAEVLTLTGTGNINGTGNSLANTHTGNSGNNGLDGAGGHDTLTGGDGADTFLFLT 449
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S + F A +++ + + +I A+ D+
Sbjct: 450 ASGKDTLTDFSAAQNDTINVNAYTGGVANNSLVAQVGGNVVIAFSASNTITVIGATQADV 509
Query: 372 IQ 373
+
Sbjct: 510 LA 511
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Query: 227 GDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
GDD ++ G + L T S+ G + I T S+ G+S N+ +
Sbjct: 277 GDDTYNVRSAGDRVYELHGEGTDTLVTLFSYSLFGRAIEIVIMDGTDDLSITGNSLNNTI 336
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
GN+ NN + G D G G DT++ ++ V+ +
Sbjct: 337 TGNAGNNWIDGAGGGDKMTGGLGDDTYYVDNIYDNVAELHWQGTDTVFSS 386
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 4/115 (3%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++GN NN ++G+D F G +G D + + + +
Sbjct: 215 IVGNDLNNSMIGNNGSDTFFGGAGDDRLLTSGGGNDVMDGGAGDDYLAGSPDWGEARLTG 274
Query: 340 ----DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D +R A + ++ + L SY + I + + G
Sbjct: 275 GLGDDTYNVRSAGDRVYELHGEGTDTLVTLFSYSLFGRAIEIVIMDGTDDLSITG 329
>gi|212378958|gb|ACJ24812.1| matrix metalloproteinase [Pinus taeda]
Length = 364
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 43/158 (27%)
Query: 58 ALGEWSKVVDLTFEETSIH--SDIK--FISSNNG----YVCTPRYDSRYFMEI----NFD 105
A W+ V+ +TF E+S + +DIK F S ++G + + F + D
Sbjct: 190 AFKRWADVIPITFTESSDYSSADIKVGFYSGDHGDGHPFDGPLGTLAHSFSPPDGRFHLD 249
Query: 106 KADVWRYGIGKGT-----ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
A+ W + + L A HEIGH LGL H +
Sbjct: 250 AAESWTVDLSSDSAATAIDLESIATHEIGHLLGLGHT-------------------TEKA 290
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+VM + + ++ D+ VQ +YGA
Sbjct: 291 AVMYPSIAPRTRK-------VDLVLDDVDGVQYVYGAN 321
>gi|170107951|ref|XP_001885185.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640026|gb|EDR04294.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1546
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 34/111 (30%), Gaps = 6/111 (5%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHSD------IKFISSNNGYVCTPRYDSRYFME 101
N N Q + + EWSK ++ F+ + S I F S+ +
Sbjct: 202 NANQQAKVKNTVQEWSKYANVKFQNVAYDSTKPADLRITFNPSSGSWCYVAEELKNVPAN 261
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ LHE GHALG +H ++ D
Sbjct: 262 QPTTNLGWIDPSSITTSDDIGVILHEFGHALGFLHEHQSPARGGTLTLNRD 312
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 41/188 (21%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFIS---------------S 84
++ N ++ R + V+L EE + + + I+ S
Sbjct: 520 VSPSNERRKQRVRDTFAVYQNYVNLKIEEVAYNRKSPALIRISFGPVPDSSSWSCVGTES 579
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH-----NALHEIGHALGLMHPGS 139
++G + +E D + T HEIGHALGL+H
Sbjct: 580 SDGRTFKAQSLYGGLLETTMMFWDTHVPELLPSTQKGQDKETYTLFHEIGHALGLIHEH- 638
Query: 140 YNGGYPVYGVDNDYENDSFLT------SVMSYFMPQDSMMDASFG------YCATPMVSD 187
+ +D + + F+ S+M Y P+ S+ ++ TP D
Sbjct: 639 --VSPKSFTMDERDKLNFFIYTPFDDKSIMLY--PEKSLRGSTLFNILLTDLNPTPSKRD 694
Query: 188 IVAVQKIY 195
+ IY
Sbjct: 695 FALLGAIY 702
>gi|317419524|emb|CBN81561.1| Matrix metalloproteinase-21 [Dicentrarchus labrax]
Length = 685
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 46/182 (25%)
Query: 45 TELN-PNAQEVARWALGEWSKVVDLTFEETSIHS----DIKFISS-------NNGYVCTP 92
++L+ + + + R A WS+V L F E + DI+ N + +
Sbjct: 301 SQLSVEDQRYIFRLAFRMWSEVSPLEFVEDTHSPLEDVDIRLGFGTGRHLGCNQRFDGSG 360
Query: 93 R-YDSRYF-MEINFDKADVWR-YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + +F +I+FD + + G G L A+HEIGH LGL P Y G
Sbjct: 361 QEFAHAWFLGDIHFDDDEHFTGPNAGSGISLLKVAVHEIGHVLGL--PHIYRPG------ 412
Query: 150 DNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
S+M SY P +S + + D A+Q +YG KG N ++
Sbjct: 413 -----------SIMQPSYL-PHESGFEVDWT--------DRKAIQHLYGGCKGPF-NTVF 451
Query: 208 KI 209
Sbjct: 452 DW 453
>gi|262092792|gb|ACY25770.1| alkaline metalloprotease [uncultured bacterium]
Length = 65
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + ++D GG D LD + +DLN ES+S +GG + N++IA
Sbjct: 12 MSLTSARDKPVFCVWDDGGVDTLDFSGFS-QDQKVDLNAESFSDVGGLKGNVSIA 65
>gi|149204803|ref|ZP_01881766.1| calcium binding hemolysin protein, putative [Roseovarius sp.
TM1035]
gi|149141772|gb|EDM29825.1| calcium binding hemolysin protein, putative [Roseovarius sp.
TM1035]
Length = 756
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 4/134 (2%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + I + I G N I ++ + + GNDVV ++
Sbjct: 495 TGAGSTLTAAEIVIIERETPLNQITGSTGNDLITGRSIGDEITALEGNDVVGARGGDDQV 554
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
F +GND+ DG SG D+ + A A+ D + ++ +
Sbjct: 555 FGGAGNDILDGGSGSDSVWGEAGDD----VLIGGALRDVLFGSAGNDLIIGIDIQLGSGS 610
Query: 350 CIDSVNVKQRSILE 363
D
Sbjct: 611 AADIAAQGLDPATP 624
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 13/105 (12%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + + G DL+D + +G I N IA +
Sbjct: 268 DDSSTESGLNILRGTNGADLIDGSNVGDE-------------ITARGGNDLIASGGGRDE 314
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
V GNDVV G +A ++ + GNDV G +G D+ + L
Sbjct: 315 VFAGDGNDVVFGGNAADILWGGVGNDVVIGGAGGDSLQGNSGDDL 359
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 34/92 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + + T ++ ++G SG D + G+ ++V G+D+ +G +G D
Sbjct: 68 VSAGGGDDFVQGGTGVDIILGGSGADTLSGDGGDDVLIGGRGDDLIEGGAGDDVLIGIDG 127
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ N +I + ++
Sbjct: 128 GLNSQTGDELNRLIQSNPTIDALRPSIGTDQH 159
Score = 40.5 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY---APSYLYKIYRFENAI 325
SG+D ++G S N+V G+D G G D F+ + I +E A+
Sbjct: 401 SGDDTLLGGSGNDVLV-IGGDDTATGGLGADRFWLGEWVGGADTATITDYEPAV 453
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 37/107 (34%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ D + +++ G+D G +G+D + + ++ +I ++
Sbjct: 52 GTARADEITARGGDDIVSAGGGDDFVQGGTGVDIILGGSGADTLSGDGGDDVLIGGRGDD 111
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D + + +++ + + L IG D
Sbjct: 112 LIEGGAGDDVLIGIDGGLNSQTGDELNRLIQSNPTIDALRPSIGTDQ 158
>gi|119492804|ref|ZP_01623890.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Lyngbya sp.
PCC 8106]
gi|119452957|gb|EAW34129.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Lyngbya sp.
PCC 8106]
Length = 447
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
Q S I + G+D + + GG I G + N I
Sbjct: 255 GGNDQATGSSIADVINGNQGNDTI--SGEGGDD-----------YIFGGQDNDLINGGDG 301
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ V G+ G DV+ G + ++ NDV +G G D S + ++
Sbjct: 302 NDIVNGNRGQDVISGGNGDDFIRGGQDNDVLNGDGGNDYLIGDLGSDTMTGGVGADTFML 361
Query: 328 YDANEHKQDFLSDVERL 344
+ V+R+
Sbjct: 362 RVDESAGVRDFNAVDRI 378
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 9/150 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE----SWSSI----GGY 256
N + + +D+ + + I L + SSI G
Sbjct: 213 NTVNLTSLPLNFSLFPNDFDADNQVTITPEDAQQATSGILLRGGNDQATGSSIADVINGN 272
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N TI+ + + G ND++ G N++ + G DV G +G D + +
Sbjct: 273 QGNDTISGEGGDDYIFGGQDNDLINGGDGNDIVNGNRGQDVISGGNGDDFIRGGQDNDVL 332
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N ++ D +
Sbjct: 333 N-GDGGNDYLIGDLGSDTMTGGVGADTFML 361
>gi|242278270|ref|YP_002990399.1| hypothetical protein Desal_0794 [Desulfovibrio salexigens DSM 2638]
gi|242121164|gb|ACS78860.1| hypothetical protein Desal_0794 [Desulfovibrio salexigens DSM 2638]
Length = 677
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 25/175 (14%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-KNMTIAQHTVI---ES 270
S ++T Y S G D + G +Y+D + + ++GG + + I +
Sbjct: 457 GSGAVETFYGSSGSDEMSGGGSGNWLSYVDGSNGVFINLGGGSVTKIGTSDSDTIYDFDH 516
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGS------------------SGLDTFFYYAP 312
+G++ D + GNS++N +G D DG G DT +
Sbjct: 517 AIGTNNADTLTGNSSSNTLMGGAGADNLDGGGGNDILIGGTGIDKLTGGLGADTLTGGSD 576
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ Y Y + + D DF + V++++ + V Q +S
Sbjct: 577 TADYFFYYNSTSAYLGDT---ITDFQTTVDKIKVNSSAFTTTTVVQDPGYATESS 628
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 5/106 (4%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-----IV 327
G+ GND + G+ N+V + GND G G DT + +
Sbjct: 370 GNGGNDTIFGDKGNDVLYGGIGNDTVSGGDGSDTLAGGDGIDILSFEDNSAGVDACLSSG 429
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + D+ + E ++ + ++ +++
Sbjct: 430 TAVSNGEIDYFTGFEAIKGSSHDDFLYGSGAVETFYGSSGSDEMSG 475
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 64/196 (32%), Gaps = 16/196 (8%)
Query: 199 KGSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSS 252
KG++ + Y +Y G+D + D + + ID+ + +S
Sbjct: 360 KGTINVDYYDGNGGNDTIFGDKGNDVLYGGIGNDTVSGGDGSDTLAGGDGIDILSFEDNS 419
Query: 253 IG--------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
G N I T E++ GSS +D + G+ A F+ SSG+D G
Sbjct: 420 AGVDACLSSGTAVSNGEIDYFTGFEAIKGSSHDDFLYGSGAVETFYGSSGSDEMSGGGSG 479
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ + ++ V D + D + + + L
Sbjct: 480 N--WLSYVDGSNGVFINLGGGSVTKIGTSDSDTIYDFDHAIGTNNADTLTGNSSSNTLMG 537
Query: 365 TASYEDLIQVIGQDVF 380
A ++L G D+
Sbjct: 538 GAGADNLDGGGGNDIL 553
>gi|119486359|ref|ZP_01620418.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119456572|gb|EAW37702.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 476
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L ++ I G N I + + G+SGND + GN+ N+ +G+D GS G
Sbjct: 13 LRGTRFADEILGKAGNDEIIGRGGDDLLRGNSGNDTLSGNAGNDTLDGGNGDDELIGSRG 72
Query: 304 LDTFFYYAPSYLYKIYRFE-----NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DT A+ V D QD + ++E + A+ + ++
Sbjct: 73 NDTLDGGDGVDTANYSELGEVITLQAVGVVDKGNAGQDQIENIEAIIGANGQDNIIDGTV 132
Query: 359 RS 360
Sbjct: 133 SG 134
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 9/146 (6%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSSIG-GYEKNMT 261
+ K Q I+ I + G D + ++ G IDL+ ES + ++
Sbjct: 102 VDKGNAGQDQIENIEAIIGANGQDNIIDGTVSGGGTSAFDIDLSEESLTVTNIPGLGDVN 161
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +V+G+S D + G+S N F S GND +DG G DT Y + R
Sbjct: 162 FTVENFV-NVIGTSNTDTITGDSNENEFGGSRGNDSYDGKGGNDTVDYSDLGQAVTLERG 220
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFA 347
V + D + ++E + A
Sbjct: 221 G----VVNKGSAGTDRIVNIETVIGA 242
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + E++ G+ D ++G + N+ G+D+ G+SG DT A +
Sbjct: 3 AIQGTNLGETLRGTRFADEILGKAGNDEIIGRGGDDLLRGNSGNDTLSGNAGNDTLDGGN 62
Query: 321 FENAIIVYDANE 332
++ +I N+
Sbjct: 63 GDDELIGSRGND 74
Score = 44.3 bits (103), Expect = 0.067, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+V G+S D ++G+ N F S GND +DG G DT Y + R V +
Sbjct: 290 NVTGTSNADDIVGDGNENEFGGSRGNDSYDGKGGNDTVDYSDLGQAVTLERGG----VVN 345
Query: 330 ANEHKQDFLSDVERLRFA 347
D + ++E + A
Sbjct: 346 KGSAGTDRIVNIETVIGA 363
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+V G+S D ++G+ N F S GND +DG G DT Y + R
Sbjct: 411 NVTGTSNADDIVGDGNENEFGGSRGNDSYDGKGGNDTVDYSDLGQAVTLERGG 463
>gi|167647627|ref|YP_001685290.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
gi|167350057|gb|ABZ72792.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
Length = 1052
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 10/138 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + + +VG G+D++IG + +GND+ G G D A
Sbjct: 897 DYHTSLAAVKVDGGLGDDHLVGGRGSDLLIGGDGADRISGGAGNDIIRGGGGHDRMQGGA 956
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ I + +++ D + D F S + I ++ L
Sbjct: 957 GDDTFVIGVGD-----LVTGDNQSDHIID-----FRGAGSASGGEQDLLIFTGFSAGSKL 1006
Query: 372 IQVIGQDVFESMKHFYEF 389
+ +++ + +
Sbjct: 1007 VLDHDMGNTPTLQLYQVY 1024
>gi|300868951|ref|ZP_07113555.1| hypothetical protein OSCI_3880008 [Oscillatoria sp. PCC 6506]
gi|300333018|emb|CBN58747.1| hypothetical protein OSCI_3880008 [Oscillatoria sp. PCC 6506]
Length = 1075
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 20/144 (13%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + IY + +I G+DL+ G + L +I G ++N
Sbjct: 889 NGNDTIYG-------NLGTDSILGGDGNDLI----FGNEDADLILGDIDNDTIYGGKEND 937
Query: 261 TIAQHTVIESVVGSS---------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
T+ + ++G++ G+D + G N+ SGND G G DT +
Sbjct: 938 TLCGGDGNDLLLGNNNDDLVDGCIGDDTIYGGKENDSLTGGSGNDFLSGDLGNDTLIGGS 997
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ 335
+ ++ + + + + D + +
Sbjct: 998 GNDVFLLVVGQGSDTILDFQQGQD 1021
Score = 53.2 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 50/154 (32%), Gaps = 14/154 (9%)
Query: 194 IYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
IYG G G+ I + TI+ GG D ++ GG N + L
Sbjct: 840 IYG---GKDGDAIIGGNGNDLLRGDSDNDTIF--GGSD--SDSIFGGKDNDLLLGENGND 892
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G +I + + G+ D+++G+ N+ + ND G G D
Sbjct: 893 TIYGNLGTDSILGGDGNDLIFGNEDADLILGDIDNDTIYGGKENDTLCGGDGNDLLLGNN 952
Query: 312 PSYLYKI-----YRFENAIIVYDANEHKQDFLSD 340
L + DFLS
Sbjct: 953 NDDLVDGCIGDDTIYGGKENDSLTGGSGNDFLSG 986
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 7/151 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ D + N + + + + +I G N TI +++ GSSG+D + GN+ N+
Sbjct: 771 NTPDNAVSATNSNDLLMGSTANDAIDGLGGNDTIYGMENDDNLSGSSGSDELFGNTGNDY 830
Query: 289 FFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ D G D S I+ ++ ++ ++ +
Sbjct: 831 IDGGTEQDTIYGGKDGDAIIGGNGNDLLRGDSDNDTIFGGSDSDSIFGGKDNDLLLGENG 890
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + DS+ + L + DLI
Sbjct: 891 NDTIYGNLGTDSILGGDGNDLIFGNEDADLI 921
Score = 40.9 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 42/125 (33%), Gaps = 2/125 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ S + + ++ + ++GS+ ND + G N+ + +D GSSG D
Sbjct: 762 PRTSSIVTPNTPDNAVSATNSNDLLMGSTANDAIDGLGGNDTIYGMENDDNLSGSSGSDE 821
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + I +Y + + L D D++ S +
Sbjct: 822 LFGNTGND--YIDGGTEQDTIYGGKDGDAIIGGNGNDLLRGDSDNDTIFGGSDSDSIFGG 879
Query: 367 SYEDL 371
DL
Sbjct: 880 KDNDL 884
>gi|255261264|ref|ZP_05340606.1| poly(beta-D-mannuronate) C5 epimerase 5 [Thalassiobium sp. R2A62]
