PSIBLAST alignment of GI: 254780384 and protein with PDB id: 1jk3

>gi|15988148|pdb|1JK3|A Chain A, Crystal Structure Of Human Mmp-12 (Macrophage Elastase) At True Atomic Resolution Length = 158

 Score = 52.5 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 22/131 (16%)

Query: 23  WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
           W  ++I Y+ +  T      D+           R A   WS V  L F + +   +DI  
Sbjct: 4   WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 56

Query: 82  ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
           + +   +     +              S    + +FD+ + W    G GT L   A+H I
Sbjct: 57  VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHAI 115

Query: 129 GHALGLMHPGS 139
           GH+LGL H   
Sbjct: 116 GHSLGLGHSSD 126