PSIBLAST alignment of GI: 254780384 and protein with PDB id: 1gkc
>gi|21465442|pdb|1GKC|A Chain A, Mmp9-Inhibitor Complex Length = 163
>gi|21465443|pdb|1GKC|B Chain B, Mmp9-Inhibitor Complex Length = 163
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 44/134 (32%), Gaps = 25/134 (18%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
D W ++ I Y + I + A WS V LTF S +D
Sbjct: 8 DLKWHHHNITYWIQNYSEDLPRAVID-------DAFARAFALWSAVTPLTFTRVYSRDAD 60
Query: 79 IKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
I + P + +FD ++W G G+G L
Sbjct: 61 IVIQFGVAEHGDGYPFDGKDGLLAHAFPP--GPGIQGDAHFDDDELWSLGKGQGYSLFLV 118
Query: 124 ALHEIGHALGLMHP 137
A HE GHALGL H
Sbjct: 119 AAHEFGHALGLDHS 132