gi|255103599|gb|EET46273.1| poly(beta-D-mannuronate) C5 epimerase 5 [Thalassiobium sp. R2A62]
Length = 392
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 51/156 (32%), Gaps = 11/156 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D +L+ + ++ + + GY N + + + G G+D + G
Sbjct: 136 NGNDTFNLSDEADLSRGLNGSDTMY----GYAGNDELYGDNDSDKLYGDEGDDKLYGGDG 191
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVE 342
N+ + G+D DG D + ++ + + D L +
Sbjct: 192 NDKLYGGKGDDKLDGGDNNDKLYGGNNDDDLDGGAGKDRLY----GNNGHDVLNGDKGFD 247
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
L K +L+ + ++ G+D
Sbjct: 248 FLNGGKGNDVLNGGKGNDLLQGGKGKDVMLGGTGED 283
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 9/177 (5%)
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDL 230
D S G + + ++YG + +Y E K +Y GDD
Sbjct: 147 ADLSRGLNGSDTMYGYAGNDELYGDNDS---DKLYGDEGDDKLYGGDGNDKLYGGKGDDK 203
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LD GG N + + G + + + + G G D + G N+V
Sbjct: 204 LD----GGDNNDKLYGGNNDDDLDGGAGKDRLYGNNGHDVLNGDKGFDFLNGGKGNDVLN 259
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
GND+ G G D + + + +DF ++ + +
Sbjct: 260 GGKGNDLLQGGKGKDVMLGGTGEDTFVFKNTSESKFKLSKADVIEDFQQGLDVIDLS 316
Score = 44.3 bits (103), Expect = 0.064, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 39/136 (28%), Gaps = 10/136 (7%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------NVFFESSGNDVFDGSSGLDT 306
N T + G +G+D + G + N + + G+D G G D
Sbjct: 135 LNGNDTFNLSDEADLSRGLNGSDTMYGYAGNDELYGDNDSDKLYGDEGDDKLYGGDGNDK 194
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + N+ D + +RL + K L
Sbjct: 195 LYGGKGDDKLDGGDNNDKLY-GGNNDDDLDGGAGKDRLYGNNGHDVLNGDKGFDFLNGGK 253
Query: 367 SYEDLIQVIGQDVFES 382
+ L G D+ +
Sbjct: 254 GNDVLNGGKGNDLLQG 269
>gi|212709812|ref|ZP_03317940.1| hypothetical protein PROVALCAL_00860 [Providencia alcalifaciens DSM
30120]
gi|212687623|gb|EEB47151.1| hypothetical protein PROVALCAL_00860 [Providencia alcalifaciens DSM
30120]
Length = 2918
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 3/140 (2%)
Query: 205 NIYKIEVQ-QKDSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
N++ +++Q SP I S DD + L T K+ ID + I + +
Sbjct: 2454 NVFNVDLQKNHISPVNPVISSSDRDDQILLPTGYISEKHVIDGQNGDDTIINKSLTSYVL 2513
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRF 321
+++ ++GN+V+ G + NN G+D+ G DT Y I
Sbjct: 2514 LGGEGDDNIKATAGNNVLYGGTGNNFISGGEGDDLLLSGEGNDTLMGEGGDDHYIIDGNH 2573
Query: 322 ENAIIVYDANEHKQDFLSDV 341
A + D + L +
Sbjct: 2574 SGAAYIEDNLGNNHIHLVNF 2593
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-NYIDLNTESWSSIGGYEKN-- 259
NN+ + + P + GG D L + L+ Y++L + E N
Sbjct: 2021 DNNLSGLMSRNNTMPTKY-LDGQGGKDTLIIDLLPDAHHAYVNLEKNTL--HYKQEGNHP 2077
Query: 260 -MTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYY 310
+++A IE+++ + ND + G+ +NV G D+ G G D
Sbjct: 2078 FISVAHLQNIENIIIRGNTNDSLRGDDKDNVLDGGLGKDLLVGYGGDDKLILTQGDAVGG 2137
Query: 311 APSYLYKIYRFE 322
+ Y I RFE
Sbjct: 2138 DGNDSYHIRRFE 2149
Score = 44.0 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 227 GDDLLDLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D + L+ ++ ID+ + + + I + + ++ + G +++ G
Sbjct: 2694 GNDGIVLSENDAREHWLIDMLAGNDEVMDMSQHGRVIKGGSGNDKLITTGGENILYGGQG 2753
Query: 286 NNVFFE-SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDV 341
+++ DV G D +Y + + ++D Q L D
Sbjct: 2754 DDILLAQGMRQDVLISLDGKDHLAGDKGDDIYIVSGHGQGDVTIHDLEGCNQVVLVDF 2811
>gi|126734902|ref|ZP_01750648.1| Hemolysin-type calcium-binding protein [Roseobacter sp. CCS2]
gi|126715457|gb|EBA12322.1| Hemolysin-type calcium-binding protein [Roseobacter sp. CCS2]
Length = 351
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G++ N TI ++ + GND V G +V +G+D+ +G G DT A
Sbjct: 52 ILGFDGNDTINGGAGLDFINAGLGNDTVNGGDGRDVIEGRAGDDILNGDDGNDTILGGAG 111
Query: 313 SYL 315
Sbjct: 112 DDD 114
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G I ++V G G DV+ G + +++ GND G +G D
Sbjct: 60 TINGGAGLDFINAGLGNDTVNGGDGRDVIEGRAGDDILNGDDGNDTILGGAGDDDINGGF 119
Query: 312 PSYLYKIYRFENAI 325
S + + R + I
Sbjct: 120 GSDIIRGGRGADEI 133
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I +++ G +G D + N+ G DV +G +G D
Sbjct: 43 LDGTDGDDLILGFDGNDTINGGAGLDFINAGLGNDTVNGGDGRDVIEGRAGDDILNGDDG 102
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ A D +
Sbjct: 103 ND----TILGGAGDDDINGGFGSDIIRG 126
>gi|209524104|ref|ZP_03272655.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209495479|gb|EDZ95783.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 474
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 29/177 (16%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
IY G D + G N + +S++ + + + + G G+D
Sbjct: 118 DIIYGGKGSDTI---YAGEGNNLL------FSNL----GDDLVYGGQGNDIIYGGQGDDT 164
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYY----------------APSYLYKIYRFEN 323
+ G NN GND+ G G D + + +Y ++
Sbjct: 165 IYGGEGNNTLLGDKGNDLIYGGQGNDIIYGGEGKNTISAGEGNNTLLGGAGDDLVYGGKD 224
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I+Y + + L F++ D V Q + + Y +D+I +
Sbjct: 225 DDIIYGGKGSDTIYAGEGNNLLFSNLGDDLVYGGQGNDIIYGGQGDDIIHGGEGNNT 281
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 14/183 (7%)
Query: 200 GSLGNNIYKIEVQQKD---SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G L + IY + IY G+D++ G KN I + +++ G
Sbjct: 50 GDLNDVIYGGDGGNNTLSGGAGDDLIYGGQGNDII---YGGEGKNTISAGEGN-NTLLGG 105
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + + G G+D + NN+ F + G+D+ G G D +
Sbjct: 106 AGDDLVYGGKDDDIIYGGKGSDTIYAGEGNNLLFSNLGDDLVYGGQGNDIIYGGQGDDTI 165
Query: 317 KIYRFENAIIVYDANE-----HKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYE 369
N ++ N+ D + E A + +++ L Y +
Sbjct: 166 YGGEGNNTLLGDKGNDLIYGGQGNDIIYGGEGKNTISAGEGNNTLLGGAGDDLVYGGKDD 225
Query: 370 DLI 372
D+I
Sbjct: 226 DII 228
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 15/180 (8%)
Query: 194 IYGAPKGSL-----GNN-IYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVK 240
IYG + GN+ IY + TI G++ L D + GG
Sbjct: 165 IYGGEGNNTLLGDKGNDLIYGGQGNDIIYGGEGKNTISAGEGNNTLLGGAGDDLVYGGKD 224
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ I + +I E N + + + V G GND++ G +++ GN+ G
Sbjct: 225 DDIIYGGKGSDTIYAGEGNNLLFSNLGDDLVYGGQGNDIIYGGQGDDIIHGGEGNNTLLG 284
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D + + IY E + + F + + + + ++V Q +
Sbjct: 285 DKGNDLIYGGTGND--TIYGVEGNNTILGGPGNNLIFGGKNDDVIHSGKGDNTVYGGQGN 342
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 49/148 (33%), Gaps = 13/148 (8%)
Query: 200 GSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI 253
+LG++ +Y + IY GDD++ + TL+G N + +I
Sbjct: 248 SNLGDDLVYGGQGND-------IIYGGQGDDIIHGGEGNNTLLGDKGNDLIYGGTGNDTI 300
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E N TI + G +DV+ +N + GND G S
Sbjct: 301 YGVEGNNTILGGPGNNLIFGGKNDDVIHSGKGDNTVYGGQGNDRISAGKGNSLLTGGKGS 360
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ + D ++D
Sbjct: 361 DTFSLVSGNPDKSFSIQELFGLDTITDF 388
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 5/151 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ +GG DL+ G + + I +++ G + I + + G G + +
Sbjct: 38 LIGTGGSDLI---TGGDLNDVIYGGDGGNNTLSGGAGDDLIYGGQGNDIIYGGEGKNTIS 94
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
NN +G+D+ G D + S IY E +++ +
Sbjct: 95 AGEGNNTLLGGAGDDLVYGGKDDDIIYGGKGSD--TIYAGEGNNLLFSNLGDDLVYGGQG 152
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + Q D++ + + DLI
Sbjct: 153 NDIIYGGQGDDTIYGGEGNNTLLGDKGNDLI 183
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 17/164 (10%)
Query: 208 KIEVQQKDSPFIQTIYDS-GGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
IY GG++ L D + GG N I I G E T
Sbjct: 42 GGSDLITGGDLNDVIYGGDGGNNTLSGGAGDDLIYGGQGNDI---------IYGGEGKNT 92
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ +++G +G+D+V G +++ + G+D G + F L +Y
Sbjct: 93 ISAGEGNNTLLGGAGDDLVYGGKDDDIIYGGKGSDTIYAGEGNNLLFSNLGDDL--VYGG 150
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ I+Y + + D+ D + Q + + Y
Sbjct: 151 QGNDIIYGGQGDDTIYGGEGNNTLLGDKGNDLIYGGQGNDIIYG 194
>gi|147673063|ref|YP_001217005.1| RTX protein [Vibrio cholerae O395]
gi|262169257|ref|ZP_06036949.1| RTX protein [Vibrio cholerae RC27]
gi|146314946|gb|ABQ19485.1| RTX protein [Vibrio cholerae O395]
gi|262022070|gb|EEY40779.1| RTX protein [Vibrio cholerae RC27]
Length = 2648
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 64/221 (28%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+++ +++ + GG K++ + G G+DV +N
Sbjct: 2271 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGKSN 2329
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 2330 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 2388
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ G D+
Sbjct: 2389 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVV 2448
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N D A + EGR+
Sbjct: 2449 -----KLMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 2484
Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 31/168 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--------LNTESWSSIGGYEK--- 258
+ I ++ GDD + + G ID + + +++ + +
Sbjct: 2355 NDTAVVAGRINHVFLGAGDDQ---SFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDY 2411
Query: 259 NMTIAQHTVIESVVGSSGNDV--VIGNSANNVFFESSGNDV---------FDGSSGLDTF 307
++TI + +E +GND + GN N +GNDV +G G D
Sbjct: 2412 SVTIGNNNQVEL---GAGNDFANIFGN--YNRINAGAGNDVVKLMGYHAVLNGGDGDDHL 2466
Query: 308 FYYAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
A S + E ++V ++ +DV+ + ID++
Sbjct: 2467 IATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNL 2514
Score = 37.8 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTI-AQHTVIES------VVGS 274
D+G D D ++ G N ++L + +++I G + A + V++ + G
Sbjct: 2403 VDTG--DDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGG 2460
Query: 275 SGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D +I + + + F G D+ +TF + + +V D
Sbjct: 2461 DGDDHLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRS 2520
Query: 333 HKQDFLSDVE 342
+ ++
Sbjct: 2521 EDNIVFNGID 2530
>gi|116075227|ref|ZP_01472487.1| Peptidase, metallopeptidase [Synechococcus sp. RS9916]
gi|116067424|gb|EAU73178.1| Peptidase, metallopeptidase [Synechococcus sp. RS9916]
Length = 236
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 13/162 (8%)
Query: 41 SFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCTPRYDSRY 98
SF + + +A+ + +++ L F E +D+ + + +
Sbjct: 82 SFRADPFYAHEKALAKKLIRATDRLIALDFREVRRQQDADLVIVGYCDQNDRLEGSARQN 141
Query: 99 FMEINFDKADVWRYGIGKG-TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ GI G T + LHE GH LGL HP S G +Y D + S
Sbjct: 142 LAGTQYIMILNGCLGIATGQTDAVYLFLHEFGHTLGLEHPFSNVDGDCLYD-DKPFSAAS 200
Query: 158 FLT--SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+VM+Y G DI +++I+G
Sbjct: 201 AHAGITVMAYKPRP-------GGPPRFFTDYDIEVLRRIWGP 235
>gi|84370137|ref|NP_001033645.1| matrix metalloproteinase-23 precursor [Bos taurus]
gi|117940110|sp|Q2TBM7|MMP23_BOVIN RecName: Full=Matrix metalloproteinase-23; Short=MMP-23; AltName:
Full=Matrix metallopeptidase 23B; Contains: RecName:
Full=Matrix metalloproteinase-23, soluble form; Flags:
Precursor
gi|83638695|gb|AAI09903.1| Matrix metallopeptidase 23B [Bos taurus]
Length = 393
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 32/142 (22%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDI 79
W ++ + YK + LS + + +A A WS V +F E + SD+
Sbjct: 90 RWEHFNLTYKILSFPRNLLSP-----SETRRGLA-AAFRMWSDVSPFSFREVAPEQPSDL 143
Query: 80 KFISSNNGYV-------------CTPRYDSRYFME---INFDKADVW-----RYGIGKG- 117
+ + T +F I+FD ++ W RY KG
Sbjct: 144 RIGFYPVNHTDCLVSPLHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGRTRYSWKKGV 203
Query: 118 --TILSHNALHEIGHALGLMHP 137
T L H A HEIGHALGLMH
Sbjct: 204 WLTDLVHVAAHEIGHALGLMHS 225
>gi|91976039|ref|YP_568698.1| heme peroxidase [Rhodopseudomonas palustris BisB5]
gi|91682495|gb|ABE38797.1| Animal haem peroxidase [Rhodopseudomonas palustris BisB5]
Length = 3094
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 24/192 (12%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW---SSIGGYE 257
S GN++Y + + S G D LDL+ ++L + S+ G
Sbjct: 2911 SDGNDVYYGDDSEGGS----------GIDTLDLSAAT-ANVTVNLGSGPLFHGSASGSQT 2959
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD----GSSGLDTFFYYAPS 313
N T+ IE+V SGND + ++A NV +GND F ++ DT + P
Sbjct: 2960 GNDTLWS---IENVYTGSGNDTITASNAVNVISGGTGNDTFRFTSTSAANGDTILDFEPG 3016
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + AN + L + A Q S ++ D
Sbjct: 3017 DRIDLTAIDAST---SANGDQSFELINGATFTAAGQLAVSFESREDGDFTVIRGNIDGNA 3073
Query: 374 VIGQDVFESMKH 385
+ + H
Sbjct: 3074 DADFKIEVAGHH 3085
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 39/115 (33%), Gaps = 3/115 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ I + V G D++ G++ + F GND+ + +G D F A
Sbjct: 2843 VTAGAGRDVIFAGAGNDQVFAGDGADMIYGDAGADRIFGHQGNDLINAGAGDDIVFGGAG 2902
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ L + + Y + S ++ L + + L + ++
Sbjct: 2903 NDLIVAELSDGNDVYYGDDSEGG---SGIDTLDLSAATANVTVNLGSGPLFHGSA 2954
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ V +G DV+ + N+ F G D+ G +G D F + + L ++
Sbjct: 2837 GDGNDFVTAGAGRDVIFAGAGNDQVFAGDGADMIYGDAGADRIFGHQGNDLINAGAGDDI 2896
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ N+ LSD + + D + + TA+
Sbjct: 2897 VFGGAGNDLIVAELSDGNDVYYGDDSEGGSGIDTLDLSAATAN 2939
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 12/109 (11%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D G +NYI + +GG + + TI + G+D + G++ ++
Sbjct: 953 DPGTAGPDENYIRFSGGEHIVVGGTDGDDTI---------ITDFGDDGIWGDAGDDRIES 1003
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G D+ +G +G D + + + +I AN + D L
Sbjct: 1004 GAGVDLVNGGAGNDIITDSGDTGDFLKGDEGDDVI---ANSNGIDILMG 1049
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 44/148 (29%), Gaps = 3/148 (2%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I DSG D D + I N+ + G + V
Sbjct: 1011 NGGAGNDIITDSG--DTGDFLKGDEGDDVI-ANSNGIDILMGGSGKDVVFVGVDDTEVFA 1067
