PSIBLAST alignment of GI: 254780384 and protein with PDB id: 1jiw

>gi|15825671|pdb|1JIW|P Chain P, Crystal Structure Of The Apr-Aprin Complex Length = 470
>gi|157829926|pdb|1AKL|A Chain A, Alkaline Protease From Pseudomonas Aeruginosa Ifo3080 Length = 470
 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 98/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)

Query: 3   NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
           N  P YT ++ A+ +LR+Q              S  F+    D   T  +   DI  L  
Sbjct: 25  NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 84

Query: 49  -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
                   Q  A+ +L  WS V ++ F +            N         +   P    
Sbjct: 85  FSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 144

Query: 97  RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
               +  +  + +         G        HEIGH LGL HPG YN G       D  Y
Sbjct: 145 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 204

Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
             D+   SVMSY+  Q++  D    Y + P++ DI A+QK+YGA      G+ +Y     
Sbjct: 205 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 264

Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
                       S  + +++D+GG+D LD +     +  I+LN ++ S +GG + N++IA
Sbjct: 265 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 323

Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
               +E+ +G SG+D++IGN   NV    +GND+  G  G D    +  +        + 
Sbjct: 324 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDI 381

Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
           A     A +  +DF+S  +++  +           
Sbjct: 382 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 416