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D V+G + + G+D + G DT + + ++ + EH
Sbjct: 1068 GEGDDFVLGGDGVDFLLGNEGDDWMEAGGGFDTTAGDNSELFFNSAIKGHDVMFAGSEEH 1127
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSI 361
D S + + + + + +
Sbjct: 1128 DFDAESGDDIMVQGESVMRNEGMFGFDW 1155
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 41/120 (34%), Gaps = 2/120 (1%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D +I + ++ + +G+D + +G+D A + + + D +
Sbjct: 976 GTDGDDTIITDFGDDGIWGDAGDDRIESGAGVDLVNGGAGNDIITDSGDTGDFLKGDEGD 1035
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
+ ++ L + + + ++ G D + + E G
Sbjct: 1036 DVIANSNGIDILMGGSGKDVVFVGVDDTEVFAGEGDDFVLGGDGVDFLLGNEGDDWMEAG 1095
Score = 44.7 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 12/142 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----LNTESWS-----SIGGYEK 258
DSPF T+ + G + L T G I +N S++
Sbjct: 1743 TANDTDSDSPFAITVVN--GANNLTATRPAGGPVTITDTGTINGGSFNYTVSDGFATDPA 1800
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
++ + + T ++ G++G D+++G+ A N+ + ND+ +G DT + A S
Sbjct: 1801 SVQVVRDTT-GAINGNNGVDILVGDGAANILEGAGSNDLIFAGAGDDTINWTATSIGGVD 1859
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
+ V F+ +
Sbjct: 1860 IANDGRDFVDGGAGTLDRFVVN 1881
>gi|229511357|ref|ZP_04400836.1| autotransporter adhesin [Vibrio cholerae B33]
gi|229518475|ref|ZP_04407919.1| autotransporter adhesin [Vibrio cholerae RC9]
gi|229607977|ref|YP_002878625.1| autotransporter adhesin [Vibrio cholerae MJ-1236]
gi|229345190|gb|EEO10164.1| autotransporter adhesin [Vibrio cholerae RC9]
gi|229351322|gb|EEO16263.1| autotransporter adhesin [Vibrio cholerae B33]
gi|229370632|gb|ACQ61055.1| autotransporter adhesin [Vibrio cholerae MJ-1236]
Length = 2630
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 64/221 (28%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+++ +++ + GG K++ + G G+DV +N
Sbjct: 2253 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGKSN 2311
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 2312 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 2370
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ G D+
Sbjct: 2371 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVV 2430
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N D A + EGR+
Sbjct: 2431 -----KLMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 2466
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 31/168 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--------LNTESWSSIGGYEK--- 258
+ I ++ GDD + + G ID + + +++ + +
Sbjct: 2337 NDTAVVAGRINHVFLGAGDDQ---SFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDY 2393
Query: 259 NMTIAQHTVIESVVGSSGNDV--VIGNSANNVFFESSGNDV---------FDGSSGLDTF 307
++TI + +E +GND + GN N +GNDV +G G D
Sbjct: 2394 SVTIGNNNQVEL---GAGNDFANIFGN--YNRINAGAGNDVVKLMGYHAVLNGGDGDDHL 2448
Query: 308 FYYAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
A S + E ++V ++ +DV+ + ID++
Sbjct: 2449 IATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNL 2496
Score = 37.8 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTI-AQHTVIES------VVGS 274
D+G D D ++ G N ++L + +++I G + A + V++ + G
Sbjct: 2385 VDTG--DDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGG 2442
Query: 275 SGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D +I + + + F G D+ +TF + + +V D
Sbjct: 2443 DGDDHLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRS 2502
Query: 333 HKQDFLSDVE 342
+ ++
Sbjct: 2503 EDNIVFNGID 2512
>gi|124006782|ref|ZP_01691613.1| S-layer-RTX protein [Microscilla marina ATCC 23134]
gi|123987690|gb|EAY27390.1| S-layer-RTX protein [Microscilla marina ATCC 23134]
Length = 176
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 3/95 (3%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I + ++ G+ GND + G N+ + GNDV G G D + A
Sbjct: 39 NAVIPGTSGNNTLYGTGGNDTMYGYGGNDTMYGGGGNDVLYGGKGNDRLYGDAGRDNIHG 98
Query: 319 YRFENAII---VYDANEHKQDFLSDVERLRFADQC 350
++ I D + + D S + +
Sbjct: 99 QDGDDNIYYRADVDGVDGRMDGGSGNDAIHIIGNV 133
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 30/89 (33%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N T+ +++ G GND + G N+V + GND G +G D
Sbjct: 42 IPGTSGNNTLYGTGGNDTMYGYGGNDTMYGGGGNDVLYGGKGNDRLYGDAGRDNIHGQDG 101
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ + D + +
Sbjct: 102 DDNIYYRADVDGVDGRMDGGSGNDAIHII 130
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 31/75 (41%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G N T+ + +++ G GNDV+ G N+ + +G D G G D +Y
Sbjct: 49 NTLYGTGGNDTMYGYGGNDTMYGGGGNDVLYGGKGNDRLYGDAGRDNIHGQDGDDNIYYR 108
Query: 311 APSYLYKIYRFENAI 325
A +
Sbjct: 109 ADVDGVDGRMDGGSG 123
Score = 50.5 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 41/141 (29%), Gaps = 35/141 (24%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+Y +GG+D + GY N T+ +
Sbjct: 39 NAVIPGTSGNNTLYGTGGNDTM----------------------YGYGGNDTMYGGGGND 76
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGND-------------VFDGSSGLDTFFYYAPSYLY 316
+ G GND + G++ + G+D DG SG D
Sbjct: 77 VLYGGKGNDRLYGDAGRDNIHGQDGDDNIYYRADVDGVDGRMDGGSGNDAIHIIGNVSPN 136
Query: 317 KIYRFENAIIVYDANEHKQDF 337
+ N +Y ++ +
Sbjct: 137 DVVIVNNWKQIYVKSQKVMTY 157
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 29/84 (34%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
N V+ G S NN + + GND G G DT + + + + + + ++
Sbjct: 39 NAVIPGTSGNNTLYGTGGNDTMYGYGGNDTMYGGGGNDVLYGGKGNDRLYGDAGRDNIHG 98
Query: 337 FLSDVERLRFADQCIDSVNVKQRS 360
D AD + S
Sbjct: 99 QDGDDNIYYRADVDGVDGRMDGGS 122
>gi|148556969|ref|YP_001264551.1| hemolysin-type calcium-binding protein [Sphingomonas wittichii RW1]
gi|148502159|gb|ABQ70413.1| Hemolysin-type calcium-binding region [Sphingomonas wittichii RW1]
Length = 385
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 4/178 (2%)
Query: 193 KIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+YG G G++I + D G D G +YI +
Sbjct: 148 HLYGQSPDGGPDGSDIIEGNDGSDYIQGNAGNDDLDGGLGSDRISGGADNDYIFGGEGND 207
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + N I + + G GND + G + NV G+D D +G DT
Sbjct: 208 -TVNGNKGNDIIDGWDGNDFLRGGQGNDNLRGGAGYNVVMGDLGDDTIDAQTGTDTLTGG 266
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTAS 367
+ L+ + F DF +R++F+ + V + Y A+
Sbjct: 267 EGADLFIMRSFATPPADRSELSVITDFTHGEDRIKFSGIMGAEIETVLSGTADSYEAA 324
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 39/164 (23%), Gaps = 12/164 (7%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+DL + IA +S+ G S +D ++V +G
Sbjct: 78 FTLTDAQLDLGDLFAADPAARASTARIALFAGDDSITGGSKDDYFNVQGGHDVVMGGAGF 137
Query: 296 DVFDGSSGLDTFFYYAPS---YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
D G G D + +P I + N D L
Sbjct: 138 DTISGGPGNDHLYGQSPDGGPDGSDIIEGNDGSDYIQGNAGNDD-------LDGGLGSDR 190
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESM--KHFYEFGLSEG 394
+ + + G D+ + F G
Sbjct: 191 ISGGADNDYIFGGEGNDTVNGNKGNDIIDGWDGNDFLRGGQGND 234
>gi|237801266|ref|ZP_04589727.1| hemolysin-type calcium-binding region:hemolysin-type calcium
binding related protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024125|gb|EGI04182.1| hemolysin-type calcium-binding region:hemolysin-type calcium
binding related protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 634
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 4/138 (2%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + K + S T+Y G D+LD G N E + G N +
Sbjct: 124 GVDTLKTMTRGVASDAADTLYGDVGADVLD----GLNGNDKLYGEEGDDLLSGGGGNDWL 179
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G +G+D + G+ +++ +GND G +G DT+ +Y I ++
Sbjct: 180 YGGAGNDTLNGGAGDDSLSGDVGDDILDGGAGNDYLSGYTGNDTYLFYRGMGQDTITEYD 239
Query: 323 NAIIVYDANEHKQDFLSD 340
+ D + D D
Sbjct: 240 TTVGNVDIIKVAADIAPD 257
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 7/129 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + +++ G +G D + G + + +GND G +G DT+ +Y
Sbjct: 494 LNGLGGDDKLYGLSGNDTLNGGAGKDTLYGGAGADTLDGGAGNDSLYGDAGNDTYLFYRG 553
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + I YD+ D + E L AD + + +
Sbjct: 554 AGQ-------DWISDYDSTAGNLDVIKIAENLTPADIQLSRSTYDLYVGIAGATDKLTVS 606
Query: 373 QVIGQDVFE 381
+
Sbjct: 607 GWFSNSSTQ 615
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GNDV++G + +++ G D DG +G D+ + + Y R +++
Sbjct: 338 DQIYGLAGNDVLLGGAGDDMLDGGMGRDTLDGGAGNDSLYGGTDNDTYLFQRGGGQDVIF 397
Query: 329 DANEHKQDFLSDVERLRFADQCIDS 353
D++ +++ ++ A +
Sbjct: 398 DSDW----TAGNIDTIKLASGIAST 418
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T + G SG+D + G S N++ +GND G G DT+ +Y + F+
Sbjct: 1 MGDTTATLINGQSGDDWLYGTSGNDILDGGAGNDSLSGQFGNDTYLFYRGMGQDTVTDFD 60
Query: 323 NAIIVYDANEHKQDF 337
+ D + D
Sbjct: 61 WTVGNIDTIKVAADI 75
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 60/209 (28%), Gaps = 50/209 (23%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--------IGGVKNYIDLNTES- 249
G GN+ Y + G D + + + NY+ L+ +
Sbjct: 37 SGQFGNDTYLFYRGMGQDTVTDFDWTVGNIDTIKVAADIAPADVMVSRDGNYLYLSIKGT 96
Query: 250 --------WSSIGGYEKNMTIAQHTV--------IESVVGSSGNDVVIGNSANNVFFESS 293
+++I + + A TV + V S D + G+ +V +
Sbjct: 97 TDKMSVTLFNNINYQVERVEFADGTVWGVDTLKTMTRGVASDAADTLYGDVGADVLDGLN 156
Query: 294 GND------------------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND G +G DT A ++ +
Sbjct: 157 GNDKLYGEEGDDLLSGGGGNDWLYGGAGNDTLNGGAGDDSLSGDVGDDILD----GGAGN 212
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEY 364
D+LS D + + Q +I EY
Sbjct: 213 DYLSG---YTGNDTYLFYRGMGQDTITEY 238
>gi|158333401|ref|YP_001514573.1| type I secretion target repeat-containing protein [Acaryochloris
marina MBIC11017]
gi|158303642|gb|ABW25259.1| type I secretion target repeat protein, putative [Acaryochloris
marina MBIC11017]
Length = 682
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 59/186 (31%), Gaps = 12/186 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--GYEKNMTI 262
+ +EV T+ D G L + G + + ++ + + G + T
Sbjct: 365 TVETLEVNSDGGDDQFTVGDLSGTGLEKVVFNAGYGSDVLEGADATTDVQALGGTGDDTF 424
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI---- 318
+ +++ G GND + G + ++ G+D G +G D + +
Sbjct: 425 TSGSGNDTLEGEGGNDSLAGGNGDDQLLGGEGDDTLRGGNGNDLTDGGSGNDTADFSDIP 484
Query: 319 ----YRFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
YD D L +E L + + +IL+ + L
Sbjct: 485 FEIRADLNTGKAQYDVAPGVTVEDTLVSIENLTGSTFNDRLAGDRNANILDGGDGNDRLT 544
Query: 373 QVIGQD 378
G D
Sbjct: 545 GRRGAD 550
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 3/121 (2%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKN 259
+ G Y + + +I + G + L G I L+ + + G
Sbjct: 492 NTGKAQYDVAPGVTVEDTLVSIENLTGS-TFNDRLAGDRNANI-LDGGDGNDRLTGRRGA 549
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ ++++G G D ++G + +V G D +G +G D + +++
Sbjct: 550 DTLLGGNGDDNLIGGRGADRLVGGADKDVLLGGRGADDLNGGTGNDLMRGGRGADVFRFE 609
Query: 320 R 320
R
Sbjct: 610 R 610
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 15/146 (10%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG P+ + + + +P + I GG+D + + N I
Sbjct: 217 LYGEPQAAETLDGDDGDNVLTGTPGGEFIRGFGGNDAI----LAFGGNDI---------A 263
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYA 311
G + N I+ + + G +G+D VIG+ ++ GND + G D A
Sbjct: 264 QGGDGNDVISGGDGSDFLDGGAGDDTVIGDKGDDTKLGGDGNDRIIWNDGDGSDRIDGGA 323
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF 337
++ + ++ D
Sbjct: 324 DMDTVEVNGSPDLGDEFEVAAGASDV 349
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 52/147 (35%), Gaps = 14/147 (9%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDL--LDLTLIGGVKNYIDLNTESWSS--------- 252
N+YK+++ ++P + G D+ +D L G + L+ + +
Sbjct: 184 GNLYKVKITSGNTPIGANDDPANGVDVVVIDDLLYGEPQAAETLDGDDGDNVLTGTPGGE 243
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G+ N I + G GNDV+ G ++ +G+D G G DT
Sbjct: 244 FIRGFGGNDAILAFGGNDIAQGGDGNDVISGGDGSDFLDGGAGDDTVIGDKGDDTKLGGD 303
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL 338
+ +I + D +
Sbjct: 304 GND--RIIWNDGDGSDRIDGGADMDTV 328
>gi|159044171|ref|YP_001532965.1| putative hemolysin [Dinoroseobacter shibae DFL 12]
gi|157911931|gb|ABV93364.1| putative hemolysin precursor [Dinoroseobacter shibae DFL 12]
Length = 504
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 6/124 (4%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
TI ++V+G G D + G + ++V SG+D DG +G D +
Sbjct: 334 GATIMAQQGEDTVIGGVGRDSLSGGAGDDVLAGGSGDDSLDGGAGADVLAGGTGDD---L 390
Query: 319 YRFENAIIVYDANEHKQDFLSDV--ERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVI 375
+ V L + + F D + I + + ++ L +
Sbjct: 391 LMGGDGNDVLIDGLGSDTLLGGIGHDVFLFCDPRLIGGQSGTDFDTFDGGEGHDILYLAL 450
Query: 376 GQDV 379
G
Sbjct: 451 GDAQ 454
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + +A + +S+ G +G DV+ G + +++ GNDV G DT
Sbjct: 354 SLSGGAGDDVLAGGSGDDSLDGGAGADVLAGGTGDDLLMGGDGNDVLIDGLGSDTLLGGI 413
Query: 312 PSYLYKIYR----FENAIIVYDANEHKQDFLSDVERLRFADQCI 351
++ + +D + + D+ L D
Sbjct: 414 GHDVFLFCDPRLIGGQSGTDFDTFDGGEG--HDILYLALGDAQR 455
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 3/158 (1%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + L ++I + T+ +S+ G +G+DV+ G S ++ +G D
Sbjct: 321 GSAAGDMVLVRGDGATIMAQQGEDTVIGGVGRDSLSGGAGDDVLAGGSGDDSLDGGAGAD 380
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL-RFADQCIDSVN 355
V G +G D + + + + + H D + + D+ +
Sbjct: 381 VLAGGTGDDLLMGGDGNDV--LIDGLGSDTLLGGIGHDVFLFCDPRLIGGQSGTDFDTFD 438
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ + Y A + QV + + G+ E
Sbjct: 439 GGEGHDILYLALGDAQRQVFETTGSLAEIGIFATGIEE 476
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 24/129 (18%)
Query: 221 TIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI G+D + +L GG + + S+ G +A T + ++G
Sbjct: 336 TIMAQQGEDTVIGGVGRDSLSGGAGDDVLAGGSGDDSLDGGAGADVLAGGTGDDLLMGGD 395
Query: 276 GNDVVIGNSANNVFFESSGN-------------------DVFDGSSGLDTFFYYAPSYLY 316
GNDV+I ++ G+ D FDG G D +
Sbjct: 396 GNDVLIDGLGSDTLLGGIGHDVFLFCDPRLIGGQSGTDFDTFDGGEGHDILYLALGDAQR 455
Query: 317 KIYRFENAI 325
+++ ++
Sbjct: 456 QVFETTGSL 464
>gi|229504974|ref|ZP_04394484.1| RTX protein [Vibrio cholerae BX 330286]
gi|229357197|gb|EEO22114.1| RTX protein [Vibrio cholerae BX 330286]
Length = 2630
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 64/221 (28%), Gaps = 20/221 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I+++ +++ + GG K++ + G G+DV +N
Sbjct: 2253 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGD-NNNFWGGRGDDVFYATGKSN 2311
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+F GND + G G DT A + + + D
Sbjct: 2312 IFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTG 2370
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + + + + + + G D ++ G D+
Sbjct: 2371 SGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVV 2430
Query: 399 FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRN 436
L Y + N D A + EGR+
Sbjct: 2431 -----KLMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 2466
Score = 44.3 bits (103), Expect = 0.063, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 31/168 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--------LNTESWSSIGGYEK--- 258
+ I ++ GDD + + G ID + + +++ + +
Sbjct: 2337 NDTAVVAGRINHVFLGAGDDQ---SFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDY 2393
Query: 259 NMTIAQHTVIESVVGSSGNDV--VIGNSANNVFFESSGNDV---------FDGSSGLDTF 307
++TI + +E +GND + GN N +GNDV +G G D
Sbjct: 2394 SVTIGNNNQVEL---GAGNDFANIFGN--YNRINAGAGNDVVKLMGYHAVLNGGDGDDHL 2448
Query: 308 FYYAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
A S + E ++V ++ +DV+ + ID++
Sbjct: 2449 IATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNL 2496
Score = 37.8 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTES-WSSIGGYEKNMTI-AQHTVIES------VVGS 274
D+G D D ++ G N ++L + +++I G + A + V++ + G
Sbjct: 2385 VDTG--DDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGG 2442
Query: 275 SGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D +I + + + F G D+ +TF + + +V D
Sbjct: 2443 DGDDHLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRS 2502
Query: 333 HKQDFLSDVE 342
+ ++
Sbjct: 2503 EDNIVFNGID 2512
>gi|34395497|sp|Q44494|ALGE1_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 1; AltName:
Full=Mannuronan epimerase 1
gi|790692|gb|AAA87311.1| mannuronan C-5-epimerase [Azotobacter vinelandii]
Length = 1403
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L+ + G + N + + + G +G+D + G + +++ +G D G +G
Sbjct: 1217 LSGGTVEVPQGTDGNDVLVGSDANDQLYGGAGDDRLDGGAGDDLLDGGAGRDDLTGGTGA 1276
Query: 305 DTFFYYAPSYLYKI--YRFENAIIVYDANEHKQDFLSDVERLRFADQ--CIDSVNVKQRS 360
DTF + A + Y+ F + I+ +DA+E + D LS + F D V +
Sbjct: 1277 DTFVFAARTDSYRTDAGVFNDLILDFDASEDRID-LSALGFSGFGDGYNGTLLVQLSSAG 1335
Query: 361 ILEYTASYE 369
Y SYE
Sbjct: 1336 TRTYLKSYE 1344
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 74/211 (35%), Gaps = 16/211 (7%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG + + G + + D + G + + G + +
Sbjct: 338 YGIQERADGTDYSSLYANSIDGVQTGAVRLYGANSTVSSQSGSGQQAT----------LE 387
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N ++ E+++G +G+D + G++ N++ +G D G +G DTF + A +
Sbjct: 388 GSAGNDALSGTEAHETLLGQAGDDRLNGDAGNDILDGGAGRDNLTGGAGADTFRFSARTD 447
Query: 315 LYKIY--RFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y+ F + I +DA+E D + L + Y SYE
Sbjct: 448 SYRTDSASFNDLITDFDADEDSIDLSALGFTGLGDGYNGTLLLKTNAEGTRTYLKSYE-- 505
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
FE GL ++ FD+
Sbjct: 506 -ADAQGRRFEIALDGNFTGLFNDNNLLFDAA 535
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + N T+ E ++G G D + G + +++ +G D G +G DTF +
Sbjct: 696 IEGTDGNDTLQGTEANERLLGLDGRDNLNGGAGDDILDGGAGRDTLTGGTGADTFLFSTR 755
Query: 313 SYLYKIY--RFENAIIVYDANEHKQDF 337
+ Y+ F + I +D + + D
Sbjct: 756 TDSYRTDSASFNDLITDFDPTQDRIDL 782
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 37/74 (50%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G+ + ++G N+ +G+D+ G +G D+ A + +++ ++ Y
Sbjct: 544 DNLLGTDAGETLLGYGGNDTLNGGAGDDILVGGAGRDSLTGGAGADVFRFDALSDSQRNY 603
Query: 329 DANEHKQDFLSDVE 342
+++ D + D +
Sbjct: 604 TTGDNQADRILDFD 617
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + + E+++G GND + G + +++ +G D G +G D F + A S
Sbjct: 539 GTEGSDNLLGTDAGETLLGYGGNDTLNGGAGDDILVGGAGRDSLTGGAGADVFRFDALSD 598
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ Y + + DV L F
Sbjct: 599 SQRNYTTGDNQADRILDFDPTLDRIDVSALGFTG 632
>gi|288960450|ref|YP_003450790.1| haemolysin-type calcium-binding region-containing protein
[Azospirillum sp. B510]
gi|288912758|dbj|BAI74246.1| haemolysin-type calcium-binding region-containing protein
[Azospirillum sp. B510]
Length = 272
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 1/156 (0%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
YD D ++GG N + L ++ G + + ++ + + G +G DV++G
Sbjct: 9 YDVHVGTNHDDLIVGGQGNDLSLGGNGNDTLLGGDGHDVLSGGNGADVIHGGTGADVLLG 68
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S +++ SG+D+ G +G D A + ++ + D N+ D +
Sbjct: 69 GSGSDIIDGGSGDDIILGGNGDDVLIGGAGRDVLDGGNGDDVLSGGDGNDVLTGGKGD-D 127
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
L K IL + L G D
Sbjct: 128 TLMGGGHDDILDGGKGDDILHGGTGNDILKGGDGDD 163
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 32/85 (37%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + T + + G G+D + G+ ++ G+D+ G +G D F +
Sbjct: 138 LDGGKGDDILHGGTGNDILKGGDGDDTLFGDDGDDRLEGGKGDDILSGGAGHDVFIFSGG 197
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF 337
+ F+ + +
Sbjct: 198 GGQDMVLDFKAGEDILQIARNINGL 222
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 10/138 (7%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+ G + I + +G +GND ++G ++V +G DV G +G D
Sbjct: 7 GSYDVHVGTNHDDLIVGGQGNDLSLGGNGNDTLLGGDGHDVLSGGNGADVIHGGTGADVL 66
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ S + ++ I+ + D L +L
Sbjct: 67 LGGSGSDIIDGGSGDDIIL----GGNGDDVLIG------GAGRDVLDGGNGDDVLSGGDG 116
Query: 368 YEDLIQVIGQDVFESMKH 385
+ L G D H
Sbjct: 117 NDVLTGGKGDDTLMGGGH 134
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 55/166 (33%), Gaps = 10/166 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D G D + ++GG + + + + G + ++ + + G G+D ++
Sbjct: 74 IIDGGSGDDI---ILGGNGDDVLIGGAGRDVLDGGNGDDVLSGGDGNDVLTGGKGDDTLM 130
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G +++ G+D+ G +G D F + D LS
Sbjct: 131 GGGHDDILDGGKGDDILHGGTGNDILKGGDGDDTL----FGDDGDDRLEGGKGDDILSGG 186
Query: 342 ---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ F+ + + ++ + ++ + D +
Sbjct: 187 AGHDVFIFSGGGGQDMVLDFKAGEDILQIARNINGLKVSDAADLAA 232
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 6/171 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D G D + L GG N + + ++ G + + + + G +GND++
Sbjct: 101 VLDGGNGDDV---LSGGDGNDVLTGGKGDDTLMGGGHDDILDGGKGDDILHGGTGNDILK 157
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLS 339
G ++ F G+D +G G D A ++ +V D A E
Sbjct: 158 GGDGDDTLFGDDGDDRLEGGKGDDILSGGAGHDVFIFSGGGGQDMVLDFKAGEDILQIAR 217
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQDVFESMKHFYEF 389
++ L+ +D + V + + D I + G + H +F
Sbjct: 218 NINGLKVSDAADLAARVTDQHGDAVIDLGHGDSITLKGVSAADIHNHPNDF 268
>gi|126728313|ref|ZP_01744129.1| hypothetical protein SSE37_20022 [Sagittula stellata E-37]
gi|126711278|gb|EBA10328.1| hypothetical protein SSE37_20022 [Sagittula stellata E-37]
Length = 364
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
G+D + D T+ G N + L E + G + N T+ + + + G +G D +
Sbjct: 212 GNDTIEGGLDDDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDLIEGGAGADWLK 271
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
G N+ F +G+D+ G G D F + S + F++ I
Sbjct: 272 GEGGNDTLFGGAGDDLLVGGDGADVFVFAQESGFDIVADFQDGI 315
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 28/189 (14%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYE 257
GN+ Y TI GDD+L D L GG+ + L G E
Sbjct: 23 GNDTY------HGLEGNDTIDGEAGDDVLWGGLDDDWLKGGIGYDLLL---------GGE 67
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N TI +++ G +GND+++G ++ GND DG SG DT K
Sbjct: 68 GNDTIEGGLDNDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDTVEGGLGDDWMK 127
Query: 318 --------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ N I ++ D + + + + ++ + +
Sbjct: 128 GEQGRDLMLGGEGNDTIEGGLDDDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGND 187
Query: 370 DLIQVIGQD 378
+ +G D
Sbjct: 188 TVEGGLGDD 196
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 1/130 (0%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N TI +++ G +GND+++G ++ GND DG SG DT
Sbjct: 137 GGEGNDTIEGGLDDDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDTVEGGLGDD 196
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
K + + ++ + N+ + L D + + + + ++ + +
Sbjct: 197 WMKGEQGRDLMLGGEGNDTIEGGLDD-DTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGE 255
Query: 375 IGQDVFESMK 384
G D+ E
Sbjct: 256 SGNDLIEGGA 265
Score = 44.7 bits (104), Expect = 0.055, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 10/127 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + IA ++ G GND + G + ++V + +D G G D
Sbjct: 8 NLFGTDMADFIALLEGNDTYHGLEGNDTIDGEAGDDVLWGGLDDDWLKGGIGYDLLLGG- 66
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N I + D + + + + ++ + + +
Sbjct: 67 ---------EGNDTIEGGLDNDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDTV 117
Query: 372 IQVIGQD 378
+G D
Sbjct: 118 EGGLGDD 124
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 57/180 (31%), Gaps = 30/180 (16%)
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV---------- 271
G+D + D T+ G N + L E + G + N T+ + ++V
Sbjct: 140 GNDTIEGGLDDDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDTVEGGLGDDWMK 199
Query: 272 --------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-- 321
+G GND + G ++ +GND+ G G D +
Sbjct: 200 GEQGRDLMLGGEGNDTIEGGLDDDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGND 259
Query: 322 ---ENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
A + E D L + L D Q S + A ++D I +
Sbjct: 260 LIEGGAGADWLKGEGGNDTLFGGAGDDLLVGGDGADVFVFAQESGFDIVADFQDGIDKVN 319
>gi|17231730|ref|NP_488278.1| hypothetical protein alr4238 [Nostoc sp. PCC 7120]
gi|17133373|dbj|BAB75937.1| alr4238 [Nostoc sp. PCC 7120]
Length = 1821
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 68/222 (30%), Gaps = 52/222 (23%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKN-YIDLNTESWSSIGGYEKNMTI 262
DSP TI GDD + D ++ G N I + ES +S
Sbjct: 1587 GDGADTVDSPGNNTISTGNGDDTVFVGSDASVSTGNGNDQIFIGVESPASNTTANGGNGD 1646
Query: 263 AQHTVIES------------------------VVGSSGNDVVIGNSANNVFFESSG---- 294
+ TVIE+ G SGND + N + N SG
Sbjct: 1647 DEITVIEAGGSNNLFGAAGNDTLQVIEGSRQFAFGGSGNDTLTSNGSYNRLNGGSGDDKL 1706
Query: 295 ----NDVFDGSSGLDTFFYY--------APSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
ND G G D F + + + + + + DF V+
Sbjct: 1707 FSSVNDSLFGGDGDDVLFAGQAGSNRLTGGAGADQFWIANGS--LPTSKNTVTDFAVGVD 1764
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ + + V Q S L D + +G +++
Sbjct: 1765 KI-----GLGGIGVTQFSALSLVQQGADTLVKLGATELVALQ 1801
>gi|86144669|ref|ZP_01063001.1| putative lipoprotein [Vibrio sp. MED222]
gi|85837568|gb|EAQ55680.1| putative lipoprotein [Vibrio sp. MED222]
Length = 522
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VGS D ++GN +N F +S N+ FDGS G D Y I + +
Sbjct: 438 IVGSEALD-ILGNPQDNYFEGNSANNTFDGSDGTDVLKINGNKNDYSIEKLAGGVTKISG 496
Query: 331 NEHKQDFLSDVERLRFADQCI 351
D +S+VE ++F D+ +
Sbjct: 497 KSIGTDKISNVEYIKFNDEVV 517
>gi|197106116|ref|YP_002131493.1| hypothetical protein PHZ_c2655 [Phenylobacterium zucineum HLK1]
gi|196479536|gb|ACG79064.1| hypothetical protein PHZ_c2655 [Phenylobacterium zucineum HLK1]
Length = 449
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 49/147 (33%), Gaps = 10/147 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+D+ I G D +D + G ++ + G N T+ + VVG
Sbjct: 263 QDNRGSNFIRGGDGHDRIDASNFGSD----------FNDLHGNWGNDTVLGGRGGDWVVG 312
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + G + + G+D DG +G D + + ++ + N+
Sbjct: 313 GQGNDELKGGDGADAVLGNLGHDDLDGGAGNDVVRGGQGDDVVRGGDGDDYLAGDRGNDT 372
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRS 360
FA ID + +
Sbjct: 373 LYGGAGADLFHTFAGAGIDRIRDFNAA 399
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 2/131 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N + + V G G+D +IG ++ G+D+ G G D F
Sbjct: 198 SVSGGAGNEELVGSVGPDQVAGGGGSDTLIGYEGHDTLTGEGGSDIVTGGGGDDQLFGGD 257
Query: 312 PSYLYKIYRFENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ R N I D +F SD L + + + +
Sbjct: 258 GDDFLQDNRGSNFIRGGDGHDRIDASNFGSDFNDLHGNWGNDTVLGGRGGDWVVGGQGND 317
Query: 370 DLIQVIGQDVF 380
+L G D
Sbjct: 318 ELKGGDGADAV 328
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 21/59 (35%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++VG GND + G + G+D D SG T + R +
Sbjct: 6 GGVGADTLVGGDGNDTLFGMGGADRLVGGGGDDRLDAGSGQATLLGGDGRDTIQGQRGD 64
Score = 44.0 bits (102), Expect = 0.095, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 17/62 (27%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G + GND G G D + ++ D + Q
Sbjct: 3 VLNGGVGADTLVGGDGNDTLFGMGGADRLVGGGGDDRLDAGSGQATLLGGDGRDTIQGQR 62
Query: 339 SD 340
D
Sbjct: 63 GD 64
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Query: 245 LNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
LN + + G + N T+ + +VG G+D + S G D G G
Sbjct: 4 LNGGVGADTLVGGDGNDTLFGMGGADRLVGGGGDDRLDAGSGQATLLGGDGRDTIQGQRG 63
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + ++ + A + D E
Sbjct: 64 DYIIDAGPGNDIVELGLWPAAAVTLGPGADTLSLNIDPE 102
>gi|13937109|gb|AAK50053.1|AF363363_1 RTX-toxin IIIA [Actinobacillus pleuropneumoniae]
Length = 1052
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 39/110 (35%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G+ G+D++ GN +++ + GND G +G D + + N +
Sbjct: 750 DIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLLGGNGNNYLSGG 809
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D N+ Q + LR +L+ + L G D
Sbjct: 810 DGNDELQVLGNGFNVLRAGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSD 859
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 7/148 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + + + + + G GND + G++ N+ + GND G +G +
Sbjct: 752 FHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLLGGNGNNYLSGGDG 811
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ ++ + K S + L + Y ++ +
Sbjct: 812 NDELQVLGNGFNVLRAGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHT 871
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ K + D +FD
Sbjct: 872 IYDQGKSSDLDKLYLS-------DFSFD 892
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 7/122 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS D+ G +++ + G+D+ G G D + + ++
Sbjct: 741 DEFKGSKFRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLLGG 800
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ N + + E L+ + + + Y +S DL+ + + E
Sbjct: 801 NGNNYLSGGDGNDE-LQVLGNGFNVLRAGKGDDKLYGSSGSDLLDGGEGN------DYLE 853
Query: 389 FG 390
G
Sbjct: 854 GG 855
>gi|328473926|gb|EGF44743.1| putative RTX toxin [Vibrio parahaemolyticus 10329]
Length = 1540
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND++ G N+ F + ND+ G G D ++K I V
Sbjct: 1388 DTIYGGAGNDILFGQGGNDKLFGGADNDILIGGLGSDILTGGDGEDIFK------WIDVT 1441
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + DF S + L F+D D + +L S
Sbjct: 1442 NERDTVTDFSSSEDSLDFSDLFDDLSKDEVGDLLSDLQS 1480
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
YI N + Y++ TI + + G GND + G + N++ G+D+ G
Sbjct: 1370 YITENQAEFEQSRYYDQADTIYGGAGNDILFGQGGNDKLFGGADNDILIGGLGSDILTGG 1429
Query: 302 SGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G D F + + + F ++ D ++ D D
Sbjct: 1430 DGEDIFKWIDVTNERDTVTDFSSSEDSLDFSDLFDDLSKD 1469
>gi|316965930|gb|EFV50566.1| matrix metalloproteinase-20 [Trichinella spiralis]
Length = 293
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 29/139 (20%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+++ F + + F G V Y + ++FD A+ W + G L A+
Sbjct: 170 INIFFAHGDHNDSLPF-DGMAGVVAHGFYPTNG--NLHFDAAEHWTLHMDNGINLFQTAV 226
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HEIGH LGL H YN VM P + D F
Sbjct: 227 HEIGHLLGLEHSTDYNA-------------------VM---FPINRPYDPMFR----LGD 260
Query: 186 SDIVAVQKIYGAPKGSLGN 204
DI ++ +Y + N
Sbjct: 261 DDIRGIRYLYAPWAWTACN 279
>gi|262092790|gb|ACY25769.1| alkaline metalloprotease [uncultured bacterium]
Length = 65
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + +++D GG+D LD + I+LN S+S +GG E N++IA
Sbjct: 12 LSATANADKLVFSVWDGGGNDTLDFSGFT-QNQKINLNETSFSDVGGLEGNVSIA 65
>gi|212634232|ref|YP_002310757.1| hemolysin-type calcium-binding region [Shewanella piezotolerans WP3]
gi|212555716|gb|ACJ28170.1| Hemolysin-type calcium-binding region [Shewanella piezotolerans WP3]
Length = 1588
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 50/179 (27%), Gaps = 16/179 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTV 267
++ G+D L DL + + N +
Sbjct: 1408 SDNLNAGNGNNQLFGGDGNDKLTSGSGS------DLLEGGAGNDALSSGSGNDQLFGGEG 1461
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIY 319
+++ G SG+D++ G + N+ GND G G D +
Sbjct: 1462 NDNLSGGSGDDMLYGEAGNDKLTGGGGNDQLFGGDGDDKLVGSGGNDQLHGDVGNDQLSG 1521
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N ++ + K D S + L D IL + + L G D
Sbjct: 1522 GSGNDMLFAGVGDDKLDGGSGSDELYGGDGADTLAGGSGDDILFGDSGADTLDGGTGVD 1580
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 63/196 (32%), Gaps = 13/196 (6%)
Query: 196 GAPKGSLG---NNIYKI--EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYID 244
G + G + IY IY G+D L D G + I
Sbjct: 948 GDNTINTGEGKDEIYGGVGADTVYAGTGDDVIYGGDGNDALHGEEGDDFIDGGTGSDTIS 1007
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ I G + + TIA + + G G+D + G ++ F +G+D G +G
Sbjct: 1008 GGVGAD-LIFGGDGSDTIAGDEGNDLLFGGEGHDQIAGGEGDDQLFGEAGDDSLSGGAGA 1066
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D F A ++ + D +++ L + + + +L
Sbjct: 1067 DLLFGGAGDDTLDGGDADDQLFAGDGDDNVIGGL-GSDFVDGGSGHDTIAGGEGDDVLLG 1125
Query: 365 TASYEDLIQVIGQDVF 380
+ + G+D
Sbjct: 1126 GDGNDTIEGGAGKDKL 1141
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 8/157 (5%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D + G + ID + +I + N T+ +++ G GND++ G
Sbjct: 675 GGDGHDSIIAGAGDDIIDAGLGND-TIDAGDGNDTVYAQDGNDTIEGGLGNDLLHGGQGI 733
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVER 343
+ G+D G G DT A + L ++ I D L S ++
Sbjct: 734 DHLDGGEGDDTLYGGGGADTLIGGAGNDLVDGGEGDDVIT----GGEGDDTLIGGSGADQ 789
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L V L A + + G D
Sbjct: 790 LSGGLGDDVLVGDAGDDTLLGEAGNDTIYAGAGSDSL 826
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 60/190 (31%), Gaps = 16/190 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G+ G+ TI GDD++ D T+I G N
Sbjct: 534 GSNTIDAGDG----NDLVYAGVDADTIDAGSGDDVIFSDAGDDTVIAGAGNDQIYAGAGD 589
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--- 307
I G E + TI + V+G GND + G + + GND G G D
Sbjct: 590 DVITGGEGDDTIYAEDGDDLVIGGVGNDTLYGGAGADRLEGGEGNDALSGGEGNDELLSG 649
Query: 308 ----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
F S I + ++ + H + + A D+++ +
Sbjct: 650 SGDNFLDGGSGDDIITAQDGDDVLIGGDGHDSIIAGAGDDIIDAGLGNDTIDAGDGNDTV 709
Query: 364 YTASYEDLIQ 373
Y D I+
Sbjct: 710 YAQDGNDTIE 719
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 61/182 (33%), Gaps = 10/182 (5%)
Query: 199 KGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVKNYIDLNTESWSS 252
G G+++ Y TIY D ++ + ++ D+ +
Sbjct: 431 TGGAGDDVLFGYAGANVLDGGSGNDTIYGGSDSDQINAGEGDDLVYAESGDDVIEGGVGN 490
Query: 253 --IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + N TI T +S+ G+D +IG S ++ + +G++ D G D +
Sbjct: 491 DALFGGDGNNTIDGGTGHDSIYAGDGDDTLIGGSGDDKIYSGAGSNTIDAGDGNDLVY-- 548
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A I +++ +A D + + Y +D
Sbjct: 549 AGVDADTIDAGSGDDVIFSDAGDDTVIAGAGNDQIYAGAGDDVITGGEGDDTIYAEDGDD 608
Query: 371 LI 372
L+
Sbjct: 609 LV 610
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 1/149 (0%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + T++ + + G+DV+ G + ++V F +G +V DG SG DT + +
Sbjct: 403 LFGEEGSDTLSGGAGNDELHAGGGDDVLTGGAGDDVLFGYAGANVLDGGSGNDTIYGGSD 462
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S ++ + ++ + + + + L D + + LI
Sbjct: 463 SDQINAGEGDDLVYAESGDDVIEGGVGN-DALFGGDGNNTIDGGTGHDSIYAGDGDDTLI 521
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDS 401
G D S +G D+ +
Sbjct: 522 GGSGDDKIYSGAGSNTIDAGDGNDLVYAG 550
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 6/161 (3%)
Query: 225 SGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G+D L + T+ GG + + + T ++ G + + + G GND
Sbjct: 1369 GAGNDRLEAGAGNNTVSGGDGDDVLIATGGDDNLSGGAGSDNLNAGNGNNQLFGGDGNDK 1428
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ S +++ +GND SG D F + ++ + N+
Sbjct: 1429 LTSGSGSDLLEGGAGNDALSSGSGNDQLFGGEGNDNLSGGSGDDMLYGEAGNDKLTGG-G 1487
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++L D V L + L G D+
Sbjct: 1488 GNDQLFGGDGDDKLVGSGGNDQLHGDVGNDQLSGGSGNDML 1528
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 57/178 (32%), Gaps = 9/178 (5%)
Query: 200 GSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSS 252
G+ + +Y + ++ GDD +D G +
Sbjct: 883 GTADDQLYGDGGNDTILAAEGDDLVFAGAGDDTVDTGTGDDVVFAGTGSDNIATGAGDDQ 942
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + TI + + G G D V + ++V + GND G G D F
Sbjct: 943 VFGEDGDNTINTGEGKDEIYGGVGADTVYAGTGDDVIYGGDGNDALHGEEGDD--FIDGG 1000
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ I A +++ + + L F + D + + + + +D
Sbjct: 1001 TGSDTISGGVGADLIFGGDGSDTIAGDEGNDLLFGGEGHDQIAGGEGDDQLFGEAGDD 1058
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 54/173 (31%), Gaps = 12/173 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQ 264
+ +GGDD L N + N + + G + +
Sbjct: 1381 NNTVSGGDGDDVLIATGGDDNLSGGAGSDNLNAGNGNNQLFGGDGNDKLTSGSGSDLLEG 1440
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ SGND + G N+ SG+D+ G +G D + ++
Sbjct: 1441 GAGNDALSSGSGNDQLFGGEGNDNLSGGSGDDMLYGEAGNDKLTGGGGNDQLFGGDGDDK 1500
Query: 325 IIVYDANEH-----KQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYED 370
++ N+ D LS + FA D ++ S Y D
Sbjct: 1501 LVGSGGNDQLHGDVGNDQLSGGSGNDMLFAGVGDDKLDGGSGSDELYGGDGAD 1553
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 8/169 (4%)
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
TIY GDDL+ + TL GG E ++ G E N + + + G
Sbjct: 599 DTIYAEDGDDLVIGGVGNDTLYGGAGADRLEGGEGNDALSGGEGNDELLSGSGDNFLDGG 658
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D++ ++V G+D +G D + + + D N+
Sbjct: 659 SGDDIITAQDGDDVLIGGDGHDSIIAGAGDDIIDAGLGNDTIDAGDGNDTVYAQDGNDTI 718
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQDVFES 382
+ L + L Q ID ++ + Y D LI G D+ +
Sbjct: 719 EGGLGN--DLLHGGQGIDHLDGGEGDDTLYGGGGADTLIGGAGNDLVDG 765
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 6/128 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + +A ++++ SG D + G S +V SG+D G G D F
Sbjct: 349 LQGDEGDDVLAGGEGNDTLIAGSGADELDGGSGADVLLAGSGDDTLTGGEGDDKLFGEEG 408
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYED 370
S A D L+ + + F + ++ + Y S D
Sbjct: 409 SDTLS----GGAGNDELHAGGGDDVLTGGAGDDVLFGYAGANVLDGGSGNDTIYGGSDSD 464
Query: 371 LIQVIGQD 378
I D
Sbjct: 465 QINAGEGD 472
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 7/125 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + GDD + DL G + I + + G N +
Sbjct: 1226 DDNDSIEAGAGDNIVSGGAGDDTITTGSGHDLIAGGEGDDIIHAGEGH-NQVSGGAGNDS 1284
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I +++ G G+D++ + +N +GND +G D A +
Sbjct: 1285 IIAGIGSDTISGGEGHDIIDAGNGDNQISGDAGNDTLIAGAGSDVISGGAGDDTIRAGDG 1344
Query: 322 ENAII 326
N +
Sbjct: 1345 HNTVT 1349
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ GDD L + G + + D+ + S G N + +
Sbjct: 1480 NDKLTGGGGNDQLFGGDGDDKLVGSG-GNDQLHGDVGNDQLS---GGSGNDMLFAGVGDD 1535
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ G SG+D + G + SG+D+ G SG DT
Sbjct: 1536 KLDGGSGSDELYGGDGADTLAGGSGDDILFGDSGADTLDGGTGVDT 1581
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 14/224 (6%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYG------APKGSLGNNIYKIEVQQ--KDSPFIQTIY 223
D FGY ++ IYG G + +Y + ++
Sbjct: 435 GDDVLFGYAGANVLDGGSGNDTIYGGSDSDQINAGEGDDLVYAESGDDVIEGGVGNDALF 494
Query: 224 DSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
G++ +D ++ G + + I + TI + V D
Sbjct: 495 GGDGNNTIDGGTGHDSIYAGDGDDTLIGGSGDDKIYSGAGSNTIDAGDGNDLVYAGVDAD 554
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ S ++V F +G+D +G D + A + ++ I D ++ +
Sbjct: 555 TIDAGSGDDVIFSDAGDDTVIAGAGNDQIYAGAGDDVITGGEGDDTIYAEDGDDLVIGGV 614
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ A L ++L+ G + +
Sbjct: 615 GNDTLYGGAGADRLEGGEGN-DALSGGEGNDELLSGSGDNFLDG 657
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 61/207 (29%), Gaps = 26/207 (12%)
Query: 186 SDIVAVQKIYGAPKGSLGNN--IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
DI+ + + G GN+ I I I D+G D I G
Sbjct: 1264 DDIIHAGEGHNQVSGGAGNDSIIAGIGSDTISGGEGHDIIDAGNGDN----QISGDAGND 1319
Query: 244 DLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVI---------GNSANNVFFESS 293
L + S I G + TI +V G G+D +I G + N+ +
Sbjct: 1320 TLIAGAGSDVISGGAGDDTIRAGDGHNTVTGGEGDDSIIAGEGHDNLSGGAGNDRLEAGA 1379
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GN+ G G D + + + N +L D
Sbjct: 1380 GNNTVSGGDGDDVLIATGGDDNLSGGAGSDNLNAGNGNN----------QLFGGDGNDKL 1429
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +LE A + L G D
Sbjct: 1430 TSGSGSDLLEGGAGNDALSSGSGNDQL 1456
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 55/173 (31%), Gaps = 4/173 (2%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T+ G+D + + G + ID ++ S G N+ ++ +++ SG+
Sbjct: 1200 GNNTVEGGSGEDTI---ITGSGHDTIDGGDDNDSIEAGAGDNI-VSGGAGDDTITTGSGH 1255
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D++ G +++ G++ G +G D+ S + I + +
Sbjct: 1256 DLIAGGEGDDIIHAGEGHNQVSGGAGNDSIIAGIGSDTISGGEGHDIIDAGNGDNQISGD 1315
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + A + S +I + H G
Sbjct: 1316 AGNDTLIAGAGSDVISGGAGDDTIRAGDGHNTVTGGEGDDSIIAGEGHDNLSG 1368
Score = 41.3 bits (95), Expect = 0.56, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 13/99 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSG 303
+ G E T+ +++ G +GND ++G ++ GND G +G
Sbjct: 268 LTGGEGQDTLMGGDDNDTLAGGAGNDTLMGELGDDTLEGGDGDDLLIGDDGNDTLIGGAG 327
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
D+ + Y + D L+ E
Sbjct: 328 HDSLLGGKGIDELS----GGSGNDYLQGDEGDDVLAGGE 362
Score = 41.3 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 65/230 (28%), Gaps = 40/230 (17%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ TIY G D L D L GG + + E + + G N T+
Sbjct: 805 DDTLLGEAGNDTIYAGAGSDSLLGGAGDDKLYGGDGDDELIGGEGYDELYGGAGNDTLYA 864
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-------------------------- 298
+ G G+D +IG +A++ + GND
Sbjct: 865 ENEAGLLAGGEGDDKLIGGTADDQLYGDGGNDTILAAEGDDLVFAGAGDDTVDTGTGDDV 924
Query: 299 -DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-----KQDFL---SDVERLRFADQ 349
+G D A +N I + + D + + + + D
Sbjct: 925 VFAGTGSDNIATGAGDDQVFGEDGDNTINTGEGKDEIYGGVGADTVYAGTGDDVIYGGDG 984
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ ++ + + +G D+ EG D+ F
Sbjct: 985 NDALHGEEGDDFIDGGTGSDTISGGVGADLIFGGDGSDTIAGDEGNDLLF 1034
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 24/61 (39%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND+++G +++ +GND+ DG SG D + I+ + D
Sbjct: 7 NDLIVGTDSDDHIEGLTGNDIIDGRSGDDYLVGGEGDDTISGQEGRDFILGDQGLGEQSD 66
Query: 337 F 337
Sbjct: 67 T 67
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 21/54 (38%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N I + + G +GND++ G S ++ G+D G G D
Sbjct: 7 NDLIVGTDSDDHIEGLTGNDIIDGRSGDDYLVGGEGDDTISGQEGRDFILGDQG 60
Score = 37.4 bits (85), Expect = 7.2, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 29/78 (37%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG+ +D + G + N++ SG+D G G DT +
Sbjct: 8 DLIVGTDSDDHIEGLTGNDIIDGRSGDDYLVGGEGDDTISGQEGRDFILGDQGLGEQSDT 67
Query: 329 DANEHKQDFLSDVERLRF 346
E+ + VE+ F
Sbjct: 68 PVIENAETTAWGVEQQVF 85
>gi|164664904|gb|ABY65885.1| matrix metalloproteinase 23 [Sus scrofa]
Length = 265
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 52/142 (36%), Gaps = 32/142 (22%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--IHSDI 79
W ++ + Y+ + LS + + +A A WS V +F E + SD+
Sbjct: 11 RWDHFNLTYRILSFPRNLLSP-----SETRRGLA-AAFRMWSDVSPFSFREVAPEQPSDL 64
Query: 80 KFISSNNGYV-------------CTPRYDSRYFME---INFDKADVWRYGIGKGTILS-- 121
+ + T +F I+FD ++ W G + +
Sbjct: 65 RIGFYPVNHTDCLVSPPHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGV 124
Query: 122 ------HNALHEIGHALGLMHP 137
H A HEIGHALGLMH
Sbjct: 125 WLTDPVHVAAHEIGHALGLMHS 146
>gi|157688250|gb|ABQ02442.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFES 382
D LS + L + +IL + L I
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
>gi|3253294|gb|AAC24352.1| hemolysin [Escherichia coli]
Length = 998
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 248 ESWSSI-GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ I G + N I + + + G G+D + G ++ F SGND G G +
Sbjct: 718 GKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNY 777
Query: 307 FFYYAPSY 314
+ +
Sbjct: 778 LTGGSGND 785
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 15/146 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++G +D G N++F + GND +G+ G D + Y
Sbjct: 703 VEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDD----YISGGQGDD 758
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFES 382
D LS + L + +IL + L I
Sbjct: 759 QLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGE 818
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ G D Y+Y +Y
Sbjct: 819 GNDYLNGGFGN------DIYVYRQNY 838
>gi|255261462|ref|ZP_05340804.1| S-layer-RTX protein [Thalassiobium sp. R2A62]
gi|255103797|gb|EET46471.1| S-layer-RTX protein [Thalassiobium sp. R2A62]
Length = 643
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N TI + + G SGND + G +++ G+D+ G G DT F
Sbjct: 514 LYGNAGNDTIYGADDNDEIYGDSGNDTLDGGIDDDLVNGGRGDDLIIGGQGDDTLFGGKG 573
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ + + + ++ DF + + D + + Q
Sbjct: 574 ADTFGFAAGDGSDVI-------TDFAVGTDAIALTGLTTDDLFLSQ 612
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 38/131 (29%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + + G G+D + G ++ +GND G G D +
Sbjct: 313 GRAGDDALMGGNDADRLYGGEGDDALYGCDGSDFLCGGTGNDELRGGGGADRIIGGLGND 372
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
L R + I E D + L F D + Y + D I
Sbjct: 373 LVDGGRGNDIISTGHVIETDADGTVGIPNLGFPGILPDDTDPNDDKDTVYAGAGHDRITT 432
Query: 375 IGQDVFESMKH 385
D H
Sbjct: 433 GDDDDIIYAGH 443
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 1/129 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + I+ + V G SG+DV+ GN+ N+ ++G+D G G D
Sbjct: 166 TLFGGAGDDFISGGGGADLVAGGSGDDVLKGNNGNDTLMGNAGDDSLFGGDGNDLLCAGE 225
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + I + N+ + + + + L + + L
Sbjct: 226 GDDTVSGGKGADRIYADNGNDLVHGG-DGEDEIHGGNGDDELYGDSGHDELHGNSGDDSL 284
Query: 372 IQVIGQDVF 380
I G D
Sbjct: 285 IGGQGNDKL 293
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 55/169 (32%), Gaps = 13/169 (7%)
Query: 225 SGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ G+D L D +L GG N + E ++ G + I + V G G D
Sbjct: 197 NNGNDTLMGNAGDDSLFGGDGNDLLCAGEGDDTVSGGKGADRIYADNGNDLVHGGDGEDE 256
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-----FENAIIVYDANEHK 334
+ G + ++ + SG+D G+SG D+ + + F
Sbjct: 257 IHGGNGDDELYGDSGHDELHGNSGDDSLIGGQGNDKLRGDDGDDRLFGGRGKDLLIGRAG 316
Query: 335 QDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L D +RL + L ++L G D
Sbjct: 317 DDALMGGNDADRLYGGEGDDALYGCDGSDFLCGGTGNDELRGGGGADRI 365
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 33/87 (37%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + N I + +++ G +D+V G +++ G+D G G DTF + A
Sbjct: 522 TIYGADDNDEIYGDSGNDTLDGGIDDDLVNGGRGDDLIIGGQGDDTLFGGKGADTFGFAA 581
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL 338
I F D L
Sbjct: 582 GDGSDVITDFAVGTDAIALTGLTTDDL 608
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 8/136 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G ++ TI + + G +D + G + ++ G D+ G SG D
Sbjct: 140 LSGTGRSDTIYGRDGDDRIYGRQSDDTLFGGAGDDFISGGGGADLVAGGSGDDVLKGNNG 199
Query: 313 SYLYKIYRFENAIIVYDANE-----HKQDFLS---DVERLRFADQCIDSVNVKQRSILEY 364
+ ++++ D N+ D +S +R+ + +
Sbjct: 200 NDTLMGNAGDDSLFGGDGNDLLCAGEGDDTVSGGKGADRIYADNGNDLVHGGDGEDEIHG 259
Query: 365 TASYEDLIQVIGQDVF 380
++L G D
Sbjct: 260 GNGDDELYGDSGHDEL 275
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 19/54 (35%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
I N + + V G G D +I ++ +GND G G D
Sbjct: 439 IYAGHGNDIVDAGFDDDFVSGGRGADFIIAGEGSDFVKGGTGNDTIYGGLGPDR 492
>gi|224827303|ref|ZP_03700395.1| outer membrane adhesin like proteiin [Lutiella nitroferrum 2002]
gi|224600478|gb|EEG06669.1| outer membrane adhesin like proteiin [Lutiella nitroferrum 2002]
Length = 805
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 7/126 (5%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+DV+ G+ N+V F SGND G +G D + A + + + ++
Sbjct: 661 GDDVLYGSGGNDVMFGGSGNDTLFGQNGNDVLYGGAGNDTLSGGNQADRFVFLASDNGGT 720
Query: 336 DFLSDV-------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D +++ + L +D I+ + + +T S + I + +D F +
Sbjct: 721 DTITNFTATGANADTLDISDLLINYNPATPSTFIHFTESGGNTIVSVDRDGSGGSYGFQD 780
Query: 389 FGLSEG 394
+ G
Sbjct: 781 VAILNG 786
>gi|222445624|ref|ZP_03608139.1| hypothetical protein METSMIALI_01264 [Methanobrevibacter smithii
DSM 2375]
gi|222435189|gb|EEE42354.1| hypothetical protein METSMIALI_01264 [Methanobrevibacter smithii
DSM 2375]
Length = 533
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 18/103 (17%)
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D A ++Y +G E F Y +++D + G H+ GY E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDD----------VKGDGLTHYLVKGYLE 62
Query: 562 GR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
GR S+ F+PD Y +Y D+ + HYI HG EG
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEG 101
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D ++MK++ +G E FD Y +YDD++ G HY+ G EGR
Sbjct: 13 NFDFRKAMKNYKYYGAIE-ESGLFDEKFYSKTYDDVK-------GDGLTHYLVKGYLEGR 64
Query: 436 NPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
P F Y ++ D+ A + H+ G +EG+ +
Sbjct: 65 LPSLDFDPDFYNNNYPDVHRAQLNP-------LLHYIAHGKDEGKIFQYA 107
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 18/105 (17%)
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D A ++Y +G E F Y +++D+ G H+ G
Sbjct: 14 FDFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDVK----------GDGLTHYLVKGYL 61
Query: 477 EGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
EGR + FD Y +Y D+ + HYI HG EG+
Sbjct: 62 EGRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEGK 102
>gi|254485505|ref|ZP_05098710.1| glycerophosphoryl diester phosphodiesterase [Roseobacter sp.
GAI101]
gi|214042374|gb|EEB83012.1| glycerophosphoryl diester phosphodiesterase [Roseobacter sp.
GAI101]
Length = 232
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 7/142 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ + + + GS GNDV++G N+ +G+D G SG D
Sbjct: 58 VAGGPGDDFVSGGSGNDYIFGSDGNDVMMGGQGNDTVGGDAGDDTVSGGSGDDIIDGGFG 117
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV----ERLRFADQCIDSVNVKQRSILEYTASY 368
+ L + ++ + + D + D + L F D V+ Y
Sbjct: 118 NDLLRGGAGQDQFVFAIDADQGIDTIRDFKSSSDILNFTINFTDIVDTGAPG---YADDI 174
Query: 369 EDLIQVIGQDVFESMKHFYEFG 390
+ + + + + G
Sbjct: 175 DAISTITDNGRGSDVILTLDSG 196
>gi|194858381|ref|XP_001969166.1| GG25269 [Drosophila erecta]
gi|190661033|gb|EDV58225.1| GG25269 [Drosophila erecta]
Length = 761
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 30/157 (19%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE--VARWALGEWSKVVDLTFEET 73
++L+ W + + + + + AL W LTF E
Sbjct: 140 YVLQGAKWHKTDLTWSMVNQ----------SMPDAYKARMLVTRALSVWEYHSKLTFREV 189
Query: 74 -SIHSDIKFISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIG---- 115
S +DI+ + + + ++D + +FD + W + G
Sbjct: 190 YSDQADIQILFARRQHGDGYQFDGPGQVLAHAFYPSEGRGGDAHFDADETWNFDSGTHNR 249
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+GT + ALHE+GH+LGL H + D D
Sbjct: 250 RGTNFLNVALHELGHSLGLGHSSDPKAVMFAWYQDID 286
>gi|89068268|ref|ZP_01155678.1| hypothetical protein OG2516_02364 [Oceanicola granulosus HTCC2516]
gi|89046185|gb|EAR52243.1| hypothetical protein OG2516_02364 [Oceanicola granulosus HTCC2516]
Length = 274
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + T+ + + + G SG+D + GN + SG+D G G D A
Sbjct: 125 NIKGNSGDDTLKGGSGDDKIKGGSGDDFIKGNRGEDRLDGGSGDDRVRGGKGDDRIVVSA 184
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL 338
++ + D +
Sbjct: 185 GEDSIDGGSGDDTFVFKKNKIDGLDVI 211
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 8/140 (5%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GGDD + DL + G + +I ++ + + G SG+D V G
Sbjct: 67 GGDDSIKGRGGD------DLIKGGTGDDTLKGNRGDDSIKGNSGDDRIRGGSGDDNVKGG 120
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
S ++ +SG+D G SG D + K R E+ + ++ + D
Sbjct: 121 SGDDNIKGNSGDDTLKGGSGDDKIKGGSGDDFIKGNRGEDRLDGGSGDDRVRGGKGDDRI 180
Query: 344 LRFADQCIDSVNVKQRSILE 363
+ A + + +
Sbjct: 181 VVSAGEDSIDGGSGDDTFVF 200
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 32/142 (22%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSS----------------------------IGGYEK 258
G D+ D +Y +++ I G
Sbjct: 9 GADVFDFGPSNDTPSYQKFTIDAYDDEVDYSAPARNYIGTAGDNTIRGTMREDKIEGLGG 68
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ +I + + G +G+D + GN ++ +SG+D G SG D + K
Sbjct: 69 DDSIKGRGGDDLIKGGTGDDTLKGNRGDDSIKGNSGDDRIRGGSGDDNVKGGSGDDNIK- 127
Query: 319 YRFENAIIVYDANEHKQDFLSD 340
N+ D +
Sbjct: 128 ---GNSGDDTLKGGSGDDKIKG 146
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 11/140 (7%)
Query: 202 LGNNIYKIEVQQKDSPF-IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G +++ + TI D D + + T ++I G +
Sbjct: 8 AGADVFDFGPSNDTPSYQKFTI------DAYDDEVDYSAPARNYIGTAGDNTIRGTMRED 61
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +S+ G G+D++ G + ++ + G+D G+SG D + K
Sbjct: 62 KIEGLGGDDSIKGRGGDDLIKGGTGDDTLKGNRGDDSIKGNSGDDRIRGGSGDDNVKGGS 121
Query: 321 FENAIIVYDANEHKQDFLSD 340
++ I D L
Sbjct: 122 GDDNI----KGNSGDDTLKG 137
>gi|283851789|ref|ZP_06369067.1| Hemolysin-type calcium-binding region [Desulfovibrio sp. FW1012B]
gi|283572909|gb|EFC20891.1| Hemolysin-type calcium-binding region [Desulfovibrio sp. FW1012B]
Length = 234
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMT----IAQHTVIESVVGSSGNDVVIGNSAN 286
L + I++ ++S+ + ++ + + ++ G GND ++GN N
Sbjct: 72 LAGSSSTAAPASINVLDMAYSNYATLQNSVASPWMMVGGSGNDAFYGGYGNDAIVGNDGN 131
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ G + DG SG DT F +Y + + V A + Q + ++
Sbjct: 132 DTLGAMFGTNWIDGGSGNDTLFAGLTPSVYIGGSGTDTLAVASAPGYLQLSKTTIDLY 189
>gi|88809232|ref|ZP_01124741.1| RTX toxins and related Ca2+-binding protein [Synechococcus sp. WH
7805]
gi|88787174|gb|EAR18332.1| RTX toxins and related Ca2+-binding protein [Synechococcus sp. WH
7805]
Length = 394
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 70/186 (37%), Gaps = 15/186 (8%)
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMV--SDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+ SV +Y S + F Y T + + + ++ Y G+ ++ ++
Sbjct: 185 YAQSVNTY-----SRISPVFSYPNTNSLCSDEFLTIEGFYKLEGGTTSADLLELPSTGLS 239
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
I GG D + + D+ S E TI ++ + +VG
Sbjct: 240 QYDDILICGYGGGDTIKGSTAN------DVLEAGDSG-SSNENGATIYAYSGSDRLVGGP 292
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G ++V +GND+ +G SG + + A + I ++ D ++
Sbjct: 293 GNDQLDGGDGDDVLISGAGNDILNGGSGDNQYLAGAGK-NFVIGGTGLDVVFLDQSKADV 351
Query: 336 DFLSDV 341
L++
Sbjct: 352 SGLANC 357
>gi|312883277|ref|ZP_07743003.1| putative RTX-family protein-10 [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368893|gb|EFP96419.1| putative RTX-family protein-10 [Vibrio caribbenthicus ATCC BAA-2122]
Length = 2219
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 11/150 (7%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGSSGNDVVIGN 283
G+D L L ++ + + H + IE V+GS +D IGN
Sbjct: 1505 GEDTLSLRSTYSHHQDSGETQGAYVDLSLGNARASHLNHIEVSGIEHVIGSMRDDKFIGN 1564
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--V 341
N F GND G G DT + + + + ++ I+ DFLSD V
Sbjct: 1565 DEINHFIGYEGNDYLRGHKGNDTLAGGRGTDILRGDQGSDSYII-----QADDFLSDKSV 1619
Query: 342 ERLR-FADQCIDSVNVKQRSILEYTASYED 370
+ ++ F D + K + SY
Sbjct: 1620 DTIQNFDDHFQKNWQEKYDYFYDLGISYRT 1649
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 13/131 (9%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA---------PSYLYKI 318
++ V G+S D + GN N +G D G G D A S +Y +
Sbjct: 1878 VDHVKGASSADTIFGNQNENWIHGGAGFDNLHGHDGDDVLIGGADGGRLAGGNGSDVYLV 1937
Query: 319 YRFENAIIV-YDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
E+ +++ + + +D + +E+LR+ + + +E +
Sbjct: 1938 QGNESRLVIDTTSTDEVRDTIRFTNGLEQLRYTKSAGNLKFQYFDTDIEVADLSREAESA 1997
Query: 375 IGQDVFESMKH 385
G V H
Sbjct: 1998 FGVSVINQDNH 2008
>gi|221634587|ref|YP_002523275.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
gi|221163460|gb|ACM04422.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
Length = 965
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 8/127 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I + GD ++L G ID S S ++ + + + + N ++
Sbjct: 776 IVNQAGDSTIELAGGG-----IDTVQSSLSWTLAANVERLVLTGGAALSGTGNGLSN-LL 829
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFLS 339
IGN N +GND G G D A + R I A+ + D +
Sbjct: 830 IGNGGANRLSGGAGNDTLSGGGGADLLIGGAGRDSFVFNTRPGPGAIDRIADFNVADDVI 889
Query: 340 DVERLRF 346
+E F
Sbjct: 890 HLENAVF 896
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 50/170 (29%), Gaps = 20/170 (11%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--------- 295
L + GG ++ + A IE G GND + G N++ +GN
Sbjct: 707 LLDGTLRGSGGNDRLIGTANAERIE---GFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGR 763
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSV 354
D G +G D + V + ++VERL +
Sbjct: 764 DRMVGGTGNDRYIVNQAGDSTIELAGGGIDTVQSSLSW--TLAANVERLVLTGGAALSGT 821
Query: 355 NVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRD-ITFDS 401
++L L G D G GRD F++
Sbjct: 822 GNGLSNLLIGNGGANRLSGGAGNDTLSGGGGADLLIGGA--GRDSFVFNT 869
>gi|186686599|ref|YP_001869795.1| phytase [Nostoc punctiforme PCC 73102]
gi|186469051|gb|ACC84852.1| phytase [Nostoc punctiforme PCC 73102]
gi|326635604|gb|ADZ99371.1| beta-propellar phytase [Nostoc punctiforme PCC 73102]
Length = 1417
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 34/242 (14%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV-----AVQKIYGAPKGSL 202
G D+ + ++ + ++ ++ A IV A Q I + G
Sbjct: 1183 GDGADFVEGTEGNTIQAGNDDDTVLVGSNSSVSAGDGNDQIVIGQNGAAQNI--SADGGN 1240
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+++ + ++ ++ + G+D L + S S+ G N T+
Sbjct: 1241 GDDVITVVEANGNNN----LFGAEGNDTLTV------------IEGSRQSLFGGLGNDTL 1284
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYAPSYLYKIYRF 321
+ + G SG+D + N+ N+ F G+DV G G + A + + I
Sbjct: 1285 TSNGSNNRLYGGSGDDKIFSNT-NDSLFGGDGDDVLFAGQGGSNRLSGGAGADQFWIANA 1343
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + DF + ++++ + + + Q S L D + G
Sbjct: 1344 ----SLPSSKNIITDFTAGIDKI-----GLGGIGITQFSGLTLLQQGSDTLVKAGNTELA 1394
Query: 382 SM 383
S+
Sbjct: 1395 SL 1396
>gi|224827171|ref|ZP_03700267.1| outer membrane adhesin like proteiin [Lutiella nitroferrum 2002]
gi|224600680|gb|EEG06867.1| outer membrane adhesin like proteiin [Lutiella nitroferrum 2002]
Length = 558
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T S +++ G T+ + + G +GND + G + ++ SG+D+ +G SG DT
Sbjct: 3 TSSDTTVVGTSSADTLNGGAGNDVLSGGAGNDFLNGGAGSDTLDGGSGSDLLNGGSGNDT 62
Query: 307 FFY--YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
Y S IY + I N ++LS+
Sbjct: 63 LIYTLSENSGSTDIYTGGSGIDTVQLNLTSSEWLSN 98
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 8/117 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+S + V+G S+ + +GNDV G +G D A S +
Sbjct: 2 ATSSDTTVVGTSSADTLNGGAGNDVLSGGAGNDFLNGGAGSDTLD----GGSGSDLLNGG 57
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D L ++ + S ++ + + V + + + +
Sbjct: 58 SGNDTL----IYTLSENSGSTDIYTGGSGIDTVQLNLTSSEWLSNTVQQEVARYVQH 110
>gi|29465758|gb|AAL96835.1| matrix metalloproteinase 13 [Ovis aries]
Length = 174
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 44/138 (31%), Gaps = 22/138 (15%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F + +
Sbjct: 34 RTLKWSKMNLTYRIVNYTPDLTHSEV-------EKAFRKAFKVWSDVTPLNFTRIHNGTA 86
Query: 78 DIKFISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGKGTILSHNA 124
DI + +D Y + +F + W KG L A
Sbjct: 87 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFGDDETWT-SSSKGYNLFLVA 145
Query: 125 LHEIGHALGLMHPGSYNG 142
HE GH+LGL H
Sbjct: 146 AHEFGHSLGLDHSKDPGA 163
>gi|163735930|ref|ZP_02143357.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
gi|161390747|gb|EDQ15089.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
Length = 1009
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 15/153 (9%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ +T+ G D L+ TL G I+L T N E+VV
Sbjct: 451 SNTAFETLDGGTGIDTLNTTLFNGTYE-INLVTG--------VTNFAPESFVNFENVVTG 501
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--- 331
+GN + G NV SGND + +G DT A + + + I + D N
Sbjct: 502 NGNTTITGTVGANVITTGSGNDTVNAGAGNDTINTGAGNDTVEASSGSDTIFLGDGNDTA 561
Query: 332 -EHKQDFLSD--VERLRFADQCIDSVNVKQRSI 361
D + + L FA + +
Sbjct: 562 TSSGTDTIFGEAGDDLIFAGLGLPETLDGGTGV 594
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 21/125 (16%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS-------------- 302
N T+ ++++G SG+D + GN ++ F SGND G
Sbjct: 812 TGNDTLFGGANEDTLLGGSGDDFLQGNQQDDELFGQSGNDRLFGGDGFDFLNGGIGDDRL 871
Query: 303 ----GLDTFFYYAPSYLYKIYRFENAII---VYDANEHKQDFLSDVERLRFADQCIDSVN 355
G DT + + + + V D+N +D + ++ + A+ I V+
Sbjct: 872 EGNNGRDTLVGGTGADILIGGALGDTFVFSSVADSNLASRDTIVGIDGIGVANGDIIDVS 931
Query: 356 VKQRS 360
Sbjct: 932 AIDAD 936
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 74/253 (29%), Gaps = 39/253 (15%)
Query: 199 KGSLGNNIYKIEVQQKDSPF-------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+L N Y + + + F + I G+D L L N +D +
Sbjct: 598 NTTLFNGSYVVNLATGLTNFAGEVFTNFENIISGSGNDEL---LGTSSANEMDGGAGND- 653
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS------------------ 293
I G N + + + G GND + G N++ + +
Sbjct: 654 RILGLGGNDELIGGLGSDILNGGDGNDEIDGGDGNDIMYGGTGNDDMEGGDGDDLLIGND 713
Query: 294 GNDVFDGSSGLDTFFYYAP--------SYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
GND+ +G G D F N ++ D + + ++
Sbjct: 714 GNDMMEGGLGNDVFRGGTGVDIIDGDEGDDEAFGGDGNDVLRGGDGNDLMDGSAGDDSIQ 773
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM--KHFYEFGLSEGRDITFDSYL 403
D V IL+ + ++L G D+ G +E +
Sbjct: 774 GGDGNDILVGQIGNDILQGDSGADELRGGGGDDLLNGGTGNDTLFGGANEDTLLGGSGDD 833
Query: 404 YLGSYDDLRNVFG 416
+L +FG
Sbjct: 834 FLQGNQQDDELFG 846
Score = 42.8 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 22/131 (16%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE------------------SSG 294
+ G + N + +S+ G GND+++G N++ +G
Sbjct: 754 LRGGDGNDLMDGSAGDDSIQGGDGNDILVGQIGNDILQGDSGADELRGGGGDDLLNGGTG 813
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G + DT + + N + D L + F + I
Sbjct: 814 NDTLFGGANEDTLLGGSGDD----FLQGNQQDDELFGQSGNDRLFGGDGFDFLNGGIGDD 869
Query: 355 NVKQRSILEYT 365
++ + +
Sbjct: 870 RLEGNNGRDTL 880
Score = 40.1 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 21/210 (10%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ G+ + +++D + G + +D + I
Sbjct: 355 GTTGDGRILFSWLAQGGEIFASVWDPRPSVIDPDDFDGQRAHVLDSDV-----ITTGIGG 409
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND----------VFDGSSGLDTFFY 309
T+ ++V G G+D++ +S +F GND DG +G+DT
Sbjct: 410 STVLAGVGSKTVFGQGGDDIINASSGGGEYFGGGGNDIIFASNTAFETLDGGTGIDTLNT 469
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ Y+I +V + + E + + +++ + +
Sbjct: 470 TLFNGTYEIN------LVTGVTNFAPESFVNFENVVTGNGNTTITGTVGANVITTGSGND 523
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ G D + S G D F
Sbjct: 524 TVNAGAGNDTINTGAGNDTVEASSGSDTIF 553
>gi|218532383|ref|YP_002423199.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|218524686|gb|ACK85271.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
Length = 475
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 2/138 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G T+ + + G GND + G + ++ + +GND DG SG D + A
Sbjct: 336 NRDGTAGAETMTGSNAADDLDGMDGNDTLNGLAGDDALYGGAGNDRLDGGSGTDHLWGGA 395
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + V D D + + + + + + + + +
Sbjct: 396 GADRFAFKAGNGTDWVEDFETGGSAPDAIEISRSMLGSFDAVLAAAQDVGTDVAIRSGSD 455
Query: 370 DLIQVIGQDVFESMKHFY 387
L Q S H
Sbjct: 456 TLWLADTQKAELSAGHIL 473
>gi|10120630|pdb|1CXV|A Chain A, Structure Of Recombinant Mouse Collagenase-3 (Mmp-13)
gi|10120631|pdb|1CXV|B Chain B, Structure Of Recombinant Mouse Collagenase-3 (Mmp-13)
Length = 164
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 45/138 (32%), Gaps = 22/138 (15%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 6 RTLKWSQTNLTYRIVNYTPDMSHSEV-------EKAFRKAFKVWSDVTPLNFTRIYDGTA 58
Query: 78 DIKFISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGKGTILSHNA 124
DI + +D Y + +FD + W KG L A
Sbjct: 59 DIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFIVA 117
Query: 125 LHEIGHALGLMHPGSYNG 142
HE+GH+LGL H
Sbjct: 118 AHELGHSLGLDHSKDPGA 135
>gi|325982593|ref|YP_004294995.1| hypothetical protein NAL212_1996 [Nitrosomonas sp. AL212]
gi|325532112|gb|ADZ26833.1| hypothetical protein NAL212_1996 [Nitrosomonas sp. AL212]
Length = 1231
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 75/218 (34%), Gaps = 20/218 (9%)
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDS--GGDDLLDLT 234
GY A P DI + + + GN Y S I +D +
Sbjct: 918 GYSANPTFVDIDSDGDLDAFVGNNDGNMQFYVNNGLLLTSTVGNDILAGTPSNNDTVTYG 977
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L G NT S +++G + T IE+++GS+ NDV+ G++ NN G
Sbjct: 978 LAIGPVTVSLSNTNSQNTLGAGLDTL-----TAIENIIGSAFNDVLTGDAKNNALTGRGG 1032
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLR 345
+D +G+ G D + +Y + + +V + D + ++VE L
Sbjct: 1033 HDTLNGAGGADVMAGGFGNDVYTVNVPGD--VVTENFNQGSDKINSSVTYTLPANVENLT 1090
Query: 346 FADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFES 382
+ +I+ L G +
Sbjct: 1091 LTGTGAINGTGNDLANIIIGNTGNNQLDGGAGNNTLTG 1128
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 15/176 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYI-------DLNTESWSSIGGY 256
+ GG D L+ GG N + D+ TE+++
Sbjct: 1014 FNDVLTGDAKNNALTGRGGHDTLNGAGGADVMAGGFGNDVYTVNVPGDVVTENFNQGSDK 1073
Query: 257 EKN-MTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ +T +E++ +G GN N+ ++GN+ DG +G +T +
Sbjct: 1074 INSSVTYTLPANVENLTLTGTGAINGTGNDLANIIIGNTGNNQLDGGAGNNTLTGGLGND 1133
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+K + ++ D N D + + A ++ + I D
Sbjct: 1134 FFKFTTAGHVDVITDYN-VTNDTIQLENAVFTALTVTGTLAAARFRIGANALDAND 1188
>gi|254422799|ref|ZP_05036517.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196190288|gb|EDX85252.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 784
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 8/150 (5%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSS 252
G+ GN+I K T+ G+DLL+ L ++ G + LN + +
Sbjct: 603 GNDGNDILNGGKGNDTLDGGKGNDTLDGGRGNDLLNGGRGLDVLDGGRGNDSLNGGADND 662
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + N T+ + + G +G DV++G+ ++ ND G +G DTF
Sbjct: 663 TLDGGKGNDTLDGGRGNDLLTGGNGRDVLLGSDGDDTLVGGGNNDTLTGGNGRDTFVLSV 722
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ I F++ ++ A LS V
Sbjct: 723 GGGVDTITDFDSKDLIGLAGGLGIGELSFV 752
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 15/177 (8%)
Query: 220 QTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVG 273
++ G+D+L+ L GG N I LN + + + G T+ +++ G
Sbjct: 536 DSLDGGKGNDILNGGRGSDALFGGNGNDI-LNGGADNDSLDGGNGRDTLNGDKGNDTLDG 594
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--------ENAI 325
G+D + GN N++ GND DG G DT + L R N
Sbjct: 595 GRGSDALFGNDGNDILNGGKGNDTLDGGKGNDTLDGGRGNDLLNGGRGLDVLDGGRGNDS 654
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ A+ D + L R +L + + L+ D
Sbjct: 655 LNGGADNDTLDGGKGNDTLDGGRGNDLLTGGNGRDVLLGSDGDDTLVGGGNNDTLTG 711
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 59/194 (30%), Gaps = 12/194 (6%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
L Y + TI + GDD L + L + + G
Sbjct: 477 PNGMRLAGESYVVFGATDIGLSTNTIIGTNGDDTLIGSKN--KDLLFGLAGNDF--LDGR 532
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ ++ + + G G+D + G + N++ + ND DG +G DT +
Sbjct: 533 NNSDSLDGGKGNDILNGGRGSDALFGGNGNDILNGGADNDSLDGGNGRDTLNGDKGNDTL 592
Query: 317 KIYRFENAIIVYDANE-----HKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
R +A+ D N+ D L + L + +L+
Sbjct: 593 DGGRGSDALFGNDGNDILNGGKGNDTLDGGKGNDTLDGGRGNDLLNGGRGLDVLDGGRGN 652
Query: 369 EDLIQVIGQDVFES 382
+ L D +
Sbjct: 653 DSLNGGADNDTLDG 666
>gi|189347360|ref|YP_001943889.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
gi|189341507|gb|ACD90910.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
Length = 4334
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 3/167 (1%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ D + + GG N + + ++ G +N T+ + +++ G GND ++G
Sbjct: 1662 DTLAGDAGNDEVFGGEGNDVLYGDDGADTLSGGTENDTLYGGSENDTLSGDEGNDSLLGG 1721
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++ GND G +G D+ + Y N + D N D L D +
Sbjct: 1722 DGDDTLEGGIGNDELYGDAGDDSLTGGEGDDYLEDYEGNNTLDGGDGN-DTLDALLDADM 1780
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ D ++ + ++ A + L + G
Sbjct: 1781 --QGGEGDDLLSALDNNTMDGGAGNDSLYGDYDNSMQGGEGDDSMSG 1825
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N T+ + + G GND + GN+ ++ SGND +G +G D+ A
Sbjct: 166 FTGTDGNDTLVGTASDDGMYGYGGNDSLRGNAGSDTMDGGSGNDTLNGGAGDDSMTGGAG 225
Query: 313 SYLYKIYRFENAIIVYDAN 331
+ LY + + ++ D
Sbjct: 226 NDLYYVDSAGDEVVEGDGG 244
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 10/148 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLDL-----TLIGGVKNYIDL 245
GA G+ +E + ++ GDD L+ TL GG N
Sbjct: 2062 GANLLHGGDGEDTLEGGSGNDGLYGDADNDSLSGGAGDDYLEDYEGSNTLEGGSGNDTLF 2121
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ E + + + +S+VG SG+D + G +++ +G+D G SG D
Sbjct: 2122 GDGGDDTLTASEGSNVLDGGSGDDSLVGGSGDDTLYGGEGDDLLDGGAGDDQLYGDSGSD 2181
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEH 333
T + + L + ++A+ + +++
Sbjct: 2182 TLYGGDGADLLEGGEGDDALYGDEGDDN 2209
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 51/150 (34%), Gaps = 8/150 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDL----NTESW 250
G+ G+ V + T + GDD + + N DL +
Sbjct: 2298 GSRTMFGGDGDDSFTVTGGSD--VVTEFAGEGDDTVFASVNYTLTDNVEDLVLEETPGAL 2355
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S G N I ++ + G+ G+D + G + N+ +GNDV D SG D
Sbjct: 2356 SGTGNAMDN-RITGNSFDNLLDGADGDDSLYGGAGNDTIAGGAGNDVVDAGSGDDVIVLG 2414
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
A ++ + V + D +
Sbjct: 2415 AGEETVDAGEGDDTVTVTGRELDEADRIQG 2444
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 13/123 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + TI + G++ L GG N ++ G N + +
Sbjct: 271 DFTGTGNSLANTITGNTGNNTL----TGGDGND---------TLNGGTGNDLLEGDAGND 317
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ GS G+D + G N+ +G D DG +G DT + V
Sbjct: 318 NESGSEGDDTLTGGDGNDTLSGGAGYDFIDGGAGNDTLNGGTEDDSMTGGAGNDLYYVDS 377
Query: 330 ANE 332
+
Sbjct: 378 VGD 380
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 66/194 (34%), Gaps = 7/194 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
F T+ DD+L D ++ GG N L + ++++ G E + I
Sbjct: 3671 GAGNDTLTGDFNNTLQGGEADDVLSALDDNSMDGGSGND-TLTGDMFNTMHGGEGDDVI- 3728
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
S+ G GND + + +NV SG+D G SG D+ + + +
Sbjct: 3729 DGFGDNSMYGDGGNDTLTASEGSNVLDGGSGDDSLVGGSGDDSLYGDSGYDSLSGGAGND 3788
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ +D D + F + LE + G D E M
Sbjct: 3789 YLMDWDGINTMDGGEGDDHVVSFGGNS-SLTGGEGDDTLEGWEGNNTMEGGAGNDTLEDM 3847
Query: 384 KHFYEFGLSEGRDI 397
F EG D+
Sbjct: 3848 SGFNTMDGGEGDDL 3861
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 7/137 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYE 257
G GN++Y ++ D GG D ++ T + +Y+ +L + G
Sbjct: 365 TGGAGNDLYYVDSVGD----AVVEEDGGGIDKVNATSDYALGDYVENLTLQGTGDFTGTG 420
Query: 258 KNMTIA--QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ A +T ++ G +G+D + G +++ + ND G +G DT
Sbjct: 421 NTLANALTGNTGSNTLSGDAGSDTLSGGDGDDLLEGGADNDTLTGGNGNDTLDGGEGIDS 480
Query: 316 YKIYRFENAIIVYDANE 332
++ V +++
Sbjct: 481 MTGGTGDDVYFVDSSSD 497
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 6/174 (3%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G+D LD GG + + G N + +++ G G+D
Sbjct: 4077 DTLDGGAGNDQLD----GGEGDDRLYGQTGNDMLEGSSGNDLLYGGAGNDNLQGGEGSDK 4132
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
++ +++ S+G+D+ DG SG DT + + K R N + + D +
Sbjct: 4133 LMSGIGDDLLDGSAGDDMLDGDSGNDTLYGGEGTDSMK-GRAGNDSLDGGFGDDMLDGGA 4191
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ L + L + + G D FG E
Sbjct: 4192 GSDYLDGSYGTDMLYGGDGDDTLVFDRYDAMIDGEDGFDTLVFAGD-DNFGFGE 4244
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 1/125 (0%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G G+D + + +NV SG+D G SG D+ + + + ++ +D
Sbjct: 3249 YGDGGDDTLTASEGSNVLDGGSGDDSLVGGSGDDSLYGESGYDSLSGGAGNDYLMDWDGI 3308
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + + F + L + G D E M F
Sbjct: 3309 NTMDGGEGNDQVVSFGGNS-SVTGAEGDDTLVGWEGNNTMEGGAGNDTLEDMSGFNTMEG 3367
Query: 392 SEGRD 396
EG D
Sbjct: 3368 GEGDD 3372
Score = 51.7 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 65/233 (27%), Gaps = 35/233 (15%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL-----------------------DLTLIGGVKNYI 243
Y+ + T++ GGDD L D TL GG + +
Sbjct: 2105 YEGSNTLEGGSGNDTLFGDGGDDTLTASEGSNVLDGGSGDDSLVGGSGDDTLYGGEGDDL 2164
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G + T+ + + G G+D + G+ ++ GND + SG
Sbjct: 2165 LDGGAGDDQLYGDSGSDTLYGGDGADLLEGGEGDDALYGDEGDDNLDGGYGNDTLEDWSG 2224
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSIL 362
++ + + + + + + Q + L + + + +
Sbjct: 2225 SNSLAGGDGDDILRGGSAFGSTTMSGGDGNDQLSVWGGCNSLDGGEGDDLLYGQESDTTM 2284
Query: 363 EYTASYEDLIQVIGQDVF-----------ESMKHFYEFGLSEGRDITFDSYLY 404
A + + G EG D F S Y
Sbjct: 2285 FGGAGNDSMGGEGGSRTMFGGDGDDSFTVTGGSDVVTEFAGEGDDTVFASVNY 2337
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 8/154 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMT-------IAQHTVIESVVGSSGNDVVIGNS 284
D +L G N +D + GG N +A+ + G GND +
Sbjct: 2002 DDSLSGWDGNSMDGGAGDDTLFGGGYGNTLSGGDGDDLAEAAGDSELYGDGGNDTLRATD 2061
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ G D +G SG D + A + ++ + Y+ + + S + L
Sbjct: 2062 GANLLHGGDGEDTLEGGSGNDGLYGDADNDSLSGGAGDDYLEDYEGSNTLEGG-SGNDTL 2120
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++L+ + + L+ G D
Sbjct: 2121 FGDGGDDTLTASEGSNVLDGGSGDDSLVGGSGDD 2154
Score = 50.5 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 51/167 (30%), Gaps = 13/167 (7%)
Query: 232 DLTLIGGVKNYID-------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
D +L G N +D L+ + + +A+ + G GND +
Sbjct: 3037 DDSLSGWEGNTMDGGAGDDTLSGGGYGNTLSGGDGDDLAEAAGDSELYGDGGNDTLRATE 3096
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN------AIIVYDANEHKQDFL 338
N+ + +G D +G SG D + A + ++ +
Sbjct: 3097 GANLLYGGAGEDTLEGGSGNDGLYGDADNDSLSGGAGDDYLEDYEGSNTLEGGSGNDTLY 3156
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D E + D ++ +++ A + L + +
Sbjct: 3157 GDSEDSMSGGEGDDLLDGWMSELMDGGAGNDTLTGDMFNTMQGGEGD 3203
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 54/165 (32%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ F+ + G D+ + G L S S +
Sbjct: 102 CNVGAGSAGKSFVNKLSAFTGADVAASSNKTGRGGDWLLEVASGSIESDGAVFASSGYSH 161
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ G+ GND ++G ++++ + GND G++G DT + + ++++
Sbjct: 162 TLDLFTGTDGNDTLVGTASDDGMYGYGGNDSLRGNAGSDTMDGGSGNDTLNGGAGDDSMT 221
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N+ + E + ID VN L L
Sbjct: 222 GGAGNDLYYVDSAGDEVVEGDGGGIDKVNAAIDYALGDYVENLTL 266
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 8/180 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSI-GGYEKNMT 261
+ + + T+ G+D LD + GG+ N + L+ WS + G E + T
Sbjct: 3955 SFDNELNGAGGNDTLQGGAGNDELDGGDGEDVVYGGIGNDL-LDGGDWSDVLYGDEDDDT 4013
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-APSYLYKIYR 320
+ +++ G +GND + G + G+D G G Y A +
Sbjct: 4014 LRGGAYHDTLSGGAGNDSLHGGYDFDSLLGGDGDDTLYGGDGYFGMAYDPATDSWAPGWI 4073
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + A + D +RL +L A ++L G D
Sbjct: 4074 AGDDTLDGGAGNDQLDGGEGDDRLYGQTGNDMLEGSSGNDLLYGGAGNDNLQGGEGSDKL 4133
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 21/157 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN------------------VFFESSG 294
+ G + T+ ++V G +GNDV+ G + N+ + SG
Sbjct: 2890 VTGGTGDDTLLTGAGSDTVDGGAGNDVIDGGAGNDSLSGEEGDDSLGGGSGDDMLEGGSG 2949
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND DGS+G D+ + + D + + D +
Sbjct: 2950 NDSLDGSAGDDSLAGGEGDDYLE---DNDGFNTLDGGDGNDTLYGLFDADMQGGAGDDLL 3006
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + ++ A + L + G
Sbjct: 3007 SAFDNNTMDGGAGNDSLYADSDNSMQGGEGDDSLSGW 3043
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+DL ++ G N +D G E + TI ++V+ +G+D + G +
Sbjct: 3556 GNDLDNVITGNGYDNVLD----------GAEGSDTIDGGAGNDTVMSGAGDDELYGGEGD 3605
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + G++ DG +G DT + +
Sbjct: 3606 DYLEDRDGSNSIDGGNGNDTLTGSSGN 3632
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 5/116 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+DL ++ N ++ ++ G N + + V G GND++ G +
Sbjct: 3944 GNDLDNVITGNSFDNELN-GAGGNDTLQGGAGNDELDGGDGEDVVYGGIGNDLLDGGDWS 4002
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+V + +D G + DT A + D L +
Sbjct: 4003 DVLYGDEDDDTLRGGAYHDTLSGGAGNDSL----HGGYDFDSLLGGDGDDTLYGGD 4054
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 220 QTIYDSGGDDLLDLT----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T+ GDDLLD T L G N + TE + + G + + +A + + + G +
Sbjct: 1863 NTLSGGEGDDLLDATASSELYGDGGNDMLQVTEGENLLHGGDGDDVLAGGSGNDELYGDA 1922
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G+D + G ++ ++ G + DG G DT + +
Sbjct: 1923 GDDSLAGGEGDDYLEDNDGFNTLDGGDGNDTLYGLFDAD 1961
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 15/127 (11%)
Query: 204 NNIYKIEVQQKDSPFIQ-TIYDSGGDDLL--------------DLTLIGGVKNYIDLNTE 248
N ++ E F ++Y GG+D L D +L+GG +
Sbjct: 3717 NTMHGGEGDDVIDGFGDNSMYGDGGNDTLTASEGSNVLDGGSGDDSLVGGSGDDSLYGDS 3776
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S+ G N + I ++ G G+D V+ N+ G+D +G G +T
Sbjct: 3777 GYDSLSGGAGNDYLMDWDGINTMDGGEGDDHVVSFGGNSSLTGGEGDDTLEGWEGNNTME 3836
Query: 309 YYAPSYL 315
A +
Sbjct: 3837 GGAGNDT 3843
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 9/140 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GDDLLD + + +D ++ + ++ G E ++ +S+ G G+D++ G + +
Sbjct: 4138 GDDLLDGS---AGDDMLDGDSGND-TLYGGEGTDSMKGRAGNDSLDGGFGDDMLDGGAGS 4193
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-----SDV 341
+ S G D+ G G DT + + + ++ + L +
Sbjct: 4194 DYLDGSYGTDMLYGGDGDDTLVFDRYDAMIDGEDGFDTLVFAGDDNFGFGELLTSGVVGI 4253
Query: 342 ERLRFADQCIDSVNVKQRSI 361
E + ++ +
Sbjct: 4254 ELIDLTSGSHALTDITSDDV 4273
Score = 45.1 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 37/89 (41%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L GG N ++ + +++ G E N + SV G+ G+D ++G NN +
Sbjct: 3292 SLSGGAGNDYLMDWDGINTMDGGEGNDQVVSFGGNSSVTGAEGDDTLVGWEGNNTMEGGA 3351
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
GND + SG +T F
Sbjct: 3352 GNDTLEDMSGFNTMEGGEGDDSLNGMSFN 3380
Score = 45.1 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 3/95 (3%)
Query: 271 VVGSSGND---VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ +GND V+ GNS +N + GND G +G D +++ V
Sbjct: 3451 ALTGTGNDLDNVITGNSFDNELNGAGGNDTLQGGAGNDELDGGDGEDFLAGGEGDDSYEV 3510
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
A + + + FA + + +L
Sbjct: 3511 DSAGDLVVEQAGEGHDTVFASLNYTLTDNVEDLVL 3545
Score = 44.7 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+T+ I+ + GN + GNS NNV G D G G DT+ A L +
Sbjct: 524 NLTLEGTDDIDGTGNALGN-TITGNSGNNVLDGKGGADTLIGGDGDDTYVADASDLLVEE 582
Query: 319 YRFENAIIVYDANE 332
+ N
Sbjct: 583 ADGGTDTVTTSLNS 596
Score = 44.7 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 10/140 (7%)
Query: 232 DLTLIGGVKNYID------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
D ++ G + N +D + T +S+ + + + G G+D + G++
Sbjct: 1391 DDSMFGFIANTMDGGDGQDVMTGLFSNTLRGGEGNDTLFGSASNLLDGGDGDDTLEGSN- 1449
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+N +GND G +G + Y + N + D D +
Sbjct: 1450 DNTMEGGAGNDSLYGDAG-NVMAGGQDDDTYMLAGAGNTVTELDG--EGSDTVYASVDYT 1506
Query: 346 FADQCIDSVNVKQRSILEYT 365
D D V V+
Sbjct: 1507 LTDNVEDLVLVEDSVPGSGA 1526
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 12/85 (14%)
Query: 271 VVGSSGND---VVIGNSANNVFFESSGNDVFDGSSGLD---------TFFYYAPSYLYKI 318
V +GND V+ GN A+N GND G +G D + +
Sbjct: 874 AVTGTGNDLDNVITGNEADNTLDGGLGNDTILGGAGNDFIEDMLGSNSLDGGEGDDTIRT 933
Query: 319 YRFENAIIVYDANEHKQDFLSDVER 343
++ +V + Q L E
Sbjct: 934 GSLNDSNVVGGGVGNDQLELLGGEN 958
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 9/162 (5%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G++ ++ N +D ++ G N + T +S+ G G+DV+ N
Sbjct: 1073 GNEQDNVITGNDADNLLD-GAGGNDTLYGLTGNDYLYGGTGDDSIDGGDGDDVLEDNDGA 1131
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRFENAIIVYDANEHKQDFLSD 340
N GND G SG +T + + E + + + D
Sbjct: 1132 NTMLGGEGNDNLFGFSGSNTMDGGSGDDYLYGETNNDMQGGEGDDTLEGSLGNTMDGGDG 1191
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ L ++ ++ Y + D+ GQD+ E
Sbjct: 1192 GDSLYGSESNTLIGGEGDDTL--YGETNNDMQGGDGQDILEG 1231
Score = 41.3 bits (95), Expect = 0.56, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 10/130 (7%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN +NV +S ++ +G+ G DT A + E+ + N
Sbjct: 3943 TGNDLDNVITGNSFDNELNGAGGNDTLQGGAGNDELDGGDGEDVVYGGIGN--------- 3993
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ L D + L A ++ L G D F +G D +
Sbjct: 3994 -DLLDGGDWSDVLYGDEDDDTLRGGAYHDTLSGGAGNDSLHGGYDFDSLLGGDGDDTLYG 4052
Query: 401 SYLYLGSYDD 410
Y G D
Sbjct: 4053 GDGYFGMAYD 4062
Score = 40.5 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 45/140 (32%), Gaps = 21/140 (15%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSSGLDTFFYYAPSYLY 316
++E V SG GN +N + +GND +G +G DT + + L
Sbjct: 1515 VLVEDSVPGSGAVYGYGNELDNEITGNSLGNELGGAAGNDTLNGGNGSDTLYGGDGADLL 1574
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQV 374
+ + E D L E D D + S Y DL+Q
Sbjct: 1575 DGGAGNDELY----GEGDSDTLYGGEGDDLLDGGAGDDELYGDSGSDTLYGGDGADLLQ- 1629
Query: 375 IGQDVFESMKHFYEFGLSEG 394
++ + E G E
Sbjct: 1630 -----GDAGQDSLEGGAGED 1644
Score = 38.6 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 8/171 (4%)
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
DS D +G ++ +YG + Y +D ++ GD
Sbjct: 2176 GDSGSDTLYGGDGADLLEGGEGDDALYGDEGDDNLDGGYG-NDTLEDWSGSNSLAGGDGD 2234
Query: 229 DLL-------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
D+L T+ GG N +S+ G E + + ++ G +GND +
Sbjct: 2235 DILRGGSAFGSTTMSGGDGNDQLSVWGGCNSLDGGEGDDLLYGQESDTTMFGGAGNDSMG 2294
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + F G+D F + G D +A ++ N + + +
Sbjct: 2295 GEGGSRTMFGGDGDDSFTVTGGSDVVTEFAGEGDDTVFASVNYTLTDNVED 2345
Score = 38.2 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E + T+ ++++G +GND + +N G+D S D+
Sbjct: 886 ITGNEADNTLDGGLGNDTILGGAGNDFIEDMLGSNSLDGGEGDDTIRTGSLNDSNVVGGG 945
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSD 340
++ D L
Sbjct: 946 VGNDQLELLGGENTADGG--EGDDTLYG 971
>gi|304394285|ref|ZP_07376208.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Ahrensia sp. R2A130]
gi|303293725|gb|EFL88102.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Ahrensia sp. R2A130]
Length = 508
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 82/237 (34%), Gaps = 20/237 (8%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
+ D + + + ++ V +G + GN+ + + T+ GG D
Sbjct: 202 NGGTDTVYSTLSHTLADNVENVILKFGDNLDATGND---LTNLLAGNAGANTLDGRGGTD 258
Query: 230 LLDLTLIGGVKNYI----DLN---TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
++ + GG YI DL + + + T+ H E++ ++ G
Sbjct: 259 MMLGS--GGNDTYIIDQSDLIIEYAGEGNDTVRADFDYTLLDH--FENLEMGLQANIGTG 314
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ N + GN++ DG +G D A +Y + +A +V + ++ D +
Sbjct: 315 NALANTITGNDGNNILDGGAGTDILIGGAGDDIYILD--NSADLVTETDQGGTDTVMSSA 372
Query: 343 RLRFA--DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + + + +++ + + G EG DI
Sbjct: 373 DIHLSANVEALVLTGNAVTGWGNDQSNHLYGNDGVNVLFGRGGSDYMVGG--EGDDI 427
Score = 45.1 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 26/138 (18%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G G++IY ++ +S + T D GG D + + ++ N E+ G
Sbjct: 341 GGAGDDIYILD----NSADLVTETDQGGTDTV----MSSADIHLSANVEALVLTG----- 387
Query: 260 MTIAQHTVIESVVGSSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ V GND + GN NV F G+D G G D F A
Sbjct: 388 ----------NAVTGWGNDQSNHLYGNDGVNVLFGRGGSDYMVGGEGDDIFIIVAEDGAV 437
Query: 317 KIYRFENAIIVYDANEHK 334
+ V +
Sbjct: 438 DVIGDFTGAGVAGGDRLG 455
Score = 41.3 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 11/117 (9%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ N +++ + +G+ G G D A + +Y + + ++ A
Sbjct: 145 GNANAEYETGDGDDMITDLAGDGRLIGGQGADAMIGGAGNDVYDVENIGD-TVIEQAING 203
Query: 334 KQDFLSDVERLRFADQ----------CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + AD +D+ ++L A